Citrus Sinensis ID: 044484


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------
MGVKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALPFHSNSATVFPSNSIHIPTTAPELPPRVGPISVGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDKDSNRMTLSRKVAAGLISGAVGATVGNPADVAMVRMQADGRLPPAQRRNYKSVIDAITQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGFVASVASNPVDVIKTRVMNMTVEAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLLKEF
cccHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccEEEEHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccccccccccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHcccHHcHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccccccccccccHHHHHHHHHHHHcccccccccHHHHHcHHHHHHHHHHHHHHHHHHHHHc
ccHHHHHHHHHHHHHHHHHcccHHHEEEHHHHccccccccccccHHHHHHccccccHHcccHHHHccccccccccccccHHHHHHHHHHHccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHcccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHccccccccccccHHHHHHHHHHHcccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcc
MGVKGFVEGGIASIVAGCSTHPLDLIKVRMQLqgenvavpqqvhslrpalpfhsnsatvfpsnsihipttapelpprvgpisvGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDVLkqkwtdkdsnrmtlSRKVAAGLISgavgatvgnpADVAMVRMqadgrlppaqrrNYKSVIDAITQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKkgvmrdglgthVTASFAAGFVasvasnpvdVIKTRVMNMtveagrdppykgaLDCALKTvraegpmalykgfiptisrqgpfTVVLFVTLEQVRKLLKEF
MGVKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALPFHSNSATVFPSNSIHIPTTAPELPPRVGPISVGVKIFQTEGVAALFSGVSATVLRQTLysttrmglydvlkqkwtdkdsnrMTLSRKVAAGLISGAVGATVGNPADVAMVRMQADgrlppaqrrNYKSVIDAITQMLRQEGVASLWRGSSLTVNRAMIvtasqlatydQVKEMILKKGVMRDGLGTHVTASFAAGfvasvasnpvdVIKTRVMNMtveagrdppykgALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLLKEF
MGVKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALPFHSNSATVFPSNSIHIPTTAPELPPRVGPISVGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDKDSNRMTLSRKVAAGLISGAVGATVGNPADVAMVRMQADGRLPPAQRRNYKSVIDAITQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTasfaagfvasvasNPVDVIKTRVMNMTVEAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLLKEF
****GFVEGGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALPFH***ATVFPSNSIHIPTTA*ELPPRVGPISVGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDKDSNRMTLSRKVAAGLISGAVGATVGNPADVAMVRM***********RNYKSVIDAITQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGFVASVASNPVDVIKTRVMNMTVEAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKL****
MGVKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGENVA*PQQ**SLRPALPFHSNSATVFPSNSIHI*******PPRVGPISVGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDVLKQKW*****NRMTLSRKVAAGLISGAVGATVGNPADVAMVRMQADG******RRNYKSVIDAITQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGFVASVASNPVDVIKTRV**************GALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLLKEF
MGVKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALPFHSNSATVFPSNSIHIPTTAPELPPRVGPISVGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDKDSNRMTLSRKVAAGLISGAVGATVGNPADVAMVRMQADGRLPPAQRRNYKSVIDAITQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGFVASVASNPVDVIKTRVMNMTVEAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLLKEF
MGVKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALPFHSNSATVFPSNSIHIPTTAPELPPRVGPISVGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDKDSNRMTLSRKVAAGLISGAVGATVGNPADVAMVRMQADGRLPPAQRRNYKSVIDAITQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGFVASVASNPVDVIKTRVMNMTVEAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLLKEF
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MGVKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALPFHSNSATVFPSNSIHIPTTAPELPPRVGPISVGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDKDSNRMTLSRKVAAGLISGAVGATVGNPADVAMVRMQADGRLPPAQRRNYKSVIDAITQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASFAAGFVASVASNPVDVIKTRVMNMTVEAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKLLKEF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query327 2.2.26 [Sep-21-2011]
Q9SB52313 Mitochondrial uncoupling yes no 0.957 1.0 0.703 1e-129
Q9SJY5313 Mitochondrial uncoupling no no 0.951 0.993 0.718 1e-126
Q9FY68337 Mitochondrial uncoupling no no 0.972 0.943 0.596 9e-98
Q54PY7318 Probable mitochondrial 2- yes no 0.880 0.905 0.435 3e-67
Q9CR62314 Mitochondrial 2-oxoglutar yes no 0.874 0.910 0.406 9e-63
Q02978314 Mitochondrial 2-oxoglutar yes no 0.871 0.907 0.401 3e-61
P22292314 Mitochondrial 2-oxoglutar yes no 0.871 0.907 0.398 5e-61
P97700314 Mitochondrial 2-oxoglutar yes no 0.874 0.910 0.394 2e-59
Q5XGI1291 Kidney mitochondrial carr no no 0.871 0.979 0.379 2e-55
Q8HXE3291 Kidney mitochondrial carr N/A no 0.871 0.979 0.379 2e-54
>sp|Q9SB52|PUMP4_ARATH Mitochondrial uncoupling protein 4 OS=Arabidopsis thaliana GN=PUMP4 PE=2 SV=1 Back     alignment and function desciption
 Score =  461 bits (1187), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 230/327 (70%), Positives = 265/327 (81%), Gaps = 14/327 (4%)

Query: 1   MGVKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALPFHSNSATVF 60
           MGVK FVEGGIAS++AGCSTHPLDLIKVR+QL GE  +    V  LRPAL F ++S   F
Sbjct: 1   MGVKSFVEGGIASVIAGCSTHPLDLIKVRLQLHGEAPST-TTVTLLRPALAFPNSSPAAF 59

Query: 61  PSNSIHIPTTAPELPPRVGPISVGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDV 120
              +  +P        +VGPIS+G+ I ++EG AALFSGVSAT+LRQTLYSTTRMGLY+V
Sbjct: 60  LETTSSVP--------KVGPISLGINIVKSEGAAALFSGVSATLLRQTLYSTTRMGLYEV 111

Query: 121 LKQKWTDKDSNRMTLSRKVAAGLISGAVGATVGNPADVAMVRMQADGRLPPAQRRNYKSV 180
           LK KWTD +S ++ LSRK+ AGL++G +GA VGNPADVAMVRMQADGRLP AQRRNY  V
Sbjct: 112 LKNKWTDPESGKLNLSRKIGAGLVAGGIGAAVGNPADVAMVRMQADGRLPLAQRRNYAGV 171

Query: 181 IDAITQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVT 240
            DAI  M++ EGV SLWRGS+LT+NRAMIVTA+QLA+YDQ KE IL+ GVM DGLGTHV 
Sbjct: 172 GDAIRSMVKGEGVTSLWRGSALTINRAMIVTAAQLASYDQFKEGILENGVMNDGLGTHVV 231

Query: 241 ASFAAGFVASVASNPVDVIKTRVMNMTVEAGRDPPYKGALDCALKTVRAEGPMALYKGFI 300
           ASFAAGFVASVASNPVDVIKTRVMNM V A     Y GA DCA+KTV+AEG MALYKGF+
Sbjct: 232 ASFAAGFVASVASNPVDVIKTRVMNMKVGA-----YDGAWDCAVKTVKAEGAMALYKGFV 286

Query: 301 PTISRQGPFTVVLFVTLEQVRKLLKEF 327
           PT+ RQGPFTVVLFVTLEQVRKLL++F
Sbjct: 287 PTVCRQGPFTVVLFVTLEQVRKLLRDF 313




PUMPS are mitochondrial transporter proteins that create proton leaks across the inner mitochondrial membrane, thus uncoupling oxidative phosphorylation. This leads to a decrease in the efficiency of oxidative phosphorylation and an increase in heat production. May be involved in protecting plant cells against oxidative stress damage (By similarity). Recombinant PUMP4, reconstituted into liposomes, transports a wide range of dicarboxylic acids including malate, oxaloacetate and succinate as well as phosphate, sulfate and thiosulfate. However, it is unknown if these transports are of any biological significance in vivo.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9SJY5|PUMP5_ARATH Mitochondrial uncoupling protein 5 OS=Arabidopsis thaliana GN=PUMP5 PE=2 SV=1 Back     alignment and function description
>sp|Q9FY68|PUMP6_ARATH Mitochondrial uncoupling protein 6 OS=Arabidopsis thaliana GN=PUMP6 PE=2 SV=1 Back     alignment and function description
>sp|Q54PY7|M2OM_DICDI Probable mitochondrial 2-oxoglutarate/malate carrier protein OS=Dictyostelium discoideum GN=ucpC PE=3 SV=1 Back     alignment and function description
>sp|Q9CR62|M2OM_MOUSE Mitochondrial 2-oxoglutarate/malate carrier protein OS=Mus musculus GN=Slc25a11 PE=1 SV=3 Back     alignment and function description
>sp|Q02978|M2OM_HUMAN Mitochondrial 2-oxoglutarate/malate carrier protein OS=Homo sapiens GN=SLC25A11 PE=1 SV=3 Back     alignment and function description
>sp|P22292|M2OM_BOVIN Mitochondrial 2-oxoglutarate/malate carrier protein OS=Bos taurus GN=SLC25A11 PE=1 SV=3 Back     alignment and function description
>sp|P97700|M2OM_RAT Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus GN=Slc25a11 PE=2 SV=3 Back     alignment and function description
>sp|Q5XGI1|KMCP1_XENTR Kidney mitochondrial carrier protein 1 OS=Xenopus tropicalis GN=slc25a30 PE=2 SV=1 Back     alignment and function description
>sp|Q8HXE3|KMCP1_MACFA Kidney mitochondrial carrier protein 1 OS=Macaca fascicularis GN=SLC25A30 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query327
449451397324 PREDICTED: mitochondrial uncoupling prot 0.990 1.0 0.822 1e-150
255579712319 mitochondrial dicarboxylate carrier prot 0.975 1.0 0.807 1e-144
225459119323 PREDICTED: probable mitochondrial 2-oxog 0.984 0.996 0.801 1e-143
224093316322 predicted protein [Populus trichocarpa] 0.981 0.996 0.762 1e-143
224099879322 predicted protein [Populus trichocarpa] 0.978 0.993 0.762 1e-142
224081955321 predicted protein [Populus trichocarpa] 0.981 1.0 0.801 1e-142
118487428322 unknown [Populus trichocarpa] 0.978 0.993 0.759 1e-142
356497159317 PREDICTED: probable mitochondrial 2-oxog 0.969 1.0 0.798 1e-141
224140749322 predicted protein [Populus trichocarpa] 0.981 0.996 0.774 1e-141
255545926317 mitochondrial dicarboxylate carrier prot 0.969 1.0 0.792 1e-141
>gi|449451397|ref|XP_004143448.1| PREDICTED: mitochondrial uncoupling protein 5-like [Cucumis sativus] gi|449518847|ref|XP_004166447.1| PREDICTED: mitochondrial uncoupling protein 5-like [Cucumis sativus] Back     alignment and taxonomy information
 Score =  535 bits (1379), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 269/327 (82%), Positives = 290/327 (88%), Gaps = 3/327 (0%)

Query: 1   MGVKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALPFHSNSATVF 60
           MGVKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGE  A    VH+LRPAL F + S T  
Sbjct: 1   MGVKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGETPAPTAAVHNLRPALAFQTTSVTA- 59

Query: 61  PSNSIHIPTTAPELPPRVGPISVGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDV 120
              SI+IP   P    RVGPI+VGV+I Q EGVAALFSGVSATVLRQTLYSTTRMGLYD+
Sbjct: 60  -PKSINIPPPPPPPA-RVGPIAVGVRIVQQEGVAALFSGVSATVLRQTLYSTTRMGLYDI 117

Query: 121 LKQKWTDKDSNRMTLSRKVAAGLISGAVGATVGNPADVAMVRMQADGRLPPAQRRNYKSV 180
           LKQKWTD+D+ +M L RK++AGLI+GAVGA VGNPADVAMVRMQADGRLP AQRRNYKSV
Sbjct: 118 LKQKWTDQDTGKMPLIRKISAGLIAGAVGAAVGNPADVAMVRMQADGRLPLAQRRNYKSV 177

Query: 181 IDAITQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVT 240
           +DAITQM R EGV SLWRGSSLTVNRAM+VTASQLA+YDQ+KE IL+KG+M+DGLGTHVT
Sbjct: 178 VDAITQMARGEGVTSLWRGSSLTVNRAMLVTASQLASYDQIKETILQKGLMKDGLGTHVT 237

Query: 241 ASFAAGFVASVASNPVDVIKTRVMNMTVEAGRDPPYKGALDCALKTVRAEGPMALYKGFI 300
           ASFAAGFVASVASNPVDVIKTRVMNM VEAG  PPY GALDCALKTVRAEGPMALYKGFI
Sbjct: 238 ASFAAGFVASVASNPVDVIKTRVMNMKVEAGAAPPYSGALDCALKTVRAEGPMALYKGFI 297

Query: 301 PTISRQGPFTVVLFVTLEQVRKLLKEF 327
           PTISRQGPFTVVLFVTLEQVRK+LK+F
Sbjct: 298 PTISRQGPFTVVLFVTLEQVRKVLKDF 324




Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255579712|ref|XP_002530695.1| mitochondrial dicarboxylate carrier protein, putative [Ricinus communis] gi|223529751|gb|EEF31690.1| mitochondrial dicarboxylate carrier protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225459119|ref|XP_002285693.1| PREDICTED: probable mitochondrial 2-oxoglutarate/malate carrier protein-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224093316|ref|XP_002309878.1| predicted protein [Populus trichocarpa] gi|222852781|gb|EEE90328.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224099879|ref|XP_002334433.1| predicted protein [Populus trichocarpa] gi|222872737|gb|EEF09868.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224081955|ref|XP_002306542.1| predicted protein [Populus trichocarpa] gi|222855991|gb|EEE93538.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|118487428|gb|ABK95542.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356497159|ref|XP_003517430.1| PREDICTED: probable mitochondrial 2-oxoglutarate/malate carrier protein-like [Glycine max] Back     alignment and taxonomy information
>gi|224140749|ref|XP_002323741.1| predicted protein [Populus trichocarpa] gi|222866743|gb|EEF03874.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255545926|ref|XP_002514023.1| mitochondrial dicarboxylate carrier protein, putative [Ricinus communis] gi|223547109|gb|EEF48606.1| mitochondrial dicarboxylate carrier protein, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query327
TAIR|locus:2041183313 UCP5 "uncoupling protein 5" [A 0.951 0.993 0.688 2.6e-111
TAIR|locus:2121974313 DIC2 "dicarboxylate carrier 2" 0.957 1.0 0.669 3e-108
TAIR|locus:2184832337 DIC3 "dicarboxylate carrier 3" 0.972 0.943 0.570 1.4e-89
DICTYBASE|DDB_G0284225318 ucpC "mitochondrial brown fat 0.764 0.786 0.450 1.8e-64
MGI|MGI:1915113314 Slc25a11 "solute carrier famil 0.727 0.757 0.443 5.4e-57
UNIPROTKB|E2R578314 SLC25A11 "Uncharacterized prot 0.727 0.757 0.439 6.9e-57
UNIPROTKB|F1RFX9307 SLC25A11 "Uncharacterized prot 0.718 0.765 0.440 1.1e-56
ZFIN|ZDB-GENE-040625-79308 slc25a11 "solute carrier famil 0.740 0.785 0.426 1.8e-56
UNIPROTKB|P22292314 SLC25A11 "Mitochondrial 2-oxog 0.733 0.764 0.427 4.8e-56
UNIPROTKB|Q02978314 SLC25A11 "Mitochondrial 2-oxog 0.727 0.757 0.435 1.3e-55
TAIR|locus:2041183 UCP5 "uncoupling protein 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1099 (391.9 bits), Expect = 2.6e-111, P = 2.6e-111
 Identities = 225/327 (68%), Positives = 260/327 (79%)

Query:     1 MGVKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALPFHSNSATVF 60
             MG+KGF EGGIASIVAGCSTHPLDLIKVRMQLQGE+   P Q + LRPAL F + S TV 
Sbjct:     1 MGLKGFAEGGIASIVAGCSTHPLDLIKVRMQLQGESA--PIQTN-LRPALAFQT-STTV- 55

Query:    61 PSNSIHIPTTAPELPPRVGPISVGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDV 120
                       AP  P RVG I VG ++ + EG+ ALFSGVSATVLRQTLYSTTRMGLYD+
Sbjct:    56 ---------NAP--PLRVGVIGVGSRLIREEGMRALFSGVSATVLRQTLYSTTRMGLYDI 104

Query:   121 LKQKWTDKDSNRMTLSRKVAAGLISGAVGATVGNPADVAMVRMQADGRLPPAQRRNYKSV 180
             +K +WTD ++  M L +K+ AG I+GA+GA VGNPADVAMVRMQADGRLP   RRNYKSV
Sbjct:   105 IKGEWTDPETKTMPLMKKIGAGAIAGAIGAAVGNPADVAMVRMQADGRLPLTDRRNYKSV 164

Query:   181 IDAITQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVT 240
             +DAITQM+R EGV SLWRGSSLT+NRAM+VT+SQLA+YD VKE IL+KG+++DGLGTHV+
Sbjct:   165 LDAITQMIRGEGVTSLWRGSSLTINRAMLVTSSQLASYDSVKETILEKGLLKDGLGTHVS 224

Query:   241 XXXXXXXXXXXXXNPVDVIKTRVMNMTVEAGRDPPYKGALDCALKTVRAEGPMALYKGFI 300
                          NPVDVIKTRVMNM V AG  PPYKGA+DCALKTV+AEG M+LYKGFI
Sbjct:   225 ASFAAGFVASVASNPVDVIKTRVMNMKVVAGVAPPYKGAVDCALKTVKAEGIMSLYKGFI 284

Query:   301 PTISRQGPFTVVLFVTLEQVRKLLKEF 327
             PT+SRQ PFTVVLFVTLEQV+KL K++
Sbjct:   285 PTVSRQAPFTVVLFVTLEQVKKLFKDY 311




GO:0005739 "mitochondrion" evidence=ISM
GO:0005743 "mitochondrial inner membrane" evidence=ISS
GO:0006810 "transport" evidence=ISS
GO:0006839 "mitochondrial transport" evidence=ISS;IDA
GO:0031966 "mitochondrial membrane" evidence=IEA
GO:0015992 "proton transport" evidence=IDA
GO:0017077 "oxidative phosphorylation uncoupler activity" evidence=IDA
GO:0005310 "dicarboxylic acid transmembrane transporter activity" evidence=IDA
GO:0010200 "response to chitin" evidence=RCA
TAIR|locus:2121974 DIC2 "dicarboxylate carrier 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2184832 DIC3 "dicarboxylate carrier 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0284225 ucpC "mitochondrial brown fat uncoupling family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
MGI|MGI:1915113 Slc25a11 "solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E2R578 SLC25A11 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1RFX9 SLC25A11 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040625-79 slc25a11 "solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|P22292 SLC25A11 "Mitochondrial 2-oxoglutarate/malate carrier protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q02978 SLC25A11 "Mitochondrial 2-oxoglutarate/malate carrier protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q06143DIC1_YEASTNo assigned EC number0.35750.81650.8959yesno
Q6FTN2DIC1_CANGANo assigned EC number0.35220.82260.9118yesno
Q9CR62M2OM_MOUSENo assigned EC number0.40680.87460.9108yesno
Q9SJY5PUMP5_ARATHNo assigned EC number0.71860.95100.9936nono
P22292M2OM_BOVINNo assigned EC number0.39870.87150.9076yesno
Q9SB52PUMP4_ARATHNo assigned EC number0.70330.95711.0yesno
Q54PY7M2OM_DICDINo assigned EC number0.43510.88070.9056yesno
P97700M2OM_RATNo assigned EC number0.39440.87460.9108yesno
Q02978M2OM_HUMANNo assigned EC number0.40180.87150.9076yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
fgenesh4_pg.C_LG_VII000311
hypothetical protein (322 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query327
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-22
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 3e-22
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 5e-17
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 7e-14
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 3e-12
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 89.2 bits (222), Expect = 2e-22
 Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 3/99 (3%)

Query: 131 NRMTLSRKVAAGLISGAVGATVGNPADVAMVRMQADGRLPPAQRRNYKSVIDAITQMLRQ 190
           + ++    + AG I+GA+ ATV  P DV   R+Q          R YK ++D   ++ ++
Sbjct: 1   SPLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQ---SSAAGGSRKYKGILDCFKKIYKE 57

Query: 191 EGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKG 229
           EG+  L++G    + R     A    TY+ +K+++LKK 
Sbjct: 58  EGIRGLYKGLLPNLLRVAPAAAIYFGTYETLKKLLLKKL 96


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 327
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 100.0
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 100.0
KOG0750304 consensus Mitochondrial solute carrier protein [En 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764 299 consensus Mitochondrial FAD carrier protein [Energ 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0757 319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0760 302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 99.98
PTZ00168259 mitochondrial carrier protein; Provisional 99.97
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 99.97
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 99.97
KOG1519297 consensus Predicted mitochondrial carrier protein 99.97
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 99.96
KOG0770 353 consensus Predicted mitochondrial carrier protein 99.95
KOG0765333 consensus Predicted mitochondrial carrier protein 99.95
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 99.95
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.94
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.94
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.94
KOG0769 308 consensus Predicted mitochondrial carrier protein 99.93
KOG0036463 consensus Predicted mitochondrial carrier protein 99.93
KOG0766 297 consensus Predicted mitochondrial carrier protein 99.92
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.92
KOG0767 333 consensus Mitochondrial phosphate carrier protein 99.92
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.92
KOG2745321 consensus Mitochondrial carrier protein [General f 99.89
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.77
KOG2745321 consensus Mitochondrial carrier protein [General f 99.73
KOG1519297 consensus Predicted mitochondrial carrier protein 99.71
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.69
KOG2954427 consensus Mitochondrial carrier protein [General f 99.62
KOG2954427 consensus Mitochondrial carrier protein [General f 98.63
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
Probab=100.00  E-value=6.4e-59  Score=381.87  Aligned_cols=284  Identities=25%  Similarity=0.369  Sum_probs=251.1

Q ss_pred             chhhhHHHhhHHHhHhhhcchhhHHHHHHhhcCcccccccccccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCcChH
Q 044484            2 GVKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALPFHSNSATVFPSNSIHIPTTAPELPPRVGPI   81 (327)
Q Consensus         2 ~~~~~~~g~~a~~~~~~~~~Pld~vk~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (327)
                      -+.++++|.+||+++..++||||++|+|+|++.....                                  ..+.+++.+
T Consensus         5 ~~~~~iaG~~aG~~stl~vhPlDl~K~R~qa~~g~~~----------------------------------~~~~y~g~~   50 (299)
T KOG0764|consen    5 QWEPLIAGLSAGFASTLVVHPLDLVKIRFQASDGRTS----------------------------------LRPAYKGIF   50 (299)
T ss_pred             chhhhhhhhhhhhhhhhhccchhHhhhhhhhccCccc----------------------------------cchhhccHH
Confidence            3678899999999999999999999999999832110                                  034478999


Q ss_pred             HHHHHHHHhhcHhhhhcChhHHHHHHhhhchhhHhhHHHHHHhhcccCCC-ccchHHHHHHHHHHHHHHhhhcCcHHHHH
Q 044484           82 SVGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDKDSN-RMTLSRKVAAGLISGAVGATVGNPADVAM  160 (327)
Q Consensus        82 ~~~~~i~~~~G~~gly~G~~~~l~~~~~~~~~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~a~~~~~~~~~Pld~ik  160 (327)
                      ++++.|+|.||++|||+|+.|++++..+++++||.+|+.+|..+.+.... ..++...+.+++.||+++.++++|++++|
T Consensus        51 ~~~~tI~r~eG~rGLY~Gl~P~v~G~~~sWgiYF~~Y~~~K~~~~~~~~~~~l~~~~~l~sa~~AGa~t~~lTNPIWVvK  130 (299)
T KOG0764|consen   51 GALKTIFRSEGLRGLYRGLSPNVLGSAPSWGLYFFFYDFLKSFITEGFNSGLLSVLANLSSAAEAGAATTILTNPIWVVK  130 (299)
T ss_pred             HHHHHHHHhhhHHHHhccCcHHHHhchhhHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHHhhhHHHHHhcCCeEEEe
Confidence            99999999999999999999999999999999999999999999774333 34889999999999999999999999999


Q ss_pred             HHHhcCCCCCCcccCCCccHHHHHHHHHHhhchhhccccchhhhhhHHHHhhHHHHHHHHHHHHHHhcCCCC-C---Chh
Q 044484          161 VRMQADGRLPPAQRRNYKSVIDAITQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMR-D---GLG  236 (327)
Q Consensus       161 ~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~lyrG~~~~l~~~~~~~~~~~~~y~~~~~~~~~~~~~~-~---~~~  236 (327)
                      +|++.+...  .+..+|+++++++++|+++||++|||+|+.|.++ .+.+.+++|..||.+|....+....+ +   +-.
T Consensus       131 TRL~~Q~~~--~~~~~Y~~~f~a~rki~k~EG~rgLY~GlVP~L~-GvshgAiQF~~YE~lK~~~~~~~~~~~d~~l~n~  207 (299)
T KOG0764|consen  131 TRLMLQSKN--VQSTAYKGMFDALRKIYKEEGFRGLYKGLVPGLL-GVSHGAIQFPAYEELKLRKNRKQGRSTDNHLSNL  207 (299)
T ss_pred             ehhhhhccc--ccccccccHHHHHHHHHHHHhHHHHHhhhhhHhh-hhchhhhhhhhHHHHHHHHHHhcCCCcccchhhH
Confidence            999998762  2346899999999999999999999999999999 78899999999999999986543322 2   235


Q ss_pred             hHHHHHHHHHHhhhhccchhHHHHHHHhhccccCCCCCCCCCHHHHHHHHHHhhCccccccchhHHHhhhccchhHHHHH
Q 044484          237 THVTASFAAGFVASVASNPVDVIKTRVMNMTVEAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVT  316 (327)
Q Consensus       237 ~~~~~g~~ag~~~~~~~~Pld~i~~r~q~~~~~~~~~~~~~~~~~~~~~i~~~eG~~~ly~G~~~~~~~~~~~~~i~~~~  316 (327)
                      ..+..+.++.++++.+|||++|+|+|||.+..    .++|++++++++++||.||++|||+|+.++++|.+|.+.|+|..
T Consensus       208 ~~i~~as~SKv~Ast~TYP~qVlRtRLQ~~~~----~~~~~~~~~lIk~t~r~eG~~GfYkG~~~nLvR~vPA~~ITF~v  283 (299)
T KOG0764|consen  208 DYIALASLSKVFASTLTYPHQVLRTRLQDQSD----NPRYRGVFDLIKKTWRNEGFRGFYKGLATNLVRTVPAACITFLV  283 (299)
T ss_pred             HHHHHHHHHHHHHHHhcchHHHHHHHHHhccc----CcccccHHHHHHHHHHHhchhhHHHHhHHHHhhccccceeeeeh
Confidence            56666669999999999999999999998853    46899999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhh
Q 044484          317 LEQVRKLLKE  326 (327)
Q Consensus       317 ye~~~~~~~~  326 (327)
                      ||.++++|..
T Consensus       284 yEnv~~~L~~  293 (299)
T KOG0764|consen  284 YENVKHFLVT  293 (299)
T ss_pred             HHHHHHHHhc
Confidence            9999998864



>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query327
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 2e-46
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 1e-16
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Iteration: 1

Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 114/324 (35%), Positives = 168/324 (51%), Gaps = 38/324 (11%) Query: 1 MGVKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALPFHSNSATVF 60 M VK F+ G A+ +A T PLD KVR+Q+QGE+ + + Sbjct: 1 MTVK-FLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVR------------------- 40 Query: 61 PSNSIHIPTTAPELPPRVGPISVGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDV 120 TA R G + + + +TEG +L++G+ A + RQ +++ R+GLYD Sbjct: 41 ---------TAASAQYR-GVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDS 90 Query: 121 LKQKWTDKDSNRMTLSRKVAAGLISGAVGATVGNPADVAMVRMQADGRLPPAQRRNYKSV 180 +KQ +T K S + ++ AG +GA+ V P DV VR QA R +R Y+S Sbjct: 91 VKQFYT-KGSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRR--YQST 147 Query: 181 IDAITQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVT 240 ++A + R+EG+ LW+G+S V R IV ++L TYD +K+ +LK +M D L H T Sbjct: 148 VEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLMTDDLPCHFT 207 Query: 241 XXXXXXXXXXXXXNPVDVIKTRVMNMTVEAGRDPPYKGALDCALKTVRAEGPMALYKGFI 300 +PVDV+KTR MN + Y A CAL +R EGP A YKGF+ Sbjct: 208 SAFGAGFCTTVIASPVDVVKTRYMNSAL-----GQYHSAGHCALTMLRKEGPRAFYKGFM 262 Query: 301 PTISRQGPFTVVLFVTLEQVRKLL 324 P+ R G + VV+FVT EQ+++ L Sbjct: 263 PSFLRLGSWNVVMFVTYEQLKRAL 286
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query327
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 1e-135
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 9e-37
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-52
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 5e-40
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
 Score =  385 bits (992), Expect = e-135
 Identities = 117/327 (35%), Positives = 175/327 (53%), Gaps = 38/327 (11%)

Query: 1   MGVKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALPFHSNSATVF 60
           M VK F+  G A+ +A   T PLD  KVR+Q+QGE+  + +                   
Sbjct: 1   MTVK-FLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVR------------------- 40

Query: 61  PSNSIHIPTTAPELPPRVGPISVGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDV 120
                    TA     R G +   + + +TEG  +L++G+ A + RQ  +++ R+GLYD 
Sbjct: 41  ---------TAASAQYR-GVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDS 90

Query: 121 LKQKWTDKDSNRMTLSRKVAAGLISGAVGATVGNPADVAMVRMQADGRLPPAQRRNYKSV 180
           +KQ +T    +   +  ++ AG  +GA+   V  P DV  VR QA  R      R Y+S 
Sbjct: 91  VKQFYTKGSEH-AGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGG--GRRYQST 147

Query: 181 IDAITQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVT 240
           ++A   + R+EG+  LW+G+S  V R  IV  ++L TYD +K+ +LK  +M D L  H T
Sbjct: 148 VEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLMTDDLPCHFT 207

Query: 241 ASFAAGFVASVASNPVDVIKTRVMNMTVEAGRDPPYKGALDCALKTVRAEGPMALYKGFI 300
           ++F AGF  +V ++PVDV+KTR MN  +       Y  A  CAL  +R EGP A YKGF+
Sbjct: 208 SAFGAGFCTTVIASPVDVVKTRYMNSAL-----GQYHSAGHCALTMLRKEGPRAFYKGFM 262

Query: 301 PTISRQGPFTVVLFVTLEQVRKLLKEF 327
           P+  R G + VV+FVT EQ+++ L   
Sbjct: 263 PSFLRLGSWNVVMFVTYEQLKRALMAA 289


>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query327
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=5.2e-57  Score=400.14  Aligned_cols=285  Identities=39%  Similarity=0.674  Sum_probs=252.2

Q ss_pred             hhhHHHhhHHHhHhhhcchhhHHHHHHhhcCcccccccccccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCcChHHH
Q 044484            4 KGFVEGGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALPFHSNSATVFPSNSIHIPTTAPELPPRVGPISV   83 (327)
Q Consensus         4 ~~~~~g~~a~~~~~~~~~Pld~vk~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (327)
                      .++++|++||+++.+++||||+||+|+|++........                             ......+++.+++
T Consensus         3 ~~~~aG~~ag~~~~~~~~Pld~iKtrlQ~~~~~~~~~~-----------------------------~~~~~~~~~~~~~   53 (303)
T 2lck_A            3 VKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVR-----------------------------TAASAQYRGVLGT   53 (303)
T ss_dssp             CHHHHHHHHHHHHHHTTHHHHHHHHHSSCCTTCCSHHH-----------------------------HCSCSSCSCHHHH
T ss_pred             hhHHhHHHHHHHHHHHcCcHHHHHHHHHhhhccccccc-----------------------------cccCCCCCCHHHH
Confidence            57999999999999999999999999999865210000                             0002346799999


Q ss_pred             HHHHHHhhcHhhhhcChhHHHHHHhhhchhhHhhHHHHHHhhcccCCCccchHHHHHHHHHHHHHHhhhcCcHHHHHHHH
Q 044484           84 GVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDKDSNRMTLSRKVAAGLISGAVGATVGNPADVAMVRM  163 (327)
Q Consensus        84 ~~~i~~~~G~~gly~G~~~~l~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~Pld~ik~r~  163 (327)
                      +++|+++||++|||||+.+++++.++..+++|.+||.+++.+.+..+ ..+....+++|++|++++.++++|+|++|+|+
T Consensus        54 ~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~~~~~~~-~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrl  132 (303)
T 2lck_A           54 ILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSE-HAGIGSRLLAGSTTGALAVAVAQPTDVVKVRF  132 (303)
T ss_dssp             HHHHHHHHCHHHHHSSHHHHHHHHHHHHHHTTTHHHHHHHHHSCCCS-SCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred             HHHHHHhhCHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-CCcHHHHHHHHHHHHHHHHHHcCcHHHHHHHH
Confidence            99999999999999999999999999999999999999999876422 46678899999999999999999999999999


Q ss_pred             hcCCCCCCcccCCCccHHHHHHHHHHhhchhhccccchhhhhhHHHHhhHHHHHHHHHHHHHHhcCCCCCChhhHHHHHH
Q 044484          164 QADGRLPPAQRRNYKSVIDAITQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTHVTASF  243 (327)
Q Consensus       164 q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~lyrG~~~~l~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~g~  243 (327)
                      |++...  .....|++.++++++|+++||+++||||+.+++++.+|+.+++|.+||.+++.+.+....+.+....+++|+
T Consensus       133 q~~~~~--~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~~~~~~~~~~~~~~g~  210 (303)
T 2lck_A          133 QAQARA--GGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLMTDDLPCHFTSAF  210 (303)
T ss_dssp             HHSCSC--CCSSSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTSCCSCHHHHHHHHH
T ss_pred             hccccc--CCCCCCCCHHHHHHHHHHhcChhhhhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHH
Confidence            998642  123578999999999999999999999999999999999999999999999988765444566788999999


Q ss_pred             HHHHhhhhccchhHHHHHHHhhccccCCCCCCCCCHHHHHHHHHHhhCccccccchhHHHhhhccchhHHHHHHHHHHHH
Q 044484          244 AAGFVASVASNPVDVIKTRVMNMTVEAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLEQVRKL  323 (327)
Q Consensus       244 ~ag~~~~~~~~Pld~i~~r~q~~~~~~~~~~~~~~~~~~~~~i~~~eG~~~ly~G~~~~~~~~~~~~~i~~~~ye~~~~~  323 (327)
                      +||++++++++|+|+||+|+|.+..     ..|.++++|+++|+++||++|||||+.++++|.+|.++++|.+||.+++.
T Consensus       211 ~ag~~~~~~~~P~dvvktrlq~~~~-----~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~~k~~  285 (303)
T 2lck_A          211 GAGFCTTVIASPVDVVKTRYMNSAL-----GQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRA  285 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCS-----SSCCSHHHHHHHHHHSSCTHHHHSCCHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHcCHHHHHHHHHHhccc-----cccCCHHHHHHHHHHHcChHHhhccHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            9999999999999999999999764     36999999999999999999999999999999999999999999999977


Q ss_pred             Hh
Q 044484          324 LK  325 (327)
Q Consensus       324 ~~  325 (327)
                      +.
T Consensus       286 l~  287 (303)
T 2lck_A          286 LM  287 (303)
T ss_dssp             CC
T ss_pred             HH
Confidence            64



>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 327
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 1e-35
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 9e-18
d1okca_ 292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 4e-06
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score =  128 bits (321), Expect = 1e-35
 Identities = 68/322 (21%), Positives = 128/322 (39%), Gaps = 40/322 (12%)

Query: 3   VKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALPFHSNSATVFPS 62
           +K F+ GG+A+ ++  +  P++ +K+ +Q+Q  +  +  +                    
Sbjct: 7   LKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAE-------------------- 46

Query: 63  NSIHIPTTAPELPPRVGPISVGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDVLK 122
                           G I   V+I + +G  + + G  A V+R            D  K
Sbjct: 47  ------------KQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYK 94

Query: 123 QKWTD----KDSNRMTLSRKVAAGLISGAVGATVGNPADVAMVRMQADGRLPPAQRRNYK 178
           Q +              +  +A+G  +GA       P D A  R+ AD     A +R + 
Sbjct: 95  QIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVG-KGAAQREFT 153

Query: 179 SVIDAITQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTH 238
            + + IT++ + +G+  L++G +++V   +I  A+    YD  K M+         +   
Sbjct: 154 GLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP--KNVHIIVS 211

Query: 239 VTASFAAGFVASVASNPVDVIKTRVMNMTVEAGRDPPYKGALDCALKTVRAEGPMALYKG 298
              +     VA + S P D ++ R+M  +   G D  Y G +DC  K  + EGP A +KG
Sbjct: 212 WMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKG 271

Query: 299 FIPTISRQGPFTVVLFVTLEQV 320
               + R G     + V  +++
Sbjct: 272 AWSNVLR-GMGGAFVLVLYDEI 292


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query327
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.97
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=1.4e-52  Score=368.07  Aligned_cols=281  Identities=23%  Similarity=0.366  Sum_probs=246.7

Q ss_pred             hhhhHHHhhHHHhHhhhcchhhHHHHHHhhcCcccccccccccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCcChHH
Q 044484            3 VKGFVEGGIASIVAGCSTHPLDLIKVRMQLQGENVAVPQQVHSLRPALPFHSNSATVFPSNSIHIPTTAPELPPRVGPIS   82 (327)
Q Consensus         3 ~~~~~~g~~a~~~~~~~~~Pld~vk~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (327)
                      ++++++|++|++++.+++||||+||+|+|+++.......                                ...+++.++
T Consensus         7 ~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~--------------------------------~~~~~~~~~   54 (292)
T d1okca_           7 LKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISA--------------------------------EKQYKGIID   54 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCG--------------------------------GGSCCSHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCc--------------------------------ccccCCHHH
Confidence            578999999999999999999999999999865321100                                233679999


Q ss_pred             HHHHHHHhhcHhhhhcChhHHHHHHhhhchhhHhhHHHHHHhhcccC----CCccchHHHHHHHHHHHHHHhhhcCcHHH
Q 044484           83 VGVKIFQTEGVAALFSGVSATVLRQTLYSTTRMGLYDVLKQKWTDKD----SNRMTLSRKVAAGLISGAVGATVGNPADV  158 (327)
Q Consensus        83 ~~~~i~~~~G~~gly~G~~~~l~~~~~~~~~~f~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~a~~~~~~~~~Pld~  158 (327)
                      ++++|+++||+++||+|+.+.++...+...++|.+|+.+++.+.+..    .........+++|.+|++++.++++|+|+
T Consensus        55 ~~~~i~~~~G~~~ly~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~  134 (292)
T d1okca_          55 CVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDF  134 (292)
T ss_dssp             HHHHHHHHHCGGGGGTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhhhhhhhhccchhhhhhhcccchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhh
Confidence            99999999999999999999999999999999999999999887642    22344567788999999999999999999


Q ss_pred             HHHHHhcCCCCCCcccCCCccHHHHHHHHHHhhchhhccccchhhhhhHHHHhhHHHHHHHHHHHHHHhcCCCCCChhhH
Q 044484          159 AMVRMQADGRLPPAQRRNYKSVIDAITQMLRQEGVASLWRGSSLTVNRAMIVTASQLATYDQVKEMILKKGVMRDGLGTH  238 (327)
Q Consensus       159 ik~r~q~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~lyrG~~~~l~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~  238 (327)
                      +|+|+|.+..... ....+.+.++++++++++||+++||+|+.+++++++++.+++|..||.+++.+.+..  ..+....
T Consensus       135 ik~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~  211 (292)
T d1okca_         135 ARTRLAADVGKGA-AQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPK--NVHIIVS  211 (292)
T ss_dssp             HHHHHHHCCCSST-TTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGG--CSCHHHH
T ss_pred             hheeeeccccccc-cccccccHHHHHHHhhhccchhhhhccccccccceehHhhhhhhhccchhhhccccc--ccchHHH
Confidence            9999999875322 345678999999999999999999999999999999999999999999998765433  4667889


Q ss_pred             HHHHHHHHHhhhhccchhHHHHHHHhhccccCCCCCCCCCHHHHHHHHHHhhCccccccchhHHHhhhccchhHHHHHHH
Q 044484          239 VTASFAAGFVASVASNPVDVIKTRVMNMTVEAGRDPPYKGALDCALKTVRAEGPMALYKGFIPTISRQGPFTVVLFVTLE  318 (327)
Q Consensus       239 ~~~g~~ag~~~~~~~~Pld~i~~r~q~~~~~~~~~~~~~~~~~~~~~i~~~eG~~~ly~G~~~~~~~~~~~~~i~~~~ye  318 (327)
                      +++++++++++++++||+||||+|+|.+.........|.++++|+++|+++||++|||||+.+++++.++ ++++|.+||
T Consensus       212 ~~~~~~~~~~a~~~t~P~dvvktR~q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~-~~i~~~~ye  290 (292)
T d1okca_         212 WMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYD  290 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHH-HHHHHHHHH
T ss_pred             HHHHHHHHHHHhhccccHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHHHH-HHhhhhHhh
Confidence            9999999999999999999999999998876555668999999999999999999999999999999755 789999999


Q ss_pred             H
Q 044484          319 Q  319 (327)
Q Consensus       319 ~  319 (327)
                      .
T Consensus       291 ~  291 (292)
T d1okca_         291 E  291 (292)
T ss_dssp             T
T ss_pred             c
Confidence            5



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure