Citrus Sinensis ID: 044442

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520---
MSMATIFHANAVSIESLLNFPATLNVPTKKWHSAFTKIYCSRTLFSLAEIAKAKKGINKVSRSPSYTVVNLQQHDESFKIDQTSLAELVKMKDLDELHKFGGVRGVASALETDFDAGICGSDQDIARRREAFGSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEGWYDGGSILVLFGHCHFSWKQLYTDSTIGDQVPADGLLLDGHSLQVDESSMTGESDHLEVNSSQNPFLFSGTKVADGYARMLATSVGMNTTWGQRMSQISRDNSEQTPLQARLNELTSSTGKIGLAVAFLVLVVLLLRYFTGNTTDENGNQEYNGSKTKVDDIVNAVVGIVAATVTIIVVAIPEGLPLAVTLTLAYSMKRMMADQVMVRKLSACETMGSATTIGTDKTGTLTENRMKVTKFWLGKELVKEADASSVSPNIIKLIQEGVALNTTGSVYRETSVSDVEFSGSPTEKAILSWAVLEMNMDMEEYSAISLAFFVISFMRKQMVKSTYNEDVIIFVNR
ccccccccccccccccccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHcccccHHHHHHHccHHHHHHHHcccccccccccHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEcEEEEEEcEEEEEEcccccccccccccccccEEEEEEccEEEEcccccccccccccccccccEEEEccEEEEEEEEEEEEEEccccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHEEEEEccccHHHHHHHHHHHHHHHHHHcccccccccccHHcccccEEEcccccccccccEEEEEEEEccEEEcccccccccHHHHHHHHHHHHccccccccccccccccEEcccHHHHHHHHHHHHHccccHHHHHccccEEEEccccccEEEEEEEEccEEEEEEc
ccHHHHccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEcccccccccccccHHHHHHHHHHccHHHHHHcccHHHHHHHHcccHHccccccHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHEEEEEEEEEEcccccEEEEEccccccccEEEEEccEEEEEccccccccccEEcccccccEEEEcEEEEcccEEEEEEEcccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEcccccccHcHHHHHHHHHHHHHHHHHHcHccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHccccEEEEcccccccccccEEEEEEEEcccEEEccccccccHHHHHHHHHHHHHccccEEEcccccccEEEEccHHHHHHHHHHHHcccHHHHHHHccEEEEEEcccccccEEEEEEEcccEEEEEc
MSMATIFHANAVSIESllnfpatlnvptkkwhsAFTKIYCSRTLFSLAEIAKAKKginkvsrspsytvvnlqqhdesfkiDQTSLAELVKmkdldelhkfggvrgVASALetdfdagicgsdqDIARRREafgsntykkppskslFYFVVDALKDLTILILLGCAVLSLAFGikehglkegwydgGSILVLFGHchfswkqlytdstigdqvpadgllldghslqvdessmtgesdhlevnssqnpflfsgtkVADGYARMLATSVGmnttwgqrmsqisrdnseqtPLQARLNELTSSTGKIGLAVAFLVLVVLLLRYFtgnttdengnqeyngsktkvddIVNAVVGIVAATVTIIVVAIPEGLPLAVTLTLAYSMKRMMADQVMVRKLSACetmgsattigtdktgtlteNRMKVTKFWLGKElvkeadassvspNIIKLIQEGVALnttgsvyretsvsdvefsgspteKAILSWAVLEMNMDMEEYSAISLAFFVISFMRKQMVKSTYNEDVIIFVNR
MSMATIFHANAVSIESLLNFPATLNVPTKKWHSAFTKIYCSRTLFSLAEIAKAKkginkvsrspSYTVVNLQQHDESFKIDQTSLAELVKMKDLDELHKFGGVRGVASALETDFDAGICGSDQDIARRREAfgsntykkppskSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEGWYDGGSILVLFGHCHFSWKQLYTDSTIGDQVPADGLLLDGHSLQVDESSMTGESDHLEVNSSQNPFLFSGTKVADGYARMLATSVGMNTTWGQRMSQISRDNSEQTPLQARLNELTSSTGKIGLAVAFLVLVVLLLRYFTgnttdengnqeyngsktkvdDIVNAVVGIVAATVTIIVvaipeglpLAVTLTLAYSMKRMMADQVMVRKLSACetmgsattigtdktgtltenRMKVTKFWLGKELVkeadassvspNIIKLIQEGVALNTTGSVYRETsvsdvefsgsptEKAILSWAVLEMNMDMEEYSAISLAFFVISFMRKQMvkstynedviifvnr
MSMATIFHANAVSIESLLNFPATLNVPTKKWHSAFTKIYCSRTLFSLAEIAKAKKGINKVSRSPSYTVVNLQQHDESFKIDQTSLAELVKMKDLDELHKFGGVRGVASALETDFDAGICGSDQDIARRREAFGSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEGWYDGGSILVLFGHCHFSWKQLYTDSTIGDQVPADGLLLDGHSLQVDESSMTGESDHLEVNSSQNPFLFSGTKVADGYARMLATSVGMNTTWGQRMSQISRDNSEQTPLQARLNELTSSTGKIGlavaflvlvvlllRYFTGNTTDENGNQEYNGSKTKvddivnavvgivaatvtiivvaiPEGLPLAVTLTLAYSMKRMMADQVMVRKLSACETMGSAttigtdktgtltENRMKVTKFWLGKELVKEADASSVSPNIIKLIQEGVALNTTGSVYRETSVSDVEFSGSPTEKAILSWAVLEMNMDMEEYSAISLAFFVISFMRKQMVKSTYNEDVIIFVNR
****TIFHANAVSIESLLNFPATLNVPTKKWHSAFTKIYCSRTLFSLAEIAKAKKGINKVSRSPSYTVVNLQQHDESFKIDQTSLAELVKMKDLDELHKFGGVRGVASALETDFDAGICGSDQDIA****************KSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEGWYDGGSILVLFGHCHFSWKQLYTDSTIGDQVPADGLLLD**************************FLFSGTKVADGYARMLATSVGMNTTW***************************TGKIGLAVAFLVLVVLLLRYFTGNTT**********SKTKVDDIVNAVVGIVAATVTIIVVAIPEGLPLAVTLTLAYSMKRMMADQVMVRKLSACETMGSATTIGTDKTGTLTENRMKVTKFWLGKELVKEADASSVSPNIIKLIQEGVALNTTGSVYRETSVSDVEFSGSPTEKAILSWAVLEMNMDMEEYSAISLAFFVISFMRKQMVKSTYNEDVIIFV**
**********AVSIE***************WHSAFTKIYCSRTL********************************SFKIDQTSLAELVKMKDLDELHKFGGVRGVASALETDFDAGICGSDQDIARRREAFGSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEGWYDGGSILVLFGHCHFSWKQLYTDSTIGDQVPADGLLLDGHSLQVDESSMTGESDHLEVNSSQNPFLFSGTKVADGYARMLATSVGMNTTWGQR*************LQARLNELTSSTGKIGLAVAFLVLVVLLLRYFTGNTTDENGNQEYNGSKTKVDDIVNAVVGIVAATVTIIVVAIPEGLPLAVTLTLAYSMKRMMADQVMVRKLSACETMGSATTIGTDKTGTLTENRMKVTKFWLGKELV**********NIIKLIQEGVALNTTGSVYR**SV*D*EFSGSPTEKAILSWAVLEMNMDMEEYSAISLAFFVISFMRKQMVKSTYNEDVIIFVN*
MSMATIFHANAVSIESLLNFPATLNVPTKKWHSAFTKIYCSRTLFSLAEIAKAKKGINKVSRSPSYTVVNLQQHDESFKIDQTSLAELVKMKDLDELHKFGGVRGVASALETDFDAGICGSDQDIARRREAFGSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEGWYDGGSILVLFGHCHFSWKQLYTDSTIGDQVPADGLLLDGHSLQVDESSMTGESDHLEVNSSQNPFLFSGTKVADGYARMLATSVGMNTTWGQRM***********PLQARLNELTSSTGKIGLAVAFLVLVVLLLRYFTGNTTDENGNQEYNGSKTKVDDIVNAVVGIVAATVTIIVVAIPEGLPLAVTLTLAYSMKRMMADQVMVRKLSACETMGSATTIGTDKTGTLTENRMKVTKFWLGKELVKEADASSVSPNIIKLIQEGVALNTTGSVYRETSVSDVEFSGSPTEKAILSWAVLEMNMDMEEYSAISLAFFVISFMRKQMVKSTYNEDVIIFVNR
********ANAVSIESLLNFPATLNVPTKKWHSAFTKIYCSRTLFSLAEIAKAKKGINKVSRSPSYTVVNLQQHDESFKIDQTSLAELVKMKDLDELHKFGGVRGVASALETDFDAGICGSDQDIARRREAFGSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEGWYDGGSILVLFGHCHFSWKQLYTDSTIGDQVPADGLLLDGHSLQVDESSMTGESDHLEVNSSQNPFLFSGTKVADGYARMLATSVGMNTTWGQRMSQISRDNSEQTPLQARLNELTSSTGKIGLAVAFLVLVVLLLRYFTGNTTDENGNQEYNGSKTKVDDIVNAVVGIVAATVTIIVVAIPEGLPLAVTLTLAYSMKRMMADQVMVRKLSACETMGSATTIGTDKTGTLTENRMKVTKFWLGKELVKEADASSVSPNIIKLIQEGVALNTTGSVYRETSVSDVEFSGSPTEKAILSWAVLEMNMDMEEYSAISLAFFVISFMRKQMVKSTYNEDVIIFVNR
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSMATIFHANAVSIESLLNFPATLNVPTKKWHSAFTKIYCSRTLFSLAEIAKAKKGINKVSRSPSYTVVNLQQHDESFKIDQTSLAELVKMKDLDELHKFGGVRGVASALETDFDAGICGSDQDIARRREAFGSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEGWYDGGSILVLFGHCHFSWKQLYTDSTIGDQVPADGLLLDGHSLQVDESSMTGESDHLEVNSSQNPFLFSGTKVADGYARMLATSVGMNTTWGQRMSQISRDNSEQTPLQARLNELTSSTGKIGLAVAFLVLVVLLLRYFTGNTTDENGNQEYNGSKTKVDDIVNAVVGIVAATVTIIVVAIPEGLPLAVTLTLAYSMKRMMADQVMVRKLSACETMGSATTIGTDKTGTLTENRMKVTKFWLGKELVKEADASSVSPNIIKLIQEGVALNTTGSVYRETSVSDVEFSGSPTEKAILSWAVLEMNMDMEEYSAISLAFFVISFMRKQMVKSTYNEDVIIFVNR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query523 2.2.26 [Sep-21-2011]
Q9LIK7 1017 Putative calcium-transpor yes no 0.910 0.468 0.577 1e-146
Q9LY77 1033 Calcium-transporting ATPa no no 0.879 0.445 0.572 1e-142
Q9SZR1 1069 Calcium-transporting ATPa no no 0.820 0.401 0.459 1e-105
Q9LF79 1074 Calcium-transporting ATPa no no 0.816 0.397 0.464 1e-104
Q9LU41 1086 Calcium-transporting ATPa no no 0.804 0.387 0.481 1e-100
Q2RAS0 1017 Probable calcium-transpor no no 0.785 0.404 0.397 2e-79
Q2QY12 1039 Probable calcium-transpor no no 0.801 0.403 0.385 2e-76
Q9M2L4 1025 Putative calcium-transpor no no 0.774 0.395 0.372 1e-75
O22218 1030 Calcium-transporting ATPa no no 0.808 0.410 0.360 9e-75
Q65X71 1021 Probable calcium-transpor no no 0.764 0.391 0.362 6e-69
>sp|Q9LIK7|ACA13_ARATH Putative calcium-transporting ATPase 13, plasma membrane-type OS=Arabidopsis thaliana GN=ACA13 PE=3 SV=1 Back     alignment and function desciption
 Score =  518 bits (1335), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 302/523 (57%), Positives = 363/523 (69%), Gaps = 47/523 (8%)

Query: 10  NAVSIESLLNFPATLNVPTKKWHSAFTKIYCSRTLFSLAEIAKAKKGINKVSRSPSYTVV 69
           + V +E LL  P TL+   KKW  A  K+YCSRTL + A+ A  K G+    RS SYT +
Sbjct: 13  DKVGVEVLLELPKTLSKSNKKWQLALIKLYCSRTLLNCAKHAIRKPGL--FPRSLSYTAI 70

Query: 70  NLQQHDES--FKIDQTSLAELVKMKDLDELHKFGGVRGVASALETDFDAGICGSDQDIAR 127
           +L  H     FKID  +L +LVK K+ ++L   GG  G+ SAL+++   GI     +I R
Sbjct: 71  DLDHHHGDDHFKIDTETLNDLVKNKNQEKLESLGGPNGLVSALKSNTRLGINEEGDEIQR 130

Query: 128 RREAFGSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEGWYDGGS 187
           RR  FGSNTY + PSK LF+FVV+A KDLTILILLGCA LSL FGIKEHGLKEGWYDGGS
Sbjct: 131 RRSTFGSNTYTRQPSKGLFHFVVEAFKDLTILILLGCATLSLGFGIKEHGLKEGWYDGGS 190

Query: 188 I-------LVLFGHCHFSWKQLYT-------------------------DSTIG------ 209
           I       + +    +F   + +                          D  +G      
Sbjct: 191 IFVAVFLVVAVSAVSNFRQNRQFDKLSKVSSNIKIDVVRNGRRQEISIFDIVVGDIVCLN 250

Query: 210 --DQVPADGLLLDGHSLQVDESSMTGESDHLEVNSSQNPFLFSGTKVADGYARMLATSVG 267
             DQVPADG+ ++GH L VDESSMTGESDH+EV+ + N FLFSGTK+ADG+ +M  TSVG
Sbjct: 251 IGDQVPADGVFVEGHLLHVDESSMTGESDHVEVSLTGNTFLFSGTKIADGFGKMAVTSVG 310

Query: 268 MNTTWGQRMSQISRDNSEQTPLQARLNELTSSTGKIGLAVAFLVLVVLLLRYFTGNTTDE 327
           MNT WGQ MS ISRD +EQTPLQ+RL++LTSS GK+GL VAFLVL+VLL+RYFTG T DE
Sbjct: 311 MNTAWGQMMSHISRDTNEQTPLQSRLDKLTSSIGKVGLLVAFLVLLVLLIRYFTGTTKDE 370

Query: 328 NGNQEYNGSKTKVDDIVNAVVGIVAATVTIIVVAIPEGLPLAVTLTLAYSMKRMMADQVM 387
           +GN+EYNG  TK D+IVNAVV +VAA VTIIVVAIPEGLPLAVTLTLAYSMKRMM D  M
Sbjct: 371 SGNREYNGKTTKSDEIVNAVVKMVAAAVTIIVVAIPEGLPLAVTLTLAYSMKRMMKDNAM 430

Query: 388 VRKLSACETMGSATTIGTDKTGTLTENRMKVTKFWLGKELVKEADASSVSPNIIKLIQEG 447
           VRKLSACETMGSAT I TDKTGTLT N+MKVT FW G E      ASSVS  +++L  +G
Sbjct: 431 VRKLSACETMGSATVICTDKTGTLTLNQMKVTDFWFGLE---SGKASSVSQRVVELFHQG 487

Query: 448 VALNTTGSVYRETSVSDVEFSGSPTEKAILSWAVLEMNMDMEE 490
           VA+NTTGSV++  + ++ EFSGSPTEKAILSWAV E+ M ME+
Sbjct: 488 VAMNTTGSVFKAKAGTEYEFSGSPTEKAILSWAVEELEMGMEK 530
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 8
>sp|Q9LY77|ACA12_ARATH Calcium-transporting ATPase 12, plasma membrane-type OS=Arabidopsis thaliana GN=ACA12 PE=2 SV=1 Back     alignment and function description
>sp|Q9SZR1|ACA10_ARATH Calcium-transporting ATPase 10, plasma membrane-type OS=Arabidopsis thaliana GN=ACA10 PE=1 SV=2 Back     alignment and function description
>sp|Q9LF79|ACA8_ARATH Calcium-transporting ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=ACA8 PE=1 SV=1 Back     alignment and function description
>sp|Q9LU41|ACA9_ARATH Calcium-transporting ATPase 9, plasma membrane-type OS=Arabidopsis thaliana GN=ACA9 PE=2 SV=2 Back     alignment and function description
>sp|Q2RAS0|ACA5_ORYSJ Probable calcium-transporting ATPase 5, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os11g0140400 PE=3 SV=1 Back     alignment and function description
>sp|Q2QY12|ACA4_ORYSJ Probable calcium-transporting ATPase 4, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0136900 PE=3 SV=1 Back     alignment and function description
>sp|Q9M2L4|ACA11_ARATH Putative calcium-transporting ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=ACA11 PE=3 SV=1 Back     alignment and function description
>sp|O22218|ACA4_ARATH Calcium-transporting ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=ACA4 PE=1 SV=1 Back     alignment and function description
>sp|Q65X71|ACA6_ORYSJ Probable calcium-transporting ATPase 6, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os05g0495600 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query523
225432836 1011 PREDICTED: putative calcium-transporting 0.923 0.477 0.653 0.0
255552021 1018 cation-transporting atpase plant, putati 0.931 0.478 0.659 1e-179
225432838 1012 PREDICTED: putative calcium-transporting 0.919 0.475 0.655 1e-179
225432828 1011 PREDICTED: putative calcium-transporting 0.919 0.475 0.645 1e-177
225432830 1011 PREDICTED: putative calcium-transporting 0.921 0.476 0.648 1e-175
359477570 1009 PREDICTED: putative calcium-transporting 0.900 0.466 0.632 1e-173
225432816 1017 PREDICTED: putative calcium-transporting 0.927 0.476 0.645 1e-173
225432826 1007 PREDICTED: putative calcium-transporting 0.912 0.473 0.631 1e-173
255552023 1013 cation-transporting atpase plant, putati 0.923 0.476 0.653 1e-172
224107941 998 autoinhibited calcium ATPase [Populus tr 0.913 0.478 0.631 1e-171
>gi|225432836|ref|XP_002279818.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  643 bits (1659), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/528 (65%), Positives = 398/528 (75%), Gaps = 45/528 (8%)

Query: 3   MATIFHANAVSIESLLNFPATLNVPTKKWHSAFTKIYCSRTLFSLAEIAKAKKGINKVSR 62
           M++I H N+   ES+L+ PATL    K+WH AF  IYCSR L SL    K KKG      
Sbjct: 1   MSSILHVNSSCRESILDVPATLGRHNKRWHLAFATIYCSRALHSLL---KQKKGSKPPVS 57

Query: 63  SPSYTVVNLQQHDESFKIDQTSLAELVKMKDLDELHKFGGVRGVASALETDFDAGICGSD 122
           + S  V++++ H     ID TSL  +VK K LD+L + GGV GVA AL+T    GI G+ 
Sbjct: 58  THSCVVLSVEPHLAFPNIDHTSLTAVVKEKSLDQLRELGGVEGVADALKTHTKNGIHGAV 117

Query: 123 QDIARRREAFGSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEGW 182
           +D+A R+E FGSNTY +PP+KS FYFV++A KDLTILILL CA LSL FGIKEHGLKEGW
Sbjct: 118 EDVAERQETFGSNTYPRPPTKSFFYFVLEAFKDLTILILLACATLSLGFGIKEHGLKEGW 177

Query: 183 YDGGSILV-------LFGHCHFSW-KQLYTDST--------------------------- 207
           YDGGSI V       +    +F   +QL T S                            
Sbjct: 178 YDGGSIFVAVFLVISVSAVSNFRQNRQLETLSKVSNNIEVEVVRDGHRQKISIFGIVVGD 237

Query: 208 -----IGDQVPADGLLLDGHSLQVDESSMTGESDHLEVNSSQNPFLFSGTKVADGYARML 262
                IGDQVPADGL L GHSLQVDESSMTGESDH+E+NSSQNPFLFSGTKVADGYA+ML
Sbjct: 238 VACLKIGDQVPADGLFLAGHSLQVDESSMTGESDHVEINSSQNPFLFSGTKVADGYAQML 297

Query: 263 ATSVGMNTTWGQRMSQISRDNSEQTPLQARLNELTSSTGKIGLAVAFLVLVVLLLRYFTG 322
            TSVGMNTTWG+ MS IS DN+EQTPLQARLN+LTSS GK+GLAVAFLVLV+L++RYFTG
Sbjct: 298 VTSVGMNTTWGEMMSTISHDNNEQTPLQARLNKLTSSIGKVGLAVAFLVLVMLVVRYFTG 357

Query: 323 NTTDENGNQEYNGSKTKVDDIVNAVVGIVAATVTIIVVAIPEGLPLAVTLTLAYSMKRMM 382
           NT DENGNQE+NGSKTK DDIVNA+V I+AA VTI+VVAIPEGLPLAVTLTLAYSMKRMM
Sbjct: 358 NTEDENGNQEFNGSKTKADDIVNAMVRIIAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMM 417

Query: 383 ADQVMVRKLSACETMGSATTIGTDKTGTLTENRMKVTKFWLGKELVKEADASSVSPNIIK 442
           ADQ MVRKLSACETMGSATTI TDKTGTLT N+MKVTK+WLGKE V+  D+SS++ NI+K
Sbjct: 418 ADQAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKYWLGKEPVE--DSSSIATNILK 475

Query: 443 LIQEGVALNTTGSVYRETSVSDVEFSGSPTEKAILSWAVLEMNMDMEE 490
           LIQ+GVALNTTGS+YR TS S+ EFSGSPTEKA+LSWAVLE++MDME 
Sbjct: 476 LIQQGVALNTTGSIYRATSKSEFEFSGSPTEKALLSWAVLELDMDMER 523

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255552021|ref|XP_002517055.1| cation-transporting atpase plant, putative [Ricinus communis] gi|223543690|gb|EEF45218.1| cation-transporting atpase plant, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225432838|ref|XP_002279864.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|225432828|ref|XP_002279593.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|225432830|ref|XP_002279629.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|359477570|ref|XP_002279443.2| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|225432816|ref|XP_002283579.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|225432826|ref|XP_002279567.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|255552023|ref|XP_002517056.1| cation-transporting atpase plant, putative [Ricinus communis] gi|223543691|gb|EEF45219.1| cation-transporting atpase plant, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224107941|ref|XP_002314662.1| autoinhibited calcium ATPase [Populus trichocarpa] gi|222863702|gb|EEF00833.1| autoinhibited calcium ATPase [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query523
TAIR|locus:2084578 1017 AT3G22910 [Arabidopsis thalian 0.535 0.275 0.583 9.9e-131
TAIR|locus:2087363 1033 AT3G63380 [Arabidopsis thalian 0.537 0.272 0.595 1.2e-123
TAIR|locus:2123924 1069 ACA10 "autoinhibited Ca(2+)-AT 0.571 0.279 0.456 9.2e-88
TAIR|locus:2094726 1086 ACA9 "autoinhibited Ca(2+)-ATP 0.554 0.267 0.476 2e-86
TAIR|locus:2175579 1074 ACA8 ""autoinhibited Ca2+ -ATP 0.550 0.268 0.467 1.5e-85
TAIR|locus:2082528 1025 ACA11 "autoinhibited Ca2+-ATPa 0.567 0.289 0.349 1.5e-59
TAIR|locus:2062673 1030 ACA4 ""autoinhibited Ca(2+)-AT 0.541 0.274 0.349 1.5e-59
TAIR|locus:2029794 1020 ACA1 "autoinhibited Ca2+-ATPas 0.183 0.094 0.525 5.9e-52
TAIR|locus:2059201 1015 ACA7 "auto-regulated Ca2+-ATPa 0.183 0.094 0.567 2.9e-50
TAIR|locus:2120096 1014 ACA2 "calcium ATPase 2" [Arabi 0.183 0.094 0.556 4e-50
TAIR|locus:2084578 AT3G22910 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 816 (292.3 bits), Expect = 9.9e-131, Sum P(2) = 9.9e-131
 Identities = 165/283 (58%), Positives = 194/283 (68%)

Query:   208 IGDQVPADGLLLDGHSLQVDESSMTGESDHLEVNSSQNPFLFSGTKVADGYARMLATSVG 267
             IGDQVPADG+ ++GH L VDESSMTGESDH+EV+ + N FLFSGTK+ADG+ +M  TSVG
Sbjct:   251 IGDQVPADGVFVEGHLLHVDESSMTGESDHVEVSLTGNTFLFSGTKIADGFGKMAVTSVG 310

Query:   268 MNTTWGQRMSQISRDNSEQTPLQARLNELTSSTGKIGXXXXXXXXXXXXXRYFTGNTTDE 327
             MNT WGQ MS ISRD +EQTPLQ+RL++LTSS GK+G             RYFTG T DE
Sbjct:   311 MNTAWGQMMSHISRDTNEQTPLQSRLDKLTSSIGKVGLLVAFLVLLVLLIRYFTGTTKDE 370

Query:   328 NGNQEYNGSKTKXXXXXXXXXXXXXXXXXXXXXXXPEGLPLAVTLTLAYSMKRMMADQVM 387
             +GN+EYNG  TK                       PEGLPLAVTLTLAYSMKRMM D  M
Sbjct:   371 SGNREYNGKTTKSDEIVNAVVKMVAAAVTIIVVAIPEGLPLAVTLTLAYSMKRMMKDNAM 430

Query:   388 VRKLSACETMGSAXXXXXXXXXXXXENRMKVTKFWLGKELVKEADASSVSPNIIKLIQEG 447
             VRKLSACETMGSA             N+MKVT FW G E  K   ASSVS  +++L  +G
Sbjct:   431 VRKLSACETMGSATVICTDKTGTLTLNQMKVTDFWFGLESGK---ASSVSQRVVELFHQG 487

Query:   448 VALNTTGSVYRETSVSDVEFSGSPTEKAILSWAVLEMNMDMEE 490
             VA+NTTGSV++  + ++ EFSGSPTEKAILSWAV E+ M ME+
Sbjct:   488 VAMNTTGSVFKAKAGTEYEFSGSPTEKAILSWAVEELEMGMEK 530
GO:0000166 "nucleotide binding" evidence=IEA
GO:0003824 "catalytic activity" evidence=IEA
GO:0005388 "calcium-transporting ATPase activity" evidence=IEA;ISS
GO:0005524 "ATP binding" evidence=IEA
GO:0006754 "ATP biosynthetic process" evidence=IEA
GO:0006812 "cation transport" evidence=IEA
GO:0008152 "metabolic process" evidence=IEA
GO:0015662 "ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism" evidence=IEA
GO:0016020 "membrane" evidence=IEA
GO:0046872 "metal ion binding" evidence=IEA
GO:0070588 "calcium ion transmembrane transport" evidence=IEA
GO:0005516 "calmodulin binding" evidence=ISS
GO:0006816 "calcium ion transport" evidence=RCA
GO:0006882 "cellular zinc ion homeostasis" evidence=RCA
GO:0009624 "response to nematode" evidence=RCA
TAIR|locus:2087363 AT3G63380 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2123924 ACA10 "autoinhibited Ca(2+)-ATPase 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2094726 ACA9 "autoinhibited Ca(2+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2175579 ACA8 ""autoinhibited Ca2+ -ATPase, isoform 8"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082528 ACA11 "autoinhibited Ca2+-ATPase 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2062673 ACA4 ""autoinhibited Ca(2+)-ATPase, isoform 4"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029794 ACA1 "autoinhibited Ca2+-ATPase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2059201 ACA7 "auto-regulated Ca2+-ATPase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2120096 ACA2 "calcium ATPase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00100736
autoinhibited calcium ATPase (998 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query523
TIGR01517 944 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- 1e-95
COG0474 917 COG0474, MgtA, Cation transport ATPase [Inorganic 5e-59
pfam00122222 pfam00122, E1-E2_ATPase, E1-E2 ATPase 6e-43
TIGR01494 543 TIGR01494, ATPase_P-type, ATPase, P-type (transpor 5e-34
TIGR01522 884 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- 8e-34
TIGR01116 917 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic 2e-31
TIGR01106 997 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux 1e-25
TIGR01647 754 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e 8e-24
COG2217 713 COG2217, ZntA, Cation transport ATPase [Inorganic 1e-18
TIGR01525 556 TIGR01525, ATPase-IB_hvy, heavy metal translocatin 4e-17
TIGR01512 536 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb 1e-15
TIGR01511 572 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans 8e-15
PRK10517 902 PRK10517, PRK10517, magnesium-transporting ATPase 2e-14
TIGR01524 867 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating 8e-14
TIGR01523 1053 TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu 7e-13
pfam0069069 pfam00690, Cation_ATPase_N, Cation transporter/ATP 1e-12
smart0083175 smart00831, Cation_ATPase_N, Cation transporter/AT 2e-09
PRK10671 834 PRK10671, copA, copper exporting ATPase; Provision 5e-09
TIGR01657 1054 TIGR01657, P-ATPase-V, P-type ATPase of unknown pu 3e-08
PRK15122 903 PRK15122, PRK15122, magnesium-transporting ATPase; 9e-07
COG2216 681 COG2216, KdpB, High-affinity K+ transport system, 7e-06
TIGR01497 675 TIGR01497, kdpB, K+-transporting ATPase, B subunit 3e-05
PRK14010 673 PRK14010, PRK14010, potassium-transporting ATPase 7e-05
>gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase Back     alignment and domain information 
 Score =  310 bits (795), Expect = 1e-95
 Identities = 169/495 (34%), Positives = 249/495 (50%), Gaps = 60/495 (12%)

Query: 62  RSPSYTVVNLQQHDESFKIDQTSLAELVKMKDLDELHKFGGVRGVASALETDFDAGICGS 121
           R  +    N     +      T L ++ K + +    K GG  G+A+ L+TD + G+  S
Sbjct: 5   RRRTSIRDNFTDGFDVGVSILTDLTDIFK-RAMPLYEKLGGAEGIATKLKTDLNEGVRLS 63

Query: 122 DQDIARRREAFGSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGL--- 178
              + RR + +G N   + P KS    V  AL D T+++L   AV+SL  G+ E G    
Sbjct: 64  SSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 123

Query: 179 --KEGWYDGGSIL------VLFGHCHFSWKQL--------------------------YT 204
             + GW +G +IL      VL    +   K+L                            
Sbjct: 124 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIH 183

Query: 205 DSTIGD--------QVPADGLLLDGHSLQVDESSMTGESDHLEVNSSQNPFLFSGTKVAD 256
           D  +GD         VPADG+ + G SL++DESS+TGESD ++    Q+PFL SGT V +
Sbjct: 184 DIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGPVQDPFLLSGTVVNE 243

Query: 257 GYARMLATSVGMNTTWGQRMSQISRDNSEQTPLQARLNELTSSTGKIGLAVAFLVLVVLL 316
           G  RML T+VG+N+  G+ M ++ +   + TPLQ +L+EL    GK G+  A L+ +VL 
Sbjct: 244 GSGRMLVTAVGVNSFGGKLMMELRQAGEDSTPLQEKLSELAGLIGKFGMGSAVLLFLVLS 303

Query: 317 LRYFTGNTTDENGNQEYNGSKTKVDDIVNAVVGIVAATVTIIVVAIPEGLPLAVTLTLAY 376
           LRY       +  + E +             +      VTI+VVA+PEGLPLAVT+ LAY
Sbjct: 304 LRYVFRIIRGDGRDTEEDAQT---------FLDHFIIAVTIVVVAVPEGLPLAVTIALAY 354

Query: 377 SMKRMMADQVMVRKLSACETMGSATTIGTDKTGTLTENRMKVTKFWLGKELVKEADASSV 436
           SMK+MM D  +VR L+ACETMGSAT I +DKTGTLT+N M V + ++G++     D    
Sbjct: 355 SMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRN 414

Query: 437 SPNIIK-LIQEGVALNTTGSVYRETSVSDVEFSGSPTEKAILSWAVLEMNMDMEEYSAIS 495
            P  ++ ++ EG++LN++     +       F GS TE A+L + +L +  D +E  A  
Sbjct: 415 VPKHVRNILVEGISLNSSSEEVVDRG-GKRAFIGSKTECALLDFGLLLLR-DYQEVRAEE 472

Query: 496 LAFFVISF--MRKQM 508
               +  F   RK M
Sbjct: 473 KVVKIYPFNSERKFM 487

This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944
>gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase Back     alignment and domain information
>gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC Back     alignment and domain information
>gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit Back     alignment and domain information
>gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase Back     alignment and domain information
>gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional Back     alignment and domain information
>gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase Back     alignment and domain information
>gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type Back     alignment and domain information
>gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus Back     alignment and domain information
>gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus Back     alignment and domain information
>gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional Back     alignment and domain information
>gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) Back     alignment and domain information
>gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional Back     alignment and domain information
>gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit Back     alignment and domain information
>gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 523
KOG0204 1034 consensus Calcium transporting ATPase [Inorganic i 100.0
TIGR01517 941 ATPase-IIB_Ca plasma-membrane calcium-translocatin 100.0
KOG0202 972 consensus Ca2+ transporting ATPase [Inorganic ion 100.0
TIGR01523 1053 ATPase-IID_K-Na potassium and/or sodium efflux P-t 100.0
COG0474 917 MgtA Cation transport ATPase [Inorganic ion transp 100.0
TIGR01522 884 ATPase-IIA2_Ca golgi membrane calcium-translocatin 100.0
TIGR01106 997 ATPase-IIC_X-K sodium or proton efflux -- potassiu 100.0
TIGR01524 867 ATPase-IIIB_Mg magnesium-translocating P-type ATPa 100.0
PRK10517 902 magnesium-transporting ATPase MgtA; Provisional 100.0
PRK15122 903 magnesium-transporting ATPase; Provisional 100.0
TIGR01116 917 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium 100.0
TIGR01647 755 ATPase-IIIA_H plasma-membrane proton-efflux P-type 100.0
TIGR01657 1054 P-ATPase-V P-type ATPase of unknown pump specifici 100.0
TIGR01652 1057 ATPase-Plipid phospholipid-translocating P-type AT 100.0
KOG0203 1019 consensus Na+/K+ ATPase, alpha subunit [Inorganic 100.0
PLN03190 1178 aminophospholipid translocase; Provisional 100.0
PRK01122 679 potassium-transporting ATPase subunit B; Provision 100.0
KOG0205 942 consensus Plasma membrane H+-transporting ATPase [ 100.0
TIGR01497 675 kdpB K+-transporting ATPase, B subunit. One sequen 100.0
PRK14010 673 potassium-transporting ATPase subunit B; Provision 100.0
KOG0208 1140 consensus Cation transport ATPase [Inorganic ion t 100.0
KOG0210 1051 consensus P-type ATPase [Inorganic ion transport a 100.0
KOG0206 1151 consensus P-type ATPase [General function predicti 100.0
TIGR01512 536 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo 100.0
TIGR01525 556 ATPase-IB_hvy heavy metal translocating P-type ATP 100.0
TIGR01511 562 ATPase-IB1_Cu copper-(or silver)-translocating P-t 100.0
TIGR01494 499 ATPase_P-type ATPase, P-type (transporting), HAD s 100.0
PRK11033 741 zntA zinc/cadmium/mercury/lead-transporting ATPase 100.0
PRK10671 834 copA copper exporting ATPase; Provisional 100.0
KOG0209 1160 consensus P-type ATPase [Inorganic ion transport a 100.0
COG2217 713 ZntA Cation transport ATPase [Inorganic ion transp 100.0
KOG0207 951 consensus Cation transport ATPase [Inorganic ion t 99.97
PF00122230 E1-E2_ATPase: E1-E2 ATPase p-type cation-transport 99.95
COG2216 681 KdpB High-affinity K+ transport system, ATPase cha 99.87
PF0069069 Cation_ATPase_N: Cation transporter/ATPase, N-term 99.39
PF1324691 Hydrolase_like2: Putative hydrolase of sodium-pota 99.38
smart0083164 Cation_ATPase_N Cation transporter/ATPase, N-termi 99.29
PF1251547 CaATP_NAI: Ca2+-ATPase N terminal autoinhibitory d 97.58
PF00702215 Hydrolase: haloacid dehalogenase-like hydrolase; I 96.92
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.6e-107  Score=870.57  Aligned_cols=486  Identities=42%  Similarity=0.668  Sum_probs=434.0

Q ss_pred             CCCCCcchhhhhhhhhchhhhhhHHHHHHHhhc--ccCcccCCCcceeec--------ccCCCCCCCcChhHHHHHhccC
Q 044442           23 TLNVPTKKWHSAFTKIYCSRTLFSLAEIAKAKK--GINKVSRSPSYTVVN--------LQQHDESFKIDQTSLAELVKMK   92 (523)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--------~~~~~~~~~i~~~~l~~~~~~~   92 (523)
                      ...++++|||.+..++++.|++++..++++.++  ..+...|+..++..+        ..++. .-.|++++|.++++++
T Consensus        14 ~~~~~~~~~~~a~~~~~~~~~~~~~~~l~~~~~~~~~r~~~r~~~~~~~a~~~~~~~~~~~e~-~~~i~~e~l~~i~~~~   92 (1034)
T KOG0204|consen   14 SSIEALQRWRLAYIVLEASRRFRFGASLKKLRELMEPRRKIRSAVLVSKAAALFIDAGSRTEY-TLGIGAEELVKIVKEH   92 (1034)
T ss_pred             chhhhhhhhhhhhhhcccchhhccccCHHHHHHHHHHHhhhhhhhcccchhhhhhcccccccc-ccccCHHHHHHHhhcc
Confidence            347789999999999999999998866544211  111122222222111        11111 2288999999999999


Q ss_pred             ChhHHHhhCCHHHHHHHhCCCcCCCCCCCHHHHHHHHHhcCCCccCCCCCCcHHHHHHHHHhhHHHHHHHHHHHHHhhhc
Q 044442           93 DLDELHKFGGVRGVASALETDFDAGICGSDQDIARRREAFGSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFG  172 (523)
Q Consensus        93 ~~~~l~~~g~~~~l~~~l~t~~~~GLs~~~~~v~~r~~~~G~N~i~~~~~~~~~~~~~~~f~~~~~~ill~~ailsl~~~  172 (523)
                      |.+.|+.+||++|++++|+||+..||+++.+|+.+||+.||+|.||++++|+||+|+||+|+|.++++|++||++|+++|
T Consensus        93 ~~~~L~~~gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lg  172 (1034)
T KOG0204|consen   93 DLKALNAYGGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLG  172 (1034)
T ss_pred             chhhhhhccCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhh
Confidence            99999999999999999999999999998899999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCcccccchhhhhhhhhh-cc----cceee---ec-----------------------------CC---CCCCCee
Q 044442          173 IKEHGLKEGWYDGGSILVLFGH-CH----FSWKQ---LY-----------------------------TD---STIGDQV  212 (523)
Q Consensus       173 i~~~g~~~~~~~~~~il~~vlv-i~----~~~~q---~~-----------------------------GD---L~~Gd~V  212 (523)
                      ++++|.+++||+|++|+++|++ +.    +||+|   |+                             ||   |+.||+|
T Consensus       173 i~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqv  252 (1034)
T KOG0204|consen  173 IYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQV  252 (1034)
T ss_pred             hccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCcc
Confidence            9999999999999999999833 32    78876   32                             99   9999999


Q ss_pred             ccCeEEEEecceEEeecccCCCCceeeecCCCCceEeeeceeecCcEEEEEEEecccchHHHHHHHhcccCCCCChHHHH
Q 044442          213 PADGLLLDGHSLQVDESSMTGESDHLEVNSSQNPFLFSGTKVADGYARMLATSVGMNTTWGQRMSQISRDNSEQTPLQAR  292 (523)
Q Consensus       213 PAD~ill~g~~l~VDeS~LTGES~pv~k~~~~~~~l~~GT~v~~G~~~~~V~~tG~~T~~Gki~~~~~~~~~~~tplq~~  292 (523)
                      ||||++++|++|.+|||+|||||++++|+...+|||+|||++++|+|+|+||+||+||+||++|..+.+...++||||.+
T Consensus       253 PADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~k  332 (1034)
T KOG0204|consen  253 PADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVK  332 (1034)
T ss_pred             ccceEEEeccceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999899999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCCCcccCCCCcchhhHHHHHHHHHHHHHHHHHHHhcCchHHHHHH
Q 044442          293 LNELTSSTGKIGLAVAFLVLVVLLLRYFTGNTTDENGNQEYNGSKTKVDDIVNAVVGIVAATVTIIVVAIPEGLPLAVTL  372 (523)
Q Consensus       293 l~~~~~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~gLplavtl  372 (523)
                      |++++.+|+++++.+|+++++++++||+.+++....+.     ......+..+.++.+|+++++++|+|||||||+|||+
T Consensus       333 L~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~-----~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTL  407 (1034)
T KOG0204|consen  333 LNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGT-----GTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTL  407 (1034)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCC-----CccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHH
Confidence            99999999999999999999999999999876554332     1223345678899999999999999999999999999


Q ss_pred             HHHHHHHHHhhCCcccccchhhhhccCceEEEecCCCccccCceEEEEEEeCCeeeccccc--CCCCHHHHHHHHHHHhh
Q 044442          373 TLAYSMKRMMADQVMVRKLSACETMGSATTIGTDKTGTLTENRMKVTKFWLGKELVKEADA--SSVSPNIIKLIQEGVAL  450 (523)
Q Consensus       373 ~l~~~~~~m~~~~ilvr~~~~~E~lG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~i~~  450 (523)
                      ++||+++||++||+|||+++||||||++++||+|||||||+|+|+|++.|++++.+.....  ..+++.+.+++.++|+.
T Consensus       408 sLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~  487 (1034)
T KOG0204|consen  408 SLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQ  487 (1034)
T ss_pred             HHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhh
Confidence            9999999999999999999999999999999999999999999999999999988774433  36889999999999999


Q ss_pred             ccCccceeccCCC-ceeEccChHHHHHHHHHHHHcCCChHHHhhccceeEEeCCCCCCceEEEEEc
Q 044442          451 NTTGSVYRETSVS-DVEFSGSPTEKAILSWAVLEMNMDMEEYSAISLAFFVISFMRKQMVKSTYNE  515 (523)
Q Consensus       451 n~~~~~~~~~~~~-~~~~~GsptE~ALl~~a~~~lg~~~~~~~~~~~il~~~pFnS~rKrMSVIv~  515 (523)
                      |+++++++++.++ .+++.|||||+|||.|+ .++|++++..|++.+++|++||||+||||+|+++
T Consensus       488 Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~-~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~  552 (1034)
T KOG0204|consen  488 NTTGSVVKPEKGGEQPEQLGSPTECALLGFG-LKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIK  552 (1034)
T ss_pred             cCCCeEEecCCCCcCccccCCHHHHHHHHHH-HHhCcchHhhcchhheeEEeccCcccceeeEEEE
Confidence            9999999877664 88999999999999999 5799999999999999999999999999999998

>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase Back     alignment and domain information
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type Back     alignment and domain information
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase Back     alignment and domain information
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit Back     alignment and domain information
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase Back     alignment and domain information
>PRK10517 magnesium-transporting ATPase MgtA; Provisional Back     alignment and domain information
>PRK15122 magnesium-transporting ATPase; Provisional Back     alignment and domain information
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase Back     alignment and domain information
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase Back     alignment and domain information
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) Back     alignment and domain information
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase Back     alignment and domain information
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] Back     alignment and domain information
>PLN03190 aminophospholipid translocase; Provisional Back     alignment and domain information
>PRK01122 potassium-transporting ATPase subunit B; Provisional Back     alignment and domain information
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR01497 kdpB K+-transporting ATPase, B subunit Back     alignment and domain information
>PRK14010 potassium-transporting ATPase subunit B; Provisional Back     alignment and domain information
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG0206 consensus P-type ATPase [General function prediction only] Back     alignment and domain information
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase Back     alignment and domain information
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase Back     alignment and domain information
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase Back     alignment and domain information
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC Back     alignment and domain information
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional Back     alignment and domain information
>PRK10671 copA copper exporting ATPase; Provisional Back     alignment and domain information
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane Back     alignment and domain information
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane Back     alignment and domain information
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit Back     alignment and domain information
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus Back     alignment and domain information
>PF12515 CaATP_NAI: Ca2+-ATPase N terminal autoinhibitory domain; InterPro: IPR024750 This entry represents the N-terminal autoinhibitory calmodulin-binding domain characteristic of certain calcium-transporting ATPases [] Back     alignment and domain information
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query523
3ba6_A 994 Structure Of The Ca2e1p Phosphoenzyme Intermediate 2e-14
2dqs_A 995 Crystal Structure Of The Calcium Pump With Amppcp I 3e-14
1kju_A 994 Ca2+-Atpase In The E2 State Length = 994 3e-14
3tlm_A 992 Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp 7e-14
3b8c_A 885 Crystal Structure Of A Plasma Membrane Proton Pump 1e-05
2zxe_A 1028 Crystal Structure Of The Sodium - Potassium Pump In 2e-05
3n23_A 992 Crystal Structure Of The High Affinity Complex Betw 4e-05
3b8e_A 998 Crystal Structure Of The Sodium-Potassium Pump Leng 5e-05
3ixz_A 1034 Pig Gastric H+K+-Atpase Complexed With Aluminium Fl 2e-04
>pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 Back     alignment and structure 
Iteration: 1

 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 84/367 (22%), Positives = 132/367 (35%), Gaps = 90/367 (24%)
Query: 122 DQDIARRREAFGSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEG 181
           DQ + R  E +G N       KSL+  V++  +DL + ILL  A +S             
Sbjct: 27  DQ-VKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLA--------- 76
Query: 182 WYDGGS------------ILVLFGHCHFS-WKQLYTDSTI-------------------- 208
           W++ G             +L+L  +     W++   ++ I                    
Sbjct: 77  WFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVYRADRKS 136
Query: 209 -------------------GDQVPADGLLLDGHS--LQVDESSMTGES-----------D 236
                              GD+VPAD  +L   S  L+VD+S +TGES           D
Sbjct: 137 VQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPD 196
Query: 237 HLEVNSSQNPFLFSGTKVADGYARMLATSVGMNTTWGQRMSQISRDNSEQTPLQARLNEL 296
              VN  +   LFSGT +A G A  +  + G++T  G+   Q++    ++TPLQ +L+E 
Sbjct: 197 PRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAATEQDKTPLQQKLDEF 256
Query: 297 TSSTGKIGXXXXXXXXXXXXXRYFTGNTTDENGNQEYNGSKTKXXXXXXXXXXXXXXXXX 356
                K+               +          +  + GS  +                 
Sbjct: 257 GEQLSKVISLICVAVWLINIGHF---------NDPVHGGSWIR------GAIYYFKIAVA 301
Query: 357 XXXXXXPEGLPLAVTLTLAYSMKRMMADQVMVRKLSACETMGSAXXXXXXXXXXXXENRM 416
                 PEGLP  +T  LA   +RM     +VR L + ET+G               N+M
Sbjct: 302 LAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSXKTGTLTTNQM 361
Query: 417 KVTKFWL 423
            V K ++
Sbjct: 362 SVCKMFI 368
>pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 Back     alignment and structure
>pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 Back     alignment and structure
>pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 Back     alignment and structure
>pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 Back     alignment and structure
>pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 Back     alignment and structure
>pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 Back     alignment and structure
>pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 Back     alignment and structure
>pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query523
2zxe_A 1028 Na, K-ATPase alpha subunit; membrane protein, ION 2e-60
3ixz_A 1034 Potassium-transporting ATPase alpha; ION pump, H+, 1e-59
3ar4_A 995 Sarcoplasmic/endoplasmic reticulum calcium ATPase; 2e-56
3b8c_A 885 ATPase 2, plasma membrane-type; P-type ATPase, pro 3e-48
1mhs_A 920 Proton pump, plasma membrane ATPase; ION transport 4e-46
3j09_A 723 COPA, copper-exporting P-type ATPase A; copper tra 2e-10
3j08_A 645 COPA, copper-exporting P-type ATPase A; copper tra 5e-10
2hc8_A113 PACS, cation-transporting ATPase, P-type; copper, 7e-07
3rfu_A 736 Copper efflux ATPase; alpha helical, CPC, CXXC, AT 1e-06
2kij_A124 Copper-transporting ATPase 1; actuator, menkes dis 2e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
2yj3_A 263 Copper-transporting ATPase; hydrolase, P-type ATPa 2e-04
3a1c_A 287 Probable copper-exporting P-type ATPase A; ATP-bin 4e-04
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 Back     alignment and structure
 Score =  214 bits (547), Expect = 2e-60
 Identities = 111/495 (22%), Positives = 174/495 (35%), Gaps = 105/495 (21%)

Query: 59  KVSRSPSYTVVNLQQHDESFKIDQTSLAELVKMKDLDELHKFGG-------VRGVASALE 111
           K + S  Y      ++    K  +    ++ K +DLDEL K          +  + +   
Sbjct: 3   KGTASDKYEPAATSENATKSK-KKGKKDKIDKKRDLDELKKEVSMDDHKLSLDELHNKYG 61

Query: 112 TDFDAGICGSDQDIARRREAFGSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLS-LA 170
           TD   G+  ++          G N+   PP+   +      L     ++L   A+L  LA
Sbjct: 62  TDLTRGL--TNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLA 119

Query: 171 FGIKEHGLKEG----WYDGGSILV------LFGHCHF-----------SWKQLYTDSTI- 208
           +GI+     E      Y G  +         F    +           S+K +     + 
Sbjct: 120 YGIQAATEDEPANDNLYLGVVLSTVVIVTGCFS---YYQEAKSSRIMDSFKNMVPQQALV 176

Query: 209 ------------------------GDQVPADGLLLDGHSLQVDESSMTGESDHLE---VN 241
                                   GD++PAD  ++  H  +VD SS+TGES+        
Sbjct: 177 IRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHGCKVDNSSLTGESEPQTRSPEF 236

Query: 242 SSQNPF-----LFSGTKVADGYARMLATSVGMNTTWGQRMSQISRDNSEQTPLQARLNEL 296
           SS+NP       F  T   +G AR +    G  T  G+  +  S     +TP+   +   
Sbjct: 237 SSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVGRTPIAIEIEHF 296

Query: 297 TSSTGKIGLAVAFLVLVVLLLRYFTGNTTDENGNQEYNGSKTKVDDIVNAVVGIVAATVT 356
                 I     FL +   +L    G                     + AV+      + 
Sbjct: 297 IH---IITGVAVFLGVSFFILSLILGY------------------SWLEAVI----FLIG 331

Query: 357 IIVVAIPEGLPLAVTLTLAYSMKRMMADQVMVRKLSACETMGSATTIGTDKTGTLTENRM 416
           IIV  +PEGL   VT+ L  + KRM     +V+ L A ET+GS +TI +DKTGTLT+NRM
Sbjct: 332 IIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRM 391

Query: 417 KVTKFWLGKELVKEADASSVSPN--------IIKLIQEGVALNTTGSVYRETSVSDV--- 465
            V   W   ++  EAD +                 +    AL              +   
Sbjct: 392 TVAHMWFDNQIH-EADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQDNVPILKR 450

Query: 466 EFSGSPTEKAILSWA 480
             +G  +E A+L   
Sbjct: 451 SVAGDASESALLKCI 465
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 Back     alignment and structure
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 Back     alignment and structure
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 Back     alignment and structure
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 Back     alignment and structure
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 Back     alignment and structure
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 Back     alignment and structure
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 Back     alignment and structure
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 Back     alignment and structure
>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 Back     alignment and structure
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query523
2zxe_A 1028 Na, K-ATPase alpha subunit; membrane protein, ION 100.0
3ixz_A 1034 Potassium-transporting ATPase alpha; ION pump, H+, 100.0
3ar4_A 995 Sarcoplasmic/endoplasmic reticulum calcium ATPase; 100.0
1mhs_A 920 Proton pump, plasma membrane ATPase; ION transport 100.0
3b8c_A 885 ATPase 2, plasma membrane-type; P-type ATPase, pro 100.0
3rfu_A 736 Copper efflux ATPase; alpha helical, CPC, CXXC, AT 100.0
3j08_A 645 COPA, copper-exporting P-type ATPase A; copper tra 100.0
3j09_A 723 COPA, copper-exporting P-type ATPase A; copper tra 100.0
2hc8_A113 PACS, cation-transporting ATPase, P-type; copper, 99.75
2kij_A124 Copper-transporting ATPase 1; actuator, menkes dis 99.74
2yj3_A 263 Copper-transporting ATPase; hydrolase, P-type ATPa 98.09
3a1c_A 287 Probable copper-exporting P-type ATPase A; ATP-bin 98.25
3gwi_A170 Magnesium-transporting ATPase, P-type 1; P-type AT 98.13
4aqr_D57 Calcium-transporting ATPase 8, plasma membrane-TY; 97.27
3skx_A 280 Copper-exporting P-type ATPase B; P1B-ATPase, ATP 97.14
2l1w_B26 Vacuolar calcium ATPase BCA1 peptide; calmodulin, 93.93
4fe3_A 297 Cytosolic 5'-nucleotidase 3; substrate complex, HA 91.48
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Back     alignment and structure
Probab=100.00  E-value=3.2e-65  Score=593.84  Aligned_cols=387  Identities=22%  Similarity=0.294  Sum_probs=316.8

Q ss_pred             CHHHHHHHhCCCcCCCCCCCHHHHHHHHHhcCCCccCCCCCCcHHHHHHHHHhhHHHHHHHHHHHHHhhhcccc----c-
Q 044442          102 GVRGVASALETDFDAGICGSDQDIARRREAFGSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKE----H-  176 (523)
Q Consensus       102 ~~~~l~~~l~t~~~~GLs~~~~~v~~r~~~~G~N~i~~~~~~~~~~~~~~~f~~~~~~ill~~ailsl~~~i~~----~-  176 (523)
                      +++++++.|++++++||+  ++|+++|+++||+|++++++.+++|+.++++|+++++++|++++++|++.+...    + 
T Consensus        52 ~~~~~~~~l~t~~~~GLs--~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~  129 (1028)
T 2zxe_A           52 SLDELHNKYGTDLTRGLT--NARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDE  129 (1028)
T ss_dssp             CHHHHHHHHTCCSSSCBC--HHHHHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred             CHHHHHHHhCcCccCCCC--HHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcccccc
Confidence            589999999999999999  789999999999999999989999999999999999999999999998875322    1 


Q ss_pred             CCcccccchhhhhhhhhhcc-c----ceee-----------------ec--------------CC---CCCCCeeccCeE
Q 044442          177 GLKEGWYDGGSILVLFGHCH-F----SWKQ-----------------LY--------------TD---STIGDQVPADGL  217 (523)
Q Consensus       177 g~~~~~~~~~~il~~vlvi~-~----~~~q-----------------~~--------------GD---L~~Gd~VPAD~i  217 (523)
                      .+..+|++++.|++++++.. .    +++.                 ++              ||   |++||+|||||+
T Consensus       130 ~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~  209 (1028)
T 2zxe_A          130 PANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLR  209 (1028)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGCCTTCEEEEETTCBCCSEEE
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEECCEEEEEEHHHCCcCCEEEECCCCEeeceEE
Confidence            11235777776655554332 1    1111                 00              99   999999999999


Q ss_pred             EEEecceEEeecccCCCCceeeecCCC--------CceEeeeceeecCcEEEEEEEecccchHHHHHHHhcccCCCCChH
Q 044442          218 LLDGHSLQVDESSMTGESDHLEVNSSQ--------NPFLFSGTKVADGYARMLATSVGMNTTWGQRMSQISRDNSEQTPL  289 (523)
Q Consensus       218 ll~g~~l~VDeS~LTGES~pv~k~~~~--------~~~l~~GT~v~~G~~~~~V~~tG~~T~~Gki~~~~~~~~~~~tpl  289 (523)
                      |++|++|.||||+|||||.|+.|.++.        .|++|+||.|.+|.++++|++||.+|++|++++++.+.+.++||+
T Consensus       210 ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~l  289 (1028)
T 2zxe_A          210 IISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVGRTPI  289 (1028)
T ss_dssp             EEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHHHHHSCCCCCHH
T ss_pred             EEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHHHhccCCCCCCCcH
Confidence            999998999999999999999998643        368999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCCCcccCCCCcchhhHHHHHHHHHHHHHHHHHHHhcCchHHH
Q 044442          290 QARLNELTSSTGKIGLAVAFLVLVVLLLRYFTGNTTDENGNQEYNGSKTKVDDIVNAVVGIVAATVTIIVVAIPEGLPLA  369 (523)
Q Consensus       290 q~~l~~~~~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~gLpla  369 (523)
                      |+.+++++..+..++++++++++++.+   +.+.                      .+...+..++++++++||||||++
T Consensus       290 q~~~~~~~~~l~~~~l~~~~~~~~~~~---~~~~----------------------~~~~~~~~~i~llv~~iP~~Lp~~  344 (1028)
T 2zxe_A          290 AIEIEHFIHIITGVAVFLGVSFFILSL---ILGY----------------------SWLEAVIFLIGIIVANVPEGLLAT  344 (1028)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHH---HTTC----------------------CHHHHHHHHHHHHHHHSCTTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH---HccC----------------------cHHHHHHHHHHHHHHHcCchHHHH
Confidence            999999999998888887777766542   2110                      123356677889999999999999


Q ss_pred             HHHHHHHHHHHHhhCCcccccchhhhhccCceEEEecCCCccccCceEEEEEEeCCeeecccccC-------CCCHHHHH
Q 044442          370 VTLTLAYSMKRMMADQVMVRKLSACETMGSATTIGTDKTGTLTENRMKVTKFWLGKELVKEADAS-------SVSPNIIK  442 (523)
Q Consensus       370 vtl~l~~~~~~m~~~~ilvr~~~~~E~lG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~-------~~~~~~~~  442 (523)
                      +++++++++++|.++|++||+++++|+||++++||||||||||+|+|+|+++|+++..+......       .......+
T Consensus       345 vti~l~~~~~~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  424 (1028)
T 2zxe_A          345 VTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWS  424 (1028)
T ss_dssp             HHHHHHHHHHHHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHH
T ss_pred             HHHHHHHHHHHHhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHH
Confidence            99999999999999999999999999999999999999999999999999999887654321100       00122233


Q ss_pred             HHHHHHhhccCccceeccCC---CceeEccChHHHHHHHHHHHHcCCChHHHhhccceeEEeCCCCCCceEEEEEcC
Q 044442          443 LIQEGVALNTTGSVYRETSV---SDVEFSGSPTEKAILSWAVLEMNMDMEEYSAISLAFFVISFMRKQMVKSTYNED  516 (523)
Q Consensus       443 ~l~~~i~~n~~~~~~~~~~~---~~~~~~GsptE~ALl~~a~~~lg~~~~~~~~~~~il~~~pFnS~rKrMSVIv~~  516 (523)
                      .+..+.++||++......+.   ...+..|||||.||++++ .+.+.+....+..|++++++||||+|||||+++++
T Consensus       425 ~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a-~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~  500 (1028)
T 2zxe_A          425 ALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCI-ELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHEN  500 (1028)
T ss_dssp             HHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHH-HHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEEC
T ss_pred             HHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHH-HHhCCCHHHHHHhCceEEEeccCcccceEEEEEec
Confidence            45556777776654322111   134578999999999999 46666788888899999999999999999999985
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A Back     alignment and structure
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Back     alignment and structure
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Back     alignment and structure
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Back     alignment and structure
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Back     alignment and structure
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Back     alignment and structure
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Back     alignment and structure
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Back     alignment and structure
>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Back     alignment and structure
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Back     alignment and structure
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Back     alignment and structure
>3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Back     alignment and structure
>4aqr_D Calcium-transporting ATPase 8, plasma membrane-TY; Ca-binding protein-hydrolase complex, plasma-membrane calciu; 1.95A {Arabidopsis thaliana} Back     alignment and structure
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Back     alignment and structure
>2l1w_B Vacuolar calcium ATPase BCA1 peptide; calmodulin, calmodulin complex, soybean calmodulin, vacuolar ATPase, metal binding protein; NMR {Glycine max} Back     alignment and structure
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 523
d1wpga4 472 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP 1e-24
d1wpga1115 b.82.7.1 (A:125-239) Calcium ATPase, transduction 3e-08
d1qyia_ 380 c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 1e-04
d1q3ia_214 d.220.1.1 (A:) Sodium/potassium-transporting ATPas 0.002
>d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Calcium ATPase, transmembrane domain M
superfamily: Calcium ATPase, transmembrane domain M
family: Calcium ATPase, transmembrane domain M
domain: Calcium ATPase, transmembrane domain M
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  104 bits (260), Expect = 1e-24
 Identities = 53/333 (15%), Positives = 96/333 (28%), Gaps = 88/333 (26%)

Query: 102 GVRGVASALETDFDAGICGSDQDIARRREAFGSNTYKKPPSKSLFYFVVDALKDLTILIL 161
                 +        G+  +   + R  E +G N       KSL+  V++  +DL + IL
Sbjct: 8   STEECLAYFGVSETTGL--TPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRIL 65

Query: 162 LGCAVLSLAFGIKEHG--LKEGWYDGGSILVLFGHCHFSWKQLYTDSTIGD-QVPADGLL 218
           L  A +S      E G      + +   IL++          L  ++ +G  Q       
Sbjct: 66  LLAACISFVLAWFEEGEETITAFVEPFVILLI----------LIANAIVGVWQERNAENA 115

Query: 219 LDGHSLQVDESSMTGESDHLEVNSSQNPFLFSGTKVAD--GYARMLATSVGMNTTWGQRM 276
           ++    + + ++   +   L+             +  +       L          G   
Sbjct: 116 IEALK-EYEPAATEQDKTPLQQKL---------DEFGEQLSKVISLICVAVWLINIGHFN 165

Query: 277 SQISRDNSEQTPLQARLNELTSSTGKIGLAVAFLVLVVLLLRYFTGNTTDENGNQEYNGS 336
             +   +  +  +                   F + V L                     
Sbjct: 166 DPVHGGSWIRGAIY-----------------YFKIAVAL--------------------- 187

Query: 337 KTKVDDIVNAVVGIVAATVTIIVVAIPEGLPLAVTLTLAYSMKRMMADQVMVRKLSACET 396
                                 V AIPEGLP  +T  LA   +RM     +VR L + ET
Sbjct: 188 ---------------------AVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVET 226

Query: 397 MGSATTIGTDK--TGTLTENRMKVTKFWLGKEL 427
           +G A      +     ++ N  +V   +L   L
Sbjct: 227 LGRAIYNNMKQFIRYLISSNVGEVVCIFLTAAL 259
>d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 Back     information, alignment and structure
>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 Back     information, alignment and structure
>d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query523
d1wpga4 472 Calcium ATPase, transmembrane domain M {Rabbit (Or 99.96
d1wpga1115 Calcium ATPase, transduction domain A {Rabbit (Ory 99.78
d1q3ia_214 Sodium/potassium-transporting ATPase alpha chain { 99.49
d1wpga3239 Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta 99.31
d1qyia_ 380 Hypothetical protein MW1667 (SA1546) {Staphylococc 97.45
>d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Calcium ATPase, transmembrane domain M
superfamily: Calcium ATPase, transmembrane domain M
family: Calcium ATPase, transmembrane domain M
domain: Calcium ATPase, transmembrane domain M
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.96  E-value=6.6e-31  Score=279.82  Aligned_cols=243  Identities=23%  Similarity=0.315  Sum_probs=183.6

Q ss_pred             HhhCCHHHHHHHhCCCcCCCCCCCHHHHHHHHHhcCCCccCCCCCCcHHHHHHHHHhhHHHHHHHHHHHHHhhhcccccC
Q 044442           98 HKFGGVRGVASALETDFDAGICGSDQDIARRREAFGSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHG  177 (523)
Q Consensus        98 ~~~g~~~~l~~~l~t~~~~GLs~~~~~v~~r~~~~G~N~i~~~~~~~~~~~~~~~f~~~~~~ill~~ailsl~~~i~~~g  177 (523)
                      |.. +++++++.|+||+++||+  ++|+++|+++||+|++++++++++|++++++|+|+++++|+++|++|+++|...++
T Consensus         5 h~~-~~e~v~~~l~td~~~GLs--~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~   81 (472)
T d1wpga4           5 HSK-STEECLAYFGVSETTGLT--PDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEG   81 (472)
T ss_dssp             GGS-CHHHHHHHHTCCTTTCBC--HHHHHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSCT
T ss_pred             hhC-CHHHHHHHhCcCcccCcC--HHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcc
Confidence            444 599999999999999999  78999999999999999999999999999999999999999999999999987665


Q ss_pred             Cc--ccccchhhhhhhhhhcc-cceee-ecCCCCCCCeeccCeEEEEecceEEeecccCCCCceeeecCCCCceEeeece
Q 044442          178 LK--EGWYDGGSILVLFGHCH-FSWKQ-LYTDSTIGDQVPADGLLLDGHSLQVDESSMTGESDHLEVNSSQNPFLFSGTK  253 (523)
Q Consensus       178 ~~--~~~~~~~~il~~vlvi~-~~~~q-~~GDL~~Gd~VPAD~ill~g~~l~VDeS~LTGES~pv~k~~~~~~~l~~GT~  253 (523)
                      ..  ..|+++++|++++++.+ .++.| .+-+    ..+.+.      ..  .+++                        
T Consensus        82 ~~~~~~~~~~~~I~~vv~~n~~i~~~qe~~a~----~~~~~l------~~--~~~~------------------------  125 (472)
T d1wpga4          82 EETITAFVEPFVILLILIANAIVGVWQERNAE----NAIEAL------KE--YEPA------------------------  125 (472)
T ss_dssp             TSTTSSSHHHHHHHHHHHHHHHHHHHHHHSCC----CHHHHH------GG--GSCC------------------------
T ss_pred             cccchhHhHhhhhhheeeeeeeEEeEEechHH----HHHHHH------hh--hccc------------------------
Confidence            43  47999988877775543 32222 2200    000000      00  0000                        


Q ss_pred             eecCcEEEEEEEecccchHHHHHHHhcccCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCCCccc
Q 044442          254 VADGYARMLATSVGMNTTWGQRMSQISRDNSEQTPLQARLNELTSSTGKIGLAVAFLVLVVLLLRYFTGNTTDENGNQEY  333 (523)
Q Consensus       254 v~~G~~~~~V~~tG~~T~~Gki~~~~~~~~~~~tplq~~l~~~~~~i~~i~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~  333 (523)
                                                 ....+++|+|.++++++..++..+.+++...+...+.     .....-...  
T Consensus       126 ---------------------------~~~~~~~P~d~~l~~~g~~i~~~~~~~~~~~~~~~~~-----~~~~~~~~~--  171 (472)
T d1wpga4         126 ---------------------------ATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIG-----HFNDPVHGG--  171 (472)
T ss_dssp             ---------------------------CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT-----TSSSCCSSS--
T ss_pred             ---------------------------cccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHhhh--
Confidence                                       1123468999999999998888766655554443221     111100000  


Q ss_pred             CCCCcchhhHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhCCcccccchhhhhccCceEEEecCC--Ccc
Q 044442          334 NGSKTKVDDIVNAVVGIVAATVTIIVVAIPEGLPLAVTLTLAYSMKRMMADQVMVRKLSACETMGSATTIGTDKT--GTL  411 (523)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~gLplavtl~l~~~~~~m~~~~ilvr~~~~~E~lG~v~~IcsDKT--GTL  411 (523)
                              ++.+.+...+..+++++|+++|||||+++|++++++++||+|+|++||++++||++|+.+++|+|||  +||
T Consensus       172 --------~~~~~~~~~~~~ai~l~V~~iPEgLp~~vti~La~~~~rmak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l  243 (472)
T d1wpga4         172 --------SWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLI  243 (472)
T ss_dssp             --------CSSSCGGGHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESCTTHHHHHTHHHHHHHHHHHHHHH
T ss_pred             --------hhHHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHhHHhhhhhh
Confidence                    1112345567889999999999999999999999999999999999999999999999999999998  999


Q ss_pred             ccCceEEEEE
Q 044442          412 TENRMKVTKF  421 (523)
Q Consensus       412 T~n~m~v~~~  421 (523)
                      |.|.+++..+
T Consensus       244 ~~n~~~v~~~  253 (472)
T d1wpga4         244 SSNVGEVVCI  253 (472)
T ss_dssp             HHHHHHHHHH
T ss_pred             hhhHHHHHHH
Confidence            9999877554
>d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure