Citrus Sinensis ID: 044543
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 962 | 2.2.26 [Sep-21-2011] | |||||||
| Q42556 | 954 | ATPase 9, plasma membrane | yes | no | 0.988 | 0.996 | 0.859 | 0.0 | |
| Q03194 | 952 | Plasma membrane ATPase 4 | N/A | no | 0.987 | 0.997 | 0.849 | 0.0 | |
| Q7XPY2 | 951 | Plasma membrane ATPase OS | yes | no | 0.983 | 0.994 | 0.858 | 0.0 | |
| Q9M2A0 | 948 | ATPase 8, plasma membrane | no | no | 0.980 | 0.994 | 0.844 | 0.0 | |
| Q9SH76 | 949 | ATPase 6, plasma membrane | no | no | 0.982 | 0.995 | 0.840 | 0.0 | |
| P19456 | 948 | ATPase 2, plasma membrane | no | no | 0.983 | 0.997 | 0.845 | 0.0 | |
| P20649 | 949 | ATPase 1, plasma membrane | no | no | 0.983 | 0.996 | 0.838 | 0.0 | |
| P83970 | 951 | Plasma membrane ATPase OS | N/A | no | 0.983 | 0.994 | 0.833 | 0.0 | |
| Q9SJB3 | 949 | ATPase 5, plasma membrane | no | no | 0.983 | 0.996 | 0.819 | 0.0 | |
| P20431 | 949 | ATPase 3, plasma membrane | no | no | 0.982 | 0.995 | 0.822 | 0.0 |
| >sp|Q42556|PMA9_ARATH ATPase 9, plasma membrane-type OS=Arabidopsis thaliana GN=AHA9 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 1665 bits (4313), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 817/951 (85%), Positives = 892/951 (93%)
Query: 12 NNGISLEEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKKESKV 71
N S ++IK E +DLE+IPI EV QL+CTREGL+++EGQ RL IFGPNKLEEKKE+KV
Sbjct: 4 NKDSSWDDIKNEGIDLEKIPIEEVLTQLRCTREGLTSDEGQTRLEIFGPNKLEEKKENKV 63
Query: 72 LKFLGFMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAG 131
LKFLGFMWNPLSWVME+AAIMAIALANGGG+PPDWQDFVGI VLL+INSTISFIEENNAG
Sbjct: 64 LKFLGFMWNPLSWVMELAAIMAIALANGGGRPPDWQDFVGITVLLIINSTISFIEENNAG 123
Query: 132 NAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQ 191
NAAAALMAGLAP+TKVLRDG W EQEA+ILVPGD+ISIKLGDI+PAD RLLDGDPLKIDQ
Sbjct: 124 NAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIISIKLGDIVPADGRLLDGDPLKIDQ 183
Query: 192 SALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQK 251
SALTGESLPVTK PG EV+SGSTCKQGE+EAVVIATGVHTFFGKAAHLVDSTNQEGHFQK
Sbjct: 184 SALTGESLPVTKHPGQEVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNQEGHFQK 243
Query: 252 VLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMA 311
VLTAIGNFCICSIAIGM+IEI+VMYPIQ RAYR+GIDNLLVLLIGGIPIAMPTVLSVTMA
Sbjct: 244 VLTAIGNFCICSIAIGMLIEIVVMYPIQKRAYRDGIDNLLVLLIGGIPIAMPTVLSVTMA 303
Query: 312 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTV 371
IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK++VEVFVKD+DKD +
Sbjct: 304 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSMVEVFVKDLDKDQL 363
Query: 372 ILYGARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSW 431
++ ARASRVENQDAIDACIVGMLGD +EAR GITE+HF PFNPV+KRTAITYID++G+W
Sbjct: 364 LVNAARASRVENQDAIDACIVGMLGDPREAREGITEVHFFPFNPVDKRTAITYIDANGNW 423
Query: 432 HRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQ 491
HR+SKGAPEQIIELCNLRED +AH IIDKFADRGLRSLAV Q+V EK K SPG PWQ
Sbjct: 424 HRVSKGAPEQIIELCNLREDASKRAHDIIDKFADRGLRSLAVGRQTVSEKDKNSPGEPWQ 483
Query: 492 FVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALL 551
F+GLLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAI KETGRRLGMGTNMYPSSALL
Sbjct: 484 FLGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALL 543
Query: 552 GQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKK 611
GQ KD +I++LPVDELIEKADGFAGVFPEHKYEIV++LQE KHICGMTGDGVNDAPALK+
Sbjct: 544 GQDKDESIASLPVDELIEKADGFAGVFPEHKYEIVKRLQEMKHICGMTGDGVNDAPALKR 603
Query: 612 ADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVL 671
ADIGIAVADATDAAR ASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIV+
Sbjct: 604 ADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVM 663
Query: 672 GFLLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGT 731
GF+L+ALIWKFDFSPFMVLI+AILNDGTIMTISKDRVKPSP+PD+WKLKEIFATG+VLGT
Sbjct: 664 GFMLLALIWKFDFSPFMVLIVAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGT 723
Query: 732 YLAVMTVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWS 791
YLAVMTV+FFWA S+ FFS KFGVRSI +PHELTAAVYLQVSIVSQALIFVTRSRSWS
Sbjct: 724 YLAVMTVVFFWAAESTDFFSAKFGVRSISGNPHELTAAVYLQVSIVSQALIFVTRSRSWS 783
Query: 792 FLERPGLLLIAAFIIAQLVATLIAVYANFGFARIHGIGWGWVGVIWLYSIVFYIPLDVLK 851
++ERPG LI+AF +AQL+ATLIAVYAN+ FARI GIGWGW GVIWLYSIVFYIPLD+LK
Sbjct: 784 YVERPGFWLISAFFMAQLIATLIAVYANWNFARIRGIGWGWAGVIWLYSIVFYIPLDILK 843
Query: 852 FIVRYALTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQRTLHGLHPPETSELLNDKN 911
FI+RY+L+G+AWDN++ENKTAFT+KKDYG+GEREAQWA AQRTLHGL P +TS++ NDK+
Sbjct: 844 FIIRYSLSGRAWDNVIENKTAFTSKKDYGKGEREAQWAQAQRTLHGLQPAQTSDMFNDKS 903
Query: 912 NYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 962
YRELSEIA+QAKRRAEVARLRE HTLKGHVESVVK KGLDIE IQQHYT+
Sbjct: 904 TYRELSEIADQAKRRAEVARLRERHTLKGHVESVVKQKGLDIEAIQQHYTL 954
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 6 |
| >sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4 OS=Nicotiana plumbaginifolia GN=PMA4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1654 bits (4284), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 807/950 (84%), Positives = 891/950 (93%)
Query: 13 NGISLEEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKKESKVL 72
ISLEEIK E VDLE+IPI EVFEQLKCTREGLS +EG RL IFGPNKLEEK ESK+L
Sbjct: 3 KAISLEEIKNETVDLEKIPIEEVFEQLKCTREGLSADEGASRLQIFGPNKLEEKNESKIL 62
Query: 73 KFLGFMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGN 132
KFLGFMWNPLSWVME AA+MAIALANG GKPPDWQDF+GI+ LL+INSTISFIEENNAGN
Sbjct: 63 KFLGFMWNPLSWVMEAAAVMAIALANGDGKPPDWQDFIGIICLLVINSTISFIEENNAGN 122
Query: 133 AAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQS 192
AAAALMAGLAP+TKVLRDG W EQEA+ILVPGD+IS+KLGDIIPADARLL+GDPLKIDQS
Sbjct: 123 AAAALMAGLAPKTKVLRDGRWSEQEAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQS 182
Query: 193 ALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKV 252
ALTGESLPVTK PGDEVFSGSTCKQGE+EAVVIATGVHTFFGKAAHLVDSTN GHFQKV
Sbjct: 183 ALTGESLPVTKNPGDEVFSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKV 242
Query: 253 LTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAI 312
LTAIGNFCICSIAIGM++EIIVMYPIQHR YR+GIDNLLVLLIGGIPIAMPTVLSVTMAI
Sbjct: 243 LTAIGNFCICSIAIGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 302
Query: 313 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVI 372
GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NLVEVF K +DK+ V+
Sbjct: 303 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLVEVFAKGVDKEYVL 362
Query: 373 LYGARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWH 432
L ARASRVENQDAIDAC+VGML D KEARAGI E+HFLPFNPV+KRTA+TYID++ +WH
Sbjct: 363 LLAARASRVENQDAIDACMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDNNNNWH 422
Query: 433 RISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQF 492
R SKGAPEQI++LCN +EDVR K H+++DK+A+RGLRSLAVA ++VPEK+KESPGG W+F
Sbjct: 423 RASKGAPEQILDLCNAKEDVRRKVHSMMDKYAERGLRSLAVARRTVPEKSKESPGGRWEF 482
Query: 493 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLG 552
VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS++LLG
Sbjct: 483 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLG 542
Query: 553 QIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKA 612
Q KD+ I++LP++ELIEKADGFAGVFPEHKYEIV+KLQERKHI GMTGDGVNDAPALKKA
Sbjct: 543 QDKDSAIASLPIEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKA 602
Query: 613 DIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLG 672
DIGIAVADATDAARGASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV G
Sbjct: 603 DIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFG 662
Query: 673 FLLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGTY 732
F+ IALIWK+DFS FMVLIIAILNDGTIMTISKDRVKPSP+PD+WKLKEIFATG+VLG Y
Sbjct: 663 FMFIALIWKYDFSAFMVLIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFATGVVLGGY 722
Query: 733 LAVMTVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWSF 792
A+MTV+FFWA+H + FFS+KFGV+S+R+S E+ +A+YLQVSI+SQALIFVTRSRSWSF
Sbjct: 723 QALMTVVFFWAMHDTDFFSDKFGVKSLRNSDEEMMSALYLQVSIISQALIFVTRSRSWSF 782
Query: 793 LERPGLLLIAAFIIAQLVATLIAVYANFGFARIHGIGWGWVGVIWLYSIVFYIPLDVLKF 852
LERPG+LL+ AF+IAQLVATLIAVYAN+ FAR+ G GWGW GVIWLYSI+FY+PLD++KF
Sbjct: 783 LERPGMLLVIAFMIAQLVATLIAVYANWAFARVKGCGWGWAGVIWLYSIIFYLPLDIMKF 842
Query: 853 IVRYALTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQRTLHGLHPPETSELLNDKNN 912
+RY L+GKAW+NLL+NKTAFTTKKDYG+ EREAQWALAQRTLHGL PPE + L N+KN+
Sbjct: 843 AIRYILSGKAWNNLLDNKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPEATNLFNEKNS 902
Query: 913 YRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 962
YRELSEIAEQAKRRAE+ARLRELHTLKGHVESVVKLKGLDIETIQQHYTV
Sbjct: 903 YRELSEIAEQAKRRAEMARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 952
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Nicotiana plumbaginifolia (taxid: 4092) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q7XPY2|PMA1_ORYSJ Plasma membrane ATPase OS=Oryza sativa subsp. japonica GN=Os04g0656100 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1654 bits (4283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 814/948 (85%), Positives = 891/948 (93%), Gaps = 2/948 (0%)
Query: 17 LEEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKKESKVLKFLG 76
LEEIK E VDLE IPI EVFEQLKCTREGLS+EEG +R+ +FGPNKLEEKKESK+LKFLG
Sbjct: 4 LEEIKNEAVDLENIPIEEVFEQLKCTREGLSSEEGNRRIEMFGPNKLEEKKESKILKFLG 63
Query: 77 FMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAA 136
FMWNPLSWVME+AAIMAIALANGGGKPPDW+DFVGI+VLL+INSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEMAAIMAIALANGGGKPPDWEDFVGIIVLLVINSTISFIEENNAGNAAAA 123
Query: 137 LMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTG 196
LMA LAP+TKVLRDG W EQEA+ILVPGD+ISIKLGDI+PADARLL+GDPLKIDQSALTG
Sbjct: 124 LMANLAPKTKVLRDGRWGEQEAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQSALTG 183
Query: 197 ESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTAI 256
ESLPVTK PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHFQ VLTAI
Sbjct: 184 ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQTVLTAI 243
Query: 257 GNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 316
GNFCICSIA+G+VIEIIVM+PIQHRAYR+GI+NLLVLLIGGIPIAMPTVLSVTMAIGSH+
Sbjct: 244 GNFCICSIAVGIVIEIIVMFPIQHRAYRSGIENLLVLLIGGIPIAMPTVLSVTMAIGSHK 303
Query: 317 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGA 376
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLVEVF K +DKD V+L A
Sbjct: 304 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFTKGVDKDHVLLLAA 363
Query: 377 RASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISK 436
RASR ENQDAIDA +VGML D KEARAGI E+HFLPFNPV+KRTA+TYID+DG+WHR SK
Sbjct: 364 RASRTENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDADGNWHRASK 423
Query: 437 GAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLL 496
GAPEQI+ LCN +EDV+ K H +IDK+A+RGLRSLAVA Q VPEK+KES GGPWQFVGLL
Sbjct: 424 GAPEQILTLCNCKEDVKRKVHAVIDKYAERGLRSLAVARQEVPEKSKESAGGPWQFVGLL 483
Query: 497 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKD 556
PLFDPPRHDSAETIR+AL+LGVNVKMITGDQLAI KETGRRLGMGTNMYPSSALLGQ KD
Sbjct: 484 PLFDPPRHDSAETIRKALHLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKD 543
Query: 557 ANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGI 616
A++ ALPVDELIEKADGFAGVFPEHKYEIV++LQE+KHI GMTGDGVNDAPALKKADIGI
Sbjct: 544 ASLEALPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIGI 603
Query: 617 AVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLI 676
AVADATDAAR ASDIVLTEPGLSVI+SAVLTSR IFQRMKNYTIYAVSITIRIVLGFLLI
Sbjct: 604 AVADATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVSITIRIVLGFLLI 663
Query: 677 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGTYLAVM 736
ALIWK+DFSPFMVLIIAILNDGTIMTISKDRVKPSP+PD+WKLKEIFATGIVLG+YLA+M
Sbjct: 664 ALIWKYDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGIVLGSYLALM 723
Query: 737 TVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLERP 796
TV+FFWA+H + FF++KFGVRSIR+S HE+ +A+YLQVSIVSQALIFVTRSRSWSF+ERP
Sbjct: 724 TVIFFWAMHKTDFFTDKFGVRSIRNSEHEMMSALYLQVSIVSQALIFVTRSRSWSFIERP 783
Query: 797 GLLLIAAFIIAQLVATLIAVYANFGFARIHGIGWGWVGVIWLYSIVFYIPLDVLKFIVRY 856
GLLL+ AF++AQLVAT +AVYAN+GFARI GIGWGW GVIWLYSIVFY PLD+ KF +R+
Sbjct: 784 GLLLVTAFMLAQLVATFLAVYANWGFARIKGIGWGWAGVIWLYSIVFYFPLDIFKFFIRF 843
Query: 857 ALTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQRTLHGLHPPE--TSELLNDKNNYR 914
L+G+AWDNLLENK AFTTKKDYGR EREAQWA AQRTLHGL PPE ++ L NDK++YR
Sbjct: 844 VLSGRAWDNLLENKIAFTTKKDYGREEREAQWATAQRTLHGLQPPEVASNTLFNDKSSYR 903
Query: 915 ELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 962
ELSEIAEQAKRRAE+ARLREL+TLKGHVESVVKLKGLDI+TIQQ+YTV
Sbjct: 904 ELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTIQQNYTV 951
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9M2A0|PMA8_ARATH ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=AHA8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1634 bits (4230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 800/947 (84%), Positives = 872/947 (92%), Gaps = 4/947 (0%)
Query: 16 SLEEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKKESKVLKFL 75
S +EIKKENVDLERIP+ EVFEQLKC++EGLS++EG KRL IFG NKLEEK E+K LKFL
Sbjct: 6 SWDEIKKENVDLERIPVEEVFEQLKCSKEGLSSDEGAKRLEIFGANKLEEKSENKFLKFL 65
Query: 76 GFMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAA 135
GFMWNPLSWVME AAIMAI LANGGGK PDWQDF+GI+VLL+INSTISFIEENNAGNAAA
Sbjct: 66 GFMWNPLSWVMESAAIMAIVLANGGGKAPDWQDFIGIMVLLIINSTISFIEENNAGNAAA 125
Query: 136 ALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALT 195
ALMA LAP+TKVLRDG W EQEASILVPGD+ISIKLGDI+PADARLL+GDPLKIDQSALT
Sbjct: 126 ALMANLAPKTKVLRDGKWGEQEASILVPGDLISIKLGDIVPADARLLEGDPLKIDQSALT 185
Query: 196 GESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTA 255
GESLP TK PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN GHFQKVLT+
Sbjct: 186 GESLPTTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTS 245
Query: 256 IGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 315
IGNFCICSI +GM+IEI++MYPIQHR YR+GIDNLLVLLIGGIPIAMPTVLSVTMAIGSH
Sbjct: 246 IGNFCICSIGLGMLIEILIMYPIQHRTYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 305
Query: 316 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYG 375
RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK+L+EVF K+MD D+V+L
Sbjct: 306 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFPKNMDSDSVVLMA 365
Query: 376 ARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRIS 435
ARASR+ENQDAIDA IVGMLGD KEARAGITE+HFLPFNPV+KRTAITYID G WHR S
Sbjct: 366 ARASRIENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITYIDESGDWHRSS 425
Query: 436 KGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGL 495
KGAPEQIIELCNL+ + + KAH +ID FA+RGLRSL VA+Q+VPEKTKES G PW+FVGL
Sbjct: 426 KGAPEQIIELCNLQGETKRKAHEVIDGFAERGLRSLGVAQQTVPEKTKESDGSPWEFVGL 485
Query: 496 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIK 555
LPLFDPPRHDSAETIRRAL LGVNVKMITGDQLAI ETGRRLGMGTNMYPS++LLG K
Sbjct: 486 LPLFDPPRHDSAETIRRALELGVNVKMITGDQLAIGIETGRRLGMGTNMYPSTSLLGNSK 545
Query: 556 DANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG 615
D ++ +P+DELIEKADGFAGVFPEHKYEIV+KLQERKHICGMTGDGVNDAPALKKADIG
Sbjct: 546 DESLVGIPIDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG 605
Query: 616 IAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLL 675
IAVADATDAAR ASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIVLGF+L
Sbjct: 606 IAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 665
Query: 676 IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGTYLAV 735
+ALIW+FDF+PFMVLIIAILNDGTIMTISKDRVKPSPVPD+WKL EIFATG+VLGTY+A+
Sbjct: 666 VALIWRFDFAPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLNEIFATGVVLGTYMAL 725
Query: 736 MTVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLER 795
TVLFFW H + FFS+ FGVRSI+ + EL AA+YLQVSI+SQALIFVTRSRSWSF+ER
Sbjct: 726 TTVLFFWLAHDTDFFSKTFGVRSIQGNEEELMAALYLQVSIISQALIFVTRSRSWSFVER 785
Query: 796 PGLLLIAAFIIAQLVATLIAVYANFGFARIHGIGWGWVGVIWLYSIVFYIPLDVLKFIVR 855
PG LL+ AF+IAQLVATLIAVYAN+GFARI G GWGW G IW+YSI+ YIPLD+LKFI+R
Sbjct: 786 PGFLLLIAFVIAQLVATLIAVYANWGFARIVGCGWGWAGGIWVYSIITYIPLDILKFIIR 845
Query: 856 YALTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQRTLHGLHPPETSELLNDKNNYRE 915
YALTGKAWDN++ KTAFTTKKDYG+GEREAQWALAQRTLHGL PPE + ND N E
Sbjct: 846 YALTGKAWDNMINQKTAFTTKKDYGKGEREAQWALAQRTLHGLPPPEA--MFNDNKN--E 901
Query: 916 LSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 962
LSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDI+TIQQHYTV
Sbjct: 902 LSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 948
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9SH76|PMA6_ARATH ATPase 6, plasma membrane-type OS=Arabidopsis thaliana GN=AHA6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1621 bits (4198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 797/948 (84%), Positives = 867/948 (91%), Gaps = 3/948 (0%)
Query: 15 ISLEEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKKESKVLKF 74
IS +EIKKENVDLE+IP++EVF+QLKC+REGLS+EEG+ RL IFG NKLEEK E+K LKF
Sbjct: 5 ISWDEIKKENVDLEKIPVDEVFQQLKCSREGLSSEEGRNRLQIFGANKLEEKVENKFLKF 64
Query: 75 LGFMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAA 134
LGFMWNPLSWVME AAIMAI LANGGG+PPDWQDFVGI LL+INSTISFIEENNAGNAA
Sbjct: 65 LGFMWNPLSWVMEAAAIMAIVLANGGGRPPDWQDFVGITCLLIINSTISFIEENNAGNAA 124
Query: 135 AALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSAL 194
AALMA LAP+TKVLRDG W EQEA+ILVPGD+ISIKLGDI+PADARLL+GDPLKIDQSAL
Sbjct: 125 AALMANLAPKTKVLRDGRWGEQEAAILVPGDLISIKLGDIVPADARLLEGDPLKIDQSAL 184
Query: 195 TGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLT 254
TGESLP TK GDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN GHFQKVLT
Sbjct: 185 TGESLPATKHQGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLT 244
Query: 255 AIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 314
AIGNFCICSI IGM+IEII+MYPIQHR YR+GIDNLLVLLIGGIPIAMPTVLSVTMAIGS
Sbjct: 245 AIGNFCICSIGIGMLIEIIIMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 304
Query: 315 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILY 374
HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNL+EVF KD+DKD VIL
Sbjct: 305 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFSKDVDKDYVILL 364
Query: 375 GARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRI 434
ARASRVENQDAID IV MLGD KEARAGITE+HFLPFNPVEKRTAITYID++G WHR
Sbjct: 365 SARASRVENQDAIDTSIVNMLGDPKEARAGITEVHFLPFNPVEKRTAITYIDTNGEWHRC 424
Query: 435 SKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVG 494
SKGAPEQIIELC+L+ + + +AH IIDKFA+RGLRSL VA Q VPEK KES G PW+FVG
Sbjct: 425 SKGAPEQIIELCDLKGETKRRAHEIIDKFAERGLRSLGVARQRVPEKDKESAGTPWEFVG 484
Query: 495 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQI 554
LLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAI KETGRRLGMGTNMYPSS+LL +
Sbjct: 485 LLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL-EN 543
Query: 555 KDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADI 614
KD +PVDELIEKADGFAGVFPEHKYEIVRKLQERKHI GMTGDGVNDAPALKKADI
Sbjct: 544 KDDTTGGVPVDELIEKADGFAGVFPEHKYEIVRKLQERKHIVGMTGDGVNDAPALKKADI 603
Query: 615 GIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFL 674
GIAV DATDAAR ASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGF+
Sbjct: 604 GIAVDDATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 663
Query: 675 LIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGTYLA 734
L+ALIW+FDFSPFMVLIIAILNDGTIMTISKDRVKPSP+PD+WKLKEIFATG+VLGTY+A
Sbjct: 664 LVALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPIPDSWKLKEIFATGVVLGTYMA 723
Query: 735 VMTVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLE 794
++TV+FFW H +TFFS+KFGVRS++ EL A +YLQVSI+SQALIFVTRSRSWSF+E
Sbjct: 724 LVTVVFFWLAHDTTFFSDKFGVRSLQGKDEELIAVLYLQVSIISQALIFVTRSRSWSFVE 783
Query: 795 RPGLLLIAAFIIAQLVATLIAVYANFGFARIHGIGWGWVGVIWLYSIVFYIPLDVLKFIV 854
RPGLLL+ AF +AQL+ATLIA YA++ FARI G GWGW GVIW+YSIV YIPLD+LKFI
Sbjct: 784 RPGLLLLIAFFVAQLIATLIATYAHWEFARIKGCGWGWCGVIWIYSIVTYIPLDILKFIT 843
Query: 855 RYALTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQRTLHGLHPPETSELLNDKNNYR 914
RY L+GKAW+N++EN+TAFTTKKDYGRGEREAQWALAQRTLHGL PPE+ + D Y
Sbjct: 844 RYTLSGKAWNNMIENRTAFTTKKDYGRGEREAQWALAQRTLHGLKPPES--MFEDTATYT 901
Query: 915 ELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 962
ELSEIAEQAK+RAEVARLRE+HTLKGHVESVVKLKGLDI+ + QHYTV
Sbjct: 902 ELSEIAEQAKKRAEVARLREVHTLKGHVESVVKLKGLDIDNLNQHYTV 949
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P19456|PMA2_ARATH ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=AHA2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1610 bits (4168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 801/947 (84%), Positives = 868/947 (91%), Gaps = 1/947 (0%)
Query: 16 SLEEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKKESKVLKFL 75
SLE+IK E VDLE+IPI EVF+QLKC+REGL+ +EG+ R+ IFGPNKLEEKKESK+LKFL
Sbjct: 3 SLEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFL 62
Query: 76 GFMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAA 135
GFMWNPLSWVME+AAIMAIALANG G+PPDWQDFVGI+ LL+INSTISFIEENNAGNAAA
Sbjct: 63 GFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAA 122
Query: 136 ALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALT 195
ALMAGLAP+TKVLRDG W EQEA+ILVPGD++SIKLGDIIPADARLL+GDPLK+DQSALT
Sbjct: 123 ALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALT 182
Query: 196 GESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTA 255
GESLPVTK PG EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHFQKVLTA
Sbjct: 183 GESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 242
Query: 256 IGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 315
IGNFCICSIAIGMVIEIIVMYPIQ R YR+GIDNLLVLLIGGIPIAMPTVLSVTMAIGSH
Sbjct: 243 IGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 302
Query: 316 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYG 375
RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLVEVF K ++KD V+L+
Sbjct: 303 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFA 362
Query: 376 ARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRIS 435
A ASRVENQDAIDA +VGML D KEARAGI E+HFLPFNPV+KRTA+TYID G+WHR+S
Sbjct: 363 AMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVS 422
Query: 436 KGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGL 495
KGAPEQI+EL D+ K +IIDK+A+RGLRSLAVA Q VPEKTKESPG PW+FVGL
Sbjct: 423 KGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGL 482
Query: 496 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIK 555
LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSALLG K
Sbjct: 483 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHK 542
Query: 556 DANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG 615
DAN++++PV+ELIEKADGFAGVFPEHKYEIV+KLQERKHI GMTGDGVNDAPALKKADIG
Sbjct: 543 DANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIG 602
Query: 616 IAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLL 675
IAVADATDAARGASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV GF+L
Sbjct: 603 IAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFML 662
Query: 676 IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGTYLAV 735
IALIW+FDFS FMVLIIAILNDGTIMTISKDRVKPSP PD+WKLKEIFATG+VLG Y A+
Sbjct: 663 IALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYQAI 722
Query: 736 MTVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLER 795
MTV+FFWA H + FFS+ FGVRSIRD+ HEL AVYLQVSI+SQALIFVTRSRSWSF+ER
Sbjct: 723 MTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTRSRSWSFVER 782
Query: 796 PGLLLIAAFIIAQLVATLIAVYANFGFARIHGIGWGWVGVIWLYSIVFYIPLDVLKFIVR 855
PG LL+ AF+IAQL+ATLIAVYAN+ FA+I GIGWGW GVIWLYSIV Y PLDV KF +R
Sbjct: 783 PGALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIR 842
Query: 856 YALTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQRTLHGLHPPETSELLNDKNNYRE 915
Y L+GKAW NL ENKTAFT KKDYG+ EREAQWALAQRTLHGL P E + +K +YRE
Sbjct: 843 YILSGKAWLNLFENKTAFTMKKDYGKEEREAQWALAQRTLHGLQPKEAVNIFPEKGSYRE 902
Query: 916 LSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 962
LSEIAEQAKRRAE+ARLRELHTLKGHVESVVKLKGLDIET HYTV
Sbjct: 903 LSEIAEQAKRRAEIARLRELHTLKGHVESVVKLKGLDIET-PSHYTV 948
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P20649|PMA1_ARATH ATPase 1, plasma membrane-type OS=Arabidopsis thaliana GN=AHA1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 1606 bits (4158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 793/946 (83%), Positives = 870/946 (91%)
Query: 17 LEEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKKESKVLKFLG 76
LE+IK E VDLE+IPI EVF+QLKCTREGL+ +EG+ R+VIFGPNKLEEKKESK+LKFLG
Sbjct: 4 LEDIKNETVDLEKIPIEEVFQQLKCTREGLTTQEGEDRIVIFGPNKLEEKKESKILKFLG 63
Query: 77 FMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAA 136
FMWNPLSWVME AA+MAIALANG +PPDWQDFVGI+ LL+INSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEAAALMAIALANGDNRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAA 123
Query: 137 LMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTG 196
LMAGLAP+TKVLRDG W EQEA+ILVPGD++SIKLGDIIPADARLL+GDPLK+DQSALTG
Sbjct: 124 LMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTG 183
Query: 197 ESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTAI 256
ESLPVTK PG EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHFQKVLT+I
Sbjct: 184 ESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTSI 243
Query: 257 GNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 316
GNFCICSIAIG+ IEI+VMYPIQHR YR+GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 244 GNFCICSIAIGIAIEIVVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 303
Query: 317 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGA 376
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLVEVF K ++KD V+L+ A
Sbjct: 304 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAA 363
Query: 377 RASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISK 436
ASRVENQDAIDA +VGML D KEARAGI E+HFLPFNPV+KRTA+TYIDSDG+WHR+SK
Sbjct: 364 MASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRVSK 423
Query: 437 GAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLL 496
GAPEQI++L N R D+R K + IDK+A+RGLRSLAVA Q VPEKTKESPGGPW+FVGLL
Sbjct: 424 GAPEQILDLANARPDLRKKVLSCIDKYAERGLRSLAVARQVVPEKTKESPGGPWEFVGLL 483
Query: 497 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKD 556
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPS+ALLG KD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSAALLGTDKD 543
Query: 557 ANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGI 616
+NI+++PV+ELIEKADGFAGVFPEHKYEIV+KLQERKHI GMTGDGVNDAPALKKADIGI
Sbjct: 544 SNIASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGI 603
Query: 617 AVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLI 676
AVADATDAARGASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV GF+LI
Sbjct: 604 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLI 663
Query: 677 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGTYLAVM 736
ALIW+FDFS FMVLIIAILNDGTIMTISKDRVKPSP PD+WKLKEIFATGIVLG Y A+M
Sbjct: 664 ALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGIVLGGYQAIM 723
Query: 737 TVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLERP 796
+V+FFWA H + FFS+KFGVRSIRD+ EL AVYLQVSI+SQALIFVTRSRSWSF+ERP
Sbjct: 724 SVIFFWAAHKTDFFSDKFGVRSIRDNNDELMGAVYLQVSIISQALIFVTRSRSWSFVERP 783
Query: 797 GLLLIAAFIIAQLVATLIAVYANFGFARIHGIGWGWVGVIWLYSIVFYIPLDVLKFIVRY 856
G LL+ AF+IAQLVATLIAVYA++ FA++ GIGWGW GVIW+YSIV Y P D+LKF +RY
Sbjct: 784 GALLMIAFVIAQLVATLIAVYADWTFAKVKGIGWGWAGVIWIYSIVTYFPQDILKFAIRY 843
Query: 857 ALTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQRTLHGLHPPETSELLNDKNNYREL 916
L+GKAW +L +N+TAFTTKKDYG GEREAQWA AQRTLHGL P E + +K +YREL
Sbjct: 844 ILSGKAWASLFDNRTAFTTKKDYGIGEREAQWAQAQRTLHGLQPKEDVNIFPEKGSYREL 903
Query: 917 SEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 962
SEIAEQAKRRAE+ARLRELHTLKGHVESV KLKGLDI+T HYTV
Sbjct: 904 SEIAEQAKRRAEIARLRELHTLKGHVESVAKLKGLDIDTAGHHYTV 949
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P83970|PMA1_WHEAT Plasma membrane ATPase OS=Triticum aestivum GN=ha1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1603 bits (4150), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 790/948 (83%), Positives = 878/948 (92%), Gaps = 2/948 (0%)
Query: 17 LEEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKKESKVLKFLG 76
LEEI+ E VDLE IPI EVFEQLKCTR+GL+++EG +R+ IFG NKLEEKKESKVLKFLG
Sbjct: 4 LEEIRNEAVDLENIPIEEVFEQLKCTRQGLTSDEGAQRVEIFGLNKLEEKKESKVLKFLG 63
Query: 77 FMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAA 136
FMWNPLSWVME+AAIMAIALANGGGKPPDWQDFVGI+VLL+INSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEMAAIMAIALANGGGKPPDWQDFVGIIVLLVINSTISFIEENNAGNAAAA 123
Query: 137 LMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTG 196
LMA LAP+TKVLRDG W EQEASILVPGD++SIKLGDI+PADARLL+GDPLKIDQS LTG
Sbjct: 124 LMANLAPKTKVLRDGRWGEQEASILVPGDIVSIKLGDIVPADARLLEGDPLKIDQSGLTG 183
Query: 197 ESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTAI 256
ESLPVTK PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHFQ+VLTAI
Sbjct: 184 ESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQQVLTAI 243
Query: 257 GNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 316
GNFCI SIA+G+VIEIIVM+PIQ R YR GI+NLLVLLIGGIPIAMPTVLSVTMAIGSH+
Sbjct: 244 GNFCIVSIAVGIVIEIIVMFPIQRRKYRAGIENLLVLLIGGIPIAMPTVLSVTMAIGSHK 303
Query: 317 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGA 376
LSQQGAITKRMTAIEE+AGMDVLCSDKTGTLTLNKL+VDKNLVEVF K +DK+ V+L A
Sbjct: 304 LSQQGAITKRMTAIEELAGMDVLCSDKTGTLTLNKLSVDKNLVEVFAKGVDKEHVLLLAA 363
Query: 377 RASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISK 436
RASRVENQDAIDAC+VGML D KEARAGI E+HFLPFNP +KRTA+TYID++G+WHR SK
Sbjct: 364 RASRVENQDAIDACMVGMLADPKEARAGIREVHFLPFNPTDKRTALTYIDAEGNWHRASK 423
Query: 437 GAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLL 496
GAPEQII LCN +EDV+ K H++I+K+A+RGLRSLAVA Q VPEK+K+SPGGPWQF+GLL
Sbjct: 424 GAPEQIITLCNCKEDVKRKVHSVIEKYAERGLRSLAVARQEVPEKSKDSPGGPWQFIGLL 483
Query: 497 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKD 556
PLFDPPRHDSAETIR+AL LGVNVKMITGDQLAI KETGRRLGMGTNMYPSSALLGQ KD
Sbjct: 484 PLFDPPRHDSAETIRKALVLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQSKD 543
Query: 557 ANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGI 616
++ +LPVDELIEKADGFAGVFPEHKYEIV++LQE+KHI GMTGDGVNDAPALKKADIGI
Sbjct: 544 GSLESLPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIGI 603
Query: 617 AVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLI 676
AV DATDAAR ASDIVLTEPGLSVI+SAVLTSR IFQRMKNYTIYAVSITIRIVLGF+LI
Sbjct: 604 AVDDATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVSITIRIVLGFMLI 663
Query: 677 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGTYLAVM 736
ALIWKFDF+PFMVLIIAILNDGTIMTISKDRVKPSP+PD+WKL EIFATG+VLGTYLA++
Sbjct: 664 ALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLNEIFATGVVLGTYLALV 723
Query: 737 TVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLERP 796
TV+FFW IH + FF+ KFGV SIR++ + +A+YLQVSIVSQALIFVTRSRSWSF+ERP
Sbjct: 724 TVVFFWLIHKTDFFTNKFGVESIRNTEFKEMSALYLQVSIVSQALIFVTRSRSWSFVERP 783
Query: 797 GLLLIAAFIIAQLVATLIAVYANFGFARIHGIGWGWVGVIWLYSIVFYIPLDVLKFIVRY 856
G LL+ AF++AQLVATLIAVYAN+ FARI GIGWGW GVIWL+SIVFY PLD+ KF +R+
Sbjct: 784 GFLLVTAFLLAQLVATLIAVYANWDFARIKGIGWGWAGVIWLFSIVFYFPLDIFKFFIRF 843
Query: 857 ALTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQRTLHGLHPPE--TSELLNDKNNYR 914
L+G+AWDNLL+NKTAFTTK++YG+GEREAQWA AQRTLHGL PE + L NDK++YR
Sbjct: 844 VLSGRAWDNLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYR 903
Query: 915 ELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 962
ELSEIAEQAKRRAE+ARLREL+TLKGHVESVVKLKGLDI+TI Q+YTV
Sbjct: 904 ELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 951
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Triticum aestivum (taxid: 4565) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9SJB3|PMA5_ARATH ATPase 5, plasma membrane-type OS=Arabidopsis thaliana GN=AHA5 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 1595 bits (4131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 775/946 (81%), Positives = 856/946 (90%)
Query: 17 LEEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKKESKVLKFLG 76
L+ IK E+VDL RIP+ EVFE+LKCT++GL+ E RL +FGPNKLEEKKESK+LKFLG
Sbjct: 4 LDHIKNESVDLVRIPMEEVFEELKCTKQGLTANEASHRLDVFGPNKLEEKKESKLLKFLG 63
Query: 77 FMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAA 136
FMWNPLSWVME+AA+MAIALANGGG+PPDWQDFVGIV LLLINSTISFIEENNAGNAAAA
Sbjct: 64 FMWNPLSWVMEVAALMAIALANGGGRPPDWQDFVGIVCLLLINSTISFIEENNAGNAAAA 123
Query: 137 LMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTG 196
LMAGLAP+TKVLRD W EQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQS+LTG
Sbjct: 124 LMAGLAPKTKVLRDNQWSEQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSSLTG 183
Query: 197 ESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTAI 256
ES+PVTK P DEVFSGS CKQGEIEA+VIATGVHTFFGKAAHLVD+TNQ GHFQKVLT+I
Sbjct: 184 ESIPVTKNPSDEVFSGSICKQGEIEAIVIATGVHTFFGKAAHLVDNTNQIGHFQKVLTSI 243
Query: 257 GNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 316
GNFCICSIA+G+++E++VMYPIQ R YR+GIDNLLVLLIGGIPIAMP+VLSVTMA GSHR
Sbjct: 244 GNFCICSIALGIIVELLVMYPIQRRRYRDGIDNLLVLLIGGIPIAMPSVLSVTMATGSHR 303
Query: 317 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGA 376
L QQGAITKRMTAIEEMAGMDVLC DKTGTLTLNKLTVDKNLVEVF K + K+ V L A
Sbjct: 304 LFQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNKLTVDKNLVEVFAKGVGKEHVFLLAA 363
Query: 377 RASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISK 436
RASR+ENQDAIDA IVGML D KEARAG+ E+HF PFNPV+KRTA+TY+DSDG+WHR SK
Sbjct: 364 RASRIENQDAIDAAIVGMLADPKEARAGVREVHFFPFNPVDKRTALTYVDSDGNWHRASK 423
Query: 437 GAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLL 496
GAPEQI+ LCN +EDVR K H +IDKFA+RGLRSLAVA Q V EK K++PGGPWQ VGLL
Sbjct: 424 GAPEQILNLCNCKEDVRRKVHGVIDKFAERGLRSLAVARQEVLEKKKDAPGGPWQLVGLL 483
Query: 497 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKD 556
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSALLGQ+KD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQVKD 543
Query: 557 ANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGI 616
+++ ALPVDELIEKADGFAGVFPEHKYEIV +LQ+R HICGMTGDGVNDAPALKKADIGI
Sbjct: 544 SSLGALPVDELIEKADGFAGVFPEHKYEIVHRLQQRNHICGMTGDGVNDAPALKKADIGI 603
Query: 617 AVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLI 676
AV DATDAARGASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV GF+ I
Sbjct: 604 AVVDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFI 663
Query: 677 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGTYLAVM 736
ALIW+FDFSPFMVLIIAILNDGTIMTISKDR+KPSP PD+WKL++IF+TG+VLG Y A+M
Sbjct: 664 ALIWQFDFSPFMVLIIAILNDGTIMTISKDRMKPSPQPDSWKLRDIFSTGVVLGGYQALM 723
Query: 737 TVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLERP 796
TV+FFW + S FFS FGVR + P ++ AA+YLQVSI+SQALIFVTRSRSWS+ E P
Sbjct: 724 TVVFFWVMKDSDFFSNYFGVRPLSQRPEQMMAALYLQVSIISQALIFVTRSRSWSYAECP 783
Query: 797 GLLLIAAFIIAQLVATLIAVYANFGFARIHGIGWGWVGVIWLYSIVFYIPLDVLKFIVRY 856
GLLL+ AF+IAQLVAT IAVYAN+ FARI G GWGW GVIWLYS + YIPLD+LKF +RY
Sbjct: 784 GLLLLGAFVIAQLVATFIAVYANWSFARIEGAGWGWAGVIWLYSFLTYIPLDLLKFGIRY 843
Query: 857 ALTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQRTLHGLHPPETSELLNDKNNYREL 916
L+GKAW NLLENKTAFTTKKDYG+ EREAQWA AQRTLHGL P E + + N+KN+Y EL
Sbjct: 844 VLSGKAWLNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPAEKNNIFNEKNSYSEL 903
Query: 917 SEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 962
S+IAEQAKRRAEV RLRE++TLKGHVESVVKLKGLDI+TIQQHYTV
Sbjct: 904 SQIAEQAKRRAEVVRLREINTLKGHVESVVKLKGLDIDTIQQHYTV 949
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P20431|PMA3_ARATH ATPase 3, plasma membrane-type OS=Arabidopsis thaliana GN=AHA3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1582 bits (4096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 778/946 (82%), Positives = 865/946 (91%), Gaps = 1/946 (0%)
Query: 17 LEEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKKESKVLKFLG 76
LE+I ENVDLE+IPI EVF+QLKC+REGLS EG+ RL IFGPNKLEEKKESK+LKFLG
Sbjct: 5 LEDIVNENVDLEKIPIEEVFQQLKCSREGLSGAEGENRLQIFGPNKLEEKKESKLLKFLG 64
Query: 77 FMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAA 136
FMWNPLSWVME AAIMAIALANGGGKPPDWQDFVGIV LL+INSTISF+EENNAGNAAAA
Sbjct: 65 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVCLLVINSTISFVEENNAGNAAAA 124
Query: 137 LMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTG 196
LMAGLAP+TKVLRDG W EQEASILVPGD++SIKLGDIIPADARLL+GDPLK+DQSALTG
Sbjct: 125 LMAGLAPKTKVLRDGKWSEQEASILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTG 184
Query: 197 ESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTAI 256
ESLP TK PG+EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHFQKVLTAI
Sbjct: 185 ESLPATKGPGEEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 244
Query: 257 GNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 316
GNFCICSIA+G+ IEI+VMYPIQ R YR+GIDNLLVLLIGGIPIAMPTVLSVTMAIGSH+
Sbjct: 245 GNFCICSIAVGIAIEIVVMYPIQRRHYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHK 304
Query: 317 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGA 376
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNL+EV+ K ++KD V+L+ A
Sbjct: 305 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVYCKGVEKDEVLLFAA 364
Query: 377 RASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISK 436
RASRVENQDAIDA +VGML D KEARAGI E+HFLPFNPV+KRTA+T+IDS+G+WHR+SK
Sbjct: 365 RASRVENQDAIDAAMVGMLADPKEARAGIREIHFLPFNPVDKRTALTFIDSNGNWHRVSK 424
Query: 437 GAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLL 496
GAPEQI++LCN R D+R + H+ IDK+A+RGLRSLAV+ Q+VPEKTKES G PW+FVG+L
Sbjct: 425 GAPEQILDLCNARADLRKRVHSTIDKYAERGLRSLAVSRQTVPEKTKESSGSPWEFVGVL 484
Query: 497 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKD 556
PLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIAKETGRRLGMG+NMYPSS+LLG+ KD
Sbjct: 485 PLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIAKETGRRLGMGSNMYPSSSLLGKHKD 544
Query: 557 ANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGI 616
++ +PV++LIEKADGFAGVFPEHKYEIV+KLQERKHICGMTGDGVNDAPALKKADIGI
Sbjct: 545 EAMAHIPVEDLIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGI 604
Query: 617 AVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLI 676
AVADATDAARGASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV GF+LI
Sbjct: 605 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLI 664
Query: 677 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGTYLAVM 736
ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSP PD+WKLKEIFATG+VLG Y+A+M
Sbjct: 665 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYMAIM 724
Query: 737 TVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLERP 796
TV+FFWA + + FF F VR +R S HE+ +A+YLQVSIVSQALIFVTRSRSWSF ERP
Sbjct: 725 TVVFFWAAYKTDFFPRTFHVRDLRGSEHEMMSALYLQVSIVSQALIFVTRSRSWSFTERP 784
Query: 797 GLLLIAAFIIAQLVATLIAVYANFGFARIHGIGWGWVGVIWLYSIVFYIPLDVLKFIVRY 856
G L+ AF +AQL+AT IAVY N+ FARI GIGWGW GVIWLYSIVFY PLD++KF +RY
Sbjct: 785 GYFLLIAFWVAQLIATAIAVYGNWEFARIKGIGWGWAGVIWLYSIVFYFPLDIMKFAIRY 844
Query: 857 ALTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQRTLHGLHPPETSELLNDKNNYREL 916
L G AW N+++N+TAFTTK++YG EREAQWA AQRTLHGL ET+ ++ ++ YREL
Sbjct: 845 ILAGTAWKNIIDNRTAFTTKQNYGIEEREAQWAHAQRTLHGLQNTETANVVPERGGYREL 904
Query: 917 SEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 962
SEIA QAKRRAE+ARLRELHTLKGHVESVVKLKGLDIET HYTV
Sbjct: 905 SEIANQAKRRAEIARLRELHTLKGHVESVVKLKGLDIET-AGHYTV 949
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 962 | ||||||
| 449528321 | 951 | PREDICTED: LOW QUALITY PROTEIN: ATPase 9 | 0.985 | 0.996 | 0.875 | 0.0 | |
| 449468966 | 951 | PREDICTED: ATPase 9, plasma membrane-typ | 0.985 | 0.996 | 0.875 | 0.0 | |
| 356550652 | 949 | PREDICTED: ATPase 9, plasma membrane-typ | 0.984 | 0.997 | 0.870 | 0.0 | |
| 225462986 | 952 | PREDICTED: ATPase 8, plasma membrane-typ | 0.985 | 0.995 | 0.877 | 0.0 | |
| 224086345 | 944 | autoinhibited H+ ATPase [Populus trichoc | 0.981 | 1.0 | 0.859 | 0.0 | |
| 225442287 | 950 | PREDICTED: plasma membrane ATPase-like i | 0.983 | 0.995 | 0.871 | 0.0 | |
| 225446002 | 954 | PREDICTED: plasma membrane ATPase 4 isof | 0.988 | 0.996 | 0.864 | 0.0 | |
| 147776860 | 967 | hypothetical protein VITISV_027272 [Viti | 0.985 | 0.980 | 0.863 | 0.0 | |
| 147800127 | 954 | hypothetical protein VITISV_014422 [Viti | 0.988 | 0.996 | 0.863 | 0.0 | |
| 356558302 | 949 | PREDICTED: ATPase 9, plasma membrane-typ | 0.984 | 0.997 | 0.875 | 0.0 |
| >gi|449528321|ref|XP_004171153.1| PREDICTED: LOW QUALITY PROTEIN: ATPase 9, plasma membrane-type-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1707 bits (4422), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 830/948 (87%), Positives = 901/948 (95%)
Query: 15 ISLEEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKKESKVLKF 74
ISL+EIK EN+DLERIP+ EVFEQLKC+REGLS+EEG++RL +FGPNKLEEKKESK LKF
Sbjct: 4 ISLQEIKNENIDLERIPVEEVFEQLKCSREGLSSEEGRQRLQLFGPNKLEEKKESKFLKF 63
Query: 75 LGFMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAA 134
LGFMWNPLSWVME AAIMAI LANGGG+PPDWQDFVGI LL+INSTISFIEENNAGNAA
Sbjct: 64 LGFMWNPLSWVMEAAAIMAIVLANGGGQPPDWQDFVGITALLIINSTISFIEENNAGNAA 123
Query: 135 AALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSAL 194
AALMAGLAP+TKVLRDG W E+EA+ILVPGDVIS+KLGDIIPADARLL+GDPLKIDQSAL
Sbjct: 124 AALMAGLAPKTKVLRDGRWCEEEAAILVPGDVISVKLGDIIPADARLLEGDPLKIDQSAL 183
Query: 195 TGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLT 254
TGESLPVT+ GDEVFSGST KQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHFQKVLT
Sbjct: 184 TGESLPVTRSSGDEVFSGSTVKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT 243
Query: 255 AIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 314
AIGNFCICSIA+GMVIEI+VMYPIQHR YR+GI+NLLVLLIGGIPIAMPTVLSVTMAIGS
Sbjct: 244 AIGNFCICSIAMGMVIEIVVMYPIQHRRYRDGINNLLVLLIGGIPIAMPTVLSVTMAIGS 303
Query: 315 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILY 374
HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK+++EVFV+D+DKD ++L
Sbjct: 304 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSMIEVFVRDVDKDNLVLL 363
Query: 375 GARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRI 434
GARASRVENQDAIDACIVGMLGD KEAR GI E+HFLPFNPV+KRTAIT+ID+DGSWHR+
Sbjct: 364 GARASRVENQDAIDACIVGMLGDPKEAREGIKEVHFLPFNPVDKRTAITFIDNDGSWHRV 423
Query: 435 SKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVG 494
SKGAPEQIIELC+LRED++ KAH+IIDKFADRGLRSLAV Q+VPEKTKES GGPWQFVG
Sbjct: 424 SKGAPEQIIELCDLREDIKKKAHSIIDKFADRGLRSLAVCRQTVPEKTKESAGGPWQFVG 483
Query: 495 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQI 554
LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSS+LLGQ
Sbjct: 484 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIXKETGRRLGMGTNMYPSSSLLGQS 543
Query: 555 KDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADI 614
KD +I++LPVDELIEKADGFAGVFPEHKYEIVR+LQERKHICGMTGDGVNDAPALKKADI
Sbjct: 544 KDESIASLPVDELIEKADGFAGVFPEHKYEIVRRLQERKHICGMTGDGVNDAPALKKADI 603
Query: 615 GIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFL 674
GIAVADATDAARGASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIVLGF+
Sbjct: 604 GIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 663
Query: 675 LIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGTYLA 734
LIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSP+PD+WKL+EIFATG+VLG+YLA
Sbjct: 664 LIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGVVLGSYLA 723
Query: 735 VMTVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLE 794
VMTV+FFW +++ FFS+KFGV SIR + ELTAAVYLQVS VSQALIFVTRSRSWSF+E
Sbjct: 724 VMTVVFFWIANATDFFSDKFGVHSIRGNDGELTAAVYLQVSTVSQALIFVTRSRSWSFVE 783
Query: 795 RPGLLLIAAFIIAQLVATLIAVYANFGFARIHGIGWGWVGVIWLYSIVFYIPLDVLKFIV 854
RPGLLL+ AF +AQLVATLIAVYAN+GFA + GIGWGW GVIW+YS++FYIPLDVLKF
Sbjct: 784 RPGLLLVFAFFVAQLVATLIAVYANWGFAEMKGIGWGWAGVIWIYSVIFYIPLDVLKFAT 843
Query: 855 RYALTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQRTLHGLHPPETSELLNDKNNYR 914
RYAL+GKAW+N+++N+TAFT+KKDYG GEREAQWA AQRTLHGL PPETSEL NDK NYR
Sbjct: 844 RYALSGKAWNNMIQNRTAFTSKKDYGIGEREAQWAAAQRTLHGLQPPETSELFNDKTNYR 903
Query: 915 ELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 962
ELSEIAEQAK+RAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV
Sbjct: 904 ELSEIAEQAKKRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 951
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449468966|ref|XP_004152192.1| PREDICTED: ATPase 9, plasma membrane-type-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1707 bits (4420), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 830/948 (87%), Positives = 901/948 (95%)
Query: 15 ISLEEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKKESKVLKF 74
ISL+EIK EN+DLERIP+ EVFEQLKC+REGLS+EEG++RL +FGPNKLEEKKESK LKF
Sbjct: 4 ISLQEIKNENIDLERIPVEEVFEQLKCSREGLSSEEGRQRLQLFGPNKLEEKKESKFLKF 63
Query: 75 LGFMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAA 134
LGFMWNPLSWVME AAIMAI LANGGG+PPDWQDFVGI LL+INSTISFIEENNAGNAA
Sbjct: 64 LGFMWNPLSWVMEAAAIMAIVLANGGGQPPDWQDFVGITALLIINSTISFIEENNAGNAA 123
Query: 135 AALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSAL 194
AALMAGLAP+TKVLRDG W E+EA+ILVPGDVIS+KLGDIIPADARLL+GDPLKIDQSAL
Sbjct: 124 AALMAGLAPKTKVLRDGRWCEEEAAILVPGDVISVKLGDIIPADARLLEGDPLKIDQSAL 183
Query: 195 TGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLT 254
TGESLPVT+ GDEVFSGST KQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHFQKVLT
Sbjct: 184 TGESLPVTRSSGDEVFSGSTVKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT 243
Query: 255 AIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 314
AIGNFCICSIA+GMVIEI+VMYPIQHR YR+GI+NLLVLLIGGIPIAMPTVLSVTMAIGS
Sbjct: 244 AIGNFCICSIAMGMVIEIVVMYPIQHRRYRDGINNLLVLLIGGIPIAMPTVLSVTMAIGS 303
Query: 315 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILY 374
HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK+++EVFV+D+DKD ++L
Sbjct: 304 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSMIEVFVRDVDKDNLVLL 363
Query: 375 GARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRI 434
GARASRVENQDAIDACIVGMLGD KEAR GI E+HFLPFNPV+KRTAIT+ID+DGSWHR+
Sbjct: 364 GARASRVENQDAIDACIVGMLGDPKEAREGIKEVHFLPFNPVDKRTAITFIDNDGSWHRV 423
Query: 435 SKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVG 494
SKGAPEQIIELC+LRED++ KAH+IIDKFADRGLRSLAV Q+VPEKTKES GGPWQFVG
Sbjct: 424 SKGAPEQIIELCDLREDIKKKAHSIIDKFADRGLRSLAVCRQTVPEKTKESAGGPWQFVG 483
Query: 495 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQI 554
LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSS+LLGQ
Sbjct: 484 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQS 543
Query: 555 KDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADI 614
KD +I++LPVDELIEKADGFAGVFPEHKYEIVR+LQERKHICGMTGDGVNDAPALKKADI
Sbjct: 544 KDESIASLPVDELIEKADGFAGVFPEHKYEIVRRLQERKHICGMTGDGVNDAPALKKADI 603
Query: 615 GIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFL 674
GIAVADATDAARGASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIVLGF+
Sbjct: 604 GIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 663
Query: 675 LIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGTYLA 734
LIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSP+PD+WKL+EIFATG+VLG+YLA
Sbjct: 664 LIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGVVLGSYLA 723
Query: 735 VMTVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLE 794
VMTV+FFW +++ FFS+KFGV SIR + ELTAAVYLQVS VSQALIFVTRSRSWSF+E
Sbjct: 724 VMTVVFFWIANATDFFSDKFGVHSIRGNDGELTAAVYLQVSTVSQALIFVTRSRSWSFVE 783
Query: 795 RPGLLLIAAFIIAQLVATLIAVYANFGFARIHGIGWGWVGVIWLYSIVFYIPLDVLKFIV 854
RPGLLL+ AF +AQLVATLIAVYAN+GFA + GIGWGW GVIW+YS++FYIPLDVLKF
Sbjct: 784 RPGLLLVFAFFVAQLVATLIAVYANWGFAEMKGIGWGWAGVIWIYSVIFYIPLDVLKFAT 843
Query: 855 RYALTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQRTLHGLHPPETSELLNDKNNYR 914
RYAL+GKAW+N+++N+TAFT+KKDYG GEREAQWA AQRTLHGL PPETSEL NDK NYR
Sbjct: 844 RYALSGKAWNNMIQNRTAFTSKKDYGIGEREAQWAAAQRTLHGLQPPETSELFNDKTNYR 903
Query: 915 ELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 962
ELSEIAEQAK+RAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV
Sbjct: 904 ELSEIAEQAKKRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 951
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356550652|ref|XP_003543699.1| PREDICTED: ATPase 9, plasma membrane-type-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1702 bits (4408), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 824/947 (87%), Positives = 900/947 (95%)
Query: 16 SLEEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKKESKVLKFL 75
SLE IK E VDLERIP++EVF +L C++EGLSNEEGQKRL +FGPNKLEEKKESK+LKFL
Sbjct: 3 SLENIKNETVDLERIPVDEVFRELNCSKEGLSNEEGQKRLQVFGPNKLEEKKESKLLKFL 62
Query: 76 GFMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAA 135
GFMWNPLSWVME AAIMAI LANGGG+PPDWQDFVGI+VLL++NSTISFIEENNAGNAAA
Sbjct: 63 GFMWNPLSWVMEAAAIMAIVLANGGGEPPDWQDFVGIMVLLVVNSTISFIEENNAGNAAA 122
Query: 136 ALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALT 195
ALMAGLAP+TKVLRDG W E+EASILVPGD+ISIKLGDIIPADARLL+GDPLKIDQSALT
Sbjct: 123 ALMAGLAPKTKVLRDGRWSEEEASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALT 182
Query: 196 GESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTA 255
GESLP TK PGDE+FSGST KQGEIEAVVIATGVHTFFGKAAHLVDS NQ GHFQKVLTA
Sbjct: 183 GESLPTTKHPGDEIFSGSTVKQGEIEAVVIATGVHTFFGKAAHLVDSCNQVGHFQKVLTA 242
Query: 256 IGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 315
IGNFCICSIA+GM+IEI+VMYPIQHR YR+GI+NLLVLLIGGIPIAMPTVLSVTMAIGSH
Sbjct: 243 IGNFCICSIAVGMIIEIVVMYPIQHRKYRSGINNLLVLLIGGIPIAMPTVLSVTMAIGSH 302
Query: 316 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYG 375
RLS+QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNL+EVF +D DKDTV+L G
Sbjct: 303 RLSEQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFARDADKDTVMLLG 362
Query: 376 ARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRIS 435
ARASRVENQDAIDACIVGMLGD KEAR GI E+HFLPFNPV+KRTAITYID++G+WHR+S
Sbjct: 363 ARASRVENQDAIDACIVGMLGDPKEARDGIKEVHFLPFNPVDKRTAITYIDTEGNWHRVS 422
Query: 436 KGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGL 495
KGAPEQIIELC LREDV+ KA +IIDKFADRGLRSLAVA+Q VPEK+KES GGPW FVGL
Sbjct: 423 KGAPEQIIELCKLREDVKKKALSIIDKFADRGLRSLAVAKQEVPEKSKESAGGPWTFVGL 482
Query: 496 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIK 555
LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMG+NMYPSS+LLG+ K
Sbjct: 483 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGSNMYPSSSLLGEHK 542
Query: 556 DANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG 615
D +I+ LPVDELIEKADGFAGVFPEHKYEIV++LQ+RKHICGMTGDGVNDAPALK+ADIG
Sbjct: 543 DESIAGLPVDELIEKADGFAGVFPEHKYEIVKRLQDRKHICGMTGDGVNDAPALKRADIG 602
Query: 616 IAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLL 675
IAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGF+L
Sbjct: 603 IAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 662
Query: 676 IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGTYLAV 735
+ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPD+WKL+EIF TGIVLGTYLAV
Sbjct: 663 LALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLREIFVTGIVLGTYLAV 722
Query: 736 MTVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLER 795
MTV+FFWA H+S FFS+KFGVRSIR++ ELTAAVYLQVSIVSQALIFVTRSRSWS++ER
Sbjct: 723 MTVVFFWAAHASDFFSDKFGVRSIRENYSELTAAVYLQVSIVSQALIFVTRSRSWSYVER 782
Query: 796 PGLLLIAAFIIAQLVATLIAVYANFGFARIHGIGWGWVGVIWLYSIVFYIPLDVLKFIVR 855
PG+ L+ AF IAQL+AT+IAVYAN+ FA++ GIGWGW GVIWLYSI+FYIP+D+LKFI+R
Sbjct: 783 PGMFLLVAFFIAQLIATVIAVYANWEFAKMKGIGWGWAGVIWLYSIIFYIPMDILKFIIR 842
Query: 856 YALTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQRTLHGLHPPETSELLNDKNNYRE 915
YALTGKAW+N+ EN+ AFTTKKDYG+GEREAQWA AQRTLHGL+PPET E+LN+KNNYRE
Sbjct: 843 YALTGKAWNNITENRVAFTTKKDYGKGEREAQWAAAQRTLHGLNPPETEEMLNEKNNYRE 902
Query: 916 LSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 962
LSE+AEQAK+RAEVARLRELHTLKGHVESVVKLKGLDIET+QQHYTV
Sbjct: 903 LSELAEQAKKRAEVARLRELHTLKGHVESVVKLKGLDIETMQQHYTV 949
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225462986|ref|XP_002263241.1| PREDICTED: ATPase 8, plasma membrane-type [Vitis vinifera] gi|296084595|emb|CBI25616.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1699 bits (4401), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 832/948 (87%), Positives = 894/948 (94%)
Query: 15 ISLEEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKKESKVLKF 74
+SLEEIK E+VDLERIPI EVFEQLKCT++GL++EEG+ RL IFG NKLEEKKESK+LKF
Sbjct: 5 MSLEEIKNESVDLERIPIEEVFEQLKCTKDGLTSEEGEHRLQIFGHNKLEEKKESKILKF 64
Query: 75 LGFMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAA 134
LGFMWNPLSWVME AAIMAI LANGGGKPPDWQDFVGI VLL+INSTISFIEENNAGNAA
Sbjct: 65 LGFMWNPLSWVMECAAIMAIVLANGGGKPPDWQDFVGITVLLIINSTISFIEENNAGNAA 124
Query: 135 AALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSAL 194
AALMAGLAP+TKVLRDG W EQEA+ILVPGDVISIKLGDI+PADARLL+GDPLKIDQSAL
Sbjct: 125 AALMAGLAPKTKVLRDGKWSEQEAAILVPGDVISIKLGDIVPADARLLEGDPLKIDQSAL 184
Query: 195 TGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLT 254
TGESLPVTK PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHFQKVLT
Sbjct: 185 TGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLT 244
Query: 255 AIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 314
AIGNFCICSIA+GM++EI+VMYPIQ R YR GIDNLLVLLIGGIPIAMPTVLSVTMAIGS
Sbjct: 245 AIGNFCICSIAVGMLVEIVVMYPIQQRKYREGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 304
Query: 315 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILY 374
HRLS+QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK L+EVF KDMDKD+V+L
Sbjct: 305 HRLSEQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKTLIEVFPKDMDKDSVVLL 364
Query: 375 GARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRI 434
ARASRVENQDAIDA IVGMLGD KEARAGITE+HFLPFNPV+KRTAITYID++G WHR
Sbjct: 365 AARASRVENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITYIDANGDWHRC 424
Query: 435 SKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVG 494
SKGAPEQII+LC L+ DV++KAH+IID +ADRGLRSLAVA Q++PEKTKES G PW+FVG
Sbjct: 425 SKGAPEQIIDLCELKGDVKDKAHSIIDNYADRGLRSLAVARQTIPEKTKESAGKPWEFVG 484
Query: 495 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQI 554
LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSS+LLGQ
Sbjct: 485 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQS 544
Query: 555 KDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADI 614
KD +I+ +PVDELIEKADGFAGVFPEHKYEIV+KLQERKHICGMTGDGVNDAPALKKADI
Sbjct: 545 KDESIATIPVDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADI 604
Query: 615 GIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFL 674
GIAVADATDAAR ASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGF+
Sbjct: 605 GIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 664
Query: 675 LIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGTYLA 734
LIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSP+PD+WKLKEIFATGIVLGTYLA
Sbjct: 665 LIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFATGIVLGTYLA 724
Query: 735 VMTVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLE 794
++TVLFFW IH + FFS+KFGVRSIR + E+TAA+YLQVSIVSQALIFVTRS+SWSF+E
Sbjct: 725 LITVLFFWLIHDTDFFSDKFGVRSIRHNRDEVTAALYLQVSIVSQALIFVTRSQSWSFVE 784
Query: 795 RPGLLLIAAFIIAQLVATLIAVYANFGFARIHGIGWGWVGVIWLYSIVFYIPLDVLKFIV 854
RPGLLL+ AFI AQLVAT IAVY ++GFARI GIGWGW G IWL+SI+ Y PLD+LKFI+
Sbjct: 785 RPGLLLVGAFIAAQLVATCIAVYPSWGFARIEGIGWGWAGAIWLFSIITYFPLDILKFII 844
Query: 855 RYALTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQRTLHGLHPPETSELLNDKNNYR 914
RY L+GKAWDNLL+NKTAFTTKKDYGRGEREAQWALAQRTLHGL PPETS L ND ++YR
Sbjct: 845 RYGLSGKAWDNLLQNKTAFTTKKDYGRGEREAQWALAQRTLHGLQPPETSNLFNDNSSYR 904
Query: 915 ELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 962
ELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV
Sbjct: 905 ELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 952
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224086345|ref|XP_002307856.1| autoinhibited H+ ATPase [Populus trichocarpa] gi|222853832|gb|EEE91379.1| autoinhibited H+ ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1697 bits (4395), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 813/946 (85%), Positives = 879/946 (92%), Gaps = 2/946 (0%)
Query: 17 LEEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKKESKVLKFLG 76
+E+IK E++DLE+IPI EVFE+LKCT+EGL EG++RL IFGPNKLEEKKESK+LKFLG
Sbjct: 1 MEDIKNESIDLEKIPIEEVFEKLKCTKEGLRTTEGEERLRIFGPNKLEEKKESKILKFLG 60
Query: 77 FMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAA 136
FMWNPLSWVME AAIMAI LANGGGKPPDWQDFVGI+VLL+INSTISFIEENNAGNAAA+
Sbjct: 61 FMWNPLSWVMEAAAIMAIVLANGGGKPPDWQDFVGIIVLLIINSTISFIEENNAGNAAAS 120
Query: 137 LMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTG 196
LMAGLAP+TKVLRDG W EQ+A+ILVPGD+ISIKLGDIIPADARL+ GDPLKIDQSALTG
Sbjct: 121 LMAGLAPKTKVLRDGKWSEQDAAILVPGDIISIKLGDIIPADARLMVGDPLKIDQSALTG 180
Query: 197 ESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTAI 256
ESLPVTK PG V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN GHFQKVLTAI
Sbjct: 181 ESLPVTKYPGSGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTAI 240
Query: 257 GNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 316
GNFCICSIAIGM+IEIIVMYPIQHR YR+GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 241 GNFCICSIAIGMLIEIIVMYPIQHRRYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 300
Query: 317 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGA 376
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK L+EVFVKDMDKDT+IL+ A
Sbjct: 301 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKTLIEVFVKDMDKDTLILHAA 360
Query: 377 RASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISK 436
RASR ENQDAIDA IVGMLGD EAR+GI E+HFLPFNPVEKRTAITY D +G W+R SK
Sbjct: 361 RASRTENQDAIDASIVGMLGDPSEARSGIIEVHFLPFNPVEKRTAITYFDGNGDWYRSSK 420
Query: 437 GAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLL 496
GAPEQIIELC L+ ++R KAH II+ FADRGLRSL VA +PEK KES G PW+FVGLL
Sbjct: 421 GAPEQIIELCELKGNIRKKAHEIINNFADRGLRSLGVARHRIPEKNKESAGAPWEFVGLL 480
Query: 497 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKD 556
PLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAI KETGRRLGMGTNMYPSS+LLG KD
Sbjct: 481 PLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGDNKD 540
Query: 557 ANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGI 616
+I+++PVDELIEKADGFAGVFPEHKYEIV+KLQERKHICGMTGDGVNDAPALKKADIGI
Sbjct: 541 ESIASVPVDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGI 600
Query: 617 AVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLI 676
AVADATDAAR ASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLL+
Sbjct: 601 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLV 660
Query: 677 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGTYLAVM 736
ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPD+WKLKEIFA G+VLGTYLA++
Sbjct: 661 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLKEIFAMGVVLGTYLAII 720
Query: 737 TVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLERP 796
TVLFFW H + FFS+KFGVRSIR P ELTAA+YLQVSI+SQALIFVTRSRSWSF ERP
Sbjct: 721 TVLFFWLAHGTDFFSDKFGVRSIRGKPDELTAALYLQVSIISQALIFVTRSRSWSFTERP 780
Query: 797 GLLLIAAFIIAQLVATLIAVYANFGFARIHGIGWGWVGVIWLYSIVFYIPLDVLKFIVRY 856
GLLL+ AF+ AQLVAT+IAVYAN+GFARI GIGWGW G+IW++SI+ YIPLD+LKFI RY
Sbjct: 781 GLLLVGAFLAAQLVATVIAVYANWGFARIQGIGWGWAGIIWIFSIITYIPLDILKFITRY 840
Query: 857 ALTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQRTLHGLHPPETSELLNDKNNYREL 916
ALTGKAWDNLLENKTAFTTKKDYG+GEREAQWA AQRTLHGL PET + NDK +YREL
Sbjct: 841 ALTGKAWDNLLENKTAFTTKKDYGKGEREAQWATAQRTLHGLQSPET--MKNDKASYREL 898
Query: 917 SEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 962
SE+AEQAKRRAEVARLRE+HTLKGHVESVVK+KGLDIETIQQHYTV
Sbjct: 899 SELAEQAKRRAEVARLREIHTLKGHVESVVKMKGLDIETIQQHYTV 944
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225442287|ref|XP_002280201.1| PREDICTED: plasma membrane ATPase-like isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1692 bits (4382), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 824/946 (87%), Positives = 888/946 (93%)
Query: 17 LEEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKKESKVLKFLG 76
LEEIK E VDLERIP+ EVFEQLKCTR+GL+ EEG+KRL IFGPNKLEEK+ESK+LKFLG
Sbjct: 5 LEEIKNETVDLERIPVEEVFEQLKCTRDGLTTEEGEKRLQIFGPNKLEEKEESKLLKFLG 64
Query: 77 FMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAA 136
FMWNPLSWVME AAIMAI LANGGG+ PDWQDFVGIVVLL INSTISFIEENNAGNAAAA
Sbjct: 65 FMWNPLSWVMEAAAIMAIVLANGGGEDPDWQDFVGIVVLLFINSTISFIEENNAGNAAAA 124
Query: 137 LMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTG 196
LMAGLAP+ KVLRDG W EQEA ILVPGDVISIKLGDIIPADARLL+GDPLKIDQ+ALTG
Sbjct: 125 LMAGLAPKAKVLRDGRWSEQEAEILVPGDVISIKLGDIIPADARLLEGDPLKIDQAALTG 184
Query: 197 ESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTAI 256
ESLPVT+ PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TN +GHFQKVLTAI
Sbjct: 185 ESLPVTRNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDNTNHQGHFQKVLTAI 244
Query: 257 GNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 316
GNFCICSIA+G+++EI+VMYPIQ R YR+GI+NLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 245 GNFCICSIALGIIVEIVVMYPIQRRKYRDGINNLLVLLIGGIPIAMPTVLSVTMAIGSHR 304
Query: 317 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGA 376
LS+QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK+++E+F KD+D D VIL A
Sbjct: 305 LSKQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSMIEIFSKDVDSDMVILLAA 364
Query: 377 RASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISK 436
RASRVENQDAIDACIVGML D EAR+GITE+HFLPFNPVEKRTAITYIDSDG+WHR SK
Sbjct: 365 RASRVENQDAIDACIVGMLADPSEARSGITEVHFLPFNPVEKRTAITYIDSDGNWHRASK 424
Query: 437 GAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLL 496
GAPEQIIELCNL++ + KAH IIDKFADRGLRSLAV++Q+VPEK KES GGPWQFVGLL
Sbjct: 425 GAPEQIIELCNLKDHAKKKAHAIIDKFADRGLRSLAVSQQTVPEKNKESAGGPWQFVGLL 484
Query: 497 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKD 556
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSS+LLGQ KD
Sbjct: 485 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKD 544
Query: 557 ANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGI 616
+I+ LP+DELIEKADGFAGVFPEHKYEIV++LQ++KHICGMTGDGVNDAPALK+ADIGI
Sbjct: 545 HSIADLPIDELIEKADGFAGVFPEHKYEIVKRLQDKKHICGMTGDGVNDAPALKRADIGI 604
Query: 617 AVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLI 676
AVADATDAAR ASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGF LI
Sbjct: 605 AVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFALI 664
Query: 677 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGTYLAVM 736
ALIWKFDFSPFMVLIIAILNDGTIMTI+KDRVKPSP+PD+WKL+EIFATGIVLGTYLAVM
Sbjct: 665 ALIWKFDFSPFMVLIIAILNDGTIMTIAKDRVKPSPLPDSWKLREIFATGIVLGTYLAVM 724
Query: 737 TVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLERP 796
TV+FFWA H S FFS+KF VRSIR + HELTA VYLQVSIVSQALIFVTRS+ WSF+ERP
Sbjct: 725 TVVFFWAAHDSNFFSDKFSVRSIRGNKHELTAVVYLQVSIVSQALIFVTRSQGWSFIERP 784
Query: 797 GLLLIAAFIIAQLVATLIAVYANFGFARIHGIGWGWVGVIWLYSIVFYIPLDVLKFIVRY 856
GLLL++AF+IAQLVAT IAVYAN+GFA+I G GWGW GVIWLYSIVFY PLD+LKF +RY
Sbjct: 785 GLLLVSAFLIAQLVATFIAVYANWGFAKIKGCGWGWAGVIWLYSIVFYFPLDILKFFIRY 844
Query: 857 ALTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQRTLHGLHPPETSELLNDKNNYREL 916
ALTGKAWD LL+NKTAFTTKKDYGRGEREAQWALAQRTLHGL PP+TSEL +K NYREL
Sbjct: 845 ALTGKAWDTLLQNKTAFTTKKDYGRGEREAQWALAQRTLHGLQPPQTSELFTEKGNYREL 904
Query: 917 SEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 962
SE+AEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIE IQQHYTV
Sbjct: 905 SEMAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIEGIQQHYTV 950
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225446002|ref|XP_002267501.1| PREDICTED: plasma membrane ATPase 4 isoform 1 [Vitis vinifera] gi|297735422|emb|CBI17862.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1691 bits (4379), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 822/951 (86%), Positives = 892/951 (93%)
Query: 12 NNGISLEEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKKESKV 71
+ ISLEEIK E VDLE+IPI EVFEQLKCT+EGL+++EG+ RL IFGPNKLEEKKESK
Sbjct: 4 DKSISLEEIKNETVDLEKIPIEEVFEQLKCTKEGLTSQEGEARLQIFGPNKLEEKKESKF 63
Query: 72 LKFLGFMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAG 131
LKFLGFMWNPLSWVME AA+MAI LANG G+PPDWQDFVGIV LL+INSTISFIEENNAG
Sbjct: 64 LKFLGFMWNPLSWVMEAAALMAIVLANGDGQPPDWQDFVGIVCLLVINSTISFIEENNAG 123
Query: 132 NAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQ 191
NAAAALMAGLAP+TKVLRDG W EQ+A+ILVPGD+ISIKLGDIIPADARLL+GDPLK+DQ
Sbjct: 124 NAAAALMAGLAPKTKVLRDGRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQ 183
Query: 192 SALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQK 251
SALTGESLPVTK P DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHFQK
Sbjct: 184 SALTGESLPVTKHPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQK 243
Query: 252 VLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMA 311
VLTAIGNFCICSIA+GM++EIIVMYPIQHR YR+GIDNLLVLLIGGIPIAMPTVLSVTMA
Sbjct: 244 VLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMA 303
Query: 312 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTV 371
IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NLVEVF K +DK+ V
Sbjct: 304 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLVEVFAKGVDKEHV 363
Query: 372 ILYGARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSW 431
+L ARASR ENQDAIDA IVGML D KEARAGI E+HFLPFNPV+KRTA+TYID+DG W
Sbjct: 364 LLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDADGKW 423
Query: 432 HRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQ 491
HR SKGAPEQI++LC +EDV+ KAH+IIDKFA+RGLRSLAV Q VPEK+KES G PWQ
Sbjct: 424 HRASKGAPEQILDLCKCKEDVKKKAHSIIDKFAERGLRSLAVGRQEVPEKSKESLGSPWQ 483
Query: 492 FVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALL 551
FVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS++LL
Sbjct: 484 FVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLL 543
Query: 552 GQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKK 611
GQ KDA+I+ALPV+ELIEKADGFAGVFPEHKYEIV+KLQERKHICGMTGDGVNDAPALKK
Sbjct: 544 GQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKK 603
Query: 612 ADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVL 671
ADIGIAVADATDAARGASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV
Sbjct: 604 ADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVF 663
Query: 672 GFLLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGT 731
GFL IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSP+PD+WKL+EIFATG+VLG
Sbjct: 664 GFLFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGVVLGG 723
Query: 732 YLAVMTVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWS 791
YLA+MTV+FFW + + FF +KFGV+SIRDSPHE+ AA+YLQVS+VSQALIFVTRSRSWS
Sbjct: 724 YLALMTVIFFWVMKDTDFFPDKFGVKSIRDSPHEMMAALYLQVSVVSQALIFVTRSRSWS 783
Query: 792 FLERPGLLLIAAFIIAQLVATLIAVYANFGFARIHGIGWGWVGVIWLYSIVFYIPLDVLK 851
F+ERPGLLL+ AFIIAQLVATLIAVYAN+GFARI G+GWGW GV+W+YS+VFY+PLD +K
Sbjct: 784 FVERPGLLLVTAFIIAQLVATLIAVYANWGFARIKGMGWGWAGVVWIYSVVFYVPLDFIK 843
Query: 852 FIVRYALTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQRTLHGLHPPETSELLNDKN 911
F +RY L+GKAW NLLENKTAFTTKKDYG+ EREAQWALAQRTLHGL PPETS L NDKN
Sbjct: 844 FFIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETSNLFNDKN 903
Query: 912 NYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 962
+YRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDI+TIQQHYTV
Sbjct: 904 SYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 954
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147776860|emb|CAN61424.1| hypothetical protein VITISV_027272 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1690 bits (4377), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 832/963 (86%), Positives = 893/963 (92%), Gaps = 15/963 (1%)
Query: 15 ISLEEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKK------- 67
+SLEEIK E+VDLERIPI EVFEQLKCT++GL++EEG+ RL IFG NKLEEKK
Sbjct: 5 MSLEEIKNESVDLERIPIEEVFEQLKCTKDGLTSEEGEXRLQIFGHNKLEEKKANFFYFI 64
Query: 68 --------ESKVLKFLGFMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLIN 119
ESK+LKFLGFMWNPLSWVME AAIMAI LANGGGKPPDWQDFVGI VLL+IN
Sbjct: 65 TTLQYSFTESKILKFLGFMWNPLSWVMECAAIMAIVLANGGGKPPDWQDFVGITVLLIIN 124
Query: 120 STISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADA 179
STISFIEENNAGNAAAALMAGLAP+TKVLRDG W EQEA+ILVPGDVISIKLGDI+PADA
Sbjct: 125 STISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDVISIKLGDIVPADA 184
Query: 180 RLLDGDPLKIDQSALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHL 239
RLL+GDPLKIDQSALTGESLPVTK PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHL
Sbjct: 185 RLLEGDPLKIDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHL 244
Query: 240 VDSTNQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIP 299
VDSTNQ GHFQKVLTAIGNFCICSIA+GM++EI+VMYPIQ R YR GIDNLLVLLIGGIP
Sbjct: 245 VDSTNQVGHFQKVLTAIGNFCICSIAVGMLVEIVVMYPIQQRKYREGIDNLLVLLIGGIP 304
Query: 300 IAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLV 359
IAMPTVLSVTMAIGSHRLS+QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK L+
Sbjct: 305 IAMPTVLSVTMAIGSHRLSEQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKTLI 364
Query: 360 EVFVKDMDKDTVILYGARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKR 419
EVF KDMDKD+V+L ARASRVENQDAIDA IVGMLGD KEARAGITE+HFLPFNPV+KR
Sbjct: 365 EVFPKDMDKDSVVLLAARASRVENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKR 424
Query: 420 TAITYIDSDGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVP 479
TAITYID++G WHR SKGAPEQII+LC L+ DV++KAH+IID +ADRGLRSLAVA Q++P
Sbjct: 425 TAITYIDANGDWHRCSKGAPEQIIDLCELKGDVKDKAHSIIDNYADRGLRSLAVARQTIP 484
Query: 480 EKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLG 539
EKTKES G PW+FVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLG
Sbjct: 485 EKTKESXGKPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 544
Query: 540 MGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMT 599
MGTNMYPSS+LLGQ KD +I+ +PVDELIEKADGFAGVFPEHKYEIV+KLQERKHICGMT
Sbjct: 545 MGTNMYPSSSLLGQSKDESIATIPVDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMT 604
Query: 600 GDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYT 659
GDGVNDAPALKKADIGIAVADATDAAR ASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYT
Sbjct: 605 GDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYT 664
Query: 660 IYAVSITIRIVLGFLLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKL 719
IYAVSITIRIVLGF+LIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSP+PD+WKL
Sbjct: 665 IYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPMPDSWKL 724
Query: 720 KEIFATGIVLGTYLAVMTVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQ 779
KEIFATGIVLGTYLA++TVLFFW IH + FFS+KFGVRSIR + E TAA+YLQVSIVSQ
Sbjct: 725 KEIFATGIVLGTYLALITVLFFWLIHDTDFFSDKFGVRSIRHNRDEXTAALYLQVSIVSQ 784
Query: 780 ALIFVTRSRSWSFLERPGLLLIAAFIIAQLVATLIAVYANFGFARIHGIGWGWVGVIWLY 839
ALIFVTRS+SWSF+ERPGLLL+ AFI AQLVAT IAVY ++GFARI GIGWGW G IWL+
Sbjct: 785 ALIFVTRSQSWSFVERPGLLLVGAFIAAQLVATCIAVYPSWGFARIEGIGWGWAGAIWLF 844
Query: 840 SIVFYIPLDVLKFIVRYALTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQRTLHGLH 899
SI+ Y PLD+LKFI+RY L+GKAWDNLL+NKTAFTTKKDYGRGEREAQWALAQRTLHGL
Sbjct: 845 SIITYFPLDILKFIIRYGLSGKAWDNLLQNKTAFTTKKDYGRGEREAQWALAQRTLHGLQ 904
Query: 900 PPETSELLNDKNNYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQH 959
PPETS L ND ++YRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQH
Sbjct: 905 PPETSNLFNDNSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQH 964
Query: 960 YTV 962
YTV
Sbjct: 965 YTV 967
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147800127|emb|CAN64375.1| hypothetical protein VITISV_014422 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1688 bits (4372), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 821/951 (86%), Positives = 891/951 (93%)
Query: 12 NNGISLEEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKKESKV 71
+ ISLEEIK E VDLE+IPI EVFEQLKCT+EGL+++EG+ RL IFGPNKLEEKKESK
Sbjct: 4 DKSISLEEIKNETVDLEKIPIEEVFEQLKCTKEGLTSQEGEARLQIFGPNKLEEKKESKF 63
Query: 72 LKFLGFMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAG 131
LKFLGFMWNPLSWVME AA+MAI LANG G+PPDWQDFVGIV LL+INSTISFIEENNAG
Sbjct: 64 LKFLGFMWNPLSWVMEAAALMAIVLANGDGQPPDWQDFVGIVCLLVINSTISFIEENNAG 123
Query: 132 NAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQ 191
NAAAALMAGLAP+TKVLRDG W EQ+A+ILVPGD+ISIKLGDIIPADARLL+GDPLK+DQ
Sbjct: 124 NAAAALMAGLAPKTKVLRDGRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLKVDQ 183
Query: 192 SALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQK 251
SALTGESLPVTK P DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHFQK
Sbjct: 184 SALTGESLPVTKHPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQK 243
Query: 252 VLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMA 311
VLTAIGNFCICSIA+GM++EIIVMYPIQHR YR+GIDNLLVLLIGGIPIAMPTVLSVTMA
Sbjct: 244 VLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMA 303
Query: 312 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTV 371
IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VD+NLVEVF K +DK+ V
Sbjct: 304 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLVEVFAKGVDKEHV 363
Query: 372 ILYGARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSW 431
+L ARASR ENQDAIDA IVGML D KEARAGI E+HFLPFNPV+KRTA+TYID+DG W
Sbjct: 364 LLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDADGKW 423
Query: 432 HRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQ 491
HR SKGAPEQI++LC +EDV+ KAH+IIDKFA+RGLRSLAV Q VPEK+KES G PWQ
Sbjct: 424 HRASKGAPEQILDLCKCKEDVKKKAHSIIDKFAERGLRSLAVGRQEVPEKSKESLGSPWQ 483
Query: 492 FVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALL 551
FVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS++LL
Sbjct: 484 FVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLL 543
Query: 552 GQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKK 611
GQ KDA+I+ALPV+ELIEKADGFAGVFPEHKYEIV+KLQERKHICGMTGDGVNDAPALKK
Sbjct: 544 GQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKK 603
Query: 612 ADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVL 671
ADIGIAVADATDAARGASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV
Sbjct: 604 ADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVF 663
Query: 672 GFLLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGT 731
GFL IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSP+PD+WKL+EIFATG+VLG
Sbjct: 664 GFLFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGVVLGG 723
Query: 732 YLAVMTVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWS 791
YLA+MTV+FFW + + FF +KFGV+SIRDSPHE+ AA+YLQVS+VSQALIFVTRSRSWS
Sbjct: 724 YLALMTVIFFWVMKDTDFFPDKFGVKSIRDSPHEMMAALYLQVSVVSQALIFVTRSRSWS 783
Query: 792 FLERPGLLLIAAFIIAQLVATLIAVYANFGFARIHGIGWGWVGVIWLYSIVFYIPLDVLK 851
F+ERPGLLL+ AFIIAQLVATLIAVYAN+GFARI G+GWGW GV+W+YS+VFY+PLD +K
Sbjct: 784 FVERPGLLLVTAFIIAQLVATLIAVYANWGFARIKGMGWGWAGVVWIYSVVFYVPLDFIK 843
Query: 852 FIVRYALTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQRTLHGLHPPETSELLNDKN 911
F +RY L+GKAW NLLENKTAFTTKKDYG+ EREAQWALAQRTLHGL PPETS L DKN
Sbjct: 844 FFIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETSNLFXDKN 903
Query: 912 NYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 962
+YRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDI+TIQQHYTV
Sbjct: 904 SYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 954
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356558302|ref|XP_003547446.1| PREDICTED: ATPase 9, plasma membrane-type-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1687 bits (4369), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 829/947 (87%), Positives = 901/947 (95%)
Query: 16 SLEEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKKESKVLKFL 75
SLE IK E VDLERIPI+EVF +L C++EGLSNEEGQKRL +FGPNKLEEKKESKVLKFL
Sbjct: 3 SLENIKNEAVDLERIPIDEVFRELNCSKEGLSNEEGQKRLQVFGPNKLEEKKESKVLKFL 62
Query: 76 GFMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAA 135
GFMWNPLSWVME AAIMAIALANGGG+PPDWQDFVGI+VLL++NSTISFIEENNAGNAAA
Sbjct: 63 GFMWNPLSWVMEAAAIMAIALANGGGEPPDWQDFVGIMVLLVVNSTISFIEENNAGNAAA 122
Query: 136 ALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALT 195
ALMAGLAP+TKVLRDG W E+EASILVPGD+ISIKLGDIIPADARLL+GDPLKIDQSALT
Sbjct: 123 ALMAGLAPKTKVLRDGRWSEEEASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALT 182
Query: 196 GESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTA 255
GESLP TK PGDE+FSGST KQGEIEAVVIATGVHTFFGKAAHLVDS NQ GHFQKVLTA
Sbjct: 183 GESLPTTKHPGDEIFSGSTVKQGEIEAVVIATGVHTFFGKAAHLVDSCNQVGHFQKVLTA 242
Query: 256 IGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 315
IGNFCICSIA+GM+IEI+VMYPIQHR YR+GI+NLLVLLIGGIPIAMPTVLSVTMAIGSH
Sbjct: 243 IGNFCICSIAVGMIIEIVVMYPIQHRKYRSGINNLLVLLIGGIPIAMPTVLSVTMAIGSH 302
Query: 316 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYG 375
RLS+QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK+L+EVF +D DKDTV+L G
Sbjct: 303 RLSEQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSLIEVFARDADKDTVMLLG 362
Query: 376 ARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRIS 435
ARASRVENQDAIDACIVGMLGD KEAR GITE+HFLPFNPV+KRTAITYID++G+WHR+S
Sbjct: 363 ARASRVENQDAIDACIVGMLGDPKEARDGITEVHFLPFNPVDKRTAITYIDTEGNWHRVS 422
Query: 436 KGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGL 495
KGAPEQIIELC LREDV+ KA +IIDKFADRGLRSLAVA+Q VPEK+KES GGPW FVGL
Sbjct: 423 KGAPEQIIELCKLREDVKKKALSIIDKFADRGLRSLAVAKQEVPEKSKESAGGPWTFVGL 482
Query: 496 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIK 555
LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMG+NMYPSS+LLG+ K
Sbjct: 483 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGSNMYPSSSLLGEHK 542
Query: 556 DANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG 615
D +I+ LPVDELIEKADGFAGVFPEHKYEIV++LQER HICGMTGDGVNDAPALK+ADIG
Sbjct: 543 DESIAGLPVDELIEKADGFAGVFPEHKYEIVKRLQERDHICGMTGDGVNDAPALKRADIG 602
Query: 616 IAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLL 675
IAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGF+L
Sbjct: 603 IAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 662
Query: 676 IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGTYLAV 735
+ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPD+WKL+EIF TGIVLGTYLAV
Sbjct: 663 LALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLREIFVTGIVLGTYLAV 722
Query: 736 MTVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLER 795
MTV+FFWA H+S FFS+KFGVRSIR++ ELTAAVYLQVSIVSQALIFVTRSRSWS++ER
Sbjct: 723 MTVIFFWAAHASDFFSDKFGVRSIRENYSELTAAVYLQVSIVSQALIFVTRSRSWSYVER 782
Query: 796 PGLLLIAAFIIAQLVATLIAVYANFGFARIHGIGWGWVGVIWLYSIVFYIPLDVLKFIVR 855
PG+ L+ AF IAQL+ATLIAVYAN+GFA++ GIGWGW GVIWLYSIVFYIP+D+LKFI+R
Sbjct: 783 PGMFLLVAFFIAQLIATLIAVYANWGFAKMKGIGWGWAGVIWLYSIVFYIPMDILKFIIR 842
Query: 856 YALTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQRTLHGLHPPETSELLNDKNNYRE 915
YALTGKAW+ + EN+ AFTTKKDYG+GEREAQWA AQRTLHGL+PPET E+LN+KNNYRE
Sbjct: 843 YALTGKAWNTITENRVAFTTKKDYGKGEREAQWAAAQRTLHGLNPPETEEMLNEKNNYRE 902
Query: 916 LSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 962
LSE+AEQAK+RAEVARLRELHTLKGHVESVVKLKGLDIET+QQHYTV
Sbjct: 903 LSELAEQAKKRAEVARLRELHTLKGHVESVVKLKGLDIETMQQHYTV 949
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 962 | ||||||
| TAIR|locus:2025727 | 954 | HA9 "H(+)-ATPase 9" [Arabidops | 0.984 | 0.992 | 0.787 | 0.0 | |
| TAIR|locus:2096549 | 948 | HA8 "H(+)-ATPase 8" [Arabidops | 0.980 | 0.994 | 0.776 | 0.0 | |
| TAIR|locus:2053343 | 949 | HA6 "H(+)-ATPase 6" [Arabidops | 0.982 | 0.995 | 0.772 | 0.0 | |
| TAIR|locus:2044450 | 949 | HA1 "H(+)-ATPase 1" [Arabidops | 0.983 | 0.996 | 0.763 | 0.0 | |
| TAIR|locus:2165600 | 949 | HA3 "H(+)-ATPase 3" [Arabidops | 0.982 | 0.995 | 0.748 | 0.0 | |
| TAIR|locus:2046623 | 949 | HA5 "H(+)-ATPase 5" [Arabidops | 0.983 | 0.996 | 0.745 | 0.0 | |
| TAIR|locus:2172244 | 956 | HA11 "H(+)-ATPase 11" [Arabido | 0.982 | 0.988 | 0.725 | 0.0 | |
| TAIR|locus:2097895 | 960 | HA4 "H(+)-ATPase 4" [Arabidops | 0.982 | 0.984 | 0.722 | 0.0 | |
| TAIR|locus:2081932 | 961 | HA7 "H(+)-ATPase 7" [Arabidops | 0.978 | 0.979 | 0.647 | 0.0 | |
| TAIR|locus:2020372 | 947 | AHA10 "autoinhibited H(+)-ATPa | 0.971 | 0.987 | 0.652 | 0.0 |
| TAIR|locus:2025727 HA9 "H(+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3870 (1367.4 bits), Expect = 0., P = 0.
Identities = 746/947 (78%), Positives = 817/947 (86%)
Query: 16 SLEEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNXXXXXXXXXXXXXX 75
S ++IK E +DLE+IPI EV QL+CTREGL+++EGQ RL IFGPN
Sbjct: 8 SWDDIKNEGIDLEKIPIEEVLTQLRCTREGLTSDEGQTRLEIFGPNKLEEKKENKVLKFL 67
Query: 76 GFMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIVVLLLINSTISFIEEXXXXXXXX 135
GFMWNPLSWVME NGGG+PPDWQDFVGI VLL+INSTISFIEE
Sbjct: 68 GFMWNPLSWVMELAAIMAIALANGGGRPPDWQDFVGITVLLIINSTISFIEENNAGNAAA 127
Query: 136 XXXXXXXPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALT 195
P+TKVLRDG W EQEA+ILVPGD+ISIKLGDI+PAD RLLDGDPLKIDQSALT
Sbjct: 128 ALMAGLAPKTKVLRDGKWSEQEAAILVPGDIISIKLGDIVPADGRLLDGDPLKIDQSALT 187
Query: 196 GESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTA 255
GESLPVTK PG EV+SGSTCKQGE+EAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTA
Sbjct: 188 GESLPVTKHPGQEVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTA 247
Query: 256 IGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 315
IGNFCICSIAIGM+IEI+VMYPIQ RAYR+GIDNLLVLLIGGIPIAMPTVLSVTMAIGSH
Sbjct: 248 IGNFCICSIAIGMLIEIVVMYPIQKRAYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 307
Query: 316 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYG 375
RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK++VEVFVKD+DKD +++
Sbjct: 308 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSMVEVFVKDLDKDQLLVNA 367
Query: 376 ARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRIS 435
ARASRVENQDAIDACIVGMLGD +EAR GITE+HF PFNPV+KRTAITYID++G+WHR+S
Sbjct: 368 ARASRVENQDAIDACIVGMLGDPREAREGITEVHFFPFNPVDKRTAITYIDANGNWHRVS 427
Query: 436 KGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGL 495
KGAPEQIIELCNLRED +AH IIDKFADRGLRSLAV Q+V EK K SPG PWQF+GL
Sbjct: 428 KGAPEQIIELCNLREDASKRAHDIIDKFADRGLRSLAVGRQTVSEKDKNSPGEPWQFLGL 487
Query: 496 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIK 555
LPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAI KETGRRLGMGTNMYPSSALLGQ K
Sbjct: 488 LPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDK 547
Query: 556 DANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKXXXX 615
D +I++LPVDELIEKADGFAGVFPEHKYEIV++LQE KHICGMTGDGVNDAPALK+
Sbjct: 548 DESIASLPVDELIEKADGFAGVFPEHKYEIVKRLQEMKHICGMTGDGVNDAPALKRADIG 607
Query: 616 XXXXXXXXXXXXXXXIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLL 675
IVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIV+GF+L
Sbjct: 608 IAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVMGFML 667
Query: 676 IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGTYLAV 735
+ALIWKFDFSPFMVLI+AILNDGTIMTISKDRVKPSP+PD+WKLKEIFATG+VLGTYLAV
Sbjct: 668 LALIWKFDFSPFMVLIVAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGTYLAV 727
Query: 736 MTVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLER 795
MTV+FFWA S+ FFS KFGVRSI +PHELTAAVYLQVSIVSQALIFVTRSRSWS++ER
Sbjct: 728 MTVVFFWAAESTDFFSAKFGVRSISGNPHELTAAVYLQVSIVSQALIFVTRSRSWSYVER 787
Query: 796 PGXXXXXXXXXXQLVATLIAVYANFGFARIHXXXXXXXXXXXLYSIVFYIPLDVLKFIVR 855
PG QL+ATLIAVYAN+ FARI LYSIVFYIPLD+LKFI+R
Sbjct: 788 PGFWLISAFFMAQLIATLIAVYANWNFARIRGIGWGWAGVIWLYSIVFYIPLDILKFIIR 847
Query: 856 YALTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQRTLHGLHPPETSELLNDKNNYRE 915
Y+L+G+AWDN++ENKTAFT+KKDYG+GEREAQWA AQRTLHGL P +TS++ NDK+ YRE
Sbjct: 848 YSLSGRAWDNVIENKTAFTSKKDYGKGEREAQWAQAQRTLHGLQPAQTSDMFNDKSTYRE 907
Query: 916 LSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 962
LSEIA+QAKRRAEVARLRE HTLKGHVESVVK KGLDIE IQQHYT+
Sbjct: 908 LSEIADQAKRRAEVARLRERHTLKGHVESVVKQKGLDIEAIQQHYTL 954
|
|
| TAIR|locus:2096549 HA8 "H(+)-ATPase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3786 (1337.8 bits), Expect = 0., P = 0.
Identities = 735/947 (77%), Positives = 804/947 (84%)
Query: 16 SLEEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNXXXXXXXXXXXXXX 75
S +EIKKENVDLERIP+ EVFEQLKC++EGLS++EG KRL IFG N
Sbjct: 6 SWDEIKKENVDLERIPVEEVFEQLKCSKEGLSSDEGAKRLEIFGANKLEEKSENKFLKFL 65
Query: 76 GFMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIVVLLLINSTISFIEEXXXXXXXX 135
GFMWNPLSWVME NGGGK PDWQDF+GI+VLL+INSTISFIEE
Sbjct: 66 GFMWNPLSWVMESAAIMAIVLANGGGKAPDWQDFIGIMVLLIINSTISFIEENNAGNAAA 125
Query: 136 XXXXXXXPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALT 195
P+TKVLRDG W EQEASILVPGD+ISIKLGDI+PADARLL+GDPLKIDQSALT
Sbjct: 126 ALMANLAPKTKVLRDGKWGEQEASILVPGDLISIKLGDIVPADARLLEGDPLKIDQSALT 185
Query: 196 GESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTA 255
GESLP TK PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN GHFQKVLT+
Sbjct: 186 GESLPTTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTS 245
Query: 256 IGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 315
IGNFCICSI +GM+IEI++MYPIQHR YR+GIDNLLVLLIGGIPIAMPTVLSVTMAIGSH
Sbjct: 246 IGNFCICSIGLGMLIEILIMYPIQHRTYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 305
Query: 316 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYG 375
RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDK+L+EVF K+MD D+V+L
Sbjct: 306 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFPKNMDSDSVVLMA 365
Query: 376 ARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRIS 435
ARASR+ENQDAIDA IVGMLGD KEARAGITE+HFLPFNPV+KRTAITYID G WHR S
Sbjct: 366 ARASRIENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITYIDESGDWHRSS 425
Query: 436 KGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGL 495
KGAPEQIIELCNL+ + + KAH +ID FA+RGLRSL VA+Q+VPEKTKES G PW+FVGL
Sbjct: 426 KGAPEQIIELCNLQGETKRKAHEVIDGFAERGLRSLGVAQQTVPEKTKESDGSPWEFVGL 485
Query: 496 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIK 555
LPLFDPPRHDSAETIRRAL LGVNVKMITGDQLAI ETGRRLGMGTNMYPS++LLG K
Sbjct: 486 LPLFDPPRHDSAETIRRALELGVNVKMITGDQLAIGIETGRRLGMGTNMYPSTSLLGNSK 545
Query: 556 DANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKXXXX 615
D ++ +P+DELIEKADGFAGVFPEHKYEIV+KLQERKHICGMTGDGVNDAPALKK
Sbjct: 546 DESLVGIPIDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIG 605
Query: 616 XXXXXXXXXXXXXXXIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLL 675
IVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIVLGF+L
Sbjct: 606 IAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML 665
Query: 676 IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGTYLAV 735
+ALIW+FDF+PFMVLIIAILNDGTIMTISKDRVKPSPVPD+WKL EIFATG+VLGTY+A+
Sbjct: 666 VALIWRFDFAPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLNEIFATGVVLGTYMAL 725
Query: 736 MTVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLER 795
TVLFFW H + FFS+ FGVRSI+ + EL AA+YLQVSI+SQALIFVTRSRSWSF+ER
Sbjct: 726 TTVLFFWLAHDTDFFSKTFGVRSIQGNEEELMAALYLQVSIISQALIFVTRSRSWSFVER 785
Query: 796 PGXXXXXXXXXXQLVATLIAVYANFGFARIHXXXXXXXXXXXLYSIVFYIPLDVLKFIVR 855
PG QLVATLIAVYAN+GFARI +YSI+ YIPLD+LKFI+R
Sbjct: 786 PGFLLLIAFVIAQLVATLIAVYANWGFARIVGCGWGWAGGIWVYSIITYIPLDILKFIIR 845
Query: 856 YALTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQRTLHGLHPPETSELLNDKNNYRE 915
YALTGKAWDN++ KTAFTTKKDYG+GEREAQWALAQRTLHGL PPE + ND N E
Sbjct: 846 YALTGKAWDNMINQKTAFTTKKDYGKGEREAQWALAQRTLHGLPPPEA--MFNDNKN--E 901
Query: 916 LSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 962
LSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDI+TIQQHYTV
Sbjct: 902 LSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 948
|
|
| TAIR|locus:2053343 HA6 "H(+)-ATPase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3745 (1323.4 bits), Expect = 0., P = 0.
Identities = 732/948 (77%), Positives = 799/948 (84%)
Query: 15 ISLEEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNXXXXXXXXXXXXX 74
IS +EIKKENVDLE+IP++EVF+QLKC+REGLS+EEG+ RL IFG N
Sbjct: 5 ISWDEIKKENVDLEKIPVDEVFQQLKCSREGLSSEEGRNRLQIFGANKLEEKVENKFLKF 64
Query: 75 XGFMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIVVLLLINSTISFIEEXXXXXXX 134
GFMWNPLSWVME NGGG+PPDWQDFVGI LL+INSTISFIEE
Sbjct: 65 LGFMWNPLSWVMEAAAIMAIVLANGGGRPPDWQDFVGITCLLIINSTISFIEENNAGNAA 124
Query: 135 XXXXXXXXPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSAL 194
P+TKVLRDG W EQEA+ILVPGD+ISIKLGDI+PADARLL+GDPLKIDQSAL
Sbjct: 125 AALMANLAPKTKVLRDGRWGEQEAAILVPGDLISIKLGDIVPADARLLEGDPLKIDQSAL 184
Query: 195 TGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLT 254
TGESLP TK GDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN GHFQKVLT
Sbjct: 185 TGESLPATKHQGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLT 244
Query: 255 AIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 314
AIGNFCICSI IGM+IEII+MYPIQHR YR+GIDNLLVLLIGGIPIAMPTVLSVTMAIGS
Sbjct: 245 AIGNFCICSIGIGMLIEIIIMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 304
Query: 315 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILY 374
HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNL+EVF KD+DKD VIL
Sbjct: 305 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFSKDVDKDYVILL 364
Query: 375 GARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRI 434
ARASRVENQDAID IV MLGD KEARAGITE+HFLPFNPVEKRTAITYID++G WHR
Sbjct: 365 SARASRVENQDAIDTSIVNMLGDPKEARAGITEVHFLPFNPVEKRTAITYIDTNGEWHRC 424
Query: 435 SKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVG 494
SKGAPEQIIELC+L+ + + +AH IIDKFA+RGLRSL VA Q VPEK KES G PW+FVG
Sbjct: 425 SKGAPEQIIELCDLKGETKRRAHEIIDKFAERGLRSLGVARQRVPEKDKESAGTPWEFVG 484
Query: 495 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQI 554
LLPLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAI KETGRRLGMGTNMYPSS+LL +
Sbjct: 485 LLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL-EN 543
Query: 555 KDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKXXX 614
KD +PVDELIEKADGFAGVFPEHKYEIVRKLQERKHI GMTGDGVNDAPALKK
Sbjct: 544 KDDTTGGVPVDELIEKADGFAGVFPEHKYEIVRKLQERKHIVGMTGDGVNDAPALKKADI 603
Query: 615 XXXXXXXXXXXXXXXXIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFL 674
IVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGF+
Sbjct: 604 GIAVDDATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 663
Query: 675 LIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGTYLA 734
L+ALIW+FDFSPFMVLIIAILNDGTIMTISKDRVKPSP+PD+WKLKEIFATG+VLGTY+A
Sbjct: 664 LVALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPIPDSWKLKEIFATGVVLGTYMA 723
Query: 735 VMTVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLE 794
++TV+FFW H +TFFS+KFGVRS++ EL A +YLQVSI+SQALIFVTRSRSWSF+E
Sbjct: 724 LVTVVFFWLAHDTTFFSDKFGVRSLQGKDEELIAVLYLQVSIISQALIFVTRSRSWSFVE 783
Query: 795 RPGXXXXXXXXXXQLVATLIAVYANFGFARIHXXXXXXXXXXXLYSIVFYIPLDVLKFIV 854
RPG QL+ATLIA YA++ FARI +YSIV YIPLD+LKFI
Sbjct: 784 RPGLLLLIAFFVAQLIATLIATYAHWEFARIKGCGWGWCGVIWIYSIVTYIPLDILKFIT 843
Query: 855 RYALTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQRTLHGLHPPETSELLNDKNNYR 914
RY L+GKAW+N++EN+TAFTTKKDYGRGEREAQWALAQRTLHGL PPE+ + D Y
Sbjct: 844 RYTLSGKAWNNMIENRTAFTTKKDYGRGEREAQWALAQRTLHGLKPPES--MFEDTATYT 901
Query: 915 ELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 962
ELSEIAEQAK+RAEVARLRE+HTLKGHVESVVKLKGLDI+ + QHYTV
Sbjct: 902 ELSEIAEQAKKRAEVARLREVHTLKGHVESVVKLKGLDIDNLNQHYTV 949
|
|
| TAIR|locus:2044450 HA1 "H(+)-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3725 (1316.3 bits), Expect = 0., P = 0.
Identities = 722/946 (76%), Positives = 795/946 (84%)
Query: 17 LEEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNXXXXXXXXXXXXXXG 76
LE+IK E VDLE+IPI EVF+QLKCTREGL+ +EG+ R+VIFGPN G
Sbjct: 4 LEDIKNETVDLEKIPIEEVFQQLKCTREGLTTQEGEDRIVIFGPNKLEEKKESKILKFLG 63
Query: 77 FMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIVVLLLINSTISFIEEXXXXXXXXX 136
FMWNPLSWVME NG +PPDWQDFVGI+ LL+INSTISFIEE
Sbjct: 64 FMWNPLSWVMEAAALMAIALANGDNRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAA 123
Query: 137 XXXXXXPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTG 196
P+TKVLRDG W EQEA+ILVPGD++SIKLGDIIPADARLL+GDPLK+DQSALTG
Sbjct: 124 LMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTG 183
Query: 197 ESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTAI 256
ESLPVTK PG EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHFQKVLT+I
Sbjct: 184 ESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTSI 243
Query: 257 GNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 316
GNFCICSIAIG+ IEI+VMYPIQHR YR+GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 244 GNFCICSIAIGIAIEIVVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 303
Query: 317 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGA 376
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLVEVF K ++KD V+L+ A
Sbjct: 304 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAA 363
Query: 377 RASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISK 436
ASRVENQDAIDA +VGML D KEARAGI E+HFLPFNPV+KRTA+TYIDSDG+WHR+SK
Sbjct: 364 MASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRVSK 423
Query: 437 GAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLL 496
GAPEQI++L N R D+R K + IDK+A+RGLRSLAVA Q VPEKTKESPGGPW+FVGLL
Sbjct: 424 GAPEQILDLANARPDLRKKVLSCIDKYAERGLRSLAVARQVVPEKTKESPGGPWEFVGLL 483
Query: 497 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKD 556
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPS+ALLG KD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSAALLGTDKD 543
Query: 557 ANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKXXXXX 616
+NI+++PV+ELIEKADGFAGVFPEHKYEIV+KLQERKHI GMTGDGVNDAPALKK
Sbjct: 544 SNIASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGI 603
Query: 617 XXXXXXXXXXXXXXIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLI 676
IVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV GF+LI
Sbjct: 604 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLI 663
Query: 677 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGTYLAVM 736
ALIW+FDFS FMVLIIAILNDGTIMTISKDRVKPSP PD+WKLKEIFATGIVLG Y A+M
Sbjct: 664 ALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGIVLGGYQAIM 723
Query: 737 TVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLERP 796
+V+FFWA H + FFS+KFGVRSIRD+ EL AVYLQVSI+SQALIFVTRSRSWSF+ERP
Sbjct: 724 SVIFFWAAHKTDFFSDKFGVRSIRDNNDELMGAVYLQVSIISQALIFVTRSRSWSFVERP 783
Query: 797 GXXXXXXXXXXQLVATLIAVYANFGFARIHXXXXXXXXXXXLYSIVFYIPLDVLKFIVRY 856
G QLVATLIAVYA++ FA++ +YSIV Y P D+LKF +RY
Sbjct: 784 GALLMIAFVIAQLVATLIAVYADWTFAKVKGIGWGWAGVIWIYSIVTYFPQDILKFAIRY 843
Query: 857 ALTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQRTLHGLHPPETSELLNDKNNYREL 916
L+GKAW +L +N+TAFTTKKDYG GEREAQWA AQRTLHGL P E + +K +YREL
Sbjct: 844 ILSGKAWASLFDNRTAFTTKKDYGIGEREAQWAQAQRTLHGLQPKEDVNIFPEKGSYREL 903
Query: 917 SEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 962
SEIAEQAKRRAE+ARLRELHTLKGHVESV KLKGLDI+T HYTV
Sbjct: 904 SEIAEQAKRRAEIARLRELHTLKGHVESVAKLKGLDIDTAGHHYTV 949
|
|
| TAIR|locus:2165600 HA3 "H(+)-ATPase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3672 (1297.7 bits), Expect = 0., P = 0.
Identities = 708/946 (74%), Positives = 792/946 (83%)
Query: 17 LEEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNXXXXXXXXXXXXXXG 76
LE+I ENVDLE+IPI EVF+QLKC+REGLS EG+ RL IFGPN G
Sbjct: 5 LEDIVNENVDLEKIPIEEVFQQLKCSREGLSGAEGENRLQIFGPNKLEEKKESKLLKFLG 64
Query: 77 FMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIVVLLLINSTISFIEEXXXXXXXXX 136
FMWNPLSWVME NGGGKPPDWQDFVGIV LL+INSTISF+EE
Sbjct: 65 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVCLLVINSTISFVEENNAGNAAAA 124
Query: 137 XXXXXXPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTG 196
P+TKVLRDG W EQEASILVPGD++SIKLGDIIPADARLL+GDPLK+DQSALTG
Sbjct: 125 LMAGLAPKTKVLRDGKWSEQEASILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTG 184
Query: 197 ESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTAI 256
ESLP TK PG+EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHFQKVLTAI
Sbjct: 185 ESLPATKGPGEEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 244
Query: 257 GNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 316
GNFCICSIA+G+ IEI+VMYPIQ R YR+GIDNLLVLLIGGIPIAMPTVLSVTMAIGSH+
Sbjct: 245 GNFCICSIAVGIAIEIVVMYPIQRRHYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHK 304
Query: 317 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGA 376
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNL+EV+ K ++KD V+L+ A
Sbjct: 305 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVYCKGVEKDEVLLFAA 364
Query: 377 RASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISK 436
RASRVENQDAIDA +VGML D KEARAGI E+HFLPFNPV+KRTA+T+IDS+G+WHR+SK
Sbjct: 365 RASRVENQDAIDAAMVGMLADPKEARAGIREIHFLPFNPVDKRTALTFIDSNGNWHRVSK 424
Query: 437 GAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLL 496
GAPEQI++LCN R D+R + H+ IDK+A+RGLRSLAV+ Q+VPEKTKES G PW+FVG+L
Sbjct: 425 GAPEQILDLCNARADLRKRVHSTIDKYAERGLRSLAVSRQTVPEKTKESSGSPWEFVGVL 484
Query: 497 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKD 556
PLFDPPRHDSAETIRRAL+LGVNVKMITGDQLAIAKETGRRLGMG+NMYPSS+LLG+ KD
Sbjct: 485 PLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIAKETGRRLGMGSNMYPSSSLLGKHKD 544
Query: 557 ANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKXXXXX 616
++ +PV++LIEKADGFAGVFPEHKYEIV+KLQERKHICGMTGDGVNDAPALKK
Sbjct: 545 EAMAHIPVEDLIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGI 604
Query: 617 XXXXXXXXXXXXXXIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLI 676
IVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV GF+LI
Sbjct: 605 AVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLI 664
Query: 677 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGTYLAVM 736
ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSP PD+WKLKEIFATG+VLG Y+A+M
Sbjct: 665 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYMAIM 724
Query: 737 TVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLERP 796
TV+FFWA + + FF F VR +R S HE+ +A+YLQVSIVSQALIFVTRSRSWSF ERP
Sbjct: 725 TVVFFWAAYKTDFFPRTFHVRDLRGSEHEMMSALYLQVSIVSQALIFVTRSRSWSFTERP 784
Query: 797 GXXXXXXXXXXQLVATLIAVYANFGFARIHXXXXXXXXXXXLYSIVFYIPLDVLKFIVRY 856
G QL+AT IAVY N+ FARI LYSIVFY PLD++KF +RY
Sbjct: 785 GYFLLIAFWVAQLIATAIAVYGNWEFARIKGIGWGWAGVIWLYSIVFYFPLDIMKFAIRY 844
Query: 857 ALTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQRTLHGLHPPETSELLNDKNNYREL 916
L G AW N+++N+TAFTTK++YG EREAQWA AQRTLHGL ET+ ++ ++ YREL
Sbjct: 845 ILAGTAWKNIIDNRTAFTTKQNYGIEEREAQWAHAQRTLHGLQNTETANVVPERGGYREL 904
Query: 917 SEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 962
SEIA QAKRRAE+ARLRELHTLKGHVESVVKLKGLDIET HYTV
Sbjct: 905 SEIANQAKRRAEIARLRELHTLKGHVESVVKLKGLDIETAG-HYTV 949
|
|
| TAIR|locus:2046623 HA5 "H(+)-ATPase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3651 (1290.3 bits), Expect = 0., P = 0.
Identities = 705/946 (74%), Positives = 781/946 (82%)
Query: 17 LEEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNXXXXXXXXXXXXXXG 76
L+ IK E+VDL RIP+ EVFE+LKCT++GL+ E RL +FGPN G
Sbjct: 4 LDHIKNESVDLVRIPMEEVFEELKCTKQGLTANEASHRLDVFGPNKLEEKKESKLLKFLG 63
Query: 77 FMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIVVLLLINSTISFIEEXXXXXXXXX 136
FMWNPLSWVME NGGG+PPDWQDFVGIV LLLINSTISFIEE
Sbjct: 64 FMWNPLSWVMEVAALMAIALANGGGRPPDWQDFVGIVCLLLINSTISFIEENNAGNAAAA 123
Query: 137 XXXXXXPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTG 196
P+TKVLRD W EQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQS+LTG
Sbjct: 124 LMAGLAPKTKVLRDNQWSEQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSSLTG 183
Query: 197 ESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTAI 256
ES+PVTK P DEVFSGS CKQGEIEA+VIATGVHTFFGKAAHLVD+TNQ GHFQKVLT+I
Sbjct: 184 ESIPVTKNPSDEVFSGSICKQGEIEAIVIATGVHTFFGKAAHLVDNTNQIGHFQKVLTSI 243
Query: 257 GNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 316
GNFCICSIA+G+++E++VMYPIQ R YR+GIDNLLVLLIGGIPIAMP+VLSVTMA GSHR
Sbjct: 244 GNFCICSIALGIIVELLVMYPIQRRRYRDGIDNLLVLLIGGIPIAMPSVLSVTMATGSHR 303
Query: 317 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGA 376
L QQGAITKRMTAIEEMAGMDVLC DKTGTLTLNKLTVDKNLVEVF K + K+ V L A
Sbjct: 304 LFQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNKLTVDKNLVEVFAKGVGKEHVFLLAA 363
Query: 377 RASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISK 436
RASR+ENQDAIDA IVGML D KEARAG+ E+HF PFNPV+KRTA+TY+DSDG+WHR SK
Sbjct: 364 RASRIENQDAIDAAIVGMLADPKEARAGVREVHFFPFNPVDKRTALTYVDSDGNWHRASK 423
Query: 437 GAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLL 496
GAPEQI+ LCN +EDVR K H +IDKFA+RGLRSLAVA Q V EK K++PGGPWQ VGLL
Sbjct: 424 GAPEQILNLCNCKEDVRRKVHGVIDKFAERGLRSLAVARQEVLEKKKDAPGGPWQLVGLL 483
Query: 497 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKD 556
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSALLGQ+KD
Sbjct: 484 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQVKD 543
Query: 557 ANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKXXXXX 616
+++ ALPVDELIEKADGFAGVFPEHKYEIV +LQ+R HICGMTGDGVNDAPALKK
Sbjct: 544 SSLGALPVDELIEKADGFAGVFPEHKYEIVHRLQQRNHICGMTGDGVNDAPALKKADIGI 603
Query: 617 XXXXXXXXXXXXXXIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLI 676
IVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV GF+ I
Sbjct: 604 AVVDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFI 663
Query: 677 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGTYLAVM 736
ALIW+FDFSPFMVLIIAILNDGTIMTISKDR+KPSP PD+WKL++IF+TG+VLG Y A+M
Sbjct: 664 ALIWQFDFSPFMVLIIAILNDGTIMTISKDRMKPSPQPDSWKLRDIFSTGVVLGGYQALM 723
Query: 737 TVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLERP 796
TV+FFW + S FFS FGVR + P ++ AA+YLQVSI+SQALIFVTRSRSWS+ E P
Sbjct: 724 TVVFFWVMKDSDFFSNYFGVRPLSQRPEQMMAALYLQVSIISQALIFVTRSRSWSYAECP 783
Query: 797 GXXXXXXXXXXQLVATLIAVYANFGFARIHXXXXXXXXXXXLYSIVFYIPLDVLKFIVRY 856
G QLVAT IAVYAN+ FARI LYS + YIPLD+LKF +RY
Sbjct: 784 GLLLLGAFVIAQLVATFIAVYANWSFARIEGAGWGWAGVIWLYSFLTYIPLDLLKFGIRY 843
Query: 857 ALTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQRTLHGLHPPETSELLNDKNNYREL 916
L+GKAW NLLENKTAFTTKKDYG+ EREAQWA AQRTLHGL P E + + N+KN+Y EL
Sbjct: 844 VLSGKAWLNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPAEKNNIFNEKNSYSEL 903
Query: 917 SEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 962
S+IAEQAKRRAEV RLRE++TLKGHVESVVKLKGLDI+TIQQHYTV
Sbjct: 904 SQIAEQAKRRAEVVRLREINTLKGHVESVVKLKGLDIDTIQQHYTV 949
|
|
| TAIR|locus:2172244 HA11 "H(+)-ATPase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3595 (1270.6 bits), Expect = 0., P = 0.
Identities = 689/950 (72%), Positives = 785/950 (82%)
Query: 17 LEEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNXXXXXXXXXXXXXXG 76
LE + KE VDLE +PI EVFE L+C+REGL+ E +RL +FG N G
Sbjct: 8 LEAVLKETVDLENVPIEEVFESLRCSREGLTTEAADERLALFGHNKLEEKKESKFLKFLG 67
Query: 77 FMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIVVLLLINSTISFIEEXXXXXXXXX 136
FMWNPLSWVME NGGGKPPDWQDFVGI+ LL+INSTISFIEE
Sbjct: 68 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAA 127
Query: 137 XXXXXXPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTG 196
P+ KVLRDG W EQ+A+ILVPGD+ISIKLGDI+PADARLL+GDPLKIDQS+LTG
Sbjct: 128 LMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQSSLTG 187
Query: 197 ESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTAI 256
ESLPVTK PGD V+SGSTCKQGE+EAVVIATGVHTFFGKAAHLVD+TN GHFQ+VLTAI
Sbjct: 188 ESLPVTKGPGDGVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDTTNHVGHFQQVLTAI 247
Query: 257 GNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 316
GNFCICSIA+GM+IEI+VMYPIQHRAYR GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 248 GNFCICSIAVGMIIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307
Query: 317 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGA 376
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNL+EVF K +D DTV+L A
Sbjct: 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTKGVDADTVVLMAA 367
Query: 377 RASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISK 436
+ASR+ENQDAIDA IVGML D KEARAG+ E+HFLPFNP +KRTA+TYIDSDG HR+SK
Sbjct: 368 QASRLENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPTDKRTALTYIDSDGKMHRVSK 427
Query: 437 GAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLL 496
GAPEQI+ L + R ++ + H +IDKFA+RGLRSLAVA Q VPE TKES GGPWQF+GL+
Sbjct: 428 GAPEQILNLAHNRAEIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKESAGGPWQFMGLM 487
Query: 497 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKD 556
PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSALLGQ KD
Sbjct: 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQHKD 547
Query: 557 ANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKXXXXX 616
+I ALP+D+LIEKADGFAGVFPEHKYEIV++LQ RKHICGMTGDGVNDAPALKK
Sbjct: 548 ESIGALPIDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607
Query: 617 XXXXXXXXXXXXXXIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLI 676
IVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIVLGF+L+
Sbjct: 608 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLL 667
Query: 677 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGTYLAVM 736
ALIWKFDF PFMVLIIAILNDGTIMTISKDRVKPSP+PD+WKL EIFATG+V G+Y+A+M
Sbjct: 668 ALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVFGSYMAMM 727
Query: 737 TVLFFWAIHSSTFFSEKFGVRSIRDSPHE----LTAAVYLQVSIVSQALIFVTRSRSWSF 792
TV+FFWA + + FF FGV ++ + H+ L +A+YLQVSI+SQALIFVTRSRSWS+
Sbjct: 728 TVIFFWAAYKTDFFPRTFGVSTLEKTAHDDFRKLASAIYLQVSIISQALIFVTRSRSWSY 787
Query: 793 LERPGXXXXXXXXXXQLVATLIAVYANFGFARIHXXXXXXXXXXXLYSIVFYIPLDVLKF 852
+ERPG QLVATLIAVYAN+ FA I LY+IVFYIPLD++KF
Sbjct: 788 VERPGMLLVVAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIVFYIPLDIIKF 847
Query: 853 IVRYALTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQRTLHGLHPPETSELLNDKNN 912
++RYAL+G+AWD ++E + AFT +KD+G+ +RE QWA AQRTLHGL P+ +++ ++ +
Sbjct: 848 LIRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPD-AKMFPERTH 906
Query: 913 YRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 962
+ ELS++AE+AKRRAE+ARLRELHTLKGHVESVV+LKGLDIETIQQ YTV
Sbjct: 907 FNELSQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 956
|
|
| TAIR|locus:2097895 HA4 "H(+)-ATPase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3562 (1258.9 bits), Expect = 0., P = 0.
Identities = 686/950 (72%), Positives = 782/950 (82%)
Query: 17 LEEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNXXXXXXXXXXXXXXG 76
LE + KE VDLE +PI EVFE L+C++EGL+ + +RL +FG N G
Sbjct: 12 LEAVLKEAVDLENVPIEEVFENLRCSKEGLTTQAADERLALFGHNKLEEKKESKFLKFLG 71
Query: 77 FMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIVVLLLINSTISFIEEXXXXXXXXX 136
FMWNPLSWVME NGGGKPPDWQDFVGI+ LL+INSTISFIEE
Sbjct: 72 FMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIEENNAGNAAAA 131
Query: 137 XXXXXXPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTG 196
P+ KVLRDG W EQ+A+ILVPGD+ISIKLGDI+PADARLL+GDPLKIDQSALTG
Sbjct: 132 LMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQSALTG 191
Query: 197 ESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTAI 256
ESLPVTK GD V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVD+TNQ GHFQ+VLTAI
Sbjct: 192 ESLPVTKSSGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQIGHFQQVLTAI 251
Query: 257 GNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 316
GNFCICSIA+GM+IEI+VMYPIQHRAYR GIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 252 GNFCICSIAVGMLIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 311
Query: 317 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGA 376
LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNL+EVF+K +D DTV+L A
Sbjct: 312 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFMKGVDADTVVLMAA 371
Query: 377 RASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISK 436
RASR+ENQDAIDA IVGML D K+ARAGI E+HFLPFNP +KRTA+TYID++G+ HR+SK
Sbjct: 372 RASRLENQDAIDAAIVGMLADPKDARAGIQEVHFLPFNPTDKRTALTYIDNEGNTHRVSK 431
Query: 437 GAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLL 496
GAPEQI+ L + + ++ + H +IDKFA+RGLRSLAVA Q VPE K+S GGPWQFVGL+
Sbjct: 432 GAPEQILNLAHNKSEIERRVHAVIDKFAERGLRSLAVAYQDVPEGRKDSAGGPWQFVGLM 491
Query: 497 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKD 556
PLFDPPRHDSAETIRRALNLGV+VKMITGDQLAI KETGRRLGMGTNMYPSSALLGQ KD
Sbjct: 492 PLFDPPRHDSAETIRRALNLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKD 551
Query: 557 ANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKXXXXX 616
+I ALPVDELIEKADGFAGVFPEHKYEIV++LQ RKHICGMTGDGVNDAPALKK
Sbjct: 552 ESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 611
Query: 617 XXXXXXXXXXXXXXIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLI 676
IVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIVLGF+L+
Sbjct: 612 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLL 671
Query: 677 ALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGTYLAVM 736
ALIW+FDF PFMVLIIAILNDGTIMTISKDRVKPSP+PD+WKL EIFATG+V G+Y+A+M
Sbjct: 672 ALIWQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFATGVVFGSYMAMM 731
Query: 737 TVLFFWAIHSSTFFSEKFGVRSIRDSPHE----LTAAVYLQVSIVSQALIFVTRSRSWSF 792
TV+FFW + + FF FGV ++ + H+ L +A+YLQVSI+SQALIFVTRSRSWSF
Sbjct: 732 TVIFFWVSYKTDFFPRTFGVATLEKTAHDDFRKLASAIYLQVSIISQALIFVTRSRSWSF 791
Query: 793 LERPGXXXXXXXXXXQLVATLIAVYANFGFARIHXXXXXXXXXXXLYSIVFYIPLDVLKF 852
+ERPG QLVATLIAVYAN+ FA I LY+I+FYIPLD +KF
Sbjct: 792 VERPGIFLMIAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYNIIFYIPLDFIKF 851
Query: 853 IVRYALTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQRTLHGLHPPETSELLNDKNN 912
+RYAL+G+AWD ++E + AFT +KD+G+ +RE QWA AQRTLHGL P+T ++ D+ +
Sbjct: 852 FIRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDT-KMFTDRTH 910
Query: 913 YRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 962
EL+++AE+AKRRAE+ARLRELHTLKGHVESVV+LKGLDIETIQQ YTV
Sbjct: 911 VSELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 960
|
|
| TAIR|locus:2081932 HA7 "H(+)-ATPase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3166 (1119.5 bits), Expect = 0., P = 0.
Identities = 623/962 (64%), Positives = 740/962 (76%)
Query: 16 SLEEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNXXXXXXXXXXXXXX 75
+L+ I E++DLE +P+ EVF+ LKCT+EGL++ E Q+RL +FG N
Sbjct: 6 ALKAITTESIDLENVPVEEVFQHLKCTKEGLTSNEVQERLTLFGYNKLEEKKESKILKFL 65
Query: 76 GFMWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIVVLLLINSTISFIEEXXXXXXXX 135
GFMWNPLSWVME +GGGKP D+ DFVGIVVLLLINSTISF+EE
Sbjct: 66 GFMWNPLSWVMEAAALMAIGLAHGGGKPADYHDFVGIVVLLLINSTISFVEENNAGNAAA 125
Query: 136 XXXXXXXPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALT 195
P+ K +RDG W E +A+ LVPGD++SIKLGDIIPADARLL+GDPLKIDQ+ LT
Sbjct: 126 ALMAQLAPKAKAVRDGKWNEIDAAELVPGDIVSIKLGDIIPADARLLEGDPLKIDQATLT 185
Query: 196 GESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTA 255
GESLPVTK PG V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST GHFQKVLTA
Sbjct: 186 GESLPVTKNPGASVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTTHVGHFQKVLTA 245
Query: 256 IGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 315
IGNFCICSIA+GM IEI+V+Y +Q R YR GIDNLLVLLIGGIPIAMPTVLSVTMAIG+H
Sbjct: 246 IGNFCICSIAVGMAIEIVVIYGLQKRGYRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGAH 305
Query: 316 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYG 375
RL+QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNL+EVF + +D+D +L
Sbjct: 306 RLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFKRGIDRDMAVLMA 365
Query: 376 ARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRIS 435
ARA+R+ENQDAID IV ML D KEARAGI ELHFLPF+P +RTA+TY+D +G HR+S
Sbjct: 366 ARAARLENQDAIDTAIVSMLSDPKEARAGIKELHFLPFSPANRRTALTYLDGEGKMHRVS 425
Query: 436 KGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGL 495
KGAPE+I+++ + + +++ K H IDKFA+RGLRSL +A Q VP+ + GGPW FV L
Sbjct: 426 KGAPEEILDMAHNKLEIKEKVHATIDKFAERGLRSLGLAYQEVPDGDVKGEGGPWDFVAL 485
Query: 496 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIK 555
LPLFDPPRHDSA+TI RAL+LGV+VKMITGDQLAIAKETGRRLGMGTNMYPSS+LL
Sbjct: 486 LPLFDPPRHDSAQTIERALHLGVSVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLS--- 542
Query: 556 DANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKXXXX 615
D N + VDELIE ADGFAGVFPEHKYEIV++LQ RKHICGMTGDGVNDAPALKK
Sbjct: 543 DNNTEGVSVDELIENADGFAGVFPEHKYEIVKRLQSRKHICGMTGDGVNDAPALKKADIG 602
Query: 616 XXXXXXXXXXXXXXXIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLL 675
IVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV+GF+L
Sbjct: 603 IAVDDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVMGFML 662
Query: 676 IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGTYLAV 735
+ + W+FDF PFMVL+IAILNDGTIMTISKDRVKPSP PD WKLKEIFATG+VLG YLA+
Sbjct: 663 LCVFWEFDFPPFMVLVIAILNDGTIMTISKDRVKPSPTPDCWKLKEIFATGVVLGAYLAI 722
Query: 736 MTVLFFWAIHSSTFFSEKFGVRS-------IRD---SPH---ELTAAVYLQVSIVSQALI 782
MTV+FFWA + + FF F VR+ ++D + H ++ +AVYLQVS +SQALI
Sbjct: 723 MTVVFFWAAYETNFFHNIFHVRNFNQHHFKMKDKKVAAHLNEQMASAVYLQVSTISQALI 782
Query: 783 FVTRSRSWSFLERPGXXXXXXXXXXQLVATLIAVYANFGFARIHXXXXXXXXXXXLYSIV 842
FVTRSRSWSF+ERPG QLVA++I+ AN+ FA I +++IV
Sbjct: 783 FVTRSRSWSFVERPGFLLVIAFLIAQLVASVISAMANWPFAGIRSIGWGWTGVIWIFNIV 842
Query: 843 FYIPLDVLKFIVRYALTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQRTLHGLHPPE 902
Y+ LD +KF+VRYAL+GK+WD ++E +TA T KK++G+ ER A WA +RT HGL E
Sbjct: 843 TYMLLDPIKFLVRYALSGKSWDRMVEGRTALTGKKNFGQEERMAAWATEKRTQHGL---E 899
Query: 903 TSEL-LNDKNNYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQH-Y 960
T + + ++N+ EL+ +AE+AKRRAE+AR+REL TLKG VES KLKG D+E + Y
Sbjct: 900 TGQKPVYERNSATELNNMAEEAKRRAEIARMRELQTLKGKVESAAKLKGYDLEDPNSNNY 959
Query: 961 TV 962
T+
Sbjct: 960 TI 961
|
|
| TAIR|locus:2020372 AHA10 "autoinhibited H(+)-ATPase isoform 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3158 (1116.7 bits), Expect = 0., P = 0.
Identities = 617/945 (65%), Positives = 732/945 (77%)
Query: 18 EEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNXXXXXXXXXXXXXXGF 77
+ ++ +DL +P+ EVFE L+ + +GL + + ++RL IFGPN GF
Sbjct: 13 DTFNRKGIDLGILPLEEVFEYLRTSPQGLLSGDAEERLKIFGPNRLEEKQENRFVKFLGF 72
Query: 78 MWNPLSWVMEXXXXXXXXXXNGGGKPPDWQDFVGIVVLLLINSTISFIEEXXXXXXXXXX 137
MWNPLSWVME N PDW+DF GIV LLLIN+TISF EE
Sbjct: 73 MWNPLSWVMEAAALMAIALANSQSLGPDWEDFTGIVCLLLINATISFFEENNAGNAAAAL 132
Query: 138 XXXXXPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTGE 197
+T+VLRDG W+EQ+ASILVPGD+ISIKLGDIIPADARLL+GDPLKIDQS LTGE
Sbjct: 133 MARLALKTRVLRDGQWQEQDASILVPGDIISIKLGDIIPADARLLEGDPLKIDQSVLTGE 192
Query: 198 SLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTAIG 257
SLPVTK G++VFSGSTCKQGEIEAVVIATG TFFGK A LVDST+ GHFQ+VLT+IG
Sbjct: 193 SLPVTKKKGEQVFSGSTCKQGEIEAVVIATGSTTFFGKTARLVDSTDVTGHFQQVLTSIG 252
Query: 258 NFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL 317
NFCICSIA+GMV+EII+M+P+QHR+YR GI+NLLVLLIGGIPIAMPTVLSVT+AIGSHRL
Sbjct: 253 NFCICSIAVGMVLEIIIMFPVQHRSYRIGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRL 312
Query: 318 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGAR 377
SQQGAITKRMTAIEEMAGMDVLC DKTGTLTLN LTVDKNL+EVFV MDKDT++L R
Sbjct: 313 SQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNSLTVDKNLIEVFVDYMDKDTILLLAGR 372
Query: 378 ASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKG 437
ASR+ENQDAIDA IV ML D +EARA I E+HFLPFNPV+KRTAITYIDSDG W+R +KG
Sbjct: 373 ASRLENQDAIDAAIVSMLADPREARANIREIHFLPFNPVDKRTAITYIDSDGKWYRATKG 432
Query: 438 APEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLP 497
APEQ++ LC + ++ + + IID+FA++GLRSLAVA Q +PEK+ SPGGPW+F GLLP
Sbjct: 433 APEQVLNLCQQKNEIAQRVYAIIDRFAEKGLRSLAVAYQEIPEKSNNSPGGPWRFCGLLP 492
Query: 498 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDA 557
LFDPPRHDS ETI RAL+LGV VKMITGDQLAIAKETGRRLGMGTNMYPSS+LLG D
Sbjct: 493 LFDPPRHDSGETILRALSLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGHNNDE 552
Query: 558 NISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKXXXXXX 617
+ A+PVDELIE ADGFAGVFPEHKYEIV+ LQE KH+ GMTGDGVNDAPALKK
Sbjct: 553 H-EAIPVDELIEMADGFAGVFPEHKYEIVKILQEMKHVVGMTGDGVNDAPALKKADIGIA 611
Query: 618 XXXXXXXXXXXXXIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIA 677
IVLT+PGLSVI+SAVLTSRAIFQRM+NYT+YAVSITIRIVLGF L+A
Sbjct: 612 VADATDAARSSADIVLTDPGLSVIISAVLTSRAIFQRMRNYTVYAVSITIRIVLGFTLLA 671
Query: 678 LIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGTYLAVMT 737
LIW++DF PFMVLIIAILNDGTIMTISKDRV+PSP P++WKL +IFATGIV+GTYLA++T
Sbjct: 672 LIWEYDFPPFMVLIIAILNDGTIMTISKDRVRPSPTPESWKLNQIFATGIVIGTYLALVT 731
Query: 738 VLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLERPG 797
VLF+W I S+TFF + F V+SI ++ ++++A+YLQVSI+SQALIFVTRSR WSF ERPG
Sbjct: 732 VLFYWIIVSTTFFEKHFHVKSIANNSEQVSSAMYLQVSIISQALIFVTRSRGWSFFERPG 791
Query: 798 XXXXXXXXXXQLVATLIAVYANFGFARIHXXXXXXXXXXXLYSIVFYIPLDVLKFIVRYA 857
QL ATLIAVYAN FA+I LYS++FYIPLDV+KF+ YA
Sbjct: 792 TLLIFAFILAQLAATLIAVYANISFAKITGIGWRWAGVIWLYSLIFYIPLDVIKFVFHYA 851
Query: 858 LTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQRTLHGLHPPETSELLNDKNNYRELS 917
L+G+AW+ +L+ KTAFT KKDYG+ + ++QR+ EL ++ S
Sbjct: 852 LSGEAWNLVLDRKTAFTYKKDYGKDDGSPNVTISQRSR------SAEELRGSRSR---AS 902
Query: 918 EIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 962
IAEQ +RRAE+ARL E+H++ H+ESV+KLK +D I+ +TV
Sbjct: 903 WIAEQTRRRAEIARLLEVHSVSRHLESVIKLKQIDQRMIRAAHTV 947
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P19456 | PMA2_ARATH | 3, ., 6, ., 3, ., 6 | 0.8458 | 0.9833 | 0.9978 | no | no |
| P49380 | PMA1_KLULA | 3, ., 6, ., 3, ., 6 | 0.3560 | 0.8419 | 0.9010 | yes | no |
| Q9LV11 | PMA11_ARATH | 3, ., 6, ., 3, ., 6 | 0.7989 | 0.9823 | 0.9884 | no | no |
| P19657 | PMA2_YEAST | 3, ., 6, ., 3, ., 6 | 0.3658 | 0.8004 | 0.8130 | yes | no |
| Q58623 | Y1226_METJA | 3, ., 6, ., 3, ., - | 0.4193 | 0.8076 | 0.9652 | yes | no |
| Q43128 | PMA10_ARATH | 3, ., 6, ., 3, ., 6 | 0.7185 | 0.9719 | 0.9873 | no | no |
| Q08435 | PMA1_NICPL | 3, ., 6, ., 3, ., 6 | 0.8042 | 0.9823 | 0.9874 | N/A | no |
| Q08436 | PMA3_NICPL | 3, ., 6, ., 3, ., 6 | 0.8031 | 0.9823 | 0.9884 | N/A | no |
| P83970 | PMA1_WHEAT | 3, ., 6, ., 3, ., 6 | 0.8333 | 0.9833 | 0.9947 | N/A | no |
| Q42556 | PMA9_ARATH | 3, ., 6, ., 3, ., 6 | 0.8590 | 0.9885 | 0.9968 | yes | no |
| Q03194 | PMA4_NICPL | 3, ., 6, ., 3, ., 6 | 0.8494 | 0.9875 | 0.9978 | N/A | no |
| Q9SJB3 | PMA5_ARATH | 3, ., 6, ., 3, ., 6 | 0.8192 | 0.9833 | 0.9968 | no | no |
| P09627 | PMA1_SCHPO | 3, ., 6, ., 3, ., 6 | 0.3654 | 0.8056 | 0.8433 | yes | no |
| P22180 | PMA1_SOLLC | 3, ., 6, ., 3, ., 6 | 0.8052 | 0.9823 | 0.9884 | N/A | no |
| Q9LY32 | PMA7_ARATH | 3, ., 6, ., 3, ., 6 | 0.7195 | 0.9708 | 0.9719 | no | no |
| Q9M2A0 | PMA8_ARATH | 3, ., 6, ., 3, ., 6 | 0.8447 | 0.9802 | 0.9947 | no | no |
| Q9SU58 | PMA4_ARATH | 3, ., 6, ., 3, ., 6 | 0.7916 | 0.9875 | 0.9895 | no | no |
| Q7XPY2 | PMA1_ORYSJ | 3, ., 6, ., 3, ., 6 | 0.8586 | 0.9833 | 0.9947 | yes | no |
| P20431 | PMA3_ARATH | 3, ., 6, ., 3, ., 6 | 0.8224 | 0.9823 | 0.9957 | no | no |
| P20649 | PMA1_ARATH | 3, ., 6, ., 3, ., 6 | 0.8382 | 0.9833 | 0.9968 | no | no |
| P23980 | PMA2_SOLLC | 3, ., 6, ., 3, ., 6 | 0.7886 | 0.7276 | 0.9943 | N/A | no |
| Q9SH76 | PMA6_ARATH | 3, ., 6, ., 3, ., 6 | 0.8407 | 0.9823 | 0.9957 | no | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 962 | |||
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-179 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-114 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 3e-90 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 7e-84 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 1e-73 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 8e-72 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 6e-66 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 9e-66 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 4e-62 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 8e-62 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 3e-56 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 2e-53 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 6e-49 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 4e-42 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 8e-37 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 5e-35 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 1e-33 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 2e-33 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 3e-31 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 2e-30 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 2e-30 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 4e-29 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 3e-19 | |
| smart00831 | 75 | smart00831, Cation_ATPase_N, Cation transporter/AT | 7e-17 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 6e-16 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 1e-14 | |
| pfam00690 | 69 | pfam00690, Cation_ATPase_N, Cation transporter/ATP | 1e-12 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 8e-08 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 1e-07 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 2e-07 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 6e-04 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 8e-04 | |
| PRK01158 | 230 | PRK01158, PRK01158, phosphoglycolate phosphatase; | 0.001 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 1191 bits (3083), Expect = 0.0
Identities = 447/775 (57%), Positives = 560/775 (72%), Gaps = 23/775 (2%)
Query: 45 GLSNEEGQKRLVIFGPNKLEEKKESKVLKFLGFMWNPLSWVMEIAAIMAIALANGGGKPP 104
GL++ E +KRL +GPN+L EKK S +LKFLGF WNPLSWVME AAI+AIAL N
Sbjct: 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALEN------ 54
Query: 105 DWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPG 164
W DFV I+ LLL+N+TI FIEEN AGNA AL LAP+ +VLRDG W+E AS LVPG
Sbjct: 55 -WVDFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPG 113
Query: 165 DVISIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTKMPGDEVFSGSTCKQGEIEAVV 224
DV+ +K+GDI+PAD RL +GD +++DQ+ALTGESLPVTK GD +SGST KQGE EAVV
Sbjct: 114 DVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVV 173
Query: 225 IATGVHTFFGKAAHLVDSTNQE-GHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAY 283
ATG++TFFGKAA LV ST GH QK+L+ IG F I I + ++IE++V++ + ++
Sbjct: 174 TATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233
Query: 284 RNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 343
R G+ LVLL+GGIPIAMP VLSVTMA+G+ L+++ AI R+TAIEE+AGMD+LCSDK
Sbjct: 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDK 293
Query: 344 TGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVENQDAIDACIVGMLGDAKEARA 403
TGTLTLNKL++D+ L F DKD V+LY A ASR E+QDAID ++G D KEAR
Sbjct: 294 TGTLTLNKLSIDEILP--FFNGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARD 351
Query: 404 GITELHFLPFNPVEKRTAITYIDSD-GSWHRISKGAPEQIIELCNLREDVRNKAHTIIDK 462
G L F+PF+PV+KRT T D + G +++KGAP+ I++LC+ ++++ K +D+
Sbjct: 352 GYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDE 411
Query: 463 FADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKM 522
A RG R+L VA + G W F+GLLPLFDPPRHD+ ETI RA +LGV VKM
Sbjct: 412 LASRGYRALGVA--------RTDEEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463
Query: 523 ITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHK 582
+TGD LAIAKET RRLG+GTN+Y + LL + + + E++E ADGFA VFPEHK
Sbjct: 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKG-DNRDDLPSGLGEMVEDADGFAEVFPEHK 522
Query: 583 YEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIV 642
YEIV LQ+R H+ GMTGDGVNDAPALKKAD+GIAVA ATDAAR A+DIVLTEPGLSVIV
Sbjct: 523 YEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIV 582
Query: 643 SAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIALIWKFDFSPFMVLIIAILNDGTIMT 702
A+L SR IFQRMK+Y IY ++ TIRIV F L+ LI F F P MV+IIAILNDGTIMT
Sbjct: 583 DAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNFYFPPIMVVIIAILNDGTIMT 642
Query: 703 ISKDRVKPSPVPDTWKLKEIFATGIVLGTYLAVMTVLFFWAIHSSTFFSEKFGVRSIRDS 762
I+ D VKPS +P W L+E+F VLG YL + T L +TFF +KFG++ +
Sbjct: 643 IAYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTTFFIDKFGLQLLHG- 701
Query: 763 PHELTAAVYLQVSIVSQALIFVTRSRSWSFLERPGLLLIAAFIIAQLVATLIAVY 817
L + +YLQVSI A IFVTR+ + + ERPG LL AF+IAQ++AT IAVY
Sbjct: 702 --NLQSFIYLQVSISGHATIFVTRTHGFFWSERPGKLLFGAFVIAQIIATFIAVY 754
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 544 bits (1404), Expect = e-179
Identities = 268/925 (28%), Positives = 434/925 (46%), Gaps = 90/925 (9%)
Query: 5 NNNNNNNNNGISLEEIKKENVDLERIPINEVFEQLKCT-REGLSNEEGQKRLVIFGPNKL 63
N N + N S + E + NE+ +L + GLS EE ++RL +GPN+L
Sbjct: 3 TNLANFSVNKSSSTPVTSETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNEL 62
Query: 64 -EEKKESKVLKFLGFMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTI 122
EEKK S + KFL +P ++ +AA+++ + G D + I+++++IN+ +
Sbjct: 63 PEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFV---GDWVDAGVDAIVILLVVVINALL 119
Query: 123 SFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLL 182
F++E A A AL +P+ KVLRDG + E AS LVPGD++ ++ GD++PAD RLL
Sbjct: 120 GFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLL 179
Query: 183 DGDPLKIDQSALTGESLPVTKMPGDE--------------VFSGSTCKQGEIEAVVIATG 228
+ L++D+SALTGESLPV K +FSG+T G + +V+ATG
Sbjct: 180 ESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATG 239
Query: 229 VHTFFGKAAHLVDSTNQ-EGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGI 287
T FGK A L+ + + + Q+ L +G F + +A+ + + V+ + NG+
Sbjct: 240 FETEFGKIARLLPTKKEVKTPLQRKLNKLGKF-LLVLALVLGALVFVVGLFRG---GNGL 295
Query: 288 DNL----LVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 343
L L + +P +P V+++ +A+G+ R+++ AI + + AIE + +DV+CSDK
Sbjct: 296 LESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDK 355
Query: 344 TGTLTLNKLTV--------DKNLVEVFVKDMDK-DTVILYGARASRVE--------NQDA 386
TGTLT NK+TV K++ + +KD +L A + V D
Sbjct: 356 TGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDP 415
Query: 387 IDACIV------GMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPE 440
+ +V G D L +PF+ KR ++ +G + KGAPE
Sbjct: 416 TEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPE 475
Query: 441 QIIELC-------NLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQ-- 491
I+E C L E+ + + A GLR LAVA + + K+ +
Sbjct: 476 VILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESD 535
Query: 492 --FVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 549
F+GL + DPPR D E I G+ V MITGD + A + G+ +
Sbjct: 536 LVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALV 595
Query: 550 LLGQIKDANISALPVDEL---IEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDA 606
+ G A + AL +EL +E+ FA V PE K IV LQ+ H+ MTGDGVNDA
Sbjct: 596 IDG----AELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDA 651
Query: 607 PALKKADIGIAVAD-ATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSI 665
PALK AD+GIA+ TDAA+ A+DIVL + + IV AV+ R ++ +K + +Y +S
Sbjct: 652 PALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSK 711
Query: 666 TIRIVLGFLL--IALIWKFDFSPFMVLIIAILNDGTI---MTISK---DRVKPSPVPDT- 716
+ VL L+ + ++ +P +L I +L D + + D +K P
Sbjct: 712 NVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEE 771
Query: 717 --WKLKEIFATGIVLGTYLAVMTVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQV 774
+ K + +++G A++ + + ++ F + G+ L + +
Sbjct: 772 GLFNRKIFWRFILIIGLLSAILF-ILTFLLYLLGFIANTLGLDLF---QALLQTTAFTVL 827
Query: 775 SIVSQALIFVTRSRS---WSFLERPGLLLIAAFIIAQLVATLIAVYANFGFARIHGIGWG 831
++ L RSR S L L A ++ ++ LI ++ +I
Sbjct: 828 VLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLI-IFLPPLNLKIFQP-TP 885
Query: 832 WVGVIWLYSIVFYIPLDVLKFIVRY 856
WL +I + L + Y
Sbjct: 886 LSLFEWLIAIAVALLLLYIVVSELY 910
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 360 bits (927), Expect = e-114
Identities = 191/594 (32%), Positives = 286/594 (48%), Gaps = 81/594 (13%)
Query: 112 IVVLLLINSTISFIEENNAGNAAAALMAGLAPQTK--VLRDGAWREQEASILVPGDVISI 169
I+ L+L+ + ++ A + +L L VLR+G W+E A LVPGDV+ +
Sbjct: 2 ILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNG-WKEIPAKDLVPGDVVLV 60
Query: 170 KLGDIIPADARLLDGDPLKIDQSALTGESLPVTK----------MPGDEVFSGSTCKQGE 219
K G+ +PAD LL G +D+S LTGES PV K + GD VF+G+ G
Sbjct: 61 KSGETVPADGVLLSGS-CFVDESNLTGESNPVLKTALKETQSGTITGDLVFAGTYVFGGT 119
Query: 220 IEAVVIATGVHTFFGKAAHLVDSTNQE-GHFQKVLTAIGNFCICSIAIGMVIEIIVMYPI 278
+ VV TG+ T G+ A +V + + Q + NF I +++ + V +
Sbjct: 120 LIVVVTPTGILTTVGRIAVVVKTGFETRTPLQSKRDRLENFIF--ILFLLLLALAVFLYL 177
Query: 279 QHRAYRNG-----IDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEM 333
R + + L++L+ +P A+P ++V +A+G RL+++G + + + A+EE+
Sbjct: 178 FIRGWDPNSIFKALLRALIVLVIVVPPALPAAVTVALAVGDARLAKKGILVRNLNALEEL 237
Query: 334 AGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVENQDAIDACIV- 392
+D LCSDKTGTLT NK+T+ V + D + ++ D ++ ++
Sbjct: 238 GKVDYLCSDKTGTLTKNKMTLQG--VYIDGGKEDNSSSLVACDNNYLSG--DPMEKALLK 293
Query: 393 --GMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNLRE 450
++G A + L PF+ V KR ++ DGS KGAPE I+E C
Sbjct: 294 SAELVGKADKGNKEYKILDVFPFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERC---- 349
Query: 451 DVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPRHDSAETI 510
N + A +GLR LA A + + +F+GL+ DP R D+ ETI
Sbjct: 350 ---NNYEEKYLELARQGLRVLAFASKELE--------DDLEFLGLITFEDPLRPDAKETI 398
Query: 511 RRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEK 570
G+ V MITGD + AK + LG+
Sbjct: 399 EELKAAGIKVVMITGDNVLTAKAIAKELGI------------------------------ 428
Query: 571 ADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASD 630
D FA V PE K +IV LQ++ HI MTGDGVNDAPALKKAD+GIA+ A+ A+D
Sbjct: 429 -DVFARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAM-----GAKAAAD 482
Query: 631 IVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIR-IVLGFLLIALIWKFD 683
IVL + LS IV AV R IF +K+ +A++ + I L LLI +I
Sbjct: 483 IVLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIVIILLLP 536
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 306 bits (786), Expect = 3e-90
Identities = 222/799 (27%), Positives = 376/799 (47%), Gaps = 115/799 (14%)
Query: 30 IPINEVFEQLKCTRE-GL-SNEEGQKRLVIFGPNKLE-EKKESKVLKFLG-FMWNPLSWV 85
+ + E +L+ + GL S++E R G N+ + E+ ES KFL F+ NPL +
Sbjct: 7 LSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILL 66
Query: 86 MEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQT 145
+ +A++++ + N D V I + +LI T+ F++E + + AL + P+
Sbjct: 67 LIASAVISVFMGN-------IDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPEC 119
Query: 146 KVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTK-- 203
++R+G AS LVPGD++ + +GD +PAD R+++ L ID+S LTGE+ PV+K
Sbjct: 120 HLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETTPVSKVT 179
Query: 204 ------MPGD------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ-EGHFQ 250
GD F G+ + G + +V+ TG +T FG ++ + + + Q
Sbjct: 180 APIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQ 239
Query: 251 KVLTAIGN--FCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSV 308
K + +G + IG+ I ++ Q + + + L + IP +P +++V
Sbjct: 240 KSMDLLGKQLSLVSFGVIGV---ICLVGWFQGKDWLEMFTISVSLAVAAIPEGLPIIVTV 296
Query: 309 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK--------NLVE 360
T+A+G R+S++ AI +++ ++E + ++V+CSDKTGTLT N +TV K ++
Sbjct: 297 TLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLN 356
Query: 361 VFVKDMDKDTVI----LYGARASRVEN-------------------------QDAIDACI 391
+ + ++ L+G V A+ +
Sbjct: 357 AVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELL 416
Query: 392 VGM-LGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRIS-KGAPEQIIELCN-- 447
+ L D +E + E+ PF+ K A+ + KGA EQ+++ C
Sbjct: 417 MKFGLDDLRETYIRVAEV---PFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYY 473
Query: 448 ---------LREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPL 498
L + R+ + A GLR +A A S PEK G F+GL+ +
Sbjct: 474 QKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFA--SGPEK------GQLTFLGLVGI 525
Query: 499 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDAN 558
DPPR E + + GV + MITGD A RRLGM + S ++ +
Sbjct: 526 NDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPS-KTSQSVSGEKLDAMD 584
Query: 559 ISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAV 618
L +++ K FA PEHK +IV+ LQ+R + MTGDGVNDAPALK ADIG+A+
Sbjct: 585 DQQL--SQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAM 642
Query: 619 AD-ATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIA 677
TD A+ A+D++LT+ + I+SA+ + IF +KN+ + +S ++ L + +A
Sbjct: 643 GQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSV-AALSLIALA 701
Query: 678 LIWKFD--FSPFMVLIIAILNDGT------IMTISKDRVKPSPVPDTWK------LKEIF 723
+ F + +L I IL DG + + KD ++ P P K +K+I
Sbjct: 702 TLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKIL 761
Query: 724 ATGIVLGTYLAVMTVLFFW 742
+ I+ + V T+ F
Sbjct: 762 VSAII----IVVGTLFVFV 776
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 289 bits (740), Expect = 7e-84
Identities = 213/773 (27%), Positives = 361/773 (46%), Gaps = 90/773 (11%)
Query: 35 VFEQLKCTREGLSNEEGQKRLVIFGPNKL-EEKKESKVLKFLGFMWNPLSWVMEIAAIMA 93
+ +L GL+N E +RL FGPN+ EEKK + + NP +++ A +M
Sbjct: 23 LLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYIL--AMLMG 80
Query: 94 IALANGGGKPPDWQDFVGIVVLLL---INSTISFIEENNAGNAAAALMAGLAPQTKVLR- 149
++ D V++ L + + FI+E+ A AA AL + VLR
Sbjct: 81 VSYLT--------DDLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRV 132
Query: 150 -----DGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTKM 204
+G+ E LVPGD+I + GDIIPADAR++ L I+QSALTGESLPV K
Sbjct: 133 INENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQSALTGESLPVEKF 192
Query: 205 PGDE-------------VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQK 251
D+ F G+ G +AVV+ATG T+FG A + F K
Sbjct: 193 VEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRGQTAFDK 252
Query: 252 VLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLL---IGGIPIAMPTVLSV 308
+ ++ I M++ + V+ I + ++ L L +G P +P ++S
Sbjct: 253 GVKSVSKLLIRF----MLVMVPVVLMINGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSS 308
Query: 309 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDK 368
+A G+ +S++ I K ++AI+ MD+LC+DKTGTLT +K+ ++K++ + + ++
Sbjct: 309 NLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHI-DSSGETSER 367
Query: 369 DTVILYGARASRVENQDAIDACIVGMLGD--AKEARAGITELHFLPFNPVEKRTAITYID 426
+ + + ++ +D ++ L + A++ + ++ +PF+ +R ++ +
Sbjct: 368 VLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVVVEN 427
Query: 427 SDGSWHRISKGAPEQIIELCN----------LREDVRNKAHTIIDKFADRGLRSLAVAEQ 476
I KGA E+++ +C L E +++ + + +G+R +AVA +
Sbjct: 428 RAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATK 487
Query: 477 SVP------EKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI 530
++ KT E G L DPP+ + E I G+NVK++TGD +
Sbjct: 488 TLKVGEADFTKTDEEQ---LIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIV 544
Query: 531 AKETGRRLGMGTNMYPSSALLGQIKDANISALPVDEL---IEKADGFAGVFPEHKYEIVR 587
+ +G+ N LLG A+I L +EL + K FA + P K I+
Sbjct: 545 TARICQEVGIDAN----DFLLG----ADIEELSDEELARELRKYHIFARLTPMQKSRIIG 596
Query: 588 KLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLT 647
L++ H G GDG+NDAPAL+KAD+GI+V A D A+ ASDI+L E L V+ V+
Sbjct: 597 LLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEASDIILLEKSLMVLEEGVIE 656
Query: 648 SRAIFQRMKNYTIYAVSITIRIVLGFLLIALIWKFDFSPFM------VLIIAILNDGTIM 701
R F + Y S V L+ + F PF+ +LI +L D + +
Sbjct: 657 GRNTFGNILKYLKMTASSNFGNVFSVLVASA-----FIPFLPMLSLHLLIQNLLYDFSQL 711
Query: 702 TISKDRVKPSPV--PDTWKLKEIFATGIVLGTYLAVMTVLFF----WAIHSST 748
T+ D++ + P W+ K + + +G ++ + F + ++T
Sbjct: 712 TLPWDKMDREFLKKPHQWEQKGMGRFMLCIGPVSSIFDIATFLLMWFVFSANT 764
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 261 bits (668), Expect = 1e-73
Identities = 200/703 (28%), Positives = 319/703 (45%), Gaps = 116/703 (16%)
Query: 25 VDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKKESKVLKFLGFMW----N 80
+ +P E+++ EGL+ E + G N+L +K L W N
Sbjct: 47 LKAAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHL---WVCYRN 103
Query: 81 PLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAG 140
P + ++ I ++ A D I +++ I++ ++FI+E + AA AL A
Sbjct: 104 PFNILLTILGAISYATE-------DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAM 156
Query: 141 LAPQTKVLR------DGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSAL 194
++ VLR + W E LVPGD+I + GD+IPAD R+L L + Q++L
Sbjct: 157 VSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQASL 216
Query: 195 TGESLPVTKMPGDE-------------VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD 241
TGESLPV K F G+ G +AVVIATG +T+FG+ A V
Sbjct: 217 TGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVS 276
Query: 242 STNQE-GHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGG--- 297
+ E FQ+ I ++ ++ ++VM P+ VLLI G
Sbjct: 277 EQDSEPNAFQQ--------GISRVSWLLIRFMLVMAPV-------------VLLINGYTK 315
Query: 298 -----------------IPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLC 340
P +P +++ T+A G+ +LS+Q I KR+ AI+ MD+LC
Sbjct: 316 GDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILC 375
Query: 341 SDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVEN--QDAIDACIVGMLGDA 398
+DKTGTLT +K+ ++ + ++ K ++ V+ S + ++ +D +L
Sbjct: 376 TDKTGTLTQDKIVLENH-TDISGKTSER--VLHSAWLNSHYQTGLKNLLD---TAVLEGV 429
Query: 399 KEARAGITELHF-----LPFNPVEKRTAITYIDSDGSWHR-ISKGAPEQIIELCN----- 447
E A + +PF+ E+R + + H+ I KGA E+I+ +C+
Sbjct: 430 DEESARSLASRWQKIDEIPFD-FERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHN 488
Query: 448 -----LREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPG----GPWQFVGLLPL 498
L + + + + D +GLR +AVA + +P + G +
Sbjct: 489 GEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPA-REGDYQRADESDLILEGYIAF 547
Query: 499 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDAN 558
DPP+ +A ++ GV VK++TGD +A + +G+ L+G ++
Sbjct: 548 LDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAG----EVLIG----SD 599
Query: 559 ISALPVDEL---IEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG 615
I L DEL E+ FA + P HK IV L+ H+ G GDG+NDAPAL+ ADIG
Sbjct: 600 IETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIG 659
Query: 616 IAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNY 658
I+V A D AR A+DI+L E L V+ V+ R F M Y
Sbjct: 660 ISVDGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKY 702
|
Length = 902 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 255 bits (654), Expect = 8e-72
Identities = 195/699 (27%), Positives = 314/699 (44%), Gaps = 110/699 (15%)
Query: 31 PINEVFEQLKCTREGLSNEEGQKRLVIFGPNKL-EEKKESKVLKFLGFMWNPLSWV-MEI 88
+ E L R+GL+ E+ +RL +GPN++ EK +++ L NP +V M +
Sbjct: 31 SLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVL 90
Query: 89 AAI---MAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQT 145
AAI L G+ D + I+ ++L++ + F +E + AA AL A +
Sbjct: 91 AAISFFTDYWLPLRRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTA 150
Query: 146 KVLR------DGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTGESL 199
VLR + RE LVPGD++ + GD+IPAD RL++ L I Q+ LTGE+L
Sbjct: 151 TVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLTGEAL 210
Query: 200 PVTK--------------MPGDEV---------FSGSTCKQGEIEAVVIATGVHTFFGKA 236
PV K + DE F G+ G AVV+ATG T+FG
Sbjct: 211 PVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSL 270
Query: 237 AHLVDSTNQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIG 296
A + T + F + + S++ ++ ++VM P+ VLLI
Sbjct: 271 AKSIVGTRAQTAFDR--------GVNSVSWLLIRFMLVMVPV-------------VLLIN 309
Query: 297 GI--------------------PIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 336
G P +P ++S +A G+ ++++ + KR+ AI+ M
Sbjct: 310 GFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAM 369
Query: 337 DVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVEN--QDAIDACIVGM 394
DVLC+DKTGTLT +++ ++ +L V + V+ S ++ ++ +D +V
Sbjct: 370 DVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNLMDQAVVA- 425
Query: 395 LGDAKEARA---GITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCN---- 447
+ G ++ LPF+ V +R ++ D+ G I KGA E+++ +
Sbjct: 426 FAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRD 485
Query: 448 ------LREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESP---GGPWQFV--GLL 496
L E R + + + + G R L VA + +P + V G L
Sbjct: 486 GDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFL 545
Query: 497 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKD 556
DPP+ +A I GV VK++TGD + + R +G+ P LLG
Sbjct: 546 TFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLE----PGEPLLGT--- 598
Query: 557 ANISALPVDEL---IEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKAD 613
I A+ L +E+ FA + P K +++ LQ H G GDG+NDAPAL+ AD
Sbjct: 599 -EIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDAD 657
Query: 614 IGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIF 652
+GI+V D A+ ++DI+L E L V+ V+ R F
Sbjct: 658 VGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETF 696
|
Length = 903 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 239 bits (611), Expect = 6e-66
Identities = 177/707 (25%), Positives = 316/707 (44%), Gaps = 88/707 (12%)
Query: 46 LSNEEGQKRLVIFGPNKLEEKKESKVLKFLGFMWNPLSWVM----EIAAIMAIALA---- 97
LS+ ++R ++G N+L EK FL +W LS +AA++++ L
Sbjct: 62 LSSSTLERREKVYGKNELPEKPP---KSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEP 118
Query: 98 --NGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQ-TKVLRDGAWR 154
W + V I+V +++ ++ + + L + Q V+R G +
Sbjct: 119 GEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGG--Q 176
Query: 155 EQEASI--LVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTKMPGDEVF-- 210
EQ+ SI +V GD++S+ GD++PAD + G L+ID+S++TGES P+ K P + F
Sbjct: 177 EQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGPVQDPFLL 236
Query: 211 SGSTCKQGEIEAVVIATGVHTFFGKAAHLV-----DSTNQEGHFQKVLTAIGNFCICSIA 265
SG+ +G +V A GV++F GK + DST + ++ IG F + S
Sbjct: 237 SGTVVNEGSGRMLVTAVGVNSFGGKLMMELRQAGEDSTPLQEKLSELAGLIGKFGMGSAV 296
Query: 266 IGMVI----EIIVMYPIQHRAYRNGIDNLLVLLIGGIPI---AMPTV--LSVTMAI--GS 314
+ ++ + + R L I + I A+P L+VT+A+
Sbjct: 297 LLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSM 356
Query: 315 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTV--------DKNLVEVFVKDM 366
++ + + + + A E M +CSDKTGTLT N ++V N+ +V
Sbjct: 357 KKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVP 416
Query: 367 DKDTVILYGARA-------------------SRVENQDAIDACIVGMLGDAKEARAGITE 407
IL + S+ E A+ + +L D +E RA
Sbjct: 417 KHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTEC--ALLDFGLLLLRDYQEVRAEEKV 474
Query: 408 LHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCN-----------LREDVRNKA 456
+ PFN K ++ S G + KGA E +++ C + +D +++
Sbjct: 475 VKIYPFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDKDRC 534
Query: 457 HTIIDKFADRGLRSLAVAEQSVPEKT---KESPGGPWQFVGLLPLFDPPRHDSAETIRRA 513
+I+ A LR++ +A + + K+ P +G++ + DP R E ++
Sbjct: 535 ADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNKGLTLIGVVGIKDPLRPGVREAVQEC 594
Query: 514 LNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADG 573
G+ V+M+TGD + AK R G+ T + A+ G+ + ++ +D ++ K
Sbjct: 595 QRAGITVRMVTGDNIDTAKAIARNCGILT--FGGLAMEGK-EFRSLVYEEMDPILPKLRV 651
Query: 574 FAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADA-TDAARGASDIV 632
A P K +V L++ + +TGDG NDAPALK AD+G ++ + T+ A+ ASDI+
Sbjct: 652 LARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDII 711
Query: 633 LTEPGLSVIVSAVLTSRAIFQRMKNY-----TIYAVSITIRIVLGFL 674
L + + IV AV R ++ ++ + T+ V++ + V +
Sbjct: 712 LLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCI 758
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 234 bits (600), Expect = 9e-66
Identities = 162/614 (26%), Positives = 246/614 (40%), Gaps = 106/614 (17%)
Query: 86 MEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTIS-FIEE---NNAGNAAAALMAGL 141
+ +A I A A + P + + +++ L + ++E A A AL+ L
Sbjct: 153 VALATIGAYAYSLYATLFPVYFE-EAAMLIFLF--LLGRYLEARAKGRARRAIRALLD-L 208
Query: 142 APQT--KVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTGESL 199
AP+T V DG E + GD++ ++ G+ IP D ++ G +D+S LTGESL
Sbjct: 209 APKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSSS-VDESMLTGESL 267
Query: 200 PVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV-DSTNQEGHFQKVLTAI-G 257
PV K PGDEVF+G+ G + V G T + LV ++ + + Q++ +
Sbjct: 268 PVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVAS 327
Query: 258 NFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAI--GSH 315
F + I + + + + L +L+ P A+ L+ AI G
Sbjct: 328 YFVPVVLVIA-ALTFALWPLFGGGDWETALYRALAVLVIACPCAL--GLATPTAILVGIG 384
Query: 316 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYG 375
R +++G + K A+E +A +D + DKTGTLT K V +V D D+D ++
Sbjct: 385 RAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEV----TDVVALDGDEDELL--- 437
Query: 376 ARASRVENQ------DAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAIT------ 423
A A+ +E AI K A VE I
Sbjct: 438 ALAAALEQHSEHPLAKAI----------VKAAAE-------RGLPDVEDFEEIPGRGVEA 480
Query: 424 YIDSDGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTK 483
+D R+ G + E I+ G + VA
Sbjct: 481 EVDG----ERVLVGNARLLGEE----GIDLPLLSERIEALESEGKTVVFVAVDG------ 526
Query: 484 ESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTN 543
+ VG++ L D R D+ E I LG+ V M+TGD A+ + LG
Sbjct: 527 -------KLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELG---- 575
Query: 544 MYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGV 603
+DE+ A + PE K EIVR+LQ M GDG+
Sbjct: 576 --------------------IDEV------RAELLPEDKAEIVRELQAEGRKVAMVGDGI 609
Query: 604 NDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMK-NYTIYA 662
NDAPAL AD+GIA+ TD A A+D+VL LS + A+ SRA + +K N
Sbjct: 610 NDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAF 669
Query: 663 VSITIRIVLGFLLI 676
I I L +
Sbjct: 670 GYNAIAIPLAAGGL 683
|
Length = 713 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 228 bits (583), Expect = 4e-62
Identities = 201/790 (25%), Positives = 345/790 (43%), Gaps = 138/790 (17%)
Query: 17 LEEIKKE-NVDLERIPINEVFE--QLKCTREGLSNEEGQKRLVIFGPNKLEEKKES-KVL 72
L+E+KKE +D ++ ++E+ ++ GLS + L GPN L + + +
Sbjct: 6 LDELKKEVEMDDHKLSLDELERKYGTDLSK-GLSAARAAEILARDGPNALTPPPTTPEWV 64
Query: 73 KFLGFMWNPLSWVMEIAAIMA-IAL---ANGGGKPPDWQDFVGIV--VLLLINSTISFIE 126
KF ++ S ++ I AI+ +A A+ +P + ++G+V +++I S+ +
Sbjct: 65 KFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQ 124
Query: 127 ENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDP 186
E + + + Q V+RDG A +V GD++ +K GD IPAD R++
Sbjct: 125 EAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG 184
Query: 187 LKIDQSALTGESLPVTKMPG----------DEVFSGSTCKQGEIEAVVIATGVHTFFGKA 236
K+D S+LTGES P T+ P + F + C +G +V+ TG T G+
Sbjct: 185 CKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRI 244
Query: 237 AHLVDSTNQEG--------HFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGID 288
A L HF ++T + F S ++ +I+ Y + +
Sbjct: 245 ASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSF---FILSLILGY-----TWLEAVI 296
Query: 289 NLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLT 348
L+ +++ +P + ++V + + + R++++ + K + A+E + +CSDKTGTLT
Sbjct: 297 FLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLT 356
Query: 349 LNKLTV-----DKNLVEVFVKD------MDKDT--------VILYGARASRVENQDAI-- 387
N++TV D + E + DK + + RA Q+ +
Sbjct: 357 QNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENVPI 416
Query: 388 -------DA-------CIVGMLGDAKEARAGITELHFLPFNPVEK-RTAI-TYIDSDGSW 431
DA CI LG E R ++ +PFN K + +I D
Sbjct: 417 LKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPR 476
Query: 432 H-RISKGAPEQIIELCN----------LREDVRNKAHTIIDKFADRGLRSLAVAEQSVPE 480
H + KGAPE+I+E C+ L E+++ + G R L +P+
Sbjct: 477 HLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPD 536
Query: 481 KTKESPGG----------PWQ---FVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ 527
++ P G P FVGL+ + DPPR + + + + G+ V M+TGD
Sbjct: 537 --EQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDH 594
Query: 528 ----LAIAKETG-------------RRLGMG-TNMYPSSALLGQIKDANISALPVDELIE 569
AIAK G RL + + + P A + +++ + ++L E
Sbjct: 595 PITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDE 654
Query: 570 KADG-----FAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADA-TD 623
FA P+ K IV Q + I +TGDGVND+PALKKADIG+A+ A +D
Sbjct: 655 ILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSD 714
Query: 624 AARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIALIWKFD 683
++ A+D++L + + IV+ V R IF +K Y ++ I +
Sbjct: 715 VSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIP--------------E 760
Query: 684 FSPFMVLIIA 693
+PF++ IIA
Sbjct: 761 ITPFLIFIIA 770
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 219 bits (561), Expect = 8e-62
Identities = 151/610 (24%), Positives = 252/610 (41%), Gaps = 90/610 (14%)
Query: 86 MEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQT 145
M++ +A A G + ++ L L+ T+ + A +A +AL+A LAP T
Sbjct: 1 MDLLMALATIAAYAMG---LVLEGALLLFLFLLGETLEERAKGRASDALSALLA-LAPST 56
Query: 146 KVLRDGAWREQEASI--LVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTK 203
+ G E+E + L GD++ ++ G+ IP D ++ G+ +D+SALTGES+PV K
Sbjct: 57 ARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVISGESE-VDESALTGESMPVEK 115
Query: 204 MPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQE-GHFQKVLTAIGNFCIC 262
GDEVF+G+ G + V G + + LV+ Q++ I ++ +
Sbjct: 116 KEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVELVEEAQSSKAPIQRLADRIASYYVP 175
Query: 263 SIAIGMVIEIIVMYPIQHRA--YRNGIDNLLVLLIGGIPIAMPTVLSVTMAI--GSHRLS 318
++ ++ +V + YR L +L+ P A+ L+ +AI +
Sbjct: 176 AVLAIALLTFVVWLALGALGALYR-----ALAVLVVACPCAL--GLATPVAILVAIGVAA 228
Query: 319 QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARA 378
++G + K A+E++A + + DKTGTLT K TV +E + +L A A
Sbjct: 229 RRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVD--IEPLDDASISEEELLALAAA 286
Query: 379 SRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAIT------YIDSDGSWH 432
+ + IV + A+ L E + +D
Sbjct: 287 LEQSSSHPLARAIV------RYAKK-----RGLELPKQEDVEEVPGKGVEATVDGGEEVR 335
Query: 433 RISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQF 492
+ E IE + D+ N+ +G + VA +
Sbjct: 336 IGNPRFLELAIEPISASPDLLNEG-------ESQGKTVVFVAVDG-------------EL 375
Query: 493 VGLLPLFDPPRHDSAETIRRALNLGV-NVKMITGDQLAIAKETGRRLGMGTNMYPSSALL 551
+G++ L D R ++ E I G + M+TGD + A+ LG
Sbjct: 376 LGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELG------------ 423
Query: 552 GQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKK 611
+DE+ A + PE K IV++LQE + M GDG+NDAPAL
Sbjct: 424 ------------IDEV------HAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAA 465
Query: 612 ADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMK-NYTIYAVSITIRIV 670
AD+GIA+ +D A A+DIVL LS + +A+ SR + +K N + I
Sbjct: 466 ADVGIAMGAGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIP 525
Query: 671 LGFLLIALIW 680
L + +W
Sbjct: 526 LAAGGLLPLW 535
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 193 bits (492), Expect = 3e-56
Identities = 77/223 (34%), Positives = 128/223 (57%), Gaps = 4/223 (1%)
Query: 112 IVVLLLINSTISFIEENNAGNAAAALMAGLAPQ-TKVLRDGAWREQEASILVPGDVISIK 170
I++L+LIN+ + +E A A AL L P V+RDG E A LV GD++ +K
Sbjct: 2 ILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLK 61
Query: 171 LGDIIPADARLLDGDPLKIDQSALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVH 230
GD +PAD R+++G L++D+SALTGESLPV K GD VF+G+ GE++ +V ATG
Sbjct: 62 PGDRVPADGRIIEGS-LEVDESALTGESLPVEKSRGDTVFAGTVVLSGELKVIVTATGED 120
Query: 231 TFFGKAAHLVDSTNQE-GHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDN 289
T GK A LV+ Q++L + + I + + I + +++ + + +
Sbjct: 121 TELGKIARLVEEAKSAKTPLQRLLDKLAKI-LVPIVLALAILVFLIWFFRGGDFLEALLR 179
Query: 290 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEE 332
L +L+ P A+P + + +A+G+ RL+++G + K ++A+E
Sbjct: 180 ALAVLVAACPEALPLAVPLALAVGAGRLAKKGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 196 bits (500), Expect = 2e-53
Identities = 156/623 (25%), Positives = 262/623 (42%), Gaps = 114/623 (18%)
Query: 82 LSWVMEIAAIMAIALANGGGKPPDWQD-FVGIVVLLLINSTISFIEENNAGNAAAAL--M 138
+++ + A++A G + D ++ +L+ ++E G A+ AL +
Sbjct: 30 VAYGYSLVALLA-NQVLTGLHVHTFFDASAMLITFILLGR---WLEMLAKGRASDALSKL 85
Query: 139 AGLAPQT--KVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTG 196
A L P T + DG E +L PGD++ + G+ IP D +++G+ ++D+S +TG
Sbjct: 86 AKLQPSTATLLTDDGEIEEVPVELLQPGDIVRVLPGEKIPVDGTVIEGES-EVDESLVTG 144
Query: 197 ESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQE---------- 246
ESLPV K GD V +G+ G + ATG T + LV Q
Sbjct: 145 ESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADK 204
Query: 247 --GHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIG---GIPIA 301
G+F V+ AI + + I +++ ++ ++ A + VL+I + +A
Sbjct: 205 VAGYFVPVVIAIA---LITFVIWLILGADFVFALE-VA-------VTVLIIACPCALGLA 253
Query: 302 MPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEV 361
PTV+ A+ + ++ G + K A+E A +D + DKTGTLT K TV V V
Sbjct: 254 TPTVI----AVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTV--TDVHV 307
Query: 362 FVKDMDKDTVILYGARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTA 421
F + + + L A + E+ A ++ AK +++ V A
Sbjct: 308 FGESDRDELLALAAALEAGSEHPLA-----KAIVSYAKAKGITLSQ--------VSDFKA 354
Query: 422 ITYIDSDGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRG-LRSLAVAEQSVPE 480
I I +G+ I+L N + N T + G L +
Sbjct: 355 IPGIGVEGTVE-------GHTIQLGNEKLLGENGLKTDGEVEEGGGTTSVLVAVNGEL-- 405
Query: 481 KTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGM 540
G+L L D + ++ E I+ G+ M+TGD AK + LG
Sbjct: 406 ------------AGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELG- 452
Query: 541 GTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTG 600
IE + A V P+ K +++KLQE+ + M G
Sbjct: 453 ---------------------------IE--NVRAEVLPDDKAALIKKLQEKGKVVAMVG 483
Query: 601 DGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKN--- 657
DG+NDAPAL +AD+GIA+ TD A A+D+VL L+ + +A+ SR +R+K
Sbjct: 484 DGINDAPALAQADVGIAIGAGTDVAIEAADVVLLRNDLNDVATAIDLSRKTLRRIKQNLL 543
Query: 658 ----YTIYAVSITIRIVLGFLLI 676
Y + A+ I ++ ++
Sbjct: 544 WAFGYNVIAIPIAAGVLYPAGIL 566
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 182 bits (463), Expect = 6e-49
Identities = 156/628 (24%), Positives = 254/628 (40%), Gaps = 119/628 (18%)
Query: 86 MEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQT 145
M +AA+ A+A+ ++ + +++L I T+ A A ALM LAP T
Sbjct: 5 MALAALGAVAIG-------EYLEGALLLLLFSIGETLEEYASGRARRALKALME-LAPDT 56
Query: 146 -KVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTKM 204
+VLR G+ E L GDV+ +K G+ +P D +L G +D+SALTGES+PV K
Sbjct: 57 ARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLSGTST-VDESALTGESVPVEKA 115
Query: 205 PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV-DSTNQEGHFQKVLTAIG-NFCIC 262
PGDEVF+G+ G + VV + K +LV ++ +++ Q+ + +
Sbjct: 116 PGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPV 175
Query: 263 SIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAI--GSHRLSQQ 320
+AI + I +V ++ + + LVLL+ P A+ V+S A ++
Sbjct: 176 VLAIALAI-WLVPGLLKRWPF--WVYRALVLLVVASPCAL--VISAPAAYLSAISAAARH 230
Query: 321 GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVF---VKDMDK-------DT 370
G + K A+E +A + + DKTGTLT + V + ++
Sbjct: 231 GILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPAEVLRLAAAAEQASSHPLARA 290
Query: 371 VILYGARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGS 430
++ Y + VE+ + + V + D E R G NP A+
Sbjct: 291 IVDYARKRENVESVEEVPGEGVRAVVDGGEVRIG---------NPRSLEAAVGARPESAG 341
Query: 431 WHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPW 490
+ + L ++ R A I L++L +
Sbjct: 342 KTIVHVARDGTYLGYILLSDEPRPDAAEAI-----AELKALGIE---------------- 380
Query: 491 QFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 550
V M+TGD+ A+A+ R LG
Sbjct: 381 ----------------------------KVVMLTGDRRAVAERVARELG----------- 401
Query: 551 LGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALK 610
+DE+ A + PE K EIV++L+E+ M GDG+NDAPAL
Sbjct: 402 -------------IDEV------HAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALA 442
Query: 611 KADIGIAV-ADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMK-NYTIYAVSITIR 668
AD+GIA+ A +D A +D+VL LS + A+ +R + +K N I I +
Sbjct: 443 AADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLL 502
Query: 669 IVLGFLLIALIWKFDFSPFMVLIIAILN 696
I+L + +W ++ ILN
Sbjct: 503 ILLALFGVLPLWLAVLGHEGSTVLVILN 530
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 166 bits (422), Expect = 4e-42
Identities = 98/295 (33%), Positives = 145/295 (49%), Gaps = 38/295 (12%)
Query: 435 SKGAPEQIIELCN-----------LREDVRNKAHTIIDKFADR-GLRSLAVAEQSVPEKT 482
KGAPE ++E C L + ++N ++I + LR LA+A + +P+
Sbjct: 449 VKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPR 508
Query: 483 KESPGGPWQ----------FVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAK 532
+E F+G++ + DPPR + A+ I + G+ V MITGD A+
Sbjct: 509 EEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAE 568
Query: 533 ETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADG--------FAGVFPEHKYE 584
RR+G+ P + + + + DE+ F+ V P HK E
Sbjct: 569 AICRRIGI---FSPDEDVTFK----SFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSE 621
Query: 585 IVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSA 644
+V LQE+ I MTGDGVNDAPALKKADIGIA+ T+ A+ ASD+VL + + IV+A
Sbjct: 622 LVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAA 681
Query: 645 VLTSRAIFQRMKNYTIYAVSITI-RIVLGFLLIALIWKFDFSPFMVLIIAILNDG 698
V RAI+ MK + Y +S I +V FL AL P +L + ++ DG
Sbjct: 682 VEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDG 736
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 148 bits (375), Expect = 8e-37
Identities = 145/585 (24%), Positives = 241/585 (41%), Gaps = 100/585 (17%)
Query: 80 NPLSWVMEIAAIMAIAL---ANGGGKPPDWQDFVGIVVLLLINSTISF--IEENNA---G 131
NP+ +V+E+ +I+ L + G + F + ++L T+ F E A G
Sbjct: 32 NPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILW-FTVLFANFAEAVAEGRG 90
Query: 132 NAAAALMAGLAPQT---KVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLK 188
A A + +T + DG+ A+ L GD++ ++ G+IIP+D +++G
Sbjct: 91 KAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-S 149
Query: 189 IDQSALTGESLPVTKMPG---DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ 245
+D+SA+TGES PV + G V G+ ++ + A TF + LV+ +
Sbjct: 150 VDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAER 209
Query: 246 EGHFQKVLTAIG-NFCICSIAIGMVIEIIVMYPIQHRAYRNGID--NLLVLLIGGIPIAM 302
QK I + + + ++ + +YP + L+ LL+ IP +
Sbjct: 210 ----QKTPNEIALTILLSGLTLIFLLAVATLYPFAIYSGGGAASVTVLVALLVCLIPTTI 265
Query: 303 PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLTVDKNLVEV 361
+LS G R++Q I A+E +D L DKTGT+TL N+ +
Sbjct: 266 GGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASE------ 319
Query: 362 F--VKDMDKDTVILYGARASRVENQDAIDACIVGM---LGDAKEARAGITELHFLPFNPV 416
F V + ++ + AS + ++ IV + LG + F+PF
Sbjct: 320 FIPVPGVSEEELADAAQLAS-LADETPEGRSIVELAKKLGIELREDDLQSHAEFVPFT-- 376
Query: 417 EKRTAITYIDSDGSWHRISKGAPEQIIELCNLR-----EDVRNKAHTIIDKFADRGLRSL 471
+T ++ +D G I KGA + I R ED+ +D+ + G L
Sbjct: 377 -AQTRMSGVDLPGG-REIRKGAVDAIRRYVRERGGHIPEDLD----AAVDEVSRLGGTPL 430
Query: 472 AVAEQSVPEKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ---- 527
V E + +G++ L D + E +G+ MITGD
Sbjct: 431 VVVENG-------------RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTA 477
Query: 528 LAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVR 587
AIA E G VD+ I +A PE K ++R
Sbjct: 478 AAIAAEAG----------------------------VDDFIAEAT------PEDKLALIR 503
Query: 588 KLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIV 632
+ Q + MTGDG NDAPAL +AD+G+A+ T AA+ A+++V
Sbjct: 504 QEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMV 548
|
Length = 681 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 143 bits (363), Expect = 5e-35
Identities = 95/296 (32%), Positives = 151/296 (51%), Gaps = 30/296 (10%)
Query: 89 AAIMAIALANGGGKPPDWQDFVGIVVLLLI---NSTISFIEENNAGNAAAALMAGLAPQT 145
AA ++ LA FV V+LLI N+ + +E NA A AL +
Sbjct: 16 AACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHA 75
Query: 146 KVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTK-- 203
KVLRDG W +A LVPGD++ + +GD +PAD R+L L++DQS LTGES+ V K
Sbjct: 76 KVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHT 135
Query: 204 --MPGDE---------VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGH-FQK 251
+P + +FSG+ G+ VV+ TG+ T GK + + QE QK
Sbjct: 136 ESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQK 195
Query: 252 VLTAIGNFCICSIAIGMVIEIIVMYPIQH--------RAYRNGIDNLLV---LLIGGIPI 300
L G + S IG++ ++ + I H + I + L + IP
Sbjct: 196 KLDEFGE--LLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYFKIAVALAVAAIPE 253
Query: 301 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK 356
+P V++ +A+G+ +++++ AI +++ ++E + V+CSDKTGTLT N+++V K
Sbjct: 254 GLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCK 309
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 139 bits (352), Expect = 1e-33
Identities = 118/432 (27%), Positives = 189/432 (43%), Gaps = 72/432 (16%)
Query: 359 VEVFVKDMDKDTVILYGARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEK 418
+ VF K D L G N++ + + K A + PF+ K
Sbjct: 482 IHVFAKKFDLPHNALTGEEDLLKSNENDQSSL---SQHNEKPGSAQFEFIAEFPFDSEIK 538
Query: 419 RTAITYIDSDGSWHRI-SKGAPEQIIELCNL----------------REDVRNKAHTIID 461
R A Y D+ G + I +KGA E+IIE C+ RE + ++
Sbjct: 539 RMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESL-- 596
Query: 462 KFADRGLRSLAVAEQSV---------------PEKTKESPGGPWQFVGLLPLFDPPRHDS 506
A GLR LA A +S T ES +F+GL+ ++DPPR++S
Sbjct: 597 --AAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESD---LEFLGLIGIYDPPRNES 651
Query: 507 AETIRRALNLGVNVKMITGDQLAIAKETGRRLG-MGTNMYPSS-------ALLGQIKDAN 558
A + + G+NV M+TGD AK + +G + N + G DA
Sbjct: 652 AGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDA- 710
Query: 559 ISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAV 618
+S VD+L A P+ K +++ L RK C MTGDGVND+P+LK A++GIA+
Sbjct: 711 LSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAM 770
Query: 619 A-DATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIA 677
+ +D A+ ASDIVL++ + I++A+ R +F + + ++ ++ + + L+I
Sbjct: 771 GINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAI-LLIIG 829
Query: 678 LIWK-------FDFSPFMVL-IIAILNDGTIMTISKDRVKPS----PVPD------TWKL 719
L ++ F SP +L I I + M + ++ P D +L
Sbjct: 830 LAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQKEL 889
Query: 720 -KEIFATGIVLG 730
++FA G LG
Sbjct: 890 IIDMFAYGFFLG 901
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 139 bits (352), Expect = 2e-33
Identities = 149/698 (21%), Positives = 256/698 (36%), Gaps = 155/698 (22%)
Query: 139 AGLAPQT-KVLRDGAWREQEASILVPGDVISIKL--GDIIPADARLLDGDPLKIDQSALT 195
PQ+ V+R+G W + LVPGD++SI +P D+ LL G + +++S LT
Sbjct: 224 MVHKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGSCI-VNESMLT 282
Query: 196 GESLPVTKMP------GDEV------------FSG-------STCKQGEIEAVVIATGVH 230
GES+PV K P DE F G A+V+ TG
Sbjct: 283 GESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFS 342
Query: 231 TFFGKAAH------LVDSTNQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYR 284
T G+ + F+ +L F IG + II + +
Sbjct: 343 TSKGQLVRSILYPKPRVFKFYKDSFKFIL-----FLAVLALIGFIYTIIELIKDGRPLGK 397
Query: 285 NGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKT 344
+ +L ++ I +P A+P LS+ + RL ++G I +DV C DKT
Sbjct: 398 IILRSLDIITIV-VPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKT 456
Query: 345 GTLTLNKLTVD----KNLVEVFVKDMDKDT----VILYGARAS-----RVENQDAIDACI 391
GTLT + L + + + F+K + +D+ I + A A+ ++E + D
Sbjct: 457 GTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLD 516
Query: 392 VGML----------GDAKEARAGITELHF------------LPFNPVEKRTA-ITYIDSD 428
M ++ E + + + F+ +R + I + +
Sbjct: 517 KKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDE 576
Query: 429 GSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKT------ 482
S KGAPE I LC+ E V + ++ + G R LA+A + +P+ T
Sbjct: 577 RSPDAFVKGAPETIQSLCS-PETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQD 635
Query: 483 --KESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGM 540
+++ F+G + +P + D+ E I+ + MITGD A R G+
Sbjct: 636 LSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGI 695
Query: 541 GTN---MYPSSALLGQ-IKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHIC 596
+ + A + K I +D + + +P + + L R H+
Sbjct: 696 VNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLA 755
Query: 597 GMTGD--------------------------------------------------GVNDA 606
M+G G ND
Sbjct: 756 -MSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDC 814
Query: 607 PALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSIT 666
ALK+AD+GI++++A A A+ +S + + + R A+ +
Sbjct: 815 GALKQADVGISLSEAE--ASVAAPFTSKLASISCVPNVIREGRC-----------ALVTS 861
Query: 667 IRIVLGFLLIALIWKFDFSPFMVLIIAILNDGTIMTIS 704
++ L +LI + S + LI + L DG +TI
Sbjct: 862 FQMFKYMALYSLIQFYSVS-ILYLIGSNLGDGQFLTID 898
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 132 bits (333), Expect = 3e-31
Identities = 101/366 (27%), Positives = 162/366 (44%), Gaps = 72/366 (19%)
Query: 44 EGLSNEEGQKRLVIFGPNKLEEKKESKVLK-FLGFMWNPLSWVMEIAAIMAIALANGGGK 102
EGL+++E Q RL G N+LE L + N + V+ IAA ++ A+
Sbjct: 25 EGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH----- 79
Query: 103 PPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILV 162
DW + I ++ +N I FI+E A +L +P V+R+G ++ LV
Sbjct: 80 --DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLV 137
Query: 163 PGDVISIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTKMP------------GDEV- 209
PGD+ +K GD IPAD RL++ D++ LTGESLPV K GD +
Sbjct: 138 PGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRIN 197
Query: 210 --FSGSTCKQGEIEAVVIATGVHTFFGKAA------------------------------ 237
FS S +G + + IAT +++ G A
Sbjct: 198 LAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILK 257
Query: 238 ------HLVDSTNQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDN-- 289
N + L+ + C I ++ IIVM A++ +D
Sbjct: 258 VTKKVTGAFLGLNVGTPLHRKLSKLAVILFC---IAIIFAIIVM-----AAHKFDVDKEV 309
Query: 290 ---LLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGT 346
+ L I IP ++ VLS+TMA+G+ +S++ I +++ A+E + ++ +CSDKTGT
Sbjct: 310 AIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGT 369
Query: 347 LTLNKL 352
+T K+
Sbjct: 370 ITQGKM 375
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 128 bits (324), Expect = 2e-30
Identities = 154/600 (25%), Positives = 238/600 (39%), Gaps = 128/600 (21%)
Query: 78 MW-NPLSWVMEIAAIM--AIALANGGGKPPDWQDFVGIVVLLLINSTISF--IEENNA-- 130
NP+ +V+E+ +I+ + +A + F + L L T+ F E A
Sbjct: 30 QIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLW-FTVLFANFAEALAEG 88
Query: 131 -GNAAAALMAGLAPQT---KVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDP 186
G A A + G T K+ GA E A+ L GD++ ++ G+IIPAD +++G
Sbjct: 89 RGKAQADSLRGAKKDTFARKLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA 148
Query: 187 LKIDQSALTGESLPVTKMPGDEVFS---GSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 243
+D+SA+TGES PV + G + S G+ I + A +F + LV+
Sbjct: 149 -SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIRITANPGESFLDRMIALVEGA 207
Query: 244 NQEGHFQKVLTAIG-NFCICSIAIGMVIEIIVMYPIQHRAYRN-GIDNLLVLLIGGIPIA 301
+ QK I + + I ++ + + P + I L+ LL+ IP
Sbjct: 208 KR----QKTPNEIALTILLAGLTIIFLLVVATLPPFAAYSGGALSITVLVALLVCLIPTT 263
Query: 302 MPTVLSVTMAIG---SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLTVDKN 357
+ +LS AIG R+ Q I A+E +D L DKTGT+TL N+ +
Sbjct: 264 IGGLLS---AIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASE-- 318
Query: 358 LVEVFVKDMDKDTVILYGARASRVENQDAIDACIVGMLGD-----------AK------E 400
F+ V ++ DA + L D AK E
Sbjct: 319 ----FLP-------------VPGVTEEELADAAQLSSLADETPEGRSIVVLAKQRFNLRE 361
Query: 401 ARAGITELHFLPFNPVEKRTAITY---IDSDGSWHRISKGAPEQIIELCNLR-EDVRNKA 456
F+PF +A T +D DG I KGA + I +
Sbjct: 362 RDLQSLHATFVPF------SAQTRMSGVDLDG--REIRKGAVDAIRRYVESNGGHFPAEL 413
Query: 457 HTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNL 516
+D+ A +G L VAE + + +G++ L D + E +
Sbjct: 414 DAAVDEVARKGGTPLVVAEDN-------------RVLGVIYLKDIVKPGIKERFAELRKM 460
Query: 517 GVNVKMITGD-QL---AIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKAD 572
G+ MITGD L AIA E G VD+ + +A
Sbjct: 461 GIKTVMITGDNPLTAAAIAAEAG----------------------------VDDFLAEAT 492
Query: 573 GFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIV 632
PE K ++R+ Q + MTGDG NDAPAL +AD+G+A+ T AA+ A ++V
Sbjct: 493 ------PEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAGNMV 546
|
Length = 679 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 128 bits (322), Expect = 2e-30
Identities = 146/586 (24%), Positives = 242/586 (41%), Gaps = 99/586 (16%)
Query: 78 MWNPLSWVMEIAAIM----AIALANGGGKPPDWQDFVGIVVLLLINSTI--SFIEE--NN 129
NP+ +++ + +++ IA A+ G + F I+ +L + + +F E
Sbjct: 30 WRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEG 89
Query: 130 AGNAAAALMAGLAPQT--KVLR-DGAWREQEASILVPGDVISIKLGDIIPADARLLDGDP 186
G A A + G T K+LR DGA + A L GD++ ++ GD+IP D +++G
Sbjct: 90 RGKAQADSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGVA 149
Query: 187 LKIDQSALTGESLPVTKMPGDEVFS---GSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 243
+D+SA+TGES PV K G + S G+ + A TF + LV+
Sbjct: 150 -SVDESAITGESAPVIKESGGDFASVTGGTRILSDWLVVECTANPGETFLDRMIALVEGA 208
Query: 244 NQEGHFQKVLTAIG-NFCICSIAIGMVIEIIVMYPIQHRAYRNG----IDNLLVLLIGGI 298
+ +K I + ++ + ++ ++P A G + L+ LL+ I
Sbjct: 209 QR----RKTPNEIALTILLIALTLVFLLVTATLWPF---AAYGGNAISVTVLVALLVCLI 261
Query: 299 PIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLTVDKN 357
P + +LS G R+ I A+E +D L DKTGT+TL N+L +
Sbjct: 262 PTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEF- 320
Query: 358 LVEVFVKDMDKDTVILYGARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVE 417
+ + +D+ T+ AS + D + + +L R + F
Sbjct: 321 ---IPAQGVDEKTLADAAQLASLAD--DTPEGKSIVILAKQLGIREDDVQSLHATFVEFT 375
Query: 418 KRTAITYIDSDGSWHRISKGAPEQIIELCNLREDVRNKAHTI-------IDKFADRGLRS 470
+T ++ I+ D I KGA + I + V I +D+ A +G
Sbjct: 376 AQTRMSGINLDNG-RMIRKGAVDAI------KRHVEANGGHIPTDLDQAVDQVARQGGTP 428
Query: 471 LAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ--- 527
L V E + + G++ L D + E + +G+ MITGD
Sbjct: 429 LVVCEDN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLT 475
Query: 528 -LAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIV 586
AIA E G VD+ I +A PE K ++
Sbjct: 476 AAAIAAEAG----------------------------VDDFIAEAT------PEDKIALI 501
Query: 587 RKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIV 632
R+ Q + MTGDG NDAPAL +AD+G+A+ T AA+ A+++V
Sbjct: 502 RQEQAEGKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMV 547
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 124 bits (312), Expect = 4e-29
Identities = 143/617 (23%), Positives = 262/617 (42%), Gaps = 106/617 (17%)
Query: 80 NPLSWVMEIAAIMAIALANGGGKPPDWQDFVGI---------VVLLLINSTISFIEENNA 130
NP+ +V+E+ ++A+ L PD + ++LLL +F E
Sbjct: 32 NPIMFVVEVGMLLALGLTIY----PDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAE 87
Query: 131 GNAAAALMAGLAPQT-----KVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGD 185
G A A QT ++ +DG++ +AS L G ++ + G+ IP D +++ G
Sbjct: 88 GRGKAQANALRQTQTEMKARRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKG- 146
Query: 186 PLKIDQSALTGESLPVTKMPG---DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS 242
+D+SA+TGES PV K G D V G++ +E + + H+F K LV+
Sbjct: 147 LATVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEG 206
Query: 243 TNQEGHFQKVLTAIGNFCIC-SIAIGMVIEIIVMYPIQHRAYRN-GIDNLLVLLIGGIPI 300
+ +K I F + ++ I ++ I+ MYP+ N I L+ L + IP
Sbjct: 207 ATR----KKTPNEIALFTLLMTLTIIFLVVILTMYPLAKFLNFNLSIAMLIALAVCLIPT 262
Query: 301 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NKLTVDKNLV 359
+ +LS G R++Q + K ++E ++VL DKTGT+T N++ +
Sbjct: 263 TIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADA--FI 320
Query: 360 EVFVKDMDKDTVILYGARASRVENQDAIDACIVGMLGDAKEARAGITEL-----HFLPFN 414
V ++ ++ A S + + IV K A +L ++PF
Sbjct: 321 PVKSSSFER---LVKAAYESSIADDTPEGRSIV------KLAYKQHIDLPQEVGEYIPFT 371
Query: 415 PVEKRTAITYIDSDGSWHRISKGAPEQIIELCNLRE---DVRNKAHTIIDKFADRGLRSL 471
+ + + + + + KGAP +++ ++E + ++ + +G L
Sbjct: 372 AETRMSGVKF-----TTREVYKGAPNSMVK--RVKEAGGHIPVDLDALVKGVSKKGGTPL 424
Query: 472 AVAEQSVPEKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGD-QL-- 528
V E + +G++ L D + E R +G+ M TGD +L
Sbjct: 425 VVLEDNE-------------ILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTA 471
Query: 529 -AIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVR 587
IAKE G VD + + PE K ++R
Sbjct: 472 ATIAKEAG----------------------------VDRFVAECK------PEDKINVIR 497
Query: 588 KLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLT 647
+ Q + HI MTGDG NDAPAL +A++G+A+ T +A+ A++++ + + ++ VL
Sbjct: 498 EEQAKGHIVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAANLIDLDSNPTKLMEVVLI 557
Query: 648 SRAIFQRMKNYTIYAVS 664
+ + + T ++++
Sbjct: 558 GKQLLMTRGSLTTFSIA 574
|
Length = 673 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 93.3 bits (232), Expect = 3e-19
Identities = 56/170 (32%), Positives = 78/170 (45%), Gaps = 38/170 (22%)
Query: 491 QFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQL----AIAKETGRRLGMGTNMYP 546
+ LL + DP R DS ++R G + M+TGD AIAKE G
Sbjct: 640 KAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAG----------- 688
Query: 547 SSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDA 606
+DE+I AGV P+ K E +++LQ + M GDG+NDA
Sbjct: 689 -----------------IDEVI------AGVLPDGKAEAIKRLQSQGRQVAMVGDGINDA 725
Query: 607 PALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMK 656
PAL +AD+GIA+ +D A + I L L + A+ SRA + MK
Sbjct: 726 PALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMK 775
|
Length = 834 |
| >gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 75.7 bits (187), Expect = 7e-17
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 24 NVDLERIPINEVFEQLKCTRE-GLSNEEGQKRLVIFGPNKLEE-KKESKVLKFLGFMWNP 81
+D + + EV E+L+ E GLS+EE +RL +GPN+L KK S +L+FL NP
Sbjct: 1 ELDWHALSLEEVLERLQTDLEKGLSSEEAARRLERYGPNELPPPKKTSPLLRFLRQFHNP 60
Query: 82 LSWVMEIAAIMAIAL 96
L +++ AA+++ L
Sbjct: 61 LIYILLAAAVLSALL 75
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases. Length = 75 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 82.3 bits (204), Expect = 6e-16
Identities = 78/231 (33%), Positives = 116/231 (50%), Gaps = 24/231 (10%)
Query: 136 ALMAGLAPQTKV-LRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSAL 194
ALMA L P+T LRDG E + L PGDVI + G +PAD +LL D+SAL
Sbjct: 236 ALMA-LVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFA-SFDESAL 293
Query: 195 TGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLT 254
TGES+PV + G++V +G+T + V++ + + HL++ E +
Sbjct: 294 TGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEA--EERRAPIER 351
Query: 255 AIGNFC-ICSIAIGMVIEIIVMY--------PIQHRAYRNGIDNLLVLLIGGIPIAMPTV 305
I F I + AI M++ ++V+ P Q YR L LL+ G P A+ V
Sbjct: 352 FIDRFSRIYTPAI-MLVALLVILVPPLLFAAPWQEWIYRG-----LTLLLIGCPCAL--V 403
Query: 306 LSVTMAIGS--HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTV 354
+S AI S +++GA+ K A+E++ + + DKTGTLT K V
Sbjct: 404 ISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQV 454
|
Length = 741 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 78.1 bits (193), Expect = 1e-14
Identities = 49/160 (30%), Positives = 67/160 (41%), Gaps = 32/160 (20%)
Query: 491 QFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 550
+GL+ L D R D+ + I LG+ M+TGD A LG+
Sbjct: 558 DVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGI---------- 607
Query: 551 LGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALK 610
D AG+ PE K + V +L + + M GDG+NDAPA+K
Sbjct: 608 ---------------------DFRAGLLPEDKVKAVTELNQHAPL-AMVGDGINDAPAMK 645
Query: 611 KADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRA 650
A IGIA+ TD A +D LT L + + SRA
Sbjct: 646 AASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRA 685
|
Length = 741 |
| >gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 63.3 bits (155), Expect = 1e-12
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 29 RIPINEVFEQLKCTRE-GLSNEEGQKRLVIFGPNKL-EEKKESKVLKFLGFMWNPLSWVM 86
+ + EV +L E GL+ E ++RL +GPN+L E+K +S FL +PL ++
Sbjct: 3 TLSVEEVLARLGTDLEKGLTEAEAEERLEKYGPNELPEKKPKSLWKIFLRQFKDPLVIIL 62
Query: 87 EIAAIMA 93
IAAI++
Sbjct: 63 LIAAIVS 69
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. Length = 69 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 52.2 bits (125), Expect = 8e-08
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 552 GQIKD-ANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALK 610
G + A +PV+ + FAG PE K +I+R+L++R M G+G ND AL+
Sbjct: 57 GSLVQLAEFVGIPVERV------FAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALR 110
Query: 611 KADIGIAV---ADATDAARGASDIVLTEPGLSVIVSA 644
+AD+GI + +D+VL E + +
Sbjct: 111 EADLGICTIQQEGVPERLLLTADVVLKEIAEILDLLK 147
|
Length = 152 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 52.3 bits (125), Expect = 1e-07
Identities = 29/121 (23%), Positives = 47/121 (38%), Gaps = 19/121 (15%)
Query: 493 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLG 552
+GL+ L DP + E ++ G+ + ++TGD A R LG+ + +
Sbjct: 86 LGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGL-----FDALVSA 140
Query: 553 QIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKA 612
+ P ++ E A + +L + M GDGVND PA K A
Sbjct: 141 DLYGLVGVGKPDPKIFELA--------------LEELGVKPEEVLMVGDGVNDIPAAKAA 186
Query: 613 D 613
Sbjct: 187 G 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 2e-07
Identities = 59/219 (26%), Positives = 99/219 (45%), Gaps = 20/219 (9%)
Query: 141 LAPQT-KVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTGESL 199
L P T +V+ D + + + PG ++ + GD +P D + G+ +D++ LTGE +
Sbjct: 320 LTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGEAW-LDEAMLTGEPI 378
Query: 200 PVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV----DSTNQEGHFQKVLTA 255
P K GD V +G+ + G + A G HT + +V S + G ++A
Sbjct: 379 PQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISA 438
Query: 256 IGNFCICSIAIGMVIEIIVMY--PIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVT--MA 311
+ F + I +V I + P Y LV+ + IA P L + M+
Sbjct: 439 V--FVPVVVVIALVSAAIWYFFGPAPQIVYT------LVIATTVLIIACPCALGLATPMS 490
Query: 312 I--GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLT 348
I G R ++ G + + A++ + +D L DKTGTLT
Sbjct: 491 IISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLT 529
|
Length = 834 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 6e-04
Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 11/96 (11%)
Query: 558 NISALPVDELIEKADGFAG------VFPEHKYEIVRKLQERKHI----CGMTGDGVNDAP 607
+ A + L + G V +K + + L ++ I GDG ND
Sbjct: 123 GLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLS 182
Query: 608 ALKKADIGIAVADATDAARGASDIVLTEPGLSVIVS 643
+K A +GIA +A + +DI + + L+ I+
Sbjct: 183 MIKAAGLGIAF-NAKPKLQQKADICINKKDLTDILP 217
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 8e-04
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 394 MLGDAKEARAGITELHFLPFNPVEKR-TAITYIDSDGSWHRISKGAPEQIIELCN 447
+ D +E RA + +PFN KR + + ++ D + KGAPE+I+E C+
Sbjct: 35 LGIDVEELRARYPRVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGAPERILERCS 89
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|234910 PRK01158, PRK01158, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 0.001
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 600 GDGVNDAPALKKADIGIAVADATDAARGASDIVLTEP 636
GD ND + A G+AVA+A + + A+D V +
Sbjct: 180 GDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKS 216
|
Length = 230 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 962 | |||
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.93 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.6 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.39 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 99.31 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.15 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 98.99 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.88 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.85 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.8 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.78 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.76 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 98.74 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.71 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.68 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.66 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.62 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.61 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.6 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.56 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.53 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.45 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.44 | |
| PLN02887 | 580 | hydrolase family protein | 98.43 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.4 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.4 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.34 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.33 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.33 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.25 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.25 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.24 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.21 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.16 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.14 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.13 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.11 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.03 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.93 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.91 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.83 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.82 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 97.81 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.71 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.63 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.57 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.51 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 97.49 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.34 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.29 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.26 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.23 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.21 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.17 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 96.99 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 96.97 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.95 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.95 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 96.87 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 96.85 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 96.78 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.73 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.66 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 96.64 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.61 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.46 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.42 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 96.41 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.36 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 96.34 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.26 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.22 | |
| PRK06769 | 173 | hypothetical protein; Validated | 96.16 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.11 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.08 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 95.97 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 95.9 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 95.81 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 95.76 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 95.67 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 95.66 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 95.45 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 95.42 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 95.29 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 95.25 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 95.2 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 95.15 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 95.1 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 95.01 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 94.86 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 94.73 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 94.69 | |
| PLN02940 | 382 | riboflavin kinase | 94.6 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 94.54 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 94.52 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 94.21 | |
| PLN02811 | 220 | hydrolase | 94.08 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 93.87 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 93.45 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 93.37 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 93.26 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 93.23 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 93.0 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 92.51 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 92.35 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 92.31 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 92.24 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 92.23 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 91.59 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 91.39 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 90.84 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 90.68 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 90.19 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 90.13 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 89.93 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 89.92 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 88.72 | |
| PLN02580 | 384 | trehalose-phosphatase | 87.9 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 87.64 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 87.16 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 86.84 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 86.61 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 86.27 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 86.12 | |
| PLN03017 | 366 | trehalose-phosphatase | 84.66 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 83.21 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 82.86 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 82.39 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 82.3 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 82.04 |
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-193 Score=1581.88 Aligned_cols=935 Identities=86% Similarity=1.320 Sum_probs=921.2
Q ss_pred hhhhhhcccccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCccccchHHHHHHhhhhhHHHHHHHHHHHHHHH
Q 044543 17 LEEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKKESKVLKFLGFMWNPLSWVMEIAAIMAIAL 96 (962)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~~l~~~ail~~~l 96 (962)
++++++|.+|++.+|.|||+++|+|+.+|||++|+++|+++||+|+++++|++.+++|+.+||+|++|+|+.+|++++.+
T Consensus 8 ~~di~~E~vdl~~~p~eeVfeeL~~t~~GLt~~E~~eRlk~fG~NkleEkken~~lKFl~Fm~~PlswVMEaAAimA~~L 87 (942)
T KOG0205|consen 8 LEDIKKEQVDLEAIPIEEVFEELLCTREGLTSDEVEERLKIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIGL 87 (942)
T ss_pred hhhhhhhccccccCchhhhHHHHhcCCCCCchHHHHHHHHhhCchhhhhhhhhHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCeee
Q 044543 97 ANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIP 176 (962)
Q Consensus 97 ~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VP 176 (962)
.++++.+++|.|+++|+.++++|++++|+||++++++.++|++.++++++|+|||+|.++++++||||||+.|+.||+||
T Consensus 88 ang~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiP 167 (942)
T KOG0205|consen 88 ANGGGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIP 167 (942)
T ss_pred hcCCCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEecCCeeEecccccCCCeeeecCCCCcccccceeecceEEEEEEEecchhHHHhHHHhhhccCCCChHHHHHHHH
Q 044543 177 ADARLLDGDPLKIDQSALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTAI 256 (962)
Q Consensus 177 aD~~ll~g~~~~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~l~~~~~~i 256 (962)
||++|++|+.++||+|+|||||.|++|++||.+|+||+|++|++.++|++||.+|++||.+++++++++.+|||+.++.|
T Consensus 168 aDaRLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVdst~~~GHFqkVLt~I 247 (942)
T KOG0205|consen 168 ADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTGI 247 (942)
T ss_pred CccceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcCCCCcccHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCcccccCchHHhhcCc
Q 044543 257 GNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 336 (962)
Q Consensus 257 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v 336 (962)
+++|++++++++++.++++|+.+++.|+..+.+.+++++..||++||.++++++++|+++|+++|+++|+++++|+|+.+
T Consensus 248 Gn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGm 327 (942)
T KOG0205|consen 248 GNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGM 327 (942)
T ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEecccccccCCceEEEEEeeeecccCCChHHHHHHHHHhccccCCChHHHHHHHhhcChhhhhcCceEeeecCCCCC
Q 044543 337 DVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPV 416 (962)
Q Consensus 337 ~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pF~s~ 416 (962)
|++|+|||||||.|+++|.+..++.+.++.++++++..|+++++.+++|++|.|++++++||++++.+|++++++||||+
T Consensus 328 dVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevhF~PFnPV 407 (942)
T KOG0205|consen 328 DVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEVHFLPFNPV 407 (942)
T ss_pred eEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEeeccCCcc
Confidence 99999999999999999999888889999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEEcCCCCEEEEEeCcHHHHHHHhccchHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEe
Q 044543 417 EKRTAITYIDSDGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLL 496 (962)
Q Consensus 417 ~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i 496 (962)
.||.+.+|.++||++++++||||++|+++|+.+.++++++++.+++|+++|+|.|++|++.++++..+..+..|+|+|+.
T Consensus 408 ~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gll 487 (942)
T KOG0205|consen 408 DKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGLL 487 (942)
T ss_pred ccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEe
Q 044543 497 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAG 576 (962)
Q Consensus 497 ~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar 576 (962)
.+.||||+|+.++|++....|++|+|+|||....++++++++|+.+|++++..+.|...++.+.+.++++++++++.||.
T Consensus 488 p~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAg 567 (942)
T KOG0205|consen 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAG 567 (942)
T ss_pred ccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHH
Q 044543 577 VFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMK 656 (962)
Q Consensus 577 vsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~ 656 (962)
+.|+||+++|+.||++||.|+|+|||+||+||||+||+|||+.+++|+||.+||+||++|+++.|+.++..+|.+|+||+
T Consensus 568 VfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~avltSraIfqrmk 647 (942)
T KOG0205|consen 568 VFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMK 647 (942)
T ss_pred cCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHhhhchhccccCCCCCCCCCCccchHHHHHHHHHHHHHHHHH
Q 044543 657 NYTIYAVSITIRIVLGFLLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGTYLAVM 736 (962)
Q Consensus 657 ~~i~~~~~~ni~~~l~~~~~~~~~~~~~~p~~il~i~l~~~~~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 736 (962)
+|.+|+++.++.++++++...+.|.|.|+|++++++.+++|++.|++++|+++|+|.|++|+++++|..++++|.|++++
T Consensus 648 nytiyavsitiriv~gfml~alIw~~df~pfmvliiailnd~t~mtis~d~v~psp~pdswkl~~ifatgvVlgtyma~~ 727 (942)
T KOG0205|consen 648 NYTIYAVSITIRIVFGFMLIALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGTYMAIM 727 (942)
T ss_pred hheeeeehhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCCceEEEEcccCCCCCCCcccchhhhheeeeEehhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccccccccccccCCChhHHHHHHHHHHHHHHHHHHhhhccCCCCcccchhHHHHHHHHHHHHHHHHHHH
Q 044543 737 TVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLERPGLLLIAAFIIAQLVATLIAV 816 (962)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 816 (962)
+..+||..+.+.||+..||+.....+..+...+.|+++++.+++++|++|+++|+|.++|+++++.+++.++++++++++
T Consensus 728 tvif~w~~~~t~ff~~~f~v~~~~~~~~~~~~a~ylqvsi~sqaliFvtrsr~w~~~erpg~~L~~af~~aqliatliav 807 (942)
T KOG0205|consen 728 TVIFFWAAYTTDFFPRTFGVRSLFGNEHELMSALYLQVSIISQALIFVTRSRSWSFVERPGWLLLIAFFAAQLIATLIAV 807 (942)
T ss_pred HHHHhhhhccccccccccceeeccCCHHHHHHhhhhhheehhceeeEEEeccCCccccCcHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888888888999999999999999999999999999999999999999999999999999
Q ss_pred hhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhhhcccccccccCCchhhhhhHHHhhhhhc
Q 044543 817 YANFGFARIHGIGWGWVGVIWLYSIVFYIPLDVLKFIVRYALTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQRTLH 896 (962)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 896 (962)
|++|.+.+..++.|.|..++|+++++.+++.++.||..|+.+++++|+++++++++++.+++|++++|+.||+.+||++|
T Consensus 808 ya~w~~a~i~~igw~w~gviw~ysi~~y~~ld~~kf~~~y~lsg~a~~~~~~~k~~~~~kk~~~~~~~~a~~~~~qrt~~ 887 (942)
T KOG0205|consen 808 YANWSFARITGIGWGWAGVIWLYSIVFYIPLDILKFIIRYALSGKAWDRLIENKTAFTTKKDYGKEEREAQWALAQRTLH 887 (942)
T ss_pred HheecccceecceeeeeeeEEEEEEEEEEechhhheehhhhhhhhHHHHHhcCcchhhhccccchhhhhhHHHHhhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCccccccccchhhhhHHHHHHHHHhHHHHHhhhhcccccchhhHHhcCCChhhhhhcccC
Q 044543 897 GLHPPETSELLNDKNNYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 962 (962)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 962 (962)
|.+.+++ +++++++++++||+|++||||+|+++||++|++++||+|+|++ |||||
T Consensus 888 ~lq~~~~----------~~~~~~a~~~~~~ae~~r~~e~~~l~g~vesv~klk~~d~~~~-~~~t~ 942 (942)
T KOG0205|consen 888 GLQPPEG----------RELSEIAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETI-QHYTV 942 (942)
T ss_pred ccCCCcc----------chhhHHHHHHhhhhhhhhccchhhhhhhhHhhhhhcccchhhh-hhccC
Confidence 9999851 7899999999999999999999999999999999999999999 89986
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-138 Score=1181.96 Aligned_cols=824 Identities=29% Similarity=0.419 Sum_probs=680.2
Q ss_pred ccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCc-cccchHHHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCC
Q 044543 26 DLERIPINEVFEQLKCT-REGLSNEEGQKRLVIFGPNKLEE-KKESKVLKFLGFMWNPLSWVMEIAAIMAIALANGGGKP 103 (962)
Q Consensus 26 ~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~-~~~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~ 103 (962)
+.|..+.+|++..|.++ ++|||++|+.+|+++||+|+++. ...+.|+++++||.|++..+|+++|++|+++.
T Consensus 3 ~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~------ 76 (972)
T KOG0202|consen 3 EAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA------ 76 (972)
T ss_pred chhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH------
Confidence 45678999999999998 77999999999999999999985 45899999999999999999999999999997
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCeeecceEEEe
Q 044543 104 PDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLD 183 (962)
Q Consensus 104 ~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~ 183 (962)
.|.+++.|.+++++|++++++||||++|++++|+++.++.++|+|+|+.+.+++++|||||||.++.||+||||.||++
T Consensus 77 -~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e 155 (972)
T KOG0202|consen 77 -DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIE 155 (972)
T ss_pred -hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEe
Confidence 8889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeeEecccccCCCeeeecCC--------------CCcccccceeecceEEEEEEEecchhHHHhHHHhhhccC-CCCh
Q 044543 184 GDPLKIDQSALTGESLPVTKMP--------------GDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QEGH 248 (962)
Q Consensus 184 g~~~~Vdes~LTGEs~pv~K~~--------------g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~-~~~~ 248 (962)
..++.||||.|||||.|+.|.. .|++|+||.|..|.+.|+|+.||.+|.+|++.+.++..+ .++|
T Consensus 156 ~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTP 235 (972)
T KOG0202|consen 156 AKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTP 235 (972)
T ss_pred eeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCc
Confidence 9889999999999999999954 257999999999999999999999999999999998875 6899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--Hhh---cc-c---cchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhc
Q 044543 249 FQKVLTAIGNFCICSIAIGMVIEIIV--MYP---IQ-H---RAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQ 319 (962)
Q Consensus 249 l~~~~~~i~~~~~~~i~~~~~~~~~~--~~~---~~-~---~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~ 319 (962)
+|+.++.++..+.-.+.++++..++. .|+ .. + ..+.+.|..++++.+++||++||.+++++++.|.+||+|
T Consensus 236 Lqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMak 315 (972)
T KOG0202|consen 236 LQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAK 315 (972)
T ss_pred HHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHh
Confidence 99999999987653332222222222 221 11 2 334456777899999999999999999999999999999
Q ss_pred CCcccccCchHHhhcCceEEEecccccccCCceEEEEEeeeecc-----------cCCC------------------hH-
Q 044543 320 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFV-----------KDMD------------------KD- 369 (962)
Q Consensus 320 ~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~-----------~~~~------------------~~- 369 (962)
++++||++.++|+||.+++||||||||||+|+|++.+.++.... .+++ .+
T Consensus 316 knaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~ 395 (972)
T KOG0202|consen 316 KNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDL 395 (972)
T ss_pred hhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHH
Confidence 99999999999999999999999999999999999997753111 0011 11
Q ss_pred --HHHHHHHHhccc------c-----CCChHHHHHHHhhc-----Chh---h-----------hhcCceEeeecCCCCCC
Q 044543 370 --TVILYGARASRV------E-----NQDAIDACIVGMLG-----DAK---E-----------ARAGITELHFLPFNPVE 417 (962)
Q Consensus 370 --~~l~~a~~~~~~------~-----~~~~~~~al~~~~~-----~~~---~-----------~~~~~~~l~~~pF~s~~ 417 (962)
+++..++.|+.. . -+.|.|.|+...+. +.. . ....++....+||++++
T Consensus 396 l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdr 475 (972)
T KOG0202|consen 396 LQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDR 475 (972)
T ss_pred HHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeeccccc
Confidence 233444444321 1 24788888876552 111 0 11123445889999999
Q ss_pred ceEEEEEEcCCCC--EEEEEeCcHHHHHHHhcc------------chHHHHHHHHHHHHHHhcCCeEEEEEeecCCC-C-
Q 044543 418 KRTAITYIDSDGS--WHRISKGAPEQIIELCNL------------REDVRNKAHTIIDKFADRGLRSLAVAEQSVPE-K- 481 (962)
Q Consensus 418 kr~sv~~~~~~g~--~~~~~KGa~e~il~~~~~------------~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~-~- 481 (962)
|+|++.+.++.|+ +..|.|||+|.|+++|+. ++..++.+.+...+++++|||+|++|+++.+. .
T Consensus 476 K~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~ 555 (972)
T KOG0202|consen 476 KSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVP 555 (972)
T ss_pred ceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccCh
Confidence 9999999876664 789999999999999953 34668889999999999999999999998763 1
Q ss_pred ---------CCCCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCC--Ccccc
Q 044543 482 ---------TKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--PSSAL 550 (962)
Q Consensus 482 ---------~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~--~~~~l 550 (962)
.+...|.+|+|+|++++.||||++++++|+.|+++||+|+|||||+.+||.+||+++|+..+.. ....+
T Consensus 556 ~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~ 635 (972)
T KOG0202|consen 556 DDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMAL 635 (972)
T ss_pred hhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcccccccc
Confidence 2456789999999999999999999999999999999999999999999999999999976533 44667
Q ss_pred cccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEcc-CchHHHHhcc
Q 044543 551 LGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARGAS 629 (962)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg-~gt~~a~~aa 629 (962)
+|.+.+ .++++++++...+..+|+|++|.||.+||+.||++|.+|+|||||+||+||||.|||||||| +|||+||+||
T Consensus 636 TG~efD-~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAs 714 (972)
T KOG0202|consen 636 TGSEFD-DLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEAS 714 (972)
T ss_pred chhhhh-cCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhh
Confidence 777665 78889999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred cccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhhcCCchHHHHHHHHHHhhhc-hhccccCC
Q 044543 630 DIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGF-LLIALIWKFDFSPFMVLIIAILNDGT-IMTISKDR 707 (962)
Q Consensus 630 Divl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~-~~~~~~~~~~~~p~~il~i~l~~~~~-~~~l~~d~ 707 (962)
|+||.||||++|+.||++||.+|+||++|+.|.++.|+..+..+ +...|..++++.|+|+||+|+++|++ ++++|+++
T Consensus 715 DMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep 794 (972)
T KOG0202|consen 715 DMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEP 794 (972)
T ss_pred hcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCC
Confidence 99999999999999999999999999999999999999776654 44567789999999999999999997 69999988
Q ss_pred CCCC---CCCCc----cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----ccc-cccc--------ccccCCChhHH
Q 044543 708 VKPS---PVPDT----WKLKEIFATGIVLGTYLAVMTVLFFWAIHSST-----FFS-EKFG--------VRSIRDSPHEL 766 (962)
Q Consensus 708 ~~~~---~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-----~~~-~~~g--------~~~~~~~~~~~ 766 (962)
++++ ++|++ ...+.++..++.+|.|+.+.++..|++-+... +.. .+|. .+.-.-.....
T Consensus 795 ~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~~ 874 (972)
T KOG0202|consen 795 VDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRCAVFEDMCP 874 (972)
T ss_pred CChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhcccccccchhhhccccc
Confidence 7654 22332 33455666667789999998886554433211 000 0000 00000000112
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCcccch---hHHHHHHHHHHHHHHHHHHHhhc--cccccccchhHHHHHHHHHHHH
Q 044543 767 TAAVYLQVSIVSQALIFVTRSRSWSFLERP---GLLLIAAFIIAQLVATLIAVYAN--FGFARIHGIGWGWVGVIWLYSI 841 (962)
Q Consensus 767 ~t~~~~~~~~~~~~~~~~~r~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 841 (962)
.|+.|..++++..++.++.++++.+.+..| |.|+++++.++.+...++ +|.+ ...+++.+++|.-|++++.+++
T Consensus 875 ~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~i-lYvp~l~~iFq~~~l~~~ew~~vl~~s~ 953 (972)
T KOG0202|consen 875 LTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLV-LYVPPLQRIFQTEPLSLAEWLLVLAISS 953 (972)
T ss_pred ceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhheE-EEechhhhhheecCCcHHHHHHHHHHhh
Confidence 377788888999999999999886644332 448888888887655443 6654 2345677888877777789999
Q ss_pred HHHHHHHHHHHHHHHhc
Q 044543 842 VFYIPLDVLKFIVRYAL 858 (962)
Q Consensus 842 ~~~~~~~~~K~~~r~~~ 858 (962)
..++++|++|++.|++.
T Consensus 954 ~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 954 PVIIVDEILKFIARNYF 970 (972)
T ss_pred hhhhHHHHHHHHHHhcc
Confidence 99999999999999875
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-131 Score=1205.99 Aligned_cols=752 Identities=59% Similarity=0.946 Sum_probs=675.5
Q ss_pred CCCHHHHHHHHhhcCCCccCccccchHHHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCCCChhhHHHHHHHHHHHHHHHH
Q 044543 45 GLSNEEGQKRLVIFGPNKLEEKKESKVLKFLGFMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISF 124 (962)
Q Consensus 45 GLt~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i~~ 124 (962)
|||++|+++|+++||+|+++.++++.|+.|+++|++|++|+++++++++++++ +|.+++.|++++++++.+++
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~-------~~~~~~~i~~~~~i~~~i~~ 73 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE-------NWVDFVIILGLLLLNATIGF 73 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc-------chhhhhhhhhhhHHHHHHHH
Confidence 89999999999999999999888888999999999999999999999999975 89999999999999999999
Q ss_pred HHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCeeecceEEEecCCeeEecccccCCCeeeecC
Q 044543 125 IEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTKM 204 (962)
Q Consensus 125 ~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~ 204 (962)
+||++++++.++|++..+++++|+|||++++|+++||||||+|.|++||+|||||+|++|+++.||||+|||||.|+.|.
T Consensus 74 ~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 74 IEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccceEec
Confidence 99999999999999999999999999999999999999999999999999999999999977999999999999999999
Q ss_pred CCCcccccceeecceEEEEEEEecchhHHHhHHHhhhccC-CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccch
Q 044543 205 PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAY 283 (962)
Q Consensus 205 ~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~-~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~ 283 (962)
+||.+|+||.+.+|+++++|++||.+|.+||+++++++++ +++++|+.+++++.+++.++++++++.+++++...+.++
T Consensus 154 ~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~ 233 (755)
T TIGR01647 154 TGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233 (755)
T ss_pred cCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 9999999999999999999999999999999999998875 677999999999988766555544444443433356778
Q ss_pred HhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCcccccCchHHhhcCceEEEecccccccCCceEEEEEeeeecc
Q 044543 284 RNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFV 363 (962)
Q Consensus 284 ~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~ 363 (962)
..++..++++++++|||+||++++++++.|+++|+++|+++|+++++|+||++|+||||||||||+|+|+|.+... ..
T Consensus 234 ~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~--~~ 311 (755)
T TIGR01647 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILP--FF 311 (755)
T ss_pred HHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEe--cC
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999998763 22
Q ss_pred cCCChHHHHHHHHHhccccCCChHHHHHHHhhcChhhhhcCceEeeecCCCCCCceEEEEEEcCC-CCEEEEEeCcHHHH
Q 044543 364 KDMDKDTVILYGARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSD-GSWHRISKGAPEQI 442 (962)
Q Consensus 364 ~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~-g~~~~~~KGa~e~i 442 (962)
.+.++++++.+++.++....+||+|.|+++++.+....+..++.++.+||+|.+|+|++++.+++ |+.+.++||+||.+
T Consensus 312 ~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~i 391 (755)
T TIGR01647 312 NGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVI 391 (755)
T ss_pred CCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHH
Confidence 23667788888887765566799999999988765545667888999999999999999987654 77888999999999
Q ss_pred HHHhccchHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEE
Q 044543 443 IELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKM 522 (962)
Q Consensus 443 l~~~~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~m 522 (962)
+++|++..+.++++++.+++++.+|+|++++||++ .|++|+|+|+++++||||+|++++|++||++||+|+|
T Consensus 392 l~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~--------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~m 463 (755)
T TIGR01647 392 LDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD--------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463 (755)
T ss_pred HHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc--------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEE
Confidence 99998777777888899999999999999999973 2678999999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCC
Q 044543 523 ITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDG 602 (962)
Q Consensus 523 iTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG 602 (962)
+|||++.||.++|+++||..+......+......+.++++++++.+++.++|||++|+||+++|+.||++|++|+|+|||
T Consensus 464 iTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDG 543 (755)
T TIGR01647 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDG 543 (755)
T ss_pred ECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 99999999999999999976443333333333334677889999999999999999999999999999999999999999
Q ss_pred cCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 044543 603 VNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIALIWKF 682 (962)
Q Consensus 603 ~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~~~~~~~ 682 (962)
+||+|||++||||||||+|+|+||++||+||++|+|++|+.++++||++|+||++|+.|.++.|+..++.++...+++++
T Consensus 544 vNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~ 623 (755)
T TIGR01647 544 VNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNF 623 (755)
T ss_pred cccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999988777777777788
Q ss_pred CchHHHHHHHHHHhhhchhccccCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccCCC
Q 044543 683 DFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGTYLAVMTVLFFWAIHSSTFFSEKFGVRSIRDS 762 (962)
Q Consensus 683 ~~~p~~il~i~l~~~~~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 762 (962)
+++|+|++|+|+++|++.+++++|+++|+++|++|...+++..+++.|+++++.++++||+.+.+.++...++. ...
T Consensus 624 ~l~~~~il~~~l~~d~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 700 (755)
T TIGR01647 624 YFPPIMVVIIAILNDGTIMTIAYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGL---QLL 700 (755)
T ss_pred chhHHHHHHHHHHHhHhHhhccCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccc---ccc
Confidence 89999999999999999999999999999999999999999999999999999999888776642222111111 113
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhccCCCCcccchhHHHHHHHHHHHHHHHHHHH
Q 044543 763 PHELTAAVYLQVSIVSQALIFVTRSRSWSFLERPGLLLIAAFIIAQLVATLIAV 816 (962)
Q Consensus 763 ~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 816 (962)
..+.+|++|+.+++.+++++|+.|+++.+|.++|++++++++++.++++++++.
T Consensus 701 ~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~ 754 (755)
T TIGR01647 701 HGNLQSLIYLQVSISGQATIFVTRTHGFFWSERPGKLLFIAFVIAQIIATFIAV 754 (755)
T ss_pred HhhhHHHHHHHHHHHHHHHHheeccCCCCcccCCcHHHHHHHHHHHHHHHHHhh
Confidence 456889999999999999999999999999999999999999999988877754
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-129 Score=1222.01 Aligned_cols=819 Identities=26% Similarity=0.389 Sum_probs=673.7
Q ss_pred ccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-cchHHHHHHhhhhhHHHHHHHHHHHHHHHHcCCC
Q 044543 24 NVDLERIPINEVFEQLKCT-REGLSNEEGQKRLVIFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEIAAIMAIALANGGG 101 (962)
Q Consensus 24 ~~~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~ 101 (962)
--|+|..+.+|+++.|+++ .+|||++|+++|+++||+|+++.++ .++|+.|++||++|+.++++++++++++++
T Consensus 4 ~~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~---- 79 (1053)
T TIGR01523 4 FNAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH---- 79 (1053)
T ss_pred CCchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh----
Confidence 3578999999999999998 5899999999999999999999765 688999999999999999999999999975
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCeeecceEE
Q 044543 102 KPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARL 181 (962)
Q Consensus 102 ~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~l 181 (962)
+|.++++|++++++|++++++||+++++++++|+++.+++++|+|||++++|+++||||||||.|++||+|||||+|
T Consensus 80 ---~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rL 156 (1053)
T TIGR01523 80 ---DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRL 156 (1053)
T ss_pred ---hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCeeEecccccCCCeeeecCCC---------------CcccccceeecceEEEEEEEecchhHHHhHHHhhhccC--
Q 044543 182 LDGDPLKIDQSALTGESLPVTKMPG---------------DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-- 244 (962)
Q Consensus 182 l~g~~~~Vdes~LTGEs~pv~K~~g---------------~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~-- 244 (962)
++++++.||||+|||||.|+.|.+. |++|+||.|.+|++.++|++||.+|++||+++++++..
T Consensus 157 i~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~ 236 (1053)
T TIGR01523 157 IETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGL 236 (1053)
T ss_pred EEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhc
Confidence 9998899999999999999999742 57899999999999999999999999999999886432
Q ss_pred ----------------------------------CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHH
Q 044543 245 ----------------------------------QEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNL 290 (962)
Q Consensus 245 ----------------------------------~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (962)
.++|+|+.+++++.++..+.++++++.+++.+. ..+...+..+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~---~~~~~~~~~a 313 (1053)
T TIGR01523 237 FQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF---DVDKEVAIYA 313 (1053)
T ss_pred cccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhhHHHHHHH
Confidence 138999999999887554433322222221111 1124566778
Q ss_pred HHHHHhccCCchHHHHHHHHHHHHHHHhcCCcccccCchHHhhcCceEEEecccccccCCceEEEEEeeee---c-----
Q 044543 291 LVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEV---F----- 362 (962)
Q Consensus 291 l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~---~----- 362 (962)
++++++++|++||+++++++++|++||++++++||+++++|+||++++||+|||||||+|+|+|++.+... +
T Consensus 314 v~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~ 393 (1053)
T TIGR01523 314 ICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNS 393 (1053)
T ss_pred HHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999876421 0
Q ss_pred ccCC---------------------------------------C---------hHHHHHHHHHhccc------------c
Q 044543 363 VKDM---------------------------------------D---------KDTVILYGARASRV------------E 382 (962)
Q Consensus 363 ~~~~---------------------------------------~---------~~~~l~~a~~~~~~------------~ 382 (962)
..++ + ...++..++.|+.. .
T Consensus 394 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~ 473 (1053)
T TIGR01523 394 DDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKA 473 (1053)
T ss_pred CCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCceee
Confidence 0000 0 01245555555421 1
Q ss_pred CCChHHHHHHHhhcChh----------hh-------------------hcCceEeeecCCCCCCceEEEEEEcCCC-CEE
Q 044543 383 NQDAIDACIVGMLGDAK----------EA-------------------RAGITELHFLPFNPVEKRTAITYIDSDG-SWH 432 (962)
Q Consensus 383 ~~~~~~~al~~~~~~~~----------~~-------------------~~~~~~l~~~pF~s~~kr~sv~~~~~~g-~~~ 432 (962)
.+||+|.|++.++.... +. +..|+.++.+||+|.+|||++++++++| +++
T Consensus 474 ~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~ 553 (1053)
T TIGR01523 474 HGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYN 553 (1053)
T ss_pred CcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEE
Confidence 25999999988763111 11 2347789999999999999999987655 478
Q ss_pred EEEeCcHHHHHHHhcc------------chHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCC------------CCCCCC
Q 044543 433 RISKGAPEQIIELCNL------------REDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKT------------KESPGG 488 (962)
Q Consensus 433 ~~~KGa~e~il~~~~~------------~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~------------~~~~e~ 488 (962)
+|+|||||.|+++|+. +++.++++.+.+++|+++|+|||++|||.+++++ ++..|+
T Consensus 554 ~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~ 633 (1053)
T TIGR01523 554 IYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAES 633 (1053)
T ss_pred EEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhcc
Confidence 9999999999999963 2345677888899999999999999999886532 234688
Q ss_pred CceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCC--------CcccccccchhccCC
Q 044543 489 PWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--------PSSALLGQIKDANIS 560 (962)
Q Consensus 489 ~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~--------~~~~l~~~~~~~~~~ 560 (962)
+|+|+|+++++||||+|++++|++|+++||+|+|+|||++.||.+||++|||.++.. ...+++|.+.+ .++
T Consensus 634 ~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~-~l~ 712 (1053)
T TIGR01523 634 DLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFD-ALS 712 (1053)
T ss_pred CCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhh-hcC
Confidence 999999999999999999999999999999999999999999999999999974311 12456666554 577
Q ss_pred cchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEcc-CchHHHHhcccccccCCCch
Q 044543 561 ALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLS 639 (962)
Q Consensus 561 ~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg-~gt~~a~~aaDivl~~~~~~ 639 (962)
++++++++++..||||++|+||.++|+.+|++|++|+|||||+||+||||+|||||||| +|+|+|+++||++|++++|+
T Consensus 713 ~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~ 792 (1053)
T TIGR01523 713 DEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFA 792 (1053)
T ss_pred HHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHH
Confidence 78889999999999999999999999999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------cCCchHHHHHHHHHHhhhc-hhccccCCCCCC-
Q 044543 640 VIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIALIW------KFDFSPFMVLIIAILNDGT-IMTISKDRVKPS- 711 (962)
Q Consensus 640 ~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~~~~~------~~~~~p~~il~i~l~~~~~-~~~l~~d~~~~~- 711 (962)
+|+.++.+||++|+|++|++.|.+++|+..++.+++..++. ++||+|+|++|+|+++|++ ++++++|++.+.
T Consensus 793 ~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~~ 872 (1053)
T TIGR01523 793 SILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDL 872 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChhH
Confidence 99999999999999999999999999998887776665542 3689999999999999975 699999876543
Q ss_pred ----CC--CCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc--------cccccccCCChhHHHHHHHHHHHHH
Q 044543 712 ----PV--PDTWKLKEIFATGIVLGTYLAVMTVLFFWAIHSSTFFSE--------KFGVRSIRDSPHELTAAVYLQVSIV 777 (962)
Q Consensus 712 ----~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--------~~g~~~~~~~~~~~~t~~~~~~~~~ 777 (962)
|+ .++...+.++..++++|+++++++++.|++.+.. +..+ .++.. . ....+.+|+.|.+++++
T Consensus 873 m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~-~-~~~~~a~t~~f~~l~~~ 949 (1053)
T TIGR01523 873 MDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYG-FGSGNLGHDCDAHYHAG-C-NDVFKARSAAFATMTFC 949 (1053)
T ss_pred HhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccccccccccccc-c-cchhhhHHHHHHHHHHH
Confidence 12 1233345566667888999999888776654321 1000 01100 0 12456789999999999
Q ss_pred HHHHHhhhccCCCCccc------------------chhHHHHHHHHHHHHHHHHHHHhhc-c--ccccccchhHHHHHHH
Q 044543 778 SQALIFVTRSRSWSFLE------------------RPGLLLIAAFIIAQLVATLIAVYAN-F--GFARIHGIGWGWVGVI 836 (962)
Q Consensus 778 ~~~~~~~~r~~~~~~~~------------------~~~~~l~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~ 836 (962)
+.+++|++|+.+.+.+. ..|.+++++++++.++..++ +|.+ . .++.+.+++|.|++ +
T Consensus 950 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~-~~~p~~~~~~f~~~~l~~~w~~-~ 1027 (1053)
T TIGR01523 950 ALILAVEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPT-IYIPVINDDVFKHKPIGAEWGL-A 1027 (1053)
T ss_pred HHHHHHHHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHH-HhhhhhhhhhhccCCcchHHHH-H
Confidence 99999999997633221 13457777777766654333 4543 2 26677788886655 5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc
Q 044543 837 WLYSIVFYIPLDVLKFIVRYAL 858 (962)
Q Consensus 837 ~~~~~~~~~~~~~~K~~~r~~~ 858 (962)
++++++.++..|++|++.|++.
T Consensus 1028 ~~~~~~~~~~~e~~K~~~r~~~ 1049 (1053)
T TIGR01523 1028 AAATIAFFFGAEIWKCGKRRLF 1049 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc
Confidence 7888888999999999877664
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-130 Score=1218.66 Aligned_cols=806 Identities=31% Similarity=0.489 Sum_probs=675.6
Q ss_pred cccccccCCHH--HHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-cchHHHHHHhhhhhHHHHHHHHHHHHHHHHc
Q 044543 23 ENVDLERIPIN--EVFEQLKCT-REGLSNEEGQKRLVIFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEIAAIMAIALAN 98 (962)
Q Consensus 23 ~~~~~~~~~~~--~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~ 98 (962)
....+|..+.+ ++...+.++ .+||+++|+.+|+++||+|++++.+ .+.|..|+.+|++|+.++++++++++++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~- 97 (917)
T COG0474 19 TSETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVG- 97 (917)
T ss_pred CcccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 34567777777 999999887 7799999999999999999999654 688999999999999999999999999986
Q ss_pred CCCCCCCh----hhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCe
Q 044543 99 GGGKPPDW----QDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDI 174 (962)
Q Consensus 99 ~~~~~~~~----~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~ 174 (962)
.| .++..|+.++++|++++++||+++++++++|++..+++++|+|||++++|++++|||||||.+++||+
T Consensus 98 ------~~~~~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~ 171 (917)
T COG0474 98 ------DWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDV 171 (917)
T ss_pred ------cccccCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCc
Confidence 66 56678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecceEEEecCCeeEecccccCCCeeeecCC--------------CCcccccceeecceEEEEEEEecchhHHHhHHHhh
Q 044543 175 IPADARLLDGDPLKIDQSALTGESLPVTKMP--------------GDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 240 (962)
Q Consensus 175 VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~--------------g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~ 240 (962)
||||++|+++++++||||+|||||.|+.|.+ .|++|+||.+++|++.++|++||.+|++||++.++
T Consensus 172 vPAD~rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~ 251 (917)
T COG0474 172 VPADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLL 251 (917)
T ss_pred cccceEEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhh
Confidence 9999999999888999999999999999963 47899999999999999999999999999999999
Q ss_pred hcc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhc
Q 044543 241 DST-NQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQ 319 (962)
Q Consensus 241 ~~~-~~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~ 319 (962)
... ...+++|+.+++++.+++.+.+++.++.+++.++..+..|...+..++++++++||++||+.++++++.|+.+|++
T Consensus 252 ~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak 331 (917)
T COG0474 252 PTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAK 331 (917)
T ss_pred ccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHh
Confidence 988 6899999999999988766655544444444433323448899999999999999999999999999999999999
Q ss_pred CCcccccCchHHhhcCceEEEecccccccCCceEEEEEeeeecccCCC---------hHHHHHHHHHhcccc--------
Q 044543 320 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMD---------KDTVILYGARASRVE-------- 382 (962)
Q Consensus 320 ~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~---------~~~~l~~a~~~~~~~-------- 382 (962)
+++++|+++++|+||++|+||||||||||+|+|+|+++++.....+.+ ...++..++.|+...
T Consensus 332 ~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~ 411 (917)
T COG0474 332 DNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQ 411 (917)
T ss_pred ccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCcee
Confidence 999999999999999999999999999999999999998752111222 112456666666322
Q ss_pred CCChHHHHHHHhhcC------hhhhhcCceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhcc-------c
Q 044543 383 NQDAIDACIVGMLGD------AKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNL-------R 449 (962)
Q Consensus 383 ~~~~~~~al~~~~~~------~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~-------~ 449 (962)
.+||+|.|++..+.+ .......+++++.+||+|+||||++++++.+|+++.++|||||.|+++|+. .
T Consensus 412 ~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~ 491 (917)
T COG0474 412 AGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLT 491 (917)
T ss_pred cCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccC
Confidence 359999999998853 333455667799999999999999999977888999999999999999973 4
Q ss_pred hHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCC----CCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcC
Q 044543 450 EDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTK----ESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITG 525 (962)
Q Consensus 450 ~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~----~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTG 525 (962)
++.++.+.+..++|+++|+|+|++|||..+..+. +..|++|+|+|+++|+||||+|+++||+.|++|||+||||||
T Consensus 492 ~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTG 571 (917)
T COG0474 492 EEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITG 571 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECC
Confidence 5677889999999999999999999998766544 578999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCC
Q 044543 526 DQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVND 605 (962)
Q Consensus 526 D~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND 605 (962)
||+.||++||++||+..+.....+++|.+.+ .++++++.+.+++.+||||+||+||+++|+.||++||+|+|||||+||
T Consensus 572 D~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~-~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvND 650 (917)
T COG0474 572 DHVETAIAIAKECGIEAEAESALVIDGAELD-ALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVND 650 (917)
T ss_pred CCHHHHHHHHHHcCCCCCCCceeEeehHHhh-hcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchh
Confidence 9999999999999997664334466776655 667778999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCeeEEcc-CchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hc-C
Q 044543 606 APALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIALI-WK-F 682 (962)
Q Consensus 606 ~~aLk~AdVGIamg-~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~~~~-~~-~ 682 (962)
+||||+|||||||| +|+|+||+|||+++++++|..|+.+|++||++|+|++|++.|.+++|+..++.++++.++ .+ +
T Consensus 651 apALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~ 730 (917)
T COG0474 651 APALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFL 730 (917)
T ss_pred HHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999998 899999999999999999999999999999999999999999999999877766666554 44 5
Q ss_pred CchHHHHHHHHHHhhhc-hhccccCCC------CCCCCCCc--cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 044543 683 DFSPFMVLIIAILNDGT-IMTISKDRV------KPSPVPDT--WKLKEIFATGIVLGTYLAVMTVLFFWAIHSSTFFSEK 753 (962)
Q Consensus 683 ~~~p~~il~i~l~~~~~-~~~l~~d~~------~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 753 (962)
||.|+|++|+|+++|++ +++++.++. +|++.|.. |+.+.++.+++..|...++++++.|++.+.... ...
T Consensus 731 p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~-~~~ 809 (917)
T COG0474 731 PLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFI-ANT 809 (917)
T ss_pred cHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccc
Confidence 89999999999999996 688877642 22234555 777777777888788888888877766653211 111
Q ss_pred ccccccCCChhHHHHHHHHHHHHHHHHHHhhhccCCCCcccc---hhHHHHHHHHHHHHHHHHHHHhhcc--ccccccch
Q 044543 754 FGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLER---PGLLLIAAFIIAQLVATLIAVYANF--GFARIHGI 828 (962)
Q Consensus 754 ~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 828 (962)
.+... ......++.|+.++++++++.+..|+.+.++++. +++.+++++++..++..++.++... ..+...++
T Consensus 810 ~~~~~---~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~~~~ 886 (917)
T COG0474 810 LGLDL---FQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPL 886 (917)
T ss_pred cchhh---HHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhhhccCCCC
Confidence 11000 1566789999999999999999999987555544 4556666666655555444333221 23445555
Q ss_pred hHHHHHHHHHHH
Q 044543 829 GWGWVGVIWLYS 840 (962)
Q Consensus 829 ~~~~~~~~~~~~ 840 (962)
++.-|+++..+.
T Consensus 887 ~~~~~~~~~~~~ 898 (917)
T COG0474 887 SLFEWLIAIAVA 898 (917)
T ss_pred cHHHHHHHHHHH
Confidence 544333333333
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-129 Score=1201.41 Aligned_cols=805 Identities=26% Similarity=0.412 Sum_probs=676.4
Q ss_pred ccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccc-chHHHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCCC
Q 044543 26 DLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKKE-SKVLKFLGFMWNPLSWVMEIAAIMAIALANGGGKPP 104 (962)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~i~~~~~-~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~ 104 (962)
..+..+.+|+++.|+++.+|||++|+++|+++||+|+++.+++ ++|+.|+++|++|++++++++++++++++
T Consensus 48 ~~~~~~~~~v~~~l~~~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~------- 120 (902)
T PRK10517 48 KAAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE------- 120 (902)
T ss_pred HHHcCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc-------
Confidence 4557899999999999999999999999999999999998765 57899999999999999999999999975
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEEC------CeEEEEECcCcCCCcEEEEeCCCeeecc
Q 044543 105 DWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRD------GAWREQEASILVPGDVISIKLGDIIPAD 178 (962)
Q Consensus 105 ~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rd------g~~~~i~~~~Lv~GDiI~l~~Gd~VPaD 178 (962)
+|.++++|+++++++.++++++|+|++++.++|+++.+++++|+|| |++++|++++|||||+|.|++||+||||
T Consensus 121 ~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaD 200 (902)
T PRK10517 121 DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPAD 200 (902)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeee
Confidence 8999999999999999999999999999999999999999999999 7899999999999999999999999999
Q ss_pred eEEEecCCeeEecccccCCCeeeecCCCC-------------cccccceeecceEEEEEEEecchhHHHhHHHhhhcc-C
Q 044543 179 ARLLDGDPLKIDQSALTGESLPVTKMPGD-------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-N 244 (962)
Q Consensus 179 ~~ll~g~~~~Vdes~LTGEs~pv~K~~g~-------------~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~ 244 (962)
|+|++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|+++++|++||.+|.+||++++++++ .
T Consensus 201 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~ 280 (902)
T PRK10517 201 LRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDS 280 (902)
T ss_pred EEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCC
Confidence 99999988999999999999999999874 799999999999999999999999999999999876 5
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCccc
Q 044543 245 QEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 324 (962)
Q Consensus 245 ~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilv 324 (962)
+++++|+.+++++++++.+.++++.+.+++ +...+.+|..++..++++++++|||+||++++++++.|+.+|+++|+++
T Consensus 281 ~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i-~~~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilV 359 (902)
T PRK10517 281 EPNAFQQGISRVSWLLIRFMLVMAPVVLLI-NGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIV 359 (902)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhhhH-HHHhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEE
Confidence 789999999999887655444333332222 2223457888999999999999999999999999999999999999999
Q ss_pred ccCchHHhhcCceEEEecccccccCCceEEEEEeeeecccCCChHHHHHHHHHhcccc--CCChHHHHHHHhhcCh--hh
Q 044543 325 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVE--NQDAIDACIVGMLGDA--KE 400 (962)
Q Consensus 325 k~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~--~~~~~~~al~~~~~~~--~~ 400 (962)
|+++++|+||++|+||||||||||+|+|+|.+.. ...+.+.++++.+++.++... ..||+|.|++.++... ..
T Consensus 360 k~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~---~~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~~ 436 (902)
T PRK10517 360 KRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHT---DISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARS 436 (902)
T ss_pred ecchhhhhccCCCEEEecCCCccccceEEEEEEe---cCCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchhh
Confidence 9999999999999999999999999999998753 112345567777777655432 3699999999887532 22
Q ss_pred hhcCceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhcc----------chHHHHHHHHHHHHHHhcCCeE
Q 044543 401 ARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNL----------REDVRNKAHTIIDKFADRGLRS 470 (962)
Q Consensus 401 ~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~~i~~~a~~GlR~ 470 (962)
....++.++.+||+|.+|||++++.+.++.+..++||+||.++++|+. +++.++++.+..++++++|+|+
T Consensus 437 ~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rv 516 (902)
T PRK10517 437 LASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRV 516 (902)
T ss_pred hhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEE
Confidence 345678889999999999999998877777889999999999999963 2344566778889999999999
Q ss_pred EEEEeecCCCCCC---CCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCc
Q 044543 471 LAVAEQSVPEKTK---ESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS 547 (962)
Q Consensus 471 L~~A~~~~~~~~~---~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~ 547 (962)
+++||++++..+. ...|++++|+|+++|+||||+|++++|++|+++||+|+|+||||+.||.++|+++||.. .
T Consensus 517 lavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~----~ 592 (902)
T PRK10517 517 VAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA----G 592 (902)
T ss_pred EEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc----c
Confidence 9999998764321 12478999999999999999999999999999999999999999999999999999952 3
Q ss_pred ccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHh
Q 044543 548 SALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARG 627 (962)
Q Consensus 548 ~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~ 627 (962)
.++.|.+.+ .++++++++.+++.+||||++|+||.++|+.||++|++|+|||||+||+||||+||||||||+|+|+||+
T Consensus 593 ~v~~G~el~-~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAke 671 (902)
T PRK10517 593 EVLIGSDIE-TLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIARE 671 (902)
T ss_pred CceeHHHHH-hCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHHH
Confidence 566676554 6788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCchHHHHHHHHHHhhhchhccccC
Q 044543 628 ASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIALIWK-FDFSPFMVLIIAILNDGTIMTISKD 706 (962)
Q Consensus 628 aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~~~~~~-~~~~p~~il~i~l~~~~~~~~l~~d 706 (962)
+||+||++|+|++|++++++||++|+||+|++.|.++.|+..++.+++.+++++ +|+.|+|++|+|+++|++.+++++|
T Consensus 672 aADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D~~~~al~~d 751 (902)
T PRK10517 672 AADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPFD 751 (902)
T ss_pred hCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHhhcCC
Confidence 999999999999999999999999999999999999999988887777766667 6999999999999999878999999
Q ss_pred CCCCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccCCChhHHHHHHHHHHHHHHHHHHhh
Q 044543 707 RVKPSP--VPDTWKLKEIFATGIVLGTYLAVMTVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFV 784 (962)
Q Consensus 707 ~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~ 784 (962)
+++++. +|.+|+...+...+++.|++.+++++..|++++.. ++... .......++..|+.+.+++.+++++
T Consensus 752 ~~~~~~m~~p~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~F~~~~~~q~~~~~~ 824 (902)
T PRK10517 752 NVDDEQIQKPQRWNPADLGRFMVFFGPISSIFDILTFCLMWWV------FHANT-PETQTLFQSGWFVVGLLSQTLIVHM 824 (902)
T ss_pred CCChhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------ccccc-hhhHhHHHHHHHHHHHHHHHHHHHh
Confidence 998874 67889888888888888999888887766654321 11110 0000124456699999999999999
Q ss_pred hccCC-CCcccchhHHHHHHHHHHHHHHHHHHHhhccccccccchh--HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 785 TRSRS-WSFLERPGLLLIAAFIIAQLVATLIAVYANFGFARIHGIG--WGWVGVIWLYSIVFYIPLDVLKFIVR 855 (962)
Q Consensus 785 ~r~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~K~~~r 855 (962)
.|+++ ++|.++|.+..+++.++.+++...+++..-.+++.+.+++ +..|+++++++.. ++.++.|..+.
T Consensus 825 ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~~~~ 896 (902)
T PRK10517 825 IRTRRIPFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVKGFYS 896 (902)
T ss_pred hccCCCCcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 99987 4555555555444444444433333211112345566666 4444443444433 56788776533
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-128 Score=1201.09 Aligned_cols=815 Identities=24% Similarity=0.403 Sum_probs=678.0
Q ss_pred ccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCccc-cchHHHHHHhhhhhHHHHHHHHHHHHHHHHcC----C
Q 044543 26 DLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEIAAIMAIALANG----G 100 (962)
Q Consensus 26 ~~~~~~~~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~----~ 100 (962)
..|..+.+|+++.|+++.+|||++|+++|+++||+|+++.++ .++|+.|+++|++|+.++++++++++++++.. .
T Consensus 26 ~~~~~~~~~v~~~l~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~ 105 (903)
T PRK15122 26 REAANSLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRR 105 (903)
T ss_pred HHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccC
Confidence 456889999999999999999999999999999999999766 56889999999999999999999999987521 1
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEEC------CeEEEEECcCcCCCcEEEEeCCCe
Q 044543 101 GKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRD------GAWREQEASILVPGDVISIKLGDI 174 (962)
Q Consensus 101 ~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rd------g~~~~i~~~~Lv~GDiI~l~~Gd~ 174 (962)
+...+|.++++|+++++++++++++||++++++.++|+++.+++++|+|| |++++|++++|||||+|.|++||+
T Consensus 106 ~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~ 185 (903)
T PRK15122 106 GEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDM 185 (903)
T ss_pred CccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCE
Confidence 22358999999999999999999999999999999999999999999999 489999999999999999999999
Q ss_pred eecceEEEecCCeeEecccccCCCeeeecCC-----------------------CCcccccceeecceEEEEEEEecchh
Q 044543 175 IPADARLLDGDPLKIDQSALTGESLPVTKMP-----------------------GDEVFSGSTCKQGEIEAVVIATGVHT 231 (962)
Q Consensus 175 VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~-----------------------g~~v~~Gs~v~~G~~~~~V~~tG~~T 231 (962)
|||||+|++|+++.||||+|||||.|+.|.+ +|++|+||.|.+|+++++|++||.+|
T Consensus 186 IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T 265 (903)
T PRK15122 186 IPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRT 265 (903)
T ss_pred EeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEecccc
Confidence 9999999999889999999999999999975 36899999999999999999999999
Q ss_pred HHHhHHHhhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHH
Q 044543 232 FFGKAAHLVDSTNQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMA 311 (962)
Q Consensus 232 ~~gki~~l~~~~~~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~ 311 (962)
++||+++++.+.+.++++|+.++++++++..+..+++.+.+++. .....+|.+++..++++++++|||+||++++++++
T Consensus 266 ~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~-~~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La 344 (903)
T PRK15122 266 YFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLIN-GFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLA 344 (903)
T ss_pred HhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhccCCHHHHHHHHHHHHHHHccchHHHHHHHHHH
Confidence 99999999987667789999999988765443332222222221 22345788899999999999999999999999999
Q ss_pred HHHHHHhcCCcccccCchHHhhcCceEEEecccccccCCceEEEEEeeeecccCCChHHHHHHHHHhccc--cCCChHHH
Q 044543 312 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRV--ENQDAIDA 389 (962)
Q Consensus 312 ~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~--~~~~~~~~ 389 (962)
.|+.+|+++|+++|+++++|+||++|+||||||||||+|+|+|.+... ..+.+.++++.+++.++.. ..+||+|.
T Consensus 345 ~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~---~~~~~~~~~l~~a~l~s~~~~~~~~p~e~ 421 (903)
T PRK15122 345 KGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNLMDQ 421 (903)
T ss_pred HHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEc---CCCCChHHHHHHHHHhCCCCCCCCChHHH
Confidence 999999999999999999999999999999999999999999988642 2233456677776654332 24599999
Q ss_pred HHHHhhcChh--hhhcCceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhcc----------chHHHHHHH
Q 044543 390 CIVGMLGDAK--EARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNL----------REDVRNKAH 457 (962)
Q Consensus 390 al~~~~~~~~--~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~----------~~~~~~~~~ 457 (962)
|++.++.+.. .....++.++.+||++.+|+|++++++.+|+++.++|||||.++++|.. +++.++++.
T Consensus 422 All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~ 501 (903)
T PRK15122 422 AVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLL 501 (903)
T ss_pred HHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHH
Confidence 9998875321 1234678889999999999999999877888999999999999999963 233456778
Q ss_pred HHHHHHHhcCCeEEEEEeecCCCCC-----CCCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHH
Q 044543 458 TIIDKFADRGLRSLAVAEQSVPEKT-----KESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAK 532 (962)
Q Consensus 458 ~~i~~~a~~GlR~L~~A~~~~~~~~-----~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~ 532 (962)
+.+++++.+|+|++++||++++.++ .+..|++++|+|+++++||||+|++++|++|+++||+|+|+||||+.||.
T Consensus 502 ~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~ 581 (903)
T PRK15122 502 ALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTA 581 (903)
T ss_pred HHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHH
Confidence 8889999999999999999876532 12357899999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcC
Q 044543 533 ETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKA 612 (962)
Q Consensus 533 ~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~A 612 (962)
+||+++||.. ..++.|.+.+ .++++++++.+++.+||||++|+||+++|+.||++|++|+|||||+||+||||+|
T Consensus 582 aIA~~lGI~~----~~vi~G~el~-~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~A 656 (903)
T PRK15122 582 KICREVGLEP----GEPLLGTEIE-AMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDA 656 (903)
T ss_pred HHHHHcCCCC----CCccchHhhh-hCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhC
Confidence 9999999953 3466666554 6788899999999999999999999999999999999999999999999999999
Q ss_pred CeeEEccCchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCchHHHHHH
Q 044543 613 DIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIALIWK-FDFSPFMVLI 691 (962)
Q Consensus 613 dVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~~~~~~-~~~~p~~il~ 691 (962)
|||||||+|+|+||++||+||++|+|++|+.++++||++|+|++|++.|.++.|+..++.+++..++.+ +|+.|+|++|
T Consensus 657 DVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~ 736 (903)
T PRK15122 657 DVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLL 736 (903)
T ss_pred CEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999987776665555555 7999999999
Q ss_pred HHHHhhhchhccccCCCCCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccCCChhHHHHH
Q 044543 692 IAILNDGTIMTISKDRVKPSP--VPDTWKLKEIFATGIVLGTYLAVMTVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAA 769 (962)
Q Consensus 692 i~l~~~~~~~~l~~d~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~ 769 (962)
+|+++|++.+++++|+++++. +|++|+.+.+-..+++.|.+.+++++..|++.+.. + . .+. . ......++.
T Consensus 737 ~nli~D~~~lal~~d~~~~~~m~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~-~--~~~--~-~~~~~~~t~ 809 (903)
T PRK15122 737 QNLMYDISQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWFV-F-A--ANS--V-EMQALFQSG 809 (903)
T ss_pred HHHHHHHHHHhhcCCCCCHhhcCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH-h-c--cCc--H-hhhhhhHHH
Confidence 999999888999999988765 77888766655566667887777777666553211 0 0 010 0 000124577
Q ss_pred HHHHHHHHHHHHHhhhccCC-CCcccchhHHHHHHHHHHHHHHHHHHH-hhccccccccchhHHHHHHHHHHHHHHHHHH
Q 044543 770 VYLQVSIVSQALIFVTRSRS-WSFLERPGLLLIAAFIIAQLVATLIAV-YANFGFARIHGIGWGWVGVIWLYSIVFYIPL 847 (962)
Q Consensus 770 ~~~~~~~~~~~~~~~~r~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 847 (962)
.|+.+++++.+++|+.|+++ ++|...+.+..+++.++.+++.+.+.+ .. -.++.+.++++..|++++.++++.+++.
T Consensus 810 ~f~~l~~~q~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~f~~~~l~~~~~~~~~~~~~~~~~~~ 888 (903)
T PRK15122 810 WFIEGLLSQTLVVHMLRTQKIPFIQSTAALPVLLTTGLIMAIGIYIPFSPL-GAMVGLEPLPWSYFPWLAATLLGYCLVA 888 (903)
T ss_pred HHHHHHHHHHHHHHhhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhhHHHH-HHHhCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999987 444433433333333333333332221 01 1345677788888888788888888889
Q ss_pred HHHHHHHHHh
Q 044543 848 DVLKFIVRYA 857 (962)
Q Consensus 848 ~~~K~~~r~~ 857 (962)
++.|.+.++.
T Consensus 889 e~~k~~~~r~ 898 (903)
T PRK15122 889 QGMKRFYIRR 898 (903)
T ss_pred HHHHHHHhhh
Confidence 9988554433
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-127 Score=1192.54 Aligned_cols=808 Identities=25% Similarity=0.395 Sum_probs=670.9
Q ss_pred cccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCccc-cchHHHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCC
Q 044543 25 VDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEIAAIMAIALANGGGKP 103 (962)
Q Consensus 25 ~~~~~~~~~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~ 103 (962)
.+.|.++.+++++.|+++.+|||++|+++|+++||+|+++.++ .++|+.|+++|++|++++++++++++++++
T Consensus 13 ~~~~~~~~~~~~~~l~~~~~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~------ 86 (867)
T TIGR01524 13 LKESQMGKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD------ 86 (867)
T ss_pred HHHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh------
Confidence 3556889999999999999999999999999999999998876 468899999999999999999999999875
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEE------CCeEEEEECcCcCCCcEEEEeCCCeeec
Q 044543 104 PDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLR------DGAWREQEASILVPGDVISIKLGDIIPA 177 (962)
Q Consensus 104 ~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~R------dg~~~~i~~~~Lv~GDiI~l~~Gd~VPa 177 (962)
+|.++++|++++++++++++++|++++++.++|+++.+++++|+| ||++++|+++||||||+|.|++||+|||
T Consensus 87 -~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPa 165 (867)
T TIGR01524 87 -DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPA 165 (867)
T ss_pred -hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcc
Confidence 899999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred ceEEEecCCeeEecccccCCCeeeecCCCC-------------cccccceeecceEEEEEEEecchhHHHhHHHhhhccC
Q 044543 178 DARLLDGDPLKIDQSALTGESLPVTKMPGD-------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN 244 (962)
Q Consensus 178 D~~ll~g~~~~Vdes~LTGEs~pv~K~~g~-------------~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~ 244 (962)
||+|++|+++.||||+|||||.|+.|.+|+ ++|+||.+.+|+++++|++||.+|.+||+++++++.+
T Consensus 166 Dg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~ 245 (867)
T TIGR01524 166 DARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERR 245 (867)
T ss_pred cEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhCCC
Confidence 999999988999999999999999999864 6999999999999999999999999999999998866
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCccc
Q 044543 245 QEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 324 (962)
Q Consensus 245 ~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilv 324 (962)
+++++|+.++++++++..+.++++.+.+++ +.+...+|.+++..++++++++|||+||++++++++.|+.+|+++|+++
T Consensus 246 ~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilv 324 (867)
T TIGR01524 246 GQTAFDKGVKSVSKLLIRFMLVMVPVVLMI-NGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIV 324 (867)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHheeh-HHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEE
Confidence 778999999999988655444433332222 2223457888899999999999999999999999999999999999999
Q ss_pred ccCchHHhhcCceEEEecccccccCCceEEEEEeeeecccCCChHHHHHHHHHhcccc--CCChHHHHHHHhhcCh--hh
Q 044543 325 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVE--NQDAIDACIVGMLGDA--KE 400 (962)
Q Consensus 325 k~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~--~~~~~~~al~~~~~~~--~~ 400 (962)
|+++++|+||++|+||||||||||+|+|+|.+... ..+.+.++++.+++.++... .+||+|.|++.++.+. ..
T Consensus 325 k~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~---~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~ 401 (867)
T TIGR01524 325 KELSAIQNFGAMDILCTDKTGTLTQDKIELEKHID---SSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQ 401 (867)
T ss_pred ccchhhhhccCccEEEecCCCccccCeEEEEEEec---CCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhh
Confidence 99999999999999999999999999999988541 22345566777776554432 3599999999887542 22
Q ss_pred hhcCceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhcc----------chHHHHHHHHHHHHHHhcCCeE
Q 044543 401 ARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNL----------REDVRNKAHTIIDKFADRGLRS 470 (962)
Q Consensus 401 ~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~~i~~~a~~GlR~ 470 (962)
.+..++.++.+||+|.+|+|++++.+.++.++.++||+||.++++|+. +++.++++.+.+++++++|+|+
T Consensus 402 ~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rv 481 (867)
T TIGR01524 402 TASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRV 481 (867)
T ss_pred HhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEE
Confidence 345678889999999999999998876666789999999999999963 2344567888899999999999
Q ss_pred EEEEeecCCCCCC---CCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCc
Q 044543 471 LAVAEQSVPEKTK---ESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS 547 (962)
Q Consensus 471 L~~A~~~~~~~~~---~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~ 547 (962)
+++||++++.++. +..|++|+|+|+++++||||+|++++|++|+++||+|+|+|||++.||.++|+++||..+
T Consensus 482 lavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~---- 557 (867)
T TIGR01524 482 IAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAN---- 557 (867)
T ss_pred EEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC----
Confidence 9999998765432 124789999999999999999999999999999999999999999999999999999632
Q ss_pred ccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHh
Q 044543 548 SALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARG 627 (962)
Q Consensus 548 ~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~ 627 (962)
.++.|.+.+ .++++++++.+++.++|||++|+||+++|+.||++|++|+|+|||+||+||||+||||||||+|+|+||+
T Consensus 558 ~v~~g~~l~-~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~ 636 (867)
T TIGR01524 558 DFLLGADIE-ELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKE 636 (867)
T ss_pred CeeecHhhh-hCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHH
Confidence 456665543 6678899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCchHHHHHHHHHHhhhchhccccC
Q 044543 628 ASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIALIWK-FDFSPFMVLIIAILNDGTIMTISKD 706 (962)
Q Consensus 628 aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~~~~~~-~~~~p~~il~i~l~~~~~~~~l~~d 706 (962)
+||+||++++|++|+.++++||++|+||+|++.|.++.|+..++.+++..++.+ +|++|+|++|+|+++|++.+++++|
T Consensus 637 aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d~~~~al~~~ 716 (867)
T TIGR01524 637 ASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYDFSQLTLPWD 716 (867)
T ss_pred hCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999999999999999988877666666555 7999999999999999878999999
Q ss_pred CCCCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccCCChhHHHHHHHHHHHHHHHHHHhh
Q 044543 707 RVKPSP--VPDTWKLKEIFATGIVLGTYLAVMTVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFV 784 (962)
Q Consensus 707 ~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~ 784 (962)
+++++. +|++|+.+.+...+++.|++.+++++..|++.+... +..+. ......++..|+.+++++.+++|+
T Consensus 717 ~~~~~~m~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~t~~f~~~~~~~~~~~~~ 789 (867)
T TIGR01524 717 KMDREFLKKPHQWEQKGMGRFMLCIGPVSSIFDIATFLLMWFVF------SANTV-EEQALFQSGWFVVGLLSQTLVVHM 789 (867)
T ss_pred CCChHhhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHh------cccch-hhhhHHHHHHHHHHHHHHHHHHHh
Confidence 987773 566688777777788889988887776665543211 00000 012235678899999999999999
Q ss_pred hccCC-CCcccchhHHHHHHHHHHHHHHHHHHHhhccccccccchhHH--HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 044543 785 TRSRS-WSFLERPGLLLIAAFIIAQLVATLIAVYANFGFARIHGIGWG--WVGVIWLYSIVFYIPLDVLKFIVRYA 857 (962)
Q Consensus 785 ~r~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~K~~~r~~ 857 (962)
.|+++ ++|..++.+..+++.++.+++.+.++..+--.++.+.++++. -|++++.++++ ++.++.|.+..+.
T Consensus 790 ~R~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~--~~~e~~k~~~~~~ 863 (867)
T TIGR01524 790 IRTEKIPFIQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGYM--ATMQLVKTFYIRR 863 (867)
T ss_pred hCcCCCCcCcchHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHHHHHHHHH--HHHHHHHHHHHHh
Confidence 99987 444433333333333333332222211000123445554332 23333333333 6678888654443
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-124 Score=1181.80 Aligned_cols=832 Identities=23% Similarity=0.365 Sum_probs=680.2
Q ss_pred cccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-cchHHHHHHhhhhhHHHHHHHHHHHHHHHHcC-
Q 044543 23 ENVDLERIPINEVFEQLKCT-REGLSNEEGQKRLVIFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEIAAIMAIALANG- 99 (962)
Q Consensus 23 ~~~~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~- 99 (962)
..+|+|.++.+|+++.|+++ .+|||++|+++|+++||+|+++.++ .++|+.|+++|++|+++++++++++++++...
T Consensus 13 ~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~ 92 (997)
T TIGR01106 13 VEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQ 92 (997)
T ss_pred ccCCchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHh
Confidence 46899999999999999998 6799999999999999999998655 56889999999999999999999998875321
Q ss_pred -----CCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCe
Q 044543 100 -----GGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDI 174 (962)
Q Consensus 100 -----~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~ 174 (962)
.....+|.++++|+++++++++++++||+++++++++|++..+++++|+|||++++|++++|||||+|.|++||+
T Consensus 93 ~~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~ 172 (997)
T TIGR01106 93 ASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDR 172 (997)
T ss_pred hccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCE
Confidence 112347899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecceEEEecCCeeEecccccCCCeeeecCCCC----------cccccceeecceEEEEEEEecchhHHHhHHHhhhcc-
Q 044543 175 IPADARLLDGDPLKIDQSALTGESLPVTKMPGD----------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST- 243 (962)
Q Consensus 175 VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g~----------~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~- 243 (962)
|||||+|++|+.+.||||+|||||.|+.|.+++ ++|+||.+.+|++.++|++||.+|.+||+++++++.
T Consensus 173 IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~ 252 (997)
T TIGR01106 173 IPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLE 252 (997)
T ss_pred EeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcc
Confidence 999999999988999999999999999998864 699999999999999999999999999999988765
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCcc
Q 044543 244 NQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 323 (962)
Q Consensus 244 ~~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~il 323 (962)
.+++++|+.++++.+++..+++++.++.++ .+...+..|.+.+..++++++++|||+||++++++++.++.+|+++|++
T Consensus 253 ~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~il 331 (997)
T TIGR01106 253 NGKTPIAIEIEHFIHIITGVAVFLGVSFFI-LSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCL 331 (997)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCcE
Confidence 467999999999988765544333332222 2233456778888899999999999999999999999999999999999
Q ss_pred cccCchHHhhcCceEEEecccccccCCceEEEEEeeee--cc-c--------CCCh-----HHHHHHHHHhccc------
Q 044543 324 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEV--FV-K--------DMDK-----DTVILYGARASRV------ 381 (962)
Q Consensus 324 vk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~--~~-~--------~~~~-----~~~l~~a~~~~~~------ 381 (962)
+|+++++|+||++++||||||||||+|+|+|.++++.. +. . ..+. +.++..++.|+..
T Consensus 332 vk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~ 411 (997)
T TIGR01106 332 VKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQ 411 (997)
T ss_pred ecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeecccc
Confidence 99999999999999999999999999999999876421 10 0 0111 2455666666431
Q ss_pred ---------cCCChHHHHHHHhhc----ChhhhhcCceEeeecCCCCCCceEEEEEEc--CC-CCEEEEEeCcHHHHHHH
Q 044543 382 ---------ENQDAIDACIVGMLG----DAKEARAGITELHFLPFNPVEKRTAITYID--SD-GSWHRISKGAPEQIIEL 445 (962)
Q Consensus 382 ---------~~~~~~~~al~~~~~----~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~--~~-g~~~~~~KGa~e~il~~ 445 (962)
..+||+|.|++.++. +..+.+..++.++.+||+|++|||++++.. .+ +++++++|||||.|+++
T Consensus 412 ~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~ 491 (997)
T TIGR01106 412 ENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILER 491 (997)
T ss_pred CCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHH
Confidence 125899999998764 234456678899999999999999988763 22 46789999999999999
Q ss_pred hcc----------chHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCC-----------CCCCCCceEEEEeecCCCCCc
Q 044543 446 CNL----------REDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTK-----------ESPGGPWQFVGLLPLFDPPRH 504 (962)
Q Consensus 446 ~~~----------~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~-----------~~~e~~l~llG~i~i~D~lr~ 504 (962)
|+. +++.++.+.+.+++|+++|+||+++||+.+++++. +..|++|+|+|+++++||||+
T Consensus 492 c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~ 571 (997)
T TIGR01106 492 CSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRA 571 (997)
T ss_pred hhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChH
Confidence 962 23557778889999999999999999998865321 123789999999999999999
Q ss_pred cHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCC----------------------cccccccchhccCCcc
Q 044543 505 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP----------------------SSALLGQIKDANISAL 562 (962)
Q Consensus 505 ~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~----------------------~~~l~~~~~~~~~~~~ 562 (962)
|++++|++|+++||+|+|+|||++.||.++|+++|+.++... ..+++|.+.+ .++++
T Consensus 572 ~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~-~l~~~ 650 (997)
T TIGR01106 572 AVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLK-DMTSE 650 (997)
T ss_pred HHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhh-hCCHH
Confidence 999999999999999999999999999999999999653211 1245555443 56677
Q ss_pred hHHHHhhhcc--eEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEcc-CchHHHHhcccccccCCCch
Q 044543 563 PVDELIEKAD--GFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLS 639 (962)
Q Consensus 563 ~~~~~~~~~~--v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg-~gt~~a~~aaDivl~~~~~~ 639 (962)
++++++++.. ||||++|+||+++|+.+|+.|++|+|+|||+||+||||+|||||||| +|+|+|+++||++|++|+|+
T Consensus 651 el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~ 730 (997)
T TIGR01106 651 QLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFA 730 (997)
T ss_pred HHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHH
Confidence 8888888765 99999999999999999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCchHHHHHHHHHHhhhc-hhccccCCCCCC---CCC
Q 044543 640 VIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIALI-WKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PVP 714 (962)
Q Consensus 640 ~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~~~~-~~~~~~p~~il~i~l~~~~~-~~~l~~d~~~~~---~~~ 714 (962)
+|+.++++||++|+|+++++.|.+++|+..++..+++.++ .+.|++|+|++|+|+++|++ ++++++|++.+. ++|
T Consensus 731 ~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P 810 (997)
T TIGR01106 731 SIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQP 810 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCC
Confidence 9999999999999999999999999999877766666554 45689999999999999985 799999876543 123
Q ss_pred Ccc-----chHH-HHHHHHHHHHHHHHHHHHHHHHHHh-hccccc-cccc---------cccCCC-------------hh
Q 044543 715 DTW-----KLKE-IFATGIVLGTYLAVMTVLFFWAIHS-STFFSE-KFGV---------RSIRDS-------------PH 764 (962)
Q Consensus 715 ~~~-----~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~-~~g~---------~~~~~~-------------~~ 764 (962)
..+ ..+. ++.+.++.|+++++..++.|++.+. .+|... .++. .+..+. ..
T Consensus 811 ~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 890 (997)
T TIGR01106 811 RNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEF 890 (997)
T ss_pred cCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhcccchhh
Confidence 222 2222 3344556699999888877665442 122110 0110 000000 01
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCCc--ccchhHHHHHHHHHHHHHHHHHHHhhc--cccccccchhHHHHHHHHHHH
Q 044543 765 ELTAAVYLQVSIVSQALIFVTRSRSWSF--LERPGLLLIAAFIIAQLVATLIAVYAN--FGFARIHGIGWGWVGVIWLYS 840 (962)
Q Consensus 765 ~~~t~~~~~~~~~~~~~~~~~r~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 840 (962)
+.+|++|..+++++.++++++|+.+.++ ...++++++.++++..++..++ .|.+ -.++.+.+++|.+|+++++++
T Consensus 891 ~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~-~~~p~~~~~f~~~~l~~~~w~~~~~~~ 969 (997)
T TIGR01106 891 TCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFL-SYCPGMGVALRMYPLKPTWWFCAFPYS 969 (997)
T ss_pred hhhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHHHHHHHHHHHHHHHHH-HHhhhhHHHhccccCCHHHHHHHHHHH
Confidence 4689999999999999999999976432 2345556776666655554444 3433 345677888899899888999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 044543 841 IVFYIPLDVLKFIVRYA 857 (962)
Q Consensus 841 ~~~~~~~~~~K~~~r~~ 857 (962)
++.++..++.|++.|++
T Consensus 970 ~~~~~~~~~~k~~~r~~ 986 (997)
T TIGR01106 970 LLIFVYDEIRKLIIRRN 986 (997)
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 99888999999887764
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-123 Score=1157.07 Aligned_cols=800 Identities=27% Similarity=0.416 Sum_probs=674.8
Q ss_pred ccccCCHHHHHHHcCCC-CCCCC-HHHHHHHHhhcCCCccCccc-cchHHHHHHhh-hhhHHHHHHHHHHHHHHHHcCCC
Q 044543 26 DLERIPINEVFEQLKCT-REGLS-NEEGQKRLVIFGPNKLEEKK-ESKVLKFLGFM-WNPLSWVMEIAAIMAIALANGGG 101 (962)
Q Consensus 26 ~~~~~~~~~~~~~l~~~-~~GLt-~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~-~~~~~~~l~~~ail~~~l~~~~~ 101 (962)
++|.++.+++++.|+++ .+||| ++|+++|+++||+|+++.++ .++|+.|+++| ++|++++++++++++++++
T Consensus 3 ~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g---- 78 (884)
T TIGR01522 3 QYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG---- 78 (884)
T ss_pred chhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc----
Confidence 67899999999999998 56999 99999999999999999765 67889999999 9999999999999999975
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCeeecceEE
Q 044543 102 KPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARL 181 (962)
Q Consensus 102 ~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~l 181 (962)
+|.+++.|++++++++.+++++|+++++++++|++..+++++|+|||++++|+++||||||+|.|++||+|||||+|
T Consensus 79 ---~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~i 155 (884)
T TIGR01522 79 ---NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRI 155 (884)
T ss_pred ---chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCeeEecccccCCCeeeecCCCC--------------cccccceeecceEEEEEEEecchhHHHhHHHhhhcc-CCC
Q 044543 182 LDGDPLKIDQSALTGESLPVTKMPGD--------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQE 246 (962)
Q Consensus 182 l~g~~~~Vdes~LTGEs~pv~K~~g~--------------~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~ 246 (962)
++|+++.||||+|||||.|+.|.+++ ++|+||.|.+|++.++|++||.+|.+||+++++++. ..+
T Consensus 156 i~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~k 235 (884)
T TIGR01522 156 VEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPK 235 (884)
T ss_pred EEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCC
Confidence 99977999999999999999999863 799999999999999999999999999999999876 467
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCccccc
Q 044543 247 GHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKR 326 (962)
Q Consensus 247 ~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~ 326 (962)
+++|+.+++++.++....++.+++.+++.| ..+.++.+++..++++++++|||+||++++++++.++.+|+++|+++|+
T Consensus 236 t~lq~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk~ 314 (884)
T TIGR01522 236 TPLQKSMDLLGKQLSLVSFGVIGVICLVGW-FQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRK 314 (884)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCcccc
Confidence 899999999998765443332222223333 3456788899999999999999999999999999999999999999999
Q ss_pred CchHHhhcCceEEEecccccccCCceEEEEEeeee-cc---c--CC-------------------ChHHHHHHHHHhccc
Q 044543 327 MTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEV-FV---K--DM-------------------DKDTVILYGARASRV 381 (962)
Q Consensus 327 ~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~-~~---~--~~-------------------~~~~~l~~a~~~~~~ 381 (962)
++++|+||++|+||||||||||+|+|+|.++.... .. . ++ ...+++..++.|+..
T Consensus 315 ~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 394 (884)
T TIGR01522 315 LPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNA 394 (884)
T ss_pred hHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCCC
Confidence 99999999999999999999999999999876421 00 0 00 013455556555432
Q ss_pred c--------CCChHHHHHHHhhcCh--hhhhcCceEeeecCCCCCCceEEEEEEcC-CCCEEEEEeCcHHHHHHHhcc--
Q 044543 382 E--------NQDAIDACIVGMLGDA--KEARAGITELHFLPFNPVEKRTAITYIDS-DGSWHRISKGAPEQIIELCNL-- 448 (962)
Q Consensus 382 ~--------~~~~~~~al~~~~~~~--~~~~~~~~~l~~~pF~s~~kr~sv~~~~~-~g~~~~~~KGa~e~il~~~~~-- 448 (962)
. .+||+|.|++.++... ...+..++.++.+||+|.+|||+++++.. +++++.++|||||.|+.+|..
T Consensus 395 ~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~ 474 (884)
T TIGR01522 395 KFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQ 474 (884)
T ss_pred eecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhh
Confidence 1 2479999999887532 22345678899999999999999988753 577899999999999999963
Q ss_pred ---------chHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCc
Q 044543 449 ---------REDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVN 519 (962)
Q Consensus 449 ---------~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~ 519 (962)
+++.++++.+.+++++++|+|++++||+++ +.+|+|+|+++++||||+|++++|++|+++||+
T Consensus 475 ~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~ 546 (884)
T TIGR01522 475 KKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVR 546 (884)
T ss_pred hcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCe
Confidence 134456778889999999999999999875 457999999999999999999999999999999
Q ss_pred EEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEE
Q 044543 520 VKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMT 599 (962)
Q Consensus 520 v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~mi 599 (962)
++|+|||++.||.++|+++||..+. ...+.|.+.+ .++++++++.+.+..||||++|+||.++|+.+|++|++|+||
T Consensus 547 v~miTGD~~~tA~~ia~~~Gi~~~~--~~~v~g~~l~-~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mv 623 (884)
T TIGR01522 547 IIMITGDSQETAVSIARRLGMPSKT--SQSVSGEKLD-AMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMT 623 (884)
T ss_pred EEEECCCCHHHHHHHHHHcCCCCCC--CceeEhHHhH-hCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEE
Confidence 9999999999999999999997542 3345555544 677888999999999999999999999999999999999999
Q ss_pred cCCcCChhhhhcCCeeEEcc-CchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Q 044543 600 GDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLI-A 677 (962)
Q Consensus 600 GDG~ND~~aLk~AdVGIamg-~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~-~ 677 (962)
|||+||+|||++|||||||| +|+|+|+++||++|++|+|+.|+.++++||++|+|+++++.|.++.|+..++.+++. .
T Consensus 624 GDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~ 703 (884)
T TIGR01522 624 GDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATL 703 (884)
T ss_pred CCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 99999999999999999998 799999999999999999999999999999999999999999999999776655443 4
Q ss_pred HhhcCCchHHHHHHHHHHhhhc-hhccccCCCCCC---CCCC----ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 044543 678 LIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS---PVPD----TWKLKEIFATGIVLGTYLAVMTVLFFWAIHSSTF 749 (962)
Q Consensus 678 ~~~~~~~~p~~il~i~l~~~~~-~~~l~~d~~~~~---~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 749 (962)
+..+.|++|+|++|+|+++|++ ++++++|++.+. ++|. +...+.++...+++|+++++++++.|++.+..
T Consensus 704 ~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-- 781 (884)
T TIGR01522 704 MGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD-- 781 (884)
T ss_pred HcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcC--
Confidence 4466799999999999999987 589999876543 1222 23345566777888999888877766643310
Q ss_pred ccccccccccCCChhHHHHHHHHHHHHHHHHHHhhhccCCCCccc---chhHHHHHHHHHHHHHHHHHHHhhc--ccccc
Q 044543 750 FSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLE---RPGLLLIAAFIIAQLVATLIAVYAN--FGFAR 824 (962)
Q Consensus 750 ~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~ 824 (962)
+ ....+.+|++|..+++++.++.+++|+++.+++. ..|.++++++++..++..++ +|.+ -.++.
T Consensus 782 -----~-----~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~p~~~~~f~ 850 (884)
T TIGR01522 782 -----G-----VITARDTTMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLV-IYFPPLQSVFQ 850 (884)
T ss_pred -----C-----cchhhHHHHHHHHHHHHHHHHHHHHccCCccccccCcccCHHHHHHHHHHHHHHHHH-HHHHHHHHHHc
Confidence 1 0234567999999999999999999997755433 23456666666665554333 4432 24556
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 044543 825 IHGIGWGWVGVIWLYSIVFYIPLDVLKFIVRYA 857 (962)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~ 857 (962)
+.+++|..|+++++++++.++..+++|++.|++
T Consensus 851 ~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~~ 883 (884)
T TIGR01522 851 TEALSIKDLLFLLLITSSVCIVDEIRKKVERSR 883 (884)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 778889888888999999999999999887653
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-123 Score=1163.02 Aligned_cols=816 Identities=22% Similarity=0.340 Sum_probs=665.2
Q ss_pred CHHHHHHHcCCC-CCCCC--HHHHHHHHhhcCCCccCcccc-chHHHHHHhhhhhHHHHHHHHHHHHHHHHc------CC
Q 044543 31 PINEVFEQLKCT-REGLS--NEEGQKRLVIFGPNKLEEKKE-SKVLKFLGFMWNPLSWVMEIAAIMAIALAN------GG 100 (962)
Q Consensus 31 ~~~~~~~~l~~~-~~GLt--~~e~~~r~~~~G~N~i~~~~~-~~~~~~l~~~~~~~~~~l~~~ail~~~l~~------~~ 100 (962)
+.+++++.|+++ ++||| ++||++|+++||+|+++.+++ ++|+.|+++|++|++++++++++++++++. ..
T Consensus 43 ~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~ 122 (941)
T TIGR01517 43 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 122 (941)
T ss_pred CHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccC
Confidence 789999999998 66999 999999999999999998765 678899999999999999999999999762 12
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcC-CCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCeeecce
Q 044543 101 GKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAG-LAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADA 179 (962)
Q Consensus 101 ~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~-~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~ 179 (962)
++..+|.+++.|+++++++.++++++|++++++.++|++. .+++++|+|||++++|++++|||||+|.|++||+|||||
T Consensus 123 ~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 202 (941)
T TIGR01517 123 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADG 202 (941)
T ss_pred ccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccE
Confidence 3345899999999999999999999999999999999864 478999999999999999999999999999999999999
Q ss_pred EEEecCCeeEecccccCCCeeeecCCCCc--ccccceeecceEEEEEEEecchhHHHhHHHhhhccCCCChHHHHHHHHH
Q 044543 180 RLLDGDPLKIDQSALTGESLPVTKMPGDE--VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTAIG 257 (962)
Q Consensus 180 ~ll~g~~~~Vdes~LTGEs~pv~K~~g~~--v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~l~~~~~~i~ 257 (962)
+|++|+++.||||+|||||.|+.|.+++. +|+||.+.+|++.++|++||.+|.+||++++++.+++++++|+.++++.
T Consensus 203 ~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~~ 282 (941)
T TIGR01517 203 VFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEGEDTPLQEKLSELA 282 (941)
T ss_pred EEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCCCCCcHHHHHHHHH
Confidence 99999789999999999999999998775 9999999999999999999999999999999987767789999999988
Q ss_pred HHHHHHHHHHHHHHHHHH---hhcc---c---------cchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCc
Q 044543 258 NFCICSIAIGMVIEIIVM---YPIQ---H---------RAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 322 (962)
Q Consensus 258 ~~~~~~i~~~~~~~~~~~---~~~~---~---------~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~i 322 (962)
+++..++++++++.++++ |... + .++.+.+..++++++++|||+||++++++++.++.+|+++|+
T Consensus 283 ~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~i 362 (941)
T TIGR01517 283 GLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNN 362 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCC
Confidence 775443322222211111 1111 1 246677888999999999999999999999999999999999
Q ss_pred ccccCchHHhhcCceEEEecccccccCCceEEEEEeeeec--c-cC----CC--hHHHHHHH-HHhcccc----------
Q 044543 323 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVF--V-KD----MD--KDTVILYG-ARASRVE---------- 382 (962)
Q Consensus 323 lvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~--~-~~----~~--~~~~l~~a-~~~~~~~---------- 382 (962)
++|+++++|+||++|+||||||||||+|+|+|.++..... . .+ .+ ..+++..+ ++++...
T Consensus 363 lvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~ 442 (941)
T TIGR01517 363 LVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRA 442 (941)
T ss_pred EEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccc
Confidence 9999999999999999999999999999999998764321 0 00 01 11223333 3333211
Q ss_pred -CCChHHHHHHHhhc----ChhhhhcCceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhccc--------
Q 044543 383 -NQDAIDACIVGMLG----DAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNLR-------- 449 (962)
Q Consensus 383 -~~~~~~~al~~~~~----~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-------- 449 (962)
.+||+|.|++.++. +..+.+..++.++.+||+|.+|||+++++..+++++.++|||||.|+++|+..
T Consensus 443 ~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~ 522 (941)
T TIGR01517 443 FIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEAT 522 (941)
T ss_pred cCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcc
Confidence 25899999998874 23334456777889999999999999998777788999999999999999631
Q ss_pred --hHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCC---CCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEc
Q 044543 450 --EDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTK---ESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMIT 524 (962)
Q Consensus 450 --~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~---~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miT 524 (962)
.+.++++.+.+++++++|+|++++||++++.++. +..|++|+|+|+++++||||+|++++|++|+++||+|+|+|
T Consensus 523 ~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miT 602 (941)
T TIGR01517 523 PISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVT 602 (941)
T ss_pred cCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEEC
Confidence 0235677888999999999999999998864332 33478999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcC
Q 044543 525 GDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVN 604 (962)
Q Consensus 525 GD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~N 604 (962)
||++.||.++|++|||.++. ..++.|.+.+ .++++++++++++.+||||++|+||+++|+.||++|++|+|||||+|
T Consensus 603 GD~~~tA~~iA~~~GI~~~~--~~vi~G~~~~-~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvN 679 (941)
T TIGR01517 603 GDNIDTAKAIARNCGILTFG--GLAMEGKEFR-RLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTN 679 (941)
T ss_pred CCChHHHHHHHHHcCCCCCC--ceEeeHHHhh-hCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 99999999999999997542 3456665544 56778899999999999999999999999999999999999999999
Q ss_pred ChhhhhcCCeeEEcc-CchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhcC
Q 044543 605 DAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLI-ALIWKF 682 (962)
Q Consensus 605 D~~aLk~AdVGIamg-~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~-~~~~~~ 682 (962)
|+||||+|||||||| +|+|+|+++||++|++|+|++|+.++++||++|+|+++++.|.+++|+..++..++. .+..++
T Consensus 680 DapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~ 759 (941)
T TIGR01517 680 DAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTS 759 (941)
T ss_pred hHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999 999999999999999999999999999999999999999999999999766555444 444667
Q ss_pred CchHHHHHHHHHHhhhc-hhccccCCCCCC---CCCCcc----chHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Q 044543 683 DFSPFMVLIIAILNDGT-IMTISKDRVKPS---PVPDTW----KLKEIFATGIVLGTYLAVMTVLFFWAIHSSTFFSEKF 754 (962)
Q Consensus 683 ~~~p~~il~i~l~~~~~-~~~l~~d~~~~~---~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 754 (962)
|++|+|++|+|+++|++ ++++++|++.+. .+|.+| ..+.++...+.+|+++++++++.|+.... ++.. .
T Consensus 760 pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~-~ 836 (941)
T TIGR01517 760 PLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGS--IFDV-S 836 (941)
T ss_pred cHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhcc-c
Confidence 99999999999999975 799998876544 233332 23456677788899999888876665431 1110 0
Q ss_pred cccc-cCCChhHHHHHHHHHHHHHHHHHHhhhccCCC--Cccc-chhHHHHHHHHHHHHHHHHHHHhhccccccccchhH
Q 044543 755 GVRS-IRDSPHELTAAVYLQVSIVSQALIFVTRSRSW--SFLE-RPGLLLIAAFIIAQLVATLIAVYANFGFARIHGIGW 830 (962)
Q Consensus 755 g~~~-~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~--~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 830 (962)
+... ........+|++|.++++++.++.+++|+.+. +|.. ..+++++.++++..++..++..+. -.++++.+++|
T Consensus 837 ~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~~~-~~~f~~~~l~~ 915 (941)
T TIGR01517 837 GPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIVEFG-GSFFSTVSLSI 915 (941)
T ss_pred CcccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHHHHHHHHH-HHHhcccCCCH
Confidence 1000 00123467899999999999999999998653 2211 123355555555544443333332 23556778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 044543 831 GWVGVIWLYSIVFYIPLDVLKFI 853 (962)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~K~~ 853 (962)
..|+.+++++++.+++.++.|++
T Consensus 916 ~~w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 916 EQWIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Confidence 88888888998888888888875
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-123 Score=1059.75 Aligned_cols=816 Identities=23% Similarity=0.334 Sum_probs=651.2
Q ss_pred CHHHHHHHcCCC-CCCCCH--HHHHHHHhhcCCCccCcccc-chHHHHHHhhhhhHHHHHHHHHHHHHHHHcCC-CCCCC
Q 044543 31 PINEVFEQLKCT-REGLSN--EEGQKRLVIFGPNKLEEKKE-SKVLKFLGFMWNPLSWVMEIAAIMAIALANGG-GKPPD 105 (962)
Q Consensus 31 ~~~~~~~~l~~~-~~GLt~--~e~~~r~~~~G~N~i~~~~~-~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~-~~~~~ 105 (962)
..+++++.|+|+ .+||+. +|.++|++.||.|.+|++++ ++|+..++.+.+.-.+++.++|++|+.++... +....
T Consensus 102 Gv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~G 181 (1034)
T KOG0204|consen 102 GVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDG 181 (1034)
T ss_pred CHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcc
Confidence 489999999998 679987 88999999999999998885 55666788888988899999999999987633 33569
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhc-CCCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCeeecceEEEec
Q 044543 106 WQDFVGIVVLLLINSTISFIEENNAGNAAAALMA-GLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDG 184 (962)
Q Consensus 106 ~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~-~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g 184 (962)
|++++.|++.+++..++....+|+.+++...|++ ....+..|+|||+.++|+..|||||||+.++.||.|||||++++|
T Consensus 182 W~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~g 261 (1034)
T KOG0204|consen 182 WIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQG 261 (1034)
T ss_pred cccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEec
Confidence 9999998876655545555555555555555543 235688999999999999999999999999999999999999999
Q ss_pred CCeeEecccccCCCeeeecCC--CCcccccceeecceEEEEEEEecchhHHHhHHHhhhccC-CCChHHHHHHHHHHHH-
Q 044543 185 DPLKIDQSALTGESLPVTKMP--GDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QEGHFQKVLTAIGNFC- 260 (962)
Q Consensus 185 ~~~~Vdes~LTGEs~pv~K~~--g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~-~~~~l~~~~~~i~~~~- 260 (962)
+++.||||+|||||.++.|.+ +.++++||++.+|.+.++|+++|.+|..|+++.++.... .++++|-.+++++..+
T Consensus 262 n~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Ig 341 (1034)
T KOG0204|consen 262 NSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIG 341 (1034)
T ss_pred cceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHH
Confidence 999999999999999999987 457999999999999999999999999999999988774 8899999888876542
Q ss_pred --HHHHHHHHHHHHHHHhhccc-----c---c--------hHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCc
Q 044543 261 --ICSIAIGMVIEIIVMYPIQH-----R---A--------YRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 322 (962)
Q Consensus 261 --~~~i~~~~~~~~~~~~~~~~-----~---~--------~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~i 322 (962)
.+.++...++.++..|+... . . +.+.+..++.++++++|++||+++++++++++++|.++++
T Consensus 342 k~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~ 421 (1034)
T KOG0204|consen 342 KIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNN 421 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchh
Confidence 11222222222233333211 1 1 1122333455688899999999999999999999999999
Q ss_pred ccccCchHHhhcCceEEEecccccccCCceEEEEEeeeecccC--------CChH--HHHHHH-HHhcc-----------
Q 044543 323 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKD--------MDKD--TVILYG-ARASR----------- 380 (962)
Q Consensus 323 lvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~--------~~~~--~~l~~a-~~~~~----------- 380 (962)
++|+++|+|+||..++||+|||||||+|+|+|.+.++...... .++. +++..+ +.++.
T Consensus 422 LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~ 501 (1034)
T KOG0204|consen 422 LVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGE 501 (1034)
T ss_pred HHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCc
Confidence 9999999999999999999999999999999999776422111 1111 111111 11111
Q ss_pred --ccCCChHHHHHHHhh----cChhhhhcCceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhcc------
Q 044543 381 --VENQDAIDACIVGML----GDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNL------ 448 (962)
Q Consensus 381 --~~~~~~~~~al~~~~----~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~------ 448 (962)
...++|.|+|++++. .+.+..|...+.++++||||++|+|+++++.++|..+.++|||.|.+++.|..
T Consensus 502 ~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g 581 (1034)
T KOG0204|consen 502 QPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNG 581 (1034)
T ss_pred CccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCC
Confidence 112489999998876 35667788889999999999999999999988877349999999999999964
Q ss_pred -----chHHHHHHHHHHHHHHhcCCeEEEEEeecCCCC-------C-CCCCCCCceEEEEeecCCCCCccHHHHHHHHHh
Q 044543 449 -----REDVRNKAHTIIDKFADRGLRSLAVAEQSVPEK-------T-KESPGGPWQFVGLLPLFDPPRHDSAETIRRALN 515 (962)
Q Consensus 449 -----~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~-------~-~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~ 515 (962)
+++.+..+.+.++.||.+|||++|+||++..+. + .+..+.+++++|+++|+||+|||++++|+.|++
T Consensus 582 ~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~ 661 (1034)
T KOG0204|consen 582 ELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQR 661 (1034)
T ss_pred CEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHH
Confidence 345566889999999999999999999984322 1 246788999999999999999999999999999
Q ss_pred CCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCE
Q 044543 516 LGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHI 595 (962)
Q Consensus 516 aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~ 595 (962)
|||+|.|+||||..||++||.+|||.++......+.|.+. ..+++++.++++++.+|+||.+|.||+.+|+.|+++||+
T Consensus 662 AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eF-r~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~V 740 (1034)
T KOG0204|consen 662 AGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEF-RELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEV 740 (1034)
T ss_pred cCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhh-hhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcE
Confidence 9999999999999999999999999887655556666554 488999999999999999999999999999999999999
Q ss_pred EEEEcCCcCChhhhhcCCeeEEcc-CchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Q 044543 596 CGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIV-LGF 673 (962)
Q Consensus 596 v~miGDG~ND~~aLk~AdVGIamg-~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~-l~~ 673 (962)
||++|||.||+||||+||||.||| .||++||++|||+|+||||++|++++.|||..|.||+||++|+++.|+..+ +.|
T Consensus 741 VAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~f 820 (1034)
T KOG0204|consen 741 VAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNF 820 (1034)
T ss_pred EEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhh
Confidence 999999999999999999999999 999999999999999999999999999999999999999999999998544 445
Q ss_pred HHHHHhhcCCchHHHHHHHHHHhhhc-hhccccCCCCCC-------CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 674 LLIALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS-------PVPDTWKLKEIFATGIVLGTYLAVMTVLFFWAIH 745 (962)
Q Consensus 674 ~~~~~~~~~~~~p~~il~i~l~~~~~-~~~l~~d~~~~~-------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 745 (962)
......-..|+..+|+||+|+++|.+ +++++.|++.+. .+...+..+.+|...+.+++|+-++.+.+.+...
T Consensus 821 v~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~ 900 (1034)
T KOG0204|consen 821 VSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGK 900 (1034)
T ss_pred hhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 44445556899999999999999987 799999887443 3345566778899999999999998886554432
Q ss_pred hhccccccccccccC-CChhHHHHHHHHHHHHHHHHHHhhhccCC--CCcccchhHHHHHHHHHHHHHHHHHHHhhcccc
Q 044543 746 SSTFFSEKFGVRSIR-DSPHELTAAVYLQVSIVSQALIFVTRSRS--WSFLERPGLLLIAAFIIAQLVATLIAVYANFGF 822 (962)
Q Consensus 746 ~~~~~~~~~g~~~~~-~~~~~~~t~~~~~~~~~~~~~~~~~r~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 822 (962)
. . |+..+.. ....+..|++|-++++++.|+-++.|.-. -.|......+++++++...++..++.+...-.+
T Consensus 901 ~--i----f~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~~F~~ii~~T~v~QviIveF~g~~ 974 (1034)
T KOG0204|consen 901 S--I----FGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNRLFCVIITITVVSQVIIVEFGGAF 974 (1034)
T ss_pred h--h----hccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCceEEEEeeeeeehhhhhhhhcCcc
Confidence 1 1 2222211 12345669999999999999999999855 222222222344444444444444444433456
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 823 ARIHGIGWGWVGVIWLYSIVFYIPLDVLKFI 853 (962)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~ 853 (962)
+.+.+++|.-|++++.+.+..++.--+.|.+
T Consensus 975 ~st~~L~~~qWl~ci~~g~~sl~~g~~ik~i 1005 (1034)
T KOG0204|consen 975 FSTTPLSLTQWLWCIFIGVLSLPWGQLLKCI 1005 (1034)
T ss_pred eeeecccHHHHHHHHHHHHHHHHHHHHheec
Confidence 7788899988888777776666655555543
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-115 Score=1085.53 Aligned_cols=779 Identities=27% Similarity=0.376 Sum_probs=628.1
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHHcC---CCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEEC
Q 044543 74 FLGFMWNPLSWVMEIAAIMAIALANG---GGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRD 150 (962)
Q Consensus 74 ~l~~~~~~~~~~l~~~ail~~~l~~~---~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rd 150 (962)
+++||++|++++|+++++++++++.. .....+|.++++|++++++++.+++++|++++++.++|++..+++++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 47899999999999999999997532 222358999999999999999999999999999999999999999999999
Q ss_pred CeEEEEECcCcCCCcEEEEeCCCeeecceEEEecCCeeEecccccCCCeeeecCCC-------------Ccccccceeec
Q 044543 151 GAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTKMPG-------------DEVFSGSTCKQ 217 (962)
Q Consensus 151 g~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g-------------~~v~~Gs~v~~ 217 (962)
|++++|+++||||||+|.|++||+|||||+|++|+++.||||+|||||.|+.|.++ +++|+||.+.+
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~ 160 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVA 160 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEec
Confidence 99999999999999999999999999999999997899999999999999999875 78999999999
Q ss_pred ceEEEEEEEecchhHHHhHHHhhhcc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----cccch----HhHH
Q 044543 218 GEIEAVVIATGVHTFFGKAAHLVDST-NQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPI-----QHRAY----RNGI 287 (962)
Q Consensus 218 G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~-----~~~~~----~~~~ 287 (962)
|+++++|++||.+|++||++++++.. .+++++|+.+++++.++..++++++++.+++.... .+.+| ...+
T Consensus 161 G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (917)
T TIGR01116 161 GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYF 240 (917)
T ss_pred ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHH
Confidence 99999999999999999999988776 47899999999998776544333222222221111 11122 2344
Q ss_pred HHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCcccccCchHHhhcCceEEEecccccccCCceEEEEEeeee------
Q 044543 288 DNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEV------ 361 (962)
Q Consensus 288 ~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~------ 361 (962)
..++++++++||++||+++++++++++++|+++|+++|+++++|+||++|+||||||||||+|+|+|.++....
T Consensus 241 ~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 320 (917)
T TIGR01116 241 KIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSL 320 (917)
T ss_pred HHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccccc
Confidence 45678899999999999999999999999999999999999999999999999999999999999999876421
Q ss_pred --c---ccCCC-------------------hHHHHHHHHHhcccc------------CCChHHHHHHHhhcChh------
Q 044543 362 --F---VKDMD-------------------KDTVILYGARASRVE------------NQDAIDACIVGMLGDAK------ 399 (962)
Q Consensus 362 --~---~~~~~-------------------~~~~l~~a~~~~~~~------------~~~~~~~al~~~~~~~~------ 399 (962)
+ ..+++ .+.++..++.|+... .+||+|.|++.++.+..
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~ 400 (917)
T TIGR01116 321 NEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKN 400 (917)
T ss_pred ceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhc
Confidence 0 00000 123455556665321 25999999998753211
Q ss_pred --------------hhhcCceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhcc-----------chHHHH
Q 044543 400 --------------EARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNL-----------REDVRN 454 (962)
Q Consensus 400 --------------~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~-----------~~~~~~ 454 (962)
..++.++.++.+||+|.+|||++++++ ++++..|+|||||.|+++|+. +++.++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~ 479 (917)
T TIGR01116 401 GVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKN 479 (917)
T ss_pred ccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHH
Confidence 124557789999999999999999875 467899999999999999963 134567
Q ss_pred HHHHHHHHHHh-cCCeEEEEEeecCCCCC----------CCCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEE
Q 044543 455 KAHTIIDKFAD-RGLRSLAVAEQSVPEKT----------KESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMI 523 (962)
Q Consensus 455 ~~~~~i~~~a~-~GlR~L~~A~~~~~~~~----------~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mi 523 (962)
++.+++++|++ +|+|||++|||.+++++ .+..|++|+|+|+++++||||+|++++|++||++||+++|+
T Consensus 480 ~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~mi 559 (917)
T TIGR01116 480 TILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMI 559 (917)
T ss_pred HHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEe
Confidence 78889999999 99999999999986432 24568899999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHhCCCCCCCC--cccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcC
Q 044543 524 TGDQLAIAKETGRRLGMGTNMYP--SSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGD 601 (962)
Q Consensus 524 TGD~~~tA~~ia~~~Gi~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGD 601 (962)
|||+++||.++|+++|+..+... ...+.|.+. ..+++++..+...+..||||++|+||.++|+.+|+.|++|+|+||
T Consensus 560 TGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l-~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGD 638 (917)
T TIGR01116 560 TGDNKETAEAICRRIGIFSPDEDVTFKSFTGREF-DEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGD 638 (917)
T ss_pred cCCCHHHHHHHHHHcCCCCCCccccceeeeHHHH-hhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecC
Confidence 99999999999999999754221 123455443 356667777888888999999999999999999999999999999
Q ss_pred CcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hh
Q 044543 602 GVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIAL-IW 680 (962)
Q Consensus 602 G~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~~~-~~ 680 (962)
|+||+||||+||||||||+|+++|+++||+++.+|+|++|++++++||++|+|+++++.|.+++|+..++..+++.+ .+
T Consensus 639 G~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~ 718 (917)
T TIGR01116 639 GVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGI 718 (917)
T ss_pred CcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999987776666544 45
Q ss_pred cCCchHHHHHHHHHHhhhc-hhccccCCCCCCC---CC----CccchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cccc
Q 044543 681 KFDFSPFMVLIIAILNDGT-IMTISKDRVKPSP---VP----DTWKLKEIFATGIVLGTYLAVMTVLFFWAIHSS-TFFS 751 (962)
Q Consensus 681 ~~~~~p~~il~i~l~~~~~-~~~l~~d~~~~~~---~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~ 751 (962)
+.||+|+|++|+|+++|++ +++++.+++++.. +| ++...+..+...++.|+++++++++.|++.+.. ++..
T Consensus 719 ~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 798 (917)
T TIGR01116 719 PEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTG 798 (917)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 6799999999999999965 6889887765431 12 223334556666788999998877666554321 2111
Q ss_pred c--cc--ccc---cc----CCChhHHHHHHHHHHHHHHHHHHhhhccCCCCccc---chhHHHHHHHHHHHHHHHHHHHh
Q 044543 752 E--KF--GVR---SI----RDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLE---RPGLLLIAAFIIAQLVATLIAVY 817 (962)
Q Consensus 752 ~--~~--g~~---~~----~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~ 817 (962)
. .. +.. +. .....+.+|+.|.++++++.++.|+.|+++.+++. ..|.++++++++..++.. +.+|
T Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~-~~~~ 877 (917)
T TIGR01116 799 CDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALHF-LILY 877 (917)
T ss_pred ccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHHHH-HHHH
Confidence 0 00 000 00 00234567999999999999999999997654332 234566666665555443 3344
Q ss_pred hc--cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 818 AN--FGFARIHGIGWGWVGVIWLYSIVFYIPLDVLKFIVR 855 (962)
Q Consensus 818 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r 855 (962)
.+ -.++++.+++|..|++++.++++.++..+++|++.|
T Consensus 878 v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 878 VPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred hHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 43 235667888999999989999999999999997753
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-111 Score=1066.19 Aligned_cols=752 Identities=22% Similarity=0.272 Sum_probs=592.9
Q ss_pred CCCCCHHHHHHHHhhcCCCccCccccchHHHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCCCChhhHHHHHHHHHHHHHH
Q 044543 43 REGLSNEEGQKRLVIFGPNKLEEKKESKVLKFLGFMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTI 122 (962)
Q Consensus 43 ~~GLt~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i 122 (962)
.+|||++|+++|+++||+|+++.+++++|+.|++++++|+++++++++++ |++. .+|++++.|+++++++..+
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~~s~~~ll~~~~~~p~~i~~i~~~~l-~~~~------~~~~~~~~i~~i~~~~~~~ 209 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYVFQVFSVIL-WLLD------EYYYYSLCIVFMSSTSISL 209 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCCCCHHHHHHHHHhchHHHHHHHHHHH-HHhh------hhHHHHHHHHHHHHHHHHH
Confidence 67999999999999999999999888999999999999998777666444 4433 3789999999999999999
Q ss_pred HHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEe--CCCeeecceEEEecCCeeEecccccCCCee
Q 044543 123 SFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIK--LGDIIPADARLLDGDPLKIDQSALTGESLP 200 (962)
Q Consensus 123 ~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~--~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~p 200 (962)
++++++++.++++++.. .++.++|+|||+|++|+++||||||+|.|+ +||+|||||+|++| +|.||||+|||||.|
T Consensus 210 ~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g-~~~VdES~LTGES~P 287 (1054)
T TIGR01657 210 SVYQIRKQMQRLRDMVH-KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSG-SCIVNESMLTGESVP 287 (1054)
T ss_pred HHHHHHHHHHHHHHhhc-CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeC-cEEEecccccCCccc
Confidence 99999999988888654 567999999999999999999999999999 99999999999999 699999999999999
Q ss_pred eecCCC------------------Ccccccceeec-------ceEEEEEEEecchhHHHhHHHhhhcc-CCCChHHHHHH
Q 044543 201 VTKMPG------------------DEVFSGSTCKQ-------GEIEAVVIATGVHTFFGKAAHLVDST-NQEGHFQKVLT 254 (962)
Q Consensus 201 v~K~~g------------------~~v~~Gs~v~~-------G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~ 254 (962)
+.|.+. +++|+||.+.+ |.+.++|++||.+|..|++++.+... +..+++++...
T Consensus 288 v~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~ 367 (1054)
T TIGR01657 288 VLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSF 367 (1054)
T ss_pred eecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHH
Confidence 999762 25999999985 78999999999999999999988665 45677888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCcccccCchHHhhc
Q 044543 255 AIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 334 (962)
Q Consensus 255 ~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg 334 (962)
++..+++++.+++.++ .++.+...+.++...+..++.+++++||++||++++++++.++.||+++|++||++.++|.+|
T Consensus 368 ~~~~~l~~~a~i~~i~-~~~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG 446 (1054)
T TIGR01657 368 KFILFLAVLALIGFIY-TIIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAG 446 (1054)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecc
Confidence 7665543322221111 111222235678888999999999999999999999999999999999999999999999999
Q ss_pred CceEEEecccccccCCceEEEEEeeeecccC----------CChHHHHHHHHHhccc------cCCChHHHHHHHhhcCh
Q 044543 335 GMDVLCSDKTGTLTLNKLTVDKNLVEVFVKD----------MDKDTVILYGARASRV------ENQDAIDACIVGMLGDA 398 (962)
Q Consensus 335 ~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~----------~~~~~~l~~a~~~~~~------~~~~~~~~al~~~~~~~ 398 (962)
++|++|||||||||+|+|+|.+......... ......+...+.|+.. ..+||+|.|++.+.+..
T Consensus 447 ~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~ 526 (1054)
T TIGR01657 447 KIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWT 526 (1054)
T ss_pred eeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCE
Confidence 9999999999999999999998754211000 1112233444445432 23699999999986421
Q ss_pred hhh-------------------hcCceEeeecCCCCCCceEEEEEEcCC-CCEEEEEeCcHHHHHHHhccchHHHHHHHH
Q 044543 399 KEA-------------------RAGITELHFLPFNPVEKRTAITYIDSD-GSWHRISKGAPEQIIELCNLREDVRNKAHT 458 (962)
Q Consensus 399 ~~~-------------------~~~~~~l~~~pF~s~~kr~sv~~~~~~-g~~~~~~KGa~e~il~~~~~~~~~~~~~~~ 458 (962)
.+. ...+++++.+||+|.+|||+++++..+ ++++.++|||||.|+++|+. +..++.+.+
T Consensus 527 ~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~-~~~p~~~~~ 605 (1054)
T TIGR01657 527 LEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP-ETVPSDYQE 605 (1054)
T ss_pred EECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCC-cCCChhHHH
Confidence 100 245788999999999999999998654 56789999999999999984 345778889
Q ss_pred HHHHHHhcCCeEEEEEeecCCCC--------CCCCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHH
Q 044543 459 IIDKFADRGLRSLAVAEQSVPEK--------TKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI 530 (962)
Q Consensus 459 ~i~~~a~~GlR~L~~A~~~~~~~--------~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~t 530 (962)
.+++|+++|+|||++|||++++. +++..|.+|+|+|+++|+||+|+|++++|++|+++||+|+|+||||+.|
T Consensus 606 ~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~T 685 (1054)
T TIGR01657 606 VLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLT 685 (1054)
T ss_pred HHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 99999999999999999998642 2356789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCc---------------------------------------------------ccccccchhc--
Q 044543 531 AKETGRRLGMGTNMYPS---------------------------------------------------SALLGQIKDA-- 557 (962)
Q Consensus 531 A~~ia~~~Gi~~~~~~~---------------------------------------------------~~l~~~~~~~-- 557 (962)
|.++|++|||.++.... .+++|...+.
T Consensus 686 A~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~ 765 (1054)
T TIGR01657 686 AVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQ 765 (1054)
T ss_pred HHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHH
Confidence 99999999997532100 0111211110
Q ss_pred cCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCC
Q 044543 558 NISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPG 637 (962)
Q Consensus 558 ~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~ 637 (962)
.+.++++++++.+..||||++|+||.++|+.||+.|++|+|||||+||+||||+||||||||++ ||+ .|||+++.+++
T Consensus 766 ~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-das-~AA~f~l~~~~ 843 (1054)
T TIGR01657 766 AHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-EAS-VAAPFTSKLAS 843 (1054)
T ss_pred HhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-cce-eecccccCCCc
Confidence 1233467778888999999999999999999999999999999999999999999999999865 555 79999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHhhhc-hhccccCCCCCC----C
Q 044543 638 LSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIALIWKFDFSPFMVLIIAILNDGT-IMTISKDRVKPS----P 712 (962)
Q Consensus 638 ~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~~~~~~~~~~p~~il~i~l~~~~~-~~~l~~d~~~~~----~ 712 (962)
|++|+++|++||+++.++++.+.|.+.+++..++..+. ....+.+++++|++|++++++.+ .++++.+++.+. +
T Consensus 844 ~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~ 922 (1054)
T TIGR01657 844 ISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI-LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKER 922 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCC
Confidence 99999999999999999999999999988866554433 23456889999999999999987 688888776432 2
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccc-cCCChhHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 044543 713 VPDTWKLKEIFATGIVLGTYLAVMTVLFFWAIHSSTFFSEKFGVRS-IRDSPHELTAAVYLQVSIVSQALIFVTRSRSWS 791 (962)
Q Consensus 713 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~ 791 (962)
++.+...+..+...+.+++++.++.+..|++.....|+........ .........|++| .++.++++..+..++.+..
T Consensus 923 P~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~g~p 1001 (1054)
T TIGR01657 923 PPSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLF-FVSSFQYLITAIVNSKGPP 1001 (1054)
T ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHH-HHHHHHHHHheEEEcCCcc
Confidence 2344444566666677788888888877766655444321111000 0011233467777 5666677777777776533
Q ss_pred cccc--hhHHHHHHHHHHHH
Q 044543 792 FLER--PGLLLIAAFIIAQL 809 (962)
Q Consensus 792 ~~~~--~~~~l~~~~~~~~~ 809 (962)
|... .|.+++++++++.+
T Consensus 1002 f~~~~~~N~~~~~~~~~~~~ 1021 (1054)
T TIGR01657 1002 FREPIYKNKPFVYLLITGLG 1021 (1054)
T ss_pred hhhhHHHhHHHHHHHHHHHH
Confidence 3211 23345555554433
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-115 Score=990.24 Aligned_cols=845 Identities=24% Similarity=0.405 Sum_probs=697.6
Q ss_pred CCCCChhhhhhc-ccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-cchHHHHHHhhhhhHHHHHHH
Q 044543 12 NNGISLEEIKKE-NVDLERIPINEVFEQLKCT-REGLSNEEGQKRLVIFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEI 88 (962)
Q Consensus 12 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~ 88 (962)
+++.++++.++| .+|.|++|.+|+++++.++ .+|||.+++.+++.+-|+|.++++| .+.|.+|++|+++.+.+++++
T Consensus 23 ~~~~~l~~~k~e~~~~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~ 102 (1019)
T KOG0203|consen 23 KKKKELDDLKKEVSMDDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWI 102 (1019)
T ss_pred chhhhHHHHhhheeeccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHH
Confidence 355578999999 8999999999999999998 7899999999999999999998776 567999999999999999999
Q ss_pred HHHHHHHHHcC-----CCCCCC-hhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcC
Q 044543 89 AAIMAIALANG-----GGKPPD-WQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILV 162 (962)
Q Consensus 89 ~ail~~~l~~~-----~~~~~~-~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv 162 (962)
+|+++++.+.. ..+..+ -+-+.++..++++..+..++|+.+..+-+++++++.|+.+.|+|||+...+.+++||
T Consensus 103 ~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelV 182 (1019)
T KOG0203|consen 103 GAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELV 182 (1019)
T ss_pred HHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcc
Confidence 99999874321 111122 233444556667788899999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCCeeecceEEEecCCeeEecccccCCCeeeecCC----------CCcccccceeecceEEEEEEEecchhH
Q 044543 163 PGDVISIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTKMP----------GDEVFSGSTCKQGEIEAVVIATGVHTF 232 (962)
Q Consensus 163 ~GDiI~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~----------g~~v~~Gs~v~~G~~~~~V~~tG~~T~ 232 (962)
|||+|.++-||+||||.|++++..+++|+|+|||||.|..+.+ .|+.|.+|.+.+|.++++|++||.+|.
T Consensus 183 vGD~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv 262 (1019)
T KOG0203|consen 183 VGDLVEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTV 262 (1019)
T ss_pred cccceeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceE
Confidence 9999999999999999999999999999999999999999987 367899999999999999999999999
Q ss_pred HHhHHHhhhc-cCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHH
Q 044543 233 FGKAAHLVDS-TNQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMA 311 (962)
Q Consensus 233 ~gki~~l~~~-~~~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~ 311 (962)
+|+++.+... ...++++++.++.+..+.....++ +.++++..-...+..|..++.+++.++++.+|++|+..++++++
T Consensus 263 ~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~-~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~Lt 341 (1019)
T KOG0203|consen 263 MGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIF-LGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVCLT 341 (1019)
T ss_pred EeehhhhhccCCCCCCcchhhhhchHHHHHHHHHH-HHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhhHH
Confidence 9999998865 467889999888887664332222 22222222222367888888889999999999999999999999
Q ss_pred HHHHHHhcCCcccccCchHHhhcCceEEEecccccccCCceEEEEEeeeeccc----------------CCChHHHHHHH
Q 044543 312 IGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVK----------------DMDKDTVILYG 375 (962)
Q Consensus 312 ~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~----------------~~~~~~~l~~a 375 (962)
.-++||+++++++|++.++|+||..++||+|||||||+|+|+|.+.+.+.... +..-..++..+
T Consensus 342 ltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~ 421 (1019)
T KOG0203|consen 342 LTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIA 421 (1019)
T ss_pred HHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999876431110 11113456667
Q ss_pred HHhccc---------------cCCChHHHHHHHhh----cChhhhhcCceEeeecCCCCCCceEEEEEEcCC---CCEEE
Q 044543 376 ARASRV---------------ENQDAIDACIVGML----GDAKEARAGITELHFLPFNPVEKRTAITYIDSD---GSWHR 433 (962)
Q Consensus 376 ~~~~~~---------------~~~~~~~~al~~~~----~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~---g~~~~ 433 (962)
..|++. ..+|+.|.|++++. ++..+.|+..+.+..+||||.+|+.-.+....+ .+..+
T Consensus 422 ~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l 501 (1019)
T KOG0203|consen 422 TLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLL 501 (1019)
T ss_pred HHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCcccee
Confidence 766643 23588999998875 455677888888999999999999887776544 57789
Q ss_pred EEeCcHHHHHHHhcc----------chHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCC-----------CCCCCCceE
Q 044543 434 ISKGAPEQIIELCNL----------REDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTK-----------ESPGGPWQF 492 (962)
Q Consensus 434 ~~KGa~e~il~~~~~----------~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~-----------~~~e~~l~l 492 (962)
..|||||.++++|+. ++...+.+++..+++...|-||++++++.++++++ .-...+|.|
T Consensus 502 ~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~F 581 (1019)
T KOG0203|consen 502 VMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRF 581 (1019)
T ss_pred eecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccc
Confidence 999999999999973 45667888889999999999999999999886542 234568999
Q ss_pred EEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCC------------c----------ccc
Q 044543 493 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP------------S----------SAL 550 (962)
Q Consensus 493 lG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~------------~----------~~l 550 (962)
+|++++-||||..+|+++.+||.|||||+|+|||++.||+++|++.||..+... . .++
T Consensus 582 lGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~Vi 661 (1019)
T KOG0203|consen 582 LGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVI 661 (1019)
T ss_pred cchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEE
Confidence 999999999999999999999999999999999999999999999997653211 0 112
Q ss_pred cccchhccCCcchHHHHhhhcc--eEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEcc-CchHHHHh
Q 044543 551 LGQIKDANISALPVDELIEKAD--GFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARG 627 (962)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~~~~--v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg-~gt~~a~~ 627 (962)
.|.++ ..++.+++++++.+.. ||||.||+||..||+..|++|.+|+++|||+||+||||+|||||||| .|+|++|+
T Consensus 662 hG~eL-~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKq 740 (1019)
T KOG0203|consen 662 HGSEL-PDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQ 740 (1019)
T ss_pred ecccc-cccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHh
Confidence 33322 3677889999998665 99999999999999999999999999999999999999999999999 99999999
Q ss_pred cccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhcCCchHHHHHHHHHHhhhc-hhcccc
Q 044543 628 ASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLI-ALIWKFDFSPFMVLIIAILNDGT-IMTISK 705 (962)
Q Consensus 628 aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~-~~~~~~~~~p~~il~i~l~~~~~-~~~l~~ 705 (962)
|||++|+||||++|+..|++||-+|+|+||.+.|.++.|++.+..++.+ .+..|.|+.++++|.|.+.+|++ +++++|
T Consensus 741 AADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAY 820 (1019)
T KOG0203|consen 741 AADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAY 820 (1019)
T ss_pred hcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhc
Confidence 9999999999999999999999999999999999999999877665554 55689999999999999999986 699999
Q ss_pred CCCCCC--------CCCCccchHHHHH-HHHHHHHHHHHHHHHHHHH-HHhhccccccc----------cccccCCCh--
Q 044543 706 DRVKPS--------PVPDTWKLKEIFA-TGIVLGTYLAVMTVLFFWA-IHSSTFFSEKF----------GVRSIRDSP-- 763 (962)
Q Consensus 706 d~~~~~--------~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~----------g~~~~~~~~-- 763 (962)
+..... |+.++.-..+++. .++..|+++++.+|+.|+. +...+|++... +++++.+++
T Consensus 821 E~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQ 900 (1019)
T KOG0203|consen 821 EKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQ 900 (1019)
T ss_pred cCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccc
Confidence 875322 2234443344444 4577899999999976655 55567766321 123333332
Q ss_pred -----------hHHHHHHHHHHHHHHHHHHhhhccCCCC--cccchhHHHHHHHHHHHHHHHHHHHhhc-cccccccchh
Q 044543 764 -----------HELTAAVYLQVSIVSQALIFVTRSRSWS--FLERPGLLLIAAFIIAQLVATLIAVYAN-FGFARIHGIG 829 (962)
Q Consensus 764 -----------~~~~t~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 829 (962)
.+.+|++|.++++.|.+..+.+.+++-+ -....|+.+++++++-.+++.++++-.. ...+++.++.
T Consensus 901 eWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~~pl~ 980 (1019)
T KOG0203|consen 901 EWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVLYALGMYPLK 980 (1019)
T ss_pred cccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHHHHhccCCCC
Confidence 2256888999999999887777776644 4466788999999888887777654322 2234678889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 044543 830 WGWVGVIWLYSIVFYIPLDVLKFIVRYAL 858 (962)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~K~~~r~~~ 858 (962)
|.||++.++++++.++.+|+.|+++|.+.
T Consensus 981 ~~~wl~a~P~~ilIfvydE~Rk~~IR~~P 1009 (1019)
T KOG0203|consen 981 FQWWLVAFPFGILIFVYDEVRKLFIRRYP 1009 (1019)
T ss_pred cEEEEecccceeeeeeHHHHHhHhhhhCC
Confidence 99999999999999999999999999886
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-104 Score=1008.58 Aligned_cols=787 Identities=18% Similarity=0.242 Sum_probs=589.0
Q ss_pred cCCCccCccccchH----HHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhhH
Q 044543 58 FGPNKLEEKKESKV----LKFLGFMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNA 133 (962)
Q Consensus 58 ~G~N~i~~~~~~~~----~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~ 133 (962)
|..|.+.+.||++| +.|++||.++++++|+++++++++.. ..+...+...++++++++++++.+++|+++++++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~--~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~ 78 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPI--LSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRR 78 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCC--cCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 67899999999876 78999999999999999999999832 2333345566677778889999999999999999
Q ss_pred HHHhhcCCCCeEEEEEC-CeEEEEECcCcCCCcEEEEeCCCeeecceEEEecCC----eeEecccccCCCeeeecCCC--
Q 044543 134 AAALMAGLAPQTKVLRD-GAWREQEASILVPGDVISIKLGDIIPADARLLDGDP----LKIDQSALTGESLPVTKMPG-- 206 (962)
Q Consensus 134 ~~~l~~~~~~~~~V~Rd-g~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~----~~Vdes~LTGEs~pv~K~~g-- 206 (962)
+++.+ .+.++|+|+ |++++++|+||+|||+|.|++||+||||++|+++++ |+||||+|||||+|+.|.+.
T Consensus 79 d~~~n---~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~ 155 (1057)
T TIGR01652 79 DKEVN---NRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEE 155 (1057)
T ss_pred HHHHh---CcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchh
Confidence 87654 589999997 899999999999999999999999999999998654 99999999999999998641
Q ss_pred ----------------------------------------------Ccccccceeec-ceEEEEEEEecchhHHHhHHHh
Q 044543 207 ----------------------------------------------DEVFSGSTCKQ-GEIEAVVIATGVHTFFGKAAHL 239 (962)
Q Consensus 207 ----------------------------------------------~~v~~Gs~v~~-G~~~~~V~~tG~~T~~gki~~l 239 (962)
|.+|+||.+++ |+++|+|++||.+|++++...
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~- 234 (1057)
T TIGR01652 156 TQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNAT- 234 (1057)
T ss_pred hhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCC-
Confidence 46899999999 899999999999998875321
Q ss_pred hhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc----cch---------------HhHHHHHHHHHHhccCC
Q 044543 240 VDSTNQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQH----RAY---------------RNGIDNLLVLLIGGIPI 300 (962)
Q Consensus 240 ~~~~~~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~----~~~---------------~~~~~~~l~lli~~iP~ 300 (962)
....+.+++++.++++..+++++.++++++..++.+.... ..| ...+..+++++..++|+
T Consensus 235 -~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPi 313 (1057)
T TIGR01652 235 -QAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPI 313 (1057)
T ss_pred -CCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcce
Confidence 2234789999999999877655444433333333222111 011 12566788999999999
Q ss_pred chHHHHHHHHHHHH------HHHhcC----CcccccCchHHhhcCceEEEecccccccCCceEEEEEeeee--cccCC--
Q 044543 301 AMPTVLSVTMAIGS------HRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEV--FVKDM-- 366 (962)
Q Consensus 301 aL~~~~~i~~~~~~------~~l~~~----~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~--~~~~~-- 366 (962)
+||+++++++++++ .+|.++ ++++|+++++|+||+|++||+|||||||+|+|+++++.+.. |..+.
T Consensus 314 sL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~ 393 (1057)
T TIGR01652 314 SLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTE 393 (1057)
T ss_pred eeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcch
Confidence 99999999999999 788864 59999999999999999999999999999999999997631 11000
Q ss_pred -----------------------------C----------------hHHHHHHHHHhccc--------------cCCChH
Q 044543 367 -----------------------------D----------------KDTVILYGARASRV--------------ENQDAI 387 (962)
Q Consensus 367 -----------------------------~----------------~~~~l~~a~~~~~~--------------~~~~~~ 387 (962)
+ ..+++..++.|+.. ..++|+
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~ 473 (1057)
T TIGR01652 394 IKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPD 473 (1057)
T ss_pred HHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCc
Confidence 0 02344455555432 125899
Q ss_pred HHHHHHhhcChh------------------hhhcCceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhcc-
Q 044543 388 DACIVGMLGDAK------------------EARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNL- 448 (962)
Q Consensus 388 ~~al~~~~~~~~------------------~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~- 448 (962)
|.|++.++...+ .....|++++.+||+|.|||||+++++++|++++++|||||.|+++|..
T Consensus 474 E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~ 553 (1057)
T TIGR01652 474 EAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSG 553 (1057)
T ss_pred HHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhcc
Confidence 999998764221 1224688899999999999999999998888999999999999999974
Q ss_pred chHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCC-------------------------CCCCCCceEEEEeecCCCCC
Q 044543 449 REDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTK-------------------------ESPGGPWQFVGLLPLFDPPR 503 (962)
Q Consensus 449 ~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~-------------------------~~~e~~l~llG~i~i~D~lr 503 (962)
+++.++.+.+++++|+.+|+|||++|||.+++++. +.+|++|+|+|+++++||||
T Consensus 554 ~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq 633 (1057)
T TIGR01652 554 GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQ 633 (1057)
T ss_pred chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhh
Confidence 34567788999999999999999999999876421 34689999999999999999
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcc-----------------------------------
Q 044543 504 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSS----------------------------------- 548 (962)
Q Consensus 504 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~----------------------------------- 548 (962)
+|++++|+.|++|||+|||+|||+++||++||++|||.++.....
T Consensus 634 ~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 713 (1057)
T TIGR01652 634 EGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSG 713 (1057)
T ss_pred hccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCC
Confidence 999999999999999999999999999999999999976432111
Q ss_pred ----cccccchhccCCc---chHHHHhhhcc--eEEecCHhhHHHHHHHHhhC-CCEEEEEcCCcCChhhhhcCCeeEEc
Q 044543 549 ----ALLGQIKDANISA---LPVDELIEKAD--GFAGVFPEHKYEIVRKLQER-KHICGMTGDGVNDAPALKKADIGIAV 618 (962)
Q Consensus 549 ----~l~~~~~~~~~~~---~~~~~~~~~~~--v~arvsP~qK~~iV~~lq~~-g~~v~miGDG~ND~~aLk~AdVGIam 618 (962)
++.|...+..+++ ..+.+++..++ ||||++|+||+++|+.+|+. |++|+|||||+||+||||+|||||++
T Consensus 714 ~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi 793 (1057)
T TIGR01652 714 NVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGI 793 (1057)
T ss_pred ceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEe
Confidence 2223222211111 12334454454 99999999999999999998 99999999999999999999999998
Q ss_pred -c-CchHHHHhcccccccCCCchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC----CchHHHHHH
Q 044543 619 -A-DATDAARGASDIVLTEPGLSVIVSAV-LTSRAIFQRMKNYTIYAVSITIRIVLGFLLIALIWKF----DFSPFMVLI 691 (962)
Q Consensus 619 -g-~gt~~a~~aaDivl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~~~~~~~----~~~p~~il~ 691 (962)
| +|.+ |+.+||+++.+ |+.+..++ .+||++|+|+++++.|.+++|+.+++..+++.++.+| ++.+++++|
T Consensus 794 ~g~eg~q-A~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~ 870 (1057)
T TIGR01652 794 SGKEGMQ-AVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVL 870 (1057)
T ss_pred cChHHHH-HHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 4 4555 55699999964 99999988 8899999999999999999999888888887776543 588889999
Q ss_pred HHHHhhhc-hhcccc-CCCCCC----CCCC---------ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccc
Q 044543 692 IAILNDGT-IMTISK-DRVKPS----PVPD---------TWKLKEIFATGIVLGTYLAVMTVLFFWAIHSSTFFSEKFGV 756 (962)
Q Consensus 692 i~l~~~~~-~~~l~~-d~~~~~----~~~~---------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~ 756 (962)
+|++++.+ +++++. |+..+. ..|. .++.+. |...++.|++++++++++.++.+...... .
T Consensus 871 ~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~-f~~~~~~~~~~~~ii~~~~~~~~~~~~~~-~--- 945 (1057)
T TIGR01652 871 YNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKT-FWGWMLDGIYQSLVIFFFPMFAYILGDFV-S--- 945 (1057)
T ss_pred HHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHcCCccc-c---
Confidence 99999876 577764 332211 1121 223334 44446789999998886655444321111 1
Q ss_pred cccCCChhHHHHHHHHHHHHHHHHH-HhhhccCCCCcccchhHHHHHHHHHHHHHHHHHHHhh-c---cccccccchhHH
Q 044543 757 RSIRDSPHELTAAVYLQVSIVSQAL-IFVTRSRSWSFLERPGLLLIAAFIIAQLVATLIAVYA-N---FGFARIHGIGWG 831 (962)
Q Consensus 757 ~~~~~~~~~~~t~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~ 831 (962)
.+...+.....+++|+.+.+..++. .+.++ +|+|......| +++++..++..++..+. . ++.+......+.
T Consensus 946 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~wt~~~~~~~~--~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 1021 (1057)
T TIGR01652 946 SGSLDDFSSVGVIVFTALVVIVNLKIALEIN--RWNWISLITIW--GSILVWLIFVIVYSSIFPSPAFYKAAPRVMGTFG 1021 (1057)
T ss_pred CCcccchhhHHHHHHHHHHHHHHHHHHHHHh--HhHHHHHHHHH--HHHHHHHHHHHHHHhhcccccHHHHHHHHHccHH
Confidence 1122245667778888877777665 34444 44432222111 11111111111111110 0 011111112455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhh
Q 044543 832 WVGVIWLYSIVFYIPLDVLKFIVRYALTGKAWD 864 (962)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~~~~ 864 (962)
+|+.+++..+++++|+.++|++.|.+.| ..++
T Consensus 1022 f~l~~ll~~~~~l~p~~~~~~~~~~~~P-~~~~ 1053 (1057)
T TIGR01652 1022 FWLVLLVIVLISLLPRFTYKAIQRLFRP-PDYD 1053 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCC-CHHH
Confidence 7777788888889999999998887775 4443
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-102 Score=974.89 Aligned_cols=785 Identities=16% Similarity=0.175 Sum_probs=580.1
Q ss_pred hhcCCCccCccccchH----HHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhh
Q 044543 56 VIFGPNKLEEKKESKV----LKFLGFMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAG 131 (962)
Q Consensus 56 ~~~G~N~i~~~~~~~~----~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~ 131 (962)
.+|..|.+.+.||++| +.+++||.++.|++|++++|++++. ...+...+...++++++++++++.+.+++++++
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip--~~s~~~~~t~~~PL~~vl~v~~ike~~Ed~~r~ 162 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLP--QLAVFGRGASILPLAFVLLVTAVKDAYEDWRRH 162 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCC--CcccCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3699999999999876 7889999999999999999999873 233344667788899999999999999999999
Q ss_pred hHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCeeecceEEEecCC----eeEecccccCCCeeeecCCC-
Q 044543 132 NAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDP----LKIDQSALTGESLPVTKMPG- 206 (962)
Q Consensus 132 ~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~----~~Vdes~LTGEs~pv~K~~g- 206 (962)
+++++.+ +.+++|+|+|++++++|++|+|||+|.|++||+||||++|+++++ |+||||+|||||+|+.|.++
T Consensus 163 k~d~~~N---~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~ 239 (1178)
T PLN03190 163 RSDRIEN---NRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQ 239 (1178)
T ss_pred HhHHhhc---CcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccc
Confidence 9987754 578999999999999999999999999999999999999998543 89999999999999999742
Q ss_pred --------------------------------------------Ccccccceeecc-eEEEEEEEecchhHHHhHHHhhh
Q 044543 207 --------------------------------------------DEVFSGSTCKQG-EIEAVVIATGVHTFFGKAAHLVD 241 (962)
Q Consensus 207 --------------------------------------------~~v~~Gs~v~~G-~~~~~V~~tG~~T~~gki~~l~~ 241 (962)
+.+++||.+++. +++|+|++||.+|+... +...
T Consensus 240 ~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~--N~~~ 317 (1178)
T PLN03190 240 ETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAML--NNSG 317 (1178)
T ss_pred hhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhh--cCCC
Confidence 457788888887 69999999999997422 1111
Q ss_pred ccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhccc-c---------------------c---h----HhHHHHH
Q 044543 242 STNQEGHFQKVLTAIGNFCICSIAIGMVIEIIVM--YPIQH-R---------------------A---Y----RNGIDNL 290 (962)
Q Consensus 242 ~~~~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~--~~~~~-~---------------------~---~----~~~~~~~ 290 (962)
...|.+++++.+|++..+++++.+++++++.++. |.... . + + ...+..+
T Consensus 318 ~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 397 (1178)
T PLN03190 318 APSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMS 397 (1178)
T ss_pred CCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHH
Confidence 1247899999999988775544443333332222 11100 0 0 0 1123334
Q ss_pred HHHHHhccCCchHHHHHHHHHHHHHHHhcCC----------cccccCchHHhhcCceEEEecccccccCCceEEEEEeee
Q 044543 291 LVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG----------AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVE 360 (962)
Q Consensus 291 l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~----------ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~ 360 (962)
++++..+||++|++++++++..++.++.++. +.||+.+.+|+||+|++||+|||||||+|+|++++|.+.
T Consensus 398 lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~ 477 (1178)
T PLN03190 398 VIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIW 477 (1178)
T ss_pred HHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEEC
Confidence 5777799999999999999998898887655 789999999999999999999999999999999999873
Q ss_pred e--ccc-----------------C----------C------------C-h-----HHHHHHHHHhccc------------
Q 044543 361 V--FVK-----------------D----------M------------D-K-----DTVILYGARASRV------------ 381 (962)
Q Consensus 361 ~--~~~-----------------~----------~------------~-~-----~~~l~~a~~~~~~------------ 381 (962)
. |.. + . + + .+++...+.|+..
T Consensus 478 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~ 557 (1178)
T PLN03190 478 GVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPT 557 (1178)
T ss_pred CEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCcc
Confidence 1 110 0 0 0 0 1245555555532
Q ss_pred ------cCCChHHHHHHHhhcCh----------------hhhhcCceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcH
Q 044543 382 ------ENQDAIDACIVGMLGDA----------------KEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAP 439 (962)
Q Consensus 382 ------~~~~~~~~al~~~~~~~----------------~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~ 439 (962)
...+|+|.|++.++.+. ...+..|++++.+||+|+|||||+++++++|++.+++||||
T Consensus 558 ~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~ 637 (1178)
T PLN03190 558 VKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGAD 637 (1178)
T ss_pred ccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCc
Confidence 11379999999987532 23456789999999999999999999988899999999999
Q ss_pred HHHHHHhccc--hHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCC-------------------------CCCCCCceE
Q 044543 440 EQIIELCNLR--EDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTK-------------------------ESPGGPWQF 492 (962)
Q Consensus 440 e~il~~~~~~--~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~-------------------------~~~e~~l~l 492 (962)
|.|+++|+.. ++.++++.+++++|+++|+|||++|||.++++++ +.+|++|++
T Consensus 638 e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~ 717 (1178)
T PLN03190 638 TSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTI 717 (1178)
T ss_pred HHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEE
Confidence 9999999742 4567788999999999999999999999976432 346899999
Q ss_pred EEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccc----------------------
Q 044543 493 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSAL---------------------- 550 (962)
Q Consensus 493 lG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l---------------------- 550 (962)
+|+++++||||+|++++|++|+++||+|||+|||+.+||++||++|||.++......+
T Consensus 718 lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~ 797 (1178)
T PLN03190 718 LGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKL 797 (1178)
T ss_pred EEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhc
Confidence 9999999999999999999999999999999999999999999999997654321111
Q ss_pred -------------------------cccchhccCC---cchHHHHhhhcc--eEEecCHhhHHHHHHHHhhC-CCEEEEE
Q 044543 551 -------------------------LGQIKDANIS---ALPVDELIEKAD--GFAGVFPEHKYEIVRKLQER-KHICGMT 599 (962)
Q Consensus 551 -------------------------~~~~~~~~~~---~~~~~~~~~~~~--v~arvsP~qK~~iV~~lq~~-g~~v~mi 599 (962)
.|...+..++ .+.+.++..++. ||||++|+||+++|+.+|++ +++|+||
T Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaI 877 (1178)
T PLN03190 798 TTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAI 877 (1178)
T ss_pred cccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 1111110011 123444555554 79999999999999999997 6899999
Q ss_pred cCCcCChhhhhcCCeeEEc-c-CchHHHHhcccccccCCCchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 600 GDGVNDAPALKKADIGIAV-A-DATDAARGASDIVLTEPGLSVIVSAV-LTSRAIFQRMKNYTIYAVSITIRIVLGFLLI 676 (962)
Q Consensus 600 GDG~ND~~aLk~AdVGIam-g-~gt~~a~~aaDivl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~ 676 (962)
|||+||+||||+|||||++ | +|.+|++ |||+++.+ |..+..++ .|||++|+|+.+.+.|.+++|+.+++..+++
T Consensus 878 GDGaNDv~mIq~AdVGIGIsG~EG~qA~~-aSDfaI~~--Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f 954 (1178)
T PLN03190 878 GDGANDVSMIQMADVGVGISGQEGRQAVM-ASDFAMGQ--FRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWY 954 (1178)
T ss_pred CCCcchHHHHHhcCeeeeecCchhHHHHH-hhccchhh--hHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998 5 7888777 99999955 66676665 5799999999999999999999999999999
Q ss_pred HHhhcCC----chHHHHHHHHHHhhhc-hhccc-cCCCCCC-------------CCCCccchHHHHHHHHHHHHHHHHHH
Q 044543 677 ALIWKFD----FSPFMVLIIAILNDGT-IMTIS-KDRVKPS-------------PVPDTWKLKEIFATGIVLGTYLAVMT 737 (962)
Q Consensus 677 ~~~~~~~----~~p~~il~i~l~~~~~-~~~l~-~d~~~~~-------------~~~~~~~~~~~~~~~~~~g~~~~~~~ 737 (962)
.++.+|. |.++.+.++|++++.+ ++.++ +|+..+. .+...++.+. |+..++.|++++++.
T Consensus 955 ~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~-F~~w~~~~i~qs~ii 1033 (1178)
T PLN03190 955 VLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKL-FWLTMIDTLWQSAVV 1033 (1178)
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHH-HHHHHHHHHHHHHHH
Confidence 9888774 6677788888776654 56664 4554332 1122334444 444577799999988
Q ss_pred HHHHHHHHhhccccccccccccCCChhHHHHHHHHHHHHHHHHH-HhhhccCCCCcccchhHHHHHHHHHHHHHHHHHHH
Q 044543 738 VLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQAL-IFVTRSRSWSFLERPGLLLIAAFIIAQLVATLIAV 816 (962)
Q Consensus 738 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 816 (962)
|++.++.+.... .+ .....+++++.++++.++. ++.+++ |+|......| +++++..++..++..
T Consensus 1034 ff~~~~~~~~~~----~~-------~~~~~~~~~~~~v~~vnl~i~~~~~~--wt~~~~~~i~--~Si~~~~i~~~~~~~ 1098 (1178)
T PLN03190 1034 FFVPLFAYWAST----ID-------GSSIGDLWTLAVVILVNLHLAMDIIR--WNWITHAAIW--GSIVATFICVIVIDA 1098 (1178)
T ss_pred HHHHHHHhcCCC----cC-------ceeEhHhhhhHHHHHHHHHHHHHHhh--hhHHHHHHHH--HHHHHHHHHHHHHHh
Confidence 866555442211 11 0112234444444444443 344444 4433222111 111111111111100
Q ss_pred ---hhc-cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhh
Q 044543 817 ---YAN-FGFARIHGIGWGWVGVIWLYSIVFYIPLDVLKFIVRYALTGKAWDNLLE 868 (962)
Q Consensus 817 ---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~~~~~~~~ 868 (962)
+.. +.+..+ ...+.+|+.+++..+++++|+.++|++.|.+.| ..++.+++
T Consensus 1099 ~~~~~~~~~~~~~-~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P-~~~~~~~~ 1152 (1178)
T PLN03190 1099 IPTLPGYWAIFHI-AKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTP-CDVQIARE 1152 (1178)
T ss_pred cccchhHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CHHHHHHH
Confidence 000 111111 124557777788888899999999998888876 44554443
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-94 Score=857.23 Aligned_cols=545 Identities=23% Similarity=0.369 Sum_probs=452.4
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHcCCC--CCCCh--hhHHHHHHHHHHHHHHHHHH----HHhhhhHHHHhhcCCCC-eEE
Q 044543 76 GFMWNPLSWVMEIAAIMAIALANGGG--KPPDW--QDFVGIVVLLLINSTISFIE----ENNAGNAAAALMAGLAP-QTK 146 (962)
Q Consensus 76 ~~~~~~~~~~l~~~ail~~~l~~~~~--~~~~~--~~~~~i~~~~~i~~~i~~~~----e~~~~~~~~~l~~~~~~-~~~ 146 (962)
.+++||+.|+++++++++++++.... ....| .+.+.|.++++++.+++.++ |+|+++++++|++..++ +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 46899999999999999998763210 11122 45667777777787777776 78999999999998886 776
Q ss_pred -EEECCeEEEEECcCcCCCcEEEEeCCCeeecceEEEecCCeeEecccccCCCeeeecCCC---CcccccceeecceEEE
Q 044543 147 -VLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTKMPG---DEVFSGSTCKQGEIEA 222 (962)
Q Consensus 147 -V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g---~~v~~Gs~v~~G~~~~ 222 (962)
|.|||++++|++++|+|||+|.|++||+|||||+|++| ...||||+|||||.|+.|++| +.+|+||.+.+|++.+
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i 186 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKG-LATVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEV 186 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEc-ceEEecchhcCCCCceeccCCCccCeeecCceeecceEEE
Confidence 77999999999999999999999999999999999999 469999999999999999999 8899999999999999
Q ss_pred EEEEecchhHHHhHHHhhhccC-CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cccchHhHHHHHHHHHHhccCC
Q 044543 223 VVIATGVHTFFGKAAHLVDSTN-QEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPI-QHRAYRNGIDNLLVLLIGGIPI 300 (962)
Q Consensus 223 ~V~~tG~~T~~gki~~l~~~~~-~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~l~lli~~iP~ 300 (962)
+|+++|.+|++||+++++++++ +++|+|..+..+...+.+ ++++++ +..+.. ....+...+...+++++++|||
T Consensus 187 ~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~i--i~l~~~--~~~~~~~~~~~~~~~~~~~val~V~~IP~ 262 (673)
T PRK14010 187 EITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTI--IFLVVI--LTMYPLAKFLNFNLSIAMLIALAVCLIPT 262 (673)
T ss_pred EEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhH--HHHHHH--HHHHHHHhhccHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999998874 788888766554332211 111111 111111 1123444567778888899999
Q ss_pred chHHHHHHHHHHHHHHHhcCCcccccCchHHhhcCceEEEecccccccCCceEEEEEeeeecccCCChHHHHHHHHHhcc
Q 044543 301 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASR 380 (962)
Q Consensus 301 aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~ 380 (962)
+||..++++.+.|+.+|+++|+++|+++++|+||++|++|||||||||+|++.+.+... ..+.+.++++..++.++.
T Consensus 263 aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~---~~~~~~~~ll~~a~~~~~ 339 (673)
T PRK14010 263 TIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIP---VKSSSFERLVKAAYESSI 339 (673)
T ss_pred hHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEe---CCCccHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999998776665431 224456677777777765
Q ss_pred ccCCChHHHHHHHhhcChhhhhcCceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhccc-hHHHHHHHHH
Q 044543 381 VENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNLR-EDVRNKAHTI 459 (962)
Q Consensus 381 ~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-~~~~~~~~~~ 459 (962)
. ..||++.|++.++...... ......++.||++.+|+|++.+ +|+ .+.||+++.++++|... ...+..+.+.
T Consensus 340 ~-s~~P~~~AIv~~a~~~~~~-~~~~~~~~~pF~~~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~ 412 (673)
T PRK14010 340 A-DDTPEGRSIVKLAYKQHID-LPQEVGEYIPFTAETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDAL 412 (673)
T ss_pred C-CCChHHHHHHHHHHHcCCC-chhhhcceeccccccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHHHH
Confidence 4 4599999999877532110 0111235689999999999864 243 56699999999999742 1223446667
Q ss_pred HHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhC
Q 044543 460 IDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLG 539 (962)
Q Consensus 460 i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~G 539 (962)
+++++++|+|+++++. +++++|+++++||+|+|++++|++||++||+++|+||||+.||.++|+++|
T Consensus 413 ~~~~a~~G~~~l~v~~-------------~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elG 479 (673)
T PRK14010 413 VKGVSKKGGTPLVVLE-------------DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAG 479 (673)
T ss_pred HHHHHhCCCeEEEEEE-------------CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcC
Confidence 7889999999999874 348999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEcc
Q 044543 540 MGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVA 619 (962)
Q Consensus 540 i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg 619 (962)
|. ++|||++||||.++|+.+|++|++|+|||||+||+|||++||||||||
T Consensus 480 I~------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg 529 (673)
T PRK14010 480 VD------------------------------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN 529 (673)
T ss_pred Cc------------------------------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC
Confidence 84 379999999999999999999999999999999999999999999999
Q ss_pred CchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 620 DATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIAL 678 (962)
Q Consensus 620 ~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~~~ 678 (962)
+|+|+||++||+||++|+|++|++++++||++|.|+++++.|.++.|++.++..+...|
T Consensus 530 sGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~ 588 (673)
T PRK14010 530 SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMF 588 (673)
T ss_pred CCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987766554444
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-97 Score=898.34 Aligned_cols=786 Identities=18% Similarity=0.221 Sum_probs=598.3
Q ss_pred HHhhcCCCccCccccchH----HHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Q 044543 54 RLVIFGPNKLEEKKESKV----LKFLGFMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENN 129 (962)
Q Consensus 54 r~~~~G~N~i~~~~~~~~----~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~ 129 (962)
+...|-.|.+.+.||+++ +++++||.++.|++|++.++++++. .++...|...+++++++.++++.+.+|+++
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip---~~~~~~~~~~~pl~~vl~~t~iKd~~eD~r 104 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP---LSPFNPYTTLVPLLFVLGITAIKDAIEDYR 104 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc---ccccCccceeeceeeeehHHHHHHHHhhhh
Confidence 555899999999999875 7899999999999999999999984 335668888999999999999999999999
Q ss_pred hhhHHHHhhcCCCCeEEEEECCe-EEEEECcCcCCCcEEEEeCCCeeecceEEEecCC----eeEecccccCCCeeeecC
Q 044543 130 AGNAAAALMAGLAPQTKVLRDGA-WREQEASILVPGDVISIKLGDIIPADARLLDGDP----LKIDQSALTGESLPVTKM 204 (962)
Q Consensus 130 ~~~~~~~l~~~~~~~~~V~Rdg~-~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~----~~Vdes~LTGEs~pv~K~ 204 (962)
+++.+..++ ..++.|.|++. +++..|++|+|||+|.+..++.+|||.+|+++++ |+|++++|+||++++.|+
T Consensus 105 R~~~D~~iN---~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~ 181 (1151)
T KOG0206|consen 105 RHKQDKEVN---NRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQ 181 (1151)
T ss_pred hhhccHHhh---cceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceee
Confidence 999987655 57899998644 8999999999999999999999999999998754 999999999999999886
Q ss_pred C-----------------------------------------------CCcccccceeecce-EEEEEEEecchhHHHhH
Q 044543 205 P-----------------------------------------------GDEVFSGSTCKQGE-IEAVVIATGVHTFFGKA 236 (962)
Q Consensus 205 ~-----------------------------------------------g~~v~~Gs~v~~G~-~~~~V~~tG~~T~~gki 236 (962)
. .+++++|+++++++ ++|+|++||++|++++.
T Consensus 182 ~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n 261 (1151)
T KOG0206|consen 182 ALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQN 261 (1151)
T ss_pred ehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHh
Confidence 4 13578999999975 89999999999987653
Q ss_pred HHhhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-------------c-----chHhHHHHHHHHHHhcc
Q 044543 237 AHLVDSTNQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQH-------------R-----AYRNGIDNLLVLLIGGI 298 (962)
Q Consensus 237 ~~l~~~~~~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~-------------~-----~~~~~~~~~l~lli~~i 298 (962)
... ...+++.+++.++.+...+++++++.+++..+....... . .....+..+++++...+
T Consensus 262 ~~~--~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~li 339 (1151)
T KOG0206|consen 262 SGK--PPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLI 339 (1151)
T ss_pred cCC--CccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceE
Confidence 322 335788899999988766555444433333322211110 0 11224566788899999
Q ss_pred CCchHHHHHHHHHHHHHHHh----------cCCcccccCchHHhhcCceEEEecccccccCCceEEEEEeeeecccCC--
Q 044543 299 PIAMPTVLSVTMAIGSHRLS----------QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDM-- 366 (962)
Q Consensus 299 P~aL~~~~~i~~~~~~~~l~----------~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~-- 366 (962)
|++|++++++...+++.... ...+.+|+.+..|+||+|++|++|||||||+|.|++++|.++....+.
T Consensus 340 PISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~ 419 (1151)
T KOG0206|consen 340 PISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNV 419 (1151)
T ss_pred EEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCC
Confidence 99999999999999984433 457899999999999999999999999999999999999985322110
Q ss_pred C------------------------------------------hHHHHHHHHHhccc-------------cCCChHHHHH
Q 044543 367 D------------------------------------------KDTVILYGARASRV-------------ENQDAIDACI 391 (962)
Q Consensus 367 ~------------------------------------------~~~~l~~a~~~~~~-------------~~~~~~~~al 391 (962)
+ ..++....+.|+.. +.++|+|.|+
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~Al 499 (1151)
T KOG0206|consen 420 TEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAAL 499 (1151)
T ss_pred ChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHH
Confidence 0 01233444444421 2257999999
Q ss_pred HHhhcChhh----------------hhcCceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhc-cchHHHH
Q 044543 392 VGMLGDAKE----------------ARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCN-LREDVRN 454 (962)
Q Consensus 392 ~~~~~~~~~----------------~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~-~~~~~~~ 454 (962)
+.++++..- ....|+.++.+||+|+||||||++++++|+..++||||+.+|++++. +.....+
T Consensus 500 V~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e 579 (1151)
T KOG0206|consen 500 VEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLRE 579 (1151)
T ss_pred HHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHH
Confidence 998753211 24589999999999999999999999999999999999999999998 5567888
Q ss_pred HHHHHHHHHHhcCCeEEEEEeecCCCCC-------------------------CCCCCCCceEEEEeecCCCCCccHHHH
Q 044543 455 KAHTIIDKFADRGLRSLAVAEQSVPEKT-------------------------KESPGGPWQFVGLLPLFDPPRHDSAET 509 (962)
Q Consensus 455 ~~~~~i~~~a~~GlR~L~~A~~~~~~~~-------------------------~~~~e~~l~llG~i~i~D~lr~~~~~~ 509 (962)
+..+++++||.+||||||+|||++++++ ++.+|++|+++|.+++||++|+||||+
T Consensus 580 ~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPet 659 (1151)
T KOG0206|consen 580 KTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPET 659 (1151)
T ss_pred HHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHH
Confidence 9999999999999999999999999865 256799999999999999999999999
Q ss_pred HHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccc-------------------------------------
Q 044543 510 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLG------------------------------------- 552 (962)
Q Consensus 510 I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~------------------------------------- 552 (962)
|+.|++||||+||+|||+.+||++||.+|++..+.+....+..
T Consensus 660 I~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 739 (1151)
T KOG0206|consen 660 IAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEK 739 (1151)
T ss_pred HHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcC
Confidence 9999999999999999999999999999999876443222211
Q ss_pred --------cchhccCCcchHHHH-----hhhcceEEecCHhhHHHHHHHHhh-CCCEEEEEcCCcCChhhhhcCCeeEEc
Q 044543 553 --------QIKDANISALPVDEL-----IEKADGFAGVFPEHKYEIVRKLQE-RKHICGMTGDGVNDAPALKKADIGIAV 618 (962)
Q Consensus 553 --------~~~~~~~~~~~~~~~-----~~~~~v~arvsP~qK~~iV~~lq~-~g~~v~miGDG~ND~~aLk~AdVGIam 618 (962)
......++++..... -+++.+|||++|.||+.+|+..++ .+.++++||||+||++|+++|||||++
T Consensus 740 ~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGI 819 (1151)
T KOG0206|consen 740 PFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGI 819 (1151)
T ss_pred CceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeee
Confidence 111111111111111 135679999999999999999985 489999999999999999999999999
Q ss_pred c--CchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC----chHHHHHHH
Q 044543 619 A--DATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIALIWKFD----FSPFMVLII 692 (962)
Q Consensus 619 g--~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~~~~~~~~----~~p~~il~i 692 (962)
+ +|.+|++ +||+.+.+++|.....++| |||.|.|+.+++.|.+++|+.+.+..+++.++.+|. +.++++.++
T Consensus 820 sG~EGmQAvm-sSD~AIaqFrfL~rLLLVH-GhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~ly 897 (1151)
T KOG0206|consen 820 SGQEGMQAVM-SSDFAIAQFRFLERLLLVH-GHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLY 897 (1151)
T ss_pred ccchhhhhhh-cccchHHHHHHHhhhheee-cceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEE
Confidence 4 7888887 9999998887776665555 999999999999999999999999999999998874 566677777
Q ss_pred HHHhhh-chhcccc-CCCCCC------C-------CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccc
Q 044543 693 AILNDG-TIMTISK-DRVKPS------P-------VPDTWKLKEIFATGIVLGTYLAVMTVLFFWAIHSSTFFSEKFGVR 757 (962)
Q Consensus 693 ~l~~~~-~~~~l~~-d~~~~~------~-------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~ 757 (962)
|++.+. +++.+|. |+..+. | ....++.+ .|+..++.|+++++++|++++..+... . .+.+
T Consensus 898 Nv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~-~f~~~~~~g~~~sli~Ff~~~~~~~~~-~---~~~~ 972 (1151)
T KOG0206|consen 898 NVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWK-RFWGWMLDGFYQSLVIFFLPYLVFEEQ-A---VTSN 972 (1151)
T ss_pred eEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchH-HHHHHHHHHHHhheeeeeeeHhhheee-e---eccC
Confidence 776655 4678875 332221 1 11233444 455557779999999998777766432 1 1112
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHH-HhhhccCCCCcccchhHHHHHHHHHHHHHHHHHHHhhc-----------cccccc
Q 044543 758 SIRDSPHELTAAVYLQVSIVSQAL-IFVTRSRSWSFLERPGLLLIAAFIIAQLVATLIAVYAN-----------FGFARI 825 (962)
Q Consensus 758 ~~~~~~~~~~t~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----------~~~~~~ 825 (962)
+...++....+.+|+.+++...+. ++.+.+ |.|+. ++.+++.++..++..+ +|.. .+++..
T Consensus 973 G~~~d~~~~G~~~~T~~Vivv~~~iaL~~~y--wT~i~---~i~i~gSi~~~f~f~~--iy~~~~~~~~~~~~~~~~~~~ 1045 (1151)
T KOG0206|consen 973 GLTADYWTLGTTVFTIIVIVVNLKIALETSY--WTWIN---HIVIWGSILLWFVFLF--IYSELTPAISTPDPFYGVAEH 1045 (1151)
T ss_pred CCcCChhhccceEEEEEEEEEEeeeeeeehh--eeHHH---HHHHHHHHHHHHHHHH--HHhccccccCCCccHHHHHHH
Confidence 222234445555666555554443 334444 44332 2333333333222222 2211 112223
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCch
Q 044543 826 HGIGWGWVGVIWLYSIVFYIPLDVLKFIVRYALTGK 861 (962)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~ 861 (962)
......+|+++++.++++++|+.++|++.+.++|..
T Consensus 1046 ~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~ 1081 (1151)
T KOG0206|consen 1046 LLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTD 1081 (1151)
T ss_pred HhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcH
Confidence 334556888889999999999999999998888744
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-91 Score=832.67 Aligned_cols=537 Identities=25% Similarity=0.329 Sum_probs=452.4
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHcCC----C---CCCChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCC-eEE
Q 044543 75 LGFMWNPLSWVMEIAAIMAIALANGG----G---KPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAP-QTK 146 (962)
Q Consensus 75 l~~~~~~~~~~l~~~ail~~~l~~~~----~---~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~-~~~ 146 (962)
..||+||+.++++++++++++++... + ....|...+.+++.+++...++.++|+|++++.++|++..+. +++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 35789999999999999999876311 1 112344445555566667777889999999999999998775 799
Q ss_pred EEECCe-EEEEECcCcCCCcEEEEeCCCeeecceEEEecCCeeEecccccCCCeeeecCCCCc---ccccceeecceEEE
Q 044543 147 VLRDGA-WREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTKMPGDE---VFSGSTCKQGEIEA 222 (962)
Q Consensus 147 V~Rdg~-~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g~~---v~~Gs~v~~G~~~~ 222 (962)
|+|||+ +++|++++|+|||+|.|++||+|||||+|++| .+.||||+|||||.|+.|++|+. +|+||.+.+|++.+
T Consensus 108 vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG-~a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i 186 (679)
T PRK01122 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVI 186 (679)
T ss_pred EEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEc-cEEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEE
Confidence 999988 99999999999999999999999999999999 57999999999999999999988 99999999999999
Q ss_pred EEEEecchhHHHhHHHhhhcc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCc
Q 044543 223 VVIATGVHTFFGKAAHLVDST-NQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIA 301 (962)
Q Consensus 223 ~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~a 301 (962)
+|+++|.+|++||+.++++++ .+++++|..++.+..++...+++.++....+.++ .+.. .++..++++++++|||+
T Consensus 187 ~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~-~g~~--~~l~~~iallV~aiP~a 263 (679)
T PRK01122 187 RITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAY-SGGA--LSITVLVALLVCLIPTT 263 (679)
T ss_pred EEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-hCch--HHHHHHHHHHHHcccch
Confidence 999999999999999999887 4678999877776554433222222221111111 1222 36788899999999999
Q ss_pred hHHHHHHHHHHHHHHHhcCCcccccCchHHhhcCceEEEecccccccCCceEEEEEeeeecccCCChHHHHHHHHHhccc
Q 044543 302 MPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRV 381 (962)
Q Consensus 302 L~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~ 381 (962)
|+..++++...|+.+|+++|+++|++.++|+||++|++|||||||||+|+|++.+... ..+.++++++.+++.++..
T Consensus 264 lg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~a~~~s~~ 340 (679)
T PRK01122 264 IGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLP---VPGVTEEELADAAQLSSLA 340 (679)
T ss_pred hhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEe---CCCCCHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999999999988652 2356677788888777765
Q ss_pred cCCChHHHHHHHhhcCh---hhhhcCceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhccc-hHHHHHHH
Q 044543 382 ENQDAIDACIVGMLGDA---KEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNLR-EDVRNKAH 457 (962)
Q Consensus 382 ~~~~~~~~al~~~~~~~---~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-~~~~~~~~ 457 (962)
.+ ||.+.|++.++... ......++..++.||++.++++++.+ +| ..++||++|.+++.|+.. .+.+++++
T Consensus 341 s~-hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~ 414 (679)
T PRK01122 341 DE-TPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELD 414 (679)
T ss_pred CC-CchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHH
Confidence 54 89999999877531 11111244567899999988887653 34 578999999999999642 23456778
Q ss_pred HHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHH
Q 044543 458 TIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR 537 (962)
Q Consensus 458 ~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~ 537 (962)
+.+++++++|+|++++|++ ++++|+++++||+|+|++++|++||++||+++|+||||+.||.+||++
T Consensus 415 ~~~~~~a~~G~~~l~va~~-------------~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~e 481 (679)
T PRK01122 415 AAVDEVARKGGTPLVVAED-------------NRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE 481 (679)
T ss_pred HHHHHHHhCCCcEEEEEEC-------------CeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH
Confidence 8889999999999999973 489999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEE
Q 044543 538 LGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIA 617 (962)
Q Consensus 538 ~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIa 617 (962)
+||. ++|||++||||.++|+.+|++|++|+|+|||+||+|||++||||||
T Consensus 482 lGId------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIA 531 (679)
T PRK01122 482 AGVD------------------------------DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVA 531 (679)
T ss_pred cCCc------------------------------EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEE
Confidence 9984 2699999999999999999999999999999999999999999999
Q ss_pred ccCchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 618 VADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITI 667 (962)
Q Consensus 618 mg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni 667 (962)
||+|||+||++||+|+++++|++|++++++||++.-.--....|++..-+
T Consensus 532 MgsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~ 581 (679)
T PRK01122 532 MNSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDV 581 (679)
T ss_pred eCCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHH
Confidence 99999999999999999999999999999999998555555667665444
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-89 Score=791.71 Aligned_cols=679 Identities=23% Similarity=0.333 Sum_probs=517.8
Q ss_pred HHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCccccchHHHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCCCChhhHHHH
Q 044543 33 NEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKKESKVLKFLGFMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGI 112 (962)
Q Consensus 33 ~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~i 112 (962)
.+.++......+||+..++.+|+..||+|.+..+.++.+..++++..+|+ ++|.+.++.-|... .+++++..|
T Consensus 148 ~~~~~~~~~~~~gL~~~~~~~r~~iyG~N~i~l~ik~i~~iLv~EvL~Pf-YlFQ~fSv~lW~~d------~Y~~YA~cI 220 (1140)
T KOG0208|consen 148 PRWYSTESYVSNGLERQEIIDRRIIYGRNVISLPIKSISQILVKEVLNPF-YLFQAFSVALWLAD------SYYYYAFCI 220 (1140)
T ss_pred hhhhccceeccCCccHHHHHhHHhhcCCceeeeecccHHHHHHHhccchH-HHHHhHHhhhhhcc------cchhhhhHH
Confidence 34444455557899999999999999999999999999999999999999 66776666666532 355566668
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEeC-CCeeecceEEEecCCeeEec
Q 044543 113 VVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKL-GDIIPADARLLDGDPLKIDQ 191 (962)
Q Consensus 113 ~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~-Gd~VPaD~~ll~g~~~~Vde 191 (962)
+++.+.+...+.+|.++..+.++.+-+ ....++|+|||.|++|+++|||||||+.+.+ |-..|||++|++| +|.|||
T Consensus 221 ~iisv~Si~~sv~e~r~qs~rlr~mv~-~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g-~civNE 298 (1140)
T KOG0208|consen 221 VIISVYSIVLSVYETRKQSIRLRSMVK-FTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISG-DCIVNE 298 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeC-cEEeec
Confidence 888888999999999999988887654 4568999999999999999999999999988 9999999999999 689999
Q ss_pred ccccCCCeeeecCCC-------------------Ccccccceeec------ceEEEEEEEecchhHHHhHHHhhhccCCC
Q 044543 192 SALTGESLPVTKMPG-------------------DEVFSGSTCKQ------GEIEAVVIATGVHTFFGKAAHLVDSTNQE 246 (962)
Q Consensus 192 s~LTGEs~pv~K~~g-------------------~~v~~Gs~v~~------G~~~~~V~~tG~~T~~gki~~l~~~~~~~ 246 (962)
|+|||||.|+.|.+- +.+|.||.+.+ |.+.++|++||.+|..|++.+.+-.. ++
T Consensus 299 smLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyP-kP 377 (1140)
T KOG0208|consen 299 SMLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYP-KP 377 (1140)
T ss_pred ccccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCC-CC
Confidence 999999999999873 46899999986 56999999999999999877666543 33
Q ss_pred ChHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCcccc
Q 044543 247 GHFQKVLTAIGNFCIC-SIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 325 (962)
Q Consensus 247 ~~l~~~~~~i~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk 325 (962)
.+++-..+.+..+... .+++..++..++.+...+.+....+..++.++...+|+|||.++++...++..||.|+||+|-
T Consensus 378 ~~fkfyrds~~fi~~l~~ia~~gfiy~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCi 457 (1140)
T KOG0208|consen 378 VNFKFYRDSFKFILFLVIIALIGFIYTAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCI 457 (1140)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEc
Confidence 4444444443222111 111111111122223456778888999999999999999999999999999999999999999
Q ss_pred cCchHHhhcCceEEEecccccccCCceEEEEEeeeecc-c-C----------------------CCh-HHHHHHHHHhcc
Q 044543 326 RMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFV-K-D----------------------MDK-DTVILYGARASR 380 (962)
Q Consensus 326 ~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~-~-~----------------------~~~-~~~l~~a~~~~~ 380 (962)
+++.+...|++|++|||||||||++.+.+-...+..-. . + ..+ ..+....+.|+.
T Consensus 458 sP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHS 537 (1140)
T KOG0208|consen 458 SPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHS 537 (1140)
T ss_pred CccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhce
Confidence 99999999999999999999999999988765431000 0 0 001 122233333432
Q ss_pred c------cCCChHHHHHHHhhc------------------------Chhh--------hh-cCceEeeecCCCCCCceEE
Q 044543 381 V------ENQDAIDACIVGMLG------------------------DAKE--------AR-AGITELHFLPFNPVEKRTA 421 (962)
Q Consensus 381 ~------~~~~~~~~al~~~~~------------------------~~~~--------~~-~~~~~l~~~pF~s~~kr~s 421 (962)
. ..+||+|.-+.+..+ +|.+ .. ..+.+++.+||+|.-+|||
T Consensus 538 L~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMS 617 (1140)
T KOG0208|consen 538 LTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMS 617 (1140)
T ss_pred eEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEE
Confidence 1 124666655443221 0100 01 1477889999999999999
Q ss_pred EEEEcC-CCCEEEEEeCcHHHHHHHhccchHHHHHHHHHHHHHHhcCCeEEEEEeecCCCC--------CCCCCCCCceE
Q 044543 422 ITYIDS-DGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEK--------TKESPGGPWQF 492 (962)
Q Consensus 422 v~~~~~-~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~--------~~~~~e~~l~l 492 (962)
|++.++ +.+...|+|||||.|.++|+. +.+++.+++.++.|+.+|+|++|+|+|.++.. .++..|.+|+|
T Consensus 618 VIv~~~~e~~~~~ftKGaPE~I~~ic~p-~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~F 696 (1140)
T KOG0208|consen 618 VIVSTGGEDKMMVFTKGAPESIAEICKP-ETVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEF 696 (1140)
T ss_pred EEEecCCCCceEeeccCCHHHHHHhcCc-ccCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhcccee
Confidence 999975 467899999999999999984 67888999999999999999999999999876 36788999999
Q ss_pred EEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCccc-----------------------
Q 044543 493 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA----------------------- 549 (962)
Q Consensus 493 lG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~----------------------- 549 (962)
+|++.||+++|++++.+|++|++|+|+++|+||||..||..+||+|||.......-.
T Consensus 697 lGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~ 776 (1140)
T KOG0208|consen 697 LGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQT 776 (1140)
T ss_pred eEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCcc
Confidence 999999999999999999999999999999999999999999999999753211000
Q ss_pred -ccccch------------h--------ccCC-----------cchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEE
Q 044543 550 -LLGQIK------------D--------ANIS-----------ALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICG 597 (962)
Q Consensus 550 -l~~~~~------------~--------~~~~-----------~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~ 597 (962)
..+... + -.++ .+.+++++.+.+|||||+|+||.++|+.||+-|+.|+
T Consensus 777 ~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~Vg 856 (1140)
T KOG0208|consen 777 QFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVG 856 (1140)
T ss_pred ccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEE
Confidence 000000 0 0111 2235677789999999999999999999999999999
Q ss_pred EEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 598 MTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIA 677 (962)
Q Consensus 598 miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~~ 677 (962)
|||||+||+.|||+|||||+++++. |.-||.+.-.-++.+.+++.|++||...-.--..+.|...+.+..++..++.
T Consensus 857 fCGDGANDCgALKaAdvGISLSeaE--ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~~L- 933 (1140)
T KOG0208|consen 857 FCGDGANDCGALKAADVGISLSEAE--ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVVFL- 933 (1140)
T ss_pred ecCCCcchhhhhhhcccCcchhhhh--HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhhee-
Confidence 9999999999999999999998643 3447788877789999999999999987766666667655554333222111
Q ss_pred HhhcCCchHHHHHHHHHHhhhc-hhcccc----CCCCCCCCCCccchHHHHHH
Q 044543 678 LIWKFDFSPFMVLIIAILNDGT-IMTISK----DRVKPSPVPDTWKLKEIFAT 725 (962)
Q Consensus 678 ~~~~~~~~p~~il~i~l~~~~~-~~~l~~----d~~~~~~~~~~~~~~~~~~~ 725 (962)
..-+..+..+|.+++.++-..+ +..++. ++..+.|+|...-.++.+..
T Consensus 934 Y~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP~~~L~s~~~~~~ 986 (1140)
T KOG0208|consen 934 YLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRPPTNLLSKKILVP 986 (1140)
T ss_pred eeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCCCccccccchhhh
Confidence 1123567788888888876544 344432 34445555555444444433
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-87 Score=793.14 Aligned_cols=543 Identities=23% Similarity=0.325 Sum_probs=454.7
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHcC----C--CCCCChhhH---HHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCC-e
Q 044543 75 LGFMWNPLSWVMEIAAIMAIALANG----G--GKPPDWQDF---VGIVVLLLINSTISFIEENNAGNAAAALMAGLAP-Q 144 (962)
Q Consensus 75 l~~~~~~~~~~l~~~ail~~~l~~~----~--~~~~~~~~~---~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~-~ 144 (962)
..||.||+.++++++++++++++.. + +....|++. +.+++.+++...++.++|+|++++.++|++..++ .
T Consensus 27 ~~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~ 106 (675)
T TIGR01497 27 KAQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTF 106 (675)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 3478999999999999999987531 1 111246664 3344456777888889999999999999998876 4
Q ss_pred EEEEE-CCeEEEEECcCcCCCcEEEEeCCCeeecceEEEecCCeeEecccccCCCeeeecCCCCc---ccccceeecceE
Q 044543 145 TKVLR-DGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTKMPGDE---VFSGSTCKQGEI 220 (962)
Q Consensus 145 ~~V~R-dg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g~~---v~~Gs~v~~G~~ 220 (962)
++|+| ||++++|++++|+|||+|.+++||+|||||++++| .+.||||+|||||.|+.|++|+. +|+||.+.+|++
T Consensus 107 a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~ 185 (675)
T TIGR01497 107 AKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEG-VASVDESAITGESAPVIKESGGDFASVTGGTRILSDWL 185 (675)
T ss_pred EEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEc-cEEEEcccccCCCCceeecCCCCcceeecCcEEEeeEE
Confidence 88885 89999999999999999999999999999999999 68999999999999999999985 899999999999
Q ss_pred EEEEEEecchhHHHhHHHhhhcc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccC
Q 044543 221 EAVVIATGVHTFFGKAAHLVDST-NQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIP 299 (962)
Q Consensus 221 ~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP 299 (962)
.++|+++|.+|++||+.++++.+ .+++|+|..++.+..++.+++++.++. +..+..+. ....++..++++++++||
T Consensus 186 ~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~--~~~~~~~~-~~~~~~~~lvallV~aiP 262 (675)
T TIGR01497 186 VVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTAT--LWPFAAYG-GNAISVTVLVALLVCLIP 262 (675)
T ss_pred EEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhc-ChhHHHHHHHHHHHHhCc
Confidence 99999999999999999999876 467899988777665543222221111 11111111 112356777899999999
Q ss_pred CchHHHHHHHHHHHHHHHhcCCcccccCchHHhhcCceEEEecccccccCCceEEEEEeeeecccCCChHHHHHHHHHhc
Q 044543 300 IAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARAS 379 (962)
Q Consensus 300 ~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~ 379 (962)
|+|+...+.+...|+.+|+++|+++|++.++|+||++|++|||||||||+|+|++.++.. ..+.+.++++.+++.++
T Consensus 263 ~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~aa~~~ 339 (675)
T TIGR01497 263 TTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIP---AQGVDEKTLADAAQLAS 339 (675)
T ss_pred hhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEe---cCCCcHHHHHHHHHHhc
Confidence 998888887777899999999999999999999999999999999999999999988652 23566778888888877
Q ss_pred cccCCChHHHHHHHhhcChhh--hhcCceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhccc-hHHHHHH
Q 044543 380 RVENQDAIDACIVGMLGDAKE--ARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNLR-EDVRNKA 456 (962)
Q Consensus 380 ~~~~~~~~~~al~~~~~~~~~--~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-~~~~~~~ 456 (962)
... +||.+.|++.++.+... ....++..++.||++.++++++.+. +| ..+.||++|.+++.|... ...++++
T Consensus 340 ~~s-~hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~ 414 (675)
T TIGR01497 340 LAD-DTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDL 414 (675)
T ss_pred CCC-CCcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHH
Confidence 654 48999999987653211 1112345678999999877765443 45 578999999999988532 2334567
Q ss_pred HHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHH
Q 044543 457 HTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGR 536 (962)
Q Consensus 457 ~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~ 536 (962)
++.+++++++|.|++++|++. +++|+++++||+|||++++|++||++||+++|+|||+..+|.++|+
T Consensus 415 ~~~~~~~a~~G~r~l~va~~~-------------~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~ 481 (675)
T TIGR01497 415 DQAVDQVARQGGTPLVVCEDN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAA 481 (675)
T ss_pred HHHHHHHHhCCCeEEEEEECC-------------EEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Confidence 788899999999999999853 8999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeE
Q 044543 537 RLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGI 616 (962)
Q Consensus 537 ~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGI 616 (962)
++|+. +++||++|+||.++|+.+|++|+.|+|+|||+||+|||++|||||
T Consensus 482 ~lGI~------------------------------~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGi 531 (675)
T TIGR01497 482 EAGVD------------------------------DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGV 531 (675)
T ss_pred HcCCC------------------------------EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeE
Confidence 99984 369999999999999999999999999999999999999999999
Q ss_pred EccCchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 617 AVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLG 672 (962)
Q Consensus 617 amg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~ 672 (962)
||++|+++|+++||+++++++|++|++++++||+++-+......|.++.+++-.+.
T Consensus 532 Am~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~~~ 587 (675)
T TIGR01497 532 AMNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYFA 587 (675)
T ss_pred EeCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHHHH
Confidence 99999999999999999999999999999999999999999999998877754443
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-84 Score=770.61 Aligned_cols=504 Identities=27% Similarity=0.405 Sum_probs=439.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEE-CCeEEEEECcCcCCCcEEEEeCCCeeecceEEEec
Q 044543 106 WQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLR-DGAWREQEASILVPGDVISIKLGDIIPADARLLDG 184 (962)
Q Consensus 106 ~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~R-dg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g 184 (962)
|.++..+++++++...++.+...|+.+++++|.++.|.++++++ ||++++|+.++|+|||+|.|++||+||+||++++|
T Consensus 174 f~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G 253 (713)
T COG2217 174 FEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSG 253 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEeC
Confidence 36777788888888888888899999999999999999997776 56699999999999999999999999999999999
Q ss_pred CCeeEecccccCCCeeeecCCCCcccccceeecceEEEEEEEecchhHHHhHHHhhhcc-CCCChHHHHHHHHHHHHHHH
Q 044543 185 DPLKIDQSALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQEGHFQKVLTAIGNFCICS 263 (962)
Q Consensus 185 ~~~~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~ 263 (962)
+ ..||||+|||||.|+.|.+||.|++||.+.+|.....|+++|.+|.+++|.++++++ .++++.|+..+++..++++.
T Consensus 254 ~-s~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~ 332 (713)
T COG2217 254 S-SSVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPV 332 (713)
T ss_pred c-EEeecchhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHH
Confidence 5 589999999999999999999999999999999999999999999999999999988 48899999999999998876
Q ss_pred HHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCcccccCchHHhhcCceEEEecc
Q 044543 264 IAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 343 (962)
Q Consensus 264 i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DK 343 (962)
++++.++.++++++....+|..++..++++|+++|||+|.+++|++...+..+.+++|+++|+.+++|.++++|+++|||
T Consensus 333 vl~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDK 412 (713)
T COG2217 333 VLVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDK 412 (713)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeC
Confidence 65555555554444444678889999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCceEEEEEeeeecccCCChHHHHHHHHHhccccCCChHHHHHHHhhcChhhhhcCceEeeecCCCCCCceEEEE
Q 044543 344 TGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAIT 423 (962)
Q Consensus 344 TGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~ 423 (962)
|||||+|+|+|.+... +. + ++++++.+++..+..++ ||+..|+++++.+.. ....+..+.+|-.. ...
T Consensus 413 TGTLT~G~p~v~~v~~--~~-~-~e~~~L~laAalE~~S~-HPiA~AIv~~a~~~~--~~~~~~~~~i~G~G----v~~- 480 (713)
T COG2217 413 TGTLTEGKPEVTDVVA--LD-G-DEDELLALAAALEQHSE-HPLAKAIVKAAAERG--LPDVEDFEEIPGRG----VEA- 480 (713)
T ss_pred CCCCcCCceEEEEEec--CC-C-CHHHHHHHHHHHHhcCC-ChHHHHHHHHHHhcC--CCCccceeeeccCc----EEE-
Confidence 9999999999998662 22 3 78899999998877665 999999999765322 11112222333111 111
Q ss_pred EEcCCCCEEEEEeCcHHHHHHHhccchHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCCCC
Q 044543 424 YIDSDGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPR 503 (962)
Q Consensus 424 ~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr 503 (962)
..+| ..+..|++..+.+.-. +... ..+..+.+.++|..++.++... +++|+++++|++|
T Consensus 481 --~v~g--~~v~vG~~~~~~~~~~---~~~~-~~~~~~~~~~~G~t~v~va~dg-------------~~~g~i~~~D~~R 539 (713)
T COG2217 481 --EVDG--ERVLVGNARLLGEEGI---DLPL-LSERIEALESEGKTVVFVAVDG-------------KLVGVIALADELR 539 (713)
T ss_pred --EECC--EEEEEcCHHHHhhcCC---Cccc-hhhhHHHHHhcCCeEEEEEECC-------------EEEEEEEEeCCCC
Confidence 1255 6678899998654221 1111 4556778888999999999866 8999999999999
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHH
Q 044543 504 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKY 583 (962)
Q Consensus 504 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~ 583 (962)
+|++++|++||+.|+++.|+||||..+|.++|+++||. +++|.+.||||.
T Consensus 540 ~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId------------------------------~v~AellPedK~ 589 (713)
T COG2217 540 PDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID------------------------------EVRAELLPEDKA 589 (713)
T ss_pred hhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH------------------------------hheccCCcHHHH
Confidence 99999999999999999999999999999999999984 369999999999
Q ss_pred HHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 584 EIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAV 663 (962)
Q Consensus 584 ~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~ 663 (962)
++|+.||++|++|+|+|||+||+|||++||||||||+|+|+|+++||++|++++++.++.+++.+|+++++||+|+.|++
T Consensus 590 ~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~ 669 (713)
T COG2217 590 EIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAF 669 (713)
T ss_pred HHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 044543 664 SITIRIVLGF 673 (962)
Q Consensus 664 ~~ni~~~l~~ 673 (962)
.+|...+...
T Consensus 670 ~yn~~~iplA 679 (713)
T COG2217 670 GYNAIAIPLA 679 (713)
T ss_pred HHHHHHHHHH
Confidence 9998655433
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-81 Score=696.35 Aligned_cols=762 Identities=20% Similarity=0.257 Sum_probs=539.8
Q ss_pred HHHhhcCCCccCccccchH----HHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Q 044543 53 KRLVIFGPNKLEEKKESKV----LKFLGFMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEEN 128 (962)
Q Consensus 53 ~r~~~~G~N~i~~~~~~~~----~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~e~ 128 (962)
.++++|.+|.+...||+++ ..+++||...+++++++.++-+++.....+... ....++.+++++..+.+.+++.
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~--ty~~pl~fvl~itl~keavdd~ 151 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLS--TYWGPLGFVLTITLIKEAVDDL 151 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchh--hhhHHHHHHHHHHHHHHHHHHH
Confidence 5677899999999998753 567889999999999998888887433332222 2233455666677777888888
Q ss_pred hhhhHHHHhhcCCCCeEEEE-ECCeEEEEECcCcCCCcEEEEeCCCeeecceEEEecC----CeeEecccccCCCeeeec
Q 044543 129 NAGNAAAALMAGLAPQTKVL-RDGAWREQEASILVPGDVISIKLGDIIPADARLLDGD----PLKIDQSALTGESLPVTK 203 (962)
Q Consensus 129 ~~~~~~~~l~~~~~~~~~V~-Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~----~~~Vdes~LTGEs~pv~K 203 (962)
++.+.+..+++ .+.+++ |||-..+ +++++++||+|.+..+++||||.++++++ +|.|-+-.|+||+.-+.|
T Consensus 152 ~r~~rd~~~Ns---e~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKLr 227 (1051)
T KOG0210|consen 152 KRRRRDRELNS---EKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKLR 227 (1051)
T ss_pred HHHHhhhhhhh---hhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCcccceee
Confidence 77777665543 444444 6765544 99999999999999999999999999754 489999999999977766
Q ss_pred CC-----------------------------------------------CCcccccceeecceEEEEEEEecchhHHHhH
Q 044543 204 MP-----------------------------------------------GDEVFSGSTCKQGEIEAVVIATGVHTFFGKA 236 (962)
Q Consensus 204 ~~-----------------------------------------------g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki 236 (962)
-| .|.++++|.+.+|.++|+|++||.+|+
T Consensus 228 l~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtR---- 303 (1051)
T KOG0210|consen 228 LPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTR---- 303 (1051)
T ss_pred ccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHH----
Confidence 54 367999999999999999999999995
Q ss_pred HHhhhcc---CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHH
Q 044543 237 AHLVDST---NQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIG 313 (962)
Q Consensus 237 ~~l~~~~---~~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~ 313 (962)
..++.+ .+.+.++..+|.+.+++.+.+++..++ ++.....+..|...+.+++.++...||++|-+.+.+++.+-
T Consensus 304 -svMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~v--mv~~~g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~y 380 (1051)
T KOG0210|consen 304 -SVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIV--MVAMKGFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIVY 380 (1051)
T ss_pred -HHhccCCcccccceeeeecccHHHHHHHHHHHHHHH--HHHhhcCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhhH
Confidence 233333 366778888888888766555443322 33333456788888999999999999999999999999999
Q ss_pred HHHHhcC----CcccccCchHHhhcCceEEEecccccccCCceEEEEEeeeecccCCCh---------------------
Q 044543 314 SHRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDK--------------------- 368 (962)
Q Consensus 314 ~~~l~~~----~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~--------------------- 368 (962)
+.....+ |.++|+.+.-|+||+++++.+|||||||+|+|.+++++......+.+.
T Consensus 381 s~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~ 460 (1051)
T KOG0210|consen 381 SWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKG 460 (1051)
T ss_pred hhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccc
Confidence 8888765 578999999999999999999999999999999999876422211000
Q ss_pred -------------HHHHHHHHHhcccc------------CCChHHHHHHHhhc-----------------ChhhhhcCce
Q 044543 369 -------------DTVILYGARASRVE------------NQDAIDACIVGMLG-----------------DAKEARAGIT 406 (962)
Q Consensus 369 -------------~~~l~~a~~~~~~~------------~~~~~~~al~~~~~-----------------~~~~~~~~~~ 406 (962)
.+.....+.|+... ..+|+|.|+++... .+......|+
T Consensus 461 ~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yq 540 (1051)
T KOG0210|consen 461 ALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQ 540 (1051)
T ss_pred cchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEE
Confidence 12233334444321 13677777765321 1222345799
Q ss_pred EeeecCCCCCCceEEEEEEcC-CCCEEEEEeCcHHHHHHHhccchHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCC--
Q 044543 407 ELHFLPFNPVEKRTAITYIDS-DGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTK-- 483 (962)
Q Consensus 407 ~l~~~pF~s~~kr~sv~~~~~-~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~-- 483 (962)
+++.+||+|+.|||.++++++ .|++..|.|||+.++-.....+ +.+++.-..||++|+|+|.+|.|.++++++
T Consensus 541 IL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~N----dWleEE~gNMAREGLRtLVvakK~Ls~~eye~ 616 (1051)
T KOG0210|consen 541 ILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQYN----DWLEEECGNMAREGLRTLVVAKKVLSEEEYEA 616 (1051)
T ss_pred EEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccccc----hhhhhhhhhhhhhcceEEEEEecccCHHHHHH
Confidence 999999999999999999986 6899999999999987766543 455666778999999999999999988752
Q ss_pred ------------------------CCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhC
Q 044543 484 ------------------------ESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLG 539 (962)
Q Consensus 484 ------------------------~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~G 539 (962)
..+|.+|+++|+++.||++|+|++.+++-||+|||||||+|||+.+||+.||++.+
T Consensus 617 Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~ 696 (1051)
T KOG0210|consen 617 FEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSR 696 (1051)
T ss_pred HHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhcc
Confidence 14689999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccc-----ccchh------------ccCCcc-----------hHHHHhh--hcceEEecCHhhHHHHHHHH
Q 044543 540 MGTNMYPSSALL-----GQIKD------------ANISAL-----------PVDELIE--KADGFAGVFPEHKYEIVRKL 589 (962)
Q Consensus 540 i~~~~~~~~~l~-----~~~~~------------~~~~~~-----------~~~~~~~--~~~v~arvsP~qK~~iV~~l 589 (962)
+.+......++. |+... -.++++ ++-++.. .+.||||++|+||+++++.+
T Consensus 697 L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~ll 776 (1051)
T KOG0210|consen 697 LFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLL 776 (1051)
T ss_pred ceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHH
Confidence 976432221110 00000 012232 2233332 35699999999999999999
Q ss_pred hhC-CCEEEEEcCCcCChhhhhcCCeeEEc-c-CchHHHHhcccccccCCCchHHHHHH-HHHHHHHHHHHHHHHHHHHH
Q 044543 590 QER-KHICGMTGDGVNDAPALKKADIGIAV-A-DATDAARGASDIVLTEPGLSVIVSAV-LTSRAIFQRMKNYTIYAVSI 665 (962)
Q Consensus 590 q~~-g~~v~miGDG~ND~~aLk~AdVGIam-g-~gt~~a~~aaDivl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~~~~ 665 (962)
|++ |..|+++|||.||+.|+++||+||++ | +|.||.- |||+.+++ |+.+-+++ -|||.+|+|-.+..+|.+-.
T Consensus 777 q~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASL-AADfSItq--F~Hv~rLLl~HGR~SYkrsa~laqfViHR 853 (1051)
T KOG0210|consen 777 QKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASL-AADFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQFVIHR 853 (1051)
T ss_pred HHhhCceEEEEcCCCccchheeecccceeeecccccccch-hccccHHH--HHHHHHHhhccccchHHHHHHHHHHHHhh
Confidence 985 89999999999999999999999999 6 7777666 99999955 88888776 55999999999988886544
Q ss_pred HHHHHHHHHHHHHhh---cC-CchHH-HHHHHHHHhhhchhccccCCCCCCC----CC---------CccchHHHHHHHH
Q 044543 666 TIRIVLGFLLIALIW---KF-DFSPF-MVLIIAILNDGTIMTISKDRVKPSP----VP---------DTWKLKEIFATGI 727 (962)
Q Consensus 666 ni~~~l~~~~~~~~~---~~-~~~p~-~il~i~l~~~~~~~~l~~d~~~~~~----~~---------~~~~~~~~~~~~~ 727 (962)
...+..+..+++..+ +. .+.-+ ++.+..+.+-.|..++-.|+...+. .| +....+.++.| +
T Consensus 854 GL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iw-v 932 (1051)
T KOG0210|consen 854 GLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIW-V 932 (1051)
T ss_pred hHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhhhhhh-h
Confidence 332222222221111 10 12222 2333333333455777777643221 12 22233444444 5
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccccccccccCCChhHHHHHHHHHHHHHHHHH-HhhhccCCCCcccchhHHHHHHHHH
Q 044543 728 VLGTYLAVMTVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQAL-IFVTRSRSWSFLERPGLLLIAAFII 806 (962)
Q Consensus 728 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~l~~~~~~ 806 (962)
++++|+..+.+.+++..+.+.|. ...++.|..+.+....+ ++.+++|.| .++.+-++
T Consensus 933 LISiYQG~vim~g~~~l~~~ef~--------------~ivaisFtaLi~tELiMVaLtv~tw~~--------~m~vae~l 990 (1051)
T KOG0210|consen 933 LISIYQGSVIMYGALLLFDTEFI--------------HIVAISFTALILTELIMVALTVRTWHW--------LMVVAELL 990 (1051)
T ss_pred hHHHHcccHHHHHHHHHhhhhhe--------------EeeeeeeHHHHHHHHHHHhhhhhhhhH--------HHHHHHHH
Confidence 55888888777655555443321 12345566666666544 566666554 33333333
Q ss_pred HHHHHH--HHH--HhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCch
Q 044543 807 AQLVAT--LIA--VYANFGFARIHGIGWGWVGVIWLYSIVFYIPLDVLKFIVRYALTGK 861 (962)
Q Consensus 807 ~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~ 861 (962)
++.+.. +.. -|....| -.+|.+++-+.++.++..+|..+.|++.|++-||.
T Consensus 991 sL~~Yivsl~~l~~yfd~~f----~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpS 1045 (1051)
T KOG0210|consen 991 SLALYIVSLAFLHEYFDRYF----ILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPS 1045 (1051)
T ss_pred HHHHHHHHHHHHHhHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcc
Confidence 332211 111 1111111 12455555556777788889999999988887764
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-79 Score=749.89 Aligned_cols=499 Identities=26% Similarity=0.366 Sum_probs=438.2
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCeeecceEEEec
Q 044543 105 DWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDG 184 (962)
Q Consensus 105 ~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g 184 (962)
.|.+++.++++++++..++.++++|+++.+++|++..+++++|+|||++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g 284 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSP 284 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEEC
Confidence 68888889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEecccccCCCeeeecCCCCcccccceeecceEEEEEEEecchhHHHhHHHhhhcc-CCCChHHHHHHHHHHHHHHH
Q 044543 185 DPLKIDQSALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQEGHFQKVLTAIGNFCICS 263 (962)
Q Consensus 185 ~~~~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~ 263 (962)
...||||+|||||.|+.|.+||.||+||.+.+|.++++|+++|.+|.+||+.++++++ .+++++|+.+++++.++...
T Consensus 285 -~~~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~ 363 (741)
T PRK11033 285 -FASFDESALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPA 363 (741)
T ss_pred -cEEeecccccCCCCCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999887 47899999999999988776
Q ss_pred HHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCcccccCchHHhhcCceEEEecc
Q 044543 264 IAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 343 (962)
Q Consensus 264 i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DK 343 (962)
++++.++.+++++.+.+.+|..++..++++++++|||+|.++.|++...+..+++|+|+++|+.+++|.|+++|++||||
T Consensus 364 v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDK 443 (741)
T PRK11033 364 IMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDK 443 (741)
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeC
Confidence 66655555555444456678888999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCceEEEEEeeeecccCCChHHHHHHHHHhccccCCChHHHHHHHhhcChhhhhcCceEeeecCCCCCCceEEEE
Q 044543 344 TGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAIT 423 (962)
Q Consensus 344 TGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~ 423 (962)
|||||+|+|+|.+... ..+.++++++.+++..+.. ..||++.|+++++.+. +. .+||.+..+.+.-.
T Consensus 444 TGTLT~g~~~v~~~~~---~~~~~~~~~l~~aa~~e~~-s~hPia~Ai~~~a~~~-----~~----~~~~~~~~~~~~g~ 510 (741)
T PRK11033 444 TGTLTEGKPQVTDIHP---ATGISESELLALAAAVEQG-STHPLAQAIVREAQVR-----GL----AIPEAESQRALAGS 510 (741)
T ss_pred CCCCcCCceEEEEEEe---cCCCCHHHHHHHHHHHhcC-CCCHHHHHHHHHHHhc-----CC----CCCCCcceEEEeeE
Confidence 9999999999988652 2346677888887766543 4599999999876421 11 24666666655321
Q ss_pred -EE-cCCCCEEEEEeCcHHHHHHHhccchHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCC
Q 044543 424 -YI-DSDGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDP 501 (962)
Q Consensus 424 -~~-~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~ 501 (962)
++ ..+|+ .+..|+++.+.+ ..+...+.++++..+|.|+++++++. +++|+++++|+
T Consensus 511 Gv~~~~~g~--~~~ig~~~~~~~-------~~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~i~l~d~ 568 (741)
T PRK11033 511 GIEGQVNGE--RVLICAPGKLPP-------LADAFAGQINELESAGKTVVLVLRND-------------DVLGLIALQDT 568 (741)
T ss_pred EEEEEECCE--EEEEecchhhhh-------ccHHHHHHHHHHHhCCCEEEEEEECC-------------EEEEEEEEecC
Confidence 11 23554 345689988754 11234455678899999999999854 89999999999
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhh
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEH 581 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~q 581 (962)
+|+|++++|++|+++|++++|+|||+..+|.++|+++||. .+++++|+|
T Consensus 569 ~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~ 617 (741)
T PRK11033 569 LRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID-------------------------------FRAGLLPED 617 (741)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-------------------------------eecCCCHHH
Confidence 9999999999999999999999999999999999999983 267789999
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 044543 582 KYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIY 661 (962)
Q Consensus 582 K~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~ 661 (962)
|.++|+.+|+. +.|+|+|||+||+|||++|||||+||+|+++++++||++++++++..++.++.+||++++||++|+.|
T Consensus 618 K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~ 696 (741)
T PRK11033 618 KVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITI 696 (741)
T ss_pred HHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999965 58999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 044543 662 AVSITIRIVL 671 (962)
Q Consensus 662 ~~~~ni~~~l 671 (962)
++.+|+..+.
T Consensus 697 a~~~n~~~i~ 706 (741)
T PRK11033 697 ALGLKAIFLV 706 (741)
T ss_pred HHHHHHHHHH
Confidence 9999975443
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-80 Score=715.81 Aligned_cols=538 Identities=23% Similarity=0.332 Sum_probs=458.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCe-EEEEECcCcCCCcEEEEeCCCeeecceEEEec
Q 044543 106 WQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGA-WREQEASILVPGDVISIKLGDIIPADARLLDG 184 (962)
Q Consensus 106 ~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~-~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g 184 (962)
|.+..+++.++.+...++.....++..++..|+++.|.++.++.+|+ .++|+.+.|++||+|.|++|++||+||++++|
T Consensus 341 Fdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~G 420 (951)
T KOG0207|consen 341 FDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDG 420 (951)
T ss_pred ccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEeC
Confidence 33445556667777888888888888999999999999999999997 89999999999999999999999999999999
Q ss_pred CCeeEecccccCCCeeeecCCCCcccccceeecceEEEEEEEecchhHHHhHHHhhhccC-CCChHHHHHHHHHHHHHHH
Q 044543 185 DPLKIDQSALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QEGHFQKVLTAIGNFCICS 263 (962)
Q Consensus 185 ~~~~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~-~~~~l~~~~~~i~~~~~~~ 263 (962)
+++||||.+|||++||.|++|+.|.+||.+.+|.....++++|.||.+++|.+++++++ .+.|.|+.+|+++.++...
T Consensus 421 -ss~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~ 499 (951)
T KOG0207|consen 421 -SSEVDESLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPV 499 (951)
T ss_pred -ceeechhhccCCceecccCCCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCch
Confidence 57999999999999999999999999999999999999999999999999999999985 8899999999999998777
Q ss_pred HHHHHHHHHHHHhhccc----------cchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCcccccCchHHhh
Q 044543 264 IAIGMVIEIIVMYPIQH----------RAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEM 333 (962)
Q Consensus 264 i~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~L 333 (962)
+++..++.+++|.++.. ..+..++..++++++++|||+|.++.|++.+.|....+++|+++|..+++|.+
T Consensus 500 Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~ 579 (951)
T KOG0207|consen 500 VIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKA 579 (951)
T ss_pred hhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHH
Confidence 76655555555444322 34566788889999999999999999999999999999999999999999999
Q ss_pred cCceEEEecccccccCCceEEEEEeeeecccCCChHHHHHHHHHhccccCCChHHHHHHHhhcChhhhhcCceEeeecCC
Q 044543 334 AGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPF 413 (962)
Q Consensus 334 g~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pF 413 (962)
.++++++||||||||+|+++|.+..+ .....+..+++.+.+..+.. ..||+..|++.++............+++..|
T Consensus 580 hkv~tVvFDKTGTLT~G~~~V~~~~~--~~~~~~~~e~l~~v~a~Es~-SeHPig~AIv~yak~~~~~~~~~~~~~~~~~ 656 (951)
T KOG0207|consen 580 HKVKTVVFDKTGTLTEGKPTVVDFKS--LSNPISLKEALALVAAMESG-SEHPIGKAIVDYAKEKLVEPNPEGVLSFEYF 656 (951)
T ss_pred hcCCEEEEcCCCceecceEEEEEEEe--cCCcccHHHHHHHHHHHhcC-CcCchHHHHHHHHHhcccccCccccceeecc
Confidence 99999999999999999999998764 33336677777776665544 4599999999998754422222223333334
Q ss_pred CCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhccchHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEE
Q 044543 414 NPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFV 493 (962)
Q Consensus 414 ~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~ll 493 (962)
....+...+. .+|+. ++-|.-+.+...- ....+.+...+++-...|..+.+++... +++
T Consensus 657 pg~g~~~~~~---~~~~~--i~iGN~~~~~r~~---~~~~~~i~~~~~~~e~~g~tvv~v~vn~-------------~l~ 715 (951)
T KOG0207|consen 657 PGEGIYVTVT---VDGNE--VLIGNKEWMSRNG---CSIPDDILDALTESERKGQTVVYVAVNG-------------QLV 715 (951)
T ss_pred cCCCcccceE---EeeeE--EeechHHHHHhcC---CCCchhHHHhhhhHhhcCceEEEEEECC-------------EEE
Confidence 3333221221 23433 7889988865532 2334457777888889999999999987 999
Q ss_pred EEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcce
Q 044543 494 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADG 573 (962)
Q Consensus 494 G~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v 573 (962)
|++.++|++|+|+..+|+.||+.||++.|+||||..+|.++|+++|+. +|
T Consensus 716 gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~------------------------------~V 765 (951)
T KOG0207|consen 716 GVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID------------------------------NV 765 (951)
T ss_pred EEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc------------------------------eE
Confidence 999999999999999999999999999999999999999999999963 47
Q ss_pred EEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHHHHHHHHH
Q 044543 574 FAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQ 653 (962)
Q Consensus 574 ~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~ 653 (962)
+|.+.|+||.++|+.+|++++.|+|+|||+||+|||.+|||||+||.|+++|.++||+||+.+++..++.+++.+|+++.
T Consensus 766 ~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~ 845 (951)
T KOG0207|consen 766 YAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVK 845 (951)
T ss_pred EeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHhhh
Q 044543 654 RMKNYTIYAVSITIRIVLGFLLIALIWKFDFSPFMVLIIAILNDG 698 (962)
Q Consensus 654 ~i~~~i~~~~~~ni~~~l~~~~~~~~~~~~~~p~~il~i~l~~~~ 698 (962)
|+|.|+.|++.+|+..++...+.++.+++.++||+--..-.+++.
T Consensus 846 rIk~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw~A~lama~SSv 890 (951)
T KOG0207|consen 846 RIKLNFVWALIYNLVGIPIAAGVFAPFGIVLPPWMASLAMAASSV 890 (951)
T ss_pred hHHHHHHHHHHHHHhhhhhheecccCCccccCchHHHHHHHhhhH
Confidence 999999999999998777777777777788999876655555544
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-77 Score=711.50 Aligned_cols=475 Identities=36% Similarity=0.534 Sum_probs=417.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHhhc--CCCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCeeecceEEEecCCeeEe
Q 044543 113 VVLLLINSTISFIEENNAGNAAAALMA--GLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKID 190 (962)
Q Consensus 113 ~~~~~i~~~i~~~~e~~~~~~~~~l~~--~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~~~Vd 190 (962)
+++++++.+++.+++++++++.+.+++ ..+++++|+|+| +++|++++|+|||+|.+++||+|||||+|++| .+.||
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g-~~~vd 80 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSG-SCFVD 80 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEc-cEEEE
Confidence 345678888999999999999999998 788899999999 99999999999999999999999999999999 68999
Q ss_pred cccccCCCeeeecCCCCcccccceeecceEEEEEEEecchhHHHhHHHhhhccC-CCChHHHHHHHHH-HHHHHHHHHHH
Q 044543 191 QSALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QEGHFQKVLTAIG-NFCICSIAIGM 268 (962)
Q Consensus 191 es~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~-~~~~l~~~~~~i~-~~~~~~i~~~~ 268 (962)
||+|||||.|+.|.+|+.+++||.+.+|.+.+.|+.+|.+|..+++..++.+.. .++++++..+++. .++++++++++
T Consensus 81 es~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la 160 (499)
T TIGR01494 81 ESNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIA 160 (499)
T ss_pred cccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998764 4788899999988 55544443333
Q ss_pred HHHHHHHhhcccc--chHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCcccccCchHHhhcCceEEEeccccc
Q 044543 269 VIEIIVMYPIQHR--AYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGT 346 (962)
Q Consensus 269 ~~~~~~~~~~~~~--~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGT 346 (962)
++.+++++..... +|..++..++++++++|||+||+++++++..+..+++++|+++|+++++|+||++|++|||||||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGT 240 (499)
T TIGR01494 161 LAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGT 240 (499)
T ss_pred HHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCc
Confidence 3333322222112 37788999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCceEEEEEeeeecccCCChHHHHHHHHHhccccCCChHHHHHHHhhcChhhhhcCceEeeecCCCCCCceEEEEEEc
Q 044543 347 LTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYID 426 (962)
Q Consensus 347 LT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~ 426 (962)
||+|+|+|.++.+. . . ....+||++.|+++++.. +.++..||++.+++|++++..
T Consensus 241 LT~~~~~v~~~~~~--~-~--------------~~~s~hp~~~ai~~~~~~--------~~~~~~~f~~~~~~~~~~~~~ 295 (499)
T TIGR01494 241 LTKNEMSFKKVSVL--G-G--------------EYLSGHPDERALVKSAKW--------KILNVFEFSSVRKRMSVIVRG 295 (499)
T ss_pred cccCceEEEEEEec--C-C--------------CcCCCChHHHHHHHHhhh--------cCcceeccCCCCceEEEEEec
Confidence 99999999987631 1 0 123459999999988753 123567999999999998875
Q ss_pred CCCCEEEEEeCcHHHHHHHhccchHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCCCCccH
Q 044543 427 SDGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPRHDS 506 (962)
Q Consensus 427 ~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~ 506 (962)
.++ .++||+++.+.+.|.. ..+.+++++.+|+|++++|++. +++|++.++|++|+|+
T Consensus 296 ~~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~~g~i~l~d~lr~~~ 352 (499)
T TIGR01494 296 PDG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TLLGLLGLEDPLRDDA 352 (499)
T ss_pred CCc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eEEEEEEecCCCchhH
Confidence 333 4789999999998752 2334556888999999999876 8999999999999999
Q ss_pred HHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHH
Q 044543 507 AETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIV 586 (962)
Q Consensus 507 ~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV 586 (962)
+++|+.|+++|++++|+|||++.+|..+|+++|+ +|+++|+||.++|
T Consensus 353 ~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi---------------------------------~~~~~p~~K~~~v 399 (499)
T TIGR01494 353 KETISELREAGIRVIMLTGDNVLTAKAIAKELGI---------------------------------FARVTPEEKAALV 399 (499)
T ss_pred HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---------------------------------eeccCHHHHHHHH
Confidence 9999999999999999999999999999999985 6899999999999
Q ss_pred HHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 587 RKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSIT 666 (962)
Q Consensus 587 ~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~n 666 (962)
+.+|+.|+.|+|+|||+||+|||++|||||+|+ |+++||++|+++++..++.++.+||++++++++++.|++++|
T Consensus 400 ~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n 474 (499)
T TIGR01494 400 EALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYN 474 (499)
T ss_pred HHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999997 688999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 044543 667 IRIVLGFLL 675 (962)
Q Consensus 667 i~~~l~~~~ 675 (962)
+..++..++
T Consensus 475 ~~~~~~a~~ 483 (499)
T TIGR01494 475 LILIPLAAL 483 (499)
T ss_pred HHHHHHHHH
Confidence 875554443
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-75 Score=695.77 Aligned_cols=516 Identities=27% Similarity=0.406 Sum_probs=436.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECC-eEEEEECcCcCC
Q 044543 85 VMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDG-AWREQEASILVP 163 (962)
Q Consensus 85 ~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg-~~~~i~~~~Lv~ 163 (962)
.+.++++++++++ .|.++..|+++++++..++.++++++++.+++|.+..+++++|+||| +++++++++|+|
T Consensus 4 l~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~ 76 (556)
T TIGR01525 4 LMALATIAAYAMG-------LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQV 76 (556)
T ss_pred HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCC
Confidence 3455666677665 78899999999999999999999999999999999999999999996 999999999999
Q ss_pred CcEEEEeCCCeeecceEEEecCCeeEecccccCCCeeeecCCCCcccccceeecceEEEEEEEecchhHHHhHHHhhhcc
Q 044543 164 GDVISIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 243 (962)
Q Consensus 164 GDiI~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~ 243 (962)
||+|.+++||+|||||+|++|+ +.||||+|||||.|+.|++|+.+|+||.+.+|+++++|++||.+|++|++.++++++
T Consensus 77 GDiv~v~~G~~iP~Dg~vi~g~-~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~ 155 (556)
T TIGR01525 77 GDIVIVRPGERIPVDGVVISGE-SEVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEA 155 (556)
T ss_pred CCEEEECCCCEeccceEEEecc-eEEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHH
Confidence 9999999999999999999995 799999999999999999999999999999999999999999999999999999776
Q ss_pred -CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCc
Q 044543 244 -NQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 322 (962)
Q Consensus 244 -~~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~i 322 (962)
.+++++|+.+++++.+++..++++.++.+++++.. ... .++..++++++++|||+||++++++++.+..+++++|+
T Consensus 156 ~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~-~~~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gi 232 (556)
T TIGR01525 156 QSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLAL-GAL--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGI 232 (556)
T ss_pred hhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccc--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCc
Confidence 47889999999999887665555444444443322 222 78889999999999999999999999999999999999
Q ss_pred ccccCchHHhhcCceEEEecccccccCCceEEEEEeeeecccCCC--hHHHHHHHHHhccccCCChHHHHHHHhhcChhh
Q 044543 323 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMD--KDTVILYGARASRVENQDAIDACIVGMLGDAKE 400 (962)
Q Consensus 323 lvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~--~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~ 400 (962)
++|+++++|.||++|++|||||||||+|+|+|.+... . .+.+ +++++.+++.++.. ..||++.|+++++.....
T Consensus 233 lvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~--~-~~~~~~~~~~l~~a~~~e~~-~~hp~~~Ai~~~~~~~~~ 308 (556)
T TIGR01525 233 LIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEP--L-DDASISEEELLALAAALEQS-SSHPLARAIVRYAKKRGL 308 (556)
T ss_pred eecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEe--c-CCCCccHHHHHHHHHHHhcc-CCChHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999988653 2 2233 66777777766554 459999999988753211
Q ss_pred hhcCce-EeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhccchHHHHHHHHHHHHHHhcCCeEEEEEeecCC
Q 044543 401 ARAGIT-ELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVP 479 (962)
Q Consensus 401 ~~~~~~-~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~ 479 (962)
.... + ....+| .+.....+ +|. ..+..|+++.+ +... .+ ....++.++.++.+|+|+++++...
T Consensus 309 ~~~~-~~~~~~~~----~~gi~~~~---~g~-~~~~lg~~~~~-~~~~--~~-~~~~~~~~~~~~~~g~~~~~v~~~~-- 373 (556)
T TIGR01525 309 ELPK-QEDVEEVP----GKGVEATV---DGQ-EEVRIGNPRLL-ELAA--EP-ISASPDLLNEGESQGKTVVFVAVDG-- 373 (556)
T ss_pred Cccc-ccCeeEec----CCeEEEEE---CCe-eEEEEecHHHH-hhcC--CC-chhhHHHHHHHhhCCcEEEEEEECC--
Confidence 0000 1 111111 11222221 342 35667888876 2111 11 1223455677889999999999754
Q ss_pred CCCCCCCCCCceEEEEeecCCCCCccHHHHHHHHHhCC-CcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhcc
Q 044543 480 EKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLG-VNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDAN 558 (962)
Q Consensus 480 ~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aG-I~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~ 558 (962)
+++|.+.++|++|||++++|++|+++| ++++|+|||+..++.++++++|+.
T Consensus 374 -----------~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~----------------- 425 (556)
T TIGR01525 374 -----------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID----------------- 425 (556)
T ss_pred -----------EEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC-----------------
Confidence 899999999999999999999999999 999999999999999999999983
Q ss_pred CCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCc
Q 044543 559 ISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGL 638 (962)
Q Consensus 559 ~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~ 638 (962)
.+|+++.|++|.++++.+++.++.|+|+|||.||+||+++|||||++|++++.++++||+++.++++
T Consensus 426 -------------~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~ 492 (556)
T TIGR01525 426 -------------EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDL 492 (556)
T ss_pred -------------eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCH
Confidence 2589999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 639 SVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVL 671 (962)
Q Consensus 639 ~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l 671 (962)
+.+..++++||++++|+++++.|++.+|+..+.
T Consensus 493 ~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~ 525 (556)
T TIGR01525 493 SSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIP 525 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999986553
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-75 Score=694.48 Aligned_cols=498 Identities=29% Similarity=0.425 Sum_probs=428.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCC
Q 044543 85 VMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPG 164 (962)
Q Consensus 85 ~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~G 164 (962)
++.++++++++++ +|.++..|+++++++..++.++++|+.+.+++|++..+++++|+|||+++++++++|+||
T Consensus 4 l~~~a~~~~~~~~-------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~G 76 (536)
T TIGR01512 4 LMALAALGAVAIG-------EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVG 76 (536)
T ss_pred HHHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCC
Confidence 4566777777765 799999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeCCCeeecceEEEecCCeeEecccccCCCeeeecCCCCcccccceeecceEEEEEEEecchhHHHhHHHhhhcc-
Q 044543 165 DVISIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST- 243 (962)
Q Consensus 165 DiI~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~- 243 (962)
|+|.+++||+|||||+|++| .+.||||+|||||.|+.|++|+.+|+||.+.+|+++++|++||.+|.+||+.+++++.
T Consensus 77 Div~v~~G~~iP~Dg~ii~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~ 155 (536)
T TIGR01512 77 DVVVVKPGERVPVDGVVLSG-TSTVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQ 155 (536)
T ss_pred CEEEEcCCCEeecceEEEeC-cEEEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHh
Confidence 99999999999999999999 5799999999999999999999999999999999999999999999999999999876
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCcc
Q 044543 244 NQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 323 (962)
Q Consensus 244 ~~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~il 323 (962)
.+++++|+.+++++.+++..++++.++.+++++.... +..++..++++++++|||+||+++++++..+..+++++|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gil 233 (536)
T TIGR01512 156 SRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKR--WPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGIL 233 (536)
T ss_pred hCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeE
Confidence 4788999999999988776665545544444443222 23378889999999999999999999999999999999999
Q ss_pred cccCchHHhhcCceEEEecccccccCCceEEEEEeeeecccCCChHHHHHHHHHhccccCCChHHHHHHHhhcChhhhhc
Q 044543 324 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVENQDAIDACIVGMLGDAKEARA 403 (962)
Q Consensus 324 vk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~ 403 (962)
+|+++++|++|+++++|||||||||+|+|++.+... .+++.+++..+. ...||++.|+++++.+.+
T Consensus 234 ik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~---------~~~l~~a~~~e~-~~~hp~~~Ai~~~~~~~~---- 299 (536)
T TIGR01512 234 IKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVP---------AEVLRLAAAAEQ-ASSHPLARAIVDYARKRE---- 299 (536)
T ss_pred EcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeH---------HHHHHHHHHHhc-cCCCcHHHHHHHHHHhcC----
Confidence 999999999999999999999999999999987542 256777765544 445999999998875321
Q ss_pred CceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhccchHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCC
Q 044543 404 GITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTK 483 (962)
Q Consensus 404 ~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~ 483 (962)
.+...+.+|. +.... ..+|+ .+..|+++.+.+.. .+.+..+|.+++.++...
T Consensus 300 ~~~~~~~~~g----~gi~~---~~~g~--~~~ig~~~~~~~~~-------------~~~~~~~~~~~~~v~~~~------ 351 (536)
T TIGR01512 300 NVESVEEVPG----EGVRA---VVDGG--EVRIGNPRSLEAAV-------------GARPESAGKTIVHVARDG------ 351 (536)
T ss_pred CCcceEEecC----CeEEE---EECCe--EEEEcCHHHHhhcC-------------CcchhhCCCeEEEEEECC------
Confidence 1222222221 11111 12453 34578887653311 014566788888887543
Q ss_pred CCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCC-cEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcc
Q 044543 484 ESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGV-NVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISAL 562 (962)
Q Consensus 484 ~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI-~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~ 562 (962)
+++|.+.++|++|||++++|++|+++|+ +++|+|||+..+|..+++++|+.
T Consensus 352 -------~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~--------------------- 403 (536)
T TIGR01512 352 -------TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID--------------------- 403 (536)
T ss_pred -------EEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh---------------------
Confidence 8999999999999999999999999999 99999999999999999999984
Q ss_pred hHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEcc-CchHHHHhcccccccCCCchHH
Q 044543 563 PVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVI 641 (962)
Q Consensus 563 ~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg-~gt~~a~~aaDivl~~~~~~~i 641 (962)
.+|+++.|++|.++++.++++++.|+|+|||.||+||+++||+||++| ++++.++++||+++.+++++.+
T Consensus 404 ---------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l 474 (536)
T TIGR01512 404 ---------EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRL 474 (536)
T ss_pred ---------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHH
Confidence 248889999999999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 642 VSAVLTSRAIFQRMKNYTIYAVSITIRIVL 671 (962)
Q Consensus 642 ~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l 671 (962)
.+++.+||++++++++++.|++.+|+..+.
T Consensus 475 ~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~ 504 (536)
T TIGR01512 475 PQAIRLARRTRRIVKQNVVIALGIILLLIL 504 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999975443
|
. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-75 Score=691.04 Aligned_cols=506 Identities=26% Similarity=0.408 Sum_probs=425.1
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEEC-CeEEEEECcCcCCCcEEEEeCCCeeecceEEEe
Q 044543 105 DWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRD-GAWREQEASILVPGDVISIKLGDIIPADARLLD 183 (962)
Q Consensus 105 ~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rd-g~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~ 183 (962)
+|.....++++++++..++.+.++|+++++++|++..+.+++++|+ |++++|++++|+|||+|.|++||+|||||+|++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 4455555677777778888888889999999999999999999985 677999999999999999999999999999999
Q ss_pred cCCeeEecccccCCCeeeecCCCCcccccceeecceEEEEEEEecchhHHHhHHHhhhcc-CCCChHHHHHHHHHHHHHH
Q 044543 184 GDPLKIDQSALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQEGHFQKVLTAIGNFCIC 262 (962)
Q Consensus 184 g~~~~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~ 262 (962)
|+ +.||||+|||||.|+.|++||.+|+||.+.+|.++++|+++|.+|.+||+.++++++ .+++++|+..++++.+++.
T Consensus 133 g~-~~vdes~lTGEs~pv~k~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~ 211 (562)
T TIGR01511 133 GE-SEVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVP 211 (562)
T ss_pred Cc-eEEehHhhcCCCCcEEcCCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 94 799999999999999999999999999999999999999999999999999999876 4789999999999988766
Q ss_pred HHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCcccccCchHHhhcCceEEEec
Q 044543 263 SIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 342 (962)
Q Consensus 263 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~D 342 (962)
.++++.++.++ .| ..++..++++++++|||+|++++|+++..+..+++++|+++|+++++|.|+++|++|||
T Consensus 212 ~v~~~a~~~~~-~~-------~~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fD 283 (562)
T TIGR01511 212 VVIAIALITFV-IW-------LFALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFD 283 (562)
T ss_pred HHHHHHHHHHH-HH-------HHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEEC
Confidence 55543333222 22 24788899999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCceEEEEEeeeecccCCChHHHHHHHHHhccccCCChHHHHHHHhhcChhhhhcCceEeeecCCCCCCceEEE
Q 044543 343 KTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAI 422 (962)
Q Consensus 343 KTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv 422 (962)
||||||+|+|++.+... + .+.++++++.+++..+... .||++.|+++++..........+..+.+| .+....
T Consensus 284 KTGTLT~g~~~v~~i~~--~-~~~~~~~~l~~aa~~e~~s-~HPia~Ai~~~~~~~~~~~~~~~~~~~~~----g~Gi~~ 355 (562)
T TIGR01511 284 KTGTLTQGKPTVTDVHV--F-GDRDRTELLALAAALEAGS-EHPLAKAIVSYAKEKGITLVEVSDFKAIP----GIGVEG 355 (562)
T ss_pred CCCCCcCCCEEEEEEec--C-CCCCHHHHHHHHHHHhccC-CChHHHHHHHHHHhcCCCcCCCCCeEEEC----CceEEE
Confidence 99999999999998652 2 2456778888887766554 49999999988753211111111112221 122222
Q ss_pred EEEcCCCCEEEEEeCcHHHHHHHhccchHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCCC
Q 044543 423 TYIDSDGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPP 502 (962)
Q Consensus 423 ~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~l 502 (962)
. .+| ..+..|+++.+.+... + ++++.++|.+++.++... +++|.+.++|++
T Consensus 356 ~---~~g--~~~~iG~~~~~~~~~~---~--------~~~~~~~g~~~~~~~~~~-------------~~~g~~~~~d~l 406 (562)
T TIGR01511 356 T---VEG--TKIQLGNEKLLGENAI---K--------IDGKAEQGSTSVLVAVNG-------------ELAGVFALEDQL 406 (562)
T ss_pred E---ECC--EEEEEECHHHHHhCCC---C--------CChhhhCCCEEEEEEECC-------------EEEEEEEecccc
Confidence 2 245 4577899998643211 1 112457899999888754 899999999999
Q ss_pred CccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhH
Q 044543 503 RHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHK 582 (962)
Q Consensus 503 r~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK 582 (962)
|||++++|++|++.|++++|+|||+..+|..+++++|+. +|+++.|++|
T Consensus 407 ~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~K 455 (562)
T TIGR01511 407 RPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-------------------------------VRAEVLPDDK 455 (562)
T ss_pred cHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-------------------------------EEccCChHHH
Confidence 999999999999999999999999999999999999972 4788899999
Q ss_pred HHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 583 YEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYA 662 (962)
Q Consensus 583 ~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~ 662 (962)
.++++.+|++++.|+|+|||.||+||+++|||||+||.|++.++++||+++.+++++.+..++++||++++++++++.|+
T Consensus 456 ~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a 535 (562)
T TIGR01511 456 AALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWA 535 (562)
T ss_pred HHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCchHH
Q 044543 663 VSITIRIVLGFLLIALIWKFDFSPF 687 (962)
Q Consensus 663 ~~~ni~~~l~~~~~~~~~~~~~~p~ 687 (962)
+.+|+..+...+...+.+++.++|+
T Consensus 536 ~~~n~~~i~la~~~~~~~g~~~~p~ 560 (562)
T TIGR01511 536 FGYNVIAIPIAAGVLYPIGILLSPA 560 (562)
T ss_pred HHHHHHHHHHHHhhhhccccccCCC
Confidence 9999876655554444555556553
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-73 Score=712.44 Aligned_cols=520 Identities=23% Similarity=0.319 Sum_probs=437.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCeeecceEEEecCC
Q 044543 107 QDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDP 186 (962)
Q Consensus 107 ~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~ 186 (962)
..+..+++++.+...++.+.+.|+.+++++|.+..|++++|+|||++++|+.++|+|||+|.|++||+|||||+|++| .
T Consensus 287 ~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g-~ 365 (834)
T PRK10671 287 EASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG-E 365 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEc-e
Confidence 446677888888888898989999999999999999999999999999999999999999999999999999999999 5
Q ss_pred eeEecccccCCCeeeecCCCCcccccceeecceEEEEEEEecchhHHHhHHHhhhcc-CCCChHHHHHHHHHHHHHHHHH
Q 044543 187 LKIDQSALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQEGHFQKVLTAIGNFCICSIA 265 (962)
Q Consensus 187 ~~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~i~ 265 (962)
+.||||+|||||.|+.|.+||.+|+||.+.+|.+.++|+++|.+|.+||+.++++++ .+++++|+..++++.+++.+++
T Consensus 366 ~~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~ 445 (834)
T PRK10671 366 AWLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVV 445 (834)
T ss_pred EEEeehhhcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999876 4788999999999988776655
Q ss_pred HHHHHHHHHHhhccc-cchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCcccccCchHHhhcCceEEEeccc
Q 044543 266 IGMVIEIIVMYPIQH-RAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKT 344 (962)
Q Consensus 266 ~~~~~~~~~~~~~~~-~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKT 344 (962)
++.++.+++++.... ..+..++..++++++++|||+|++++|+++..+..+++++|+++|+++++|+|+++|++|||||
T Consensus 446 ~~a~~~~~~~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKT 525 (834)
T PRK10671 446 VIALVSAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKT 525 (834)
T ss_pred HHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCC
Confidence 544443333333211 1255678889999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCceEEEEEeeeecccCCChHHHHHHHHHhccccCCChHHHHHHHhhcChhhhhcCceEeeecCCCCCCceEEEEE
Q 044543 345 GTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITY 424 (962)
Q Consensus 345 GTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~ 424 (962)
||||+|+|+|.+... ..+.++++++.+++..+... .||++.|+++++.+. ... ...+|.....+ .+..
T Consensus 526 GTLT~g~~~v~~~~~---~~~~~~~~~l~~a~~~e~~s-~hp~a~Ai~~~~~~~-----~~~--~~~~~~~~~g~-Gv~~ 593 (834)
T PRK10671 526 GTLTEGKPQVVAVKT---FNGVDEAQALRLAAALEQGS-SHPLARAILDKAGDM-----TLP--QVNGFRTLRGL-GVSG 593 (834)
T ss_pred CccccCceEEEEEEc---cCCCCHHHHHHHHHHHhCCC-CCHHHHHHHHHHhhC-----CCC--CcccceEecce-EEEE
Confidence 999999999987542 22456777888877766544 499999998876421 110 11122222211 1111
Q ss_pred EcCCCCEEEEEeCcHHHHHHHhccchHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCCCCc
Q 044543 425 IDSDGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPRH 504 (962)
Q Consensus 425 ~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~ 504 (962)
. .+| ..+.+|+++.+.+.... .+.+.+.+++++++|.++++++++. +++|.+.+.|++||
T Consensus 594 ~-~~g--~~~~~G~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~~~l~d~~r~ 653 (834)
T PRK10671 594 E-AEG--HALLLGNQALLNEQQVD----TKALEAEITAQASQGATPVLLAVDG-------------KAAALLAIRDPLRS 653 (834)
T ss_pred E-ECC--EEEEEeCHHHHHHcCCC----hHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEccCcchh
Confidence 1 245 35677999987542211 2345566778889999999999865 79999999999999
Q ss_pred cHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHH
Q 044543 505 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYE 584 (962)
Q Consensus 505 ~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~ 584 (962)
|++++|++|++.|++++|+|||+..+|..+++++|+. ++|+++.|++|.+
T Consensus 654 ~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~------------------------------~~~~~~~p~~K~~ 703 (834)
T PRK10671 654 DSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID------------------------------EVIAGVLPDGKAE 703 (834)
T ss_pred hHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC------------------------------EEEeCCCHHHHHH
Confidence 9999999999999999999999999999999999984 2689999999999
Q ss_pred HHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 585 IVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVS 664 (962)
Q Consensus 585 iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~ 664 (962)
+++.+|++++.|+|+|||.||+|||++||+||+||+|++.++++||+++++++++.|..++++||+++++|++|+.|++.
T Consensus 704 ~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~ 783 (834)
T PRK10671 704 AIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFI 783 (834)
T ss_pred HHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-hcCCchHHHH
Q 044543 665 ITIRIVLGFLLIALI-WKFDFSPFMV 689 (962)
Q Consensus 665 ~ni~~~l~~~~~~~~-~~~~~~p~~i 689 (962)
+|+..+...++.... +++.++|+.-
T Consensus 784 yn~~~i~~a~g~~~p~~g~~l~p~~a 809 (834)
T PRK10671 784 YNSLGIPIAAGILWPFTGTLLNPVVA 809 (834)
T ss_pred HHHHHHHHHHhchhhhhhcccCHHHH
Confidence 998765544322221 2334677643
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-72 Score=636.33 Aligned_cols=569 Identities=24% Similarity=0.287 Sum_probs=427.0
Q ss_pred CCHHHHHHHcCCCCCCCCH-HHHHHHHhhcCCCccCccccchHHHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCCCChhh
Q 044543 30 IPINEVFEQLKCTREGLSN-EEGQKRLVIFGPNKLEEKKESKVLKFLGFMWNPLSWVMEIAAIMAIALANGGGKPPDWQD 108 (962)
Q Consensus 30 ~~~~~~~~~l~~~~~GLt~-~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~ 108 (962)
.|.++.+-.++. .+|+.. +|+..-.++||.|+.+...+++-..|.+....|+ ++|.+..+..|.+. .+|+.
T Consensus 148 fp~~~~~g~~~k-~~G~~~~~~i~~a~~~~G~N~fdi~vPtF~eLFkE~A~aPf-FVFQVFcvgLWCLD------eyWYy 219 (1160)
T KOG0209|consen 148 FPTDEPFGYFQK-STGHEEESEIKLAKHKYGKNKFDIVVPTFSELFKEHAVAPF-FVFQVFCVGLWCLD------EYWYY 219 (1160)
T ss_pred cCcCCcchhhhh-ccCcchHHHHHHHHHHhcCCccccCCccHHHHHHHhccCce-eeHhHHhHHHHHhH------HHHHH
Confidence 345554444443 356663 3444444569999999999999899999999999 67777777777775 47888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEeC---CCeeecceEEEecC
Q 044543 109 FVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKL---GDIIPADARLLDGD 185 (962)
Q Consensus 109 ~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~---Gd~VPaD~~ll~g~ 185 (962)
.+.-+++++..-.--..|..+.-+.... |...+..+.|+|+++|+.+..+||.|||+|.|.. ...||||.+|+.|
T Consensus 220 SlFtLfMli~fE~tlV~Qrm~~lse~R~-Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~G- 297 (1160)
T KOG0209|consen 220 SLFTLFMLIAFEATLVKQRMRTLSEFRT-MGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRG- 297 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEec-
Confidence 7776666555433333444433332222 2334567899999999999999999999999976 6689999999999
Q ss_pred CeeEecccccCCCeeeecCC-----------------CCcccccceeec-------------ceEEEEEEEecchhHHHh
Q 044543 186 PLKIDQSALTGESLPVTKMP-----------------GDEVFSGSTCKQ-------------GEIEAVVIATGVHTFFGK 235 (962)
Q Consensus 186 ~~~Vdes~LTGEs~pv~K~~-----------------g~~v~~Gs~v~~-------------G~~~~~V~~tG~~T~~gk 235 (962)
+|.|||++|||||.|..|.+ ...+|.||.+++ |-+.+.|++||.+|..|+
T Consensus 298 sciVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGk 377 (1160)
T KOG0209|consen 298 SCIVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGK 377 (1160)
T ss_pred ceeechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCc
Confidence 58999999999999999986 136999999986 558999999999999998
Q ss_pred HHHhhhc-cCCCC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc------cchHhHHHHHHHHHHhccCCchHHHH
Q 044543 236 AAHLVDS-TNQEG--HFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQH------RAYRNGIDNLLVLLIGGIPIAMPTVL 306 (962)
Q Consensus 236 i~~l~~~-~~~~~--~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~------~~~~~~~~~~l~lli~~iP~aL~~~~ 306 (962)
+.+.+-- +++.+ ..+.. .++..+++++++ ...|.+.. ++-..-+.-+..++...+|..||+-+
T Consensus 378 LvRtilf~aervTaNn~Etf------~FILFLlVFAia--Aa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmEL 449 (1160)
T KOG0209|consen 378 LVRTILFSAERVTANNRETF------IFILFLLVFAIA--AAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMEL 449 (1160)
T ss_pred eeeeEEecceeeeeccHHHH------HHHHHHHHHHHH--hhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhh
Confidence 7665533 22222 12211 112222222222 22232211 12223455566678889999999999
Q ss_pred HHHHHHHHHHHhcCCcccccCchHHhhcCceEEEecccccccCCceEEEEEeeeecc-------cCCChHHHHHHHHHhc
Q 044543 307 SVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFV-------KDMDKDTVILYGARAS 379 (962)
Q Consensus 307 ~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~-------~~~~~~~~l~~a~~~~ 379 (962)
+++.-.+...|+|.+++|..+-.+.-.|++|+.|||||||||...|.|...--.... .....+.+..+|++.+
T Consensus 450 SmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHs 529 (1160)
T KOG0209|consen 450 SMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHS 529 (1160)
T ss_pred hHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999874310000 0112234444444433
Q ss_pred c-----ccCCChHHHHHHHhhcChhh----------hhcCceEeeecCCCCCCceEEEEEEcCC----CCEEEEEeCcHH
Q 044543 380 R-----VENQDAIDACIVGMLGDAKE----------ARAGITELHFLPFNPVEKRTAITYIDSD----GSWHRISKGAPE 440 (962)
Q Consensus 380 ~-----~~~~~~~~~al~~~~~~~~~----------~~~~~~~l~~~pF~s~~kr~sv~~~~~~----g~~~~~~KGa~e 440 (962)
- .--+||+|.|.+..++..-+ ...+.++.+.+.|+|.-|||+++....+ -+++..+|||||
T Consensus 530 Lv~le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPE 609 (1160)
T KOG0209|consen 530 LVLLEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPE 609 (1160)
T ss_pred HHHhcCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHH
Confidence 1 12369999999998853221 1124677888999999999999876321 357888999999
Q ss_pred HHHHHhccchHHHHHHHHHHHHHHhcCCeEEEEEeecCCC--------CCCCCCCCCceEEEEeecCCCCCccHHHHHHH
Q 044543 441 QIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPE--------KTKESPGGPWQFVGLLPLFDPPRHDSAETIRR 512 (962)
Q Consensus 441 ~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~--------~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~ 512 (962)
.|-++.. ++++.+++...+|+++|.||||++||+++. -.+|+.|.+|+|.|++.|..|+|+|++++|+.
T Consensus 610 vi~~ml~---dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~e 686 (1160)
T KOG0209|consen 610 VIQEMLR---DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKE 686 (1160)
T ss_pred HHHHHHH---hCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHH
Confidence 9999875 677888899999999999999999999873 23688999999999999999999999999999
Q ss_pred HHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccc---------------------------------------ccc
Q 044543 513 ALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSAL---------------------------------------LGQ 553 (962)
Q Consensus 513 l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l---------------------------------------~~~ 553 (962)
|++.+.+|+||||||+.||.++|+++||..+..+...+ +|.
T Consensus 687 l~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~ 766 (1160)
T KOG0209|consen 687 LNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGS 766 (1160)
T ss_pred HhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchh
Confidence 99999999999999999999999999996542111100 111
Q ss_pred chhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEcc
Q 044543 554 IKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVA 619 (962)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg 619 (962)
..+.....+.+.+++..+.||||+.|.||..++..||+.|+.++|||||.||+.|||+||||||+-
T Consensus 767 ~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL 832 (1160)
T KOG0209|consen 767 ALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALL 832 (1160)
T ss_pred HHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehh
Confidence 111111222445666778899999999999999999999999999999999999999999999984
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-62 Score=532.28 Aligned_cols=521 Identities=25% Similarity=0.369 Sum_probs=404.6
Q ss_pred hhhhhHHHHHHHHHHHHHHHH----cCCCCCCChhhHHHHHHHHHHHHHH----HHHHHHhhhhHHHHhhcCC-CCeEEE
Q 044543 77 FMWNPLSWVMEIAAIMAIALA----NGGGKPPDWQDFVGIVVLLLINSTI----SFIEENNAGNAAAALMAGL-APQTKV 147 (962)
Q Consensus 77 ~~~~~~~~~l~~~ail~~~l~----~~~~~~~~~~~~~~i~~~~~i~~~i----~~~~e~~~~~~~~~l~~~~-~~~~~V 147 (962)
+.+||..++.++.++++.++. ..++...++.....|.+++++..++ +.+.|-|-+...++|++.. ...+++
T Consensus 29 ~~kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~ 108 (681)
T COG2216 29 LVKNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARL 108 (681)
T ss_pred hhhCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Confidence 467888877777777776332 1122122333333444444444333 4444544444455665432 235667
Q ss_pred EEC-CeEEEEECcCcCCCcEEEEeCCCeeecceEEEecCCeeEecccccCCCeeeecCCC---CcccccceeecceEEEE
Q 044543 148 LRD-GAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTKMPG---DEVFSGSTCKQGEIEAV 223 (962)
Q Consensus 148 ~Rd-g~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g---~~v~~Gs~v~~G~~~~~ 223 (962)
+++ |.++.+++.+|+.||+|.++.||.||+||.+++| ..+||||++||||.||.|.+| +-+-.||.+.+.+++..
T Consensus 109 l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG-~asVdESAITGESaPViresGgD~ssVtGgT~v~SD~l~ir 187 (681)
T COG2216 109 LRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIR 187 (681)
T ss_pred hcCCCCeeeccccccccCCEEEEecCCCccCCCeEEee-eeecchhhccCCCcceeeccCCCcccccCCcEEeeeeEEEE
Confidence 775 8999999999999999999999999999999999 579999999999999999998 67899999999999999
Q ss_pred EEEecchhHHHhHHHhhhcc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--cccchHhHHHHHHHHHHhccCC
Q 044543 224 VIATGVHTFFGKAAHLVDST-NQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPI--QHRAYRNGIDNLLVLLIGGIPI 300 (962)
Q Consensus 224 V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~l~lli~~iP~ 300 (962)
+++.-.+|++.|+..+++.+ ++++|-+--++.+..- +.++++++. .-.|++ +...-.-.+...++++++.||-
T Consensus 188 ita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~---LTliFL~~~-~Tl~p~a~y~~g~~~~i~~LiALlV~LIPT 263 (681)
T COG2216 188 ITANPGETFLDRMIALVEGAERQKTPNEIALTILLSG---LTLIFLLAV-ATLYPFAIYSGGGAASVTVLVALLVCLIPT 263 (681)
T ss_pred EEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHH---HHHHHHHHH-HhhhhHHHHcCCCCcCHHHHHHHHHHHhcc
Confidence 99999999999999999877 4666655444332111 111111111 112221 1101113466788999999999
Q ss_pred chHHHHHHHHHHHHHHHhcCCcccccCchHHhhcCceEEEecccccccCCceEEEEEeeeecccCCChHHHHHHHHHhcc
Q 044543 301 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASR 380 (962)
Q Consensus 301 aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~ 380 (962)
...--++..-..|+.|+.+.|++.++..++|..|.+|++..|||||+|.|+-.-.+.. -..+.+.+++...+..++-
T Consensus 264 TIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~---p~~gv~~~~la~aa~lsSl 340 (681)
T COG2216 264 TIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFI---PVPGVSEEELADAAQLASL 340 (681)
T ss_pred cHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhhee---cCCCCCHHHHHHHHHHhhh
Confidence 9988888888889999999999999999999999999999999999999876555544 2457788888777776654
Q ss_pred ccCCChHHHHHHHhhcChhh-hh-cCce-EeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhccch-HHHHHH
Q 044543 381 VENQDAIDACIVGMLGDAKE-AR-AGIT-ELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNLRE-DVRNKA 456 (962)
Q Consensus 381 ~~~~~~~~~al~~~~~~~~~-~~-~~~~-~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~-~~~~~~ 456 (962)
. .+.|--..++..+.+... .+ +... ...+.||+.+.+++.+-. ++| ..+.|||.+.+.+..+... ..++.+
T Consensus 341 ~-DeTpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~~~~g~~p~~l 415 (681)
T COG2216 341 A-DETPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVRERGGHIPEDL 415 (681)
T ss_pred c-cCCCCcccHHHHHHHhccCCCcccccccceeeecceecccccccC--CCC--ceeecccHHHHHHHHHhcCCCCCHHH
Confidence 3 335555666666543211 11 1111 357899998776555432 234 6788999999999876433 367888
Q ss_pred HHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHH
Q 044543 457 HTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGR 536 (962)
Q Consensus 457 ~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~ 536 (962)
+...++-++.|-..|+++... +++|.+.+.|-+++|.+|-+.+||+.|||++|+||||+.||..||+
T Consensus 416 ~~~~~~vs~~GGTPL~V~~~~-------------~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~ 482 (681)
T COG2216 416 DAAVDEVSRLGGTPLVVVENG-------------RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAA 482 (681)
T ss_pred HHHHHHHHhcCCCceEEEECC-------------EEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHH
Confidence 899999999999999999866 9999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeE
Q 044543 537 RLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGI 616 (962)
Q Consensus 537 ~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGI 616 (962)
+.|.++ ..|.++||+|.++|+.-|.+|+.|+|||||.||+|||.+||||+
T Consensus 483 EAGVDd------------------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~ 532 (681)
T COG2216 483 EAGVDD------------------------------FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGV 532 (681)
T ss_pred HhCchh------------------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhh
Confidence 999852 47899999999999999999999999999999999999999999
Q ss_pred EccCchHHHHhcccccccCCCchHHHHHHHHHHHHHH
Q 044543 617 AVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQ 653 (962)
Q Consensus 617 amg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~ 653 (962)
||.+||++||+|+.+|=+|.+...+.+.++.|++..-
T Consensus 533 AMNsGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLi 569 (681)
T COG2216 533 AMNSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLI 569 (681)
T ss_pred hhccccHHHHHhhcccccCCCccceehHhhhhhhhee
Confidence 9999999999999999999999999999999998643
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=314.05 Aligned_cols=221 Identities=35% Similarity=0.532 Sum_probs=194.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCe-EEEEECCeEEEEECcCcCCCcEEEEeCCCeeecceEEEe-cCCee
Q 044543 111 GIVVLLLINSTISFIEENNAGNAAAALMAGLAPQ-TKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLD-GDPLK 188 (962)
Q Consensus 111 ~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~-~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~-g~~~~ 188 (962)
+|+++++++.++++++++++++..+++++..+++ ++|+|||+++++++++|+|||+|.|++||.+||||+|++ | .+.
T Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g-~~~ 79 (230)
T PF00122_consen 1 VILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESG-SAY 79 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESS-EEE
T ss_pred CEEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecc-ccc
Confidence 3677788899999999999999999999988887 999999999999999999999999999999999999999 6 799
Q ss_pred EecccccCCCeeeecC-----CCCcccccceeecceEEEEEEEecchhHHHhHHHhhhccC-CCChHHHHHHHHHHHHHH
Q 044543 189 IDQSALTGESLPVTKM-----PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QEGHFQKVLTAIGNFCIC 262 (962)
Q Consensus 189 Vdes~LTGEs~pv~K~-----~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~-~~~~l~~~~~~i~~~~~~ 262 (962)
||||+||||+.|+.|. .++.+|+||.+.+|++.++|++||.+|..|++.+.+.... +++++++.++++..+++.
T Consensus 80 vd~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (230)
T PF00122_consen 80 VDESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILII 159 (230)
T ss_dssp EECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHh
Confidence 9999999999999999 9999999999999999999999999999999999887664 568999999999988766
Q ss_pred HHHHHHHHHHHHHhh-ccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCcccccCchHHh
Q 044543 263 SIAIGMVIEIIVMYP-IQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEE 332 (962)
Q Consensus 263 ~i~~~~~~~~~~~~~-~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~ 332 (962)
.++++.++.+++++. ....++...+..++++++.+||++||+++++++..++++|+++|+++|+++++|+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 160 IILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred cccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 555544443333222 2466778889999999999999999999999999999999999999999999995
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.7e-26 Score=239.93 Aligned_cols=211 Identities=31% Similarity=0.430 Sum_probs=152.0
Q ss_pred ceEEEecccccccCCceEEEEEeeeecccCCChHHHHHHHHHhccccCCChHHHHHHHhhcChhhhhcCceEeeecCCCC
Q 044543 336 MDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNP 415 (962)
Q Consensus 336 v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pF~s 415 (962)
|++||||||||||+|+|.+ . . .+.+.++..+...+.. ..||+..++..+....... ... .+|..
T Consensus 1 i~~i~fDktGTLt~~~~~v---~---~---~~~~~~~~~~~~~~~~-s~~p~~~~~~~~~~~~~~~-~~~-----~~~~~ 64 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV---A---P---PSNEAALAIAAALEQG-SEHPIGKAIVEFAKNHQWS-KSL-----ESFSE 64 (215)
T ss_dssp ESEEEEECCTTTBESHHEE---E---S---CSHHHHHHHHHHHHCT-STSHHHHHHHHHHHHHHHH-SCC-----EEEEE
T ss_pred CeEEEEecCCCcccCeEEE---E---e---ccHHHHHHHHHHhhhc-CCCcchhhhhhhhhhccch-hhh-----hhhee
Confidence 6899999999999999998 1 1 4455666666555443 4499999998877643222 111 11111
Q ss_pred CCceEEEEEEcCCCCEEEEEeCcHHHHHHHhccchHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEE
Q 044543 416 VEKRTAITYIDSDGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGL 495 (962)
Q Consensus 416 ~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~ 495 (962)
...++..... ++. +. |+++.+.+..... ... ..........|.+.+.++. +++++|.
T Consensus 65 ~~~~~~~~~~--~~~---~~-g~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ 121 (215)
T PF00702_consen 65 FIGRGISGDV--DGI---YL-GSPEWIHELGIRV--ISP--DLVEEIQESQGRTVIVLAV-------------NLIFLGL 121 (215)
T ss_dssp ETTTEEEEEE--HCH---EE-HHHHHHHHHHHHH--HHH--HHHHHHHHHHHHHCEEEEE-------------SHEEEEE
T ss_pred eeeccccccc--ccc---cc-ccchhhhhccccc--ccc--chhhhHHHhhCCcccceee-------------cCeEEEE
Confidence 1122221111 121 22 8888877655321 111 1112223445555565554 4599999
Q ss_pred eecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEE
Q 044543 496 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFA 575 (962)
Q Consensus 496 i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a 575 (962)
+.+.|++|+|++++|+.|+++|++++|+|||+..+|.++++++||.. ..+|+
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----------------------------~~v~a 173 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----------------------------SIVFA 173 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----------------------------EEEEE
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----------------------------ccccc
Confidence 99999999999999999999999999999999999999999999832 24799
Q ss_pred ec--CHhhH--HHHHHHHhhCCCEEEEEcCCcCChhhhhcCC
Q 044543 576 GV--FPEHK--YEIVRKLQERKHICGMTGDGVNDAPALKKAD 613 (962)
Q Consensus 576 rv--sP~qK--~~iV~~lq~~g~~v~miGDG~ND~~aLk~Ad 613 (962)
++ +|++| .++++.||.+++.|+|+|||+||++|+++||
T Consensus 174 ~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 174 RVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp SHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99 99999 9999999977779999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.1e-15 Score=136.08 Aligned_cols=123 Identities=27% Similarity=0.396 Sum_probs=108.5
Q ss_pred eEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhh
Q 044543 491 QFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEK 570 (962)
Q Consensus 491 ~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 570 (962)
...+.++---++=++++++|++|++. ++|++.|||...+-...|.-+||+.+
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 55778888888899999999999999 99999999999999999999998643
Q ss_pred cceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEc-c--CchHHHHhcccccccCCCchHHHHH
Q 044543 571 ADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAV-A--DATDAARGASDIVLTEPGLSVIVSA 644 (962)
Q Consensus 571 ~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIam-g--~gt~~a~~aaDivl~~~~~~~i~~~ 644 (962)
.+|+..-|+.|+++++.|++++++|.|+|||+||.+||++||+||.. + +.++-+.++||+++-+ ...++++
T Consensus 72 -rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl 145 (152)
T COG4087 72 -RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDL 145 (152)
T ss_pred -eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHH
Confidence 57999999999999999999999999999999999999999999987 4 5667788999999944 4444444
|
|
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.39 E-value=7.7e-10 Score=125.49 Aligned_cols=209 Identities=18% Similarity=0.218 Sum_probs=144.1
Q ss_pred CceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCccccc-----------------
Q 044543 489 PWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALL----------------- 551 (962)
Q Consensus 489 ~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~----------------- 551 (962)
+-.|.|++....+++.+....|+.|-++-|+.+-.+-.+....+-.|.++||.........+.
T Consensus 814 GQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~ 893 (1354)
T KOG4383|consen 814 GQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQF 893 (1354)
T ss_pred cchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhh
Confidence 346899999999999999999999999999999999999999999999999965221111110
Q ss_pred -c-------------------cchh-----------ccC--------CcchH-----------------HHHhhhcceEE
Q 044543 552 -G-------------------QIKD-----------ANI--------SALPV-----------------DELIEKADGFA 575 (962)
Q Consensus 552 -~-------------------~~~~-----------~~~--------~~~~~-----------------~~~~~~~~v~a 575 (962)
+ ...+ ..+ ++.++ |..-.-+..|.
T Consensus 894 a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFT 973 (1354)
T KOG4383|consen 894 AAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFT 973 (1354)
T ss_pred hccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeecc
Confidence 0 0000 000 00001 11111122588
Q ss_pred ecCHhhHHHHHHHHhhCCCEEEEEcCCcCCh--hhhhcCCeeEEccC-------------chHH--HH------------
Q 044543 576 GVFPEHKYEIVRKLQERKHICGMTGDGVNDA--PALKKADIGIAVAD-------------ATDA--AR------------ 626 (962)
Q Consensus 576 rvsP~qK~~iV~~lq~~g~~v~miGDG~ND~--~aLk~AdVGIamg~-------------gt~~--a~------------ 626 (962)
.++|+.-.++++.+|+.|++|+.+|.-.|-. -..-+|||+|++.+ ++.. |+
T Consensus 974 DcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSg 1053 (1354)
T KOG4383|consen 974 DCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISG 1053 (1354)
T ss_pred CCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeecc
Confidence 9999999999999999999999999999843 34578999999842 1111 11
Q ss_pred ----hcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCchHHHHHHHHHHhh
Q 044543 627 ----GASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLL-IALIWKFDFSPFMVLIIAILND 697 (962)
Q Consensus 627 ----~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~-~~~~~~~~~~p~~il~i~l~~~ 697 (962)
-++|+-+.+..+-+|..+|+-+|....-+|+.++|.++......+..+. ..++.+..|+--+++|...|--
T Consensus 1054 qLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~ 1129 (1354)
T KOG4383|consen 1054 QLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCI 1129 (1354)
T ss_pred cccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHH
Confidence 1233334334455678888999999999999999998877655544444 3445566677677777776653
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.31 E-value=4.3e-12 Score=108.72 Aligned_cols=67 Identities=36% Similarity=0.540 Sum_probs=61.2
Q ss_pred cccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccC-ccccchHHHHHHhhhhhHHHHHHHHHHHH
Q 044543 27 LERIPINEVFEQLKCT-REGLSNEEGQKRLVIFGPNKLE-EKKESKVLKFLGFMWNPLSWVMEIAAIMA 93 (962)
Q Consensus 27 ~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~-~~~~~~~~~~l~~~~~~~~~~l~~~ail~ 93 (962)
+|.++.+++++.|+++ .+|||++||++|+++||+|+++ .+++++|..|+++|.+|+.+++++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 5889999999999965 8899999999999999999995 55678899999999999999999999886
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.15 E-value=6.4e-10 Score=114.42 Aligned_cols=166 Identities=17% Similarity=0.216 Sum_probs=114.2
Q ss_pred cCCchHHHHHHHHHHhhhc-hhccccCCCCCC-----C--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 044543 681 KFDFSPFMVLIIAILNDGT-IMTISKDRVKPS-----P--VPDTWKLKEIFATGIVLGTYLAVMTVLFFWAIHSSTFFSE 752 (962)
Q Consensus 681 ~~~~~p~~il~i~l~~~~~-~~~l~~d~~~~~-----~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 752 (962)
|.|++|+|++|+|+++|++ ++++++|+.+++ | +.++...++.+...+..|+++++++++.|+.....
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~----- 75 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYI----- 75 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHS-----
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhc-----
Confidence 4689999999999999997 799999887553 2 22333456677777899999999999888776531
Q ss_pred cccccc--cCCChhHHHHHHHHHHHHHHHHHHhhhccCCCCccc----chhHHHHHHHHHHHHHHHHHHHhhc--ccccc
Q 044543 753 KFGVRS--IRDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLE----RPGLLLIAAFIIAQLVATLIAVYAN--FGFAR 824 (962)
Q Consensus 753 ~~g~~~--~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~ 824 (962)
+|... ...+..+.+|++|..+++++.++.++.|+.+.+.+. ..|.+++.+++++.++..++ +|.+ -..++
T Consensus 76 -~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i-~~~P~~~~~f~ 153 (182)
T PF00689_consen 76 -FGWDEETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILI-VYVPGLNRIFG 153 (182)
T ss_dssp -TCSSSHHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHH-HHSTTHHHHST
T ss_pred -cccccccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHH-hcchhhHhhhc
Confidence 22111 011245689999999999999999999996643222 23557777777666544443 5543 23456
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 825 IHGIGWGWVGVIWLYSIVFYIPLDVLKFI 853 (962)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~K~~ 853 (962)
+.+.++..|+.+++++++.++..|++|++
T Consensus 154 ~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 154 TAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp ----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 77888888888899999999999999974
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=98.99 E-value=8e-10 Score=93.19 Aligned_cols=60 Identities=38% Similarity=0.651 Sum_probs=53.6
Q ss_pred HcCCCC-CCCCHHHHHHHHhhcCCCccCccc-cchHHHHHHhhhhhHHHHHHHHHHHHHHHH
Q 044543 38 QLKCTR-EGLSNEEGQKRLVIFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEIAAIMAIALA 97 (962)
Q Consensus 38 ~l~~~~-~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~~ail~~~l~ 97 (962)
.|+++. .|||++|+++|+++||+|+++.++ .++|..|+++|++|+.++++++++++++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 366774 499999999999999999998775 788999999999999999999999998863
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.88 E-value=9.9e-09 Score=107.28 Aligned_cols=131 Identities=15% Similarity=0.122 Sum_probs=96.2
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
+++|++.+.|+.+++.| ++.++||-....+..+++++|+..-..+...+.+. ...++ .--..|+
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~---g~~tG------------~~~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDS---DRVVG------------YQLRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecC---CeeEC------------eeecCcc
Confidence 57999999999999975 99999999999999999999986321111111000 00000 0114578
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTS 648 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~g 648 (962)
+|..+++.+++.|..+.|+|||.||.||++.||+||++.....+.+.+-|+-. -.+.+.+..++.++
T Consensus 132 ~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~-~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPA-VHTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCc-ccCHHHHHHHHHHH
Confidence 99999999998888899999999999999999999999765555554444433 34677777777654
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=8.3e-09 Score=115.10 Aligned_cols=132 Identities=19% Similarity=0.266 Sum_probs=98.9
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.|++.+.|+.|++.|+++.++||.....+..+.+++|+.....+...+... ...+.... + -+..+
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg----~ltg~v~g------~---iv~~k 247 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDG----KLTGNVLG------D---IVDAQ 247 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECC----EEEeEecC------c---cCCcc
Confidence 47899999999999999999999999988888999999985311000000000 00000000 0 02346
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
.|.+.++.+.++ | +.|.++|||.||.+|++.|++|||+ ++.+..++.||.++..+++..++.++-
T Consensus 248 ~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 248 YKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred cHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 899888888654 3 5799999999999999999999999 888999999999999889988887663
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.7e-08 Score=107.01 Aligned_cols=129 Identities=22% Similarity=0.290 Sum_probs=93.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEe-cCH
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAG-VFP 579 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar-vsP 579 (962)
++++++.+.++.|++.|+++.++||.....+..+.+.+|+..- ........ +....+ .+.+. ..+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~-~~~~~~~~---~~~~~~----------~~~~~~~~~ 150 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAA-FANRLEVE---DGKLTG----------LVEGPIVDA 150 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce-EeeEEEEE---CCEEEE----------EecCcccCC
Confidence 5899999999999999999999999999999999999998531 11000000 000000 00011 123
Q ss_pred hhHHHHHHHHhhCC----CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHH
Q 044543 580 EHKYEIVRKLQERK----HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSA 644 (962)
Q Consensus 580 ~qK~~iV~~lq~~g----~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~ 644 (962)
..|..+++.+.++. ..|.|+||+.||.+|+++|+++++++ +.+..+++||++|.+++|..+...
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 151 SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 34777777665542 35889999999999999999999985 457788899999999998887654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=3.8e-08 Score=105.11 Aligned_cols=153 Identities=25% Similarity=0.306 Sum_probs=104.8
Q ss_pred EEeecCCC-CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCC--Ccccc-c---ccc-----h------
Q 044543 494 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--PSSAL-L---GQI-----K------ 555 (962)
Q Consensus 494 G~i~i~D~-lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~--~~~~l-~---~~~-----~------ 555 (962)
|.+.-.|+ +.+.+.++|++|++.|+++.+.||.....+..+.+.+|+..... +...+ . +.. .
T Consensus 12 GTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~ 91 (230)
T PRK01158 12 GTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKA 91 (230)
T ss_pred CCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHH
Confidence 33333444 67899999999999999999999999999999999999853210 00000 0 000 0
Q ss_pred ------------------hc-----------cCCcchHHHHhhhcc---------eEEecCHhh--HHHHHHHHhhC-C-
Q 044543 556 ------------------DA-----------NISALPVDELIEKAD---------GFAGVFPEH--KYEIVRKLQER-K- 593 (962)
Q Consensus 556 ------------------~~-----------~~~~~~~~~~~~~~~---------v~arvsP~q--K~~iV~~lq~~-g- 593 (962)
+. ....+.+.+.+.+.. .+..+.|.. |..-++.+.+. |
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i 171 (230)
T PRK01158 92 YSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGI 171 (230)
T ss_pred HHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCC
Confidence 00 000011222222111 112334433 77777777653 2
Q ss_pred --CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 594 --HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 594 --~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
..++++||+.||.+|++.|++|+||+++.+.+|+.||+|..+++-.++.++++
T Consensus 172 ~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 172 DPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 35899999999999999999999999999999999999998888888888775
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.5e-08 Score=105.57 Aligned_cols=144 Identities=22% Similarity=0.255 Sum_probs=99.1
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCC--Ccccccc--cc------hh--------------
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--PSSALLG--QI------KD-------------- 556 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~--~~~~l~~--~~------~~-------------- 556 (962)
++.+++.++|++|++.|+++.+.||.....+..+++.+++..... +...+.. .. ..
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 388999999999999999999999999999999999999853211 0000000 00 00
Q ss_pred c----c---------CCc---chHHHHhhhcc--e-----EEecCH--hhHHHHHHHHhhC-C---CEEEEEcCCcCChh
Q 044543 557 A----N---------ISA---LPVDELIEKAD--G-----FAGVFP--EHKYEIVRKLQER-K---HICGMTGDGVNDAP 607 (962)
Q Consensus 557 ~----~---------~~~---~~~~~~~~~~~--v-----~arvsP--~qK~~iV~~lq~~-g---~~v~miGDG~ND~~ 607 (962)
. . .+. +.+.+.+.... + +..++| ..|...++.+.+. | ..++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0 0 000 01112222111 1 122333 4788888877663 3 35899999999999
Q ss_pred hhhcCCeeEEccCchHHHHhcccccccCCCchHHHHH
Q 044543 608 ALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSA 644 (962)
Q Consensus 608 aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~ 644 (962)
|++.|++|+||+++.+.+++.||++..+++-.++.++
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhh
Confidence 9999999999999999999999999987776666554
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.5e-08 Score=91.74 Aligned_cols=65 Identities=26% Similarity=0.445 Sum_probs=54.4
Q ss_pred CCChHHHHHHHhhcC------hhhhhcCceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhcc
Q 044543 383 NQDAIDACIVGMLGD------AKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNL 448 (962)
Q Consensus 383 ~~~~~~~al~~~~~~------~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~ 448 (962)
.++|+|.||+.++.. ....+..++.++.+||||.+|||+++++ .++.+.+++|||||.|+++|+.
T Consensus 20 ~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 20 IGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred cCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 458999999988743 3456788999999999999999999998 3345677999999999999973
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=7.5e-08 Score=105.52 Aligned_cols=66 Identities=21% Similarity=0.221 Sum_probs=55.2
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
.|..-++.|.+. | ..|+++|||.||.+||+.|++|+||++|.+.+|++||+|..+++-.++..+|+
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 455555555442 2 34899999999999999999999999999999999999998888888888875
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.68 E-value=9.8e-08 Score=104.31 Aligned_cols=154 Identities=21% Similarity=0.226 Sum_probs=107.5
Q ss_pred EEeecCCC-CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCC---------ccccc------------
Q 044543 494 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP---------SSALL------------ 551 (962)
Q Consensus 494 G~i~i~D~-lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~---------~~~l~------------ 551 (962)
|.+.-.|. +.+.+.++|+++++.|+++.++||.....+..+.+++|+...... ...+.
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 44444444 899999999999999999999999999999999999999641100 00000
Q ss_pred ---------------c-c-----chh--------------------c----------cCCcchHHHH---hh-----hcc
Q 044543 552 ---------------G-Q-----IKD--------------------A----------NISALPVDEL---IE-----KAD 572 (962)
Q Consensus 552 ---------------~-~-----~~~--------------------~----------~~~~~~~~~~---~~-----~~~ 572 (962)
. . ... . ....+.++++ +. ...
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 0 0 000 0 0000111111 11 011
Q ss_pred eE-------EecCH--hhHHHHHHHHhh-CCC---EEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCch
Q 044543 573 GF-------AGVFP--EHKYEIVRKLQE-RKH---ICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLS 639 (962)
Q Consensus 573 v~-------arvsP--~qK~~iV~~lq~-~g~---~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~ 639 (962)
.+ ..+.| .+|..-++.+.+ .|- .|+++||+.||.+||+.|+.||||+++.+.+++.||++...++-.
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 22 22333 368888887776 344 399999999999999999999999999999999999998899999
Q ss_pred HHHHHHHH
Q 044543 640 VIVSAVLT 647 (962)
Q Consensus 640 ~i~~~i~~ 647 (962)
++.+++++
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 99988864
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.66 E-value=8.3e-08 Score=97.06 Aligned_cols=100 Identities=19% Similarity=0.276 Sum_probs=80.4
Q ss_pred HHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEec--CHhhHHHH
Q 044543 508 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGV--FPEHKYEI 585 (962)
Q Consensus 508 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arv--sP~qK~~i 585 (962)
.+|+.|++.|+++.++|+.+...+..+.+.+|+..- |... .|+--..+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~------------------------------f~~~kpkp~~~~~~ 90 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRF------------------------------HEGIKKKTEPYAQM 90 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEE------------------------------EecCCCCHHHHHHH
Confidence 589999999999999999999999999999998521 1111 24444444
Q ss_pred HHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCC
Q 044543 586 VRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPG 637 (962)
Q Consensus 586 V~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~ 637 (962)
++.++-....|+++||+.||.+|++.|++++||+++.+..+..||+|...++
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~ 142 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARG 142 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCC
Confidence 4444333456999999999999999999999999999999999999986554
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.62 E-value=2.3e-07 Score=98.65 Aligned_cols=146 Identities=23% Similarity=0.304 Sum_probs=99.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCC--Ccccc-ccc--------chh---------c---
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--PSSAL-LGQ--------IKD---------A--- 557 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~--~~~~l-~~~--------~~~---------~--- 557 (962)
.+.+.+.++|+++++.|+++.+.||.+...+..+.+.+|+..... +...+ ... ... .
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 377889999999999999999999999999999999999643110 00000 000 000 0
Q ss_pred -------c-------------CCcchHHHHhhhcc---------eEEecCH--hhHHHHHHHHhhC-C---CEEEEEcCC
Q 044543 558 -------N-------------ISALPVDELIEKAD---------GFAGVFP--EHKYEIVRKLQER-K---HICGMTGDG 602 (962)
Q Consensus 558 -------~-------------~~~~~~~~~~~~~~---------v~arvsP--~qK~~iV~~lq~~-g---~~v~miGDG 602 (962)
. .+.+.+.+++.... .+..+.| ..|..-++.+.++ | ..|+++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0 00011112222111 1223334 3788888777653 3 468999999
Q ss_pred cCChhhhhcCCeeEEccCchHHHHhcccccccCCCchH----HHHHHH
Q 044543 603 VNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSV----IVSAVL 646 (962)
Q Consensus 603 ~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~----i~~~i~ 646 (962)
.||.+|++.|++|+||+++.+.+|+.||+|..+++-.+ +...++
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999988777777 555543
|
catalyze the same reaction as SPP. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.1e-07 Score=95.19 Aligned_cols=97 Identities=28% Similarity=0.410 Sum_probs=78.3
Q ss_pred HHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHH
Q 044543 509 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRK 588 (962)
Q Consensus 509 ~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~ 588 (962)
+|++|++.|+++.++||+....+..+.+++|+... |... ..|.+.++.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~------------------------------~~~~--~~k~~~~~~ 83 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL------------------------------YQGQ--SNKLIAFSD 83 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE------------------------------Eecc--cchHHHHHH
Confidence 99999999999999999999999999999998521 1111 234444444
Q ss_pred Hhh----CCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCC
Q 044543 589 LQE----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPG 637 (962)
Q Consensus 589 lq~----~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~ 637 (962)
+.+ ....|.|+||+.||.+|++.|+++++|.++.+..+..||+++..+.
T Consensus 84 ~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~ 136 (154)
T TIGR01670 84 ILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAG 136 (154)
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCC
Confidence 332 3456999999999999999999999999888889999999997664
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.2e-07 Score=104.13 Aligned_cols=66 Identities=18% Similarity=0.183 Sum_probs=55.4
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccc--cccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDI--VLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDi--vl~~~~~~~i~~~i~ 646 (962)
.|..-++.|.+. | ..|+++|||.||.+||+.|+.||||++|.+.+|++||+ +..+++-.++..+|+
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 477777766553 2 35899999999999999999999999999999999997 666778888888775
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.56 E-value=2.4e-07 Score=97.45 Aligned_cols=119 Identities=20% Similarity=0.208 Sum_probs=85.7
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEe-cC
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAG-VF 578 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar-vs 578 (962)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|+....-+......+ ..++ .+... +.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG----~ltG----------~v~g~~~~ 141 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG----KLTG----------RVVGPICD 141 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC----EEec----------eeeeeecC
Confidence 578999999999999999999999999999999999999996532111111000 0000 12332 34
Q ss_pred HhhHHHHHHHHhh-CCC---EEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccc
Q 044543 579 PEHKYEIVRKLQE-RKH---ICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVL 633 (962)
Q Consensus 579 P~qK~~iV~~lq~-~g~---~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl 633 (962)
.+.|...++.+.+ .|. .+.++|||.||.|||+.|+.+|++...... +..|+...
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~l-~~~a~~~~ 199 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPKL-RALADVRI 199 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHHH-HHHHHHhc
Confidence 5789988866665 354 489999999999999999999999754433 33555544
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.6e-07 Score=101.02 Aligned_cols=66 Identities=20% Similarity=0.226 Sum_probs=53.7
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhccc--ccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASD--IVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaD--ivl~~~~~~~i~~~i~ 646 (962)
.|..-++.+.+. | ..|+++|||.||.+||+.|+.||||++|.+.+|+.|| .|..+++-.++..+|+
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 355555555442 2 3489999999999999999999999999999999988 6777777888888775
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.45 E-value=4.5e-07 Score=97.39 Aligned_cols=146 Identities=18% Similarity=0.228 Sum_probs=100.0
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCC--Ccccc-c--c----------------------
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--PSSAL-L--G---------------------- 552 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~--~~~~l-~--~---------------------- 552 (962)
..+.+.+.++|++++++|+++.+.||.....+..+..++++..... +...+ . +
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 3467999999999999999999999999999999999999862110 00000 0 0
Q ss_pred ----------------cc---hh-------c----------------------cCCcchHHHH-------hhhc-c----
Q 044543 553 ----------------QI---KD-------A----------------------NISALPVDEL-------IEKA-D---- 572 (962)
Q Consensus 553 ----------------~~---~~-------~----------------------~~~~~~~~~~-------~~~~-~---- 572 (962)
.. .. . ..+.+.++++ .... .
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 00 00 0 0000111111 1111 0
Q ss_pred --eEEecCH--hhHHHHHHHHhhC----CCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHH
Q 044543 573 --GFAGVFP--EHKYEIVRKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSA 644 (962)
Q Consensus 573 --v~arvsP--~qK~~iV~~lq~~----g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~ 644 (962)
-+-.++| ..|..-++.|.+. ...++++||+.||.+||+.|+.|+||+++++..+..||++....+=.++.++
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~~ 253 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAKA 253 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHHH
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHHh
Confidence 1223344 5788888887752 3568999999999999999999999999999999999999987766777765
Q ss_pred H
Q 044543 645 V 645 (962)
Q Consensus 645 i 645 (962)
|
T Consensus 254 i 254 (254)
T PF08282_consen 254 I 254 (254)
T ss_dssp H
T ss_pred C
Confidence 4
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.1e-06 Score=92.13 Aligned_cols=127 Identities=20% Similarity=0.208 Sum_probs=90.6
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.||+.+.++.|+++ +++.++|+-....+..+.+++|+..-. .. .+.... +....+ +.-..|+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f-~~-~~~~~~-~~~i~~------------~~~~~p~ 131 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLF-CH-SLEVDE-DGMITG------------YDLRQPD 131 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhh-cc-eEEECC-CCeEEC------------ccccccc
Confidence 3689999999999999 999999999999999999999985311 10 000000 000000 0012378
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccc-cccCCCchHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDI-VLTEPGLSVIVSAV 645 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDi-vl~~~~~~~i~~~i 645 (962)
.|...++.++..+..+.|+|||.||.+|.++|++|+..+...+.....+++ ++ +++..+...+
T Consensus 132 ~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 195 (205)
T PRK13582 132 GKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAI 195 (205)
T ss_pred hHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHH
Confidence 899999999888889999999999999999999999887544444445665 44 4566665444
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.43 E-value=6.8e-07 Score=106.73 Aligned_cols=52 Identities=21% Similarity=0.374 Sum_probs=48.9
Q ss_pred EEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 595 ICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 595 ~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
.|+++|||.||.+||+.|+.||||++|.+.+|++||+|..+++-.++..+|+
T Consensus 525 eviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 525 EIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 4899999999999999999999999999999999999998888888888876
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=6.4e-07 Score=92.28 Aligned_cols=96 Identities=26% Similarity=0.316 Sum_probs=77.3
Q ss_pred HHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHH
Q 044543 508 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVR 587 (962)
Q Consensus 508 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~ 587 (962)
.+|+.|++.|+++.++||.....+..+++++|+..- |. ..+.|...++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~------------------------------f~--g~~~k~~~l~ 102 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL------------------------------YQ--GQSNKLIAFS 102 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee------------------------------ec--CCCcHHHHHH
Confidence 699999999999999999999999999999997421 11 1133555554
Q ss_pred HHhh-CC---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccC
Q 044543 588 KLQE-RK---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTE 635 (962)
Q Consensus 588 ~lq~-~g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~ 635 (962)
.+.+ .| ..|+|+||+.||.+|++.|+++++++++.+..+..||+++..
T Consensus 103 ~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~ 154 (183)
T PRK09484 103 DLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRI 154 (183)
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecC
Confidence 4433 33 469999999999999999999999998888888899999854
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.6e-06 Score=95.12 Aligned_cols=66 Identities=24% Similarity=0.343 Sum_probs=54.9
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
.|..-++.+.++ | ..|+++||+.||.+|++.|++|++||++.+..++.||++..+++-.++..+|+
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 455555544432 3 35899999999999999999999999999999999999998888888888875
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.34 E-value=1e-06 Score=91.71 Aligned_cols=117 Identities=26% Similarity=0.376 Sum_probs=83.7
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++++++.+.++.|++.|+++.++|+-....+..+.+.+|+.. .+........ .... +.+.+-...|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~-~~~~~~~~~~--~g~~----------~p~~~~~~~~~ 146 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDY-VYSNELVFDE--KGFI----------QPDGIVRVTFD 146 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCe-EEEEEEEEcC--CCeE----------ecceeeEEccc
Confidence 579999999999999999999999999999999999999742 1111111000 0000 00122234567
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhccc
Q 044543 581 HKYEIVRKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASD 630 (962)
Q Consensus 581 qK~~iV~~lq~~----g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaD 630 (962)
.|.++++.+.++ ...+.|+||+.||.+|++.|+++++++.+....+.|+|
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 788787776543 24599999999999999999999999755555666665
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.33 E-value=0.00013 Score=85.94 Aligned_cols=101 Identities=16% Similarity=0.182 Sum_probs=75.1
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
|+++++.+.++++++.|+++.++|+-....+..+++.+|+.+. ++ +.+. ..+..|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~-----Vi-gsd~------------------~~~~kg~ 127 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG-----VF-ASDG------------------TTNLKGA 127 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE-----EE-eCCC------------------ccccCCc
Confidence 4789999999999999999999999999999999999997321 11 1110 1135567
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 626 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~ 626 (962)
.|.+.++..... +-+.++||..||.|+++.|+-.++++.+...++
T Consensus 128 ~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~~ 172 (479)
T PRK08238 128 AKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVGASPGVAR 172 (479)
T ss_pred hHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEECCCHHHHH
Confidence 776654432222 225789999999999999999999985554443
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.33 E-value=3.7e-06 Score=91.51 Aligned_cols=66 Identities=21% Similarity=0.206 Sum_probs=52.4
Q ss_pred hHHHHHHHHhhC------CCEEEEEcCCcCChhhhhcCCeeEEccCch---HHHHhc---ccccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQER------KHICGMTGDGVNDAPALKKADIGIAVADAT---DAARGA---SDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~------g~~v~miGDG~ND~~aLk~AdVGIamg~gt---~~a~~a---aDivl~~~~~~~i~~~i~ 646 (962)
.|..-++.+.+. ...|+++||+.||.+||+.|++||||+++. +..|+. +++|..+++-.++.++++
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 466555555442 456999999999999999999999999887 467875 458887888888888875
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.25 E-value=5.7e-06 Score=87.50 Aligned_cols=135 Identities=16% Similarity=0.107 Sum_probs=87.6
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCccc-ccccchhccCCcchHHHHhhhcceE--E-
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA-LLGQIKDANISALPVDELIEKADGF--A- 575 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~v~--a- 575 (962)
-+++||+.+.++.|++.|+++.++||.....+..+.+.++.....+.... ..+.......+. ...+ .
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~---------~~~~~~~~ 139 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPH---------PCDGTCQN 139 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCC---------CCcccccc
Confidence 35899999999999999999999999999989888888754322211111 111110000000 0000 0
Q ss_pred ecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHH--hcccccccCCCchHHHHHHH
Q 044543 576 GVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR--GASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 576 rvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~--~aaDivl~~~~~~~i~~~i~ 646 (962)
.+ ...|..+++.++.....|.|+|||.||.+|++.||++++-+.-.+-.+ .-+.+.+ ++|..+...+.
T Consensus 140 ~c-g~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 140 QC-GCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred CC-CCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 11 347999999998877889999999999999999999887652112111 1223333 56777766654
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.25 E-value=1.1e-06 Score=90.65 Aligned_cols=92 Identities=23% Similarity=0.310 Sum_probs=70.3
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh-h-
Q 044543 504 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE-H- 581 (962)
Q Consensus 504 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~-q- 581 (962)
+++.+.|+.++++|++++++||+....+..+++.+|++........+... . +.....+++|. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~------~---------~~~~~~~~~~~~~~ 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDN------G---------GGIFTGRITGSNCG 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECT------T---------CCEEEEEEEEEEES
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeec------c---------cceeeeeECCCCCC
Confidence 78889999999999999999999999999999999996421111111000 0 12245666655 4
Q ss_pred -HHHHHHHH------hhCCCEEEEEcCCcCChhhhh
Q 044543 582 -KYEIVRKL------QERKHICGMTGDGVNDAPALK 610 (962)
Q Consensus 582 -K~~iV~~l------q~~g~~v~miGDG~ND~~aLk 610 (962)
|.+.++.+ +.....+.++|||.||.||||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 345789999999999999986
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.24 E-value=1.5e-06 Score=94.54 Aligned_cols=64 Identities=25% Similarity=0.295 Sum_probs=54.4
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHH
Q 044543 581 HKYEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSA 644 (962)
Q Consensus 581 qK~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~ 644 (962)
.|..-++.+.+. | ..++++||+.||.+|++.|+.|++|+++.+.+++.||+++.+++-.++..+
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhh
Confidence 477777777653 2 459999999999999999999999999999999999999988777776654
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.21 E-value=9.7e-06 Score=89.02 Aligned_cols=66 Identities=21% Similarity=0.136 Sum_probs=50.7
Q ss_pred hHHHHHHHHhh-------CCCEEEEEcCCcCChhhhhcCCeeEEccCch-H--H---HHhcccccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQE-------RKHICGMTGDGVNDAPALKKADIGIAVADAT-D--A---ARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~-------~g~~v~miGDG~ND~~aLk~AdVGIamg~gt-~--~---a~~aaDivl~~~~~~~i~~~i~ 646 (962)
.|..-++.|.+ ....|+++|||.||.+||+.|++||||+++. + . .+..+|++....+-.++.++++
T Consensus 187 sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~ 265 (271)
T PRK03669 187 GKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLD 265 (271)
T ss_pred CHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHH
Confidence 56665555544 2346999999999999999999999998444 2 1 3447999998888888888876
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.16 E-value=5e-06 Score=82.76 Aligned_cols=108 Identities=20% Similarity=0.239 Sum_probs=75.5
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccc-cccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSAL-LGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
+-||++|.++.|++.|.+|.++||--..-+..+|.++||+....-...+ .+.. ....+-...+ .-+...
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~--Gk~~gfd~~~--------ptsdsg 158 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKD--GKYLGFDTNE--------PTSDSG 158 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccC--CcccccccCC--------ccccCC
Confidence 5789999999999999999999999999999999999997532211111 1000 0000000000 001124
Q ss_pred hHHHHHHHHhhC--CCEEEEEcCCcCChhhhhcCCeeEEcc
Q 044543 581 HKYEIVRKLQER--KHICGMTGDGVNDAPALKKADIGIAVA 619 (962)
Q Consensus 581 qK~~iV~~lq~~--g~~v~miGDG~ND~~aLk~AdVGIamg 619 (962)
-|.++++.+++. -..++|||||+||.+|+.-||-=|+.+
T Consensus 159 gKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 159 GKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred ccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 799999999884 357899999999999999977666654
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.14 E-value=1.3e-05 Score=85.19 Aligned_cols=130 Identities=18% Similarity=0.308 Sum_probs=83.4
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCC-CCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT-NMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++|++.++++.|++.|+++.++||.....+..+.+.+|+.. +.+........ +....+.. .....+ .+.
T Consensus 85 l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~--~g~~~g~~------~~~~~~--~~~ 154 (224)
T PLN02954 85 LSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGD--SGEYAGFD------ENEPTS--RSG 154 (224)
T ss_pred CCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcC--CCcEECcc------CCCccc--CCc
Confidence 78999999999999999999999999999999999999863 11110000000 00000000 000001 123
Q ss_pred hHHHHHHHHhhC-C-CEEEEEcCCcCChhhhhc--CCeeEEccCc--hHHHHhcccccccCCCchHHHH
Q 044543 581 HKYEIVRKLQER-K-HICGMTGDGVNDAPALKK--ADIGIAVADA--TDAARGASDIVLTEPGLSVIVS 643 (962)
Q Consensus 581 qK~~iV~~lq~~-g-~~v~miGDG~ND~~aLk~--AdVGIamg~g--t~~a~~aaDivl~~~~~~~i~~ 643 (962)
.|.+.++.+.++ | ..+.|+||+.||..|.++ ++++++.+.. .+.....+|+++ +++..+..
T Consensus 155 ~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~ 221 (224)
T PLN02954 155 GKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFV--TDFQDLIE 221 (224)
T ss_pred cHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEE--CCHHHHHH
Confidence 477777776654 2 568899999999999887 5666666532 233345689988 45665554
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.9e-05 Score=86.85 Aligned_cols=66 Identities=29% Similarity=0.352 Sum_probs=52.0
Q ss_pred hHHHHHHHHhh----CC-CEEEEEcCCcCChhhhhcCCeeEEccCchHHHH----hcc-cccc--cCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQE----RK-HICGMTGDGVNDAPALKKADIGIAVADATDAAR----GAS-DIVL--TEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~----~g-~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~----~aa-Divl--~~~~~~~i~~~i~ 646 (962)
.|..-++.+.+ .. ..|+++||+.||.+|++.|++|++|++|.+.+| .+| +.+. ..++-.++..+++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 56655655543 24 789999999999999999999999999999888 666 6776 4555677777774
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.11 E-value=8.2e-06 Score=78.80 Aligned_cols=111 Identities=24% Similarity=0.434 Sum_probs=86.2
Q ss_pred HHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHH
Q 044543 508 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVR 587 (962)
Q Consensus 508 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~ 587 (962)
-.|+.|+++||+|-+|||.+......=|+++||.. +|-. -++|....+
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~------------------------------~~qG--~~dK~~a~~ 89 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH------------------------------LYQG--ISDKLAAFE 89 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce------------------------------eeec--hHhHHHHHH
Confidence 47999999999999999999999999999999842 1111 246776666
Q ss_pred HHhhC----CCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCC----chHHHHHHHHHHH
Q 044543 588 KLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPG----LSVIVSAVLTSRA 650 (962)
Q Consensus 588 ~lq~~----g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~----~~~i~~~i~~gR~ 650 (962)
.|.++ -.-|+++||-.||.|+|++...++|+.++.+-.++.||+|+...+ +..+.++|..++.
T Consensus 90 ~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~ 160 (170)
T COG1778 90 ELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQG 160 (170)
T ss_pred HHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccC
Confidence 65543 346999999999999999999999999999999999999986654 3334444444443
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.03 E-value=1.6e-05 Score=81.87 Aligned_cols=113 Identities=18% Similarity=0.104 Sum_probs=75.1
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEe-cCH
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAG-VFP 579 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar-vsP 579 (962)
++++++.+.++.|++.|+++.++|+........+.+..|+.... ..++........ .+ .+.-...+..+|.. ...
T Consensus 72 ~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~~~~~~~~~-~g-~~~~~~~~~~~~~~~~~g 147 (188)
T TIGR01489 72 PIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF--IEIYSNPASFDN-DG-RHIVWPHHCHGCCSCPCG 147 (188)
T ss_pred CCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe--eEEeccCceECC-CC-cEEEecCCCCccCcCCCC
Confidence 68999999999999999999999999999999999999885321 011111000000 00 00000000001111 112
Q ss_pred hhHHHHHHHHhhC-CCEEEEEcCCcCChhhhhcCCeeEE
Q 044543 580 EHKYEIVRKLQER-KHICGMTGDGVNDAPALKKADIGIA 617 (962)
Q Consensus 580 ~qK~~iV~~lq~~-g~~v~miGDG~ND~~aLk~AdVGIa 617 (962)
..|.++++.++++ ...+.++|||.||..|.++||+-.|
T Consensus 148 ~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 148 CCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 3599999999887 8889999999999999999987544
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.93 E-value=3.9e-05 Score=81.47 Aligned_cols=132 Identities=14% Similarity=0.094 Sum_probs=84.0
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCC--cccccccchhccCCcchHHHHhhhcce--E-E
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP--SSALLGQIKDANISALPVDELIEKADG--F-A 575 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~v--~-a 575 (962)
+++||+.+.++.|++.|+++.++||-....+..+.+.+ +...... .....+.......+. ... + .
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~---------p~~~~~~~ 143 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPH---------PCDEHCQN 143 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccC---------Cccccccc
Confidence 57999999999999999999999999999999999888 6432110 001111100000000 000 0 0
Q ss_pred ecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHH--hcccccccCCCchHHHHHH
Q 044543 576 GVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR--GASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 576 rvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~--~aaDivl~~~~~~~i~~~i 645 (962)
++ ...|..+++.++.....|.|+|||.||.+|.++||+.++-+.-.+.++ .-+.+.+ ++|..+...+
T Consensus 144 ~~-~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 144 HC-GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred cC-CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 00 124888999888777789999999999999999999777432112222 2233333 5576666655
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.91 E-value=1.8e-05 Score=80.74 Aligned_cols=100 Identities=22% Similarity=0.271 Sum_probs=69.7
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhh
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEH 581 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~q 581 (962)
+++++.+.++.+++.|+++.++||.....+..+++.+|+..- +.. .+... .+....+.. ..-....+..
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~-~~~-~~~~~-~~g~~~g~~--------~~~~~~~~~~ 142 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDV-FAN-RLEFD-DNGLLTGPI--------EGQVNPEGEC 142 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchh-eee-eEEEC-CCCEEeCcc--------CCcccCCcch
Confidence 689999999999999999999999999999999999998521 110 01000 000000000 0001245688
Q ss_pred HHHHHHHHhhC----CCEEEEEcCCcCChhhhhcC
Q 044543 582 KYEIVRKLQER----KHICGMTGDGVNDAPALKKA 612 (962)
Q Consensus 582 K~~iV~~lq~~----g~~v~miGDG~ND~~aLk~A 612 (962)
|..+++.++++ ...+.++|||.||.+|++.|
T Consensus 143 K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 143 KGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 99999887654 34589999999999999876
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.83 E-value=4.2e-05 Score=79.88 Aligned_cols=108 Identities=17% Similarity=0.140 Sum_probs=76.3
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCH
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFP 579 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP 579 (962)
.++++++.+.|+.+++.|+++.++||-....+..+++.+|+..- .......+. +....+.. . --.+.+
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~-~~~~l~~~~--~g~~~g~~--------~-~~~~~g 153 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNA-IGTRLEESE--DGIYTGNI--------D-GNNCKG 153 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcce-EecceEEcC--CCEEeCCc--------c-CCCCCC
Confidence 45899999999999999999999999999999999999998531 111111000 00000000 0 012346
Q ss_pred hhHHHHHHHHhh-CC---CEEEEEcCCcCChhhhhcCCeeEEcc
Q 044543 580 EHKYEIVRKLQE-RK---HICGMTGDGVNDAPALKKADIGIAVA 619 (962)
Q Consensus 580 ~qK~~iV~~lq~-~g---~~v~miGDG~ND~~aLk~AdVGIamg 619 (962)
+.|...++.+.+ .+ ..+.++||+.||.||++.|+.++++.
T Consensus 154 ~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 154 EGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred hHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 788887876654 33 26889999999999999999999886
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=8e-05 Score=79.11 Aligned_cols=125 Identities=17% Similarity=0.157 Sum_probs=88.2
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecC-
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVF- 578 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvs- 578 (962)
.++.||+.+.++.|++.|+++.++||........+.+++|+.... ..++.+.. +.+..
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~-------------------~~~~kp 150 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF--SVVIGGDS-------------------LPNKKP 150 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc--cEEEcCCC-------------------CCCCCc
Confidence 357899999999999999999999999999999999999985321 11111100 11112
Q ss_pred -HhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEccC----chHHHHhcccccccCCCchHHHHHHHH
Q 044543 579 -PEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARGASDIVLTEPGLSVIVSAVLT 647 (962)
Q Consensus 579 -P~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIamg~----gt~~a~~aaDivl~~~~~~~i~~~i~~ 647 (962)
|+--..+.+.++.....+.++||+.||+.|.++|++ +|++.. ..+.....+|+++ +++..+...+.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 151 DPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred ChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 332234445554455679999999999999999999 666632 2344455788888 778888877754
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00012 Score=78.51 Aligned_cols=66 Identities=21% Similarity=0.241 Sum_probs=55.3
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhccc----ccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASD----IVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaD----ivl~~~~~~~i~~~i~ 646 (962)
.|...++.+.++ | ..|+++||+.||.+|++.|+.||+|+++.+..++.|| +|...++-.++.++|.
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 677777777653 3 2488999999999999999999999999999999999 7776666677887775
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.71 E-value=8.2e-05 Score=71.33 Aligned_cols=118 Identities=14% Similarity=0.052 Sum_probs=77.7
Q ss_pred ecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEe
Q 044543 497 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAG 576 (962)
Q Consensus 497 ~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar 576 (962)
.-..++++++.+.+++|++.|++++++||.....+....+++|+... ...++........ ..............+.+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~ 96 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDY--FDPVITSNGAAIY-YPKEGLFLGGGPFDIGK 96 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchh--hhheeccchhhhh-cccccccccccccccCC
Confidence 34458999999999999999999999999999999999999987321 1111110000000 00000000111123445
Q ss_pred cCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhc-CCeeEE
Q 044543 577 VFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKK-ADIGIA 617 (962)
Q Consensus 577 vsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~-AdVGIa 617 (962)
-.|+.+..+.+.+......+.++||+.||..|++. ..-+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 97 PNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 56777777777776666789999999999999998 444554
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00021 Score=75.98 Aligned_cols=126 Identities=18% Similarity=0.183 Sum_probs=91.9
Q ss_pred CCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecC
Q 044543 499 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVF 578 (962)
Q Consensus 499 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvs 578 (962)
..++=++++++++.|+++|++..++|++....+..+.+..|+..-.. .+.|.... -...-.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~---~i~g~~~~----------------~~~KP~ 147 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFD---VIVGGDDV----------------PPPKPD 147 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccc---eEEcCCCC----------------CCCCcC
Confidence 44678999999999999999999999999999999999999865321 11110000 011124
Q ss_pred HhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCC---eeEEccC--chHHHHhcccccccCCCchHHHHHH
Q 044543 579 PEHKYEIVRKLQERKHICGMTGDGVNDAPALKKAD---IGIAVAD--ATDAARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 579 P~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~Ad---VGIamg~--gt~~a~~aaDivl~~~~~~~i~~~i 645 (962)
|+....+.+.+....+.++||||..+|..|=|+|+ ||+..|. ........+|+++ +++..+...+
T Consensus 148 P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l 217 (220)
T COG0546 148 PEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALL 217 (220)
T ss_pred HHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHH
Confidence 66666666666655447999999999999999998 5666663 4566776799999 6677766554
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00026 Score=74.23 Aligned_cols=124 Identities=19% Similarity=0.138 Sum_probs=83.7
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+|+.+++++|++.|+++.++||.....+...-+..|+.... . .++.... ....+-.|+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f-~-~i~~~~~-----------------~~~~KP~~~ 135 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF-D-HVIGSDE-----------------VPRPKPAPD 135 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe-e-eEEecCc-----------------CCCCCCChH
Confidence 57899999999999999999999999998888888889885311 0 1110000 001122233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeE-Ec--c--CchHHHHhcccccccCCCchHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGI-AV--A--DATDAARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGI-am--g--~gt~~a~~aaDivl~~~~~~~i~~~i 645 (962)
-=..+++.++-....|+|+||+.+|..+-++|++.. ++ | +..+..+..+|+++ +++..+...+
T Consensus 136 ~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 136 IVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 334444445444567999999999999999999953 33 3 23344566799988 5566665543
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00036 Score=74.34 Aligned_cols=43 Identities=14% Similarity=0.159 Sum_probs=38.6
Q ss_pred CCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCC
Q 044543 499 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 541 (962)
Q Consensus 499 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~ 541 (962)
.+..-+++.++|++|++.|++++++||.....+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4455667999999999999999999999999999999999984
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00033 Score=75.85 Aligned_cols=147 Identities=16% Similarity=0.161 Sum_probs=95.2
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCC----Ccccc-ccc-c-hhc---------------
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY----PSSAL-LGQ-I-KDA--------------- 557 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~----~~~~l-~~~-~-~~~--------------- 557 (962)
.+..+...++|+++++.|+.++.+||........+.+++++....+ ....+ .+. . .+.
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 4567899999999999999999999999999999999999754310 00000 000 0 000
Q ss_pred --------c-----------------CCcch----H---HHHhhhc--ce---EE-----ecCH--hhHHHHHHHHhhC-
Q 044543 558 --------N-----------------ISALP----V---DELIEKA--DG---FA-----GVFP--EHKYEIVRKLQER- 592 (962)
Q Consensus 558 --------~-----------------~~~~~----~---~~~~~~~--~v---~a-----rvsP--~qK~~iV~~lq~~- 592 (962)
. ...+. + .+.+... .+ ++ .+.| ..|..-++.+.+.
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 0 00001 1 1111111 11 11 2344 4688888887663
Q ss_pred ---CCEEEEEcCCcCChhhhhc-CCeeEEccCchHHHHhccc-------ccccCCCchHHHHHHH
Q 044543 593 ---KHICGMTGDGVNDAPALKK-ADIGIAVADATDAARGASD-------IVLTEPGLSVIVSAVL 646 (962)
Q Consensus 593 ---g~~v~miGDG~ND~~aLk~-AdVGIamg~gt~~a~~aaD-------ivl~~~~~~~i~~~i~ 646 (962)
...|+++||+.||.+|++. ++.||+|+++.+..++.+| ++.....-+++.++++
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3569999999999999998 6799999999988886543 5444445566666664
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00068 Score=74.49 Aligned_cols=125 Identities=14% Similarity=0.147 Sum_probs=80.9
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCH
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFP 579 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP 579 (962)
.++.+++.++++.|++.|+++.++||-....+..+..+.|+.... + .++.+.... ...-.|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f-~-~i~~~d~~~-----------------~~Kp~p 160 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF-R-WIIGGDTLP-----------------QKKPDP 160 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC-e-EEEecCCCC-----------------CCCCCc
Confidence 368899999999999999999999999998888888888874321 0 111110000 001111
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEc--c--CchHHHHhcccccccCCCchHHHHHH
Q 044543 580 EHKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAV--A--DATDAARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 580 ~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIam--g--~gt~~a~~aaDivl~~~~~~~i~~~i 645 (962)
+-=..+.+.+.-....|+|+||+.||+.|.++|++ .+++ | ...+..+..+|+++ +++..+..++
T Consensus 161 ~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~ 229 (272)
T PRK13223 161 AALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGC 229 (272)
T ss_pred HHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHH
Confidence 11122333332234569999999999999999998 4555 3 22333455789988 5576666543
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0018 Score=68.74 Aligned_cols=38 Identities=21% Similarity=0.253 Sum_probs=35.6
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCC
Q 044543 504 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 541 (962)
Q Consensus 504 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~ 541 (962)
+.+.++|++|+++|+++.++||.....+..+.+.+|+.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 44899999999999999999999999999999999985
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.00088 Score=70.68 Aligned_cols=123 Identities=17% Similarity=0.122 Sum_probs=81.9
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhh
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEH 581 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~q 581 (962)
+.||+.+.++.|++.|+++.++||.....+..+-+..|+.... ..++...... ...-.|+-
T Consensus 83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~-----------------~~Kp~p~~ 143 (214)
T PRK13288 83 EYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF--DVVITLDDVE-----------------HAKPDPEP 143 (214)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce--eEEEecCcCC-----------------CCCCCcHH
Confidence 6899999999999999999999999999999999999985321 1111110000 01112333
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEc--cC-c-hHHHHhcccccccCCCchHHHHHH
Q 044543 582 KYEIVRKLQERKHICGMTGDGVNDAPALKKADIG-IAV--AD-A-TDAARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 582 K~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG-Iam--g~-g-t~~a~~aaDivl~~~~~~~i~~~i 645 (962)
-..+.+.+.-....++|+||..+|..|-++|++- |++ |. . .+.....+|+++ +++..+...+
T Consensus 144 ~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 144 VLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 3344444443445689999999999999999983 333 32 2 233445688887 5677776654
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0017 Score=75.53 Aligned_cols=142 Identities=18% Similarity=0.152 Sum_probs=88.7
Q ss_pred cHHHHH-HHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCC----cc-cccccc------------------------
Q 044543 505 DSAETI-RRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP----SS-ALLGQI------------------------ 554 (962)
Q Consensus 505 ~~~~~I-~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~----~~-~l~~~~------------------------ 554 (962)
...+++ +++++.|+..+..||..+.....+.++.++....+. .. +..+..
T Consensus 32 ~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~ 111 (413)
T PLN02382 32 LRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEET 111 (413)
T ss_pred HHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHH
Confidence 345555 889999999999999999999999999998654210 00 000000
Q ss_pred --h-----hcc-----------CCcch-------HHHHhhh----cc------eEEecCHh--hHHHHHHHHhhC----C
Q 044543 555 --K-----DAN-----------ISALP-------VDELIEK----AD------GFAGVFPE--HKYEIVRKLQER----K 593 (962)
Q Consensus 555 --~-----~~~-----------~~~~~-------~~~~~~~----~~------v~arvsP~--qK~~iV~~lq~~----g 593 (962)
. ... .+... +.+.+.+ .. -+-.+.|. .|..-++.|.++ |
T Consensus 112 ~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~g 191 (413)
T PLN02382 112 SKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEG 191 (413)
T ss_pred hcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcC
Confidence 0 000 00001 1111111 11 12345554 488888888664 3
Q ss_pred ---CEEEEEcCCcCChhhhhcCC-eeEEccCchHHHHhcc--------ccccc-CCCchHHHHHHH
Q 044543 594 ---HICGMTGDGVNDAPALKKAD-IGIAVADATDAARGAS--------DIVLT-EPGLSVIVSAVL 646 (962)
Q Consensus 594 ---~~v~miGDG~ND~~aLk~Ad-VGIamg~gt~~a~~aa--------Divl~-~~~~~~i~~~i~ 646 (962)
..|+++||+.||.+||+.|+ .||+|+++.+..++.+ |++.. +++-.+|.+++.
T Consensus 192 i~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~ 257 (413)
T PLN02382 192 KAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIG 257 (413)
T ss_pred CChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHH
Confidence 37899999999999999999 6999999999888643 33433 334455666654
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.00093 Score=70.25 Aligned_cols=122 Identities=13% Similarity=0.101 Sum_probs=78.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+|+.++++.|++.|+++.++|+-....+..+.++.|+.... . .++.+.... ...-.|+
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-~-~~~~~~~~~-----------------~~Kp~p~ 145 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF-S-VLIGGDSLA-----------------QRKPHPD 145 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC-c-EEEecCCCC-----------------CCCCChH
Confidence 47899999999999999999999999999999999999985321 1 111110000 0011122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEE-c--cCc--hHHHHhcccccccCCCchHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIA-V--ADA--TDAARGASDIVLTEPGLSVIVS 643 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIa-m--g~g--t~~a~~aaDivl~~~~~~~i~~ 643 (962)
-=..+.+.+.-....++|+||..||..|.++|++-.. + |.+ .......+|+++ +++..+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~~ 211 (213)
T TIGR01449 146 PLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELPP 211 (213)
T ss_pred HHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHHh
Confidence 2223333333334569999999999999999998543 4 322 122334688887 55655543
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0023 Score=70.07 Aligned_cols=139 Identities=12% Similarity=0.111 Sum_probs=85.2
Q ss_pred CCCccHHHHHHHHHh-CCCcEEEEcCCCHHHHHHHHHHhCCC--C-C---CC--Ccc----ccc----------------
Q 044543 501 PPRHDSAETIRRALN-LGVNVKMITGDQLAIAKETGRRLGMG--T-N---MY--PSS----ALL---------------- 551 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~-aGI~v~miTGD~~~tA~~ia~~~Gi~--~-~---~~--~~~----~l~---------------- 551 (962)
.+-+++.++|++|++ .|+.++++||..........+.+++. . + .. ... .+.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 345789999999998 79999999999999998888766642 1 0 00 000 000
Q ss_pred ---ccchh----------ccCC--cchHHHHh----hhcc--------eEEecCH--hhHHHHHHHHhhC----CCEEEE
Q 044543 552 ---GQIKD----------ANIS--ALPVDELI----EKAD--------GFAGVFP--EHKYEIVRKLQER----KHICGM 598 (962)
Q Consensus 552 ---~~~~~----------~~~~--~~~~~~~~----~~~~--------v~arvsP--~qK~~iV~~lq~~----g~~v~m 598 (962)
|...+ ...+ .+.+.++. +... .+-.+.| .+|..-|+.+.+. ...+.+
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 00000 0001 01111111 1111 1223344 3788888776553 356899
Q ss_pred EcCCcCChhhhhcC----CeeEEccCchHHHHhcccccccCCCchHHHHHH
Q 044543 599 TGDGVNDAPALKKA----DIGIAVADATDAARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 599 iGDG~ND~~aLk~A----dVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i 645 (962)
+||+.||.+|++.+ +.||+||++. ..|++.|. +...+...+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l~--~~~~v~~~L 240 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRLA--GVPDVWSWL 240 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeCC--CHHHHHHHH
Confidence 99999999999999 9999999765 35778874 444554444
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0021 Score=68.27 Aligned_cols=118 Identities=14% Similarity=0.159 Sum_probs=76.4
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.||+.++++.|++.|+++.++|+........+.+++|+..-.. .++.+... ....-.|+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~--~~~~~~~~-----------------~~~Kp~~~ 152 (222)
T PRK10826 92 PLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFD--ALASAEKL-----------------PYSKPHPE 152 (222)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhccc--EEEEcccC-----------------CCCCCCHH
Confidence 578999999999999999999999999999999999999754321 11111000 01111222
Q ss_pred hHHHHHHHHhhC---CCEEEEEcCCcCChhhhhcCCeeEEc-cC---chHHHHhcccccccCCCchHHH
Q 044543 581 HKYEIVRKLQER---KHICGMTGDGVNDAPALKKADIGIAV-AD---ATDAARGASDIVLTEPGLSVIV 642 (962)
Q Consensus 581 qK~~iV~~lq~~---g~~v~miGDG~ND~~aLk~AdVGIam-g~---gt~~a~~aaDivl~~~~~~~i~ 642 (962)
-+-+.+++. ...|+|+||..||+.+-++|++.... .. ..+.-...+|+++ .++..+.
T Consensus 153 ---~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~dl~ 216 (222)
T PRK10826 153 ---VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL--ESLTELT 216 (222)
T ss_pred ---HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec--cCHHHHh
Confidence 222333333 34589999999999999999985443 32 2222223577777 4455543
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0022 Score=68.48 Aligned_cols=124 Identities=14% Similarity=0.107 Sum_probs=81.9
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.||+.+.++.|++.|+++.++|+.+...+..+-++.|+.... . .++.+... ....-.|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f-~-~i~~~~~~-----------------~~~KP~p~ 155 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC-A-VLIGGDTL-----------------AERKPHPL 155 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc-c-EEEecCcC-----------------CCCCCCHH
Confidence 47899999999999999999999999988888888888875321 1 11111100 01122233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEc--cCc--h-HHHHhcccccccCCCchHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG-IAV--ADA--T-DAARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG-Iam--g~g--t-~~a~~aaDivl~~~~~~~i~~~i 645 (962)
-=..+.+.+.-....++|+||+.||..|-++|++- |++ |.. . ...+..+|+++ +++..+...+
T Consensus 156 ~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~~ 224 (229)
T PRK13226 156 PLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNPA 224 (229)
T ss_pred HHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHHh
Confidence 33345555554456799999999999999999985 344 321 1 12234689988 5566665543
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.005 Score=67.63 Aligned_cols=121 Identities=13% Similarity=0.085 Sum_probs=79.8
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++-||+.++++.|++.|+++.++|+.....+..+-+.+|+..... .++.+.. +. ..|+
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~--~vi~~~~------------------~~--~k~~ 199 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFS--VVQAGTP------------------IL--SKRR 199 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheE--EEEecCC------------------CC--CCHH
Confidence 468999999999999999999999999999999999999854211 1111100 00 0121
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEccCc--h--HHHHhcccccccCCCchHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG-IAVADA--T--DAARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG-Iamg~g--t--~~a~~aaDivl~~~~~~~i~~~i 645 (962)
-=..+++.++-....|+||||+.+|+.|-++|++- |++..| + +.....+|+++ +++..+...+
T Consensus 200 ~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 200 ALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 11122222222345699999999999999999984 333222 2 23344689988 6677776654
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0037 Score=67.84 Aligned_cols=100 Identities=14% Similarity=0.078 Sum_probs=66.8
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.||+.+.++.|++.|+++.++||.....+..+-+++|+..... ..++.+.... ...-.|+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~-d~ii~~~~~~-----------------~~KP~p~ 160 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP-DYNVTTDDVP-----------------AGRPAPW 160 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC-ceEEccccCC-----------------CCCCCHH
Confidence 367999999999999999999999999999999888888754211 1112111100 1111233
Q ss_pred hHHHHHHHHhhC-CCEEEEEcCCcCChhhhhcCCe-eEEc
Q 044543 581 HKYEIVRKLQER-KHICGMTGDGVNDAPALKKADI-GIAV 618 (962)
Q Consensus 581 qK~~iV~~lq~~-g~~v~miGDG~ND~~aLk~AdV-GIam 618 (962)
-=....+.+.-. ...|+||||..+|+.|-++|++ .|++
T Consensus 161 ~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v 200 (253)
T TIGR01422 161 MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGL 200 (253)
T ss_pred HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEE
Confidence 222333333321 3459999999999999999997 3444
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0041 Score=65.78 Aligned_cols=124 Identities=17% Similarity=0.145 Sum_probs=79.3
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCC-CCCCcccccccchhccCCcchHHHHhhhcceEEecC
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT-NMYPSSALLGQIKDANISALPVDELIEKADGFAGVF 578 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvs 578 (962)
.++.+|+.+.++.|++.|+++.++|+-....+..+-+.+|+.. +..+ .++...... ..+-.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~-~i~~~~~~~-----------------~~KP~ 147 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVD-AVVCPSDVA-----------------AGRPA 147 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCC-EEEcCCcCC-----------------CCCCC
Confidence 3689999999999999999999999999999999999999851 1111 111111100 01112
Q ss_pred HhhHHHHHHHHhhC-CCEEEEEcCCcCChhhhhcCCeeE--EccCc---h-HHHHhcccccccCCCchHHHH
Q 044543 579 PEHKYEIVRKLQER-KHICGMTGDGVNDAPALKKADIGI--AVADA---T-DAARGASDIVLTEPGLSVIVS 643 (962)
Q Consensus 579 P~qK~~iV~~lq~~-g~~v~miGDG~ND~~aLk~AdVGI--amg~g---t-~~a~~aaDivl~~~~~~~i~~ 643 (962)
|+-=....+.+.-. ...++|+||+.+|+.|-++|++.. ++..| . +.....+|.++ +++..+..
T Consensus 148 p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~ 217 (220)
T TIGR03351 148 PDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPA 217 (220)
T ss_pred HHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHH
Confidence 22212223333222 256999999999999999999976 34222 1 22234577777 45555544
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0088 Score=65.13 Aligned_cols=133 Identities=12% Similarity=0.111 Sum_probs=83.8
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEe---
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAG--- 576 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar--- 576 (962)
-++|||+.+.++.|++.|+++.++||=....+..+.+++|+..... .++ .....-..+ .+...
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~--~Iv-SN~L~f~~d-----------GvltG~~~ 185 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNV--KVV-SNFMDFDED-----------GVLKGFKG 185 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCc--eEE-eeeEEECCC-----------CeEeCCCC
Confidence 3579999999999999999999999999999999999999853211 110 000000000 00101
Q ss_pred --cCHhhHHHHHHH-----Hh--hCCCEEEEEcCCcCChhhhhcC---CeeEEcc--C-c----hHHHHhcccccccCCC
Q 044543 577 --VFPEHKYEIVRK-----LQ--ERKHICGMTGDGVNDAPALKKA---DIGIAVA--D-A----TDAARGASDIVLTEPG 637 (962)
Q Consensus 577 --vsP~qK~~iV~~-----lq--~~g~~v~miGDG~ND~~aLk~A---dVGIamg--~-g----t~~a~~aaDivl~~~~ 637 (962)
+....|.+.+.. ++ .....|.++|||.||++|..-. +--+.+| + - .+.=+++=||||.+|.
T Consensus 186 P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~ 265 (277)
T TIGR01544 186 PLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDE 265 (277)
T ss_pred CcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCC
Confidence 001345554432 22 2235688999999999996544 2233333 2 1 3345678899999998
Q ss_pred chHHHHHHH
Q 044543 638 LSVIVSAVL 646 (962)
Q Consensus 638 ~~~i~~~i~ 646 (962)
=..++.+|.
T Consensus 266 t~~v~~~il 274 (277)
T TIGR01544 266 TLEVANSIL 274 (277)
T ss_pred CchHHHHHH
Confidence 777776664
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.011 Score=64.54 Aligned_cols=43 Identities=7% Similarity=-0.014 Sum_probs=38.6
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCC
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT 542 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~ 542 (962)
+..-+.+.++|++|++.||.|++.||........+.+++|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 3456779999999999999999999999999999999999853
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0061 Score=64.31 Aligned_cols=108 Identities=12% Similarity=0.032 Sum_probs=74.9
Q ss_pred CCCccHHHHH-HHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCH
Q 044543 501 PPRHDSAETI-RRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFP 579 (962)
Q Consensus 501 ~lr~~~~~~I-~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP 579 (962)
++.|++.++| +.+++.|+++.++|+-....+..+++.+|+.. ...+.+...+...++. . .-..|.-
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~----~~~~i~t~l~~~~tg~--------~-~g~~c~g 161 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP----RVNLIASQMQRRYGGW--------V-LTLRCLG 161 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc----cCceEEEEEEEEEccE--------E-CCccCCC
Confidence 3589999999 57888999999999999999999999999621 0011122111100000 0 0123566
Q ss_pred hhHHHHHHHH-hhCCCEEEEEcCCcCChhhhhcCCeeEEccCc
Q 044543 580 EHKYEIVRKL-QERKHICGMTGDGVNDAPALKKADIGIAVADA 621 (962)
Q Consensus 580 ~qK~~iV~~l-q~~g~~v~miGDG~ND~~aLk~AdVGIamg~g 621 (962)
++|..-++.. .......-+=||..||.|||+.|+-.++++..
T Consensus 162 ~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~ 204 (211)
T PRK11590 162 HEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTPR 204 (211)
T ss_pred hHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECcc
Confidence 8888877654 33344566889999999999999999999743
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.01 Score=65.02 Aligned_cols=93 Identities=13% Similarity=0.042 Sum_probs=62.4
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++-||+.++++.|++.|+++.++||.....+..+-+..|+..-.. ..++.+.. .....|
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~-d~i~~~~~-------------------~~~~KP- 159 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP-DHVVTTDD-------------------VPAGRP- 159 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc-eEEEcCCc-------------------CCCCCC-
Confidence 467899999999999999999999999988877777777643211 11111110 001112
Q ss_pred hHHHHHHHHhhCC----CEEEEEcCCcCChhhhhcCCe
Q 044543 581 HKYEIVRKLQERK----HICGMTGDGVNDAPALKKADI 614 (962)
Q Consensus 581 qK~~iV~~lq~~g----~~v~miGDG~ND~~aLk~AdV 614 (962)
+..-+.+.+++.| ..++||||..+|+.|-++|++
T Consensus 160 ~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 160 YPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred ChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 1122333444332 469999999999999999997
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0099 Score=71.62 Aligned_cols=48 Identities=10% Similarity=0.079 Sum_probs=39.5
Q ss_pred EEeecCCC-CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCC
Q 044543 494 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 541 (962)
Q Consensus 494 G~i~i~D~-lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~ 541 (962)
|.+.-.|. .-+.+.++|++|+++|+.+++.||.....+..+.+++|+.
T Consensus 425 GTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 425 GTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 44443333 3457899999999999999999999999999999999974
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0028 Score=66.03 Aligned_cols=94 Identities=18% Similarity=0.100 Sum_probs=66.9
Q ss_pred CCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecC
Q 044543 499 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVF 578 (962)
Q Consensus 499 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvs 578 (962)
.+++.++++++++.|++.|+++.++||-....+..+-+.+|+..-. ..++.+. ++..+-.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~~~~~~------------------~~~~KP~ 163 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF--PVQIWME------------------DCPPKPN 163 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC--CEEEeec------------------CCCCCcC
Confidence 4556778899999999999999999999999999999999985321 1111110 1111334
Q ss_pred HhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcC
Q 044543 579 PEHKYEIVRKLQERKHICGMTGDGVNDAPALKKA 612 (962)
Q Consensus 579 P~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~A 612 (962)
|+--..+.+.+.-....|+||||+.+|+.|-++|
T Consensus 164 p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 164 PEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 5544555566555556799999999999887654
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.01 Score=64.63 Aligned_cols=120 Identities=16% Similarity=0.096 Sum_probs=77.9
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+|+.+.++.|++.|+++.++|+-....+..+-+.+|+.... ..++.+.... ...-.|+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~ii~~~d~~-----------------~~KP~Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFF--SVVLAAEDVY-----------------RGKPDPE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhC--cEEEecccCC-----------------CCCCCHH
Confidence 46899999999999999999999999999999999999985321 1122111110 0111222
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEc-cCchHHHHhcccccccCCCchHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG-IAV-ADATDAARGASDIVLTEPGLSVI 641 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG-Iam-g~gt~~a~~aaDivl~~~~~~~i 641 (962)
-=....+.+.-....++|+||..+|+.|-++|++- |++ |.........+|+++ ++++.+
T Consensus 170 ~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi--~~~~el 230 (260)
T PLN03243 170 MFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVV--RRLDDL 230 (260)
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEe--CCHHHH
Confidence 22233444443445699999999999999999983 344 322222233578877 445444
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.01 Score=61.98 Aligned_cols=39 Identities=31% Similarity=0.392 Sum_probs=35.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhC
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLG 539 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~G 539 (962)
++.+++.++|++|++.|+++.++||.....+..+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 477899999999999999999999999999999988754
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.0095 Score=62.79 Aligned_cols=107 Identities=11% Similarity=0.021 Sum_probs=73.9
Q ss_pred CCCccHHHHHH-HHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCH
Q 044543 501 PPRHDSAETIR-RALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFP 579 (962)
Q Consensus 501 ~lr~~~~~~I~-~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP 579 (962)
.++|++.++|+ .+++.|++++++|+=....+..+++..++... ..++ +...+.. ++-. + .=..|.-
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~---~~~i-~t~le~~-~gg~----~----~g~~c~g 160 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR---LNLI-ASQIERG-NGGW----V----LPLRCLG 160 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc---CcEE-EEEeEEe-CCce----E----cCccCCC
Confidence 46899999996 78889999999999999999999998655221 0111 2221110 0000 0 0123566
Q ss_pred hhHHHHHHHH-hhCCCEEEEEcCCcCChhhhhcCCeeEEccC
Q 044543 580 EHKYEIVRKL-QERKHICGMTGDGVNDAPALKKADIGIAVAD 620 (962)
Q Consensus 580 ~qK~~iV~~l-q~~g~~v~miGDG~ND~~aLk~AdVGIamg~ 620 (962)
++|..-++.. ......+-+=||..||.|||+.||-.+++..
T Consensus 161 ~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 161 HEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred hHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 8898877644 3233456689999999999999999999963
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.008 Score=71.19 Aligned_cols=123 Identities=12% Similarity=0.088 Sum_probs=81.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
+|.||+.+.++.|++.|+++.++|+-....+..+-+.+|+.... ..++.+.... ..-.|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f--~~i~~~d~v~------------------~~~kP~ 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV--TETFSIEQIN------------------SLNKSD 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc--ceeEecCCCC------------------CCCCcH
Confidence 57899999999999999999999999999999999999985321 1111111100 011232
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEcc--CchHHHHhcccccccCCCchHHHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAVA--DATDAARGASDIVLTEPGLSVIVSAVLT 647 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIamg--~gt~~a~~aaDivl~~~~~~~i~~~i~~ 647 (962)
-=....+.++ ...+.|+||..+|+.|-++|++ .|++. .+.+.....+|+++ +++..+...+..
T Consensus 390 ~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~ 455 (459)
T PRK06698 390 LVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILST 455 (459)
T ss_pred HHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHH
Confidence 1112222221 3469999999999999999998 45553 22222234588888 567777776643
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.015 Score=62.90 Aligned_cols=116 Identities=13% Similarity=0.126 Sum_probs=77.4
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.||+.++++.|++.|+++.++|+-....+...-+.+|+.... ..++.+.... ...-.|+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~iv~~~~~~-----------------~~KP~p~ 168 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF--QAVIIGSECE-----------------HAKPHPD 168 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC--cEEEecCcCC-----------------CCCCChH
Confidence 46889999999999999999999999999999999999985321 1122111110 1112233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEccCc---hHHHHhcccccccC
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG-IAVADA---TDAARGASDIVLTE 635 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG-Iamg~g---t~~a~~aaDivl~~ 635 (962)
-=....+.++-....++|+||..+|+.|-++|++- |++..| .+.....+|+++.+
T Consensus 169 ~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~ 227 (248)
T PLN02770 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD 227 (248)
T ss_pred HHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc
Confidence 33344444444456699999999999999999984 334222 22223468888844
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.024 Score=58.22 Aligned_cols=144 Identities=19% Similarity=0.246 Sum_probs=94.4
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccc-------cccchhc------cCCcchHHHHh
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSAL-------LGQIKDA------NISALPVDELI 568 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l-------~~~~~~~------~~~~~~~~~~~ 568 (962)
+-||+.+|.+.|++. ...+++|---.+-+.++|..+|++........+ ...+-.+ ..+..+-+++.
T Consensus 84 lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geelf 162 (315)
T COG4030 84 LVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEELF 162 (315)
T ss_pred cCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHHH
Confidence 568999999999876 456667777778899999999996432211111 0000000 01111112222
Q ss_pred hhc-ceEEecCHhhHHHHHHHHhhC------------------CCEEEEEcCCcCChhhhhcCCe--eEEcc-CchHHHH
Q 044543 569 EKA-DGFAGVFPEHKYEIVRKLQER------------------KHICGMTGDGVNDAPALKKADI--GIAVA-DATDAAR 626 (962)
Q Consensus 569 ~~~-~v~arvsP~qK~~iV~~lq~~------------------g~~v~miGDG~ND~~aLk~AdV--GIamg-~gt~~a~ 626 (962)
++. ++|.|..|.+-.+|++..+.- ....+++||.+.|+.||+.+.= |+|++ +|.+-|.
T Consensus 163 e~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeYal 242 (315)
T COG4030 163 EKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEYAL 242 (315)
T ss_pred HHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCcccc
Confidence 222 258888887655555444431 2346789999999999998853 58887 8888888
Q ss_pred hcccccccCCCchHHHHHHH
Q 044543 627 GASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 627 ~aaDivl~~~~~~~i~~~i~ 646 (962)
.-||+.+..++.+.....|.
T Consensus 243 ~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 243 KEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred cccceEEeccchhhhhHHHH
Confidence 89999999999888877775
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.016 Score=61.41 Aligned_cols=114 Identities=14% Similarity=0.110 Sum_probs=71.7
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.||+.++++.|++.|+++.++|+.....+...-+..|+... ..++.+.... ...-.|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~---~~i~~~~~~~-----------------~~KP~p~ 142 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP---EVFVTAERVK-----------------RGKPEPD 142 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc---cEEEEHHHhc-----------------CCCCCcH
Confidence 4789999999999999999999999887766666666776321 1111111000 0111122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEccCch-HHHHhccccccc
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAVADAT-DAARGASDIVLT 634 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIamg~gt-~~a~~aaDivl~ 634 (962)
-=....+.+.-....++|+||..+|+.|-++|++ .|++..+. ......+|+++.
T Consensus 143 ~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 143 AYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLH 198 (218)
T ss_pred HHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEec
Confidence 2223333333344679999999999999999998 46664322 223345777763
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.015 Score=59.37 Aligned_cols=123 Identities=13% Similarity=0.026 Sum_probs=69.9
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHH--------HHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcce
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLA--------IAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADG 573 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~--------tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v 573 (962)
+-||+++++++|++.|+++.++|+.... .....-+..|+..- +......+... -
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~-~~~~~~~~~~~-----------------~ 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDI-YLCPHKHGDGC-----------------E 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEE-EECcCCCCCCC-----------------C
Confidence 6799999999999999999999987531 12222334454210 00000000000 0
Q ss_pred EEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEcc--CchH--------HHHhcccccccCCCchHHH
Q 044543 574 FAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAVA--DATD--------AARGASDIVLTEPGLSVIV 642 (962)
Q Consensus 574 ~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIamg--~gt~--------~a~~aaDivl~~~~~~~i~ 642 (962)
...-.|+-=..+.+.+.-.-+.+.||||..+|+.|-++|++ +|++. .+.+ .....+|+++ +++..+.
T Consensus 91 ~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~--~~~~el~ 168 (173)
T PRK06769 91 CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIA--ENFEDAV 168 (173)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchh--hCHHHHH
Confidence 11222333334444444344569999999999999999998 44443 2332 1123466776 4455555
Q ss_pred HH
Q 044543 643 SA 644 (962)
Q Consensus 643 ~~ 644 (962)
..
T Consensus 169 ~~ 170 (173)
T PRK06769 169 NW 170 (173)
T ss_pred HH
Confidence 43
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.0081 Score=64.30 Aligned_cols=91 Identities=21% Similarity=0.241 Sum_probs=62.9
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCC----CHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEec
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGD----QLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGV 577 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD----~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arv 577 (962)
+.+++.+.++.+++.|+++.++|+- ...++..+.+.+|+.... ..++.++... .-
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f--~~i~~~d~~~-------------------~~ 173 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN--PVIFAGDKPG-------------------QY 173 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe--eEEECCCCCC-------------------CC
Confidence 4556999999999999999999997 667999999999995311 1111111100 00
Q ss_pred CHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEc
Q 044543 578 FPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAV 618 (962)
Q Consensus 578 sP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIam 618 (962)
.| +|. ..+++.| +++|+||..||..+-++|++ +|++
T Consensus 174 Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~~I~V 210 (237)
T TIGR01672 174 QY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCCEEEE
Confidence 12 232 2445555 47899999999999999987 4555
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.0097 Score=63.67 Aligned_cols=92 Identities=21% Similarity=0.256 Sum_probs=64.8
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCC----CHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEe
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGD----QLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAG 576 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD----~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar 576 (962)
.|.+++.+.++.+++.|+++.++||. ...|+..+.+..|++.+.+-...+.|..
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~---------------------- 171 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDK---------------------- 171 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCC----------------------
Confidence 36788999999999999999999995 4669999999999953221111221110
Q ss_pred cCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEc
Q 044543 577 VFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAV 618 (962)
Q Consensus 577 vsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIam 618 (962)
..-.+|.. .+++.| .++|+||..+|..+-++|++ +|++
T Consensus 172 ~~K~~K~~---~l~~~~-i~I~IGDs~~Di~aA~~AGi~~I~v 210 (237)
T PRK11009 172 PGQYTKTQ---WLKKKN-IRIFYGDSDNDITAAREAGARGIRI 210 (237)
T ss_pred CCCCCHHH---HHHhcC-CeEEEcCCHHHHHHHHHcCCcEEEE
Confidence 00134444 334444 48899999999999999998 5655
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.034 Score=69.77 Aligned_cols=171 Identities=18% Similarity=0.197 Sum_probs=98.9
Q ss_pred HHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeec--CCCCCccHHHHHHHHHh-CCCcEEEEcCCCHHHHHH
Q 044543 457 HTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPL--FDPPRHDSAETIRRALN-LGVNVKMITGDQLAIAKE 533 (962)
Q Consensus 457 ~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i--~D~lr~~~~~~I~~l~~-aGI~v~miTGD~~~tA~~ 533 (962)
+...+.|...-.|.+++-+.. +++....- ...+.+++.+++++|.+ .|+.|+++||........
T Consensus 481 ~~~~~~y~~~~~rLi~~D~DG-------------TL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~ 547 (726)
T PRK14501 481 EEIIARYRAASRRLLLLDYDG-------------TLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLER 547 (726)
T ss_pred HHHHHHHHhccceEEEEecCc-------------cccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHH
Confidence 344556655556777766543 33332110 12367899999999999 699999999999988877
Q ss_pred HHHHhCCCC---CC---C-Cccc---cc----------------------ccchhc---------cCCcch--------H
Q 044543 534 TGRRLGMGT---NM---Y-PSSA---LL----------------------GQIKDA---------NISALP--------V 564 (962)
Q Consensus 534 ia~~~Gi~~---~~---~-~~~~---l~----------------------~~~~~~---------~~~~~~--------~ 564 (962)
.....++.- +- . +... .. |...+. ...+.+ +
T Consensus 548 ~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l 627 (726)
T PRK14501 548 WFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANEL 627 (726)
T ss_pred HhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHH
Confidence 665454310 00 0 0000 00 000000 000011 1
Q ss_pred HHHhhh----cc--e-----EEecCH--hhHHHHHHHHhhC--CCEEEEEcCCcCChhhhhcC---CeeEEccCchHHHH
Q 044543 565 DELIEK----AD--G-----FAGVFP--EHKYEIVRKLQER--KHICGMTGDGVNDAPALKKA---DIGIAVADATDAAR 626 (962)
Q Consensus 565 ~~~~~~----~~--v-----~arvsP--~qK~~iV~~lq~~--g~~v~miGDG~ND~~aLk~A---dVGIamg~gt~~a~ 626 (962)
.+.+.. .. + +-.+.| -+|...++.+.+. ...|+++||+.||.+|++.+ ..+|+||++ +
T Consensus 628 ~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~ 703 (726)
T PRK14501 628 ILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----E 703 (726)
T ss_pred HHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----C
Confidence 111111 00 1 123334 4798888888773 35799999999999999987 588888874 4
Q ss_pred hcccccccCCCchHHHHHHH
Q 044543 627 GASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 627 ~aaDivl~~~~~~~i~~~i~ 646 (962)
.+|++.|.++ ..+...++
T Consensus 704 s~A~~~l~~~--~eV~~~L~ 721 (726)
T PRK14501 704 SRARYRLPSQ--REVRELLR 721 (726)
T ss_pred CcceEeCCCH--HHHHHHHH
Confidence 5788998654 44554443
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.016 Score=61.33 Aligned_cols=98 Identities=16% Similarity=0.161 Sum_probs=65.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCH-
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFP- 579 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP- 579 (962)
++.||+.++++.|++.|+++.++|+-....+...-+.+|+.... . .++.+.. ..+..|
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f-~-~i~~~~~-------------------~~~~KP~ 152 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF-D-AVITSEE-------------------EGVEKPH 152 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc-c-EEEEecc-------------------CCCCCCC
Confidence 47899999999999999999999998888888888888874321 1 1111100 111122
Q ss_pred -hhHHHHHHHHhhCCCEEEEEcCCc-CChhhhhcCCe-eEEcc
Q 044543 580 -EHKYEIVRKLQERKHICGMTGDGV-NDAPALKKADI-GIAVA 619 (962)
Q Consensus 580 -~qK~~iV~~lq~~g~~v~miGDG~-ND~~aLk~AdV-GIamg 619 (962)
+-=..+.+.+.-....++|+||.. +|+.+-++|++ .|.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 153 PKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 221222333322345699999998 99999999998 55554
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.021 Score=63.55 Aligned_cols=108 Identities=14% Similarity=0.094 Sum_probs=76.1
Q ss_pred ecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEe
Q 044543 497 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAG 576 (962)
Q Consensus 497 ~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar 576 (962)
...+++.+++.++++.|++.|+++.++||.....+..+.+.+|+...... .+.+.. .....+.. ..--+
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~--~i~~~~--------~~~~~~~~-~~~~k 251 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFD--DLIGRP--------PDMHFQRE-QGDKR 251 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchh--hhhCCc--------chhhhccc-CCCCC
Confidence 36788999999999999999999999999999999999999987531111 111111 00000000 00123
Q ss_pred cCHhhHHHHHHHHhh-CCCEEEEEcCCcCChhhhhcCCee
Q 044543 577 VFPEHKYEIVRKLQE-RKHICGMTGDGVNDAPALKKADIG 615 (962)
Q Consensus 577 vsP~qK~~iV~~lq~-~g~~v~miGDG~ND~~aLk~AdVG 615 (962)
-.|+-|....+.+-. .-..++|+||..+|+.+-++|++-
T Consensus 252 p~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~ 291 (300)
T PHA02530 252 PDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLE 291 (300)
T ss_pred CcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCe
Confidence 446777777776543 347899999999999999999985
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.023 Score=62.96 Aligned_cols=116 Identities=17% Similarity=0.115 Sum_probs=69.2
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.||+.+.++.|++.|+++.++|+-.......+-+..+...-......+.+.... ...-.|+
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~-----------------~~KP~p~ 206 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVP-----------------KKKPDPD 206 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccC-----------------CCCCCHH
Confidence 47899999999999999999999998877776665554321100000111110000 1111222
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEc-cCc--hHHHHhcccccc
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAV-ADA--TDAARGASDIVL 633 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIam-g~g--t~~a~~aaDivl 633 (962)
-=..+.+.+.-....++||||+.+|+.|-++|++.... ..| +.-....+|+++
T Consensus 207 ~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi 262 (286)
T PLN02779 207 IYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVF 262 (286)
T ss_pred HHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEE
Confidence 22334444443445699999999999999999985443 222 111123578887
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.033 Score=63.55 Aligned_cols=120 Identities=18% Similarity=0.152 Sum_probs=78.9
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+|+.+.++.|++.|+++.++|+-....+..+-+..||.... ..++.+.... ...-.|+
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yF--d~Iv~sddv~-----------------~~KP~Pe 276 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFF--SVIVAAEDVY-----------------RGKPDPE 276 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHc--eEEEecCcCC-----------------CCCCCHH
Confidence 36799999999999999999999999999999999999985321 1111111000 0111222
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEccCchHHH-HhcccccccCCCchHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG-IAVADATDAA-RGASDIVLTEPGLSVI 641 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG-Iamg~gt~~a-~~aaDivl~~~~~~~i 641 (962)
-=....+.+.-....|+|+||..+|+.|-++|++- |++..+.+.. ...+|+++ +++..+
T Consensus 277 ifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI--~s~~EL 337 (381)
T PLN02575 277 MFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVV--RRLDEL 337 (381)
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEE--CCHHHH
Confidence 22344444544566799999999999999999983 3444332222 23578877 445444
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.046 Score=56.10 Aligned_cols=128 Identities=20% Similarity=0.124 Sum_probs=70.7
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHH---------------HHHHHHHHhCCCCCCCCcccccccchhccCCcchHH
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLA---------------IAKETGRRLGMGTNMYPSSALLGQIKDANISALPVD 565 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~---------------tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~ 565 (962)
++.+|+.+++++|++.|+++.++|..... ....+-++.|+.-+ .++..... ..+.
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~----~i~~~~~~----~~~~-- 98 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD----GIYYCPHH----PEDG-- 98 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc----eEEECCCC----CCCC--
Confidence 36799999999999999999999987621 11122233444110 00000000 0000
Q ss_pred HHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEccCch--H-HHHhcc--cccccCCCch
Q 044543 566 ELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG-IAVADAT--D-AARGAS--DIVLTEPGLS 639 (962)
Q Consensus 566 ~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG-Iamg~gt--~-~a~~aa--Divl~~~~~~ 639 (962)
.....-.|+--..+.+.+.-..+.++|+||..+|+.+-++|++. |++..|. . .....+ |+++ +++.
T Consensus 99 ------~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~ 170 (181)
T PRK08942 99 ------CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLA 170 (181)
T ss_pred ------CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHH
Confidence 00112223333444454544456799999999999999999973 2332322 1 112235 7777 5566
Q ss_pred HHHHHHH
Q 044543 640 VIVSAVL 646 (962)
Q Consensus 640 ~i~~~i~ 646 (962)
.+...+.
T Consensus 171 el~~~l~ 177 (181)
T PRK08942 171 DLPQALK 177 (181)
T ss_pred HHHHHHH
Confidence 6665543
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.037 Score=57.48 Aligned_cols=94 Identities=15% Similarity=0.149 Sum_probs=63.6
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.||+.+++++|++.|+++.++|+-+......+.+.+|+.... . .++.... .....|.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f-d-~i~~s~~-------------------~~~~KP~ 150 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF-D-AVLSADA-------------------VRAYKPA 150 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh-h-eeEehhh-------------------cCCCCCC
Confidence 47899999999999999999999998888888888889974221 1 1111100 0111222
Q ss_pred --hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee
Q 044543 581 --HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG 615 (962)
Q Consensus 581 --qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG 615 (962)
-=..+.+.+.-....++|+||+.+|+.+-++|++-
T Consensus 151 ~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 151 PQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred HHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 11223333333345689999999999999998874
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.024 Score=57.96 Aligned_cols=93 Identities=12% Similarity=0.030 Sum_probs=57.6
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.||+.++++.|+++|+++.++|+... +...-+.+|+.... ..++.+... ...+-.|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~p~ 145 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF--DAIVDPAEI-----------------KKGKPDPE 145 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC--cEEEehhhc-----------------CCCCCChH
Confidence 5789999999999999999999997532 34567777774321 111111100 01111122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADI 614 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV 614 (962)
-=....+.+.-....++||||..+|+.+-++|++
T Consensus 146 ~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~ 179 (185)
T TIGR01990 146 IFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGM 179 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCC
Confidence 1122233332223458999999999999999987
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.052 Score=52.40 Aligned_cols=92 Identities=14% Similarity=0.144 Sum_probs=62.4
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCC--------HHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhc
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQ--------LAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKA 571 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~--------~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 571 (962)
-++.+++.++++.|+++|+++.++|+.. .+...++.+++|+.... ....+ .
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~--~---------------- 82 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV---LYACP--H---------------- 82 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE---EEECC--C----------------
Confidence 3578999999999999999999999988 77788888888874211 00000 0
Q ss_pred ceEEecCHhhHHHHHHHHh-hCCCEEEEEcC-CcCChhhhhcCCe
Q 044543 572 DGFAGVFPEHKYEIVRKLQ-ERKHICGMTGD-GVNDAPALKKADI 614 (962)
Q Consensus 572 ~v~arvsP~qK~~iV~~lq-~~g~~v~miGD-G~ND~~aLk~AdV 614 (962)
+..-.|+-=..+.+.++ -....++|+|| -.+|+.+-++|++
T Consensus 83 --~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 83 --CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred --CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCC
Confidence 01111222223444442 33467999999 5899999998876
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.017 Score=57.95 Aligned_cols=96 Identities=18% Similarity=0.156 Sum_probs=66.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.+.++.|++.|++++++|+-.........+++|+... ...++...+.. ...-.|+
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~--f~~i~~~~~~~-----------------~~Kp~~~ 137 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY--FDEIISSDDVG-----------------SRKPDPD 137 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG--CSEEEEGGGSS-----------------SSTTSHH
T ss_pred chhhhhhhhhhhcccccceeEEeecCCcccccccccccccccc--cccccccchhh-----------------hhhhHHH
Confidence 5789999999999999999999999999999999999998621 11222111100 0111122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG 615 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG 615 (962)
-=..+.+.+.-....+++|||..+|+.+-++|++-
T Consensus 138 ~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 138 AYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 22344444444456799999999999999988873
|
... |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.019 Score=62.18 Aligned_cols=54 Identities=24% Similarity=0.284 Sum_probs=47.3
Q ss_pred hhHHHHHHHHhhCCCEEEEEcC----CcCChhhhhcC-CeeEEccCchHHHHhcccccc
Q 044543 580 EHKYEIVRKLQERKHICGMTGD----GVNDAPALKKA-DIGIAVADATDAARGASDIVL 633 (962)
Q Consensus 580 ~qK~~iV~~lq~~g~~v~miGD----G~ND~~aLk~A-dVGIamg~gt~~a~~aaDivl 633 (962)
-+|..-++.|.+...-|+++|| |-||.+||+.| -.|++++++.+..+..+.+++
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 4799999999887788999999 99999999987 688999999999998877654
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.041 Score=59.53 Aligned_cols=45 Identities=31% Similarity=0.359 Sum_probs=36.2
Q ss_pred hhHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHH
Q 044543 580 EHKYEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDA 624 (962)
Q Consensus 580 ~qK~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~ 624 (962)
..|..-|+.|+++ + ..|.++||..||.+||..++-||.++++.+.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e 212 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPE 212 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHH
Confidence 5799999998875 2 3577799999999999999999999987766
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.045 Score=58.32 Aligned_cols=99 Identities=11% Similarity=0.025 Sum_probs=65.2
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCH-
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFP- 579 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP- 579 (962)
++.+|+.+.++.|++.|+++.++|+-....+...-+..|+.... ..++.+.. +.+-.|
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~iv~s~~-------------------~~~~KP~ 151 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL--DLLLSTHT-------------------FGYPKED 151 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC--CEEEEeee-------------------CCCCCCC
Confidence 57899999999999999999999998888888777778874311 11111110 011112
Q ss_pred -hhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee--EEccC
Q 044543 580 -EHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG--IAVAD 620 (962)
Q Consensus 580 -~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG--Iamg~ 620 (962)
+-=..+.+.+.-....++|+||..+|+.+-++|++. +++.+
T Consensus 152 p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 152 QRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeC
Confidence 211222233332345699999999999999999995 45543
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.049 Score=57.54 Aligned_cols=121 Identities=10% Similarity=0.023 Sum_probs=73.7
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+|+.+.+++|++. +++.++|+-....+..+-+++|+.... ..++...... ..+-.|+
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f--d~i~~~~~~~-----------------~~KP~~~ 156 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF--DDIFVSEDAG-----------------IQKPDKE 156 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc--CEEEEcCccC-----------------CCCCCHH
Confidence 4789999999999999 999999998888888888889885321 1111110000 0111122
Q ss_pred hHHHHHHHH-hhCCCEEEEEcCCc-CChhhhhcCCe-eEEcc--CchHHHHhcccccccCCCchHHHH
Q 044543 581 HKYEIVRKL-QERKHICGMTGDGV-NDAPALKKADI-GIAVA--DATDAARGASDIVLTEPGLSVIVS 643 (962)
Q Consensus 581 qK~~iV~~l-q~~g~~v~miGDG~-ND~~aLk~AdV-GIamg--~gt~~a~~aaDivl~~~~~~~i~~ 643 (962)
-=....+.+ .-....++||||.. +|+.+=+++++ +|.+. ..+......+|+++ ++++.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~ 222 (224)
T TIGR02254 157 IFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYE 222 (224)
T ss_pred HHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHh
Confidence 112333333 22335699999998 89999999997 44443 22211223456666 44555443
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=94.86 E-value=0.045 Score=54.76 Aligned_cols=110 Identities=14% Similarity=0.046 Sum_probs=66.3
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhh
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEH 581 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~q 581 (962)
++|+-++.++.+++.+++++++|+--.-....+=..++=-...+...+..... .......-.++-. .....--+
T Consensus 74 Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~---~ih~dg~h~i~~~---~ds~fG~d 147 (220)
T COG4359 74 IDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNND---YIHIDGQHSIKYT---DDSQFGHD 147 (220)
T ss_pred cCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCc---eEcCCCceeeecC---CccccCCC
Confidence 68999999999999999999999876555544444443111111111110000 0000000000000 01122358
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEE
Q 044543 582 KYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIA 617 (962)
Q Consensus 582 K~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIa 617 (962)
|...|+.|++....+.|+|||+.|..|-+.+|+=.|
T Consensus 148 K~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 148 KSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred cchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 999999999999999999999999988777666444
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=94.73 E-value=0.08 Score=53.82 Aligned_cols=94 Identities=15% Similarity=0.142 Sum_probs=61.2
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+.... ..++.+... ....-.|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLF--DVVIFSGDV-----------------GRGKPDPD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHC--CEEEEcCCC-----------------CCCCCCHH
Confidence 578999999999999999999999988777 5555557874311 111111000 01111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADI 614 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV 614 (962)
-=..+.+.+.-....+.|+||...|+.+-++|++
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 3333444444345679999999999999888877
|
HAD subfamilies caused by an overly broad single model. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=94.69 E-value=0.16 Score=50.90 Aligned_cols=102 Identities=17% Similarity=0.211 Sum_probs=65.8
Q ss_pred CCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHH---HHHHHh---C--CCCCCCCcccccccchhccCCcchHHHHhhh
Q 044543 499 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAK---ETGRRL---G--MGTNMYPSSALLGQIKDANISALPVDELIEK 570 (962)
Q Consensus 499 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~---~ia~~~---G--i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 570 (962)
+|.+.++++++++++++.|+++..+||.....+. ....++ | ++. ...+... +..+.. ..+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~----g~li~~~-------g~~~~~-~~~ 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH----GPVLLSP-------DRLFAA-LHR 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC----ceEEEcC-------Ccchhh-hhc
Confidence 4678999999999999999999999999988774 444442 2 321 0111000 000000 000
Q ss_pred cceEEecCHh-hHHHHHHHHhh-----CCCEEEEEcCCcCChhhhhcCCe
Q 044543 571 ADGFAGVFPE-HKYEIVRKLQE-----RKHICGMTGDGVNDAPALKKADI 614 (962)
Q Consensus 571 ~~v~arvsP~-qK~~iV~~lq~-----~g~~v~miGDG~ND~~aLk~AdV 614 (962)
.+. .-.|+ .|.+.++.+++ ....++..||+.+|+.+-++++|
T Consensus 93 -e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi 140 (157)
T smart00775 93 -EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGI 140 (157)
T ss_pred -ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCC
Confidence 111 22343 48888887777 35778889999999999887765
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=94.60 E-value=0.073 Score=61.45 Aligned_cols=114 Identities=18% Similarity=0.149 Sum_probs=70.1
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHH-HhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCH
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGR-RLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFP 579 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~-~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP 579 (962)
++.+|+.+.++.|++.|+++.++|+-....+...-. ..|+.... ..++.+... ....-.|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F--d~ii~~d~v-----------------~~~KP~p 153 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF--SVIVGGDEV-----------------EKGKPSP 153 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC--CEEEehhhc-----------------CCCCCCH
Confidence 367999999999999999999999998887776554 56763211 111111000 0111122
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEccCc--hHHHHhcccccc
Q 044543 580 EHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG-IAVADA--TDAARGASDIVL 633 (962)
Q Consensus 580 ~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG-Iamg~g--t~~a~~aaDivl 633 (962)
+-=..+.+.+.-..+.|+|+||..+|+.|-++|++. |++..+ .......+|.++
T Consensus 154 ~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i 210 (382)
T PLN02940 154 DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVI 210 (382)
T ss_pred HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEe
Confidence 222233344433456799999999999999999985 444432 222333466655
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=94.54 E-value=0.05 Score=55.60 Aligned_cols=92 Identities=13% Similarity=0.101 Sum_probs=58.8
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.||+.++++.|++.|+++.++|+- ..+..+-+.+|+..-. ..++.+.. ..+..|.
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f--~~v~~~~~-------------------~~~~kp~ 144 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF--DAIVDADE-------------------VKEGKPH 144 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC--CEeeehhh-------------------CCCCCCC
Confidence 57999999999999999999999986 5566777778874211 11111000 0011222
Q ss_pred hH--HHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee
Q 044543 581 HK--YEIVRKLQERKHICGMTGDGVNDAPALKKADIG 615 (962)
Q Consensus 581 qK--~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG 615 (962)
.. ..+.+.+.-....++|+||..+|+.+-++|++-
T Consensus 145 ~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 145 PETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 11 122222222235688999999999999999874
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.081 Score=53.92 Aligned_cols=104 Identities=9% Similarity=-0.029 Sum_probs=66.0
Q ss_pred CCCCCccHHHHHHHHHhCCCcEEEEcCC-CHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEec
Q 044543 499 FDPPRHDSAETIRRALNLGVNVKMITGD-QLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGV 577 (962)
Q Consensus 499 ~D~lr~~~~~~I~~l~~aGI~v~miTGD-~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arv 577 (962)
+-++.||+.++++.|+++|+++.++|+- ....+..+-..+|+..... -..+..... ..+.+.-
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~---------------~~~~~~~Fd-~iv~~~~ 106 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGK---------------TVPMHSLFD-DRIEIYK 106 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCC---------------cccHHHhce-eeeeccC
Confidence 3457899999999999999999999965 8888888888888741000 000000000 0111111
Q ss_pred CHhhH--HHHHHHHhhC------CCEEEEEcCCcCChhhhhcCCeeEEc
Q 044543 578 FPEHK--YEIVRKLQER------KHICGMTGDGVNDAPALKKADIGIAV 618 (962)
Q Consensus 578 sP~qK--~~iV~~lq~~------g~~v~miGDG~ND~~aLk~AdVGIam 618 (962)
.+..| ..+.+.+.+. -..|+|+||...|+.+-++|++-...
T Consensus 107 ~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 107 PNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred CchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 11112 2344544432 35699999999999999999885443
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.21 E-value=0.11 Score=55.04 Aligned_cols=123 Identities=14% Similarity=0.083 Sum_probs=73.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.||+.++++.|+ .|+++.++|......+...-++.|+.... . .++.+.... ...-.|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f-d-~v~~~~~~~-----------------~~KP~p~ 154 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF-D-LLVISEQVG-----------------VAKPDVA 154 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc-C-EEEEECccC-----------------CCCCCHH
Confidence 36899999999999 68999999998888888777788874211 0 111110000 0011121
Q ss_pred hHHHHHHHHhhC-CCEEEEEcCCc-CChhhhhcCCee-EEcc-CchH-HHHhcccccccCCCchHHHHHH
Q 044543 581 HKYEIVRKLQER-KHICGMTGDGV-NDAPALKKADIG-IAVA-DATD-AARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 581 qK~~iV~~lq~~-g~~v~miGDG~-ND~~aLk~AdVG-Iamg-~gt~-~a~~aaDivl~~~~~~~i~~~i 645 (962)
-=..+++.+.-. ...|+||||.. +|+.+-++|++- |.+. .+.. .....+|+++ +++..+...+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 155 IFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred HHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 112233333211 24699999998 799999999984 4543 2221 1112467777 5566665543
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=94.08 E-value=0.13 Score=54.54 Aligned_cols=116 Identities=16% Similarity=0.154 Sum_probs=63.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHH-HHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCH
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKE-TGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFP 579 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~-ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP 579 (962)
++.+|+.++|+.|++.|+++.++||-....... .-+..++.. .. ..++.+...+ + ....-.|
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~-~f-~~i~~~~~~~-------~--------~~~KP~p 140 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFS-LM-HHVVTGDDPE-------V--------KQGKPAP 140 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHh-hC-CEEEECChhh-------c--------cCCCCCc
Confidence 468999999999999999999999977653332 222223321 00 0111111000 0 0001112
Q ss_pred hhHHHHHHHHh---hCCCEEEEEcCCcCChhhhhcCCee-EEccCc--hHHHHhcccccc
Q 044543 580 EHKYEIVRKLQ---ERKHICGMTGDGVNDAPALKKADIG-IAVADA--TDAARGASDIVL 633 (962)
Q Consensus 580 ~qK~~iV~~lq---~~g~~v~miGDG~ND~~aLk~AdVG-Iamg~g--t~~a~~aaDivl 633 (962)
+-=...++.+. -....|+||||...|+.|-++|++- |++..+ +......+|+++
T Consensus 141 ~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi 200 (220)
T PLN02811 141 DIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVL 200 (220)
T ss_pred HHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHh
Confidence 21123333332 2235699999999999999999983 344322 211222567766
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=93.87 E-value=0.17 Score=51.66 Aligned_cols=26 Identities=12% Similarity=0.248 Sum_probs=23.8
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCC
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQ 527 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~ 527 (962)
+.|++.+++++|+++|+++.++|.-.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~ 52 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQS 52 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 57899999999999999999999765
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=93.45 E-value=0.13 Score=50.87 Aligned_cols=96 Identities=17% Similarity=0.151 Sum_probs=57.7
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCH---------------HHHHHHHHHhCCCCCCCCcccccccchhccCCcchHH
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVD 565 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~---------------~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~ 565 (962)
++.||+.++++.|++.|+++.++|.... .....+.+.+|+.....-.... +....
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~~--------- 96 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPH-HPADN--------- 96 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCC-CCCCC---------
Confidence 4789999999999999999999998652 3455667778874210000000 00000
Q ss_pred HHhhhcceEEecCHhhH--HHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe
Q 044543 566 ELIEKADGFAGVFPEHK--YEIVRKLQERKHICGMTGDGVNDAPALKKADI 614 (962)
Q Consensus 566 ~~~~~~~v~arvsP~qK--~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV 614 (962)
...+ .|+-+ ..+++.+.-..+.|.||||...|+.+-++|++
T Consensus 97 -------~~~~-KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi 139 (147)
T TIGR01656 97 -------CSCR-KPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGL 139 (147)
T ss_pred -------CCCC-CCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCC
Confidence 0000 22211 12222222233569999999999999998887
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=93.37 E-value=0.089 Score=52.11 Aligned_cols=90 Identities=21% Similarity=0.213 Sum_probs=55.7
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhh
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEH 581 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~q 581 (962)
..+|+.+.++.|++.|+++.++|+-....+...-+.. +... .. .++ +.. ++...-.|+-
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~-f~-~i~-~~~-----------------~~~~Kp~~~~ 123 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY-FD-LIL-GSD-----------------EFGAKPEPEI 123 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc-Cc-EEE-ecC-----------------CCCCCcCHHH
Confidence 4579999999999999999999999988888777765 3221 11 111 100 0011111221
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCC
Q 044543 582 KYEIVRKLQERKHICGMTGDGVNDAPALKKAD 613 (962)
Q Consensus 582 K~~iV~~lq~~g~~v~miGDG~ND~~aLk~Ad 613 (962)
=..+.+.+.-.. .|+|+||..+|+.|-++|+
T Consensus 124 ~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 124 FLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 122223332234 7999999999998877764
|
HAD subfamilies caused by an overly broad single model. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.26 E-value=0.6 Score=46.46 Aligned_cols=110 Identities=15% Similarity=0.197 Sum_probs=77.1
Q ss_pred HHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHh
Q 044543 459 IIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL 538 (962)
Q Consensus 459 ~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~ 538 (962)
..+.+..+|+|.+.+-..+ +++..- ....-|++.+=+++++.+|+++.++|.-++.-+...++.+
T Consensus 19 ~~~~L~~~Gikgvi~DlDN-------------TLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l 83 (175)
T COG2179 19 TPDILKAHGIKGVILDLDN-------------TLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKL 83 (175)
T ss_pred CHHHHHHcCCcEEEEeccC-------------ceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhc
Confidence 3567888999998775433 333221 1235678888899999999999999999999999999999
Q ss_pred CCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhC---CCEEEEEcCCc-CChhhhhcCCe
Q 044543 539 GMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQER---KHICGMTGDGV-NDAPALKKADI 614 (962)
Q Consensus 539 Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~---g~~v~miGDG~-ND~~aLk~AdV 614 (962)
|++- ++--..|--+ .+-+++++. -..|+||||-. .|+-+=+.|++
T Consensus 84 ~v~f------------------------------i~~A~KP~~~-~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 84 GVPF------------------------------IYRAKKPFGR-AFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred CCce------------------------------eecccCccHH-HHHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 9852 0111123322 455666664 45799999986 68777666655
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=93.23 E-value=0.2 Score=50.89 Aligned_cols=92 Identities=12% Similarity=0.046 Sum_probs=61.5
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCC-HHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecC
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQ-LAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVF 578 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~-~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvs 578 (962)
..+-+++.++++.|++.|+++.++|+-+ ...+..+.+.+|+... .+ ...-.
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~-------~~---------------------~~KP~ 93 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVL-------PH---------------------AVKPP 93 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEE-------cC---------------------CCCCC
Confidence 3578999999999999999999999987 5777777788876310 00 00011
Q ss_pred HhhHHHHHHHHhhCCCEEEEEcCCc-CChhhhhcCCe-eEEcc
Q 044543 579 PEHKYEIVRKLQERKHICGMTGDGV-NDAPALKKADI-GIAVA 619 (962)
Q Consensus 579 P~qK~~iV~~lq~~g~~v~miGDG~-ND~~aLk~AdV-GIamg 619 (962)
|+-=..+.+.+.-....++||||.. .|..+-++|++ +|.+.
T Consensus 94 p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~ 136 (170)
T TIGR01668 94 GCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVE 136 (170)
T ss_pred hHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEc
Confidence 1111122222222345599999998 79999999998 44553
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=93.00 E-value=0.2 Score=52.22 Aligned_cols=94 Identities=14% Similarity=0.069 Sum_probs=57.0
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++-||+.++++.|++.|+++.++|+-... ....-+.+|+.... ..++..... .+..-.|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~f--d~i~~s~~~-----------------~~~KP~~~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYF--DFVVTSYEV-----------------GAEKPDPK 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhc--ceEEeeccc-----------------CCCCCCHH
Confidence 57899999999999999999999975543 46666777763211 011100000 00111121
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCc-CChhhhhcCCe
Q 044543 581 HKYEIVRKLQERKHICGMTGDGV-NDAPALKKADI 614 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~-ND~~aLk~AdV 614 (962)
-=..+.+.+.-....++||||.. +|+.+-++|++
T Consensus 165 ~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 165 IFQEALERAGISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred HHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCC
Confidence 11222233322345799999997 89998888875
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=92.51 E-value=0.5 Score=51.54 Aligned_cols=86 Identities=15% Similarity=0.101 Sum_probs=57.6
Q ss_pred CCCCCccHHHHHHHHHhCCCcEEEEcCCCHH---HHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEE
Q 044543 499 FDPPRHDSAETIRRALNLGVNVKMITGDQLA---IAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFA 575 (962)
Q Consensus 499 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~---tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a 575 (962)
..++-|++.+.++.|++.|+++.++|+.... .....-++.|+...... .++.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d-------------------------~lll 170 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEE-------------------------HLLL 170 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcc-------------------------eEEe
Confidence 3457899999999999999999999997643 33455566787532111 1122
Q ss_pred ecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhh
Q 044543 576 GVFPEHKYEIVRKLQERKHICGMTGDGVNDAPAL 609 (962)
Q Consensus 576 rvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aL 609 (962)
|-....|..-.+.+.+.-.+++++||-.+|....
T Consensus 171 r~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 171 KKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDF 204 (266)
T ss_pred CCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhh
Confidence 2112245555556655566799999999998654
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=92.35 E-value=0.19 Score=50.58 Aligned_cols=97 Identities=14% Similarity=0.057 Sum_probs=56.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCC---------------CHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHH
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGD---------------QLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVD 565 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD---------------~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~ 565 (962)
++-+++.+++++|++.|+++.++|.- ....+..+-+.+|+.- . ..+.+.... .
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f---d-~ii~~~~~~----~---- 96 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF---D-DVLICPHFP----D---- 96 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce---e-EEEECCCCC----C----
Confidence 35689999999999999999999974 2345566677777641 0 011000000 0
Q ss_pred HHhhhcceEEecCHhhH--HHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee
Q 044543 566 ELIEKADGFAGVFPEHK--YEIVRKLQERKHICGMTGDGVNDAPALKKADIG 615 (962)
Q Consensus 566 ~~~~~~~v~arvsP~qK--~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG 615 (962)
.+..+| .|.-. ..+.+.+.-....+.||||+.+|+.+-++|++-
T Consensus 97 -----~~~~~~-KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~ 142 (161)
T TIGR01261 97 -----DNCDCR-KPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIR 142 (161)
T ss_pred -----CCCCCC-CCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCe
Confidence 000011 12211 112222221234599999999999999999884
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=92.31 E-value=0.35 Score=51.59 Aligned_cols=105 Identities=21% Similarity=0.196 Sum_probs=67.3
Q ss_pred CCCccHHHHHHHH--HhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecC
Q 044543 501 PPRHDSAETIRRA--LNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVF 578 (962)
Q Consensus 501 ~lr~~~~~~I~~l--~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvs 578 (962)
|+.|+.++.++.+ ++.|+.+.++|.=|.---..+=+.-|+.... ..+.+............+... ...-|.++.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f--~~I~TNpa~~~~~G~l~v~py--h~h~C~~C~ 146 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCF--SEIFTNPACFDADGRLRVRPY--HSHGCSLCP 146 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcccc--ceEEeCCceecCCceEEEeCc--cCCCCCcCC
Confidence 5688999999999 5689999999999988888888888875321 011111000000000000000 012355666
Q ss_pred H-hhHHHHHHHHhhC----C---CEEEEEcCCcCCh-hhh
Q 044543 579 P-EHKYEIVRKLQER----K---HICGMTGDGVNDA-PAL 609 (962)
Q Consensus 579 P-~qK~~iV~~lq~~----g---~~v~miGDG~ND~-~aL 609 (962)
| .=|..+++.+++. | ..|.++|||.||. |++
T Consensus 147 ~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~ 186 (234)
T PF06888_consen 147 PNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPAL 186 (234)
T ss_pred CccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCccc
Confidence 5 4799999988875 4 6899999999996 454
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.24 E-value=0.26 Score=55.94 Aligned_cols=96 Identities=13% Similarity=0.075 Sum_probs=57.4
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCC---------------CHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchH
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGD---------------QLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPV 564 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD---------------~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~ 564 (962)
-++.|++.+++++|+++|+++.++|+= ....+..+.+..|+..+ .++.+.... .+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd----~i~i~~~~~----sd-- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFD----EVLICPHFP----ED-- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCcee----eEEEeCCcC----cc--
Confidence 357899999999999999999999982 13345556666776310 010000000 00
Q ss_pred HHHhhhcceEEecCHhhHHHHHHHH-hh---CCCEEEEEcCCcCChhhhhcCCee
Q 044543 565 DELIEKADGFAGVFPEHKYEIVRKL-QE---RKHICGMTGDGVNDAPALKKADIG 615 (962)
Q Consensus 565 ~~~~~~~~v~arvsP~qK~~iV~~l-q~---~g~~v~miGDG~ND~~aLk~AdVG 615 (962)
+..+| .|+ ..++..+ ++ ....+.||||+.+|..+-+.|++-
T Consensus 99 -------~~~~r-KP~--p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~ 143 (354)
T PRK05446 99 -------NCSCR-KPK--TGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIK 143 (354)
T ss_pred -------cCCCC-CCC--HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCe
Confidence 00111 222 2233222 22 236799999999999999988884
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=92.23 E-value=0.17 Score=54.66 Aligned_cols=65 Identities=17% Similarity=0.169 Sum_probs=47.1
Q ss_pred cCHhhHHHHHHHHhhC----CCEEEEEcCCcCChhhhhcC--------CeeEEccCchHHHHhcccccccCCCchHHHHH
Q 044543 577 VFPEHKYEIVRKLQER----KHICGMTGDGVNDAPALKKA--------DIGIAVADATDAARGASDIVLTEPGLSVIVSA 644 (962)
Q Consensus 577 vsP~qK~~iV~~lq~~----g~~v~miGDG~ND~~aLk~A--------dVGIamg~gt~~a~~aaDivl~~~~~~~i~~~ 644 (962)
-.+.+|...++.+.++ ...++|+||+.||.+|++.+ ..||+|+.|. .+..|++++ ++...+...
T Consensus 163 p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~--~~~~~v~~~ 238 (244)
T TIGR00685 163 PRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHL--TGPQQVLEF 238 (244)
T ss_pred eCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeC--CCHHHHHHH
Confidence 3455788877776553 34789999999999999999 4788886443 355789988 455565555
Q ss_pred H
Q 044543 645 V 645 (962)
Q Consensus 645 i 645 (962)
+
T Consensus 239 L 239 (244)
T TIGR00685 239 L 239 (244)
T ss_pred H
Confidence 4
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=91.59 E-value=0.21 Score=49.52 Aligned_cols=94 Identities=16% Similarity=0.013 Sum_probs=64.2
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCH
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFP 579 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP 579 (962)
-++|||+.+.++.|+ .++++.+.|.=....+..+-+.+|+... +...++.+.. +.+.-|
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~-~f~~i~~~~d-------------------~~~~KP 102 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKY-FGYRRLFRDE-------------------CVFVKG 102 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCC-EeeeEEECcc-------------------ccccCC
Confidence 357999999999999 5799999999999999999999887431 1111121111 111112
Q ss_pred hhHHHHHHHHhh---CCCEEEEEcCCcCChhhhhcCCeeEEc
Q 044543 580 EHKYEIVRKLQE---RKHICGMTGDGVNDAPALKKADIGIAV 618 (962)
Q Consensus 580 ~qK~~iV~~lq~---~g~~v~miGDG~ND~~aLk~AdVGIam 618 (962)
. +.+.++. ....|.|+||..+|..|-++|.|-|..
T Consensus 103 ~----~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~ 140 (148)
T smart00577 103 K----YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKP 140 (148)
T ss_pred e----EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecC
Confidence 1 3333433 346799999999999998877665543
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=91.39 E-value=0.82 Score=49.20 Aligned_cols=94 Identities=17% Similarity=0.230 Sum_probs=59.2
Q ss_pred EEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHH--HHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhc
Q 044543 494 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAK--ETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKA 571 (962)
Q Consensus 494 G~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~--~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 571 (962)
|.+.-.+.+-|++.+++++|+++|+++.++|.-....+. +..+++|+..+. ...++.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~-~~~Ii~-------------------- 75 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADL-PEMIIS-------------------- 75 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccc-cceEEc--------------------
Confidence 556666788999999999999999999999985544333 455778875311 111111
Q ss_pred ceEEecCHhhHHHHHHHHhh---CCCEEEEEcCCcCChhhhhcCC
Q 044543 572 DGFAGVFPEHKYEIVRKLQE---RKHICGMTGDGVNDAPALKKAD 613 (962)
Q Consensus 572 ~v~arvsP~qK~~iV~~lq~---~g~~v~miGDG~ND~~aLk~Ad 613 (962)
+... ...-+.+.+++ .+..+.++||+.+|...+..++
T Consensus 76 ---s~~~--~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 76 ---SGEI--AVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred ---cHHH--HHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 0000 01122222233 2466999999999998886443
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=90.84 E-value=0.58 Score=45.14 Aligned_cols=39 Identities=8% Similarity=0.050 Sum_probs=34.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCC-CHHHHHHHHHHhC
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGD-QLAIAKETGRRLG 539 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD-~~~tA~~ia~~~G 539 (962)
++.+|+.+.++.|++.|+++.++|+- ....+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 7777777766666
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.68 E-value=0.26 Score=52.04 Aligned_cols=96 Identities=10% Similarity=0.080 Sum_probs=59.9
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+|++++++.| ++++.++|+.....+...=+..|+..... ..++.+.... ...-.|+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~-~~v~~~~~~~-----------------~~KP~p~ 146 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFP-DKLFSGYDIQ-----------------RWKPDPA 146 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCc-ceEeeHHhcC-----------------CCCCChH
Confidence 4568999999988 59999999998888877777788753211 1111111100 0011122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEE
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIA 617 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIa 617 (962)
-=....+.+.-....|+|+||..+|+.+=++|++...
T Consensus 147 ~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i 183 (221)
T PRK10563 147 LMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVF 183 (221)
T ss_pred HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEE
Confidence 2222233332233459999999999999999998664
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=90.19 E-value=1.2 Score=47.43 Aligned_cols=87 Identities=20% Similarity=0.294 Sum_probs=54.2
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHH---HHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEe
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAK---ETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAG 576 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~---~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar 576 (962)
-|+-+++.+.++.|++.|++|+++||....... +--++.|+.. +....+.+. .+ . ..
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~--~~~LiLR~~-~d-----~------------~~ 178 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTG--WKHLILRGL-ED-----S------------NK 178 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCC--cCeeeecCC-CC-----C------------Cc
Confidence 367899999999999999999999999875422 2234456542 111111110 00 0 00
Q ss_pred cCHhhHHHHHHHHhhCCC-EEEEEcCCcCCh
Q 044543 577 VFPEHKYEIVRKLQERKH-ICGMTGDGVNDA 606 (962)
Q Consensus 577 vsP~qK~~iV~~lq~~g~-~v~miGDG~ND~ 606 (962)
-.-+-|.+.-+.+.+.|+ +++.+||-.+|.
T Consensus 179 ~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 179 TVVTYKSEVRKSLMEEGYRIWGNIGDQWSDL 209 (229)
T ss_pred hHhHHHHHHHHHHHhCCceEEEEECCChHHh
Confidence 001226666667776765 678899998886
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=90.13 E-value=0.92 Score=59.24 Aligned_cols=114 Identities=15% Similarity=0.194 Sum_probs=75.5
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCH--
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFP-- 579 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP-- 579 (962)
+-||+.+.++.|+++|+++.++|+-....+..+-++.|+...... .++.+.. +.+..|
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd-~iv~~~~-------------------~~~~KP~P 221 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFD-AIVSADA-------------------FENLKPAP 221 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCC-EEEECcc-------------------cccCCCCH
Confidence 578999999999999999999999998888888888888521111 1111110 111122
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEccC---chHHHHhcccccccC
Q 044543 580 EHKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAVAD---ATDAARGASDIVLTE 635 (962)
Q Consensus 580 ~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIamg~---gt~~a~~aaDivl~~ 635 (962)
+-=....+.+.-....|+|+||..+|+.|-++|++ -|++.. ..+.....+|+++.+
T Consensus 222 e~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~ 281 (1057)
T PLN02919 222 DIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKD 281 (1057)
T ss_pred HHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 22223344444345679999999999999999998 455532 233344567888844
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=89.93 E-value=0.59 Score=49.62 Aligned_cols=98 Identities=12% Similarity=0.061 Sum_probs=62.6
Q ss_pred CCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhC---CCCCCCCcccccccchhccCCcchHHHHhhhcceEE
Q 044543 499 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLG---MGTNMYPSSALLGQIKDANISALPVDELIEKADGFA 575 (962)
Q Consensus 499 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~G---i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a 575 (962)
.-++.+|+.+++++|+++|+++.++|.........+-+..+ +..- + +... +..+..
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~------f--------------~~~f-d~~~g~ 151 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY------F--------------SGYF-DTTVGL 151 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh------c--------------ceEE-EeCccc
Confidence 34689999999999999999999999988776666554442 2110 0 0000 001111
Q ss_pred ecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEE
Q 044543 576 GVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIA 617 (962)
Q Consensus 576 rvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIa 617 (962)
.-.|+-=..+.+.+.-....++|+||...|+.|-++|++-..
T Consensus 152 KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 152 KTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred CCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 112332234444444344669999999999999999998543
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=89.92 E-value=0.43 Score=50.00 Aligned_cols=103 Identities=16% Similarity=0.093 Sum_probs=57.8
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHH--HHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEec
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAI--AKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGV 577 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~t--A~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arv 577 (962)
-++.|++.+.++.|++.|+++.++|...... ........++.... . .++..... ....-
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f-d-~v~~s~~~-----------------~~~KP 153 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF-D-AVVESCLE-----------------GLRKP 153 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC-C-EEEEeeec-----------------CCCCC
Confidence 3578999999999999999999999865432 22222223332110 0 00000000 00111
Q ss_pred CHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEccCc
Q 044543 578 FPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAVADA 621 (962)
Q Consensus 578 sP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIamg~g 621 (962)
.|+-=..+.+.+.-....++||||...|+.+=++|++ .|.+..+
T Consensus 154 ~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~~ 198 (211)
T TIGR02247 154 DPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSDE 198 (211)
T ss_pred CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECCH
Confidence 2222222333333334568999999999999999998 4444443
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=88.72 E-value=1 Score=45.62 Aligned_cols=40 Identities=8% Similarity=0.029 Sum_probs=31.4
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCH------------HHHHHHHHHhCCC
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQL------------AIAKETGRRLGMG 541 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~------------~tA~~ia~~~Gi~ 541 (962)
+-+|+.+++++|+++|+++.++|.-.. .....+-+.+|+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~ 94 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP 94 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence 348999999999999999999996443 2345667778873
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=87.90 E-value=0.63 Score=53.26 Aligned_cols=67 Identities=24% Similarity=0.199 Sum_probs=47.6
Q ss_pred EecCHh---hHHHHHHHHhhC-C-----C-EEEEEcCCcCChhhhhc-----CCeeEEccCchHHHHhcccccccCCCch
Q 044543 575 AGVFPE---HKYEIVRKLQER-K-----H-ICGMTGDGVNDAPALKK-----ADIGIAVADATDAARGASDIVLTEPGLS 639 (962)
Q Consensus 575 arvsP~---qK~~iV~~lq~~-g-----~-~v~miGDG~ND~~aLk~-----AdVGIamg~gt~~a~~aaDivl~~~~~~ 639 (962)
-.+.|. +|..-|+.+.+. | . .++++||+.||..|++. +++||+|++|.... .|++.| ++-.
T Consensus 292 lEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~t--~A~y~L--~dp~ 367 (384)
T PLN02580 292 LEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKES--NAFYSL--RDPS 367 (384)
T ss_pred EEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCCc--cceEEc--CCHH
Confidence 345553 899888877653 2 1 35899999999999996 68999998765422 578888 4455
Q ss_pred HHHHHH
Q 044543 640 VIVSAV 645 (962)
Q Consensus 640 ~i~~~i 645 (962)
.+...+
T Consensus 368 eV~~~L 373 (384)
T PLN02580 368 EVMEFL 373 (384)
T ss_pred HHHHHH
Confidence 555555
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=87.64 E-value=1.8 Score=43.77 Aligned_cols=105 Identities=16% Similarity=0.192 Sum_probs=73.0
Q ss_pred HHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCc--EEEEcCC-------CHHHHHH
Q 044543 463 FADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVN--VKMITGD-------QLAIAKE 533 (962)
Q Consensus 463 ~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~--v~miTGD-------~~~tA~~ 533 (962)
+...|.|.+.+=... ++ ...=++.+-++..+.+++|++.+.. |.++|-- +...|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL--~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TL--TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CC--CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 567788887764332 11 1234677889999999999999875 9999976 4788999
Q ss_pred HHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhC-----CCEEEEEcCCc-CChh
Q 044543 534 TGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQER-----KHICGMTGDGV-NDAP 607 (962)
Q Consensus 534 ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~-----g~~v~miGDG~-ND~~ 607 (962)
+.+.+|+.- + .+..-.|.-..++.+.++.+ -+.++||||-. .|+-
T Consensus 101 ~~~~lgIpv-------l----------------------~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 101 LEKALGIPV-------L----------------------RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred HHHhhCCcE-------E----------------------EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 999999741 0 12233576666788887755 56799999974 4555
Q ss_pred hhhc
Q 044543 608 ALKK 611 (962)
Q Consensus 608 aLk~ 611 (962)
+=..
T Consensus 152 ~gN~ 155 (168)
T PF09419_consen 152 MGNR 155 (168)
T ss_pred Hhhc
Confidence 4333
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=87.16 E-value=1.5 Score=45.51 Aligned_cols=100 Identities=12% Similarity=0.033 Sum_probs=57.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHH-HHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCH
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG-RRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFP 579 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia-~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP 579 (962)
++.||+.++++.|++.|+++.++|.-........- +..++.... . .++.... +....|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~f-d-~v~~s~~-------------------~~~~KP 142 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAA-D-HIYLSQD-------------------LGMRKP 142 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhc-C-EEEEecc-------------------cCCCCC
Confidence 46899999999999999999999987655433221 112321100 0 0000000 001112
Q ss_pred --hhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEccCc
Q 044543 580 --EHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG-IAVADA 621 (962)
Q Consensus 580 --~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG-Iamg~g 621 (962)
+==..+.+.+.-....+.|+||...|+.+-++|++- |.+.++
T Consensus 143 ~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~~~~~ 187 (199)
T PRK09456 143 EARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSILVTDK 187 (199)
T ss_pred CHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEEEecCC
Confidence 111233333333345689999999999999999884 444443
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=86.84 E-value=2.4 Score=53.88 Aligned_cols=67 Identities=7% Similarity=0.089 Sum_probs=44.5
Q ss_pred HHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCCCCccHHHHHHHH-HhCCCcEEEEcCCCHHHHHHHHH
Q 044543 458 TIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRA-LNLGVNVKMITGDQLAIAKETGR 536 (962)
Q Consensus 458 ~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l-~~aGI~v~miTGD~~~tA~~ia~ 536 (962)
..++.|.....|.+++-|.. +|+-.....-.|-+++.+++++| ++.|+.|.++||....+....-.
T Consensus 586 ~i~~~y~~~~~rlI~LDyDG-------------TLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~ 652 (854)
T PLN02205 586 HIVSAYKRTTTRAILLDYDG-------------TLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFS 652 (854)
T ss_pred HHHHHHHhhcCeEEEEecCC-------------cccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhC
Confidence 34455555555666655533 33321112235667899999997 77899999999999998877664
Q ss_pred H
Q 044543 537 R 537 (962)
Q Consensus 537 ~ 537 (962)
.
T Consensus 653 ~ 653 (854)
T PLN02205 653 P 653 (854)
T ss_pred C
Confidence 4
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=86.61 E-value=3.1 Score=43.35 Aligned_cols=108 Identities=19% Similarity=0.202 Sum_probs=66.4
Q ss_pred CCCccHHHHHHHHHhCCC-cEEEEcCCCHHHHHHHHHHhCCCC-------CCCCcccccccchhccCCcchHHHHhhhcc
Q 044543 501 PPRHDSAETIRRALNLGV-NVKMITGDQLAIAKETGRRLGMGT-------NMYPSSALLGQIKDANISALPVDELIEKAD 572 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI-~v~miTGD~~~tA~~ia~~~Gi~~-------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 572 (962)
|.-|+..++|+.+++.|- .++++|--|.---.++-+..|+.+ |.-.... .|.- .+...- ...
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da-~G~L--------~v~pyH-~~h 153 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDA-SGRL--------LVRPYH-TQH 153 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCC-CCcE--------EeecCC-CCC
Confidence 567899999999999997 999999888777777777777632 2100000 0000 000000 112
Q ss_pred eEEecCHh-hHHHHHHHHhhCC-------CEEEEEcCCcCCh-hhhhcCCeeEEc
Q 044543 573 GFAGVFPE-HKYEIVRKLQERK-------HICGMTGDGVNDA-PALKKADIGIAV 618 (962)
Q Consensus 573 v~arvsP~-qK~~iV~~lq~~g-------~~v~miGDG~ND~-~aLk~AdVGIam 618 (962)
-|.++-|. =|..++..++..+ ..+.++|||.||. |+++...--+||
T Consensus 154 sC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~am 208 (256)
T KOG3120|consen 154 SCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAM 208 (256)
T ss_pred ccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceec
Confidence 25555443 4777776665431 2788999999995 777766555566
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=86.27 E-value=4.6 Score=42.04 Aligned_cols=37 Identities=19% Similarity=0.172 Sum_probs=32.5
Q ss_pred cHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCC
Q 044543 505 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 541 (962)
Q Consensus 505 ~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~ 541 (962)
.+.+.+.+|+++|+.|+.+|--....-...-+++|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999998888778888888875
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=86.12 E-value=1.2e+02 Score=39.51 Aligned_cols=200 Identities=15% Similarity=0.162 Sum_probs=102.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCC-----Ce-EEE----EECCeEEEEECcCcCCCcEEEEeCCCeee
Q 044543 107 QDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLA-----PQ-TKV----LRDGAWREQEASILVPGDVISIKLGDIIP 176 (962)
Q Consensus 107 ~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~-----~~-~~V----~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VP 176 (962)
...+++++.++++.+.++.+++..++..+...+... .+ ..+ +.-|....+...|.+|.|.+.++ |+..=
T Consensus 133 ~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~-g~~l~ 211 (941)
T TIGR01517 133 AILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFIS-GLSLE 211 (941)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEE-cCcEE
Confidence 344556667788888888888877765543432211 12 222 24588999999999999999986 43444
Q ss_pred cceEEEecCCeeEecccccCCCeeeecCCCCcccccceeecceEEEEEEEecchhHHHhHHHhh-hccCCCChHHHHHHH
Q 044543 177 ADARLLDGDPLKIDQSALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV-DSTNQEGHFQKVLTA 255 (962)
Q Consensus 177 aD~~ll~g~~~~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~-~~~~~~~~l~~~~~~ 255 (962)
+|=-.+.|++.-++-. .|+.+- -..|..+.+|+...--...|.=+.-|.=. +..... .++.-...+.+..+.
T Consensus 212 VdES~LTGES~pv~K~--~~~~n~--v~~GT~v~~G~~~~iV~~tG~~T~~gki~---~~~~~~~~~t~l~~~~~~~~~~ 284 (941)
T TIGR01517 212 IDESSITGESDPIKKG--APKDSF--LLSGTVVNEGSGRMLVTAVGVNSFGGKLM---MELRAEGEDTPLQEKLSELAGL 284 (941)
T ss_pred EEecccCCCCCccccc--CCCCce--EEeCCeEEeeEEEEEEEEeCCCcHHHHHH---HhhccCCCCCcHHHHHHHHHHH
Confidence 5666666654323221 133221 23466666665332211222222223211 111111 112222233333334
Q ss_pred HHHHHHH---HHHHHHHHHHHHH------------hhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHH
Q 044543 256 IGNFCIC---SIAIGMVIEIIVM------------YPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 314 (962)
Q Consensus 256 i~~~~~~---~i~~~~~~~~~~~------------~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~ 314 (962)
+..+.+. ++++..++..+.. .......+..++..+++..-.++|.++++++..+....+
T Consensus 285 ~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~ma 358 (941)
T TIGR01517 285 IGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMM 358 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHH
Confidence 4333221 1111111111110 011223455667777888888999999999998876655
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=84.66 E-value=15 Score=42.02 Aligned_cols=61 Identities=21% Similarity=0.192 Sum_probs=42.8
Q ss_pred hHHHHHHHHhhC-------CCEEEEEcCCcCChhhhhcC-----CeeEEccCchHHHHhcccccccCCCchHHHHHH
Q 044543 581 HKYEIVRKLQER-------KHICGMTGDGVNDAPALKKA-----DIGIAVADATDAARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 581 qK~~iV~~lq~~-------g~~v~miGDG~ND~~aLk~A-----dVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i 645 (962)
+|...|+.|.+. +..++++||...|-.|++.. ++||-+|.... ..+|++.| ++.+.+...+
T Consensus 283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k--~T~A~y~L--~dp~eV~~fL 355 (366)
T PLN03017 283 DKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK--DTDASYSL--QDPSEVMDFL 355 (366)
T ss_pred CHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC--CCcceEeC--CCHHHHHHHH
Confidence 788888877652 23689999999999999865 46777774221 24688888 4555665555
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=83.21 E-value=2.2 Score=47.77 Aligned_cols=47 Identities=19% Similarity=0.261 Sum_probs=39.0
Q ss_pred EEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHH---HHhCC
Q 044543 494 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG---RRLGM 540 (962)
Q Consensus 494 G~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia---~~~Gi 540 (962)
|.+.-.+.+=+++.++|++|++.|++++++|+....+...+. +++|+
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 555566777799999999999999999999999977777776 45665
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=82.86 E-value=1.4 Score=44.95 Aligned_cols=97 Identities=13% Similarity=0.086 Sum_probs=60.3
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.+++++|+ .++.++|.-....+...-+.+|+.... . .++........ ..++.-.|+
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~f-d-~i~~~~~~~~~-------------~~~~KP~p~ 145 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCF-D-GIFCFDTANPD-------------YLLPKPSPQ 145 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhh-C-eEEEeecccCc-------------cCCCCCCHH
Confidence 36789999999997 479999998888888888999974311 1 11111000000 000111222
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG 615 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG 615 (962)
-=..+++.+......++|+||...|+.+=++|++-
T Consensus 146 ~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 146 AYEKALREAGVDPERAIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred HHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCE
Confidence 22344444444556789999999999998888764
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=82.39 E-value=2 Score=44.43 Aligned_cols=97 Identities=12% Similarity=0.078 Sum_probs=55.8
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCC--CCcccccccchhccCCcchHHHHhhhcceEEecC
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNM--YPSSALLGQIKDANISALPVDELIEKADGFAGVF 578 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvs 578 (962)
++.||+.+++++|++.+ +.+++|.-+..+....-+.+|+..-. +-..+ +.++..
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i-----------------------~~~~~~ 129 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEV-----------------------LMCGHD 129 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEE-----------------------EEeccC
Confidence 36899999999999975 66777764444443344556653110 00011 111111
Q ss_pred HhhHHHHHH-HHhhCC-CEEEEEcCCcCChhhhhcC--Cee-EEccCch
Q 044543 579 PEHKYEIVR-KLQERK-HICGMTGDGVNDAPALKKA--DIG-IAVADAT 622 (962)
Q Consensus 579 P~qK~~iV~-~lq~~g-~~v~miGDG~ND~~aLk~A--dVG-Iamg~gt 622 (962)
+. |-++++ .+++.| ..++|+||..+|+.+-++| ++- |.+..|.
T Consensus 130 ~~-kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~ 177 (197)
T PHA02597 130 ES-KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGE 177 (197)
T ss_pred cc-cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEEEecchh
Confidence 11 223333 333333 4588999999999999999 884 4444443
|
2 hypothetical protein; Provisional |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=82.30 E-value=2.8 Score=47.24 Aligned_cols=91 Identities=14% Similarity=0.075 Sum_probs=65.8
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHH----hCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEe
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR----LGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAG 576 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~----~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar 576 (962)
++.+++.++++.|++.|+++.++|.-+...|..+-+. +|+..... +..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~----------------------------~~~ 82 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFD----------------------------ARS 82 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHee----------------------------EEE
Confidence 4578999999999999999999999999999998877 66532110 111
Q ss_pred cCHhhHHHHHHHH-hh---CCCEEEEEcCCcCChhhhhcCCeeEEcc
Q 044543 577 VFPEHKYEIVRKL-QE---RKHICGMTGDGVNDAPALKKADIGIAVA 619 (962)
Q Consensus 577 vsP~qK~~iV~~l-q~---~g~~v~miGDG~ND~~aLk~AdVGIamg 619 (962)
..+.-|.+.++.+ ++ .-..++|+||...|..+.+++..++.+-
T Consensus 83 ~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 83 INWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred EecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 1123344434333 22 3467999999999999999998887553
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=82.04 E-value=50 Score=43.91 Aligned_cols=116 Identities=8% Similarity=0.064 Sum_probs=79.0
Q ss_pred HHHhhcCCCccCccccchHHHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhh
Q 044543 53 KRLVIFGPNKLEEKKESKVLKFLGFMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGN 132 (962)
Q Consensus 53 ~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~ 132 (962)
++.+..-+|.+.--+.++|.+|-+...-+|..+.++-.+-.+... ++...+...+.++++..+...++-+..+++.+
T Consensus 90 N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~---~~~t~~~PL~~vl~v~~ike~~Ed~~r~k~d~ 166 (1178)
T PLN03190 90 NSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVF---GRGASILPLAFVLLVTAVKDAYEDWRRHRSDR 166 (1178)
T ss_pred CeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccC---CcchHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 666666677777667788877766544444444444444333321 23457888889999999999999999998887
Q ss_pred HHHHhhcCC---CCeEEE----EECCeEEEEECcCcCCCcEEEEeC
Q 044543 133 AAAALMAGL---APQTKV----LRDGAWREQEASILVPGDVISIKL 171 (962)
Q Consensus 133 ~~~~l~~~~---~~~~~V----~Rdg~~~~i~~~~Lv~GDiI~l~~ 171 (962)
....-.... .....+ ++-|....+...|.+|-|.+.+..
T Consensus 167 ~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~S 212 (1178)
T PLN03190 167 IENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLST 212 (1178)
T ss_pred hhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEec
Confidence 776554331 111222 356888999999999999999973
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 962 | ||||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 0.0 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 1e-116 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 6e-42 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 8e-42 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 5e-41 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 1e-39 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 9e-26 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 9e-26 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 1e-25 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 2e-25 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 9e-20 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 1e-19 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 9e-19 | ||
| 2o98_P | 52 | Structure Of The 14-3-3 H+-Atpase Plant Complex Len | 5e-17 | ||
| 3m50_P | 31 | Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY E | 1e-07 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 3e-07 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 3e-07 | ||
| 2kij_A | 124 | Solution Structure Of The Actuator Domain Of The Co | 4e-06 | ||
| 2hc8_A | 113 | Structure Of The A. Fulgidus Copa A-Domain Length = | 2e-05 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 2e-05 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 2e-05 |
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|2O98|P Chain P, Structure Of The 14-3-3 H+-Atpase Plant Complex Length = 52 | Back alignment and structure |
|
| >pdb|3M50|P Chain P, Structure Of The 14-3-3PMA2 COMPLEX STABILIZED BY EPIBESTAT Length = 31 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|2KIJ|A Chain A, Solution Structure Of The Actuator Domain Of The Copper- Transporting Atpase Atp7a Length = 124 | Back alignment and structure |
|
| >pdb|2HC8|A Chain A, Structure Of The A. Fulgidus Copa A-Domain Length = 113 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 962 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 0.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 0.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-144 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 1e-143 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 5e-68 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 2e-54 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 6e-48 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-46 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 1e-32 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 2e-31 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 2e-30 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 3e-28 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 7e-15 | |
| 2o98_P | 52 | H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, | 2e-26 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 2e-17 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 1e-15 | |
| 3m50_P | 31 | N.plumbaginifolia H+-translocating ATPase mRNA; al | 2e-14 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 4e-13 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 9e-12 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-08 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 7e-06 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 9e-06 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 1e-05 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 2e-05 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 2e-05 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 2e-05 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 2e-05 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 2e-05 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 2e-05 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 3e-05 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 1e-04 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 5e-04 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 7e-04 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 9e-04 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 1251 bits (3239), Expect = 0.0
Identities = 743/881 (84%), Positives = 806/881 (91%)
Query: 16 SLEEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKKESKVLKFL 75
SLE+IK E VDLE+IPI EVF+QLKC+REGL+ +EG+ R+ IFGPNKLEEKKESK+LKFL
Sbjct: 3 SLEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFL 62
Query: 76 GFMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAA 135
GFMWNPLSWVME+AAIMAIALANG G+PPDWQDFVGI+ LL+INSTISFIEENNAGNAAA
Sbjct: 63 GFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAA 122
Query: 136 ALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALT 195
ALMAGLAP+TKVLRDG W EQEA+ILVPGD++SIKLGDIIPADARLL+GDPLK+DQSALT
Sbjct: 123 ALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALT 182
Query: 196 GESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTA 255
GESLPVTK PG EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ GHFQKVLTA
Sbjct: 183 GESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 242
Query: 256 IGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 315
IGNFCICSIAIGMVIEIIVMYPIQ R YR+GIDNLLVLLIGGIPIAMPTVLSVTMAIGSH
Sbjct: 243 IGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 302
Query: 316 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYG 375
RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL+VDKNLVEVF K ++KD V+L+
Sbjct: 303 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFA 362
Query: 376 ARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRIS 435
A ASRVENQDAIDA +VGML D KEARAGI E+HFLPFNPV+KRTA+TYID G+WHR+S
Sbjct: 363 AMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVS 422
Query: 436 KGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGL 495
KGAPEQI+EL D+ K +IIDK+A+RGLRSLAVA Q VPEKTKESPG PW+FVGL
Sbjct: 423 KGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGL 482
Query: 496 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIK 555
LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI KETGRRLGMGTNMYPSSALLG K
Sbjct: 483 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHK 542
Query: 556 DANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG 615
DAN++++PV+ELIEKADGFAGVFPEHKYEIV+KLQERKHI GMTGDGVNDAPALKKADIG
Sbjct: 543 DANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIG 602
Query: 616 IAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLL 675
IAVADATDAARGASDIVLTEPGLSVI+SAVLTSRAIFQRMKNYTIYAVSITIRIV GF+L
Sbjct: 603 IAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFML 662
Query: 676 IALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGTYLAV 735
IALIW+FDFS FMVLIIAILNDGTIMTISKDRVKPSP PD+WKLKEIFATG+VLG Y A+
Sbjct: 663 IALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYQAI 722
Query: 736 MTVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLER 795
MTV+FFWA H + FFS+ FGVRSIRD+ HEL AVYLQVSI+SQALIFVTRSRSWSF+ER
Sbjct: 723 MTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTRSRSWSFVER 782
Query: 796 PGLLLIAAFIIAQLVATLIAVYANFGFARIHGIGWGWVGVIWLYSIVFYIPLDVLKFIVR 855
PG LL+ AF+IAQL+ATLIAVYAN+ FA+I GIGWGW GVIWLYSIV Y PLDV KF +R
Sbjct: 783 PGALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIR 842
Query: 856 YALTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQRTLH 896
Y L+GKAW NL ENKTAFT KKDYG+ EREAQW H
Sbjct: 843 YILSGKAWLNLFENKTAFTMKKDYGKEEREAQWMRGSHHHH 883
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 1099 bits (2844), Expect = 0.0
Identities = 303/883 (34%), Positives = 484/883 (54%), Gaps = 45/883 (5%)
Query: 18 EEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKKESKVLKFLGF 77
EE ++ R+ ++ + TR GL++EE +R +G N+++E+KE+ LKFLGF
Sbjct: 62 EEEEEATPGGGRVVPEDMLQ--TDTRVGLTSEEVVQRRRKYGLNQMKEEKENHFLKFLGF 119
Query: 78 MWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAAL 137
P+ +VME AA++A L DW DF I LLL+N+ + F++E AG+ L
Sbjct: 120 FVGPIQFVMEGAAVLAAGL-------EDWVDFGVICGLLLLNAVVGFVQEFQAGSIVDEL 172
Query: 138 MAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDP-LKIDQSALTG 196
LA + VLRDG +E EA +VPGD++ ++ G IIPAD R++ D L++DQSALTG
Sbjct: 173 KKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSALTG 232
Query: 197 ESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQEGHFQKVLTA 255
ESL V K GD+VF+ S K+GE V+ ATG +TF G+AA LV++ GHF +VL
Sbjct: 233 ESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNG 292
Query: 256 IGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 315
IG + + ++I + + + ++ L + I G+P+ +P V++ TMA+G+
Sbjct: 293 IGTILLILVIFTLLIVWVSSF-YRSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAA 351
Query: 316 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYG 375
L+++ AI ++++AIE +AG+++LCSDKTGTLT NKL++ V +D + ++L
Sbjct: 352 YLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYT---VAGVDPEDLMLTA 408
Query: 376 ARASRVENQ--DAIDACIVGMLGDAKEARAGITE---LHFLPFNPVEKRTAITYIDSDGS 430
A+ + + DAID + L A++ +++ L F PF+PV K+ G
Sbjct: 409 CLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGE 468
Query: 431 WHRISKGAPEQIIELCN----LREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESP 486
KGAP +++ + E+V + +FA RG RSL VA +
Sbjct: 469 RITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG-------- 520
Query: 487 GGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP 546
G W+ +G++P DPPRHD+ +T+ A LG+++KM+TGD + IA+ET R+LG+GTN+Y
Sbjct: 521 EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYN 580
Query: 547 SSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDA 606
+ L ++ V + +E ADGFA VFP+HKY +V LQ+R ++ MTGDGVNDA
Sbjct: 581 AERLGLG-GGGDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDA 639
Query: 607 PALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSIT 666
P+LKKAD GIAV ++DAAR A+DIV PGL I+ A+ TSR IF RM Y +Y ++++
Sbjct: 640 PSLKKADTGIAVEGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALS 699
Query: 667 IRIVLGFLLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATG 726
I + + L I + +V+ IAI D + I+ D S P W L +++
Sbjct: 700 IHLEIFLGLWIAILNRSLNIELVVFIAIFADVATLAIAYDNAPYSQTPVKWNLPKLWGMS 759
Query: 727 IVLGTYLAVMTVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFVTR 786
++LG LAV T + +++ I + + ++LQ+S+ LIF+TR
Sbjct: 760 VLLGVVLAVGTWITVTTMYAQ------GENGGIVQNFGNMDEVLFLQISLTENWLIFITR 813
Query: 787 SRSWSFLERPGLLLIAAFIIAQLVATLIAVYANFGFARIHGIGWGWVGVIWLYSIVFYIP 846
+ + P L A + ++AT + +G+ V IW++S +
Sbjct: 814 ANGPFWSSIPSWQLSGAIFLVDILATCFTI---WGWFEHSDTSIVAVVRIWIFSFGIFCI 870
Query: 847 LDVLKFIVRYALTGKAWDNLLENKTAFTTKKDYGRGEREAQWA 889
+ + +I++ ++ +DNL+ K+ +K +
Sbjct: 871 MGGVYYILQDSV---GFDNLMHGKSPKGNQKQRSLEDFVVSLQ 910
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 455 bits (1174), Expect = e-144
Identities = 216/997 (21%), Positives = 374/997 (37%), Gaps = 175/997 (17%)
Query: 17 LEEIKKE-NVDLERIPINEVFEQLKCT-REGLSNEEGQKRLVIFGPNKLEE-KKESKVLK 73
LE +KKE ++ ++ + E+ ++ + + +GLS + L+ GPN L + + +K
Sbjct: 42 LENMKKEMEINDHQLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTPEYVK 101
Query: 74 FLGFMWNPLSWVMEIAAIMAIALA---NGGGKPPDWQDFVGIVVLL---LINSTISFIEE 127
F + L +M +AA + + G + + L+ ++ + +E
Sbjct: 102 FARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQE 161
Query: 128 NNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPL 187
+ N A+ + Q V+RDG + A LV GD++ +K GD +PAD R+L
Sbjct: 162 FKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQGR 221
Query: 188 KIDQSALTGESLPVTKM-------PGDE---VFSGSTCKQGEIEAVVIATGVHTFFGKAA 237
K+D S+LTGES P T+ P + F + C +G + +V+ TG T G+ A
Sbjct: 222 KVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIA 281
Query: 238 HLVDSTNQE--------GHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDN 289
L E HF ++ + +I G I+ M + +
Sbjct: 282 SLASGVENEKTPIAIEIEHFVDIIAGL------AILFGATFFIVAM--CIGYTFLRAMVF 333
Query: 290 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL 349
+ +++ +P + ++V +++ + RL+ + + K + A+E + V+CSDKTGTLT
Sbjct: 334 FMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQ 393
Query: 350 NKLTV-----DKNLVEV----------FVKDMDKDTVILYGA----RASRVENQDAIDAC 390
N++TV D ++ F + + + RA+ QDA+
Sbjct: 394 NRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVP 453
Query: 391 IVGMLGDAKEA-------RAGITELHF---------LPFNPVEKRTAITYIDSDGSWHR- 433
++GDA E + + +PFN K + D R
Sbjct: 454 KRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRH 513
Query: 434 --ISKGAPEQIIELCN----------LREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEK 481
+ KGAPE+++E C+ L E R T G R L + + EK
Sbjct: 514 VLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEK 573
Query: 482 TKESPGGPWQ-----------FVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ--- 527
F GL+ + DPPR + + + G+ V M+TGD
Sbjct: 574 DYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPIT 633
Query: 528 -LAIAKETG---------RRLGMGTNMYPSSALLGQIKDANIS-----ALPVDELIEKAD 572
AIA G + + + I+ + EL+E
Sbjct: 634 AKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEALR 693
Query: 573 G-----FAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADA-TDAAR 626
FA P+ K IV Q I +TGDGVND+PALKKADIG+A+ A +DAA+
Sbjct: 694 THPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAK 753
Query: 627 GASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIY--------AVSITIRIVLGFLLIAL 678
A+D++L + + IV+ V R IF +K Y I I + L
Sbjct: 754 NAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLP-- 811
Query: 679 IWKFDFSPFMVLIIAILNDGT-------------IMTIS-KDRVKPSPVPDTWKLKEIFA 724
+L I + D IM + ++ + V + F
Sbjct: 812 -----LGCITILFIELCTDIFPSVSLAYEKAESDIMHLRPRNPKRDRLVNEPLAAYSYFQ 866
Query: 725 TGIV-----LGTYLAVMTVLFF-----------WAIHSSTFFSEKFGVRSIRDSPHELTA 768
G + Y M + W H + +G
Sbjct: 867 IGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQY 926
Query: 769 ----AVYLQVSIVSQALIFVTRSRSWSFLERPGL---LLIAAFIIAQLVATLIAVYA--- 818
++ + + A + + ++R S ++ +L+ A I+ Q+ Y
Sbjct: 927 TCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIA-IVFQVCIGCFLCYCPGM 985
Query: 819 NFGFARIHGIGWGWVGVIWLYSIVFYIPLDVLKFIVR 855
F I + W V + ++ ++ ++ K VR
Sbjct: 986 PNIF-NFMPIRFQWWLVPMPFGLLIFVYDEIRKLGVR 1021
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 450 bits (1161), Expect = e-143
Identities = 215/1004 (21%), Positives = 385/1004 (38%), Gaps = 188/1004 (18%)
Query: 16 SLEEIKKE-NVDLERIPINEVFEQLKCTRE-GLSNEEGQKRLVIFGPNKLEE-KKESKVL 72
L+E+KKE ++D ++ ++E+ + GL+N ++ L GPN L + +
Sbjct: 36 DLDELKKEVSMDDHKLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWI 95
Query: 73 KFLGFMWNPLSWVMEIAAIMAIAL------ANGGGKPPDWQDFVGIVVLLLINSTISFIE 126
KF ++ S ++ I AI+ + V + ++++ S+ +
Sbjct: 96 KFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQ 155
Query: 127 ENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDP 186
E + + + Q V+RDG A +V GD++ +K GD IPAD R++
Sbjct: 156 EAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHG 215
Query: 187 LKIDQSALTGESLPVTKM-------PGDE---VFSGSTCKQGEIEAVVIATGVHTFFGKA 236
K+D S+LTGES P T+ P + F + C +G VV+ TG T G+
Sbjct: 216 CKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRI 275
Query: 237 AHLVDSTNQE--------GHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGID 288
A L HF ++T +A+ + + ++ I ++ +
Sbjct: 276 ATLASGLEVGRTPIAIEIEHFIHIITG--------VAVFLGVSFFILSLILGYSWLEAVI 327
Query: 289 NLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLT 348
L+ +++ +P + ++V + + + R++++ + K + A+E + +CSDKTGTLT
Sbjct: 328 FLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLT 387
Query: 349 LNKLTV-----DKNLVEV----------FVKDMDKDTVILYGA----RASRVENQDAIDA 389
N++TV D + E F K + + A RA QD +
Sbjct: 388 QNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQDNVPI 447
Query: 390 CIVGMLGDAKEA-------RAGITELHF---------LPFNPVEKRTAITYIDSDGSWHR 433
+ GDA E+ + +PFN K + + S R
Sbjct: 448 LKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESR 507
Query: 434 ---ISKGAPEQIIELCN----------LREDVRNKAHTIIDKFADRGLRSLAVAEQSVPE 480
+ KGAPE+I++ C+ L+ED++ + G R L ++PE
Sbjct: 508 YLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPE 567
Query: 481 K-----------TKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ-- 527
P FVGL+ + DPPR + + + + G+ V M+TGD
Sbjct: 568 DKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPI 627
Query: 528 --LAIAKETG--------------RRLGMGTNMYPSSALLGQIKDANISALPVDELIEKA 571
AIAK G R + P A + +++ L + L +
Sbjct: 628 TAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDIL 687
Query: 572 DG-----FAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADA-TDAA 625
FA P+ K IV Q + I +TGDGVND+PALKKADIG+A+ + +D +
Sbjct: 688 HYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVS 747
Query: 626 RGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIY--------AVSITIRIVLGFLLIA 677
+ A+D++L + + IV+ V R IF +K Y + I+ L
Sbjct: 748 KQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLP- 806
Query: 678 LIWKFDFSPFMVLIIAILNDGT-------------IMTISKDRVKPSPVPDTWKLKEIFA 724
+L I + D IM + +P P T KL
Sbjct: 807 ------LGTVTILCIDLGTDMVPAISLAYEQAESDIM-----KRQPRN-PKTDKLVNERL 854
Query: 725 TGIVLGTYLAVMTVL----FFWAIHSSTF-FSEKFGVRSIRDSPH--------------- 764
+ G + + +F + + F + G R D
Sbjct: 855 ISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYE 914
Query: 765 ------ELTAAVYLQVSIVSQ-ALIFVTRSRSWSFLERP---GLLLIAAFIIAQLVATLI 814
+ +V Q A + + ++R S ++ +L+ + +
Sbjct: 915 QRKIVEFTCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFG--LFEETALAAF 972
Query: 815 AVYA---NFGFARIHGIGWGWVGVIWLYSIVFYIPLDVLKFIVR 855
Y + R++ + W + YS++ ++ ++ +FI+R
Sbjct: 973 LSYCPGTDVAL-RMYPLKPSWWFCAFPYSLIIFLYDEMRRFIIR 1015
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 245 bits (627), Expect = 5e-68
Identities = 96/361 (26%), Positives = 168/361 (46%), Gaps = 38/361 (10%)
Query: 31 PINEVFEQLKCTRE-GLSNEEGQKRLVIFGPNKL-EEKKESKVLKFLGFMWNPLSWVMEI 88
E + GL+ ++ ++ L +G N+L E+ +S + + L ++ +
Sbjct: 9 STEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLL 68
Query: 89 AAIMAIALA---NGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQT 145
AA ++ LA G + + I+++L+ N+ + +E NA NA AL
Sbjct: 69 AACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMG 128
Query: 146 KVLRDGAWREQE--ASILVPGDVISIKLGDIIPADARLLD--GDPLKIDQSALTGESLPV 201
KV R Q A +VPGD++ + +GD +PAD R+L L++DQS LTGES+ V
Sbjct: 129 KVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSV 188
Query: 202 TKMP----------GDE---VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQE-- 246
K D+ +FSG+ G+ +V TGV T GK + +T Q+
Sbjct: 189 IKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAATEQDKT 248
Query: 247 ------GHFQKVLT-AIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIG--- 296
F + L+ I C+ I + P+ ++ G + +
Sbjct: 249 PLQQKLDEFGEQLSKVISLICVAVWLINI---GHFNDPVHGGSWIRGAIYYFKIAVALAV 305
Query: 297 -GIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVD 355
IP +P V++ +A+G+ R++++ AI + + ++E + V+CSDKTGTLT N+++V
Sbjct: 306 AAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVC 365
Query: 356 K 356
K
Sbjct: 366 K 366
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 204 bits (521), Expect = 2e-54
Identities = 133/525 (25%), Positives = 203/525 (38%), Gaps = 100/525 (19%)
Query: 411 LPFNPVEKRTAITYIDSDGSWHR-----ISKGAPEQIIELCN----------LREDVRNK 455
L F+ K ++ + S KGAPE +I+ CN + V+ K
Sbjct: 486 LEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEK 545
Query: 456 AHTIIDKF--ADRGLRSLAVAEQSVPEKTKESPGGPWQ----------FVGLLPLFDPPR 503
++I ++ LR LA+A + P K +E FVG++ + DPPR
Sbjct: 546 ILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPR 605
Query: 504 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSS--ALLGQIKDANISA 561
+ +I+ + G+ V MITGD A RR+G+ + A G
Sbjct: 606 KEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTG----REFDD 661
Query: 562 LPVDELIEKADG---FAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAV 618
LP+ E E FA V P HK +IV LQ I MTGDGVNDAPALKKA+IGIA+
Sbjct: 662 LPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM 721
Query: 619 ADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVS------ITIRIVLG 672
T A+ AS++VL + S IV+AV RAI+ MK + Y +S + I
Sbjct: 722 GSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCI----- 776
Query: 673 FLLIALIWKFDFSPFMVLIIAILNDGT-------------IMTISKDRVKP----SPVPD 715
FL AL P +L + ++ DG IM P P+
Sbjct: 777 FLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIM-----DRPPRSPKEPLIS 831
Query: 716 TWKLKEIFATGIVLGTYLAVMTV-LFFWAI------HSSTFFSEKFGVRSIRDSPHELTA 768
W + +G Y+ TV W T+ ++ D PH
Sbjct: 832 GWLFFRY----MAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGL 887
Query: 769 AVYLQVSIVSQALIFVT------------RSRSWSFLERPGL---LLIAAFIIAQLVATL 813
+ + + S + S + P L+ + I +
Sbjct: 888 DCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGS-ICLSMSLHF 946
Query: 814 IAVYANF--GFARIHGIGWG-WVGVIWLYSIVFYIPLDVLKFIVR 855
+ +Y + ++ + W+ V+ + V + ++LKFI R
Sbjct: 947 LILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGL-DEILKFIAR 990
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 181 bits (463), Expect = 6e-48
Identities = 135/543 (24%), Positives = 219/543 (40%), Gaps = 107/543 (19%)
Query: 129 NAGNAAAALMAGLAPQT-KVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPL 187
G A L+ GL +T V+RDG + GD++ ++ G+ IP D +++G+
Sbjct: 197 RTGEAIKKLV-GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY 255
Query: 188 KIDQSALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV-DSTNQE 246
+D+S ++GE +PV K GDEVF + G ++ G T + LV D+ +
Sbjct: 256 -VDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSK 314
Query: 247 GHFQKVLTAI-GNF--CICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAM- 302
Q++ + F + +AI I Y I H L+ +L+ P A
Sbjct: 315 PPIQRLADKVVAYFIPTVLLVAI---SAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFG 371
Query: 303 ---PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLV 359
PT ++T+ +G + ++ G + K A+E + + DKTGTLT K V
Sbjct: 372 LATPT--ALTVGMG--KGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEV----T 423
Query: 360 EVFVKDMDKDTVILYGARASRVENQ------DAIDACIVGMLGDAKEARAGITELHFLPF 413
++ + D+ ++ A+ E + +AI K+A H +
Sbjct: 424 DLVPLNGDERELL---RLAAIAERRSEHPIAEAI----------VKKALE-----HGIEL 465
Query: 414 NPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNLR------EDVRNKAHTIIDKFADRG 467
EK I G +G I + N R V N+ ++K
Sbjct: 466 GEPEKVEVIA-----G------EGVVADGILVGNKRLMEDFGVAVSNEVELALEKLEREA 514
Query: 468 LRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ 527
++ VA + G++ + D + + ++ +G+ V MITGD
Sbjct: 515 KTAVIVARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDN 561
Query: 528 LAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVR 587
A+ R L +D +I A V P K E V+
Sbjct: 562 WRSAEAISRELN------------------------LDLVI------AEVLPHQKSEEVK 591
Query: 588 KLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLT 647
KLQ K + GDG+NDAPAL +AD+GIAV +D A + DIVL L +V+A+
Sbjct: 592 KLQA-KEVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQL 650
Query: 648 SRA 650
SR
Sbjct: 651 SRK 653
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 176 bits (449), Expect = 2e-46
Identities = 134/559 (23%), Positives = 216/559 (38%), Gaps = 127/559 (22%)
Query: 129 NAGNAAAALMAGLAPQT-KVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPL 187
G A L+ GL +T V+RDG + GD++ ++ G+ IP D +++G+
Sbjct: 119 RTGEAIKKLV-GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES- 176
Query: 188 KIDQSALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFF------------GK 235
+D+S ++GE +PV K GDEVF + G ++ G T K
Sbjct: 177 YVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSK 236
Query: 236 A--AHLVDSTNQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVL 293
L D +F + T + +AI I Y I H L+ +
Sbjct: 237 PPIQRLADKVV--AYF--IPTVLL------VAI---SAFIYWYFIAHAPLLFAFTTLIAV 283
Query: 294 LIGGIPIAM----PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL 349
L+ P A PT ++T+ +G + ++ G + K A+E + + DKTGTLT
Sbjct: 284 LVVACPCAFGLATPT--ALTVGMG--KGAELGILIKNADALEVAEKVTAVIFDKTGTLTK 339
Query: 350 NKLTVDKNLVEVFVKDMDKDTVILYGARASRVENQ------DAIDACIVGMLGDAKEARA 403
K V ++ + D+ ++ A+ E + +AI + A E
Sbjct: 340 GKPEV----TDLVPLNGDERELL---RLAAIAERRSEHPIAEAI-------VKKALEHG- 384
Query: 404 GITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNLR------EDVRNKAH 457
+ EK I +G I + N R V N+
Sbjct: 385 -------IELGEPEKVEVIA-----------GEGVVADGILVGNKRLMEDFGVAVSNEVE 426
Query: 458 TIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLG 517
++K ++ VA + G++ + D + + ++ +G
Sbjct: 427 LALEKLEREAKTAVIVARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMG 473
Query: 518 VNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGV 577
+ V MITGD A+ R L +D +I A V
Sbjct: 474 IKVGMITGDNWRSAEAISRELN------------------------LDLVI------AEV 503
Query: 578 FPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPG 637
P K E V+KLQ K + GDG+NDAPAL +AD+GIAV +D A + DIVL
Sbjct: 504 LPHQKSEEVKKLQA-KEVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDD 562
Query: 638 LSVIVSAVLTSRAIFQRMK 656
L +V+A+ SR ++K
Sbjct: 563 LRDVVAAIQLSRKTMSKIK 581
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 1e-32
Identities = 77/344 (22%), Positives = 127/344 (36%), Gaps = 89/344 (25%)
Query: 325 KRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVENQ 384
+ A E + + DKTGTLT + V ++ + +D ++ A+ +E +
Sbjct: 2 RDRQAFERAKDLQAVIFDKTGTLTEGRFGV----TDIVGFNHSEDELL---QIAASLEAR 54
Query: 385 ------DAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAIT------YIDSDGSWH 432
AI + +A++ VE+ AI ++
Sbjct: 55 SEHPIAAAI-------VEEAEK--------RGFGLTEVEEFRAIPGKGVEGIVNG----R 95
Query: 433 RISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQF 492
R +P I EL +K +G + + + +
Sbjct: 96 RYMVVSPGYIREL---GIKTDESV----EKLKQQGKTVVFILKNG-------------EV 135
Query: 493 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLG 552
G++ L D R +S E I + +G+ M+TGD +AK LG
Sbjct: 136 SGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELG------------- 182
Query: 553 QIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKA 612
+D+ A V P K E V+++Q++ M GDGVNDAPAL +A
Sbjct: 183 -----------LDDYF------AEVLPHEKAEKVKEVQQKYVT-AMVGDGVNDAPALAQA 224
Query: 613 DIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMK 656
D+GIA+ TD A +DIVL + + V SR + +
Sbjct: 225 DVGIAIGAGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFH 268
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 123 bits (312), Expect = 2e-31
Identities = 85/350 (24%), Positives = 133/350 (38%), Gaps = 89/350 (25%)
Query: 319 QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARA 378
+ G + K A+E + + DKTGTLT K V ++ + D+ ++ A
Sbjct: 15 ELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEV----TDLVPLNGDERELL---RLA 67
Query: 379 SRVENQ------DAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWH 432
+ E + +AI K+A H + EK I G
Sbjct: 68 AIAERRSEHPIAEAI----------VKKALE-----HGIELGEPEKVEVIA-----G--- 104
Query: 433 RISKGAPEQIIELCNLR------EDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESP 486
+G I + N R V N+ ++K ++ VA
Sbjct: 105 ---EGVVADGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNG--------- 152
Query: 487 GGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP 546
+ G++ + D + + ++ +G+ V MITGD A+ R L
Sbjct: 153 ----RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN------- 201
Query: 547 SSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDA 606
+D +I A V P K E V+KLQ K + GDG+NDA
Sbjct: 202 -----------------LDLVI------AEVLPHQKSEEVKKLQA-KEVVAFVGDGINDA 237
Query: 607 PALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMK 656
PAL +AD+GIAV +D A + DIVL L +V+A+ SR ++K
Sbjct: 238 PALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 2e-30
Identities = 34/166 (20%), Positives = 70/166 (42%), Gaps = 30/166 (18%)
Query: 491 QFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 550
+ + + D PR + + + + N G+ + +++GD+ KE + L
Sbjct: 126 EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELN----------- 174
Query: 551 LGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALK 610
+ E + + PE K I+ KL++ + M GDGVNDA AL
Sbjct: 175 -------------IQEYY------SNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALA 215
Query: 611 KADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMK 656
AD+ +A+ + D ++ +DI+L + ++ + + + +
Sbjct: 216 LADVSVAMGNGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIP 261
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 3e-28
Identities = 95/373 (25%), Positives = 143/373 (38%), Gaps = 100/373 (26%)
Query: 301 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVE 360
A P S+ + +G + +Q G + K A+E M ++ L DKTGTLT +
Sbjct: 389 ATPM--SIMVGVG--KGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKL----TR 440
Query: 361 VFVKDMDKDTVILYGARASRVENQ------DAIDACIVGMLGDAKEARAGITELHFLPFN 414
+ D +D + A A+ +E+Q +AI + AKE L
Sbjct: 441 IVTDDFVEDNAL---ALAAALEHQSEHPLANAI-------VHAAKEKG--------LSLG 482
Query: 415 PVEKRTAIT------YIDSDGSWHRISKGAP----EQIIELCNLREDVRNKAHTIIDKFA 464
VE A T +D H ++ G E + L E D+
Sbjct: 483 SVEAFEAPTGKGVVGQVDG----HHVAIGNARLMQEHGGDNAPLFEK--------ADELR 530
Query: 465 DRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMIT 524
+G + +A + V LL + DP + + ETI G+ + M+T
Sbjct: 531 GKGASVMFMAVDG-------------KTVALLVVEDPIKSSTPETILELQQSGIEIVMLT 577
Query: 525 GDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYE 584
GD A+ LG + +++ A + PE K
Sbjct: 578 GDSKRTAEAVAGTLG------------------------IKKVV------AEIMPEDKSR 607
Query: 585 IVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSA 644
IV +L+++ I M GDGVNDAPAL KADIGIA+ TD A ++ + L L I A
Sbjct: 608 IVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKA 667
Query: 645 VLTSRAIFQRMKN 657
S + M N
Sbjct: 668 RRLSEST---MSN 677
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 78.0 bits (193), Expect = 7e-15
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 131 GNAAAALMAGLAPQT--KVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLK 188
G+A AL+ L P++ ++ DG+ E + GD++ ++ G+ IP D + +G
Sbjct: 213 GSAIRALL-KLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSF- 270
Query: 189 IDQSALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGV 229
+D+S +TGE +PV K +V + + G V+ A V
Sbjct: 271 VDESMVTGEPIPVAKEASAKVIGATINQTGSF--VMKALHV 309
|
| >2o98_P H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, electrochemical proton G cell turgor, regulation, protein binding; HET: FSC; 2.70A {Nicotiana plumbaginifolia} Length = 52 | Back alignment and structure |
|---|
Score = 101 bits (252), Expect = 2e-26
Identities = 40/52 (76%), Positives = 47/52 (90%)
Query: 911 NNYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 962
N+ EL+++AE+AKRRAE+AR RELHTLKGHVESVVKLKGLDIETIQQ Y +
Sbjct: 1 TNFNELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYDI 52
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 77.9 bits (193), Expect = 2e-17
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 133 AAAALMAGLAPQT-KVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQ 191
A L+ GL +T V+RDG + GD++ ++ G+ IP D +++G+ +D+
Sbjct: 2 AIKKLV-GLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY-VDE 59
Query: 192 SALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGV 229
S ++GE +PV K GDEVF + G + + AT V
Sbjct: 60 SMISGEPVPVLKSKGDEVFGATINNTGVL--KIRATRV 95
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 72.9 bits (180), Expect = 1e-15
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 129 NAGNAAAALMAGLAPQT-KVLRDGAWREQEASILVP------GDVISIKLGDIIPADARL 181
A A L+ L ++ + + V GD+I + G P D R+
Sbjct: 4 TMSEALAKLI-SLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRV 62
Query: 182 LDGDPLKIDQSALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGV 229
++G +D+S +TGE++PV K PG V +GS + G + ++ AT V
Sbjct: 63 IEGHS-MVDESLITGEAMPVAKKPGSTVIAGSINQNGSL--LICATHV 107
|
| >3m50_P N.plumbaginifolia H+-translocating ATPase mRNA; all helical, protein-protein complex, protein binding; HET: EBT; 2.60A {Nicotiana plumbaginifolia} PDB: 3m51_P* Length = 31 | Back alignment and structure |
|---|
Score = 66.5 bits (162), Expect = 2e-14
Identities = 26/30 (86%), Positives = 28/30 (93%)
Query: 933 RELHTLKGHVESVVKLKGLDIETIQQHYTV 962
RELHTLKGHVE+VVKLKGLDIETIQQ Y +
Sbjct: 2 RELHTLKGHVEAVVKLKGLDIETIQQSYDI 31
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 4e-13
Identities = 25/142 (17%), Positives = 52/142 (36%), Gaps = 29/142 (20%)
Query: 385 DAIDACIV--GMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQI 442
+ +D ++ A+ + ++ +PF+ +R ++ ++ + KGA ++I
Sbjct: 34 NLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEI 93
Query: 443 IELCN----------LREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQ- 491
+ +C+ L + + K + D +GLR +AVA TK P
Sbjct: 94 LNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVA-------TKYLPAREGDY 146
Query: 492 ---------FVGLLPLFDPPRH 504
G + D H
Sbjct: 147 QRADESDLILEGYIAFLDHHHH 168
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 68.3 bits (166), Expect = 9e-12
Identities = 64/425 (15%), Positives = 124/425 (29%), Gaps = 123/425 (28%)
Query: 550 LLGQIKDANIS-ALPVDELIEKADGFAG---VFPEHKYEIVR---------KLQERKH-- 594
L+ IK ++ IE+ D VF KY + R L E +
Sbjct: 94 LMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFA--KYNVSRLQPYLKLRQALLELRPAK 151
Query: 595 ---ICGMTGDG--------VNDAPALKKADIGI---AVADATDAARGASDIVLTEPGLSV 640
I G+ G G K D I + + ++ L
Sbjct: 152 NVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSP----ETVLEMLQKLLY 207
Query: 641 IVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGF--------LLI------ALIWK-FDFS 685
+ TSR+ N + SI + LL+ A W F+ S
Sbjct: 208 QIDPNWTSRS--DHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLS 265
Query: 686 -PFMVL-----IIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGTYLAVMTVL 739
++ + L+ T IS D + PD ++K + L
Sbjct: 266 CKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPD--EVKSLLLK--YLDC-------- 313
Query: 740 FFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALI-FVTRSRSWSFLERPGL 798
+D P E+ ++SI+++++ + +W + L
Sbjct: 314 ------------------RPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKL 355
Query: 799 L-LIAAFIIAQLVATLIAVYANFGFARIHGIGWGWVGVIWLYSIVF----YIPLDVLKFI 853
+I + + A ++ VF +IP +L I
Sbjct: 356 TTIIESSLNVLEPAEYRKMFDRLS--------------------VFPPSAHIPTILLSLI 395
Query: 854 VRYALTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQRTLHGLHPPETSELLNDKNNY 913
W +++++ K + E Q + ++ ++ +L N+ +
Sbjct: 396 ---------WFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALH 446
Query: 914 RELSE 918
R + +
Sbjct: 447 RSIVD 451
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 60.3 bits (145), Expect = 3e-09
Identities = 87/679 (12%), Positives = 183/679 (26%), Gaps = 240/679 (35%)
Query: 318 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDK--NLVEVFVKDMDKDTVILYG 375
+ ++K I+ + +GTL L + K +V+ FV+++ + Y
Sbjct: 41 MPKSILSKE--EIDHIIMSK---DAVSGTLRLFWTLLSKQEEMVQKFVEEVLRIN---YK 92
Query: 376 ARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRIS 435
S ++ + + +T + YI+
Sbjct: 93 FLMSPIKTEQ--------------RQPSMMTRM---------------YIEQ-------- 115
Query: 436 KGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGL 495
R++ + FA +V
Sbjct: 116 -----------------RDRLYNDNQVFAKY----------NVS---------------- 132
Query: 496 LPLFDPPRHDSAETIRRAL-----NLGVNVK-MI-TGDQ-LAI--AKETGRRLGMGTNMY 545
R +R+AL V + ++ +G +A+ + M ++
Sbjct: 133 -------RLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIF 185
Query: 546 PSSALLGQIKDANISALPVDELIEKADGFAGVFPEH-----------KYEIVRKLQERKH 594
+ L + +L+ + D +H + E+ R L+ + +
Sbjct: 186 WLN--LKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY 243
Query: 595 -ICGMTGDGVNDAPALKKADIG---------IAVADATDAARGASDIVLTEPGLSVIVSA 644
C + V +A A ++ V D AA + I L S
Sbjct: 244 ENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAAT-TTHISLDH------HSM 296
Query: 645 VLT---SRAIFQRMKNYTIYAVSITIRIVLGF-LLIALIWKFDFSPFMVLIIAILNDGTI 700
LT +++ +K + ++ +++I + DG
Sbjct: 297 TLTPDEVKSLL--LKYLDCRPQDLPREVLTTNPRRLSIIA------------ESIRDG-- 340
Query: 701 MTISKDRVKPSPVPDTWKLKEIFATGI-VLGTY--------LAV--------MTVL-FFW 742
+ KL I + + VL L+V +L W
Sbjct: 341 ----LATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIW 396
Query: 743 AIHSST---FFSEKFGVRSI--RDSPHELTAAVY-LQVSIVSQAL-------IFVTRSRS 789
+ K S+ + P E T ++ + + + + V
Sbjct: 397 FDVIKSDVMVVVNKLHKYSLVEKQ-PKESTISIPSIYLELKVKLENEYALHRSIVDHYNI 455
Query: 790 WSFLERPGLLL------IAAFI--------IAQLVATLIAVYANFGF--ARI--HGIGWG 831
+ L+ + I + + V+ +F F +I W
Sbjct: 456 PKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWN 515
Query: 832 WVGVIW--LYSIVFY---I----PL------DVLKFIVRYALTGKAWDNLLENK------ 870
G I L + FY I P +L F+ + +NL+ +K
Sbjct: 516 ASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIE------ENLICSKYTDLLR 569
Query: 871 TAFTTKKD--YGRGEREAQ 887
A + + + ++ Q
Sbjct: 570 IALMAEDEAIFEEAHKQVQ 588
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.0 bits (134), Expect = 6e-08
Identities = 103/711 (14%), Positives = 200/711 (28%), Gaps = 211/711 (29%)
Query: 19 EIKKENVDLERIPINE--VFEQLKC------TREGLSNEE----------GQKRLVIFGP 60
E + + D+ + + E + C + LS EE L +F
Sbjct: 13 EHQYQYKDI--LSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFW- 69
Query: 61 NKLEEKKESKVLKFLGFMWNP-LSWVMEIAAIMAIALANGGGKPPDWQDFVGIVVLLLIN 119
L K+E V KF+ + ++M + +P
Sbjct: 70 -TLLSKQEEMVQKFVEEVLRINYKFLMS-------PIKTEQRQPSM-------------- 107
Query: 120 STISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADA 179
T +IE+ + L K R Q P + L ++ PA
Sbjct: 108 MTRMYIEQRD------RLYNDNQVFAK---YNVSRLQ------PYLKLRQALLELRPAKN 152
Query: 180 RLLDGDPLKIDQSALTGESL---PVTKMPGDEVF--SGSTCKQGEIEAVVIATGVHTFFG 234
L+DG L ++ + + V ++F + C E ++ ++
Sbjct: 153 VLIDGV-LGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDP 211
Query: 235 KAAHLVD-STNQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVL 293
D S+N + + + ++ + Y N LLVL
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAELRRL------------------LKSKPYENC---LLVL 250
Query: 294 LIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNK-- 351
L + + + L +T R + D L + T ++L+
Sbjct: 251 L----NVQNAKAWNA-FNLSCKIL-----LTTRFKQV-----TDFLSAATTTHISLDHHS 295
Query: 352 --LTVDKNLVEVFVK--DMDKDT-----------VI-LYGAR----ASRVEN-------- 383
LT D+ + +K D + + + +N
Sbjct: 296 MTLTPDEVK-SLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDK 354
Query: 384 -QDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQI 442
I++ + + + E R L P + +I P +
Sbjct: 355 LTTIIESSLNVL--EPAEYRKMFDRLSVFPPS--------AHI-------------PTIL 391
Query: 443 IEL--CNL-REDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLF 499
+ L ++ + DV +++K L E+ E T P +
Sbjct: 392 LSLIWFDVIKSDVMV----VVNKLHKYSL-----VEKQPKESTISIP-------SIYLEL 435
Query: 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANI 559
+ R + D I K + S L+ D
Sbjct: 436 KVKLENEYALHRSIV-----------DHYNIPKT-----------FDSDDLIPPYLDQYF 473
Query: 560 SA-----LPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADI 614
+ L E E+ F VF + ++ + +K++ +G +N LK
Sbjct: 474 YSHIGHHLKNIEHPERMTLFRMVFLDFRF-LEQKIRHDSTAWNASGSILNTLQQLKFYKP 532
Query: 615 GIAVADATDAARGASDIV--LTEPGLSVIVS--AVLTSRAIFQRMKNYTIY 661
I D + I+ L + ++I S L A+ ++ I+
Sbjct: 533 YICDNDPKYERL-VNAILDFLPKIEENLICSKYTDLLRIALMA--EDEAIF 580
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} Length = 168 | Back alignment and structure |
|---|
Score = 46.3 bits (111), Expect = 7e-06
Identities = 13/62 (20%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
Query: 580 EHKYEIVRKLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTE 635
K V + ++ + G+ V+D LK+ + ADA A+ A +
Sbjct: 82 SDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVGYICKC 141
Query: 636 PG 637
G
Sbjct: 142 SG 143
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* Length = 188 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 9e-06
Identities = 29/132 (21%), Positives = 44/132 (33%), Gaps = 36/132 (27%)
Query: 510 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIE 569
IR AL + V +ITG + + ++ LG I
Sbjct: 62 IRCALTSDIEVAIITGRKAKLVEDRCATLG--------------ITHL------------ 95
Query: 570 KADGFAGVFPEHKYEIVRKLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAA 625
+ G +K L E+ I GD + D P ++K + +AVADA
Sbjct: 96 ----YQGQ--SNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLL 149
Query: 626 RGASDIVLTEPG 637
+D V G
Sbjct: 150 IPRADYVTRIAG 161
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* Length = 180 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 1e-05
Identities = 27/132 (20%), Positives = 40/132 (30%), Gaps = 36/132 (27%)
Query: 510 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIE 569
I+ ++ + V +++G I + LG IK
Sbjct: 44 IKMLMDADIQVAVLSGRDSPILRRRIADLG--------------IKLF------------ 77
Query: 570 KADGFAGVFPEHKYEIVRKLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAA 625
F G K L ++ + GD D PA AVADA
Sbjct: 78 ----FLGK--LEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYV 131
Query: 626 RGASDIVLTEPG 637
+ A D VL+ G
Sbjct: 132 KNAVDHVLSTHG 143
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* Length = 164 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 2e-05
Identities = 30/132 (22%), Positives = 42/132 (31%), Gaps = 36/132 (27%)
Query: 510 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIE 569
I A N G+ V ++TG++ I + +L +
Sbjct: 40 IFWAHNKGIPVGILTGEKTEIVRRRAEKLK--------------VDYL------------ 73
Query: 570 KADGFAGVFPEHKYEIVRKLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAA 625
F GV K +L I GD +NDA LK+ I A A
Sbjct: 74 ----FQGV--VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYI 127
Query: 626 RGASDIVLTEPG 637
R S I L + G
Sbjct: 128 RRLSTIFLEKRG 139
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} Length = 211 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 2e-05
Identities = 23/132 (17%), Positives = 39/132 (29%), Gaps = 36/132 (27%)
Query: 510 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIE 569
IR + ++V +ITG + + ++ LG I
Sbjct: 85 IRCLITSDIDVAIITGRRAKLLEDRANTLG--------------ITHL------------ 118
Query: 570 KADGFAGVFPEHKYEIVRKLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAA 625
+ G K +L GD + D P + + + +AVADA
Sbjct: 119 ----YQGQ--SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLL 172
Query: 626 RGASDIVLTEPG 637
+ V G
Sbjct: 173 LPKAHYVTRIKG 184
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} Length = 176 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 2e-05
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 580 EHKYEIVRKLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTE 635
+ K +++ E + I G+ VND P +AVA A D RGA+ V T
Sbjct: 85 DRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTV 144
Query: 636 PG 637
PG
Sbjct: 145 PG 146
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A Length = 189 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 2e-05
Identities = 27/132 (20%), Positives = 47/132 (35%), Gaps = 36/132 (27%)
Query: 510 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIE 569
I+ + GV +I+G + AI + + LG I+
Sbjct: 55 IKMLIASGVTTAIISGRKTAIVERRAKSLG--------------IEHL------------ 88
Query: 570 KADGFAGVFPEHKYEIVRKLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAA 625
F G E K ++ KL + GD + D P +++ +G+AVA+A
Sbjct: 89 ----FQGR--EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAASFV 142
Query: 626 RGASDIVLTEPG 637
R + + G
Sbjct: 143 REHAHGITRAQG 154
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} Length = 162 | Back alignment and structure |
|---|
Score = 44.8 bits (107), Expect = 2e-05
Identities = 25/132 (18%), Positives = 46/132 (34%), Gaps = 36/132 (27%)
Query: 510 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIE 569
I+ +G+ + +I+G A + LG +++
Sbjct: 45 IKLLQKMGITLAVISGRDSAPLITRLKELG--------------VEEI------------ 78
Query: 570 KADGFAGVFPEHKYEIVRKLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAA 625
+ G K EI K++E+ + G GD V D +KK +AV +A +
Sbjct: 79 ----YTGS--YKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEV 132
Query: 626 RGASDIVLTEPG 637
R + + G
Sbjct: 133 RKVAVYITQRNG 144
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} Length = 191 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 2e-05
Identities = 22/132 (16%), Positives = 43/132 (32%), Gaps = 36/132 (27%)
Query: 510 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIE 569
++ + G+ V +IT Q A+ +LG I
Sbjct: 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLG--------------ITHY------------ 88
Query: 570 KADGFAGVFPEHKYEIVRKLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAA 625
+ G K + L++ + GD + D P +++ +G+AV++A
Sbjct: 89 ----YKGQ--VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQV 142
Query: 626 RGASDIVLTEPG 637
+D G
Sbjct: 143 LEFADWRTERTG 154
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} Length = 195 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 3e-05
Identities = 23/132 (17%), Positives = 45/132 (34%), Gaps = 36/132 (27%)
Query: 510 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIE 569
++ +N G+ + +ITG + I + + LG I
Sbjct: 61 VKALMNAGIEIAIITGRRSQIVENRMKALG--------------ISLI------------ 94
Query: 570 KADGFAGVFPEHKYEIVRKLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAA 625
+ G + K + + ++ I G GD + D P ++K + + VAD
Sbjct: 95 ----YQGQ--DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLL 148
Query: 626 RGASDIVLTEPG 637
++ V G
Sbjct: 149 AQRANYVTHIKG 160
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 1e-04
Identities = 29/199 (14%), Positives = 55/199 (27%), Gaps = 31/199 (15%)
Query: 423 TYIDSDGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSL-AVAEQSVPEK 481
T +D + + AP + + L ++ V +K +I + L + ++ +
Sbjct: 16 TITMNDNIINIMKTFAPPEWMAL---KDGVLSKTLSIKEGVGRM-FGLLPSSLKEEITSF 71
Query: 482 TKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 541
E R E + + +I+G +
Sbjct: 72 VLEDA--------------KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEK 117
Query: 542 TNMYPSSALLGQIKDANI---SALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGM 598
+Y + I G K ++ +L E M
Sbjct: 118 DRIY---CNHASFDNDYIHIDWPHSCKGTCSNQCGCC------KPSVIHELSEPNQYIIM 168
Query: 599 TGDGVNDAPALKKADIGIA 617
GD V D A K +D+ A
Sbjct: 169 IGDSVTDVEAAKLSDLCFA 187
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 5e-04
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 577 VFPEHKYEIVRKLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARGASDIV 632
+F K E++ LQ +I + GDG ND K A I IA +A + + +
Sbjct: 138 MFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHC 196
Query: 633 LTEPGLSVI 641
+ EP L++I
Sbjct: 197 INEPDLALI 205
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 7e-04
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
Query: 577 VFPEHKYEIVRKLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARGASDIV 632
+ K EI+ K+ + + I GDG ND KKA + IA A + +DI
Sbjct: 139 LKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADIC 197
Query: 633 LTEPGLSVI 641
+ + L I
Sbjct: 198 IEKRDLREI 206
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 9e-04
Identities = 15/69 (21%), Positives = 27/69 (39%), Gaps = 5/69 (7%)
Query: 577 VFPEHKYEIVRKLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARGASDIV 632
V + K +I+ L ++ + GDG ND + A +G+A A +
Sbjct: 241 VSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTA 299
Query: 633 LTEPGLSVI 641
+ GL +
Sbjct: 300 VRFAGLGGV 308
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 962 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.95 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.95 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.94 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.93 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.93 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.86 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.76 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.36 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.22 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.13 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.1 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.06 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.04 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.02 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.02 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.01 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.97 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.88 | |
| 2o98_P | 52 | H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, | 98.87 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.82 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.77 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.75 | |
| 3m50_P | 31 | N.plumbaginifolia H+-translocating ATPase mRNA; al | 98.74 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.72 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.65 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.63 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.63 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.6 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.6 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.58 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.55 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.54 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.51 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.5 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.49 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.46 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.41 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.41 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.35 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.35 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.35 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.33 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.25 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.18 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.17 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.17 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.15 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.15 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.1 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.08 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.06 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.04 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.03 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.02 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.02 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.0 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.96 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 97.95 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 97.93 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 97.92 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 97.92 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 97.9 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 97.89 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 97.89 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 97.87 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 97.85 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 97.84 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 97.84 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.84 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 97.83 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.82 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.82 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.81 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.8 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 97.79 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.74 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 97.71 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.7 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.7 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.68 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.63 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 97.62 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 97.59 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.57 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 97.56 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.52 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 97.51 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.49 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.48 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.47 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.47 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.46 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.43 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.42 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.41 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.4 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.4 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.39 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.38 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.38 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.32 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 97.31 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.24 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.22 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.22 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.21 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 97.08 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 96.94 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 96.77 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.77 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 96.77 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 96.72 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.69 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 96.66 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 96.61 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.55 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 96.46 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 96.44 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.29 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 96.24 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 95.86 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 95.85 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 95.71 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 95.7 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 95.42 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 95.4 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 95.18 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 95.13 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 94.91 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 94.89 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 94.88 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 94.84 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 94.56 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 94.52 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 94.0 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 93.52 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 92.95 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 92.61 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 91.53 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 91.45 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 90.23 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 88.4 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 87.57 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 85.41 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 84.79 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 81.25 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-147 Score=1364.83 Aligned_cols=877 Identities=85% Similarity=1.311 Sum_probs=744.2
Q ss_pred ChhhhhhcccccccCCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCccccchHHHHHHhhhhhHHHHHHHHHHHHHH
Q 044543 16 SLEEIKKENVDLERIPINEVFEQLKCTREGLSNEEGQKRLVIFGPNKLEEKKESKVLKFLGFMWNPLSWVMEIAAIMAIA 95 (962)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~~l~~~ail~~~ 95 (962)
++++.+++.+|+|.++.+|+++.|+++.+|||++|+++|+++||+|++++++++.|+.|+++|++|+.++++++++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~l~~~~~p~~~il~~aaiis~~ 82 (885)
T 3b8c_A 3 SLEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEMAAIMAIA 82 (885)
T ss_dssp ---------CCCSSSSTTCCTTTSSSCSSCSTHHHHHHHSSSCCSCCTTTTCCCTTSSTTSCCCGGGSSHHHHHHHGGGG
T ss_pred chhhhhhcchhhHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57888889999999999999999999989999999999999999999999888999999999999999999999999998
Q ss_pred HHcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCee
Q 044543 96 LANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDII 175 (962)
Q Consensus 96 l~~~~~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~V 175 (962)
++...+.+.+|.++++|+++++++++++++||+++++++++|++..+++++|+|||++++|++++|+|||+|.|++||+|
T Consensus 83 l~~~~~~~~~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~I 162 (885)
T 3b8c_A 83 LANGDGRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDII 162 (885)
T ss_dssp SSCCTTSCSCCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCC
T ss_pred HHhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEE
Confidence 76555556689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecceEEEecCCeeEecccccCCCeeeecCCCCcccccceeecceEEEEEEEecchhHHHhHHHhhhccCCCChHHHHHHH
Q 044543 176 PADARLLDGDPLKIDQSALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTA 255 (962)
Q Consensus 176 PaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~l~~~~~~ 255 (962)
||||+|++|++++||||+|||||.|+.|.+||.+|+||.+.+|+++++|++||.+|++||+++++++..+++++|+.+++
T Consensus 163 PaDg~ll~g~~l~VdES~LTGES~Pv~K~~g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~lq~~~~~ 242 (885)
T 3b8c_A 163 PADARLLEGDPLKVDQSALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 242 (885)
T ss_dssp SSCCCCCCSSCBCCCCCSTTCCSSCCCBSSCCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCSCSCCSTTTTTTHH
T ss_pred eeceEEEEcCcccccccccCCCCcceEecCCCccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhcccccChHHHHHHH
Confidence 99999999987899999999999999999999999999999999999999999999999999999877788999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCcccccCchHHhhcC
Q 044543 256 IGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAG 335 (962)
Q Consensus 256 i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~ 335 (962)
++.+++..+++++++.+++.|...+.+|.+++..++++++++|||+||+++++++++|+.+|+++|+++|+++++|+||+
T Consensus 243 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~ilvk~~~aiE~Lg~ 322 (885)
T 3b8c_A 243 IGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAG 322 (885)
T ss_dssp HHHHHHHHHHHHHHHHSTTTTTTTCSCSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCCCSSGGGHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCeEeCCchHHHHHhC
Confidence 98875554443333323334444456788899999999999999999999999999999999999999999999999999
Q ss_pred ceEEEecccccccCCceEEEEEeeeecccCCChHHHHHHHHHhccccCCChHHHHHHHhhcChhhhhcCceEeeecCCCC
Q 044543 336 MDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNP 415 (962)
Q Consensus 336 v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pF~s 415 (962)
+|+||||||||||+|+|+|.++.++.+..+.++++++.+++.|+...++||+|.|++.++.++.+.+..++.++.+||+|
T Consensus 323 v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ll~~aa~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~pF~s 402 (885)
T 3b8c_A 323 MDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNP 402 (885)
T ss_dssp CCCCEEECCCCCSCCCCCCCSCCCCSSCSSTTHHHHHHHHHHHCCSSSCCSHHHHHHHTTCCTTCCCCSSCCBCCCCCCT
T ss_pred CCEEEECCCCCcccCceEEEEEEEeccCCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHhhchhhHhhcCceeecccCCc
Confidence 99999999999999999998654334445667888899998888766789999999999877655667788899999999
Q ss_pred CCceEEEEEEcCCCCEEEEEeCcHHHHHHHhccchHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEE
Q 044543 416 VEKRTAITYIDSDGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGL 495 (962)
Q Consensus 416 ~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~ 495 (962)
.+|||++++++.+|+.+.++|||||.++++|+.+++.++.+.+.+++++++|+|++++|++++++.+.+..|++++|+|+
T Consensus 403 ~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~~~~~e~~l~~lGl 482 (885)
T 3b8c_A 403 VDKRTALTYIDGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGL 482 (885)
T ss_dssp TTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSSSSCCCCCCCCCEE
T ss_pred ccceEEEEEEecCCcEEEEEeCCHHHHHHhccCchhhHHHHHHHHHHHHhCCCeEEEEEEeccccccccccccCcEEEEE
Confidence 99999998887788888999999999999998665666778888999999999999999999988777788999999999
Q ss_pred eecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEE
Q 044543 496 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFA 575 (962)
Q Consensus 496 i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a 575 (962)
++++||||+|++++|++|+++||+|+|+|||++.||.++|+++||..+..+...+.|.+.+..+++.++++++++.++||
T Consensus 483 i~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~a 562 (885)
T 3b8c_A 483 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFA 562 (885)
T ss_dssp EEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEE
T ss_pred EEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEE
Confidence 99999999999999999999999999999999999999999999987655666777877766688889999999999999
Q ss_pred ecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHHHHHHHHHHH
Q 044543 576 GVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRM 655 (962)
Q Consensus 576 rvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i 655 (962)
|++|+||.++|+.||++|++|+|+|||+||+||||+||||||||+|+|+|+++||+++++++|++|++++++||++|+||
T Consensus 563 rv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni 642 (885)
T 3b8c_A 563 GVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRM 642 (885)
T ss_dssp CCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCSSSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHH
T ss_pred EECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeCCccHHHHHhcceeeccCchhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHhhhchhccccCCCCCCCCCCccchHHHHHHHHHHHHHHHH
Q 044543 656 KNYTIYAVSITIRIVLGFLLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGTYLAV 735 (962)
Q Consensus 656 ~~~i~~~~~~ni~~~l~~~~~~~~~~~~~~p~~il~i~l~~~~~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 735 (962)
++++.|++++|+..++.+++..++++++++|++++|+++++|++++++++|+.+|+++|++|..++++..+++.|+++++
T Consensus 643 ~~~i~~~l~~n~~~~~~~~~~~~~~~~~l~p~~il~i~l~~d~~~l~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~ 722 (885)
T 3b8c_A 643 KNYTIYAVSITIRIVFGFMLIALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYQAI 722 (885)
T ss_dssp HHHHHHHHHHTTTTTSTTHHHHSSCSSCSCHHHHHHHHHHHHTTTCCCCCCCCCCSSCCCSTTTTTTTTTHHHHHSSTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCcCcCHHHHHHHHHHHHHHHHhhcccccCcccCCcchhHHHHHHHHHHHHHHHHH
Confidence 99999999999977666667777888999999999999999999999999999999999999998888888899999999
Q ss_pred HHHHHHHHHHhhccccccccccccCCChhHHHHHHHHHHHHHHHHHHhhhccCCCCcccchhHHHHHHHHHHHHHHHHHH
Q 044543 736 MTVLFFWAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLERPGLLLIAAFIIAQLVATLIA 815 (962)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 815 (962)
.++++|++.+.+++++..++.+...+...+.++++|+.++++.++++|++|+++++++++|++++++++++.+++.++++
T Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~Rs~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 802 (885)
T 3b8c_A 723 MTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTRSRSWSFVERPGALLMIAFLIAQLIATLIA 802 (885)
T ss_dssp HHTTSSSCTTTTTTTTCCCCSSCCGGGTHHHHTTTTTTTSSTTGGGTTCSSSCTTTSTTSTTTTTSGGGSSTTTTTTSSS
T ss_pred HHHHHHHHHHHcCccccccCcccccchHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccCccHHHHHHHHHHHHHHHHHH
Confidence 99987776654444443344322211234566777777777777789999999998889998777777766666666666
Q ss_pred HhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhhhcccccccccCCchhhhhhHHHhh
Q 044543 816 VYANFGFARIHGIGWGWVGVIWLYSIVFYIPLDVLKFIVRYALTGKAWDNLLENKTAFTTKKDYGRGEREAQWALAQ 892 (962)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 892 (962)
+|.++.++.+.+++|.||+++|+++++++++.|+.|++.|+.+.+.+|+++.+++.+++.++++++++|+.+|+.+.
T Consensus 803 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (885)
T 3b8c_A 803 VYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIRYILSGKAWLNLFENKTAFTMKKDYGKEEREAQWMRGS 879 (885)
T ss_dssp SSCCCCSSCCCCCTTTTHHHHHHHTGGGTHHHHHHHHHHTTC-----------------------------------
T ss_pred HhccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccHhhhhccccccccchhcccccccccccccc
Confidence 77666666788999999999999999999999999999999999999999999999999999999999999998764
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-130 Score=1218.79 Aligned_cols=804 Identities=38% Similarity=0.616 Sum_probs=693.0
Q ss_pred HHHcCCC-CCCCCHHHHHHHHhhcCCCccCccccchHHHHHHhhhhhHHHHHHHHHHHHHHHHcCCCCCCChhhHHHHHH
Q 044543 36 FEQLKCT-REGLSNEEGQKRLVIFGPNKLEEKKESKVLKFLGFMWNPLSWVMEIAAIMAIALANGGGKPPDWQDFVGIVV 114 (962)
Q Consensus 36 ~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~~~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~~~~~~~~~~~~i~~ 114 (962)
.+.|+++ .+|||++|+++|+++||+|+++++++++|..|+++|++|++++++++++++++++ +|.++++|++
T Consensus 77 ~~~l~t~~~~GLs~~ea~~r~~~~G~N~l~~~~~~~~~~~l~~f~~~~~~ll~~aai~s~~~g-------~~~~~~~i~~ 149 (920)
T 1mhs_A 77 EDMLQTDTRVGLTSEEVVQRRRKYGLNQMKEEKENHFLKFLGFFVGPIQFVMEGAAVLAAGLE-------DWVDFGVICG 149 (920)
T ss_dssp STTTTTCCCCCCCSHHHHHHHHHTSSSSCCCCCCSSHHHHTHHHHHHHHHHHHHHHHHCTTCS-------CSSHHHHHHH
T ss_pred HHHhCCCcCCCCCHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hHHHHHHHHH
Confidence 3457776 5899999999999999999999888999999999999999999999999998864 8999999999
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCeeecceEEEecCC-eeEeccc
Q 044543 115 LLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDP-LKIDQSA 193 (962)
Q Consensus 115 ~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~-~~Vdes~ 193 (962)
+++++++++++||+++++++++|++..+++++|+|||++++|++++|||||+|.|++||+|||||+|++|++ +.||||+
T Consensus 150 vv~i~~~i~~~qe~~a~~a~~~L~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~~l~VDES~ 229 (920)
T 1mhs_A 150 LLLLNAVVGFVQEFQAGSIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSA 229 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESSCCEEBCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecCceeeeeccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999985 8999999
Q ss_pred ccCCCeeeecCCCCcccccceeecceEEEEEEEecchhHHHhHHHhhhccC-CCChHHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 194 LTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QEGHFQKVLTAIGNFCICSIAIGMVIEI 272 (962)
Q Consensus 194 LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~-~~~~l~~~~~~i~~~~~~~i~~~~~~~~ 272 (962)
|||||.|+.|.+||.+|+||.+.+|.+.++|++||.+|++||++++++++. +++++|+.+++++.++++++++++++.+
T Consensus 230 LTGES~PV~K~~gd~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~ 309 (920)
T 1mhs_A 230 LTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVW 309 (920)
T ss_dssp TSSCCCCEECCSSCEECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcceEecCCCeeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998764 7899999999999876655444333322
Q ss_pred HHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCcccccCchHHhhcCceEEEecccccccCCce
Q 044543 273 IVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL 352 (962)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m 352 (962)
+ .+...+.++...+..++++++++|||+||++++++++.|+.+|+++|+++|+++++|+||++|+||||||||||+|+|
T Consensus 310 ~-~~~~~~~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m 388 (920)
T 1mhs_A 310 V-SSFYRSNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKL 388 (920)
T ss_dssp H-TTTTTTCCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCS
T ss_pred H-HHHhcCCcHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCeEEecCchhhhhccCcEEEECCCCCccccce
Confidence 2 222334578888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeeeecccCCChHHHHHHHHHhccccCC--ChHHHHHHHhhcCh---hhhhcCceEeeecCCCCCCceEEEEEEcC
Q 044543 353 TVDKNLVEVFVKDMDKDTVILYGARASRVENQ--DAIDACIVGMLGDA---KEARAGITELHFLPFNPVEKRTAITYIDS 427 (962)
Q Consensus 353 ~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~--~~~~~al~~~~~~~---~~~~~~~~~l~~~pF~s~~kr~sv~~~~~ 427 (962)
+|.++.. ..+.++++++..++.|+..... ||+|.|++.++.+. ......++.++++||+|.+|+|+++++.+
T Consensus 389 ~v~~~~~---~~g~~~~~ll~~a~l~~~~~~~~~~P~e~Al~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~iv~~~ 465 (920)
T 1mhs_A 389 SLHDPYT---VAGVDPEDLMLTACLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESP 465 (920)
T ss_dssp CCCCCBC---CSCCCCTHHHHHHHHSCCCSSCSCCSHHHHHHHHHHHSSSCCGGGSCCCEEEEEEEETTTTEEEEEECCS
T ss_pred eEEEEee---cCCCCHHHHHHHHHHhcCCcccCCChHHHHHHHHHHhcccchhhccccceeEEeeccCCCCeEEEEEEeC
Confidence 9988653 2345666777777766654444 99999999876321 22345688999999999999999999877
Q ss_pred CCCEEEEEeCcHHHHHHHhcc----chHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCCCC
Q 044543 428 DGSWHRISKGAPEQIIELCNL----REDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPR 503 (962)
Q Consensus 428 ~g~~~~~~KGa~e~il~~~~~----~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr 503 (962)
+|+.+.++|||||.++++|+. +++.++.+.+.+++++++|+|++++|++. .|++|+|+|+++++||||
T Consensus 466 ~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~--------~e~~l~~lGli~i~Dp~R 537 (920)
T 1mhs_A 466 QGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKR--------GEGSWEILGIMPCMDPPR 537 (920)
T ss_dssp SSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCS--------SSCSCCCCBBCCCCCCCC
T ss_pred CCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEec--------cccccEEEEEEEEecccc
Confidence 888889999999999999975 34556778889999999999999999984 156899999999999999
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCC--cccccccchhccCCcchHHHHhhhcceEEecCHhh
Q 044543 504 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP--SSALLGQIKDANISALPVDELIEKADGFAGVFPEH 581 (962)
Q Consensus 504 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~q 581 (962)
+|++++|++|+++||+|+|+|||++.||.+||+++||..+..+ ...+.|. ..++++++.+.+++.++|||++|+|
T Consensus 538 ~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~---~~~~~~el~~~~~~~~V~arv~P~~ 614 (920)
T 1mhs_A 538 HDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGG---GDMPGSEVYDFVEAADGFAEVFPQH 614 (920)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBC---CCGGGGGGGTTTTTTSCEESCCSTH
T ss_pred ccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCc---ccCCHHHHHHHHhhCeEEEEeCHHH
Confidence 9999999999999999999999999999999999999753221 1233343 3566778888888999999999999
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 044543 582 KYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIY 661 (962)
Q Consensus 582 K~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~ 661 (962)
|.++|+.||++|++|+|+|||+||+||||+||||||||+|+|+|+++||+|+++++|++|+.++++||++|+||++++.|
T Consensus 615 K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~ 694 (920)
T 1mhs_A 615 KYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVY 694 (920)
T ss_dssp HHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEETTSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccccccHHHHHhcCeEEcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHhhhchhccccCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHH
Q 044543 662 AVSITIRIVLGFLLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDTWKLKEIFATGIVLGTYLAVMTVLFF 741 (962)
Q Consensus 662 ~~~~ni~~~l~~~~~~~~~~~~~~p~~il~i~l~~~~~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 741 (962)
.++.|+...+.+.....+++++++|.+++|+++++|++.+++++|+.+++++|++|+.++++..+++.|+++++.+++.|
T Consensus 695 ~l~~n~~~~~~~~~~~~~~~~~l~~~~il~~~l~~d~~~lal~~e~~~~~~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~ 774 (920)
T 1mhs_A 695 RIALSIHLEIFLGLWIAILNRSLNIELVVFIAIFADVATLAIAYDNAPYSQTPVKWNLPKLWGMSVLLGVVLAVGTWITV 774 (920)
T ss_dssp HHHHHHHHHHHHHHHHHSCSCCCCHHHHHHHHHHHTTHHHHCCCCCSGGGGSCCCCCSSSCSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHhhhhcccCcccccCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999876444444445567779999999999999998899999998888888888887777777888999998888766
Q ss_pred HHHHhhccccccccccccCCChhHHHHHHHHHHHHHHHHHHhhhccCCCCcccchhHHHHHHHHHHHHHHHHHHHhhccc
Q 044543 742 WAIHSSTFFSEKFGVRSIRDSPHELTAAVYLQVSIVSQALIFVTRSRSWSFLERPGLLLIAAFIIAQLVATLIAVYANFG 821 (962)
Q Consensus 742 ~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 821 (962)
++.+..+ ...+ ....+.+.+|++|+++++++.+++|++|+.+++|...+++++++++++.+++.++++++ +
T Consensus 775 ~~~~~~~---~~~~---~~~~~~~~~T~~f~~lv~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 845 (920)
T 1mhs_A 775 TTMYAQG---ENGG---IVQNFGNMDEVLFLQISLTENWLIFITRANGPFWSSIPSWQLSGAIFLVDILATCFTIW---G 845 (920)
T ss_dssp HHHTTTT---TTCC---SSSSSSSHHHHHHHHHHHHHHHHTTSSSCSSSCSCCSCTHHHHHHHHHHHHHHHHHHSS---S
T ss_pred HHHHHhc---cccc---ccchhhHHHHHHHHHHHHHHHHHHHHhccchhhhcCchHHHHHHHHHHHHHHHHHHHHh---h
Confidence 5543210 0011 11123468899999999999999999999888777778888888888887776666433 3
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhhhcccc
Q 044543 822 FARIHGIGWGWVGVIWLYSIVFYIPLDVLKFIVRYALTGKAWDNLLENKTAF 873 (962)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~~~~~~~~~~~~~ 873 (962)
++...+++|.+|+.+|+++++++++.++.|++.++. ..|+++.++++..
T Consensus 846 ~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~---~~fd~~~~~~~~~ 894 (920)
T 1mhs_A 846 WFEHSDTSIVAVVRIWIFSFGIFCIMGGVYYILQDS---VGFDNLMHGKSPK 894 (920)
T ss_dssp STTSCSHHHHTHHHHHHHTTHHHHHHHHHHHCCCCC---CTTHHHHHHHSTT
T ss_pred hhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhh---HHHHHHhccCccc
Confidence 667789999999999999999999999999876554 3566666665543
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-124 Score=1184.08 Aligned_cols=839 Identities=23% Similarity=0.376 Sum_probs=687.3
Q ss_pred Chhhhhhc-ccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCcc-ccchHHHHHHhhhhhHHHHHHHHHHH
Q 044543 16 SLEEIKKE-NVDLERIPINEVFEQLKCT-REGLSNEEGQKRLVIFGPNKLEEK-KESKVLKFLGFMWNPLSWVMEIAAIM 92 (962)
Q Consensus 16 ~~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~-~~~~~~~~l~~~~~~~~~~l~~~ail 92 (962)
++++++++ .+++|.++.+|+++.|+++ .+|||++|+++|+++||+|+++.+ +.++|+.|++||++|+++++++++++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~l 115 (1028)
T 2zxe_A 36 DLDELKKEVSMDDHKLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAIL 115 (1028)
T ss_dssp -CCTTTTSCCCCCSSSCHHHHHHHHTCCSSSCBCHHHHHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHH
T ss_pred hHHHHhhhcCcchhhCCHHHHHHHhCcCccCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHH
Confidence 35566665 7799999999999999998 689999999999999999999976 47889999999999999999999999
Q ss_pred HHHHHc-----CC-CCCCChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcE
Q 044543 93 AIALAN-----GG-GKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDV 166 (962)
Q Consensus 93 ~~~l~~-----~~-~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDi 166 (962)
+++++. +. ....+|+++++|+++++++++++++||+|+++++++|+++.+++++|+|||++++|++++||||||
T Consensus 116 s~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDi 195 (1028)
T 2zxe_A 116 CFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDL 195 (1028)
T ss_dssp HHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGCCTTCE
T ss_pred HHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEECCEEEEEEHHHCCcCCE
Confidence 987641 11 112357788889999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCeeecceEEEecCCeeEecccccCCCeeeecCCCC----------cccccceeecceEEEEEEEecchhHHHhH
Q 044543 167 ISIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTKMPGD----------EVFSGSTCKQGEIEAVVIATGVHTFFGKA 236 (962)
Q Consensus 167 I~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g~----------~v~~Gs~v~~G~~~~~V~~tG~~T~~gki 236 (962)
|.|++||+|||||+|++|++|+||||+|||||.|+.|.+++ ++|+||.+.+|.++++|++||.+|.+||+
T Consensus 196 V~l~~Gd~IPaD~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i 275 (1028)
T 2zxe_A 196 VEVKGGDRIPADLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRI 275 (1028)
T ss_dssp EEEETTCBCCSEEEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHH
T ss_pred EEECCCCEeeceEEEEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHH
Confidence 99999999999999999977999999999999999999876 49999999999999999999999999999
Q ss_pred HHhhhcc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHH
Q 044543 237 AHLVDST-NQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 315 (962)
Q Consensus 237 ~~l~~~~-~~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~ 315 (962)
++++..+ .+++++|+.+++++.++..+.++.+++.+++.+ +.+.+|..++.+++++++++|||+||+++++++++++.
T Consensus 276 ~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~ 354 (1028)
T 2zxe_A 276 ATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSL-ILGYSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAK 354 (1028)
T ss_dssp HHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHH
T ss_pred HHhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HccCcHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHH
Confidence 9999876 578999999999988766554443333333322 23557888888999999999999999999999999999
Q ss_pred HHhcCCcccccCchHHhhcCceEEEecccccccCCceEEEEEeeee--cccC------------CCh--HHHHHHHHHhc
Q 044543 316 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEV--FVKD------------MDK--DTVILYGARAS 379 (962)
Q Consensus 316 ~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~--~~~~------------~~~--~~~l~~a~~~~ 379 (962)
+|+++|++||+++++|+||++|+||||||||||+|+|+|.++.+.. +... .++ +.++..++.|+
T Consensus 355 ~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~alc~ 434 (1028)
T 2zxe_A 355 RMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCN 434 (1028)
T ss_dssp HHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHHHHHHHSC
T ss_pred HHhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999986521 1000 011 25666677664
Q ss_pred cc---------------cCCChHHHHHHHhhcC----hhhhhcCceEeeecCCCCCCceEEEEEEcC---CCCEEEEEeC
Q 044543 380 RV---------------ENQDAIDACIVGMLGD----AKEARAGITELHFLPFNPVEKRTAITYIDS---DGSWHRISKG 437 (962)
Q Consensus 380 ~~---------------~~~~~~~~al~~~~~~----~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~---~g~~~~~~KG 437 (962)
.. ..+||+|.|++.++.. ....+..++.++.+||+|.+|||+++++.. +|++..++||
T Consensus 435 ~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KG 514 (1028)
T 2zxe_A 435 RAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKG 514 (1028)
T ss_dssp CCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEE
T ss_pred CCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHHHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeC
Confidence 21 1248999999987743 333456788999999999999999999864 5788999999
Q ss_pred cHHHHHHHhcc----------chHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCC-----------CCCCCCceEEEEe
Q 044543 438 APEQIIELCNL----------REDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTK-----------ESPGGPWQFVGLL 496 (962)
Q Consensus 438 a~e~il~~~~~----------~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~-----------~~~e~~l~llG~i 496 (962)
|||.|+++|.. +++.++.+.+.+++|+++|+|||++||++++++++ +..|.+++|+|++
T Consensus 515 A~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i 594 (1028)
T 2zxe_A 515 APERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLM 594 (1028)
T ss_dssp CHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCSSEEEEEEE
T ss_pred CcHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhhhhhhcCeEEEeee
Confidence 99999999963 34567788889999999999999999998865321 2347899999999
Q ss_pred ecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCC----------------------cccccccc
Q 044543 497 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP----------------------SSALLGQI 554 (962)
Q Consensus 497 ~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~----------------------~~~l~~~~ 554 (962)
+++||||+|++++|++|+++||+|+|+|||++.||.++|++|||..+... ..++.|..
T Consensus 595 ~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~ 674 (1028)
T 2zxe_A 595 AMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSD 674 (1028)
T ss_dssp EEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHH
T ss_pred ccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHH
Confidence 99999999999999999999999999999999999999999999743211 11233332
Q ss_pred hhccCCcchHHHHhhhcc--eEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEcc-CchHHHHhcccc
Q 044543 555 KDANISALPVDELIEKAD--GFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDI 631 (962)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~--v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg-~gt~~a~~aaDi 631 (962)
. ..++++++++++.+.. +|||++|+||.++|+.+|+.|++|+|+|||+||+||||+|||||||| +|+|+|+++||+
T Consensus 675 l-~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~ 753 (1028)
T 2zxe_A 675 L-KDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADM 753 (1028)
T ss_dssp H-TTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSE
T ss_pred h-hhCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCE
Confidence 2 2345667778877775 99999999999999999999999999999999999999999999999 799999999999
Q ss_pred cccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhcCCchHHHHHHHHHHhhhc-hhccccCCCC
Q 044543 632 VLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIAL-IWKFDFSPFMVLIIAILNDGT-IMTISKDRVK 709 (962)
Q Consensus 632 vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~~~-~~~~~~~p~~il~i~l~~~~~-~~~l~~d~~~ 709 (962)
|+.+++|++|++++++||++|+|+++++.|.+++|+..++.+++..+ ..+.+++|+|++|+|+++|++ .+++++|++.
T Consensus 754 Vl~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~qil~inl~~d~~pa~al~~e~~~ 833 (1028)
T 2zxe_A 754 ILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMVPAISLAYEQAE 833 (1028)
T ss_dssp EETTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHHHHHHHHTTTTHHHHHHGGGCCCS
T ss_pred EecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHHhccCccc
Confidence 99999999999999999999999999999999999987766655443 467899999999999999985 6889998865
Q ss_pred CC---CCCC-----ccchHHHHHH-HHHHHHHHHHHHHHHHHHHHh-hccccc--------cccc--ccc----CC----
Q 044543 710 PS---PVPD-----TWKLKEIFAT-GIVLGTYLAVMTVLFFWAIHS-STFFSE--------KFGV--RSI----RD---- 761 (962)
Q Consensus 710 ~~---~~~~-----~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~-~~~~~~--------~~g~--~~~----~~---- 761 (962)
++ ++|+ +...++.+.. .+..|+++++++|+.|++.+. .++.+. ++.. ... ..
T Consensus 834 ~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (1028)
T 2zxe_A 834 SDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTY 913 (1028)
T ss_dssp SCGGGSCCCCTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEECH
T ss_pred hhhhccCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhccccccccccccccccch
Confidence 43 1232 2223344444 456799999988877665432 122100 0000 000 00
Q ss_pred -----ChhHHHHHHHHHHHHHHHHHHhhhccCCCCccc--chhHHHHHHHHHHHHHHHHHHHhhc--cccccccchhHHH
Q 044543 762 -----SPHELTAAVYLQVSIVSQALIFVTRSRSWSFLE--RPGLLLIAAFIIAQLVATLIAVYAN--FGFARIHGIGWGW 832 (962)
Q Consensus 762 -----~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 832 (962)
...+.+|++|+++++++.++.|++|+++.+++. .+|+++++++++..++..++ +|.+ ..++.+.+++|.+
T Consensus 914 ~~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~-~~~p~~~~~f~~~~l~~~~ 992 (1028)
T 2zxe_A 914 EQRKIVEFTCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETALAAFL-SYCPGTDVALRMYPLKPSW 992 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSSCHHHHCSCCHHHHHHHHHHHHHHHHH-HHSTTHHHHTCCCCCCGGG
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHccCCcchhccCCcCHHHHHHHHHHHHHHHHH-HHhhhHHhhhcCCCCCHHH
Confidence 012578999999999999999999998754322 45667777777666655544 4533 2355678888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Q 044543 833 VGVIWLYSIVFYIPLDVLKFIVRYA 857 (962)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~K~~~r~~ 857 (962)
|+++++++++.++..++.|++.|++
T Consensus 993 w~~~~~~~~~~~~~~e~~k~~~r~~ 1017 (1028)
T 2zxe_A 993 WFCAFPYSLIIFLYDEMRRFIIRRS 1017 (1028)
T ss_dssp GGTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 8888999999999999999987765
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-123 Score=1180.85 Aligned_cols=842 Identities=23% Similarity=0.359 Sum_probs=687.5
Q ss_pred CCChhhhhhc-ccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-cchHHHHHHhhhhhHHHHHHHHH
Q 044543 14 GISLEEIKKE-NVDLERIPINEVFEQLKCT-REGLSNEEGQKRLVIFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEIAA 90 (962)
Q Consensus 14 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~~a 90 (962)
+.+++++|+| .+++|.++.+|+++.|+++ .+|||++|+++|+++||+|++++++ .+.|+.|++||++|+++++++++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa 118 (1034)
T 3ixz_A 39 KEKLENMKKEMEINDHQLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAA 118 (1034)
T ss_pred hhhHHHHhhhcCcchhhCCHHHHHHHhCCCcccCCCHHHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHH
Confidence 3467888888 7899999999999999998 4799999999999999999998765 57899999999999999999999
Q ss_pred HHHHHHHc-----CC-CCCCChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCC
Q 044543 91 IMAIALAN-----GG-GKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPG 164 (962)
Q Consensus 91 il~~~l~~-----~~-~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~G 164 (962)
+++++... +. .....|+++++|+++++++++++++||+|+++++++|+++.+++++|+|||++++|++++||||
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~G 198 (1034)
T 3ixz_A 119 AICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVG 198 (1034)
T ss_pred HHHHHHHHHhhccCCCccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCC
Confidence 99887531 11 1123578888899999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeCCCeeecceEEEecCCeeEecccccCCCeeeecCCC----------CcccccceeecceEEEEEEEecchhHHH
Q 044543 165 DVISIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTKMPG----------DEVFSGSTCKQGEIEAVVIATGVHTFFG 234 (962)
Q Consensus 165 DiI~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g----------~~v~~Gs~v~~G~~~~~V~~tG~~T~~g 234 (962)
|||.|++||+|||||+|++|+++.||||+|||||.|+.|.++ |++|+||.+.+|.+.++|++||.+|.+|
T Consensus 199 DiV~l~~Gd~VPAD~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~G 278 (1034)
T 3ixz_A 199 DLVEMKGGDRVPADIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIG 278 (1034)
T ss_pred cEEEEcCCceecCCeEEEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhh
Confidence 999999999999999999998899999999999999999875 5689999999999999999999999999
Q ss_pred hHHHhhhcc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHH
Q 044543 235 KAAHLVDST-NQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIG 313 (962)
Q Consensus 235 ki~~l~~~~-~~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~ 313 (962)
|++++++.. .+++++|+.+++++.++..++++++++.++ .+...+.+|..++..++++++++|||+||++++++++++
T Consensus 279 kI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~ 357 (1034)
T 3ixz_A 279 RIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFI-VAMCIGYTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLT 357 (1034)
T ss_pred HHHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcchHHHHHHHHHHHHHheeccccHHHHHHHHHHH
Confidence 999999876 578999999999988765444433333222 233446778899999999999999999999999999999
Q ss_pred HHHHhcCCcccccCchHHhhcCceEEEecccccccCCceEEEEEeeeecccC-----------C--C---hHHHHHHHHH
Q 044543 314 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKD-----------M--D---KDTVILYGAR 377 (962)
Q Consensus 314 ~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~-----------~--~---~~~~l~~a~~ 377 (962)
+.+|+++|++||+++++|+||++++||||||||||+|+|+|.++++...... . + ...++..++.
T Consensus 358 ~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 437 (1034)
T 3ixz_A 358 AKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTL 437 (1034)
T ss_pred HHHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999865311000 0 0 1245555565
Q ss_pred hccc---------------cCCChHHHHHHHhhc----ChhhhhcCceEeeecCCCCCCceEEEEEEcC---CCCEEEEE
Q 044543 378 ASRV---------------ENQDAIDACIVGMLG----DAKEARAGITELHFLPFNPVEKRTAITYIDS---DGSWHRIS 435 (962)
Q Consensus 378 ~~~~---------------~~~~~~~~al~~~~~----~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~---~g~~~~~~ 435 (962)
|+.. ..+||.|.|++.++. +....+..++.++.+||+|.+|||++++... +|++..++
T Consensus 438 c~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~ 517 (1034)
T 3ixz_A 438 CNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVM 517 (1034)
T ss_pred hccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHHHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEE
Confidence 5432 124789999988763 3344567888999999999999998887643 37889999
Q ss_pred eCcHHHHHHHhcc----------chHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCC-----------CCCCCCceEEE
Q 044543 436 KGAPEQIIELCNL----------REDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTK-----------ESPGGPWQFVG 494 (962)
Q Consensus 436 KGa~e~il~~~~~----------~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~-----------~~~e~~l~llG 494 (962)
|||||.|+++|+. +++.++.+.+.+++++.+|+|||++||+.+++++. +..|.+++|+|
T Consensus 518 KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG 597 (1034)
T 3ixz_A 518 KGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAG 597 (1034)
T ss_pred eCChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhhhccccCcEEEE
Confidence 9999999999963 34567788899999999999999999998875421 23578999999
Q ss_pred EeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCC----------------------cccccc
Q 044543 495 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP----------------------SSALLG 552 (962)
Q Consensus 495 ~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~----------------------~~~l~~ 552 (962)
+++++||||++++++|++|+++||+|+|+|||++.||.++|+++||..+... ...+.|
T Consensus 598 lv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g 677 (1034)
T 3ixz_A 598 LVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVING 677 (1034)
T ss_pred EEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEec
Confidence 9999999999999999999999999999999999999999999999653210 012222
Q ss_pred cchhccCCcchHHHHhhhc--ceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEcc-CchHHHHhcc
Q 044543 553 QIKDANISALPVDELIEKA--DGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARGAS 629 (962)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~--~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg-~gt~~a~~aa 629 (962)
... ..++++++++.+.+. .+|||++|+||.++|+.+|+.|++|+|+|||+||+||||+|||||||| +|+|+||++|
T Consensus 678 ~~l-~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aA 756 (1034)
T 3ixz_A 678 MQL-KDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAA 756 (1034)
T ss_pred Hhh-hhCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhc
Confidence 222 234555666666655 499999999999999999999999999999999999999999999999 9999999999
Q ss_pred cccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhcCCchHHHHHHHHHHhhhc-hhccccCC
Q 044543 630 DIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIA-LIWKFDFSPFMVLIIAILNDGT-IMTISKDR 707 (962)
Q Consensus 630 Divl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~~-~~~~~~~~p~~il~i~l~~~~~-~~~l~~d~ 707 (962)
|+|+.++++++|+.++++||++|+|++|++.|.+++|+..++.++++. +..+.|++|+|++|+|+++|++ ++++++|+
T Consensus 757 D~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~palal~~e~ 836 (1034)
T 3ixz_A 757 DMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEK 836 (1034)
T ss_pred CEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999999999999998776655544 4467899999999999999986 79999988
Q ss_pred CCCC---CCCC-----ccchHHHHHH-HHHHHHHHHHHHHHHHHHHHh-hccccc-ccccc---------ccCC------
Q 044543 708 VKPS---PVPD-----TWKLKEIFAT-GIVLGTYLAVMTVLFFWAIHS-STFFSE-KFGVR---------SIRD------ 761 (962)
Q Consensus 708 ~~~~---~~~~-----~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~-~~~~~~-~~g~~---------~~~~------ 761 (962)
+.+. ++|+ +...++++.. .+..|+++++.+++.|++.+. .++.+. .++.. +..+
T Consensus 837 ~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (1034)
T 3ixz_A 837 AESDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEW 916 (1034)
T ss_pred CChhhhhCCCCCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccccccccccccccccccccccccccc
Confidence 7543 1222 2223344444 345699999888877665442 222211 01110 0000
Q ss_pred -------ChhHHHHHHHHHHHHHHHHHHhhhccCCCCccc---chhHHHHHHHHHHHHHHHHHHHhhc--cccccccchh
Q 044543 762 -------SPHELTAAVYLQVSIVSQALIFVTRSRSWSFLE---RPGLLLIAAFIIAQLVATLIAVYAN--FGFARIHGIG 829 (962)
Q Consensus 762 -------~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 829 (962)
.....+|++|.++++++.++.|+.|+++.+.+. ..|+++++++++..++..++ .|.+ ..++.+.+++
T Consensus 917 ~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~s~~~~~~~~N~~l~~~~~~~~~l~~~~-~~~p~~~~~f~~~~l~ 995 (1034)
T 3ixz_A 917 TFGQRLYQQYTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFL-CYCPGMPNIFNFMPIR 995 (1034)
T ss_pred chhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCCcccccCCcccHHHHHHHHHHHHHHHHH-HHhhhHHHHhcCCCCC
Confidence 012367999999999999999999997744332 23557777766665554443 4443 2456778889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 044543 830 WGWVGVIWLYSIVFYIPLDVLKFIVRYAL 858 (962)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~K~~~r~~~ 858 (962)
|.+|+++++++++.++++|+.|++.|++.
T Consensus 996 ~~~w~~~~~~~~~~~~~~e~~K~~~r~~~ 1024 (1034)
T 3ixz_A 996 FQWWLVPMPFGLLIFVYDEIRKLGVRCCP 1024 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999988764
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-120 Score=1151.99 Aligned_cols=832 Identities=26% Similarity=0.346 Sum_probs=670.2
Q ss_pred ccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-cchHHHHHHhhhhhHHHHHHHHHHHHHHHHcCC---
Q 044543 26 DLERIPINEVFEQLKCT-REGLSNEEGQKRLVIFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEIAAIMAIALANGG--- 100 (962)
Q Consensus 26 ~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~~--- 100 (962)
++|.++.+|+++.|+++ .+|||++|+++|+++||+|++++++ +++|+.|++||++|++++++++++++++++...
T Consensus 4 ~~~~~~~~~~~~~l~~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~ 83 (995)
T 3ar4_A 4 AAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGE 83 (995)
T ss_dssp TGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred hhhhCCHHHHHHHhCCCcccCCCHHHHHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 56899999999999997 5799999999999999999999865 688999999999999999999999999875321
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCe--EEEEECcCcCCCcEEEEeCCCeeecc
Q 044543 101 GKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGA--WREQEASILVPGDVISIKLGDIIPAD 178 (962)
Q Consensus 101 ~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~--~~~i~~~~Lv~GDiI~l~~Gd~VPaD 178 (962)
++...|.+++.|++++++++++++++|+|+++++++|++..+++++|+|||+ +++|++++|||||+|.|++||+||||
T Consensus 84 ~~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD 163 (995)
T 3ar4_A 84 ETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPAD 163 (995)
T ss_dssp GGGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSE
T ss_pred cchhhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCccccc
Confidence 1123788889999999999999999999999999999999999999999987 69999999999999999999999999
Q ss_pred eEEEe--cCCeeEecccccCCCeeeecCCC-------------CcccccceeecceEEEEEEEecchhHHHhHHHhhhcc
Q 044543 179 ARLLD--GDPLKIDQSALTGESLPVTKMPG-------------DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 243 (962)
Q Consensus 179 ~~ll~--g~~~~Vdes~LTGEs~pv~K~~g-------------~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~ 243 (962)
|+|++ +.+|+||||+|||||.|+.|.++ |.+|+||.+.+|+++++|++||.+|++||++++++.+
T Consensus 164 ~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~ 243 (995)
T 3ar4_A 164 IRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAAT 243 (995)
T ss_dssp EEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHTC
T ss_pred EEEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHhhcC
Confidence 99965 45689999999999999999987 6899999999999999999999999999999999876
Q ss_pred -CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-c----cccchH----hHHHHHHHHHHhccCCchHHHHHHHHHHH
Q 044543 244 -NQEGHFQKVLTAIGNFCICSIAIGMVIEIIVMYP-I----QHRAYR----NGIDNLLVLLIGGIPIAMPTVLSVTMAIG 313 (962)
Q Consensus 244 -~~~~~l~~~~~~i~~~~~~~i~~~~~~~~~~~~~-~----~~~~~~----~~~~~~l~lli~~iP~aL~~~~~i~~~~~ 313 (962)
.+++++|+.+++++.++..++++++++.+++.+. . .+.+|. ..+..++++++++|||+||++++++++.+
T Consensus 244 ~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~ 323 (995)
T 3ar4_A 244 EQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALG 323 (995)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCHHHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHH
Confidence 5789999999999988665554433333322221 1 111232 34557788999999999999999999999
Q ss_pred HHHHhcCCcccccCchHHhhcCceEEEecccccccCCceEEEEEeeee--cc------------cCCCh-----------
Q 044543 314 SHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEV--FV------------KDMDK----------- 368 (962)
Q Consensus 314 ~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~--~~------------~~~~~----------- 368 (962)
+.+|+++|+++|+++++|+||++|+||||||||||+|+|+|.++.+.. +. ..+.+
T Consensus 324 ~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 403 (995)
T 3ar4_A 324 TRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPI 403 (995)
T ss_dssp HHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEEETTEEC
T ss_pred HHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCCccccccccccc
Confidence 999999999999999999999999999999999999999999886521 00 00000
Q ss_pred --------HHHHHHHHHhcccc------------CCChHHHHHHHhhcCh-------h-------------hhhcCceEe
Q 044543 369 --------DTVILYGARASRVE------------NQDAIDACIVGMLGDA-------K-------------EARAGITEL 408 (962)
Q Consensus 369 --------~~~l~~a~~~~~~~------------~~~~~~~al~~~~~~~-------~-------------~~~~~~~~l 408 (962)
..++..++.|+... .+||+|.|++.++.+. . ..+..|+.+
T Consensus 404 ~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 483 (995)
T 3ar4_A 404 RSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKE 483 (995)
T ss_dssp CGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHHHHHHEEEE
T ss_pred cccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCccccccccccccccccchhhhhhhCceE
Confidence 12344455554321 1589999998765321 0 123568899
Q ss_pred eecCCCCCCceEEEEEEcCCC-----CEEEEEeCcHHHHHHHhcc----------chHHHHHHHHHHHHH--HhcCCeEE
Q 044543 409 HFLPFNPVEKRTAITYIDSDG-----SWHRISKGAPEQIIELCNL----------REDVRNKAHTIIDKF--ADRGLRSL 471 (962)
Q Consensus 409 ~~~pF~s~~kr~sv~~~~~~g-----~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~~i~~~--a~~GlR~L 471 (962)
+.+||+|++|||+++++.++| +...++|||||.|+++|+. +++.++.+.+.+++| +++|+|||
T Consensus 484 ~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvL 563 (995)
T 3ar4_A 484 FTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCL 563 (995)
T ss_dssp EEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEEE
T ss_pred EEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHhhhccceEE
Confidence 999999999999999987666 6789999999999999963 245567788899999 99999999
Q ss_pred EEEeecCCCCC----------CCCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCC
Q 044543 472 AVAEQSVPEKT----------KESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 541 (962)
Q Consensus 472 ~~A~~~~~~~~----------~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~ 541 (962)
++||++++..+ ++..|++++|+|+++++||+|+|++++|+.|+++||+++|+|||+..||.++|+++||.
T Consensus 564 a~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~ 643 (995)
T 3ar4_A 564 ALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIF 643 (995)
T ss_dssp EEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSS
T ss_pred EEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcC
Confidence 99999886432 12347899999999999999999999999999999999999999999999999999997
Q ss_pred CCCC--CcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEcc
Q 044543 542 TNMY--PSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVA 619 (962)
Q Consensus 542 ~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg 619 (962)
.... ...++.|... ..++++++.+++.+..+|||++|+||.++|+.+|++|+.|+|+|||+||+||||+||||||||
T Consensus 644 ~~~~~i~~~~~~g~~~-~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiamg 722 (995)
T 3ar4_A 644 GENEEVADRAYTGREF-DDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG 722 (995)
T ss_dssp CTTCCCTTTEEEHHHH-HTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEET
T ss_pred CCCCcccceEEEchhh-hhCCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEeC
Confidence 5321 1234455443 355667788888899999999999999999999999999999999999999999999999999
Q ss_pred CchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhcCCchHHHHHHHHHHhhh
Q 044543 620 DATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLIA-LIWKFDFSPFMVLIIAILNDG 698 (962)
Q Consensus 620 ~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~l~~~~~~-~~~~~~~~p~~il~i~l~~~~ 698 (962)
+|+++|+++||+++.+++|+.|++++++||++|+||++++.|++++|+..++.++++. +.++.++.|+|++|+|+++|+
T Consensus 723 ~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~~~pl~~~qil~~nl~~d~ 802 (995)
T 3ar4_A 723 SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDG 802 (995)
T ss_dssp TSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTTTH
T ss_pred CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998776655544 445678999999999999997
Q ss_pred c-hhccccCCCCCC-------CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcc-----ccc-cccc-----c
Q 044543 699 T-IMTISKDRVKPS-------PVPDTWKLKEIFATGIVLGTYLAVMTVLFFWAIHS--STF-----FSE-KFGV-----R 757 (962)
Q Consensus 699 ~-~~~l~~d~~~~~-------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~-----~~~-~~g~-----~ 757 (962)
+ ++++++++.++. ++.++...+..+...++.|+++++++++.|++.+. .+. ... .++. .
T Consensus 803 ~p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 882 (995)
T 3ar4_A 803 LPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHP 882 (995)
T ss_dssp HHHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGGGCSSCSSCCS
T ss_pred HHHHhhccCCCChhHHhCCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhccccccccccc
Confidence 5 788998875432 22223333444555567799998888765443221 000 000 0000 0
Q ss_pred ccC----C--ChhHHHHHHHHHHHHHHHHHHhhhccCCCCcc--c-chhHHHHHHHHHHHHHHHHHHHhhc--ccccccc
Q 044543 758 SIR----D--SPHELTAAVYLQVSIVSQALIFVTRSRSWSFL--E-RPGLLLIAAFIIAQLVATLIAVYAN--FGFARIH 826 (962)
Q Consensus 758 ~~~----~--~~~~~~t~~~~~~~~~~~~~~~~~r~~~~~~~--~-~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~ 826 (962)
... . .....+|++|..+++++.++.+++|+.+.+++ . .+++++++++++..++..++ +|.+ ..++.+.
T Consensus 883 ~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~-~~~p~~~~~f~~~ 961 (995)
T 3ar4_A 883 HFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLI-LYVDPLPMIFKLK 961 (995)
T ss_dssp CCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHH-HHSTHHHHHTTCC
T ss_pred cccccccccccchhhhhHHHHHHHHHHHHHHHHhhccccchhccCCccCHHHHHHHHHHHHHHHHH-HHHHHHHHhhccC
Confidence 000 0 02357899999999999999999998663222 1 23557777766665544433 4443 2345677
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 044543 827 GIGWGWVGVIWLYSIVFYIPLDVLKFIVRYALT 859 (962)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~ 859 (962)
+++|..|+++++++++.+++++++|++.|+++.
T Consensus 962 ~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~~~ 994 (995)
T 3ar4_A 962 ALDLTQWLMVLKISLPVIGLDEILKFIARNYLE 994 (995)
T ss_dssp CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHSCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 888888888899999999999999999887653
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-84 Score=791.46 Aligned_cols=524 Identities=23% Similarity=0.358 Sum_probs=454.9
Q ss_pred CChhhHH-HHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEE-CCeEEEEECcCcCCCcEEEEeCCCeeecceEE
Q 044543 104 PDWQDFV-GIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLR-DGAWREQEASILVPGDVISIKLGDIIPADARL 181 (962)
Q Consensus 104 ~~~~~~~-~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~R-dg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~l 181 (962)
..|++.+ +|+++++++..++.+.++|+.+++++|++..+++++|+| ||++++|++++|+|||+|.|++||+|||||+|
T Consensus 185 ~~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~v 264 (736)
T 3rfu_A 185 AVYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEV 264 (736)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEE
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEE
Confidence 3455554 677888999999999999999999999999999999988 99999999999999999999999999999999
Q ss_pred EecCCeeEecccccCCCeeeecCCCCcccccceeecceEEEEEEEecchhHHHhHHHhhhcc-CCCChHHHHHHHHHHHH
Q 044543 182 LDGDPLKIDQSALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQEGHFQKVLTAIGNFC 260 (962)
Q Consensus 182 l~g~~~~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~ 260 (962)
++|+ +.||||+|||||.|+.|.+|+.+|+||.+.+|.++++|++||.+|.+||+.++++++ .+++++|+.++++..++
T Consensus 265 l~G~-~~VDES~LTGES~Pv~K~~gd~v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~ 343 (736)
T 3rfu_A 265 QEGR-SFVDESMVTGEPIPVAKEASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWF 343 (736)
T ss_dssp CSSC-EEEECSSSTTCSSCEEECTTCEECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHH
T ss_pred EECc-eEeeecccCCccccEEeccCCcCCCceEeccceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHH
Confidence 9995 789999999999999999999999999999999999999999999999999999876 57899999999999887
Q ss_pred HHHHHHHHHHHHHHHhhccc-cchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCcccccCchHHhhcCceEE
Q 044543 261 ICSIAIGMVIEIIVMYPIQH-RAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVL 339 (962)
Q Consensus 261 ~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i 339 (962)
+..+++++++.+++++.... ..+..++..++++++++|||+|++++|+++..+..+++++|+++|+++++|+||++|+|
T Consensus 344 v~~vl~ia~~~~~~w~~~~~~~~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i 423 (736)
T 3rfu_A 344 VPAVILVAVLSFIVWALLGPQPALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTL 423 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSSSTTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCEE
Confidence 76666555554444443322 24778899999999999999999999999999999999999999999999999999999
Q ss_pred EecccccccCCceEEEEEeeeecccCCChHHHHHHHHHhccccCCChHHHHHHHhhcChhhhhcCceEeeecCCCCCCce
Q 044543 340 CSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKR 419 (962)
Q Consensus 340 ~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pF~s~~kr 419 (962)
|||||||||+|+|+|.++. ..+.++++++.+++..+... +||++.|++.++.+. ++......+|++..++
T Consensus 424 ~fDKTGTLT~g~~~v~~i~----~~~~~~~~~l~~aa~le~~s-~hPla~Aiv~~a~~~-----~~~~~~~~~f~~~~g~ 493 (736)
T 3rfu_A 424 VVDKTGTLTEGHPKLTRIV----TDDFVEDNALALAAALEHQS-EHPLANAIVHAAKEK-----GLSLGSVEAFEAPTGK 493 (736)
T ss_dssp EECCBTTTBCSSCEEEEEE----ESSSCHHHHHHHHHHHHHSS-CCHHHHHHHHHHHTT-----CCCCCCCSCCCCCTTT
T ss_pred EEeCCCCCcCCceEEEEEE----ecCCCHHHHHHHHHHHhhcC-CChHHHHHHHHHHhc-----CCCccCcccccccCCc
Confidence 9999999999999999876 24567888888887766554 499999999987532 2333345678887776
Q ss_pred EEEEEEcCCCCEEEEEeCcHHHHHHHhccchHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecC
Q 044543 420 TAITYIDSDGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLF 499 (962)
Q Consensus 420 ~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~ 499 (962)
.... ..+|+ .+.+|+++.+.+..... +...+..++++.+|+|++++|++. +++|+++++
T Consensus 494 gv~~--~~~g~--~~~~G~~~~~~~~~~~~----~~~~~~~~~~~~~G~~vl~va~d~-------------~~~G~i~i~ 552 (736)
T 3rfu_A 494 GVVG--QVDGH--HVAIGNARLMQEHGGDN----APLFEKADELRGKGASVMFMAVDG-------------KTVALLVVE 552 (736)
T ss_dssp EEEE--CSSSS--CEEEESHHHHHHHCCCC----HHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEEE
T ss_pred eEEE--EECCE--EEEEcCHHHHHHcCCCh----hHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEEee
Confidence 5332 23554 46789999877654332 234566788999999999999854 899999999
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCH
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFP 579 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP 579 (962)
|++|++++++|++|+++|++++|+|||+..+|.++|+++||. .++++++|
T Consensus 553 D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~------------------------------~v~a~~~P 602 (736)
T 3rfu_A 553 DPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIK------------------------------KVVAEIMP 602 (736)
T ss_dssp CCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCC------------------------------CEECSCCH
T ss_pred ccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC------------------------------EEEEecCH
Confidence 999999999999999999999999999999999999999984 37999999
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHH
Q 044543 580 EHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYT 659 (962)
Q Consensus 580 ~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i 659 (962)
+||.++|+.||++|+.|+|+|||.||+|||++||||||||+|+|+++++||+++.+++++.++.++++||++|+||++++
T Consensus 603 ~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl 682 (736)
T 3rfu_A 603 EDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNL 682 (736)
T ss_dssp HHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEESSSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEeCCccHHHHHhCCEEEccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHh-hcCCchHHHH
Q 044543 660 IYAVSITIRIVLGFLLIALI-WKFDFSPFMV 689 (962)
Q Consensus 660 ~~~~~~ni~~~l~~~~~~~~-~~~~~~p~~i 689 (962)
.|++.+|+..+....+..+. +++.++|+.-
T Consensus 683 ~~a~~yN~~~iplAag~l~p~~G~~l~P~~a 713 (736)
T 3rfu_A 683 FFAFIYNVLGVPLAAGVLYPLTGLLLSPMIA 713 (736)
T ss_dssp HHHHHHHHHHHHHHHTSSTTTSSCCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchhhHHHH
Confidence 99999998765544332222 3555677643
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-83 Score=774.51 Aligned_cols=527 Identities=24% Similarity=0.361 Sum_probs=445.4
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCeeecceEEEec
Q 044543 105 DWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDG 184 (962)
Q Consensus 105 ~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g 184 (962)
+|..++.+++++++...++.+.++|+.+++++|++..+++++|+|||++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 95 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G 174 (645)
T 3j08_A 95 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG 174 (645)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEEC
Confidence 34456667777888888888888888889999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEecccccCCCeeeecCCCCcccccceeecceEEEEEEEecchhHHHhHHHhhhcc-CCCChHHHHHHHHHHHHHHH
Q 044543 185 DPLKIDQSALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQEGHFQKVLTAIGNFCICS 263 (962)
Q Consensus 185 ~~~~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~ 263 (962)
.+.||||+|||||.|+.|++||.+|+||.+.+|.++++|++||.+|.+||+.++++++ .+++++|+.++++..+++..
T Consensus 175 -~~~VdeS~LTGES~Pv~K~~g~~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~ 253 (645)
T 3j08_A 175 -ESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPT 253 (645)
T ss_dssp -CEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHH
T ss_pred -cEEEEcccccCCCCceecCCCCEeeccEEEecCcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999999999999999999999999999887 47899999999999887766
Q ss_pred HHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCcccccCchHHhhcCceEEEecc
Q 044543 264 IAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 343 (962)
Q Consensus 264 i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DK 343 (962)
+++++++.+++++...+.++..++..++++++++|||+|++++|+++..+..+++++|+++|+++++|+||++|++||||
T Consensus 254 vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDK 333 (645)
T 3j08_A 254 VLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDK 333 (645)
T ss_dssp HHHHHHHHHHCSSCCCSCSCCCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEG
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcC
Confidence 65544444444433334566777888999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCceEEEEEeeeecccCCChHHHHHHHHHhccccCCChHHHHHHHhhcChhhhhcCceEeeecCCCCCCceEEEE
Q 044543 344 TGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAIT 423 (962)
Q Consensus 344 TGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~ 423 (962)
|||||+|+|+|.++.. .+.++++++.+++.++... +||++.|++.++.+.. ++.....+|++...+....
T Consensus 334 TGTLT~~~~~v~~~~~----~~~~~~~~l~~aa~~e~~s-~hPla~Aiv~~a~~~g-----~~~~~~~~~~~~~g~g~~~ 403 (645)
T 3j08_A 334 TGTLTKGKPEVTDLVP----LNGDERELLRLAAIAERRS-EHPIAEAIVKKALEHG-----IELGEPEKVEVIAGEGVVA 403 (645)
T ss_dssp GGTSSSSCCEEEEEEE----SSSCHHHHHHHHHHHHTTC-CSHHHHHHHHHHHHTT-----CCCCSCCCCEEETTTEEEE
T ss_pred cccccCCCeEEEEEEe----CCCCHHHHHHHHHHHhhcC-CChhHHHHHHHHHhcC-----CCcCCccceEEecCCceEE
Confidence 9999999999999764 2467788888888776654 4999999998875321 1111111222221111100
Q ss_pred EEcCCCCEEEEEeCcHHHHHHHhccchHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCCCC
Q 044543 424 YIDSDGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPR 503 (962)
Q Consensus 424 ~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr 503 (962)
..+.+|+++.+.+... +.++...+.+++++.+|+|+++++++. +++|+++++|++|
T Consensus 404 --------~~v~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~l~va~~~-------------~~~G~i~~~D~l~ 459 (645)
T 3j08_A 404 --------DGILVGNKRLMEDFGV---AVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAVSDTLK 459 (645)
T ss_dssp --------TTEEEECHHHHHHTTC---CCCHHHHHHHHHHHTTTCCCEEEEETT-------------EEEEEEEEECCCT
T ss_pred --------EEEEECCHHHHHhcCC---CccHHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEEecCCch
Confidence 2367899887655322 223456777889999999999999854 9999999999999
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHH
Q 044543 504 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKY 583 (962)
Q Consensus 504 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~ 583 (962)
++++++|++|+++|++++|+|||+..+|.++|+++|+. .+|++++|+||.
T Consensus 460 ~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------------~~~~~~~P~~K~ 509 (645)
T 3j08_A 460 ESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------LVIAEVLPHQKS 509 (645)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------EEECSCCTTCHH
T ss_pred hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC------------------------------EEEEeCCHHhHH
Confidence 99999999999999999999999999999999999984 479999999999
Q ss_pred HHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 584 EIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAV 663 (962)
Q Consensus 584 ~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~ 663 (962)
++|+.+|++ +.|+|+|||.||+|||++||||||||+|+|+++++||+++.+++++.+++++++||++|+|+++++.|++
T Consensus 510 ~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~ 588 (645)
T 3j08_A 510 EEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWAL 588 (645)
T ss_dssp HHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEECCCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEeCCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-HHhhcCCchHHHHHHHHHHhh
Q 044543 664 SITIRIVLGFLLI-ALIWKFDFSPFMVLIIAILND 697 (962)
Q Consensus 664 ~~ni~~~l~~~~~-~~~~~~~~~p~~il~i~l~~~ 697 (962)
++|+..+...++. ..++++.++|+.-.+.-.+.+
T Consensus 589 ~~N~~~i~la~~~~~~~~g~~l~p~~a~~~m~~ss 623 (645)
T 3j08_A 589 IYNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSS 623 (645)
T ss_dssp HHHHHHHHHHTTTTTTTCCCSCCHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHhHhhhcccccCHHHHHHHHhcch
Confidence 9998654433222 223455788875444433333
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-82 Score=780.30 Aligned_cols=527 Identities=24% Similarity=0.361 Sum_probs=446.2
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCeeecceEEEec
Q 044543 105 DWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDG 184 (962)
Q Consensus 105 ~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g 184 (962)
+|..++.+++++++...++.+.++|+.+++++|++..+++++|+|||++++|++++|+|||+|.|++||+|||||+|++|
T Consensus 173 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G 252 (723)
T 3j09_A 173 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG 252 (723)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEEC
Confidence 34456667777888888888888888899999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEecccccCCCeeeecCCCCcccccceeecceEEEEEEEecchhHHHhHHHhhhcc-CCCChHHHHHHHHHHHHHHH
Q 044543 185 DPLKIDQSALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQEGHFQKVLTAIGNFCICS 263 (962)
Q Consensus 185 ~~~~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~ 263 (962)
.+.||||+|||||.|+.|.+||.+|+||.+.+|.++++|++||.+|.+||+.++++++ .+++++|+.++++..+++..
T Consensus 253 -~~~VdeS~LTGES~pv~K~~g~~v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~ 331 (723)
T 3j09_A 253 -ESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPT 331 (723)
T ss_dssp -CEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHH
T ss_pred -CeEEecccccCCCcceeecCCCeeccceEEecCcEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999999999999999999999999999887 48899999999999887766
Q ss_pred HHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCcccccCchHHhhcCceEEEecc
Q 044543 264 IAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 343 (962)
Q Consensus 264 i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DK 343 (962)
+++++++.+++++...+.++..++..++++++++|||+|++++|+++..+..+++++|+++|+++++|+||++|++||||
T Consensus 332 vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDK 411 (723)
T 3j09_A 332 VLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDK 411 (723)
T ss_dssp HHHHHHHHHTTSCSSTTCTTCCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEH
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcC
Confidence 65544444443333334567778999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCceEEEEEeeeecccCCChHHHHHHHHHhccccCCChHHHHHHHhhcChhhhhcCceEeeecCCCCCCceEEEE
Q 044543 344 TGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAIT 423 (962)
Q Consensus 344 TGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~ 423 (962)
|||||+|+|+|.++... +.++++++.+++.++... +||++.|++.++.+.. +......+|.+...+....
T Consensus 412 TGTLT~g~~~v~~~~~~----~~~~~~~l~~aa~~e~~s-~hP~~~Ai~~~a~~~~-----~~~~~~~~~~~~~g~g~~~ 481 (723)
T 3j09_A 412 TGTLTKGKPEVTDLVPL----NGDERELLRLAAIAERRS-EHPIAEAIVKKALEHG-----IELGEPEKVEVIAGEGVVA 481 (723)
T ss_dssp HHHTSCSCCEEEEEEES----SSCHHHHHHHHHHHHTTC-CSHHHHHHHHHHHHTT-----CCCCSCCCCEEETTTEEEE
T ss_pred CCccccCceEEEEEEeC----CCCHHHHHHHHHHHhccC-CCchhHHHHHHHHhcC-----CCcCCccceEEecCCceEE
Confidence 99999999999997642 467788888888776654 4999999998875321 1111111222211111100
Q ss_pred EEcCCCCEEEEEeCcHHHHHHHhccchHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCCCC
Q 044543 424 YIDSDGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPR 503 (962)
Q Consensus 424 ~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr 503 (962)
..+.+|+++.+.+... +..+...+.+++++.+|+|+++++++. +++|+++++|++|
T Consensus 482 --------~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~va~~~-------------~~~G~i~i~D~~~ 537 (723)
T 3j09_A 482 --------DGILVGNKRLMEDFGV---AVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAVSDTLK 537 (723)
T ss_dssp --------TTEEEECHHHHHHTTC---CCCHHHHHHHHHHHTTTCEEEEEEETT-------------EEEEEEEEECCSC
T ss_pred --------EEEEECCHHHHHhcCC---CccHHHHHHHHHHHhcCCeEEEEEECC-------------EEEEEEeecCCcc
Confidence 2367899887655322 223456777889999999999999854 9999999999999
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHH
Q 044543 504 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKY 583 (962)
Q Consensus 504 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~ 583 (962)
++++++|++|+++|++++|+|||+..+|.++|+++|+. .+|++++|+||.
T Consensus 538 ~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~------------------------------~~~~~~~P~~K~ 587 (723)
T 3j09_A 538 ESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------LVIAEVLPHQKS 587 (723)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------EEECSCCTTCHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc------------------------------EEEccCCHHHHH
Confidence 99999999999999999999999999999999999984 479999999999
Q ss_pred HHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 584 EIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAV 663 (962)
Q Consensus 584 ~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~ 663 (962)
++|+.+|++ +.|+|+|||.||+|||++||||||||+|+|+++++||+++.+++++.++.++++||++|+|+++++.|++
T Consensus 588 ~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~ 666 (723)
T 3j09_A 588 EEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWAL 666 (723)
T ss_dssp HHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEECCCCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEeCCCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-HHhhcCCchHHHHHHHHHHhh
Q 044543 664 SITIRIVLGFLLI-ALIWKFDFSPFMVLIIAILND 697 (962)
Q Consensus 664 ~~ni~~~l~~~~~-~~~~~~~~~p~~il~i~l~~~ 697 (962)
++|+..+...++. ..++++.++|+.-.+...+.+
T Consensus 667 ~~n~~~i~~a~~~~~~~~g~~l~p~~a~~~m~~ss 701 (723)
T 3j09_A 667 IYNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSS 701 (723)
T ss_dssp HHHHHHHHHHHHTTSSCCCCSCCHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHhhhhccccccCHHHHHHHHhccH
Confidence 9998754433222 223556788875444433333
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-33 Score=305.92 Aligned_cols=259 Identities=21% Similarity=0.334 Sum_probs=200.6
Q ss_pred HHHHHhcCCcccccCchHHhhcCceEEEecccccccCCceEEEEEeeeecccCCChHHHHHHHHHhccccCCChHHHHHH
Q 044543 313 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVENQDAIDACIV 392 (962)
Q Consensus 313 ~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~ 392 (962)
++.+++++|+++|+++++|.|+++++||||||||||+|+|.+.++. ++++++.+++..+.. +.||+..|+.
T Consensus 5 a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~--------~~~~~l~~~~~~e~~-s~hp~a~ai~ 75 (263)
T 2yj3_A 5 LYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI--------GDSLSLAYAASVEAL-SSHPIAKAIV 75 (263)
Confidence 4578999999999999999999999999999999999999987642 345666666655543 4589999988
Q ss_pred HhhcChhhhhcCceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhccchHHHHHHHHHHHHHHhcCCeEEE
Q 044543 393 GMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLA 472 (962)
Q Consensus 393 ~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~ 472 (962)
.++.+........+....++-.+.+. .+ ++ ..+..|+++ +|.+ +.
T Consensus 76 ~~~~~~g~~~~~~~~~~~~~G~g~~~----~~---~~--~~~~~G~~~-------------------------~~~~-~~ 120 (263)
T 2yj3_A 76 KYAKEQGVKILEVKDFKEISGIGVRG----KI---SD--KIIEVKKAE-------------------------NNND-IA 120 (263)
Confidence 77643211000000011010000000 00 00 011112111 2333 44
Q ss_pred EEeecCCCCCCCCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccc
Q 044543 473 VAEQSVPEKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLG 552 (962)
Q Consensus 473 ~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~ 552 (962)
++++. .+.|.+.+.|+++|++.++|+.|++.|+++.|+|||+..++..+++++|+.
T Consensus 121 ~~~~~-------------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~----------- 176 (263)
T 2yj3_A 121 VYING-------------EPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQ----------- 176 (263)
Confidence 44443 789999999999999999999999999999999999999999999999974
Q ss_pred cchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhccccc
Q 044543 553 QIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIV 632 (962)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDiv 632 (962)
.+|+.+.|++|..+++.++..++.|+|+|||.||++|+++|++||++|.+++.+++.||++
T Consensus 177 -------------------~~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g~~~~~~~~~ad~v 237 (263)
T 2yj3_A 177 -------------------EYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMGNGVDISKNVADII 237 (263)
Confidence 2477778999999999999998999999999999999999999999998899999999999
Q ss_pred ccCCCchHHHHHHHHHHHHHHHHHHH
Q 044543 633 LTEPGLSVIVSAVLTSRAIFQRMKNY 658 (962)
Q Consensus 633 l~~~~~~~i~~~i~~gR~~~~~i~~~ 658 (962)
+.++++..++.++..||+++++|++|
T Consensus 238 ~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 238 LVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 99999999999999999999999875
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-27 Score=260.97 Aligned_cols=279 Identities=28% Similarity=0.402 Sum_probs=209.3
Q ss_pred HHHHHhcCCcccccCchHHhhcCceEEEecccccccCCceEEEEEeeeecccCCChHHHHHHHHHhccccCCChHHHHHH
Q 044543 313 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVENQDAIDACIV 392 (962)
Q Consensus 313 ~~~~l~~~~ilvk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~ 392 (962)
|+++++++|+++|+++++|+++++++||||||||||.+.+.+.++.. . .+ +.++++.+++..+.. ..||++.++.
T Consensus 9 ~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~--~-~~-~~~~~l~~~~~~e~~-s~hp~~~a~~ 83 (287)
T 3a1c_A 9 GSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVP--L-NG-DERELLRLAAIAERR-SEHPIAEAIV 83 (287)
T ss_dssp -----CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEE--S-SS-CHHHHHHHHHHHTTT-CCSHHHHHHH
T ss_pred hHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEe--C-CC-CHHHHHHHHHHHhhc-CCCHHHHHHH
Confidence 67899999999999999999999999999999999999999987653 2 23 778888887776654 4599999998
Q ss_pred HhhcChhhhhcCceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhccchHHHHHHHHHHHHHHhcCCeEEE
Q 044543 393 GMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLA 472 (962)
Q Consensus 393 ~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~ 472 (962)
.++..........+.+..++- + .+ .. ..+.+|.++.+.+.... .++.+.+..+.+..+|.++++
T Consensus 84 ~~~~~~g~~~~~~~~~~~~~G-----~-~~--~~-----~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~i~ 147 (287)
T 3a1c_A 84 KKALEHGIELGEPEKVEVIAG-----E-GV--VA-----DGILVGNKRLMEDFGVA---VSNEVELALEKLEREAKTAVI 147 (287)
T ss_dssp HHHHHTTCCCCCCSCEEEETT-----T-EE--EE-----TTEEEECHHHHHHTTCC---CCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHhcCCCccccccceeecC-----C-Ce--EE-----EEEEECCHHHHHhcCCC---ccHHHHHHHHHHHhCCCeEEE
Confidence 876422110001111111110 0 00 00 12456776654332211 112344556778889999999
Q ss_pred EEeecCCCCCCCCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccc
Q 044543 473 VAEQSVPEKTKESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLG 552 (962)
Q Consensus 473 ~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~ 552 (962)
+++.. .++|.+...++++|++.++++.|+++|+++.++||++...+..+.+.+|+.
T Consensus 148 ~~~d~-------------~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~----------- 203 (287)
T 3a1c_A 148 VARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----------- 203 (287)
T ss_dssp EEETT-------------EEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------
T ss_pred EEECC-------------EEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCc-----------
Confidence 99865 889999999999999999999999999999999999999999999999974
Q ss_pred cchhccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhccccc
Q 044543 553 QIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIV 632 (962)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDiv 632 (962)
..|..+.|+.|...++.++.. ..|+|+||+.||++|+++|+++|+++++.+..+..||++
T Consensus 204 -------------------~~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~~~~~~~~ad~v 263 (287)
T 3a1c_A 204 -------------------LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIV 263 (287)
T ss_dssp -------------------EEECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEEECCCSCCSSCCSSEE
T ss_pred -------------------eeeeecChHHHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeEEeCCCCHHHHhhCCEE
Confidence 246677799999999999888 889999999999999999999999987766667789999
Q ss_pred ccCCCchHHHHHHHHHHHHHHHHH
Q 044543 633 LTEPGLSVIVSAVLTSRAIFQRMK 656 (962)
Q Consensus 633 l~~~~~~~i~~~i~~gR~~~~~i~ 656 (962)
+.++++..+..++..+|+++++|+
T Consensus 264 ~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 264 LIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp ESSSCTHHHHHHHHTTC-------
T ss_pred EeCCCHHHHHHHHHHHHHHHHhhC
Confidence 988999999999999999999875
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.94 E-value=2.7e-27 Score=221.07 Aligned_cols=110 Identities=28% Similarity=0.479 Sum_probs=105.4
Q ss_pred HHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCeeecceEEEecCCeeEecccccCCCeeeecCCCCccccc
Q 044543 133 AAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTKMPGDEVFSG 212 (962)
Q Consensus 133 ~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~pv~K~~g~~v~~G 212 (962)
++++|+++.+++++|+|||+++++++++|+|||+|.|++||+|||||+|++|+ +.||||+|||||.|+.|.+|+.+|+|
T Consensus 2 al~~L~~l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~-~~vdeS~LTGEs~pv~k~~g~~v~aG 80 (113)
T 2hc8_A 2 AIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE-SYVDESMISGEPVPVLKSKGDEVFGA 80 (113)
T ss_dssp HHHHHHHHSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC-EEEECHHHHCCSSCEEECTTCEECTT
T ss_pred HHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEce-EEEEccccCCCCccEEECCCCEEEeC
Confidence 56788888899999999999999999999999999999999999999999995 89999999999999999999999999
Q ss_pred ceeecceEEEEEEEecchhHHHhHHHhhhcc
Q 044543 213 STCKQGEIEAVVIATGVHTFFGKAAHLVDST 243 (962)
Q Consensus 213 s~v~~G~~~~~V~~tG~~T~~gki~~l~~~~ 243 (962)
|.+.+|.+.++|++||.+|.+|+++++++++
T Consensus 81 t~~~~G~~~~~V~~~g~~T~~~~i~~lv~~a 111 (113)
T 2hc8_A 81 TINNTGVLKIRATRVGGETLLAQIVKLVEDA 111 (113)
T ss_dssp CEECSSCEEEEEEECGGGSHHHHHHHHHHHH
T ss_pred CEEeeceEEEEEEEecCcCHHHHHHHHHHHh
Confidence 9999999999999999999999999998754
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-26 Score=220.07 Aligned_cols=116 Identities=26% Similarity=0.466 Sum_probs=107.0
Q ss_pred HHhhhhHHHHhhcCCCCeEEEEECCe------EEEEECcCcCCCcEEEEeCCCeeecceEEEecCCeeEecccccCCCee
Q 044543 127 ENNAGNAAAALMAGLAPQTKVLRDGA------WREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTGESLP 200 (962)
Q Consensus 127 e~~~~~~~~~l~~~~~~~~~V~Rdg~------~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g~~~~Vdes~LTGEs~p 200 (962)
++|+.+++++|+++.+++++|+|+|+ +++|++++|+|||+|.|++||+|||||+|++|+ ..||||+|||||.|
T Consensus 2 ~~ka~~~l~~L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~-~~vdeS~LTGEs~p 80 (124)
T 2kij_A 2 SFTMSEALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGH-SMVDESLITGEAMP 80 (124)
T ss_dssp ----CCHHHHHHHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCC-CEEECTTTTCCSSC
T ss_pred hHHHHHHHHHHhccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEcc-EEEEeccccCCCcc
Confidence 57889999999999999999999764 789999999999999999999999999999996 58999999999999
Q ss_pred eecCCCCcccccceeecceEEEEEEEecchhHHHhHHHhhhcc
Q 044543 201 VTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST 243 (962)
Q Consensus 201 v~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~ 243 (962)
+.|.+|+.+|+||.+.+|.+.++|++||.+|.+|+|+++++++
T Consensus 81 v~k~~g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a 123 (124)
T 2kij_A 81 VAKKPGSTVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEA 123 (124)
T ss_dssp EECCTTEEECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTT
T ss_pred EEeCCCCEEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999998764
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.7e-25 Score=241.45 Aligned_cols=276 Identities=28% Similarity=0.407 Sum_probs=204.7
Q ss_pred cccCchHHhhcCceEEEecccccccCCceEEEEEeeeecccCCChHHHHHHHHHhccccCCChHHHHHHHhhcChhhhhc
Q 044543 324 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVENQDAIDACIVGMLGDAKEARA 403 (962)
Q Consensus 324 vk~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~ 403 (962)
+|+++++|.|++++.|||||+||||.|+|+|.++.. +. + +.+.++.+++...... .++...++...+........
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~--~~-~-~~~~~~~~~~~~~~~s-~~~~~~a~~~~~~~~g~~~~ 75 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVG--FN-H-SEDELLQIAASLEARS-EHPIAAAIVEEAEKRGFGLT 75 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEE--SS-S-CHHHHHHHHHHHHTTC-CSHHHHHHHHHHHHTTCCCC
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEe--cC-C-CHHHHHHHHHHhhccC-CCHHHHHHHHHHHhcCCCCC
Confidence 588999999999999999999999999999998653 32 3 7777887777665544 47888887776643211111
Q ss_pred CceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhccchHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCC
Q 044543 404 GITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTK 483 (962)
Q Consensus 404 ~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~ 483 (962)
..+.+..++..+ ....+ ++ ..+..|.++.+.+...... ...+++..++.+.+.+++..
T Consensus 76 ~~~~~~~~~g~~----~~~~~---~~--~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~------ 133 (280)
T 3skx_A 76 EVEEFRAIPGKG----VEGIV---NG--RRYMVVSPGYIRELGIKTD-------ESVEKLKQQGKTVVFILKNG------ 133 (280)
T ss_dssp CCEEEEEETTTE----EEEEE---TT--EEEEEECHHHHHHTTCCCC-------TTHHHHHTTTCEEEEEEETT------
T ss_pred CccceeecCCCE----EEEEE---CC--EEEEEecHHHHHHcCCCch-------HHHHHHHhCCCeEEEEEECC------
Confidence 122222222111 11111 23 2345577777655433211 23456677899998888755
Q ss_pred CCCCCCceEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcch
Q 044543 484 ESPGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALP 563 (962)
Q Consensus 484 ~~~e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~ 563 (962)
.++|.+.+.|+++|++.++++.|++.|+++.++||+....+..+.+.+|+.
T Consensus 134 -------~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~---------------------- 184 (280)
T 3skx_A 134 -------EVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLD---------------------- 184 (280)
T ss_dssp -------EEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS----------------------
T ss_pred -------EEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCh----------------------
Confidence 889999999999999999999999999999999999999999999999974
Q ss_pred HHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHH
Q 044543 564 VDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVS 643 (962)
Q Consensus 564 ~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~ 643 (962)
..|..+.|.+|...++.+.+.. .|+|+||+.||++|++.|++|++|+++++.+++.||+++..+++..+..
T Consensus 185 --------~~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~~~~~Ag~~va~~~~~~~~~~~a~~~~~~~~~~~l~~ 255 (280)
T 3skx_A 185 --------DYFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAPALAQADVGIAIGAGTDVAVETADIVLVRNDPRDVAA 255 (280)
T ss_dssp --------EEECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTHHHHHHSSEEEECSCCSSSCCCSSSEECSSCCTHHHHH
T ss_pred --------hHhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhHHHHHhCCceEEecCCcHHHHhhCCEEEeCCCHHHHHH
Confidence 2477888999999999998876 4689999999999999999999999988889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 044543 644 AVLTSRAIFQRMKNYTIYAVS 664 (962)
Q Consensus 644 ~i~~gR~~~~~i~~~i~~~~~ 664 (962)
++..+|++++++++++.|++.
T Consensus 256 ~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 256 IVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp HHHHHHTCCC-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999998875
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.86 E-value=3.3e-23 Score=228.58 Aligned_cols=145 Identities=13% Similarity=0.032 Sum_probs=115.5
Q ss_pred cCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHH--hhhcceEE
Q 044543 498 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDEL--IEKADGFA 575 (962)
Q Consensus 498 i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~v~a 575 (962)
..+++||+++++++.|+++|++|+|+|||...++.++++++|+...... +. ..... .++..+... -...++++
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~--i~-~n~l~--~~~~~~~~~~~~~~i~~~~ 212 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVK--VV-SNFMD--FDENGVLKGFKGELIHVFN 212 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEE--EE-EECEE--ECTTSBEEEECSSCCCTTC
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccce--EE-eeeEE--EcccceeEeccccccchhh
Confidence 3579999999999999999999999999999999999999998643210 11 00000 000000000 01134688
Q ss_pred ecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhh---cCCeeEEcc-------CchHHHHhcccccccCCCchHHHHHH
Q 044543 576 GVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALK---KADIGIAVA-------DATDAARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 576 rvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk---~AdVGIamg-------~gt~~a~~aaDivl~~~~~~~i~~~i 645 (962)
+..|.+|...+..+++.++.|+|+|||+||+||++ .|||||+|| ++++.+++++||||++|++..++.+|
T Consensus 213 k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~i 292 (297)
T 4fe3_A 213 KHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSI 292 (297)
T ss_dssp HHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHH
T ss_pred cccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHH
Confidence 88999999999999999999999999999999955 999999999 79999999999999999999999988
Q ss_pred HH
Q 044543 646 LT 647 (962)
Q Consensus 646 ~~ 647 (962)
..
T Consensus 293 l~ 294 (297)
T 4fe3_A 293 LQ 294 (297)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.3e-18 Score=173.10 Aligned_cols=139 Identities=16% Similarity=0.323 Sum_probs=117.3
Q ss_pred cCCChHHHHHHHHHhc--cccCCChHHHHHHHhhcCh--hhhhcCceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcH
Q 044543 364 KDMDKDTVILYGARAS--RVENQDAIDACIVGMLGDA--KEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAP 439 (962)
Q Consensus 364 ~~~~~~~~l~~a~~~~--~~~~~~~~~~al~~~~~~~--~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~ 439 (962)
.+.+.+.++.+|+.++ .....||+|.|++.++... ...+..|+.++.+||+|.+|||++++++++|+..+++||||
T Consensus 11 ~G~~~~~vl~~a~L~s~~~~~~~n~~d~Ail~~~~~~~~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGAp 90 (170)
T 3gwi_A 11 SGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGAL 90 (170)
T ss_dssp TSCBCHHHHHHHHHHHHHCCSCCCHHHHHHHHTSCHHHHHHHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECH
T ss_pred CCCCHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhcChhhhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCc
Confidence 4678889999999988 4445799999999887532 23467799999999999999999999887888899999999
Q ss_pred HHHHHHhcc----------chHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCC---CCCCCCCceEEEEeecCCCC
Q 044543 440 EQIIELCNL----------REDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKT---KESPGGPWQFVGLLPLFDPP 502 (962)
Q Consensus 440 e~il~~~~~----------~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~---~~~~e~~l~llG~i~i~D~l 502 (962)
|.|+++|+. +++.++.+.+.+++|+++|+|||++||+.++..+ ....|++|+|+|+++|-|.-
T Consensus 91 E~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~~~~~E~~L~f~G~~g~~~~~ 166 (170)
T 3gwi_A 91 QEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDHH 166 (170)
T ss_dssp HHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCCCGGGSCSEEEEEEEEEEC--
T ss_pred HHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccccCccccCCcEEEehhcccccc
Confidence 999999973 4567788999999999999999999999987543 23469999999999998853
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.36 E-value=3.8e-13 Score=137.86 Aligned_cols=126 Identities=21% Similarity=0.358 Sum_probs=106.5
Q ss_pred HHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHH
Q 044543 509 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRK 588 (962)
Q Consensus 509 ~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~ 588 (962)
+|+.|+++|+++.++||+....+..+++++|+.. .|..+ .+|.+.++.
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~------------------------------~f~~~--~~K~~~~~~ 101 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH------------------------------LFQGR--EDKLVVLDK 101 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE------------------------------EECSC--SCHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH------------------------------HhcCc--CChHHHHHH
Confidence 9999999999999999999999999999999842 12222 567777776
Q ss_pred HhhC----CCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCC----chHHHHHHHHHHHHHHHHHHHHH
Q 044543 589 LQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPG----LSVIVSAVLTSRAIFQRMKNYTI 660 (962)
Q Consensus 589 lq~~----g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~----~~~i~~~i~~gR~~~~~i~~~i~ 660 (962)
+.++ ...|+|+||+.||++|+++|++|++++++.+.+++.||+++.+++ +..+.+.+..+|..++++++++.
T Consensus 102 ~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~~~~ 181 (189)
T 3mn1_A 102 LLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHSVYL 181 (189)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHTTS
T ss_pred HHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHHHHh
Confidence 6654 467999999999999999999999999999999999999998764 67788888889999999999999
Q ss_pred HHHHHH
Q 044543 661 YAVSIT 666 (962)
Q Consensus 661 ~~~~~n 666 (962)
|.+.+|
T Consensus 182 ~~~~~~ 187 (189)
T 3mn1_A 182 EGHHHH 187 (189)
T ss_dssp TTC---
T ss_pred cccccc
Confidence 887766
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.22 E-value=8.1e-12 Score=139.65 Aligned_cols=156 Identities=13% Similarity=0.116 Sum_probs=109.9
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
+++|++.+.++.|+++|+++.|+||+....+..+.+++|+..-......+...... +. +.....+++-.|+
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~t----g~-----~~~~~~~~kpk~~ 248 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLT----GQ-----VLGEVVSAQTKAD 248 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEE----EE-----EESCCCCHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeee----ee-----ecccccChhhhHH
Confidence 68999999999999999999999999999999999999984210000000000000 00 0000011122344
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHHHHHHHHHHHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTI 660 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~~~~i~~~i~ 660 (962)
....+.+.++-....|+|+|||.||++|+++|++|++| ++.+..++.||+++..+++..++.++.......+|++.|+.
T Consensus 249 ~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~-~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r~~~~~~ 327 (335)
T 3n28_A 249 ILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQKLSWKSK 327 (335)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTCCCCC--
T ss_pred HHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhhhccccc
Confidence 44445555544456799999999999999999999999 88899999999999999999999999988888888999998
Q ss_pred HHHHHH
Q 044543 661 YAVSIT 666 (962)
Q Consensus 661 ~~~~~n 666 (962)
+.+.+|
T Consensus 328 ~~~~~~ 333 (335)
T 3n28_A 328 EGHHHH 333 (335)
T ss_dssp ------
T ss_pred cccccc
Confidence 887766
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=1.2e-10 Score=118.01 Aligned_cols=131 Identities=21% Similarity=0.226 Sum_probs=103.7
Q ss_pred CccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhH
Q 044543 503 RHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHK 582 (962)
Q Consensus 503 r~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK 582 (962)
.++..++|++|++.|+++.++||++...+..+.+++|+.. .|... ..|
T Consensus 37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~------------------------------~~~~~--k~k 84 (180)
T 1k1e_A 37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL------------------------------FFLGK--LEK 84 (180)
T ss_dssp EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE------------------------------EEESC--SCH
T ss_pred ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce------------------------------eecCC--CCc
Confidence 4567799999999999999999999999999999999852 12211 346
Q ss_pred HHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHH----HHHHHHHHHHHH
Q 044543 583 YEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIV----SAVLTSRAIFQR 654 (962)
Q Consensus 583 ~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~----~~i~~gR~~~~~ 654 (962)
...++.+.++ | ..|+|+||+.||++|++.|+++++++++.+.+++.||+++.+++...++ +.+...|..+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~~~ 164 (180)
T 1k1e_A 85 ETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSV 164 (180)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHH
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeCCccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCchhh
Confidence 6666655432 3 5799999999999999999999999988899999999999887655555 444556667888
Q ss_pred HHHHHHHHHHH
Q 044543 655 MKNYTIYAVSI 665 (962)
Q Consensus 655 i~~~i~~~~~~ 665 (962)
++..+-|+.+.
T Consensus 165 ~~~~~~~~~~~ 175 (180)
T 1k1e_A 165 FDTAQGFLKSV 175 (180)
T ss_dssp HHCHHHHHHHG
T ss_pred hhhccchhhhh
Confidence 88777776654
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.10 E-value=1.1e-10 Score=119.58 Aligned_cols=124 Identities=17% Similarity=0.247 Sum_probs=100.5
Q ss_pred HHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEec--CHhhHHHHH
Q 044543 509 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGV--FPEHKYEIV 586 (962)
Q Consensus 509 ~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arv--sP~qK~~iV 586 (962)
+|+.|+++|+++.++||+....+..+.+++|+.. .|..+ .|+-...+.
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~------------------------------~~~~~kpk~~~~~~~~ 103 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH------------------------------YYKGQVDKRSAYQHLK 103 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE------------------------------EECSCSSCHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc------------------------------ceeCCCChHHHHHHHH
Confidence 4999999999999999999999999999999853 12222 355555666
Q ss_pred HHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCC----chHHHHHHHHHHHHHHHHHHHHHHH
Q 044543 587 RKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPG----LSVIVSAVLTSRAIFQRMKNYTIYA 662 (962)
Q Consensus 587 ~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~----~~~i~~~i~~gR~~~~~i~~~i~~~ 662 (962)
+.++-....|+|+||+.||++|++.|+++++++++.+.++..||+++.+++ +..+.+.+...|..|+++.++..|+
T Consensus 104 ~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~~~~~~ 183 (191)
T 3n1u_A 104 KTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITGYLKQ 183 (191)
T ss_dssp HHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHHHHTC
T ss_pred HHhCCCHHHEEEECCCHHHHHHHHHCCCEEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHhc
Confidence 666555567999999999999999999999999999999999999998877 4456666677777888777766553
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.06 E-value=6.4e-11 Score=121.84 Aligned_cols=101 Identities=21% Similarity=0.345 Sum_probs=83.6
Q ss_pred HHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHH
Q 044543 508 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVR 587 (962)
Q Consensus 508 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~ 587 (962)
.+|+.|+++|+++.++||++...+..+++++|+.. +|... ..|...++
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~------------------------------~~~~~--k~k~~~~~ 106 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL------------------------------IYQGQ--DDKVQAYY 106 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE------------------------------EECSC--SSHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE------------------------------EeeCC--CCcHHHHH
Confidence 45999999999999999999999999999999852 12222 45666665
Q ss_pred HHhhC----CCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchH
Q 044543 588 KLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSV 640 (962)
Q Consensus 588 ~lq~~----g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~ 640 (962)
.+.++ ...|+|+||+.||.+|+++|+++++|+++.+.+++.||+++.+++-.+
T Consensus 107 ~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~na~~~~~~~ad~v~~~~~~~G 163 (195)
T 3n07_A 107 DICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRANYVTHIKGGHG 163 (195)
T ss_dssp HHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCHHHHHHCSEECSSCTTTT
T ss_pred HHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEECChHHHHHHhCCEEEcCCCCCC
Confidence 55442 356999999999999999999999999999999999999998876444
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.04 E-value=3.7e-10 Score=118.96 Aligned_cols=148 Identities=23% Similarity=0.164 Sum_probs=105.9
Q ss_pred CCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCC--Ccc-cc--cccch-h-cc-------------
Q 044543 499 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--PSS-AL--LGQIK-D-AN------------- 558 (962)
Q Consensus 499 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~--~~~-~l--~~~~~-~-~~------------- 558 (962)
..++.+++.++|++|++.|++++++||+....+..+++++|+..... +.. +. .+... . ..
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~ 99 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 99 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHH
Confidence 34578899999999999999999999999999999999999853110 000 00 11111 0 00
Q ss_pred ----------------------CCcchHHHHhhh--cce-----EEecCH--hhHHHHHHHHhhC-C---CEEEEEcCCc
Q 044543 559 ----------------------ISALPVDELIEK--ADG-----FAGVFP--EHKYEIVRKLQER-K---HICGMTGDGV 603 (962)
Q Consensus 559 ----------------------~~~~~~~~~~~~--~~v-----~arvsP--~qK~~iV~~lq~~-g---~~v~miGDG~ 603 (962)
.+.+.++++.+. ..+ +-.+.| .+|...++.+.+. | ..|+++||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~ 179 (227)
T 1l6r_A 100 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 179 (227)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred hcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcH
Confidence 001112222211 111 223445 6899988888764 2 4689999999
Q ss_pred CChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 604 NDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 604 ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
||.+|++.|++|++|+++.+..++.||+++.+++-.++.++++
T Consensus 180 nD~~m~~~ag~~va~~n~~~~~k~~a~~v~~~~~~~Gv~~~l~ 222 (227)
T 1l6r_A 180 NDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFK 222 (227)
T ss_dssp GGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred HhHHHHHHcCceEEecCchHHHHHhCCEEecCCCCcHHHHHHH
Confidence 9999999999999999999999999999999888888888875
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.02 E-value=3.1e-10 Score=118.13 Aligned_cols=99 Identities=22% Similarity=0.313 Sum_probs=84.9
Q ss_pred HHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHH
Q 044543 509 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRK 588 (962)
Q Consensus 509 ~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~ 588 (962)
+++.|+++|+++.++||+....+..+++++|+.. +|..+ ..|...++.
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~------------------------------~f~~~--k~K~~~l~~ 131 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH------------------------------LYQGQ--SDKLVAYHE 131 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE------------------------------EECSC--SSHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch------------------------------hhccc--CChHHHHHH
Confidence 9999999999999999999999999999999842 23333 567777776
Q ss_pred HhhC----CCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCch
Q 044543 589 LQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLS 639 (962)
Q Consensus 589 lq~~----g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~ 639 (962)
+.++ ...|+|+||+.||++|+++|+++++++++.+.+++.||+++.+++-.
T Consensus 132 ~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~~~~~~~Ad~v~~~~~~~ 186 (211)
T 3ij5_A 132 LLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAHYVTRIKGGR 186 (211)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTT
T ss_pred HHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeCCccHHHHhhCCEEEeCCCCC
Confidence 6654 56799999999999999999999999988888999999999887533
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.02 E-value=3.4e-10 Score=113.46 Aligned_cols=110 Identities=20% Similarity=0.172 Sum_probs=88.0
Q ss_pred eEEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHH--HhCCCCCCCCcccccccchhccCCcchHHHHh
Q 044543 491 QFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGR--RLGMGTNMYPSSALLGQIKDANISALPVDELI 568 (962)
Q Consensus 491 ~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~--~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 568 (962)
+.++.+.++|. .+|+.|++.|+++.|+||+ ..+..+++ .+|+.
T Consensus 32 ~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~--------------------------- 76 (168)
T 3ewi_A 32 KEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK--------------------------- 76 (168)
T ss_dssp CCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC---------------------------
T ss_pred CEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE---------------------------
Confidence 56777777776 3899999999999999999 67778888 45542
Q ss_pred hhcceEEecCHhhHHHHHHHHhhC----CCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHH
Q 044543 569 EKADGFAGVFPEHKYEIVRKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVI 641 (962)
Q Consensus 569 ~~~~v~arvsP~qK~~iV~~lq~~----g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i 641 (962)
+|. .+++|...++.+.++ ...|+|+||+.||.+|++.|+++++|+++.+.+++.||+++.+++-...
T Consensus 77 ----~~~--g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~na~~~~k~~Ad~v~~~~~~~G~ 147 (168)
T 3ewi_A 77 ----TEV--SVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVGYICKCSGGRGA 147 (168)
T ss_dssp ----EEC--SCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECTTCCHHHHTTCSEECSSCTTTTH
T ss_pred ----EEE--CCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeCChhHHHHHhCCEEeCCCCCccH
Confidence 111 134687777776653 3569999999999999999999999999999999999999987765553
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.01 E-value=6.7e-10 Score=112.15 Aligned_cols=104 Identities=24% Similarity=0.344 Sum_probs=87.6
Q ss_pred HHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHH
Q 044543 509 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRK 588 (962)
Q Consensus 509 ~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~ 588 (962)
+++.|+++|+++.++||+....+..+++.+|+. +|+.. ..|...++.
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-------------------------------~~~~~--~~k~~~l~~ 93 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-------------------------------VLHGI--DRKDLALKQ 93 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-------------------------------EEESC--SCHHHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-------------------------------eEeCC--CChHHHHHH
Confidence 999999999999999999999999999999984 12222 557777766
Q ss_pred HhhC----CCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHH
Q 044543 589 LQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 589 lq~~----g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i 645 (962)
+.++ ...|+|+||+.||++|++.|++|++++++.+.+++.||+++.+++..+++..+
T Consensus 94 ~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~~~~~~~~~ad~v~~~~~~~g~~~~l 154 (176)
T 3mmz_A 94 WCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTVPGGDGAIREI 154 (176)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHH
T ss_pred HHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECCChhHHHHHhCCEEecCCCCCcHHHHH
Confidence 6553 35699999999999999999999999989999999999999988866665544
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=2.1e-09 Score=105.68 Aligned_cols=140 Identities=19% Similarity=0.256 Sum_probs=96.0
Q ss_pred ccccccCCceEEEEEeeeecccCCChHHHHHHHHHhccccCCChHHHHHHHhhcCh-hhhhcCce--EeeecCCCCCCce
Q 044543 343 KTGTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVENQDAIDACIVGMLGDA-KEARAGIT--ELHFLPFNPVEKR 419 (962)
Q Consensus 343 KTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~-~~~~~~~~--~l~~~pF~s~~kr 419 (962)
..||+|.|.+.+..+.. ..+.++++++.+++.++.. ++||++.|++.++.+. .......+ ..++.||++..++
T Consensus 13 ~~~tit~gnr~vt~v~~---~~g~~e~elL~lAAs~E~~-SeHPla~AIv~~A~~~~~l~~~~~~~~~~~~~~F~a~~G~ 88 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIP---AQGVDEKTLADAAQLASLA-DETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRM 88 (156)
T ss_dssp --------CEEEEEEEE---CTTSCHHHHHHHHHHTTSS-CCSHHHHHHHHHHHHHTTCCCCCHHHHTCEEEEEETTTTE
T ss_pred CCCceecCCCeEEEEEe---cCCCCHHHHHHHHHHHhCc-CCCHHHHHHHHHHHHhcCCCcccccccccceeeccccCCC
Confidence 47999999999998653 3467899999999988855 4599999999987532 11111110 1235789988886
Q ss_pred EEEEEEcCCCCEEEEEeCcHHHHHHHhccc-hHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeec
Q 044543 420 TAITYIDSDGSWHRISKGAPEQIIELCNLR-EDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPL 498 (962)
Q Consensus 420 ~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i 498 (962)
..+.+ +| ..+.+|+++.|.+++... .+....+.+.+++++.+|.++++||... +++|++++
T Consensus 89 ~Gv~v---~G--~~v~vGn~~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA~d~-------------~l~GvIal 150 (156)
T 1svj_A 89 SGINI---DN--RMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIAL 150 (156)
T ss_dssp EEEEE---TT--EEEEEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEE
T ss_pred CeEEE---CC--EEEEEeCcHHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEEECC-------------EEEEEEEE
Confidence 77643 66 578999988776666421 1223346777889999999999999754 89999999
Q ss_pred CCCCCc
Q 044543 499 FDPPRH 504 (962)
Q Consensus 499 ~D~lr~ 504 (962)
.|++|+
T Consensus 151 aD~iK~ 156 (156)
T 1svj_A 151 KDIVKG 156 (156)
T ss_dssp EECCCC
T ss_pred ecCCCC
Confidence 999996
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=2.2e-09 Score=106.56 Aligned_cols=100 Identities=29% Similarity=0.329 Sum_probs=81.9
Q ss_pred HHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHH
Q 044543 509 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRK 588 (962)
Q Consensus 509 ~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~ 588 (962)
+++.|++.|+++.++||+....+..+.+++|+... |... ..|...++.
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~------------------------------~~~~--kpk~~~~~~ 86 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYL------------------------------FQGV--VDKLSAAEE 86 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEE------------------------------ECSC--SCHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEe------------------------------eccc--CChHHHHHH
Confidence 89999999999999999999999999999998521 2212 334444444
Q ss_pred Hhh----CCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchH
Q 044543 589 LQE----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSV 640 (962)
Q Consensus 589 lq~----~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~ 640 (962)
+.+ ....|+|+||+.||.+|+++|+++++++++.+.+++.||+++.+++...
T Consensus 87 ~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g 142 (164)
T 3e8m_A 87 LCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEKRGGEG 142 (164)
T ss_dssp HHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECCTTSCHHHHTTCSSCCCCCTTTT
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcCChHHHHHHhCcEEeccCCCCc
Confidence 333 3457999999999999999999999999999999999999999988554
|
| >2o98_P H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, electrochemical proton G cell turgor, regulation, protein binding; HET: FSC; 2.70A {Nicotiana plumbaginifolia} | Back alignment and structure |
|---|
Probab=98.87 E-value=6.9e-10 Score=87.24 Aligned_cols=51 Identities=78% Similarity=1.123 Sum_probs=49.1
Q ss_pred chhhhhHHHHHHHHHhHHHHHhhhhcccccchhhHHhcCCChhhhhhcccC
Q 044543 912 NYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 962 (962)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 962 (962)
+|.+++++++++++|+|++||+|+|++++|++|+++++|.|+++++++|||
T Consensus 2 s~~~~s~~ae~a~~raeiarL~~~~sl~~~~es~~kl~g~dl~~~~~~~tv 52 (52)
T 2o98_P 2 NFNELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYDI 52 (52)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHTCCCCCCCCCCCC
T ss_pred chhHHHHHHHHhcCcceeeccccchhHHHHHHhhHhhhhhhHhhcccccCC
Confidence 578899999999999999999999999999999999999999999999997
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.82 E-value=4.7e-10 Score=125.20 Aligned_cols=152 Identities=15% Similarity=0.163 Sum_probs=102.6
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccch--------------hccCC---cch
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIK--------------DANIS---ALP 563 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~--------------~~~~~---~~~ 563 (962)
++++++.+.++.|++ |+.+.++|||....+..+.+.+++.... ....+..... +.... .++
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 180 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGEL-HGTEVDFDSIAVPEGLREELLSIIDVIASLSGEEL 180 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEE-EEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhh-cccccchhhhccccccceeEEecCHHHHhhhhHHH
Confidence 468999999999999 9999999999977777777877773211 0000000000 00000 011
Q ss_pred HHHHhhh----c--ceEE----ecCHhhHHHHHHHHhhCC--CEEEEEcCCcCChhhhhcC----CeeEEccCchHHHHh
Q 044543 564 VDELIEK----A--DGFA----GVFPEHKYEIVRKLQERK--HICGMTGDGVNDAPALKKA----DIGIAVADATDAARG 627 (962)
Q Consensus 564 ~~~~~~~----~--~v~a----rvsP~qK~~iV~~lq~~g--~~v~miGDG~ND~~aLk~A----dVGIamg~gt~~a~~ 627 (962)
+ +.+.+ . ..+. -..+.+|...++.++... +.|+++|||.||++|++.| ++|||| ++.+.+++
T Consensus 181 l-~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~~~lk~ 258 (332)
T 1y8a_A 181 F-RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGNEYALK 258 (332)
T ss_dssp H-HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCHHHHT
T ss_pred H-HHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCHHHHh
Confidence 1 11100 0 0011 113567998888776543 6699999999999999999 999999 99999999
Q ss_pred cccccccCCCchHHHHHH----HHHHHHHHHHHH
Q 044543 628 ASDIVLTEPGLSVIVSAV----LTSRAIFQRMKN 657 (962)
Q Consensus 628 aaDivl~~~~~~~i~~~i----~~gR~~~~~i~~ 657 (962)
.||+++.+++...+..++ ..||..+ ++-+
T Consensus 259 ~Ad~v~~~~~~dGV~~~l~~~~~~~~~~~-~~~~ 291 (332)
T 1y8a_A 259 HADVVIISPTAMSEAKVIELFMERKERAF-EVLS 291 (332)
T ss_dssp TCSEEEECSSTHHHHHHHHHHHHHGGGGG-GGGG
T ss_pred hCcEEecCCCCCHHHHHHHHHHHcCCchh-HHHH
Confidence 999999998887776655 5577666 4444
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.77 E-value=9.4e-09 Score=118.26 Aligned_cols=136 Identities=21% Similarity=0.231 Sum_probs=106.0
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEe----
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAG---- 576 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar---- 576 (962)
++.||+.+.++.|++.|+++.++||.....+..+.+++|+.........+.+ ..+.++
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d------------------g~~tg~~~~~ 317 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVD------------------GTLTGRVVGP 317 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEET------------------TEEEEEECSS
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeC------------------CEEEeeEccC
Confidence 6899999999999999999999999999999999999998521100000000 001111
Q ss_pred -cCHhhHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHHHHHHH
Q 044543 577 -VFPEHKYEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAI 651 (962)
Q Consensus 577 -vsP~qK~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~gR~~ 651 (962)
..+..|.++++.+.++ | ..|+|+|||.||.+|+++|++|+++ ++.+..++.||+++..+++..++.++..+|.-
T Consensus 318 v~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~-~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~ 396 (415)
T 3p96_A 318 IIDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF-NAKPALREVADASLSHPYLDTVLFLLGVTRGE 396 (415)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHH
T ss_pred CCCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE-CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHH
Confidence 1266777777766553 3 4699999999999999999999999 67788888999999999999999999888876
Q ss_pred HHHH
Q 044543 652 FQRM 655 (962)
Q Consensus 652 ~~~i 655 (962)
+...
T Consensus 397 ~~~~ 400 (415)
T 3p96_A 397 IEAA 400 (415)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6544
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.75 E-value=2.3e-08 Score=108.12 Aligned_cols=71 Identities=24% Similarity=0.315 Sum_probs=60.1
Q ss_pred ecCHh--hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 576 GVFPE--HKYEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 576 rvsP~--qK~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
.+.|. .|...++.+.++ | ..|+++||+.||.+|++.|++|+|||++.+.++++||+|+.+++-.++..+|+
T Consensus 190 ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 4dw8_A 190 ELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAADYITLTNDEDGVAEAIE 266 (279)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHH
Confidence 34444 677777776653 2 35899999999999999999999999999999999999998888888988885
|
| >3m50_P N.plumbaginifolia H+-translocating ATPase mRNA; all helical, protein-protein complex, protein binding; HET: EBT; 2.60A {Nicotiana plumbaginifolia} PDB: 3m51_P* 4dx0_P* | Back alignment and structure |
|---|
Probab=98.74 E-value=1.3e-09 Score=73.22 Aligned_cols=30 Identities=87% Similarity=1.236 Sum_probs=29.2
Q ss_pred hhhhcccccchhhHHhcCCChhhhhhcccC
Q 044543 933 RELHTLKGHVESVVKLKGLDIETIQQHYTV 962 (962)
Q Consensus 933 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 962 (962)
||+||++||+||++++||+|+|+|||||||
T Consensus 2 rElhTLkghvESv~KLKglDi~~i~~~yTV 31 (31)
T 3m50_P 2 RELHTLKGHVEAVVKLKGLDIETIQQSYDI 31 (31)
T ss_dssp HHHHCHHHHHHHHHHHTTCCSCCCCCCCCC
T ss_pred chhhHHHHHHHHHHHHhcCChhhhhhcccC
Confidence 689999999999999999999999999997
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.72 E-value=1.3e-08 Score=105.04 Aligned_cols=133 Identities=22% Similarity=0.236 Sum_probs=95.4
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEe-cC
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAG-VF 578 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar-vs 578 (962)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...+.... . ... ..+... ..
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f--~~~~~~~~-~-~~~----------~~~~~~~~~ 139 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAF--SNTLIVEN-D-ALN----------GLVTGHMMF 139 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEE--EEEEEEET-T-EEE----------EEEEESCCS
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhc--cceeEEeC-C-EEE----------eeeccCCCC
Confidence 358899999999999999999999999999999999999985311 00100000 0 000 000000 12
Q ss_pred HhhHHHHHHHHhhC----CCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHHH
Q 044543 579 PEHKYEIVRKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLT 647 (962)
Q Consensus 579 P~qK~~iV~~lq~~----g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~ 647 (962)
+..|.+.++.+.++ ...|+|+||+.||.+|++.|+++++| ++.+..++.||+++.++++..+..++++
T Consensus 140 ~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~-~~~~~l~~~ad~v~~~~dl~~~~~~~~~ 211 (217)
T 3m1y_A 140 SHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHCINEPDLALIKPLIEG 211 (217)
T ss_dssp TTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE-SCCHHHHTTCSEEECSSBGGGGTTC---
T ss_pred CCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE-CccHHHHHhcceeecccCHHHHHHHhcc
Confidence 34566666555442 35689999999999999999999999 7778888999999999999999888764
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.65 E-value=4e-08 Score=106.12 Aligned_cols=66 Identities=23% Similarity=0.261 Sum_probs=47.3
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
.|...++.+.+. | ..|+++||+.||.+|++.|++|+||++|.+..|++||+|..+++-.++.++|+
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 3mpo_A 197 SKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDEVKEAAQAVTLTNAENGVAAAIR 266 (279)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCHHHHHCSCBC------CHHHHHC
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHHHHHhcceeccCCCccHHHHHHH
Confidence 488877776653 3 35999999999999999999999999999999999999998888888888774
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.63 E-value=1.3e-07 Score=102.80 Aligned_cols=67 Identities=15% Similarity=0.146 Sum_probs=58.4
Q ss_pred hhHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 580 EHKYEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 580 ~qK~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
..|...++.+.++ | ..|+++||+.||.+|++.|++|+||+++.+..++.||+++.+++-.++.++|+
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~s~~edGv~~~i~ 271 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADWVTRSNDEQGVAYMMK 271 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHHHHHhcCEECCCCCccHHHHHHH
Confidence 4587777777653 2 35899999999999999999999999999999999999998888888988886
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.63 E-value=2.6e-08 Score=110.29 Aligned_cols=132 Identities=17% Similarity=0.191 Sum_probs=94.6
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.||+.+.++.|++.|+++.++||.....+..+.+++|+...........+........ ..-..+.
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg~i~-------------~~~~~~k 245 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTDNIT-------------LPIMNAA 245 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEEEEEEC-------------SSCCCHH
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCeeeeeEe-------------cccCCCC
Confidence 388999999999999999999999999999999999999853110000000000000000 0011345
Q ss_pred hHHHHHHHHhh----CCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQE----RKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~----~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
.|.++++.+.+ ....|+|+||+.||.+|+++|++|+++ ++.+..++.||.++..+++..++.+++
T Consensus 246 pkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~-~~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 246 NKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred CCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 66666655543 235699999999999999999999999 566777889999998889988877653
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.60 E-value=1.1e-08 Score=103.76 Aligned_cols=117 Identities=21% Similarity=0.290 Sum_probs=89.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceE--EecC
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGF--AGVF 578 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~--arvs 578 (962)
++++++.+.++.|++.|+++.++|++....+..+ +.+|+..- . ..+.... .++ ....
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~--~~~~~~~-----------------~~~~~~~~~ 137 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-A--NRAIFED-----------------GKFQGIRLR 137 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-E--EEEEEET-----------------TEEEEEECC
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-e--eeEEeeC-----------------CceECCcCC
Confidence 7899999999999999999999999998888877 77876321 0 0000000 001 3456
Q ss_pred HhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 579 PEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 579 P~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
|..|...++.+ ....|+|+||+.||.+|++.|++|++|+++.+ .||+++ +++..+...++
T Consensus 138 ~~~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~~~~~~----~ad~v~--~~~~el~~~l~ 197 (201)
T 4ap9_A 138 FRDKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAVGREIP----GADLLV--KDLKELVDFIK 197 (201)
T ss_dssp SSCHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEESSCCT----TCSEEE--SSHHHHHHHHH
T ss_pred ccCHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEECCCCc----cccEEE--ccHHHHHHHHH
Confidence 78899999988 45668899999999999999999999987665 889998 55767666654
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.60 E-value=5.9e-08 Score=98.81 Aligned_cols=106 Identities=26% Similarity=0.332 Sum_probs=83.1
Q ss_pred HHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHHH
Q 044543 509 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRK 588 (962)
Q Consensus 509 ~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~ 588 (962)
+|+.|++.|+++.++||+....+..+.+++|+... |... ..|...++.
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~------------------------------~~~~--kpk~~~~~~ 108 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHL------------------------------YQGQ--SNKLIAFSD 108 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEE------------------------------ECSC--SCSHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCcee------------------------------ecCC--CCCHHHHHH
Confidence 89999999999999999999999999999998521 1111 234444444
Q ss_pred HhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHH-HHHH
Q 044543 589 LQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIV-SAVL 646 (962)
Q Consensus 589 lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~-~~i~ 646 (962)
+.++ | ..|+|+||+.||.+|++.|+++++++++.+.+++.||+++.+++-.+++ ++++
T Consensus 109 ~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 109 LLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp HHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEecCcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence 4332 3 5699999999999999999999999877777788999999887655555 4443
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=5.7e-08 Score=99.24 Aligned_cols=128 Identities=23% Similarity=0.344 Sum_probs=88.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEe-cCH
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAG-VFP 579 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar-vsP 579 (962)
++.+++.++++.|++.|+++.++||+....+..+.+.+|+... ......... ...++ .+... +.+
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~----------~~~~~~~~~ 141 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYA-FANRLIVKD---GKLTG----------DVEGEVLKE 141 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEE-EEEEEEEET---TEEEE----------EEECSSCST
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeE-EEeeeEEEC---CEEcC----------CcccCccCC
Confidence 4678999999999999999999999998888888888887421 000000000 00000 00000 224
Q ss_pred hhHHHHHHHHhh-CC---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHH
Q 044543 580 EHKYEIVRKLQE-RK---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVS 643 (962)
Q Consensus 580 ~qK~~iV~~lq~-~g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~ 643 (962)
..|...++.+.+ .| ..|+++||+.||.+|++.|+++++|+ +.+..+..||+++.++++..+..
T Consensus 142 ~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~-~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 142 NAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC-AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp THHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES-CCHHHHTTCSEEECSSCGGGGGG
T ss_pred ccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC-CCHHHHhhcceeecchhHHHHHH
Confidence 567666655544 23 45999999999999999999999998 55667788999997766776643
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.55 E-value=2.5e-07 Score=100.45 Aligned_cols=67 Identities=21% Similarity=0.206 Sum_probs=56.8
Q ss_pred hhHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccc--cccCCCchHHHHHHH
Q 044543 580 EHKYEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDI--VLTEPGLSVIVSAVL 646 (962)
Q Consensus 580 ~qK~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDi--vl~~~~~~~i~~~i~ 646 (962)
..|..-++.+.+. | ..|+++||+.||.+|++.|++||||++|.+..|++||+ +..+++-.++.++|+
T Consensus 208 ~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~vk~~A~~~~v~~sn~edGva~~i~ 280 (285)
T 3pgv_A 208 VSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHPELEVIGSNADDAVPRYLR 280 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCTTSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHHHHHhCCCCEecccCCcchHHHHHH
Confidence 4588888777653 3 35899999999999999999999999999999999995 666777888888875
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.54 E-value=1.9e-07 Score=92.29 Aligned_cols=111 Identities=21% Similarity=0.260 Sum_probs=86.3
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecC--H
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVF--P 579 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvs--P 579 (962)
+.+++.++++.|++.|+++.++||.....+..+.+++|+... |.... |
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~------------------------------~~~~kp~~ 86 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEI------------------------------YTGSYKKL 86 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEE------------------------------EECC--CH
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhh------------------------------ccCCCCCH
Confidence 356789999999999999999999999999999999997421 11111 2
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHH
Q 044543 580 EHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIV 642 (962)
Q Consensus 580 ~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~ 642 (962)
+--..+.+.+.-....|+|+||+.||.+|.+.|++++++.++.+..++.||+++.+.+-.+++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~~~~~~~~~~a~~v~~~~~~~g~~ 149 (162)
T 2p9j_A 87 EIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQRNGGEGAL 149 (162)
T ss_dssp HHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECSSCSSSSHH
T ss_pred HHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEecCccHHHHhhCCEEecCCCCCcHH
Confidence 222233344333345699999999999999999999999877788888999999887776666
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.51 E-value=1.8e-07 Score=99.82 Aligned_cols=66 Identities=26% Similarity=0.293 Sum_probs=55.9
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~----g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
.|..-++.+.+. ...|+++||+.||.+|++.|++|++||++.+..++.||+|+.+++-.++.++++
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~~~~~dGva~~i~ 252 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVADFVTKPVDKEGIWYGLK 252 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCCHHHHHTCSEEECCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCcHHHHHhCCEEeCCCCcchHHHHHH
Confidence 355556665542 345899999999999999999999999999999999999998888889988886
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.50 E-value=2e-07 Score=101.27 Aligned_cols=66 Identities=23% Similarity=0.235 Sum_probs=58.5
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
.|..-++.+.+. | .-|+++||+.||.+|++.|++||||++|.+..|+.||+|..+++-.++..+|+
T Consensus 211 ~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~s~~edGv~~~l~ 280 (283)
T 3dao_A 211 SKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQEVIAAAKHTCAPYWENGVLSVLK 280 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHHSSEEECCGGGTHHHHHHH
T ss_pred cHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHHHHHhcCeECCCCCCChHHHHHH
Confidence 588888877653 3 35899999999999999999999999999999999999999888888988875
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.49 E-value=3.1e-07 Score=96.54 Aligned_cols=146 Identities=23% Similarity=0.225 Sum_probs=100.8
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcc---ccc-ccc------------------hh-c
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSS---ALL-GQI------------------KD-A 557 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~---~l~-~~~------------------~~-~ 557 (962)
.+.+.+.++++++++.|+++.++||.....+..+.+.+|+........ +.. +.. .. .
T Consensus 20 ~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~~ 99 (231)
T 1wr8_A 20 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 99 (231)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCCC
Confidence 467889999999999999999999999999999999999753111000 000 000 00 0
Q ss_pred -------------------cCCcchHHHHhhh----cceE-----EecCH--hhHHHHHHHHhhC-C---CEEEEEcCCc
Q 044543 558 -------------------NISALPVDELIEK----ADGF-----AGVFP--EHKYEIVRKLQER-K---HICGMTGDGV 603 (962)
Q Consensus 558 -------------------~~~~~~~~~~~~~----~~v~-----arvsP--~qK~~iV~~lq~~-g---~~v~miGDG~ 603 (962)
..+.+.++++++. .++. ..+.| ..|...++.+.++ | ..|+++||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~ 179 (231)
T 1wr8_A 100 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 179 (231)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCCH
Confidence 0011222333322 1121 23333 3688888776653 2 4589999999
Q ss_pred CChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 604 NDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 604 ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
||.+|++.|++|++|+++.+..++.||+++.+++-.++.++++
T Consensus 180 nD~~~~~~ag~~v~~~~~~~~~~~~a~~v~~~~~e~Gv~~~l~ 222 (231)
T 1wr8_A 180 NDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIY 222 (231)
T ss_dssp GGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEecCCCHHHHhhCCEEecCCCcchHHHHHH
Confidence 9999999999999999888888889999998777777877775
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.46 E-value=1.8e-07 Score=100.47 Aligned_cols=66 Identities=23% Similarity=0.289 Sum_probs=57.8
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~----g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
.|...++.+.++ ...|+++||+.||.+|++.|++||+||++.+..++.||+|+.+++-.++.++++
T Consensus 200 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~edGv~~~l~ 269 (274)
T 3fzq_A 200 HKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIATSICEDIFDNGIYKELK 269 (274)
T ss_dssp SHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCHHHHHHCSEEECCGGGTHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccHHHHHhhhheeCCCchhHHHHHHH
Confidence 577777766553 345899999999999999999999999999999999999999888889988886
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.41 E-value=1e-06 Score=90.07 Aligned_cols=129 Identities=16% Similarity=0.141 Sum_probs=94.0
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.+.++.|++. +++.++|+.....+..+.+.+|+.... ......+.... ....-.-.|+
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f-~~~~~~~~~~~--------------~~~~~~p~p~ 132 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLL-CHKLEIDDSDR--------------VVGYQLRQKD 132 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEE-EEEEEECTTSC--------------EEEEECCSSS
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCccee-cceeEEcCCce--------------EEeeecCCCc
Confidence 5789999999999999 999999999999999999999985311 00111110000 0000124688
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
.|...++.+......|+|+||+.||++|.+.|++++++....+....+++++ .-+++..+...+.
T Consensus 133 ~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~l~ 197 (206)
T 1rku_A 133 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFP-AVHTYEDLKREFL 197 (206)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSC-EECSHHHHHHHHH
T ss_pred hHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEECCcHHHHHHHhhhc-cccchHHHHHHHH
Confidence 9999999998888899999999999999999999999865444444344554 2367888777663
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.41 E-value=2.4e-07 Score=94.86 Aligned_cols=130 Identities=14% Similarity=0.075 Sum_probs=88.9
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCC-CCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTN-MYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... .+......... +. . . ........|.
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-~----~-~~~~~~~~~~ 150 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSD------GS-F----K-ELDNSNGACD 150 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTT------SB-E----E-EEECTTSTTT
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCC------Cc-e----e-ccCCCCCCcc
Confidence 789999999999999999999999999999999999998531 11100110000 00 0 0 0011233466
Q ss_pred hHHHHHHHH-hhCCCEEEEEcCCcCChhhhhc--CCeeEE--ccCchHHHHhcccccccCCCchHHHHHH
Q 044543 581 HKYEIVRKL-QERKHICGMTGDGVNDAPALKK--ADIGIA--VADATDAARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 581 qK~~iV~~l-q~~g~~v~miGDG~ND~~aLk~--AdVGIa--mg~gt~~a~~aaDivl~~~~~~~i~~~i 645 (962)
.|.+.+..+ .-....|+|+||+.||.+|++. +.+|++ ++++.+..+..||+++ +++..+...+
T Consensus 151 ~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~--~~~~el~~~l 218 (219)
T 3kd3_A 151 SKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEHIEREKVINLSKYVA--RNVAELASLI 218 (219)
T ss_dssp CHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSSCCCHHHHHHCSEEE--SSHHHHHHHH
T ss_pred cHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCccccHHHHhhcceee--CCHHHHHHhh
Confidence 777766554 4456789999999999999976 234444 4566777888899998 5677666543
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.35 E-value=4.2e-07 Score=94.88 Aligned_cols=128 Identities=21% Similarity=0.258 Sum_probs=91.3
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.... ...-.|+
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 164 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRL--TVIAGDDSVE-----------------RGKPHPD 164 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTC--SEEECTTTSS-----------------SCTTSSH
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhhe--eeEEeCCCCC-----------------CCCCCHH
Confidence 46789999999999999999999999999999999999975321 1111111000 0111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe---eEEccC-chHHHHh-cccccccCCCchHHHHHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADI---GIAVAD-ATDAARG-ASDIVLTEPGLSVIVSAVLTSR 649 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV---GIamg~-gt~~a~~-aaDivl~~~~~~~i~~~i~~gR 649 (962)
--..+.+.+.-....|+|+||+.||+.|+++|++ +|++|. ..+..+. .||+++ +++..+...++.++
T Consensus 165 ~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~~~~el~~~l~~~~ 236 (237)
T 4ex6_A 165 MALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVV--DSFPAAVTAVLDGH 236 (237)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEE--SSHHHHHHHHHHC-
T ss_pred HHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEE--CCHHHHHHHHHccC
Confidence 3344555554445569999999999999999999 888884 4344444 799998 67889988887653
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=2.1e-07 Score=95.22 Aligned_cols=128 Identities=14% Similarity=0.119 Sum_probs=91.4
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+........++ +.... ...-.|+
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~-~~~~~-----------------~~kp~~~ 131 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVL-GRDEA-----------------PPKPHPG 131 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEE-CTTTS-----------------CCTTSSH
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEE-eCCCC-----------------CCCCCHH
Confidence 35689999999999999999999999999999999999975321001111 11000 1111222
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEccCchHHHHhcccccccCCCchHHHHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAVADATDAARGASDIVLTEPGLSVIVSAVLTS 648 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~g 648 (962)
--..+.+.+.-....|+|+||+.||..|.++|++ +|+|+++.+..++.||+++ +++..++..+...
T Consensus 132 ~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~ad~v~--~~~~el~~~~~~~ 198 (205)
T 3m9l_A 132 GLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHA--RDCAQLRDLLSAE 198 (205)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSCSCGGGCSEEC--SSHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCcccccCCEEe--CCHHHHHHHHHhc
Confidence 2233444443334569999999999999999999 9999877666677899999 6788888887643
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.35 E-value=4.4e-07 Score=99.51 Aligned_cols=67 Identities=25% Similarity=0.234 Sum_probs=58.7
Q ss_pred hhHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 580 EHKYEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 580 ~qK~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
..|..-++.+.++ | ..|+++||+.||.+|++.|++||||+++.+..+++||+|+.+++-.++.++|+
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~ 297 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVID 297 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHHHHHhccEEcCCCCcchHHHHHH
Confidence 4688877777653 3 35999999999999999999999999999999999999998888888988886
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.33 E-value=1.2e-06 Score=95.15 Aligned_cols=66 Identities=21% Similarity=0.209 Sum_probs=57.3
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
.|...++.+.+. | ..|+++||+.||.+|++.|++||+|+++.+..++.||+++.+++-.++.++++
T Consensus 198 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~a~~v~~~~~~dGV~~~l~ 267 (282)
T 1rkq_A 198 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 267 (282)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCcHHHHhhCCEEecCCCcchHHHHHH
Confidence 788888877653 2 45899999999999999999999999988889999999998888888888775
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.25 E-value=9.9e-07 Score=91.60 Aligned_cols=127 Identities=17% Similarity=0.199 Sum_probs=85.8
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCC-CCCCcccccccchhccCCcchHHHHhhhcceEEe---
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT-NMYPSSALLGQIKDANISALPVDELIEKADGFAG--- 576 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar--- 576 (962)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.. +.... .+.- .. ...+.+.
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~-~~~~-~~--------------~~~~~~~~~~ 149 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFAN-RLKF-YF--------------NGEYAGFDET 149 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEE-CEEE-CT--------------TSCEEEECTT
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEee-eEEE-cC--------------CCcEecCCCC
Confidence 578999999999999999999999999999999999999853 11110 0000 00 0000111
Q ss_pred ---cCHhhHHHHHHHHhhC-C-CEEEEEcCCcCChhhhhcCCeeEEccCc--hHHHHhcccccccCCCchHHHHHH
Q 044543 577 ---VFPEHKYEIVRKLQER-K-HICGMTGDGVNDAPALKKADIGIAVADA--TDAARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 577 ---vsP~qK~~iV~~lq~~-g-~~v~miGDG~ND~~aLk~AdVGIamg~g--t~~a~~aaDivl~~~~~~~i~~~i 645 (962)
+.+..|-.+++.+.++ | ..|+|+||+.||.+|.++|+++|+++.+ .+.....+|+++ +++..+...+
T Consensus 150 ~~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 223 (225)
T 1nnl_A 150 QPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYI--TDFVELLGEL 223 (225)
T ss_dssp SGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEE--SCGGGGCC--
T ss_pred CcccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeee--cCHHHHHHHH
Confidence 1123566666655443 3 5699999999999999999998888732 233445689988 4566655443
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.18 E-value=1e-05 Score=88.70 Aligned_cols=66 Identities=26% Similarity=0.301 Sum_probs=56.9
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhccccccc-CCCchHHHHHHH
Q 044543 581 HKYEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLT-EPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~-~~~~~~i~~~i~ 646 (962)
.|...++.+.+. | ..|+++||+.||.+|++.|++||+|+++.+..++.||+++. +++-.++..+++
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~~dGVa~~l~ 294 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLK 294 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcHHHHhhCCEEEccCCCCcHHHHHHH
Confidence 687777777653 2 35899999999999999999999999998989999999998 888888888875
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.17 E-value=5.7e-06 Score=86.13 Aligned_cols=111 Identities=17% Similarity=0.152 Sum_probs=77.1
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceE-EecCH
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGF-AGVFP 579 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~-arvsP 579 (962)
++.|++.+.++.|++.|+++.++||.....+..+.+.+|+..- ........ +....+ ... ....+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~-~~~~~~~~---~~~~~g----------~~~~~~~~~ 157 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHL-IATDPEYR---DGRYTG----------RIEGTPSFR 157 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEE-EECEEEEE---TTEEEE----------EEESSCSST
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEE-EEcceEEE---CCEEee----------eecCCCCcc
Confidence 4799999999999999999999999999999999999998521 00000000 000000 000 11234
Q ss_pred hhHHHHHHHHhh-CC------CEEEEEcCCcCChhhhhcCCeeEEccCchHHH
Q 044543 580 EHKYEIVRKLQE-RK------HICGMTGDGVNDAPALKKADIGIAVADATDAA 625 (962)
Q Consensus 580 ~qK~~iV~~lq~-~g------~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a 625 (962)
..|.+.++.+.+ .| ..|.|+||+.||.+|++.|++++++.......
T Consensus 158 ~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~~~~l~ 210 (232)
T 3fvv_A 158 EGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPGLR 210 (232)
T ss_dssp HHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESCCHHHH
T ss_pred hHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEECcCHHHH
Confidence 678777755443 44 57999999999999999999999996444433
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.15 E-value=2.1e-06 Score=88.68 Aligned_cols=127 Identities=9% Similarity=0.102 Sum_probs=88.0
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCH
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFP 579 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP 579 (962)
-++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.... ...-.|
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~ 145 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYF--DAIVGSSLDG-----------------KLSTKE 145 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEECTTS-----------------SSCSHH
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhe--eeeeccCCCC-----------------CCCCCH
Confidence 357899999999999999999999999999999999999975311 0111100000 000112
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe---eEEccCchHH--HHhcccccccCCCchHHHHHHHH
Q 044543 580 EHKYEIVRKLQERKHICGMTGDGVNDAPALKKADI---GIAVADATDA--ARGASDIVLTEPGLSVIVSAVLT 647 (962)
Q Consensus 580 ~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV---GIamg~gt~~--a~~aaDivl~~~~~~~i~~~i~~ 647 (962)
+--..+.+.+.-....|+++||+.||..|.++|++ +|++|.+... .+..||+++ +++..+...+..
T Consensus 146 ~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~s~~el~~~~~~ 216 (226)
T 3mc1_A 146 DVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIV--NSVDELHKKILE 216 (226)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEE--SSHHHHHHHHHT
T ss_pred HHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEE--CCHHHHHHHHHH
Confidence 22233444443334579999999999999999999 8888754332 357899998 678888887753
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.15 E-value=5.2e-07 Score=102.19 Aligned_cols=116 Identities=14% Similarity=0.124 Sum_probs=76.0
Q ss_pred CCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecC
Q 044543 499 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVF 578 (962)
Q Consensus 499 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvs 578 (962)
-..++|++.+.|+.||++|++|+|+||.....+..+|+++|+..+..+..++ |.......++.-..++... .--+.
T Consensus 219 gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vi-g~~l~~~~dG~~tg~~~~~---~p~~~ 294 (385)
T 4gxt_A 219 GIRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVL-GLRLMKDDEGKILPKFDKD---FPISI 294 (385)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEE-EECEEECTTCCEEEEECTT---SCCCS
T ss_pred CceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEE-EeEEEEecCCceeeeecCc---cceeC
Confidence 3457899999999999999999999999999999999999975433222222 2221100000000000000 00134
Q ss_pred HhhHHHHHHHHhhC--C-CEEEEEcCCcCChhhhhc-CCeeEEc
Q 044543 579 PEHKYEIVRKLQER--K-HICGMTGDGVNDAPALKK-ADIGIAV 618 (962)
Q Consensus 579 P~qK~~iV~~lq~~--g-~~v~miGDG~ND~~aLk~-AdVGIam 618 (962)
.+.|...++.+-+. | ..++++|||.||.+||++ +|.++++
T Consensus 295 ~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~l 338 (385)
T 4gxt_A 295 REGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSL 338 (385)
T ss_dssp THHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEE
T ss_pred CCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEE
Confidence 57899999876432 1 347788999999999986 6666655
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.10 E-value=3.9e-06 Score=89.37 Aligned_cols=126 Identities=13% Similarity=0.119 Sum_probs=85.8
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.+.++.|++.|+++.++|++....+..+.+.+|+..... ..++.+.... ...-.|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~-----------------~~kp~~~ 164 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKP-DFLVTPDDVP-----------------AGRPYPW 164 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCC-SCCBCGGGSS-----------------CCTTSSH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccCh-HheecCCccC-----------------CCCCCHH
Confidence 467899999999999999999999999888888888887643211 1111111000 0111233
Q ss_pred hHHHHHHHHhhCC-CEEEEEcCCcCChhhhhcCC---eeEEccCc------------------------hHHHHhc-ccc
Q 044543 581 HKYEIVRKLQERK-HICGMTGDGVNDAPALKKAD---IGIAVADA------------------------TDAARGA-SDI 631 (962)
Q Consensus 581 qK~~iV~~lq~~g-~~v~miGDG~ND~~aLk~Ad---VGIamg~g------------------------t~~a~~a-aDi 631 (962)
--..+.+.+.-.. ..|+++||+.||..|++.|+ +++++|++ .+..+.. ||+
T Consensus 165 ~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 244 (267)
T 1swv_A 165 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHF 244 (267)
T ss_dssp HHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCce
Confidence 3344555554444 57999999999999999999 67777754 2333344 999
Q ss_pred cccCCCchHHHHHHH
Q 044543 632 VLTEPGLSVIVSAVL 646 (962)
Q Consensus 632 vl~~~~~~~i~~~i~ 646 (962)
++ +++..+...+.
T Consensus 245 v~--~~~~el~~~l~ 257 (267)
T 1swv_A 245 TI--ETMQELESVME 257 (267)
T ss_dssp EE--SSGGGHHHHHH
T ss_pred ec--cCHHHHHHHHH
Confidence 98 66888877764
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.08 E-value=2e-06 Score=92.07 Aligned_cols=67 Identities=27% Similarity=0.332 Sum_probs=59.4
Q ss_pred hhHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 580 EHKYEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 580 ~qK~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
..|..-++.+.++ | ..|+++||+.||.+|++.|++|+||+++.+.+|++||+|..+++-.++.++++
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~ 263 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDNSGLYKALK 263 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTCSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHH
Confidence 4688888777653 3 35899999999999999999999999999999999999999999999998886
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.06 E-value=3.8e-06 Score=86.96 Aligned_cols=126 Identities=12% Similarity=0.073 Sum_probs=86.3
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.... ...-.|+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 151 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINK--INIVTRDDVS-----------------YGKPDPD 151 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTS--SCEECGGGSS-----------------CCTTSTH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhh--heeeccccCC-----------------CCCCChH
Confidence 35789999999999999999999999999999999999986421 1111111100 0111122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe---eEEcc-CchHHHHhc-ccccccCCCchHHHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADI---GIAVA-DATDAARGA-SDIVLTEPGLSVIVSAVLT 647 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV---GIamg-~gt~~a~~a-aDivl~~~~~~~i~~~i~~ 647 (962)
--..+.+.+.-....|+++||+.||..|+++|++ +|++| +..+..+.. ||+++ +++..+...++.
T Consensus 152 ~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~--~~~~el~~~l~~ 221 (233)
T 3s6j_A 152 LFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVY--EDPLDLLNHLDE 221 (233)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEE--SSHHHHHHTGGG
T ss_pred HHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEE--CCHHHHHHHHHH
Confidence 2223333333233568999999999999999999 66666 445554544 99998 678888887754
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.04 E-value=3.1e-06 Score=86.94 Aligned_cols=122 Identities=16% Similarity=0.172 Sum_probs=82.8
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.+.++.|++.|+++.++|+........+.+.+|+.... ...+...... ...-.|+
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~-----------------~~kp~~~ 154 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSF--DALASAEKLP-----------------YSKPHPQ 154 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEECTTSS-----------------CCTTSTH
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhC--cEEEeccccC-----------------CCCCChH
Confidence 45789999999999999999999999988888888888874211 1111110000 0011133
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEc----cCchHHHHhcccccccCCCchHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARGASDIVLTEPGLSVIVS 643 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIam----g~gt~~a~~aaDivl~~~~~~~i~~ 643 (962)
--..+.+.+.-....|+++||+.||.+|++.|++++++ +++.+..+..||+++ +++..+..
T Consensus 155 ~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~--~~~~el~~ 219 (226)
T 1te2_A 155 VYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKL--SSLTELTA 219 (226)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEEC--SCGGGCCH
T ss_pred HHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEE--CCHHHHhH
Confidence 33344455443445689999999999999999999998 444444577899998 44555444
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.03 E-value=3e-05 Score=83.24 Aligned_cols=66 Identities=29% Similarity=0.291 Sum_probs=56.5
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~----g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
.|...++.+.+. ...|+++||+.||.+|++.|++|++|+++.+..++.||+++.+++-.++.++++
T Consensus 190 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 677777776653 245899999999999999999999999988888889999998888888888774
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.02 E-value=7.1e-06 Score=87.56 Aligned_cols=64 Identities=22% Similarity=0.281 Sum_probs=53.6
Q ss_pred hhHHHHHHHHhhC-C-----CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 580 EHKYEIVRKLQER-K-----HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 580 ~qK~~iV~~lq~~-g-----~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
..|...++.+.++ | ..|+++||+.||.+|++.|++|++|+++.+ . +++++..+++-.++.++++
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~--~~~~~~~~~~~~gv~~~~~ 244 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP-P--EGVLATPAPGPEGFRYAVE 244 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC-C--TTCEECSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh-c--CCcEEeCCCCchHHHHHHH
Confidence 5788888877664 3 679999999999999999999999998887 3 7889988887777777764
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.02 E-value=4e-06 Score=90.96 Aligned_cols=131 Identities=17% Similarity=0.179 Sum_probs=89.1
Q ss_pred CCCccHHHHHHHHHhC-CCcEEEEcCC---------------------CHHHHHHHHHHhCCCCCCCCcccccccchhcc
Q 044543 501 PPRHDSAETIRRALNL-GVNVKMITGD---------------------QLAIAKETGRRLGMGTNMYPSSALLGQIKDAN 558 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~a-GI~v~miTGD---------------------~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~ 558 (962)
.+++++.+.++.+++. |+++.+.|.. ....+..+.+..|+...........+..
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~---- 197 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDP---- 197 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCC----
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCC----
Confidence 4678999999999998 9999888876 3334444555555421100000000000
Q ss_pred CCcchHHHHhhhcceEEecCH--hhHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhccccc
Q 044543 559 ISALPVDELIEKADGFAGVFP--EHKYEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIV 632 (962)
Q Consensus 559 ~~~~~~~~~~~~~~v~arvsP--~qK~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDiv 632 (962)
....+..+.| ..|...++.+.++ | ..|+|+||+.||.+|++.|++|++|+++.+..++.||++
T Consensus 198 -----------~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~~~~~a~~v 266 (289)
T 3gyg_A 198 -----------EDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQEAKNLHNLI 266 (289)
T ss_dssp -----------TTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCHHHHHHCCCB
T ss_pred -----------CCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccHHHHHhCCEE
Confidence 0012333333 3567767666543 3 458999999999999999999999999999999999999
Q ss_pred ccCCCchHHHHHHH
Q 044543 633 LTEPGLSVIVSAVL 646 (962)
Q Consensus 633 l~~~~~~~i~~~i~ 646 (962)
+.+++-.++.++++
T Consensus 267 ~~~~~~~gv~~~~~ 280 (289)
T 3gyg_A 267 TDSEYSKGITNTLK 280 (289)
T ss_dssp CSSCHHHHHHHHHH
T ss_pred cCCCCcCHHHHHHH
Confidence 98888778887775
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.00 E-value=7.3e-06 Score=85.11 Aligned_cols=113 Identities=12% Similarity=0.095 Sum_probs=72.8
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhh
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEH 581 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~q 581 (962)
+.+++.+.++.|++.|+++.++|+... +..+.+.+|+.... ..++.+.. .. ...-.|+-
T Consensus 93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f--~~i~~~~~---------~~--------~~Kp~~~~ 151 (233)
T 3nas_A 93 LLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDF--HAIVDPTT---------LA--------KGKPDPDI 151 (233)
T ss_dssp SCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTC--SEECCC--------------------------CCH
T ss_pred cCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhc--CEEeeHhh---------CC--------CCCCChHH
Confidence 689999999999999999999999755 67778888875321 11111100 00 01111222
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCC
Q 044543 582 KYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEP 636 (962)
Q Consensus 582 K~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~ 636 (962)
=..+.+.+.-....|+|+||+.||+.|.++|++++++.++.+..+ .||+++.+.
T Consensus 152 ~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~~~~-~ad~v~~s~ 205 (233)
T 3nas_A 152 FLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQPML-GADLVVRQT 205 (233)
T ss_dssp HHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC--------CSEECSSG
T ss_pred HHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCccccc-cCCEEeCCh
Confidence 234445554444669999999999999999999999986666555 899998543
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.96 E-value=6e-06 Score=86.73 Aligned_cols=137 Identities=14% Similarity=0.042 Sum_probs=90.0
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHh--hhcceEEecC
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELI--EKADGFAGVF 578 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~v~arvs 578 (962)
++.|++.++++.|+++|+++.++|+.....+..+.+ |+.. + ..++.+..... +..+.... .+...+-+-.
T Consensus 77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~--~-~~v~~~~~~~~---~~~~~~~~~kp~p~~~~~~~ 148 (236)
T 2fea_A 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVE--K-DRIYCNHASFD---NDYIHIDWPHSCKGTCSNQC 148 (236)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSC--G-GGEEEEEEECS---SSBCEEECTTCCCTTCCSCC
T ss_pred CCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCC--C-CeEEeeeeEEc---CCceEEecCCCCcccccccc
Confidence 578999999999999999999999999888888777 7632 1 12221111000 00000000 0001011112
Q ss_pred HhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhc--ccccccCCCchHHHHHHHH
Q 044543 579 PEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGA--SDIVLTEPGLSVIVSAVLT 647 (962)
Q Consensus 579 P~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~a--aDivl~~~~~~~i~~~i~~ 647 (962)
..+|..+++.+.-....|+|+||+.||++|.++|++.++.....+..+.. +|+++ +++..+...+..
T Consensus 149 ~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~~ 217 (236)
T 2fea_A 149 GCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPY--QDFYEIRKEIEN 217 (236)
T ss_dssp SSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECC--SSHHHHHHHHHT
T ss_pred CCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeechHHHHHHHHCCCCeeec--CCHHHHHHHHHH
Confidence 45788999988877788999999999999999999988753222333333 78887 678888877753
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=97.95 E-value=3.8e-06 Score=86.17 Aligned_cols=115 Identities=4% Similarity=-0.063 Sum_probs=77.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.+.++.|++.|+++.++|++ ..+..+.+.+|+.... ...+.+.... ...-.|+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~~ 149 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYF--DAIADPAEVA-----------------ASKPAPD 149 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGC--SEECCTTTSS-----------------SCTTSSH
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHc--ceEeccccCC-----------------CCCCChH
Confidence 46789999999999999999999998 3455667777864211 1111111000 0011122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCC
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPG 637 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~ 637 (962)
--..+.+.+.-....|+++||+.||.+|++.|+++++|.++.+..+ .||+++.+.+
T Consensus 150 ~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~-~a~~v~~~~~ 205 (221)
T 2wf7_A 150 IFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLG-DDIVIVPDTS 205 (221)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHHHC-SSSEEESSGG
T ss_pred HHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEECCHHHhc-cccchhcCHH
Confidence 2233444443334568999999999999999999999987777777 8999985543
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=97.93 E-value=5.5e-05 Score=76.44 Aligned_cols=136 Identities=12% Similarity=0.155 Sum_probs=84.1
Q ss_pred ccccCCceEEEEEeeeecccCCChHHHHHHHHHhccccCCChHHHHHHHhhcCh-hhh-hcCceEeeecCCCCCCceEEE
Q 044543 345 GTLTLNKLTVDKNLVEVFVKDMDKDTVILYGARASRVENQDAIDACIVGMLGDA-KEA-RAGITELHFLPFNPVEKRTAI 422 (962)
Q Consensus 345 GTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~-~~~-~~~~~~l~~~pF~s~~kr~sv 422 (962)
||||+|+++|.++.......+.+.++++.+++.++..++ ||+..|++.++... ... ....+..+..|- +-...
T Consensus 1 GTLT~G~p~V~~v~~~~~~~~~~~~~lL~laaa~E~~Se-HPlA~AIv~~a~~~~~~~~~~~~~~f~~i~G----~Gv~~ 75 (185)
T 2kmv_A 1 SFTMHGTPVVNQVKVLTESNRISHHKILAIVGTAESNSE-HPLGTAITKYCKQELDTETLGTCIDFQVVPG----CGISC 75 (185)
T ss_dssp CCCCSCCCEEEEEEECSCTTTSCHHHHHHHHHHGGGSSS-CHHHHHHHHHHHHHHTCSCCCCCBCCEEETT----TEEEE
T ss_pred CCCcCCcEEEEEEEecCCcCCCCHHHHHHHHHHHHccCC-CHHHHHHHHHHHhhcCCCCCCCccceEEecc----ceEEE
Confidence 899999999998653111124577888888888876655 99999999987431 100 011111222221 12222
Q ss_pred EEEcCCC-----------------------------------------------CEEEEEeCcHHHHHHHhccchHHHHH
Q 044543 423 TYIDSDG-----------------------------------------------SWHRISKGAPEQIIELCNLREDVRNK 455 (962)
Q Consensus 423 ~~~~~~g-----------------------------------------------~~~~~~KGa~e~il~~~~~~~~~~~~ 455 (962)
.+...++ +.+.+..|+++.+.+..- .+.+.
T Consensus 76 ~V~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi---~i~~~ 152 (185)
T 2kmv_A 76 KVTNIEGLLHKNNWNIEDNNIKNASLVQIDASNEQSSTSSSMIIDAQISNALNAQQYKVLIGNREWMIRNGL---VINND 152 (185)
T ss_dssp EECCSGGGSSCSSCCCCSCCCCCCCCCCTTTTSCCCCCCCCCCCSTTTTTGGGSCCEEEEEECHHHHHHHTC---CCCHH
T ss_pred EECCccccccccccccccccccccccccccccccccccccccccccccccccCCCceEEEECCHHHHHHcCC---CCCHH
Confidence 2221000 115788999998765321 11223
Q ss_pred HHHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCC
Q 044543 456 AHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDP 501 (962)
Q Consensus 456 ~~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~ 501 (962)
....++++..+|..++.+|... +++|++++.|+
T Consensus 153 ~~~~~~~~~~~G~T~V~vaidg-------------~l~g~iavaD~ 185 (185)
T 2kmv_A 153 VNDFMTEHERKGRTAVLVAVDD-------------ELCGLIAIADT 185 (185)
T ss_dssp HHHHHHHHHHTTCEEEEEEETT-------------EEEEEEEEECC
T ss_pred HHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEEEcC
Confidence 4455677788999999999865 89999999995
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=97.92 E-value=4.1e-06 Score=85.96 Aligned_cols=123 Identities=14% Similarity=0.066 Sum_probs=78.3
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhh
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEH 581 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~q 581 (962)
+.+++.+.++.|++.|+++.++|+..........+.+|+.... ...+...... ...-.|+-
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-----------------~~k~~~~~ 150 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWF--DIIIGGEDVT-----------------HHKPDPEG 150 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCC--SEEECGGGCS-----------------SCTTSTHH
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhhe--eeeeehhhcC-----------------CCCCChHH
Confidence 4689999999999999999999999988888888888875321 1111110000 00001222
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEc----cCchHHHHhc-ccccccCCCchHHHHHH
Q 044543 582 KYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARGA-SDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 582 K~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIam----g~gt~~a~~a-aDivl~~~~~~~i~~~i 645 (962)
-..+.+.+.-....|+++||+.||.+|++.|++++++ +++.+..+.. ||+++ +++..+...+
T Consensus 151 ~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~--~~~~el~~~l 217 (225)
T 3d6j_A 151 LLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRII--STLGQLISVP 217 (225)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEE--SSGGGGC---
T ss_pred HHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEE--CCHHHHHHhh
Confidence 2233344333334588999999999999999998877 3333334444 89988 4555665555
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.92 E-value=5.9e-06 Score=86.43 Aligned_cols=124 Identities=13% Similarity=0.061 Sum_probs=84.1
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.... ...-.|+
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 170 (240)
T 3sd7_A 110 KIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYF--KYIAGSNLDG-----------------TRVNKNE 170 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEECTTS-----------------CCCCHHH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhE--EEEEeccccC-----------------CCCCCHH
Confidence 46899999999999999999999999999999999999985311 0111100000 0001122
Q ss_pred hHHHHHHHHhhC-CCEEEEEcCCcCChhhhhcCCe---eEEccCchH--HHHhcccccccCCCchHHHHHH
Q 044543 581 HKYEIVRKLQER-KHICGMTGDGVNDAPALKKADI---GIAVADATD--AARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 581 qK~~iV~~lq~~-g~~v~miGDG~ND~~aLk~AdV---GIamg~gt~--~a~~aaDivl~~~~~~~i~~~i 645 (962)
--..+.+.+.-. ...|+++||+.||..|.++|++ ++++|.+.. ..+..+|+++ +++..+...|
T Consensus 171 ~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~--~~~~el~~~l 239 (240)
T 3sd7_A 171 VIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIV--ENVESIKDIL 239 (240)
T ss_dssp HHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEE--SSSTTHHHHH
T ss_pred HHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEE--CCHHHHHHHh
Confidence 222334444434 5568999999999999999999 777664433 3357899998 5577776654
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.90 E-value=5.8e-06 Score=83.35 Aligned_cols=119 Identities=17% Similarity=0.095 Sum_probs=80.7
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.+.++.|++.|+++.++|++...... ..+.+|+.... ...+...... ...-.|+
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f--~~~~~~~~~~-----------------~~Kp~~~ 144 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYF--TEILTSQSGF-----------------VRKPSPE 144 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGE--EEEECGGGCC-----------------CCTTSSH
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhe--eeEEecCcCC-----------------CCCCCcH
Confidence 36799999999999999999999999988877 77888874210 0111110000 0011122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEccCchHHHHhcccccccCCCchHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG-IAVADATDAARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG-Iamg~gt~~a~~aaDivl~~~~~~~i~~~i 645 (962)
--..+.+.++-....|+++||+.||.+|++.|+++ |+|++|. . .||+++ +++..+...+
T Consensus 145 ~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~---~a~~v~--~~~~el~~~l 204 (207)
T 2go7_A 145 AATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y---EGNHRI--QALADISRIF 204 (207)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS-C---TTEEEC--SSTTHHHHHT
T ss_pred HHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEecCC-C---CCCEEe--CCHHHHHHHH
Confidence 23344555544445689999999999999999997 8888665 2 689988 4566665544
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.89 E-value=4.1e-06 Score=88.36 Aligned_cols=122 Identities=17% Similarity=0.138 Sum_probs=82.7
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.... ...-.|+
T Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f--~~~~~~~~~~-----------------~~Kp~~~ 174 (243)
T 2hsz_A 114 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF--SEMLGGQSLP-----------------EIKPHPA 174 (243)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECTTTSS-----------------SCTTSSH
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheE--EEEEecccCC-----------------CCCcCHH
Confidence 56799999999999999999999999999999999999975321 1111111000 0011233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeE-EccC----chHHHHhcccccccCCCchHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGI-AVAD----ATDAARGASDIVLTEPGLSVIVS 643 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGI-amg~----gt~~a~~aaDivl~~~~~~~i~~ 643 (962)
--..+.+.+.-....|+|+||+.||++|.+.|++++ .+.. +.+..+..+|+++ +++..+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi--~~~~el~~ 240 (243)
T 2hsz_A 175 PFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIF--DDFADILK 240 (243)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEE--SSGGGGGG
T ss_pred HHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEE--CCHHHHHH
Confidence 344455555444556999999999999999999884 4432 2334466789988 45655543
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.89 E-value=6.6e-06 Score=85.34 Aligned_cols=126 Identities=10% Similarity=0.020 Sum_probs=89.9
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++...... ...-.|+
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 159 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLF--DHVLSVDAVR-----------------LYKTAPA 159 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTC--SEEEEGGGTT-----------------CCTTSHH
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhc--CEEEEecccC-----------------CCCcCHH
Confidence 46789999999999999999999999999999988999985421 1111111000 1111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEc----cCchHHHHhcccccccCCCchHHHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARGASDIVLTEPGLSVIVSAVLT 647 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIam----g~gt~~a~~aaDivl~~~~~~~i~~~i~~ 647 (962)
--..+.+.+.-....|+|+||+.||+.|.+.|++++++ +++.+..+..+|+++ +++..+...+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~--~~~~el~~~l~~ 228 (233)
T 3umb_A 160 AYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAG--HDMRDLLQFVQA 228 (233)
T ss_dssp HHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEE--SSHHHHHHHHHC
T ss_pred HHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEE--CCHHHHHHHHHH
Confidence 33344455544445699999999999999999999999 444444456799998 678888887753
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.87 E-value=4e-05 Score=82.65 Aligned_cols=66 Identities=18% Similarity=0.104 Sum_probs=33.6
Q ss_pred hHHHHHHHHhhC-C----CE--EEEEcCCcCChhhhhcCCeeEEccCch---HHHHhc--cc-ccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQER-K----HI--CGMTGDGVNDAPALKKADIGIAVADAT---DAARGA--SD-IVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~-g----~~--v~miGDG~ND~~aLk~AdVGIamg~gt---~~a~~a--aD-ivl~~~~~~~i~~~i~ 646 (962)
.|...++.+.+. | .. |+++||+.||.+|++.|++||+|+++. +..++. || ++..+++-.++.++++
T Consensus 189 ~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l~ 267 (275)
T 1xvi_A 189 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLD 267 (275)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECCCCC------------------------------
T ss_pred CHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEecCCCccchhhccccCCceeEccCCCchHHHHHHH
Confidence 466666555432 2 34 899999999999999999999999886 555543 78 8888878778877775
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=97.85 E-value=2.6e-05 Score=80.75 Aligned_cols=124 Identities=17% Similarity=0.129 Sum_probs=87.2
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.+.++.|++. +++.++|+.....+....+.+|+.... ..++.+... ....-.|+
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f--~~~~~~~~~-----------------~~~kp~~~ 159 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLF--DSITTSEEA-----------------GFFKPHPR 159 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEHHHH-----------------TBCTTSHH
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHc--ceeEecccc-----------------CCCCcCHH
Confidence 4679999999999999 999999999999888998999874311 011110000 01111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCc-CChhhhhcCC---eeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGV-NDAPALKKAD---IGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~-ND~~aLk~Ad---VGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
--..+.+.+.-....|+++||+. ||..|.+.|+ ++++++++.+..+..+|+++ +++..+...+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~--~~~~el~~~l~ 227 (234)
T 3u26_A 160 IFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVD 227 (234)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEE--SSTHHHHHHHH
T ss_pred HHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEee--CCHHHHHHHHH
Confidence 33344445443445699999997 9999999999 67777766666666899998 66888877764
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.84 E-value=7e-06 Score=84.85 Aligned_cols=124 Identities=11% Similarity=0.076 Sum_probs=85.8
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.... ...-.|+
T Consensus 96 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 156 (230)
T 3um9_A 96 TPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSF--DHLISVDEVR-----------------LFKPHQK 156 (230)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGC--SEEEEGGGTT-----------------CCTTCHH
T ss_pred CCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhc--ceeEehhhcc-----------------cCCCChH
Confidence 57899999999999999999999999999899999999975321 0111110000 0111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEc----cCchHHHHhcccccccCCCchHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAV----ADATDAARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIam----g~gt~~a~~aaDivl~~~~~~~i~~~i 645 (962)
--..+.+.+.-....|+++||+.||+.|.++|++++++ +++.+..+..+|+++ +++..+...+
T Consensus 157 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 223 (230)
T 3um9_A 157 VYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVV--SDVGVLASRF 223 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEE--SSHHHHHHTC
T ss_pred HHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEe--CCHHHHHHHH
Confidence 33344444443445689999999999999999999998 334444456789988 5677776554
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=97.84 E-value=8.2e-06 Score=84.67 Aligned_cols=124 Identities=16% Similarity=0.103 Sum_probs=85.0
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.++++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+... ....-.|+
T Consensus 83 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~-----------------~~~Kp~~~ 143 (222)
T 2nyv_A 83 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYF--DLIVGGDTF-----------------GEKKPSPT 143 (222)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECTTSS-----------------CTTCCTTH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHh--eEEEecCcC-----------------CCCCCChH
Confidence 46899999999999999999999999999899999999974311 111111100 00112244
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEccCc--hHHHHhcccccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG-IAVADA--TDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG-Iamg~g--t~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
--..+.+.+.-....|+|+||+.||.+|.++|++. |++..| .... ..+|+++ +++..+...+.
T Consensus 144 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~--~~~~el~~~l~ 209 (222)
T 2nyv_A 144 PVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTL--SRPSDLVKLMD 209 (222)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEE--SSTTHHHHHHH
T ss_pred HHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEE--CCHHHHHHHHH
Confidence 44455555544455689999999999999999987 666422 2111 5688888 56777776654
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.84 E-value=2.9e-05 Score=80.40 Aligned_cols=120 Identities=13% Similarity=0.086 Sum_probs=77.6
Q ss_pred CCccHHHHHHHHHhC-CCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 502 PRHDSAETIRRALNL-GVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 502 lr~~~~~~I~~l~~a-GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
+.+++.+.++.|++. |+++.++|+.....+....+.+|+.... . ..+.+.. +.. .|.
T Consensus 94 ~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f-~-~~~~~~~------------------~~~--~~k 151 (234)
T 2hcf_A 94 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF-P-FGAFADD------------------ALD--RNE 151 (234)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC-S-CEECTTT------------------CSS--GGG
T ss_pred cCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhc-C-cceecCC------------------CcC--ccc
Confidence 579999999999999 9999999999999888888888875421 1 1111110 000 011
Q ss_pred hHH----HHHHHHh--hCCCEEEEEcCCcCChhhhhcCCe---eEEccCchHH-HHh-cccccccCCCchHHHHHH
Q 044543 581 HKY----EIVRKLQ--ERKHICGMTGDGVNDAPALKKADI---GIAVADATDA-ARG-ASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 581 qK~----~iV~~lq--~~g~~v~miGDG~ND~~aLk~AdV---GIamg~gt~~-a~~-aaDivl~~~~~~~i~~~i 645 (962)
-+. .+.+.+. -....|+|+||+.||.+|.+.|++ +++.+.+... .+. .+|+++. ++..+...+
T Consensus 152 ~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~--~~~el~~~l 225 (234)
T 2hcf_A 152 LPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFK--NFAETDEVL 225 (234)
T ss_dssp HHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEES--CSCCHHHHH
T ss_pred hHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeC--CHHhHHHHH
Confidence 122 2233333 223468999999999999999994 4555543332 222 3899884 455555554
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.83 E-value=2e-05 Score=83.96 Aligned_cols=126 Identities=11% Similarity=0.091 Sum_probs=84.9
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+..... ..++.+.... ...-.|+
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~-----------------~~kp~~~ 172 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTP-ASTVFATDVV-----------------RGRPFPD 172 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCC-SEEECGGGSS-----------------SCTTSSH
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCC-ceEecHHhcC-----------------CCCCCHH
Confidence 467899999999999999999999999998888888888643211 1111111000 0011122
Q ss_pred hHHHHHHHHhhCC-CEEEEEcCCcCChhhhhcCC---eeEEccCc------------------------hHHHH-hcccc
Q 044543 581 HKYEIVRKLQERK-HICGMTGDGVNDAPALKKAD---IGIAVADA------------------------TDAAR-GASDI 631 (962)
Q Consensus 581 qK~~iV~~lq~~g-~~v~miGDG~ND~~aLk~Ad---VGIamg~g------------------------t~~a~-~aaDi 631 (962)
--..+.+.+.-.. ..|+|+||+.||+.|.++|+ |+|++|.+ .+..+ ..+|+
T Consensus 173 ~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~ 252 (277)
T 3iru_A 173 MALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHY 252 (277)
T ss_dssp HHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCE
Confidence 2234445554445 67999999999999999999 56666632 23333 34999
Q ss_pred cccCCCchHHHHHHH
Q 044543 632 VLTEPGLSVIVSAVL 646 (962)
Q Consensus 632 vl~~~~~~~i~~~i~ 646 (962)
++ +++..+...+.
T Consensus 253 v~--~~~~el~~~l~ 265 (277)
T 3iru_A 253 VI--DSVADLETVIT 265 (277)
T ss_dssp EE--SSGGGTHHHHH
T ss_pred Ee--cCHHHHHHHHH
Confidence 99 67888887775
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.82 E-value=1.7e-05 Score=82.85 Aligned_cols=127 Identities=10% Similarity=0.003 Sum_probs=79.9
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCH
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFP 579 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP 579 (962)
.++.+++.+.++.|++.|+++.++|+.....+....+. |+.....+..++.+.... ...-.|
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~-----------------~~kp~~ 168 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVK-----------------YGKPNP 168 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCS-----------------SCTTSS
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCC-----------------CCCCCC
Confidence 35789999999999999999999999887777777776 775321101112111100 011123
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEccC--ch--HHHHhcccccccCCCchHHHHHHH
Q 044543 580 EHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG-IAVAD--AT--DAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 580 ~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG-Iamg~--gt--~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
+--..+.+.+.-....|+|+||+.||..|.++|+++ |++.. .. +..+..||+++ +++..+...+.
T Consensus 169 ~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~--~~~~el~~~l~ 238 (247)
T 3dv9_A 169 EPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLF--HSMPDFNKNWE 238 (247)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEE--CCHHHHHHHHH
Confidence 333344444444445699999999999999999974 44432 22 22334799998 66877777665
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.82 E-value=1.4e-05 Score=83.85 Aligned_cols=126 Identities=13% Similarity=0.081 Sum_probs=81.6
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.+.++.|++.|+++.++|+.....+....+. |+........++.+.... ...-.|+
T Consensus 109 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~-----------------~~kp~~~ 170 (243)
T 3qxg_A 109 ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVK-----------------YGKPNPE 170 (243)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCS-----------------SCTTSSH
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCC-----------------CCCCChH
Confidence 5679999999999999999999999887777776666 775321101112111100 0111222
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEccCch----HHHHhcccccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAVADAT----DAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIamg~gt----~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
--..+.+.+.-....|+++||+.||+.|.++|++ +|.+..|. +..+..||+++ +++..+...+.
T Consensus 171 ~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~--~s~~el~~~l~ 239 (243)
T 3qxg_A 171 PYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLF--PSMQTLCDSWD 239 (243)
T ss_dssp HHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEE--SCHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEE--CCHHHHHHHHH
Confidence 2233444443334568999999999999999998 45554332 22334699998 67888877664
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.81 E-value=1.8e-05 Score=81.77 Aligned_cols=124 Identities=9% Similarity=0.047 Sum_probs=81.6
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCC---HHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecC
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQ---LAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVF 578 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~---~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvs 578 (962)
+.+++.+.++.|++.|+++.++|+.. ........+.+|+.... ..++.+.... ...-.
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~ 160 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFI--DKTFFADEVL-----------------SYKPR 160 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGC--SEEEEHHHHT-----------------CCTTC
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHh--hhheeccccC-----------------CCCCC
Confidence 47999999999999999999999999 88888888888874311 1111110000 00111
Q ss_pred HhhHHHHHHHHhhCCCEEEEEcCCc-CChhhhhcCCeeEEc---cCchHHHHhcccccccCCCchHHHHHHH
Q 044543 579 PEHKYEIVRKLQERKHICGMTGDGV-NDAPALKKADIGIAV---ADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 579 P~qK~~iV~~lq~~g~~v~miGDG~-ND~~aLk~AdVGIam---g~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
|+--..+.+.+.-....|+++||+. ||..|++.|++++++ +++.+..+..+|+++ +++..+...+.
T Consensus 161 ~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 230 (235)
T 2om6_A 161 KEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEI--PSIANLKDVIE 230 (235)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEE--SSGGGHHHHHH
T ss_pred HHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchH--hhHHHHHHHHH
Confidence 2222233333333345699999999 999999999999998 322222234578887 56777776663
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.80 E-value=1.7e-05 Score=83.99 Aligned_cols=128 Identities=16% Similarity=0.064 Sum_probs=84.6
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...++.+.... ....-.|+
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f-~~~i~~~~~~~----------------~~~Kp~~~ 172 (259)
T 4eek_A 110 TAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELA-GEHIYDPSWVG----------------GRGKPHPD 172 (259)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHH-CSCEECGGGGT----------------TCCTTSSH
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhc-cceEEeHhhcC----------------cCCCCChH
Confidence 35789999999999999999999999999999999999874210 00011110000 00111122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEccCc-------h-HHHHhcccccccCCCchHHHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG-IAVADA-------T-DAARGASDIVLTEPGLSVIVSAVLT 647 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG-Iamg~g-------t-~~a~~aaDivl~~~~~~~i~~~i~~ 647 (962)
--..+.+.+.-....|+++||+.||+.|.++|+++ |.+..| . +..+..+|+++ +++..+...+..
T Consensus 173 ~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi--~~l~el~~~l~~ 246 (259)
T 4eek_A 173 LYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVL--TSHAELRAALAE 246 (259)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEE--CSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhh--CCHHHHHHHHHh
Confidence 22233344433345699999999999999999998 555433 2 33344589998 678888888764
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=97.79 E-value=2e-05 Score=81.69 Aligned_cols=122 Identities=8% Similarity=0.018 Sum_probs=82.0
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.... ...-.|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~-----------------~~Kp~~~ 163 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYF--DSIIGSGDTG-----------------TIKPSPE 163 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEETSSS-----------------CCTTSSH
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhhe--eeEEcccccC-----------------CCCCChH
Confidence 36899999999999999999999999999999999999975311 0111110000 0111223
Q ss_pred hHHHHHHHHhhCCC-EEEEEcCCcCChhhhhcCCe-eEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQERKH-ICGMTGDGVNDAPALKKADI-GIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~g~-~v~miGDG~ND~~aLk~AdV-GIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
--..+.+.+.-... .|+++||+.||..|.++|++ +|.++++.+ ..+|+++ +++..+...+.
T Consensus 164 ~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~---~~~~~~~--~~~~el~~~l~ 226 (231)
T 3kzx_A 164 PVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI---IKDILSF--KNFYDIRNFIC 226 (231)
T ss_dssp HHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEECC--------CCEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC---CCCceee--CCHHHHHHHHH
Confidence 33344555544444 68999999999999999997 777776554 3567777 56877777664
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.74 E-value=3.8e-05 Score=76.70 Aligned_cols=126 Identities=13% Similarity=0.093 Sum_probs=80.4
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCH---------------HHHHHHHHHhC--CCCCCCCcccccccchhccCCcch
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIAKETGRRLG--MGTNMYPSSALLGQIKDANISALP 563 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~---------------~tA~~ia~~~G--i~~~~~~~~~l~~~~~~~~~~~~~ 563 (962)
++.|++.+++++|++.|+++.++|+... ..+....+++| +..- +......+...
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~-~~~~~~~~~~~-------- 97 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAI-FMCPHGPDDGC-------- 97 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEE-EEECCCTTSCC--------
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEE-EEcCCCCCCCC--------
Confidence 5789999999999999999999999875 55566667777 3210 00000000000
Q ss_pred HHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe---eEEccCchHHHH----hcccccccCC
Q 044543 564 VDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADI---GIAVADATDAAR----GASDIVLTEP 636 (962)
Q Consensus 564 ~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV---GIamg~gt~~a~----~aaDivl~~~ 636 (962)
.+..-.|+-=..+.+.+.-....++|+||+.||..|.++|++ +|..|.+..... ..+|+++ +
T Consensus 98 ---------~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~--~ 166 (179)
T 3l8h_A 98 ---------ACRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVC--E 166 (179)
T ss_dssp ---------SSSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEE--S
T ss_pred ---------CCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEe--c
Confidence 001111222233444444445669999999999999999995 666665555444 4579998 6
Q ss_pred CchHHHHHHH
Q 044543 637 GLSVIVSAVL 646 (962)
Q Consensus 637 ~~~~i~~~i~ 646 (962)
++..+...+.
T Consensus 167 ~l~el~~~l~ 176 (179)
T 3l8h_A 167 DLAAVAEQLL 176 (179)
T ss_dssp SHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 6888777664
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=97.71 E-value=8.9e-06 Score=82.57 Aligned_cols=121 Identities=13% Similarity=0.067 Sum_probs=82.1
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.... ...-.|+
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 149 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFF--DIVLSGEEFK-----------------ESKPNPE 149 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGCS-----------------SCTTSSH
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhhe--eeEeeccccc-----------------CCCCChH
Confidence 46899999999999999999999999999999999999985321 1111111000 0111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEcc-C-chHHHHhcccccccCCCchHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVA-D-ATDAARGASDIVLTEPGLSVIV 642 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg-~-gt~~a~~aaDivl~~~~~~~i~ 642 (962)
--..+.+.+.-....|+++||+.||..|.++|++++.+. . +....+..+|+++ +++..+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~--~~~~el~ 211 (214)
T 3e58_A 150 IYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLL--DSLTDVL 211 (214)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEE--SSGGGGG
T ss_pred HHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHH--HHHHHHH
Confidence 333444555444456999999999999999999988874 2 2333346788888 4555544
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.70 E-value=1.4e-05 Score=85.99 Aligned_cols=128 Identities=10% Similarity=0.029 Sum_probs=83.8
Q ss_pred CCCccHHHHHHHHHhCCC--cEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecC
Q 044543 501 PPRHDSAETIRRALNLGV--NVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVF 578 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI--~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvs 578 (962)
++.+++.+.++.|++.|+ ++.++|+.....+....+.+|+.... ..++.+..... ....+.-.
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~f--d~v~~~~~~~~-------------~~~~~Kp~ 206 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLF--DGLTYCDYSRT-------------DTLVCKPH 206 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSC--SEEECCCCSSC-------------SSCCCTTS
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCccccc--ceEEEeccCCC-------------cccCCCcC
Confidence 578999999999999999 99999999999999999999986421 11111100000 00011112
Q ss_pred HhhHHHHHHHHhhCC-CEEEEEcCCcCChhhhhcCCeeEEccCchHHH------HhcccccccCCCchHHHHHH
Q 044543 579 PEHKYEIVRKLQERK-HICGMTGDGVNDAPALKKADIGIAVADATDAA------RGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 579 P~qK~~iV~~lq~~g-~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a------~~aaDivl~~~~~~~i~~~i 645 (962)
|+-=..+.+.+.-.. ..|+|+||+.||..|.++|++|.+|+.+.... ...||+++ +++..+..++
T Consensus 207 ~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi--~sl~el~~~l 278 (282)
T 3nuq_A 207 VKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVI--SDILELPHVV 278 (282)
T ss_dssp HHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEE--SSGGGGGGTS
T ss_pred HHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEe--CCHHHHHHHh
Confidence 222233344444344 67999999999999999999998885222211 23788888 5566665543
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.70 E-value=2.6e-05 Score=81.49 Aligned_cols=124 Identities=12% Similarity=0.036 Sum_probs=82.4
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.... ...-.|+
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~~ 165 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVL--DSCLSADDLK-----------------IYKPDPR 165 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGTT-----------------CCTTSHH
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHc--CEEEEccccC-----------------CCCCCHH
Confidence 47899999999999999999999999999899999999975321 1111111000 1111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEE---ccCchHHHHhcc-cccccCCCchHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIA---VADATDAARGAS-DIVLTEPGLSVIVSAV 645 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIa---mg~gt~~a~~aa-Divl~~~~~~~i~~~i 645 (962)
--..+.+.+.-....|+++||+.||+.|.+.|++... .+.+.+..+..+ |+++ +++..+...+
T Consensus 166 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 232 (240)
T 2no4_A 166 IYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQV--NSLSELWPLL 232 (240)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEE--SSGGGHHHHH
T ss_pred HHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceee--CCHHHHHHHH
Confidence 3344445554344568999999999999999996543 343322223456 8888 5677777655
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00014 Score=76.08 Aligned_cols=125 Identities=13% Similarity=0.169 Sum_probs=82.3
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.... ...-.|+
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~~ 154 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFF--EHVIISDFEG-----------------VKKPHPK 154 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGC--SEEEEGGGGT-----------------CCTTCHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhc--cEEEEeCCCC-----------------CCCCCHH
Confidence 36789999999999999999999999988888888999875321 1111111000 0111122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCc-CChhhhhcCCeeEEc---cCchHHHHh---cccccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGV-NDAPALKKADIGIAV---ADATDAARG---ASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~-ND~~aLk~AdVGIam---g~gt~~a~~---aaDivl~~~~~~~i~~~i~ 646 (962)
-=..+.+.+.-....|+|+||+. ||..|.+.|+++... |.+...... .+|+++ +++..+...+.
T Consensus 155 ~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~l~ 225 (241)
T 2hoq_A 155 IFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEI--DNLESLLEVLA 225 (241)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEE--SSTTHHHHHHH
T ss_pred HHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEE--CCHHHHHHHHH
Confidence 22333444443445689999998 999999999997554 433333332 689888 55777766653
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.63 E-value=1.6e-05 Score=82.43 Aligned_cols=124 Identities=9% Similarity=0.049 Sum_probs=84.0
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.... ...-.|+
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~~ 155 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF--DHLLSVDPVQ-----------------VYKPDNR 155 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEESGGGT-----------------CCTTSHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhh--heEEEecccC-----------------CCCCCHH
Confidence 46799999999999999999999999998888888999874311 1111111000 1112233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEcc----CchHHHHhcccccccCCCchHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVA----DATDAARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg----~gt~~a~~aaDivl~~~~~~~i~~~i 645 (962)
--..+.+.+.-....|+|+||+.||..|.++|+++.++- +..+..+..+|+++ +++..+...+
T Consensus 156 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 222 (232)
T 1zrn_A 156 VYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVELF 222 (232)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHTTC
T ss_pred HHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEE--CCHHHHHHHH
Confidence 344455555444456889999999999999999998872 22222344688887 5566666544
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=97.62 E-value=2.9e-05 Score=83.41 Aligned_cols=67 Identities=21% Similarity=0.237 Sum_probs=57.6
Q ss_pred hhHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 580 EHKYEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 580 ~qK~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
..|...++.+.+. | ..|+++||+.||.+|++.|++|++|+++.+..++.||+++.+++-.++.++++
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~dGVa~~l~ 260 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 260 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccHHHHHhCCeeCcCCCCChHHHHHH
Confidence 3788888777653 3 45899999999999999999999999998989999999998887788888775
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=97.59 E-value=2.3e-05 Score=82.70 Aligned_cols=67 Identities=13% Similarity=0.229 Sum_probs=54.7
Q ss_pred EecCHh--hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcC--CeeEEccCchHHHHhcccccccC-CCchHHHHHHH
Q 044543 575 AGVFPE--HKYEIVRKLQERKHICGMTGDGVNDAPALKKA--DIGIAVADATDAARGASDIVLTE-PGLSVIVSAVL 646 (962)
Q Consensus 575 arvsP~--qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~A--dVGIamg~gt~~a~~aaDivl~~-~~~~~i~~~i~ 646 (962)
-.+.|. .|..-++.|.+.-. |+++||+.||.+||+.| ++||||+++ ++.||+++.+ ++-..+..+++
T Consensus 152 lei~~~~~~Kg~al~~l~~~~g-via~GD~~ND~~Ml~~a~~g~~vam~Na----~~~A~~v~~~~~~~~gV~~~l~ 223 (239)
T 1u02_A 152 IELRVPGVNKGSAIRSVRGERP-AIIAGDDATDEAAFEANDDALTIKVGEG----ETHAKFHVADYIEMRKILKFIE 223 (239)
T ss_dssp EEEECTTCCHHHHHHHHHTTSC-EEEEESSHHHHHHHHTTTTSEEEEESSS----CCCCSEEESSHHHHHHHHHHHH
T ss_pred EEEEcCCCCHHHHHHHHHhhCC-eEEEeCCCccHHHHHHhhCCcEEEECCC----CCcceEEeCCCCCHHHHHHHHH
Confidence 344454 79999999987633 99999999999999999 999999987 6789999876 55667777664
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.57 E-value=5.8e-05 Score=77.61 Aligned_cols=115 Identities=12% Similarity=-0.022 Sum_probs=78.9
Q ss_pred CCCccHHHHHHHHHhCC-CcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCH
Q 044543 501 PPRHDSAETIRRALNLG-VNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFP 579 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aG-I~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP 579 (962)
++.+++.+.++.|++.| +++.++|+........+.+.+|+.... . .+++.-.|
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f-~-------------------------~~~~~~kp 158 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYF-D-------------------------HIEVMSDK 158 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGC-S-------------------------EEEEESCC
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhh-h-------------------------eeeecCCC
Confidence 46789999999999999 999999999988888888888874311 0 01222222
Q ss_pred hhHHHHHHH----HhhCCCEEEEEcCCc-CChhhhhcCCeeEEc-------cCchHHHHhc-ccccccCCCchHHHHHH
Q 044543 580 EHKYEIVRK----LQERKHICGMTGDGV-NDAPALKKADIGIAV-------ADATDAARGA-SDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 580 ~qK~~iV~~----lq~~g~~v~miGDG~-ND~~aLk~AdVGIam-------g~gt~~a~~a-aDivl~~~~~~~i~~~i 645 (962)
|...++. +.-....|+++||+. ||..|.++|+++.++ |.+....... +|+++ +++..++..+
T Consensus 159 --k~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~--~~l~el~~~l 233 (234)
T 3ddh_A 159 --TEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQV--KRLDDLLSLL 233 (234)
T ss_dssp --SHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEEC--SSGGGHHHHC
T ss_pred --CHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceec--ccHHHHHHhc
Confidence 3333333 322345689999996 999999999998877 2233222333 48888 6677776543
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.56 E-value=3.8e-05 Score=83.29 Aligned_cols=66 Identities=20% Similarity=0.309 Sum_probs=57.4
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
+|...++.+.+. | ..|+++||+.||.+|++.|++|++|+++.+..++.||+++.+++-.++.++++
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~ 285 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 285 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCHHHHhhCceeecCCCcChHHHHHH
Confidence 688878777653 2 45899999999999999999999999998989999999998888888888875
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00011 Score=75.94 Aligned_cols=135 Identities=16% Similarity=0.117 Sum_probs=81.7
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCC---------------HHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHH
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQ---------------LAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVD 565 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~---------------~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~ 565 (962)
++.+++.+++++|+++|+++.++|+.. ...+..+.+++|+.- ..........+. ....
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f---~~~~~~~~~~~~-~~~~--- 122 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDL---DGIYYCPHHPQG-SVEE--- 122 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCC---SEEEEECCBTTC-SSGG---
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCce---EEEEECCcCCCC-cccc---
Confidence 678999999999999999999999998 466777888888741 111110000000 0000
Q ss_pred HHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee--EEc--cC-chHHHHhcccccccCCCchH
Q 044543 566 ELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG--IAV--AD-ATDAARGASDIVLTEPGLSV 640 (962)
Q Consensus 566 ~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG--Iam--g~-gt~~a~~aaDivl~~~~~~~ 640 (962)
......+..-.|+--..+.+.+.-....++||||+.||..+.++|++. |.+ |. ..+.....+|+++ +++..
T Consensus 123 --~~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi--~~l~e 198 (211)
T 2gmw_A 123 --FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLAD 198 (211)
T ss_dssp --GBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGG
T ss_pred --cCccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEe--CCHHH
Confidence 000000111123333334444443345689999999999999999964 444 32 2233344689988 56888
Q ss_pred HHHHHH
Q 044543 641 IVSAVL 646 (962)
Q Consensus 641 i~~~i~ 646 (962)
+...+.
T Consensus 199 l~~~l~ 204 (211)
T 2gmw_A 199 LPQAIK 204 (211)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877664
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=97.51 E-value=5e-05 Score=80.37 Aligned_cols=66 Identities=18% Similarity=0.153 Sum_probs=55.7
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhc-------ccccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGA-------SDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~a-------aDivl~~~~~~~i~~~i~ 646 (962)
.|...++.+.+. | ..|+++||+.||.+|++.|++||+|+++.+..++. ||++..+++-.++.++++
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~ 238 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCCcHHHHHHHhcccccceeecCCcchhHHHHHHH
Confidence 677777777653 2 35899999999999999999999999998888885 889998888888888775
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.49 E-value=9.7e-05 Score=76.44 Aligned_cols=123 Identities=12% Similarity=0.058 Sum_probs=82.0
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.+.++.|+ .|+++.++|+.....+...-+.+|+.... ..++.+.... ...-.|+
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 166 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYF--KKIILSEDLG-----------------VLKPRPE 166 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGC--SEEEEGGGTT-----------------CCTTSHH
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhc--eeEEEeccCC-----------------CCCCCHH
Confidence 46789999999999 99999999999988888888899875321 1111111000 0111122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCc-CChhhhhcCCeeEEccCchH--HHHhcccccccCCCchHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGV-NDAPALKKADIGIAVADATD--AARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~-ND~~aLk~AdVGIamg~gt~--~a~~aaDivl~~~~~~~i~~~i 645 (962)
--..+.+.+.-....|+++||+. ||..|.++|++++++.+... ..+..+|+++ +++..+..+.
T Consensus 167 ~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi--~sl~e~~~~~ 232 (240)
T 3qnm_A 167 IFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHI--HSLKELMNLL 232 (240)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEE--SSTHHHHHHT
T ss_pred HHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEE--CCHHHHHHHH
Confidence 22233333332345699999995 99999999999999953222 3455789998 6677776654
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00013 Score=76.35 Aligned_cols=122 Identities=13% Similarity=0.157 Sum_probs=78.3
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhh
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEH 581 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~q 581 (962)
+.|++.+.++.|++.|+++.++|+.....+..+-+.+|+. . .. .++.+.... ...-.|+-
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~-f~-~~~~~~~~~-----------------~~Kp~p~~ 170 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-S-FD-FALGEKSGI-----------------RRKPAPDM 170 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-T-CS-EEEEECTTS-----------------CCTTSSHH
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-c-ee-EEEecCCCC-----------------CCCCCHHH
Confidence 5689999999999999999999999888888888888874 2 11 111111100 00001111
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee---EEccCch-H-HHHhcccccccCCCchHHHHHH
Q 044543 582 KYEIVRKLQERKHICGMTGDGVNDAPALKKADIG---IAVADAT-D-AARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 582 K~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG---Iamg~gt-~-~a~~aaDivl~~~~~~~i~~~i 645 (962)
=..+.+.+.-....|+|+||+.||+.|.++|++. +++|.+. + .....+|+++ +++..+...+
T Consensus 171 ~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~--~~~~el~~~l 237 (240)
T 2hi0_A 171 TSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIV--DTAEKLEEAI 237 (240)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEE--CSHHHHHHHH
T ss_pred HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEE--CCHHHHHHHh
Confidence 1223333333345699999999999999999993 4444322 3 3334689888 5576666544
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.47 E-value=1.7e-05 Score=83.57 Aligned_cols=124 Identities=14% Similarity=0.102 Sum_probs=74.3
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHH-HHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCH
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG-RRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFP 579 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia-~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP 579 (962)
++.+++.+.++.|++.|+++.++|+.........- +..|+.... ..++.+.... .....-.|
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f--~~~~~~~~~~---------------~~~~Kp~~ 174 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLF--SHIVLGDDPE---------------VQHGKPDP 174 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTS--SCEECTTCTT---------------CCSCTTST
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhhe--eeEEecchhh---------------ccCCCCCh
Confidence 47899999999999999999999999866554422 223332110 0111111000 00000111
Q ss_pred hhHHHHHHHHhhCC--CEEEEEcCCcCChhhhhcCC---eeEEccCchHHHHhcccccccCCCchHHHH
Q 044543 580 EHKYEIVRKLQERK--HICGMTGDGVNDAPALKKAD---IGIAVADATDAARGASDIVLTEPGLSVIVS 643 (962)
Q Consensus 580 ~qK~~iV~~lq~~g--~~v~miGDG~ND~~aLk~Ad---VGIamg~gt~~a~~aaDivl~~~~~~~i~~ 643 (962)
+-=..+.+.+.-.. ..|+++||+.||+.|.++|+ |+|+++++.+..+..||+++ +++..+..
T Consensus 175 ~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~--~sl~el~~ 241 (250)
T 3l5k_A 175 DIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVL--NSLQDFQP 241 (250)
T ss_dssp HHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEEC--SCGGGCCG
T ss_pred HHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEee--cCHHHhhH
Confidence 11122222222222 67899999999999999999 56666766666778899998 45655543
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.47 E-value=9.6e-05 Score=76.09 Aligned_cols=123 Identities=8% Similarity=0.032 Sum_probs=78.1
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEE--ecC
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFA--GVF 578 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a--rvs 578 (962)
++.+++.+.++.++. ++.++|+........+.+++|+.... +..+..+.... .. .-.
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~-~~~~~~~~~~~-----------------~~~~kpk 145 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYF-APHIYSAKDLG-----------------ADRVKPK 145 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGT-TTCEEEHHHHC-----------------TTCCTTS
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhc-cceEEeccccc-----------------cCCCCcC
Confidence 356788888887764 99999999998888888888874211 01111110000 00 011
Q ss_pred HhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEccCchH-------HHHhc-ccccccCCCchHHHHHHH
Q 044543 579 PEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG-IAVADATD-------AARGA-SDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 579 P~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG-Iamg~gt~-------~a~~a-aDivl~~~~~~~i~~~i~ 646 (962)
|+--..+.+.+.-....|+++||+.||.+|++.|+++ |+++.+.+ ..++. ||+++ +++..+...+.
T Consensus 146 ~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~--~~~~el~~~l~ 220 (229)
T 2fdr_A 146 PDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVI--SRMQDLPAVIA 220 (229)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEE--SCGGGHHHHHH
T ss_pred HHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceee--cCHHHHHHHHH
Confidence 2222333444433345689999999999999999998 77764432 35555 99998 55777766553
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00013 Score=75.40 Aligned_cols=124 Identities=9% Similarity=0.037 Sum_probs=82.1
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.+.++.|++. +++.++|+.....+...-+.+|+.... ..++.+.... ...-.|+
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~kp~~~ 162 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFF--KDIFVSEDTG-----------------FQKPMKE 162 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGC--SEEEEGGGTT-----------------SCTTCHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhh--heEEEecccC-----------------CCCCChH
Confidence 4678999999999999 999999999998888888888875321 1111110000 0111122
Q ss_pred hHHHHHHHHh-hCCCEEEEEcCCc-CChhhhhcCCee-EEccCc--hHHHHhcccccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQ-ERKHICGMTGDGV-NDAPALKKADIG-IAVADA--TDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq-~~g~~v~miGDG~-ND~~aLk~AdVG-Iamg~g--t~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
--..+.+.+. -....|+++||+. ||..|.+.|+++ |.++.| .+..+..+|+++ +++..+...+.
T Consensus 163 ~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~--~~~~el~~~l~ 231 (238)
T 3ed5_A 163 YFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEI--RKLEELYHILN 231 (238)
T ss_dssp HHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEE--SSGGGHHHHHT
T ss_pred HHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEE--CCHHHHHHHHH
Confidence 2222333332 2224699999998 999999999995 444433 445566789998 66888877764
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00012 Score=78.72 Aligned_cols=114 Identities=15% Similarity=-0.010 Sum_probs=76.4
Q ss_pred CCccHHHHHHHHHhC-CCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 502 PRHDSAETIRRALNL-GVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 502 lr~~~~~~I~~l~~a-GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
+.+++.+.++.|++. |+++.++|+.....+....+.+|+.. . ..++.+..... ..-.|+
T Consensus 115 ~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~--f-~~i~~~~~~~~-----------------~kp~~~ 174 (275)
T 2qlt_A 115 EVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR--P-EYFITANDVKQ-----------------GKPHPE 174 (275)
T ss_dssp ECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC--C-SSEECGGGCSS-----------------CTTSSH
T ss_pred cCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc--c-CEEEEcccCCC-----------------CCCChH
Confidence 578999999999999 99999999999998888888888752 1 11222111000 001122
Q ss_pred hHHHHHHHHhh-------CCCEEEEEcCCcCChhhhhcCCeeEEc---cCchHHHH-hcccccccC
Q 044543 581 HKYEIVRKLQE-------RKHICGMTGDGVNDAPALKKADIGIAV---ADATDAAR-GASDIVLTE 635 (962)
Q Consensus 581 qK~~iV~~lq~-------~g~~v~miGDG~ND~~aLk~AdVGIam---g~gt~~a~-~aaDivl~~ 635 (962)
--..+.+.+.- ....|+++||+.||..|+++|++++++ +.+.+..+ ..||+++.+
T Consensus 175 ~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~ 240 (275)
T 2qlt_A 175 PYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKN 240 (275)
T ss_dssp HHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESS
T ss_pred HHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 22344444443 445699999999999999999977665 43333333 358988743
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.42 E-value=9.6e-05 Score=78.03 Aligned_cols=123 Identities=13% Similarity=0.126 Sum_probs=83.6
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.+.++.|+ |+++.++|+.....+..+.+.+|+.... ..++.+.... ...-.|+
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f--~~~~~~~~~~-----------------~~Kp~~~ 151 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF--DAVISVDAKR-----------------VFKPHPD 151 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGGT-----------------CCTTSHH
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhc--cEEEEccccC-----------------CCCCCHH
Confidence 57899999999999 9999999999999999999999974321 1111111000 1112233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCc---------------------------hHHHHhcccccc
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADA---------------------------TDAARGASDIVL 633 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~g---------------------------t~~a~~aaDivl 633 (962)
--..+.+.+.-....|+|+||+.||+.|.++|+++.++.+. .+..+..+|+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (253)
T 1qq5_A 152 SYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV 231 (253)
T ss_dssp HHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE
T ss_pred HHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeee
Confidence 33444455543445689999999999999999999888543 112234588888
Q ss_pred cCCCchHHHHHHH
Q 044543 634 TEPGLSVIVSAVL 646 (962)
Q Consensus 634 ~~~~~~~i~~~i~ 646 (962)
+++..+...+.
T Consensus 232 --~~~~el~~~l~ 242 (253)
T 1qq5_A 232 --PALGDLPRLVR 242 (253)
T ss_dssp --SSGGGHHHHHH
T ss_pred --CCHHHHHHHHH
Confidence 66878777663
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.41 E-value=9.6e-05 Score=74.91 Aligned_cols=120 Identities=10% Similarity=0.103 Sum_probs=80.8
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.|++.+ ++.|++. +++.++|+.....+..+.+.+|+.... ..++.+.... ...-.|+
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~~ 132 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYF--KGIFSAESVK-----------------EYKPSPK 132 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGGT-----------------CCTTCHH
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhC--cEEEehhhcC-----------------CCCCCHH
Confidence 46789999 9999999 999999999988888888999974321 1111111000 1111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEc-c---CchHHHHhcccccccCCCchHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAV-A---DATDAARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIam-g---~gt~~a~~aaDivl~~~~~~~i~~~i 645 (962)
--..+.+.+. ...++|+||+.||..|.++|+++..+ . ++.+.....+|+++ +++..+...+
T Consensus 133 ~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~el~~~l 197 (201)
T 2w43_A 133 VYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIV--NDFKELYEWI 197 (201)
T ss_dssp HHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEE--SSHHHHHHHH
T ss_pred HHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEE--CCHHHHHHHH
Confidence 3345555555 45688999999999999999998776 2 22222234688887 5577776655
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00018 Score=71.82 Aligned_cols=107 Identities=13% Similarity=0.014 Sum_probs=68.1
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhh
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEH 581 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~q 581 (962)
+.+++.+.++.|++.|+++.++|++.. .+....+.+|+.... ...+.+.... ...-.|+-
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f--~~~~~~~~~~-----------------~~kp~~~~ 142 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYF--TEVVTSSSGF-----------------KRKPNPES 142 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGE--EEEECGGGCC-----------------CCTTSCHH
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhhe--eeeeeccccC-----------------CCCCCHHH
Confidence 579999999999999999999998865 466777778874211 0011110000 00011222
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhccc
Q 044543 582 KYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASD 630 (962)
Q Consensus 582 K~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaD 630 (962)
-..+.+.+.-. .|+++||+.||.+|++.|++++++.+.....++..+
T Consensus 143 ~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~l~ 189 (190)
T 2fi1_A 143 MLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLD 189 (190)
T ss_dssp HHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHT
T ss_pred HHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEECCCCChhhccC
Confidence 22333333322 689999999999999999999888644444554444
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00011 Score=76.66 Aligned_cols=123 Identities=11% Similarity=0.066 Sum_probs=82.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.+.++.|++. +++.++|+........+.+.+|+.-+ .++.+.... ...-.|+
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f~----~~~~~~~~~-----------------~~kp~~~ 173 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPWD----VIIGSDINR-----------------KYKPDPQ 173 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCCS----CCCCHHHHT-----------------CCTTSHH
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCee----EEEEcCcCC-----------------CCCCCHH
Confidence 5678999999999997 99999999999999999999998411 111110000 0001122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchH---------H-HHhcccccccCCCchHHHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATD---------A-ARGASDIVLTEPGLSVIVSAVLT 647 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~---------~-a~~aaDivl~~~~~~~i~~~i~~ 647 (962)
-=..+.+.+.-....|+++||+.||..|.++|++++++.+... . .+..+|+++ +++..+...+..
T Consensus 174 ~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~--~~~~el~~~l~~ 248 (254)
T 3umg_A 174 AYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISA--TDITDLAAQLRA 248 (254)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEE--SSHHHHHHHHHH
T ss_pred HHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEE--CCHHHHHHHhcC
Confidence 1112222222233568999999999999999999999953111 1 245789998 678888887753
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00022 Score=71.95 Aligned_cols=96 Identities=13% Similarity=0.057 Sum_probs=65.8
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCC-HHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCH
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQ-LAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFP 579 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~-~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP 579 (962)
++.|++.+++++|++.|+++.++||.. ...+..+.+.+|+..... ... +++.-.|
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~-~~~-----------------------~~~~~k~ 123 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFV-HRE-----------------------IYPGSKI 123 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEE-EEE-----------------------ESSSCHH
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcc-eeE-----------------------EEeCchH
Confidence 578999999999999999999999998 688999999999853210 000 0000012
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEccC
Q 044543 580 EHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG-IAVAD 620 (962)
Q Consensus 580 ~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG-Iamg~ 620 (962)
+.-..+.+.+.-....|+|+||+.||+.+.++|++. |.+..
T Consensus 124 ~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i~v~~ 165 (187)
T 2wm8_A 124 THFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQN 165 (187)
T ss_dssp HHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSS
T ss_pred HHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEEEECC
Confidence 212223333332334689999999999999999984 44443
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.38 E-value=1.5e-05 Score=81.44 Aligned_cols=119 Identities=10% Similarity=0.033 Sum_probs=77.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.+.++.|++. +++.++|+.....+..+.+.+|+.... ..++.+... ....-.|+
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~KP~~~ 142 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRM--AVTISADDT-----------------PKRKPDPL 142 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGE--EEEECGGGS-----------------SCCTTSSH
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhc--cEEEecCcC-----------------CCCCCCcH
Confidence 4689999999999999 999999999988888888888764210 011111000 00011122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEcc---C-chHHHHhcccccccCCCchHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVA---D-ATDAARGASDIVLTEPGLSVIV 642 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg---~-gt~~a~~aaDivl~~~~~~~i~ 642 (962)
--..+.+.+.-....|+++||+.||.+|.+.|++++++. . ..+..++ +|+++ +++..+.
T Consensus 143 ~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~--~~~~el~ 205 (209)
T 2hdo_A 143 PLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRF--QKPLDIL 205 (209)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEE--SSGGGGG
T ss_pred HHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEe--CCHHHHH
Confidence 223444444433456899999999999999999999873 2 2333444 89888 3455544
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.38 E-value=8.4e-05 Score=77.98 Aligned_cols=122 Identities=12% Similarity=0.068 Sum_probs=83.2
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.+.++.|++. +++.++|+........+.+.+|+.- . .++...... ...-.|+
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f---~-~~~~~~~~~-----------------~~kp~~~ 177 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPW---D-MLLCADLFG-----------------HYKPDPQ 177 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCC---S-EECCHHHHT-----------------CCTTSHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCc---c-eEEeecccc-----------------cCCCCHH
Confidence 4578999999999985 9999999999988889999999741 1 111110000 0111222
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccC-----ch---HH--HHhcccccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVAD-----AT---DA--ARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~-----gt---~~--a~~aaDivl~~~~~~~i~~~i~ 646 (962)
--..+.+.+.-....|+++||+.||+.|.+.|+++++|.+ |. +. .+..+|+++ +++..+...+.
T Consensus 178 ~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~--~~l~el~~~l~ 251 (254)
T 3umc_A 178 VYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIA--SDLLDLHRQLA 251 (254)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEE--SSHHHHHHHHH
T ss_pred HHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEE--CCHHHHHHHhc
Confidence 2233444443334569999999999999999999999964 22 11 255789998 67888877664
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00013 Score=75.47 Aligned_cols=122 Identities=14% Similarity=0.106 Sum_probs=80.9
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.+.++.|++ |+++.++|+..........+.++- .. ..++.+... ....-.|+
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~---~f-d~i~~~~~~-----------------~~~KP~~~ 156 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGV---EF-DHIITAQDV-----------------GSYKPNPN 156 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCS---CC-SEEEEHHHH-----------------TSCTTSHH
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCC---cc-CEEEEcccc-----------------CCCCCCHH
Confidence 578999999999999 899999999888777666555431 11 111111000 01223444
Q ss_pred hHHHHHHHHhh---CCCEEEEEcCCc-CChhhhhcCCeeEEccCch-----------HHHHhcccccccCCCchHHHHHH
Q 044543 581 HKYEIVRKLQE---RKHICGMTGDGV-NDAPALKKADIGIAVADAT-----------DAARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 581 qK~~iV~~lq~---~g~~v~miGDG~-ND~~aLk~AdVGIamg~gt-----------~~a~~aaDivl~~~~~~~i~~~i 645 (962)
-....++.+++ ....|+|+||+. ||+.|.++|++++++.+.. +..+..+|+++ +++..+...+
T Consensus 157 ~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~--~~~~el~~~l 234 (240)
T 3smv_A 157 NFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRF--NSMGEMAEAH 234 (240)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEE--SSHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEe--CCHHHHHHHH
Confidence 44455433443 345689999996 9999999999999994311 22346789998 6688877766
Q ss_pred H
Q 044543 646 L 646 (962)
Q Consensus 646 ~ 646 (962)
.
T Consensus 235 ~ 235 (240)
T 3smv_A 235 K 235 (240)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00013 Score=77.82 Aligned_cols=66 Identities=26% Similarity=0.290 Sum_probs=54.3
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~----g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
.|...++.+.++ ...|+++||+.||.+|++.|++|++|+++.+..+..||+++.+++-.++..+++
T Consensus 187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~ 256 (261)
T 2rbk_A 187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMK 256 (261)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccHHHHhhCCEEeccCchhhHHHHHH
Confidence 677777666542 246899999999999999999999999888888999999997766666887775
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00015 Score=77.09 Aligned_cols=123 Identities=15% Similarity=0.195 Sum_probs=83.2
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhh
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEH 581 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~q 581 (962)
+.|++.++++.|++.|+++.++|+.... ...+-+.+|+.... ..++.+... ....-.|+-
T Consensus 107 ~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f--~~~~~~~~~-----------------~~~Kp~~~~ 166 (263)
T 3k1z_A 107 VLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHF--DFVLTSEAA-----------------GWPKPDPRI 166 (263)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGC--SCEEEHHHH-----------------SSCTTSHHH
T ss_pred ECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhh--hEEEeeccc-----------------CCCCCCHHH
Confidence 5799999999999999999999987664 57778888874321 011111000 011223444
Q ss_pred HHHHHHHHhhCCCEEEEEcCCc-CChhhhhcCCeeEEcc-Cc--hH---HHHhcccccccCCCchHHHHHHH
Q 044543 582 KYEIVRKLQERKHICGMTGDGV-NDAPALKKADIGIAVA-DA--TD---AARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 582 K~~iV~~lq~~g~~v~miGDG~-ND~~aLk~AdVGIamg-~g--t~---~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
-..+.+.+.-....|+|+||+. ||+.|.++|++++++. .+ .. .....+|+++ +++..+...+.
T Consensus 167 ~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~--~~l~el~~~l~ 236 (263)
T 3k1z_A 167 FQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHIL--PSLAHLLPALD 236 (263)
T ss_dssp HHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEE--SSGGGHHHHHH
T ss_pred HHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEe--CCHHHHHHHHH
Confidence 4455555554456699999997 9999999999999984 22 11 1233689998 66888887764
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00023 Score=71.96 Aligned_cols=137 Identities=15% Similarity=0.100 Sum_probs=89.5
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCH---HHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEe
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQL---AIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAG 576 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~---~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar 576 (962)
-++.+|+.++++.|++.|+++.++|+-.. ..+..+-+.+|+.... ..++....... ...+..
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~f--d~i~~~~~~~~-------------~~~~~K 97 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYF--DFIYASNSELQ-------------PGKMEK 97 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGE--EEEEECCTTSS-------------TTCCCT
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhhe--EEEEEcccccc-------------ccCCCC
Confidence 35889999999999999999999998765 8888899999985311 01111100000 000112
Q ss_pred cCHhhHHHHHHHHhhCCCEEEEEcCC-cCChhhhhcCCeeEE-ccCchH-----HH-HhcccccccCCCchHHHHHHHHH
Q 044543 577 VFPEHKYEIVRKLQERKHICGMTGDG-VNDAPALKKADIGIA-VADATD-----AA-RGASDIVLTEPGLSVIVSAVLTS 648 (962)
Q Consensus 577 vsP~qK~~iV~~lq~~g~~v~miGDG-~ND~~aLk~AdVGIa-mg~gt~-----~a-~~aaDivl~~~~~~~i~~~i~~g 648 (962)
-.|+--..+.+.+.-....|+||||. .+|+.+-++|++... +..+.. .. ...+|+++...++..+..++...
T Consensus 98 P~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l~ 177 (189)
T 3ib6_A 98 PDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLL 177 (189)
T ss_dssp TSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHHH
T ss_pred cCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHHHH
Confidence 23444445555555445679999999 799999999999543 433221 11 12678888655899999888765
Q ss_pred HHH
Q 044543 649 RAI 651 (962)
Q Consensus 649 R~~ 651 (962)
+.-
T Consensus 178 ~~~ 180 (189)
T 3ib6_A 178 KKI 180 (189)
T ss_dssp HHH
T ss_pred HHh
Confidence 543
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00022 Score=73.01 Aligned_cols=115 Identities=11% Similarity=0.087 Sum_probs=77.3
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.||+.+.++.|++ |+++.++|+.....+..+-+++|+.... ..++ .+.-.+.
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f--~~i~-----------------------~~~~~~K 137 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFF--DGIY-----------------------GSSPEAP 137 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGC--SEEE-----------------------EECSSCC
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhe--eeee-----------------------cCCCCCC
Confidence 467999999999999 9999999999888888888889975321 1111 1110111
Q ss_pred hHHHHHHH-HhhC---CCEEEEEcCCcCChhhhhcCCe---eEEccCc-hHHHH-hcccccccCCCchHHHH
Q 044543 581 HKYEIVRK-LQER---KHICGMTGDGVNDAPALKKADI---GIAVADA-TDAAR-GASDIVLTEPGLSVIVS 643 (962)
Q Consensus 581 qK~~iV~~-lq~~---g~~v~miGDG~ND~~aLk~AdV---GIamg~g-t~~a~-~aaDivl~~~~~~~i~~ 643 (962)
-|.++.+. +++. ...|+|+||+.||+.|.++|++ |+++|.+ .+..+ ..+|+++ +++..+..
T Consensus 138 p~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~--~~~~el~~ 207 (210)
T 2ah5_A 138 HKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIA--HKPLEVLA 207 (210)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEE--SSTTHHHH
T ss_pred CChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEE--CCHHHHHH
Confidence 23333332 3332 3459999999999999999998 6666644 33333 3589988 44655544
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00075 Score=70.83 Aligned_cols=117 Identities=15% Similarity=0.058 Sum_probs=80.0
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEec--C
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGV--F 578 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arv--s 578 (962)
++.+++.+.++.|+ .|+++.++|+.....+....+.+|+.... . .+++.- .
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f-~-------------------------~i~~~~kp~ 164 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLF-P-------------------------RIEVVSEKD 164 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTC-C-------------------------CEEEESCCS
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhC-c-------------------------eeeeeCCCC
Confidence 45799999999999 99999999999988888888888874321 0 112211 2
Q ss_pred HhhHHHHHHHHhhCCCEEEEEcCCc-CChhhhhcCCeeEEc-cCchH--------HHHhcccc-cccCCCchHHHHHHH
Q 044543 579 PEHKYEIVRKLQERKHICGMTGDGV-NDAPALKKADIGIAV-ADATD--------AARGASDI-VLTEPGLSVIVSAVL 646 (962)
Q Consensus 579 P~qK~~iV~~lq~~g~~v~miGDG~-ND~~aLk~AdVGIam-g~gt~--------~a~~aaDi-vl~~~~~~~i~~~i~ 646 (962)
|+--..+.+.+.-....|+++||+. ||..|.+.|++++++ ..|.. .....+|+ ++ +++..+...+.
T Consensus 165 ~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~~l~ 241 (251)
T 2pke_A 165 PQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREV--PDPSGWPAAVR 241 (251)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEEC--SSGGGHHHHHH
T ss_pred HHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeee--CCHHHHHHHHH
Confidence 3333344444443445699999999 999999999999776 33221 11235787 77 56777776664
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00011 Score=77.90 Aligned_cols=56 Identities=21% Similarity=0.183 Sum_probs=45.8
Q ss_pred hhHHHHHHHHhhC-----CCEEEEEcCCcCChhhhhcCCeeEEccCch-HHHHhcccccccC
Q 044543 580 EHKYEIVRKLQER-----KHICGMTGDGVNDAPALKKADIGIAVADAT-DAARGASDIVLTE 635 (962)
Q Consensus 580 ~qK~~iV~~lq~~-----g~~v~miGDG~ND~~aLk~AdVGIamg~gt-~~a~~aaDivl~~ 635 (962)
..|..-++.+.+. ...|+++||+.||.+||+.|++||+||++. +..++.||+++.+
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEecc
Confidence 3587777766543 357999999999999999999999999887 6677789988744
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.00081 Score=67.76 Aligned_cols=99 Identities=13% Similarity=0.092 Sum_probs=68.9
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.+.++.|++.| ++.++|+........+.+.+|+.... ..++.+... ....-.|+
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f--~~~~~~~~~-----------------~~~Kp~~~ 145 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFL--LAFFTSSAL-----------------GVMKPNPA 145 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTC--SCEEEHHHH-----------------SCCTTCHH
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhc--ceEEeeccc-----------------CCCCCCHH
Confidence 36799999999999999 99999999999888888899874321 111111000 01112233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEcc
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVA 619 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg 619 (962)
--..+.+.+.-....|+|+||+.||..|.+.|++...+-
T Consensus 146 ~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~ 184 (200)
T 3cnh_A 146 MYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQC 184 (200)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEE
Confidence 333444555444456899999999999999999987764
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.77 E-value=0.00025 Score=72.10 Aligned_cols=101 Identities=6% Similarity=-0.015 Sum_probs=66.4
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHH------hCCCCCCCCcccccccchhccCCcchHHHHhhhcceE
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR------LGMGTNMYPSSALLGQIKDANISALPVDELIEKADGF 574 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~------~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ 574 (962)
++.+++.+.++.|++ |+++.++|+.....+..+.+. .|+.... ..++.+... ..
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f--~~~~~~~~~-----------------~~ 148 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFF--DKVYASCQM-----------------GK 148 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGS--SEEEEHHHH-----------------TC
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHc--CeEEeeccc-----------------CC
Confidence 467899999999999 999999999888777766665 4543110 001100000 01
Q ss_pred EecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCc
Q 044543 575 AGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADA 621 (962)
Q Consensus 575 arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~g 621 (962)
..-.|+--..+.+.+.-....|+++||+.||..|.++|+++..+.++
T Consensus 149 ~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~ 195 (211)
T 2i6x_A 149 YKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDN 195 (211)
T ss_dssp CTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCT
T ss_pred CCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECC
Confidence 11223333344455543445699999999999999999999988643
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.77 E-value=0.00077 Score=71.87 Aligned_cols=56 Identities=20% Similarity=0.304 Sum_probs=47.9
Q ss_pred hHHHHHHHHhh--CCCEEEEEcC----CcCChhhhhcCC-eeEEccCchHHHHhcccccccCCC
Q 044543 581 HKYEIVRKLQE--RKHICGMTGD----GVNDAPALKKAD-IGIAVADATDAARGASDIVLTEPG 637 (962)
Q Consensus 581 qK~~iV~~lq~--~g~~v~miGD----G~ND~~aLk~Ad-VGIamg~gt~~a~~aaDivl~~~~ 637 (962)
.|..-++.| . ....|+++|| |.||.+||+.|+ +|++|+++.+..++.||+++.+++
T Consensus 197 sKg~al~~l-~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~~k~~a~~v~~~~~ 259 (262)
T 2fue_A 197 DKRYCLDSL-DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFFPETA 259 (262)
T ss_dssp STTHHHHHH-TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHCTTC-
T ss_pred CHHHHHHHH-HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHHHHHhhheeCCCCc
Confidence 588888888 2 2457999999 999999999999 699999999999999999986543
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=96.77 E-value=0.012 Score=58.15 Aligned_cols=131 Identities=10% Similarity=0.065 Sum_probs=80.9
Q ss_pred ccCCceEEEEEeeeeccc--CCChHHHHHHHHHhccccCCChHHHHHHHhhcChhhh--hcCceEeeecCCCCCCceEEE
Q 044543 347 LTLNKLTVDKNLVEVFVK--DMDKDTVILYGARASRVENQDAIDACIVGMLGDAKEA--RAGITELHFLPFNPVEKRTAI 422 (962)
Q Consensus 347 LT~n~m~v~~~~i~~~~~--~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~--~~~~~~l~~~pF~s~~kr~sv 422 (962)
||+|+|+|.+... +.. +.+.++++.+++..+..++ ||+..|++.++...... ....+..+.+|- +-+..
T Consensus 1 LT~G~p~V~~v~~--~~~~~~~~~~~lL~laaslE~~Se-HPlA~AIv~~a~~~~~~~~~~~~~~f~~i~G----~Gv~a 73 (165)
T 2arf_A 1 AGHMVPRVMRVLL--LGDVATLPLRKVLAVVGTAEASSE-HPLGVAVTKYCKEELGTETLGYCTDFQAVPG----CGIGC 73 (165)
T ss_dssp CCCCCCCEEEEEE--CCCTTTSCHHHHHHHHHHHHTTSC-STTHHHHHHHHHHHHTCCCCCCEEEEEEETT----TEEEE
T ss_pred CCCceeEEEEEEe--eCCcCCCCHHHHHHHHHHHHccCC-ChHHHHHHHHHHHhcCCCCCCCcCceEEecC----ccEEE
Confidence 8999999988653 221 2467888888888776655 99999999987432100 011222333332 12222
Q ss_pred EEEcC------------------------------CCCEEEEEeCcHHHHHHHhccchHHHHHHHHHHHHHHhcCCeEEE
Q 044543 423 TYIDS------------------------------DGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLA 472 (962)
Q Consensus 423 ~~~~~------------------------------~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~ 472 (962)
.+... ..+.+.+.-|+++.+-+..- .+.+.....+..+..+|..++.
T Consensus 74 ~v~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi---~~~~~~~~~~~~~~~~G~T~v~ 150 (165)
T 2arf_A 74 KVSNVEGILAHSERPLSAPASHLNEAGSLPAEKDAVPQTFSVLIGNREWLRRNGL---TISSDVSDAMTDHEMKGQTAIL 150 (165)
T ss_dssp EEECHHHHHSCCCCCCCCCCCCSSSSCCCCCCCCCCCCEEEEEEECHHHHHHHHC---SSCHHHHHHHHHHHTTTSEEEE
T ss_pred EEcCcccccccccccccccccccccccccccccccCCCceEEEEcCHHHHHhcCC---CCCHHHHHHHHHHHhCCCeEEE
Confidence 22211 12235778899998755321 1122334455677788999999
Q ss_pred EEeecCCCCCCCCCCCCceEEEEeecCC
Q 044543 473 VAEQSVPEKTKESPGGPWQFVGLLPLFD 500 (962)
Q Consensus 473 ~A~~~~~~~~~~~~e~~l~llG~i~i~D 500 (962)
+|... +++|++++.|
T Consensus 151 va~dg-------------~~~g~i~l~D 165 (165)
T 2arf_A 151 VAIDG-------------VLCGMIAIAD 165 (165)
T ss_dssp EEETT-------------EEEEEEEECC
T ss_pred EEECC-------------EEEEEEEEEC
Confidence 99865 8999999988
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=96.72 E-value=0.00071 Score=69.88 Aligned_cols=134 Identities=17% Similarity=0.044 Sum_probs=75.5
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCH---------------HHHHHHHHHhCCCCCCCCcccccccchhccCCcchH
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQL---------------AIAKETGRRLGMGTNMYPSSALLGQIKDANISALPV 564 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~---------------~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~ 564 (962)
.++.+++.+++++|++.|+++.++|+... ..+..+.+++|+.-+. ........+....
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~---~~~~~~~~~g~~~---- 127 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDM---VLACAYHEAGVGP---- 127 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSE---EEEECCCTTCCST----
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCceee---EEEeecCCCCcee----
Confidence 46789999999999999999999999887 6777788888873110 0000000000000
Q ss_pred HHHhhhcce-EEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeE--EccCc--h-HHHHhcccccccCCCc
Q 044543 565 DELIEKADG-FAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGI--AVADA--T-DAARGASDIVLTEPGL 638 (962)
Q Consensus 565 ~~~~~~~~v-~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGI--amg~g--t-~~a~~aaDivl~~~~~ 638 (962)
+. ...+ +..-.|+-=..+.+.+.-....++||||+.||+.+.++|++.. .+..| . +.....+|+++ +++
T Consensus 128 -~~--~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i--~~l 202 (218)
T 2o2x_A 128 -LA--IPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDS--SEL 202 (218)
T ss_dssp -TC--CSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSH--HHH
T ss_pred -ec--ccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEec--ccH
Confidence 00 0000 0000111111223333223346899999999999999999854 44322 1 11223567776 446
Q ss_pred hHHHHHH
Q 044543 639 SVIVSAV 645 (962)
Q Consensus 639 ~~i~~~i 645 (962)
..+...+
T Consensus 203 ~el~~~l 209 (218)
T 2o2x_A 203 GDLLAAI 209 (218)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665554
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.69 E-value=0.00059 Score=64.18 Aligned_cols=104 Identities=12% Similarity=0.081 Sum_probs=67.3
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.|++.+++++|++.|+++.++|+.....+..+.+.+|+.... ..++..... ....-.|+
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~Kp~~~ 78 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVV--DKVLLSGEL-----------------GVEKPEEA 78 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSS--SEEEEHHHH-----------------SCCTTSHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhc--cEEEEeccC-----------------CCCCCCHH
Confidence 46789999999999999999999999888877877888764321 111110000 01112233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEccCchH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG-IAVADATD 623 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG-Iamg~gt~ 623 (962)
--..+.+.+.-....++|+||+.+|..+.++|++- |.+..+.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~i~~~~~~~ 122 (137)
T 2pr7_A 79 AFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQQFDR 122 (137)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEEEECSCHHH
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEEEEeCChHH
Confidence 33334444433334689999999999999999873 33344443
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0038 Score=63.63 Aligned_cols=125 Identities=18% Similarity=0.148 Sum_probs=79.2
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.|++.++++.|++.|+++.++|+.....+...-+.+|+.... . .++...... ...-.|+
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~f-d-~~~~~~~~~-----------------~~KP~p~ 144 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYF-D-VMVFGDQVK-----------------NGKPDPE 144 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC-S-EEECGGGSS-----------------SCTTSTH
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccc-c-ccccccccC-----------------CCcccHH
Confidence 35789999999999999999999999999999999999985321 1 111111000 1111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-E-Ec--c-CchHHHHhcccccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG-I-AV--A-DATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG-I-am--g-~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
-=..+.+.+.-....|+||||..+|+.+-++|++. | ++ | +..+..+++.+.++.+ ...+++.+.
T Consensus 145 ~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~~--~~eli~~l~ 213 (216)
T 3kbb_A 145 IYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALVK--PEEILNVLK 213 (216)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEEC--GGGHHHHHH
T ss_pred HHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEECC--HHHHHHHHH
Confidence 32334444444445699999999999999999984 3 33 3 3334444444444433 345555543
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0024 Score=67.88 Aligned_cols=123 Identities=11% Similarity=0.110 Sum_probs=81.1
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.|++.++++.|++ |+++.++|+.....+..+.+.+|+.... ..++.+.... ...-.|+
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~-----------------~~KP~p~ 180 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYF--DAIVIGGEQK-----------------EEKPAPS 180 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGC--SEEEEGGGSS-----------------SCTTCHH
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhh--heEEecCCCC-----------------CCCCCHH
Confidence 477999999999998 6999999999999888888999985321 1111111100 1111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcC-CcCChhhhhcCCe--eEEccCchH---HHHhcccccccCCCchHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGD-GVNDAPALKKADI--GIAVADATD---AARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGD-G~ND~~aLk~AdV--GIamg~gt~---~a~~aaDivl~~~~~~~i~~~i 645 (962)
--..+.+.+.-....|+|+|| ..||+.+-++|++ .|.+..+.. .....+|+++ +++..+...+
T Consensus 181 ~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i--~~~~el~~~l 249 (260)
T 2gfh_A 181 IFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMV--SSVLELPALL 249 (260)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEE--SSGGGHHHHH
T ss_pred HHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEE--CCHHHHHHHH
Confidence 333444444434456999999 5999999999999 677753211 1223578887 5577776655
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0047 Score=62.77 Aligned_cols=120 Identities=10% Similarity=0.019 Sum_probs=73.7
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.|++.++++.|++.|+++.++||.....+..+.. . +...++.+.... ...-.|+
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~----~~d~v~~~~~~~-----------------~~KP~p~ 91 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---P----VNDWMIAAPRPT-----------------AGWPQPD 91 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---T----TTTTCEECCCCS-----------------SCTTSTH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---c----cCCEEEECCcCC-----------------CCCCChH
Confidence 567999999999999999999999998877744433 1 011111111000 0111222
Q ss_pred hHHHHHHHHhhC-CCEEEEEcCCcCChhhhhcCCe-eEEccCch---------------------------HHHHhcccc
Q 044543 581 HKYEIVRKLQER-KHICGMTGDGVNDAPALKKADI-GIAVADAT---------------------------DAARGASDI 631 (962)
Q Consensus 581 qK~~iV~~lq~~-g~~v~miGDG~ND~~aLk~AdV-GIamg~gt---------------------------~~a~~aaDi 631 (962)
-=....+.+.-. ...|+||||..+|+.+-++|++ .|++..|. +.....+|+
T Consensus 92 ~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~d~ 171 (196)
T 2oda_A 92 ACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGVHS 171 (196)
T ss_dssp HHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcCCCE
Confidence 222233333322 2458999999999999999997 56664221 011235888
Q ss_pred cccCCCchHHHHHHH
Q 044543 632 VLTEPGLSVIVSAVL 646 (962)
Q Consensus 632 vl~~~~~~~i~~~i~ 646 (962)
++ +++..+...+.
T Consensus 172 vi--~~~~eL~~~l~ 184 (196)
T 2oda_A 172 VI--DHLGELESCLA 184 (196)
T ss_dssp EE--SSGGGHHHHHH
T ss_pred Ee--CCHHHHHHHHH
Confidence 88 66888877663
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0011 Score=69.80 Aligned_cols=52 Identities=21% Similarity=0.257 Sum_probs=42.4
Q ss_pred hHHHHHHHH-hhCCCEEEEEcC----CcCChhhhhcCCe-eEEccCchHHHHhccccc
Q 044543 581 HKYEIVRKL-QERKHICGMTGD----GVNDAPALKKADI-GIAVADATDAARGASDIV 632 (962)
Q Consensus 581 qK~~iV~~l-q~~g~~v~miGD----G~ND~~aLk~AdV-GIamg~gt~~a~~aaDiv 632 (962)
.|..-++.| .-....|+++|| |.||.+||+.|+. |++|+++.+..|+.||+|
T Consensus 188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~vk~~A~~v 245 (246)
T 2amy_A 188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICELLF 245 (246)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHHHHHHC
T ss_pred chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHHHHHHHhhc
Confidence 577777776 112457999999 9999999999987 999999999999999987
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=96.44 E-value=0.0025 Score=71.85 Aligned_cols=137 Identities=12% Similarity=0.079 Sum_probs=81.6
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.||+.++++.|+++|+++.++|+-....+..+-+.+|+........++.+..... ..+......-...-.|+
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~------~~~~~~~~kp~~KP~P~ 288 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLE------AENMYPQARPLGKPNPF 288 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHH------HHHHSTTSCCCCTTSTH
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEecccccc------cccccccccCCCCCCHH
Confidence 678999999999999999999999999999999889999854211012222211100 00000000000111111
Q ss_pred hHHHHHHHHh--------------hCCCEEEEEcCCcCChhhhhcCCee-EEccCch-------HHHHhcccccccCCCc
Q 044543 581 HKYEIVRKLQ--------------ERKHICGMTGDGVNDAPALKKADIG-IAVADAT-------DAARGASDIVLTEPGL 638 (962)
Q Consensus 581 qK~~iV~~lq--------------~~g~~v~miGDG~ND~~aLk~AdVG-Iamg~gt-------~~a~~aaDivl~~~~~ 638 (962)
-=....+.+. -....|+|+||+.+|+.|-++|++. |++..|. +.....||+++ +++
T Consensus 289 ~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi--~sl 366 (384)
T 1qyi_A 289 SYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI--NHL 366 (384)
T ss_dssp HHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEE--SSG
T ss_pred HHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEE--CCH
Confidence 1111112111 1235689999999999999999985 5554321 22234689998 568
Q ss_pred hHHHHHH
Q 044543 639 SVIVSAV 645 (962)
Q Consensus 639 ~~i~~~i 645 (962)
..+...+
T Consensus 367 ~eL~~~l 373 (384)
T 1qyi_A 367 GELRGVL 373 (384)
T ss_dssp GGHHHHH
T ss_pred HHHHHHH
Confidence 7777665
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=96.29 E-value=0.00027 Score=71.53 Aligned_cols=93 Identities=5% Similarity=-0.013 Sum_probs=60.0
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHH-hCCCCCCCCcccccccchhccCCcchHHHHhhhcceE-----
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR-LGMGTNMYPSSALLGQIKDANISALPVDELIEKADGF----- 574 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~-~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~----- 574 (962)
++.|++.+.++.|++.|+++.++|+........+.+. +|+ ...+. .++
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l------------------------~~~f~--~~~~~~~~ 144 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEI------------------------RDAAD--HIYLSQDL 144 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHH------------------------HHHCS--EEEEHHHH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccCh------------------------hhhee--eEEEeccc
Confidence 4679999999999999999999998654332221111 121 11110 011
Q ss_pred --EecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEcc
Q 044543 575 --AGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVA 619 (962)
Q Consensus 575 --arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg 619 (962)
..-.|+--..+.+.+.-....++++||+.||..|.++|++...+.
T Consensus 145 ~~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~ 191 (206)
T 2b0c_A 145 GMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILV 191 (206)
T ss_dssp TCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEC
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEe
Confidence 111233344455555444556899999999999999999987775
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.24 E-value=0.0025 Score=65.33 Aligned_cols=118 Identities=20% Similarity=0.216 Sum_probs=73.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.++++.|++. +++.++|+.... -+.+|+.... ..++... .. ....-.|+
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f--~~~~~~~------------~~-----~~~kp~~~ 159 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYF--AFALCAE------------DL-----GIGKPDPA 159 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGC--SEEEEHH------------HH-----TCCTTSHH
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHe--eeeEEcc------------cc-----CCCCcCHH
Confidence 4678999999999998 999999987654 2334442110 0000000 00 01111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCc-CChhhhhcCCeeEEc---c-CchHHHHhcccccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGV-NDAPALKKADIGIAV---A-DATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~-ND~~aLk~AdVGIam---g-~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
--..+.+.+.-....|+|+||+. ||+.|.++|+++.++ + ...+. ...+|+++ +++..+...+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~--~~l~el~~~l~ 227 (230)
T 3vay_A 160 PFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEI--HNLSQLPEVLA 227 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEE--SSGGGHHHHHH
T ss_pred HHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeE--CCHHHHHHHHH
Confidence 33344444443445689999998 999999999998877 2 22222 55789998 66888877664
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=95.86 E-value=0.0046 Score=65.58 Aligned_cols=43 Identities=19% Similarity=0.308 Sum_probs=35.3
Q ss_pred CCCCCccHHHHHHHHHhCCCcEEEEcC---CCHHHHHHHHHHhCCC
Q 044543 499 FDPPRHDSAETIRRALNLGVNVKMITG---DQLAIAKETGRRLGMG 541 (962)
Q Consensus 499 ~D~lr~~~~~~I~~l~~aGI~v~miTG---D~~~tA~~ia~~~Gi~ 541 (962)
.+.+-+++.++|++|+++|++++++|| ..........+.+|+.
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~ 67 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE 67 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCC
Confidence 445567899999999999999999999 5666666667778875
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=95.85 E-value=0.014 Score=61.64 Aligned_cols=41 Identities=12% Similarity=0.119 Sum_probs=33.9
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcC---CCHHHHHHHHHHhCCC
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITG---DQLAIAKETGRRLGMG 541 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTG---D~~~tA~~ia~~~Gi~ 541 (962)
.+-+++.++|++|+++|++++++|| ..........+++|+.
T Consensus 22 ~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~ 65 (266)
T 3pdw_A 22 EKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIP 65 (266)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCC
T ss_pred EeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 3446899999999999999999988 6666677777788875
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=95.71 E-value=0.0097 Score=63.04 Aligned_cols=84 Identities=14% Similarity=0.063 Sum_probs=63.1
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCH----HHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEE
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQL----AIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFA 575 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~----~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a 575 (962)
.++.|++.+.++.|++.|+++.++||... +.+..--+++||..-... .++-
T Consensus 100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~-------------------------~Lil 154 (260)
T 3pct_A 100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDK-------------------------TLLL 154 (260)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTT-------------------------TEEE
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccc-------------------------eeEe
Confidence 45789999999999999999999999864 467777788998531100 1232
Q ss_pred ecCHhhHHHHHHHHhhC-CCEEEEEcCCcCChhh
Q 044543 576 GVFPEHKYEIVRKLQER-KHICGMTGDGVNDAPA 608 (962)
Q Consensus 576 rvsP~qK~~iV~~lq~~-g~~v~miGDG~ND~~a 608 (962)
|-....|....+.+++. -.+|+++||-.+|.++
T Consensus 155 r~~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 155 KKDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp ESSCSSSHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred cCCCCChHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 32235688888888874 4578999999999987
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=95.70 E-value=0.0027 Score=65.54 Aligned_cols=101 Identities=10% Similarity=-0.023 Sum_probs=66.3
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHH------hCCCCCCCCcccccccchhccCCcchHHHHhhhcceE
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR------LGMGTNMYPSSALLGQIKDANISALPVDELIEKADGF 574 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~------~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ 574 (962)
++.|++.++++.|++. +++.++|+.....+..+.+. .|+.... ..++... + ...
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~f--d~i~~~~------------~-----~~~ 171 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYF--EKTYLSY------------E-----MKM 171 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHC--SEEEEHH------------H-----HTC
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhC--CEEEeec------------c-----cCC
Confidence 3669999999999999 99999999998887766643 3331100 0000000 0 001
Q ss_pred EecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCc
Q 044543 575 AGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADA 621 (962)
Q Consensus 575 arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~g 621 (962)
..-.|+-=..+.+.+.-....|+|+||+.||+.|.++|+++..+.++
T Consensus 172 ~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~ 218 (229)
T 4dcc_A 172 AKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKA 218 (229)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCT
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECC
Confidence 12233444455555554456799999999999999999999888643
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=95.42 E-value=0.012 Score=61.87 Aligned_cols=116 Identities=10% Similarity=0.090 Sum_probs=75.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.|++.+.++.|++.|+++.+.|+-. .+..+-+.+|+.... ..++.+.... ...-.|+
T Consensus 116 ~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~F--d~i~~~~~~~-----------------~~KP~p~ 174 (250)
T 4gib_A 116 DILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKF--DFIADAGKCK-----------------NNKPHPE 174 (250)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGC--SEECCGGGCC-----------------SCTTSSH
T ss_pred ccchhHHHHHHHHHhcccccccccccc--hhhhHhhhccccccc--ceeecccccC-----------------CCCCcHH
Confidence 467999999999999999998877654 355677888985421 1122111110 1112233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEccCchHHHHhcccccccCCCchHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAVADATDAARGASDIVLTEPGLSVI 641 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIamg~gt~~a~~aaDivl~~~~~~~i 641 (962)
-=..+.+.+.-....|+||||..+|+.|-++|++ .|++++..+. ..||+++ +++..+
T Consensus 175 ~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~--~~ad~vi--~~l~eL 232 (250)
T 4gib_A 175 IFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNYENL--KKANLVV--DSTNQL 232 (250)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCTTTT--TTSSEEE--SSGGGC
T ss_pred HHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEECChhHh--ccCCEEE--CChHhC
Confidence 3334455554444569999999999999999998 6677644332 3589998 456554
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=95.18 E-value=0.026 Score=58.24 Aligned_cols=114 Identities=11% Similarity=0.100 Sum_probs=72.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.|++.++++.|++.| ++.++|+-....+..+.+.+|+.... .. .+... .
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f------------------------~~-~~~~~---~ 146 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEV------------------------EG-RVLIY---I 146 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHT------------------------TT-CEEEE---S
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhc------------------------Ce-eEEec---C
Confidence 57899999999999999 99999999888888888888863210 00 01111 1
Q ss_pred hHHHHHHHHhh--CCCEEEEEcCCcC---ChhhhhcCCee-EEccCc-----hHHHHhc--ccccccCCCchHHHHHH
Q 044543 581 HKYEIVRKLQE--RKHICGMTGDGVN---DAPALKKADIG-IAVADA-----TDAARGA--SDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 581 qK~~iV~~lq~--~g~~v~miGDG~N---D~~aLk~AdVG-Iamg~g-----t~~a~~a--aDivl~~~~~~~i~~~i 645 (962)
.|....+.+.+ ....|+|+||+.| |..+-++|++- |.+..| .+..++. +|+++ +++..+...+
T Consensus 147 ~K~~~~~~~~~~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i--~~~~el~~~l 222 (231)
T 2p11_A 147 HKELMLDQVMECYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTV--ERIGDLVEMD 222 (231)
T ss_dssp SGGGCHHHHHHHSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEE--SSGGGGGGCG
T ss_pred ChHHHHHHHHhcCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceee--cCHHHHHHHH
Confidence 22223333332 3467999999999 65566777763 344322 2233333 88888 4566554433
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=95.13 E-value=0.016 Score=61.37 Aligned_cols=84 Identities=14% Similarity=0.062 Sum_probs=61.5
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCH----HHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEE
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQL----AIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFA 575 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~----~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~a 575 (962)
+++.|++.+.++.|++.|+++.++||... +.+..--+++||..-. .. .++-
T Consensus 100 ~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~--~~-----------------------~Lil 154 (262)
T 3ocu_A 100 SRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVE--ES-----------------------AFYL 154 (262)
T ss_dssp CEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCS--GG-----------------------GEEE
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCccc--cc-----------------------ceec
Confidence 46789999999999999999999998854 4666777789985310 00 1122
Q ss_pred ecCHhhHHHHHHHHhhCC-CEEEEEcCCcCChhh
Q 044543 576 GVFPEHKYEIVRKLQERK-HICGMTGDGVNDAPA 608 (962)
Q Consensus 576 rvsP~qK~~iV~~lq~~g-~~v~miGDG~ND~~a 608 (962)
|-.-..|....+.+.+.| .+|+++||-.+|.++
T Consensus 155 r~~~~~K~~~r~~l~~~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 155 KKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp ESSCSCCHHHHHHHHHTTEEEEEEEESSGGGGCS
T ss_pred cCCCCChHHHHHHHHhcCCCEEEEECCChHHhcc
Confidence 222245777777777764 578999999999886
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=94.91 E-value=0.14 Score=55.14 Aligned_cols=102 Identities=13% Similarity=-0.015 Sum_probs=69.3
Q ss_pred ecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHH---HHHHHH--------hCCCCCCCCcccccccchhccCCcchHH
Q 044543 497 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIA---KETGRR--------LGMGTNMYPSSALLGQIKDANISALPVD 565 (962)
Q Consensus 497 ~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA---~~ia~~--------~Gi~~~~~~~~~l~~~~~~~~~~~~~~~ 565 (962)
..++++.|++.++++.|++.|+++.++||-....+ ...-+. .|+. .. .++.+...
T Consensus 184 ~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~---~~-~~~~~~~~---------- 249 (301)
T 1ltq_A 184 CDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVP---LV-MQCQREQG---------- 249 (301)
T ss_dssp GGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCC---CS-EEEECCTT----------
T ss_pred ccccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCC---ch-heeeccCC----------
Confidence 34678899999999999999999999999875432 233333 6772 11 11111100
Q ss_pred HHhhhcceEEecCHhhHHHHHHHHhhCC-CEEEEEcCCcCChhhhhcCCee-EEccC
Q 044543 566 ELIEKADGFAGVFPEHKYEIVRKLQERK-HICGMTGDGVNDAPALKKADIG-IAVAD 620 (962)
Q Consensus 566 ~~~~~~~v~arvsP~qK~~iV~~lq~~g-~~v~miGDG~ND~~aLk~AdVG-Iamg~ 620 (962)
-.+-.|+-|..+.+.+.... ..++|+||..+|+.|-++|++- |++..
T Consensus 250 --------~~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~~ 298 (301)
T 1ltq_A 250 --------DTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVAS 298 (301)
T ss_dssp --------CCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSC
T ss_pred --------CCcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeEEEecC
Confidence 01223777888888875444 3468999999999999999984 45443
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=94.89 E-value=0.023 Score=58.07 Aligned_cols=118 Identities=10% Similarity=-0.019 Sum_probs=68.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.|++.++++.|++.|+++.++|+.... +..+.+.+|+.... ..++.+... ....-.|+
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~~-~~~~l~~~gl~~~f--~~~~~~~~~-----------------~~~Kp~~~ 154 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASPR-VKTLLEKFDLKKYF--DALALSYEI-----------------KAVKPNPK 154 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHHH-HHHHHHHHTCGGGC--SEEC----------------------------CC
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcHH-HHHHHHhcCcHhHe--eEEEecccc-----------------CCCCCCHH
Confidence 36799999999999999999999998664 67788888874311 111111000 01111122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcC-ChhhhhcCCeeEE-ccCchHHHHhcccccccCCCchHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVN-DAPALKKADIGIA-VADATDAARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~N-D~~aLk~AdVGIa-mg~gt~~a~~aaDivl~~~~~~~i~~~i 645 (962)
--..+.+.+.-. . +|+||+.+ |+.+-++|++... +..+.. ....|.++ +++..+...+
T Consensus 155 ~~~~~~~~~~~~--~-~~vgD~~~~Di~~a~~aG~~~i~v~~~~~--~~~~~~~i--~~l~el~~~l 214 (220)
T 2zg6_A 155 IFGFALAKVGYP--A-VHVGDIYELDYIGAKRSYVDPILLDRYDF--YPDVRDRV--KNLREALQKI 214 (220)
T ss_dssp HHHHHHHHHCSS--E-EEEESSCCCCCCCSSSCSEEEEEBCTTSC--CTTCCSCB--SSHHHHHHHH
T ss_pred HHHHHHHHcCCC--e-EEEcCCchHhHHHHHHCCCeEEEECCCCC--CCCcceEE--CCHHHHHHHH
Confidence 222233333222 2 89999999 9999999998654 332211 01114444 4566665554
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.88 E-value=0.048 Score=57.07 Aligned_cols=40 Identities=23% Similarity=0.209 Sum_probs=35.2
Q ss_pred CCccHHHHHHHHHhCCCcEEEEc---CCCHHHHHHHHHHhCCC
Q 044543 502 PRHDSAETIRRALNLGVNVKMIT---GDQLAIAKETGRRLGMG 541 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miT---GD~~~tA~~ia~~~Gi~ 541 (962)
+-+++.++++.+++.|+++..+| |..........+++|+.
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 55788999999999999999999 99888888888888874
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=94.84 E-value=0.0035 Score=62.49 Aligned_cols=100 Identities=11% Similarity=0.089 Sum_probs=61.9
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCC---------------CHHHHHHHHHHhCCCCCCCCcccccc----cchh-ccCC
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGD---------------QLAIAKETGRRLGMGTNMYPSSALLG----QIKD-ANIS 560 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD---------------~~~tA~~ia~~~Gi~~~~~~~~~l~~----~~~~-~~~~ 560 (962)
++.|++.++++.|++.|+++.++|+- ....+..+.+.+|+. .......+ .... ...+
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---fd~v~~s~~~~~~~~~~~KP~ 118 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ---FDEVLICPHLPADECDCRKPK 118 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC---EEEEEEECCCGGGCCSSSTTS
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC---eeEEEEcCCCCcccccccCCC
Confidence 57899999999999999999999997 466777888888875 11111110 0000 0000
Q ss_pred cchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEccCc
Q 044543 561 ALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG-IAVADA 621 (962)
Q Consensus 561 ~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG-Iamg~g 621 (962)
..-+.. +.+.+.-....|+||||..+|+.+-++|++- |.+..+
T Consensus 119 p~~~~~------------------~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~ 162 (176)
T 2fpr_A 119 VKLVER------------------YLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRE 162 (176)
T ss_dssp CGGGGG------------------GC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred HHHHHH------------------HHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCC
Confidence 011111 1112221233588999999999999999985 555543
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=94.56 E-value=0.011 Score=62.42 Aligned_cols=52 Identities=21% Similarity=0.233 Sum_probs=43.7
Q ss_pred hHHHHHHHHhhCCCEEEEEcC----CcCChhhhhcCC-eeEEccCchHHHHhccccc
Q 044543 581 HKYEIVRKLQERKHICGMTGD----GVNDAPALKKAD-IGIAVADATDAARGASDIV 632 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGD----G~ND~~aLk~Ad-VGIamg~gt~~a~~aaDiv 632 (962)
.|..-++.|.+...-|+++|| |.||.+||+.|+ +|++|+++.|..+.-+++.
T Consensus 187 ~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~~~~~~~~~~ 243 (246)
T 3f9r_A 187 DKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKDTIAEVEKII 243 (246)
T ss_dssp SGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHHHHHHHHHHh
Confidence 688878777765678999999 799999999996 8999999998888665554
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=94.52 E-value=0.049 Score=57.55 Aligned_cols=42 Identities=14% Similarity=0.014 Sum_probs=36.7
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEc---CCCHHHHHHHHHHhCCC
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMIT---GDQLAIAKETGRRLGMG 541 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miT---GD~~~tA~~ia~~~Gi~ 541 (962)
+++-+++.++|++|++.|++++++| |..........+++|+.
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 5566889999999999999999999 88888888888888875
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=94.00 E-value=0.0033 Score=65.07 Aligned_cols=53 Identities=15% Similarity=0.079 Sum_probs=35.2
Q ss_pred HHHHHHHHhh----CCCEEEEEcCC-cCChhhhhcCCeeEEc---cCch-HHHH---hccccccc
Q 044543 582 KYEIVRKLQE----RKHICGMTGDG-VNDAPALKKADIGIAV---ADAT-DAAR---GASDIVLT 634 (962)
Q Consensus 582 K~~iV~~lq~----~g~~v~miGDG-~ND~~aLk~AdVGIam---g~gt-~~a~---~aaDivl~ 634 (962)
|...++.+.+ ....|+|+||+ .||..|++.|++++++ |.+. +..+ ..+|+++.
T Consensus 178 k~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~ 242 (250)
T 2c4n_A 178 SPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYP 242 (250)
T ss_dssp STHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEES
T ss_pred CHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEEC
Confidence 4444444433 23569999999 7999999999998554 4332 2232 36888873
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=93.52 E-value=0.061 Score=57.07 Aligned_cols=41 Identities=17% Similarity=0.236 Sum_probs=33.6
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCC---HHHHHHHHHHhCCC
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQ---LAIAKETGRRLGMG 541 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~---~~tA~~ia~~~Gi~ 541 (962)
++-|++.++|+.|++.|+++.++||.. .......-+.+|+.
T Consensus 101 ~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 101 EALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 567999999999999999999999987 34444555677885
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=92.95 E-value=0.07 Score=56.31 Aligned_cols=41 Identities=17% Similarity=0.145 Sum_probs=35.6
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEc---CCCHHHHHHHHHHhCCCC
Q 044543 501 PPRHDSAETIRRALNLGVNVKMIT---GDQLAIAKETGRRLGMGT 542 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miT---GD~~~tA~~ia~~~Gi~~ 542 (962)
++ +++.++|++++++|++++++| |..........+++|+..
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~ 65 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVET 65 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 35 899999999999999999999 778888888888888853
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=92.61 E-value=0.06 Score=57.01 Aligned_cols=112 Identities=13% Similarity=0.008 Sum_probs=70.0
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHh---CCCCCCCCcccccccchhccCCcchHHHHhhhcceEEec
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL---GMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGV 577 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~---Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arv 577 (962)
++.||+.++++.|+++|+++.++|.-....+..+-+.+ |+.... ..++.+ . +...-
T Consensus 130 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~f--d~i~~~-~------------------~~~KP 188 (261)
T 1yns_A 130 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELV--DGHFDT-K------------------IGHKV 188 (261)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGC--SEEECG-G------------------GCCTT
T ss_pred ccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhc--cEEEec-C------------------CCCCC
Confidence 57899999999999999999999999888777665543 343211 011111 0 00111
Q ss_pred CHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEcc-Cch---HHHHhcccccc
Q 044543 578 FPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG-IAVA-DAT---DAARGASDIVL 633 (962)
Q Consensus 578 sP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG-Iamg-~gt---~~a~~aaDivl 633 (962)
.|+-=..+.+.+.-....|+||||..+|+.+-++|++- |.+. .+. +.....+|.++
T Consensus 189 ~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i 249 (261)
T 1yns_A 189 ESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLI 249 (261)
T ss_dssp CHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEE
T ss_pred CHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEE
Confidence 22322344444444445699999999999999999984 4553 221 11223567776
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=91.53 E-value=0.11 Score=56.91 Aligned_cols=121 Identities=14% Similarity=0.125 Sum_probs=72.3
Q ss_pred ecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhcc--C-Cc-ch-HHHHh---
Q 044543 497 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDAN--I-SA-LP-VDELI--- 568 (962)
Q Consensus 497 ~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~--~-~~-~~-~~~~~--- 568 (962)
.....+.++..+.++.|+++|++|+++||-.......+|..++..-++.+.. +.|...... . .. .. ..+..
T Consensus 139 ~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~-ViG~~~~~~~~~~~~~~~~~~~~~dg~ 217 (327)
T 4as2_A 139 VEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPEN-VIGVTTLLKNRKTGELTTARKQIAEGK 217 (327)
T ss_dssp ECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGG-EEEECEEEECTTTCCEECHHHHHHTTC
T ss_pred ccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHHH-eEeeeeeeecccccccccccccccccc
Confidence 3444678999999999999999999999999999999999863322221222 222211000 0 00 00 00000
Q ss_pred ------hhcceEEe-----cCHhhHHHHHHHHhhC-CCEEEEEcCCc-CChhhhhc--CCeeEEc
Q 044543 569 ------EKADGFAG-----VFPEHKYEIVRKLQER-KHICGMTGDGV-NDAPALKK--ADIGIAV 618 (962)
Q Consensus 569 ------~~~~v~ar-----vsP~qK~~iV~~lq~~-g~~v~miGDG~-ND~~aLk~--AdVGIam 618 (962)
.+...-.+ ..-+.|..-++..-+. ...+++.||+. .|.+||.. ++.|+++
T Consensus 218 y~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L 282 (327)
T 4as2_A 218 YDPKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHL 282 (327)
T ss_dssp CCGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEE
T ss_pred ccccccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEE
Confidence 00001111 1236787777766543 35689999995 79999954 5566655
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=91.45 E-value=0.14 Score=53.34 Aligned_cols=108 Identities=9% Similarity=0.014 Sum_probs=68.2
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.|++.+.++.|++.|+++.++|.... +..+-+.+|+.... ..++.+.... ...-.|+
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~f--d~i~~~~~~~-----------------~~KP~p~ 153 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFF--TFCADASQLK-----------------NSKPDPE 153 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGC--SEECCGGGCS-----------------SCTTSTH
T ss_pred cccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcccc--cccccccccc-----------------CCCCcHH
Confidence 4679999999999999999999998654 44556778875321 1111111111 0111222
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEccCchHHHHhcccccc
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAVADATDAARGASDIVL 633 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIamg~gt~~a~~aaDivl 633 (962)
-=....+.+.-....|+||||..+|+.|-++|++ .|++..|. ..+|.++
T Consensus 154 ~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g~----~~ad~~~ 203 (243)
T 4g9b_A 154 IFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGL----TGAQLLL 203 (243)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTTC----CSCSEEE
T ss_pred HHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCC----CcHHHhc
Confidence 2223344444444569999999999999999998 56665442 2456655
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=90.23 E-value=0.073 Score=54.53 Aligned_cols=90 Identities=20% Similarity=0.212 Sum_probs=55.0
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHH----HHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEec
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLAIAKE----TGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGV 577 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~----ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arv 577 (962)
+.+++.+.++.|++.|+++.++|+-....+.. +....+... .+... ..+.+.
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~--------~~~~~----------------~~~~~~ 144 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA--------TNMNP----------------VIFAGD 144 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT--------TTBCC----------------CEECCC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCccc--------cccch----------------hhhcCC
Confidence 47799999999999999999999986432222 222222210 00000 001111
Q ss_pred --CHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEcc
Q 044543 578 --FPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAVA 619 (962)
Q Consensus 578 --sP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIamg 619 (962)
.|+-.. +.+++.|. ++|+||..+|+.+-++|++ .|.+.
T Consensus 145 KP~p~~~~---~~~~~~g~-~l~VGDs~~Di~aA~~aG~~~i~v~ 185 (211)
T 2b82_A 145 KPGQNTKS---QWLQDKNI-RIFYGDSDNDITAARDVGARGIRIL 185 (211)
T ss_dssp CTTCCCSH---HHHHHTTE-EEEEESSHHHHHHHHHTTCEEEECC
T ss_pred CCCHHHHH---HHHHHCCC-EEEEECCHHHHHHHHHCCCeEEEEe
Confidence 233222 33444454 9999999999999999998 45554
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=88.40 E-value=0.64 Score=48.10 Aligned_cols=43 Identities=19% Similarity=0.188 Sum_probs=30.7
Q ss_pred CCCCCccHHHHHHHHHhCCCcEEEEc---CCCHHHHHHHHHHhCCC
Q 044543 499 FDPPRHDSAETIRRALNLGVNVKMIT---GDQLAIAKETGRRLGMG 541 (962)
Q Consensus 499 ~D~lr~~~~~~I~~l~~aGI~v~miT---GD~~~tA~~ia~~~Gi~ 541 (962)
.+++-+++.++++.+++.|+++..+| |.........-+++|+.
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~ 66 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFE 66 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCC
Confidence 44555788999999999999999999 55555555555566764
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=87.57 E-value=0.67 Score=49.88 Aligned_cols=43 Identities=16% Similarity=0.142 Sum_probs=34.5
Q ss_pred CCCCCccHHHHHHHHHhCCCcEEEEc---CCCHHHHHHHHHHhCCC
Q 044543 499 FDPPRHDSAETIRRALNLGVNVKMIT---GDQLAIAKETGRRLGMG 541 (962)
Q Consensus 499 ~D~lr~~~~~~I~~l~~aGI~v~miT---GD~~~tA~~ia~~~Gi~ 541 (962)
.+++-+++.+++++|++.|++++++| |.........-+++|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 34566789999999999999999999 56666666666777775
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=85.41 E-value=0.63 Score=53.64 Aligned_cols=97 Identities=5% Similarity=-0.054 Sum_probs=58.3
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCC------CHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceE
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGD------QLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGF 574 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD------~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ 574 (962)
++.+|+.++++.|++.|+++.++|+- ......... .|+... . ..++.+.+.. .
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~--~~l~~~-f-d~i~~~~~~~-----------------~ 158 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM--CELKMH-F-DFLIESCQVG-----------------M 158 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH--HHHHTT-S-SEEEEHHHHT-----------------C
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHh--hhhhhh-e-eEEEeccccC-----------------C
Confidence 57899999999999999999999985 222211111 133211 0 1111111100 1
Q ss_pred EecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEc
Q 044543 575 AGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAV 618 (962)
Q Consensus 575 arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIam 618 (962)
..-.|+-=..+.+.+.-....|+|+||..||+.+.++|++....
T Consensus 159 ~KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~ 202 (555)
T 3i28_A 159 VKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTIL 202 (555)
T ss_dssp CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred CCCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEE
Confidence 11223333344455544445689999999999999999986555
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=84.79 E-value=0.031 Score=56.10 Aligned_cols=40 Identities=18% Similarity=0.234 Sum_probs=33.9
Q ss_pred CCCccHHHHHHHHHhC-CCcEEEEcCCCHHHHHHHHHHhCC
Q 044543 501 PPRHDSAETIRRALNL-GVNVKMITGDQLAIAKETGRRLGM 540 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~a-GI~v~miTGD~~~tA~~ia~~~Gi 540 (962)
++.|++.++++.|++. |+++.++|+-....+..+.+.+|+
T Consensus 73 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl 113 (193)
T 2i7d_A 73 EPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW 113 (193)
T ss_dssp CBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred ccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence 5789999999999999 999999999877666666666664
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=81.25 E-value=1 Score=51.10 Aligned_cols=40 Identities=10% Similarity=0.136 Sum_probs=33.5
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCC------------HHHHHHHHHHhCCC
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQ------------LAIAKETGRRLGMG 541 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~------------~~tA~~ia~~~Gi~ 541 (962)
+-+++.++++.|+++|+++.++|+.. ...+..+.+.+|+.
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~ 139 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP 139 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC
Confidence 67999999999999999999999955 22367778888874
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 962 | ||||
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 4e-30 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 3e-26 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 1e-25 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 5e-06 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 3e-20 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 4e-18 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 1e-12 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 4e-10 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 2e-09 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 5e-07 | |
| d1k1ea_ | 177 | c.108.1.5 (A:) Probable phosphatase YrbI {Haemophi | 8e-07 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 2e-06 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 2e-05 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 3e-05 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 5e-05 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 6e-05 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 4e-04 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 6e-04 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 8e-04 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 0.002 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 0.003 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 114 bits (287), Expect = 4e-30
Identities = 61/156 (39%), Positives = 81/156 (51%), Gaps = 1/156 (0%)
Query: 491 QFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGM-GTNMYPSSA 549
DPPR + +I+ + G+ V MITGD A RR+G+ G N +
Sbjct: 10 TGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADR 69
Query: 550 LLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPAL 609
+ ++ E +A FA V P HK +IV LQ I MTGDGVNDAPAL
Sbjct: 70 AYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPAL 129
Query: 610 KKADIGIAVADATDAARGASDIVLTEPGLSVIVSAV 645
KKA+IGIA+ T A+ AS++VL + S IV+AV
Sbjct: 130 KKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAV 165
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 109 bits (274), Expect = 3e-26
Identities = 28/346 (8%), Positives = 82/346 (23%), Gaps = 37/346 (10%)
Query: 323 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTV-----DKNLVEVFVKDMDKDTVILYG-- 375
+ + + + + + + + DK L ++ ++ + +L+
Sbjct: 26 VYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVF 85
Query: 376 -----ARASRVENQDAIDACIVGMLGDA--KEARAGITELHFLPFNPVEKRTAITYIDSD 428
++ + + + + + + L + + +
Sbjct: 86 SIHLIDILKKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKN 145
Query: 429 GSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGG 488
+ + + A + ++ + + A + + + + K+
Sbjct: 146 NIYAALEEFATTE----LHVSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIART 201
Query: 489 PWQFVGLLPLFDP--PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGM------ 540
+ G + P + + G + + TG LG+
Sbjct: 202 TF-KTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEA 260
Query: 541 --GTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGM 598
A P A Y + K +
Sbjct: 261 DFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFI 320
Query: 599 TGDGVNDAPALKKADI-GIAVA-------DATDAARGASDIVLTEP 636
GD + D + +K I A + +D V+
Sbjct: 321 VGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHL 366
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 109 bits (273), Expect = 1e-25
Identities = 45/327 (13%), Positives = 101/327 (30%), Gaps = 93/327 (28%)
Query: 30 IPINEVFEQLKCTRE-GLSNEEGQKRLVIFGPNKL-EEKKESKVLKFLGFMWNPLSWVME 87
E + GL+ ++ ++ L +G N+L E+ +S + + L ++
Sbjct: 7 KSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILL 66
Query: 88 IAAIMAIAL---ANGGGKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQ 144
+AA ++ L G + + I+++L+ N+ + +E NA NA AL
Sbjct: 67 LAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA 126
Query: 145 TKVLRDGAWREQEASILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTKM 204
T+ + P +L + GE L
Sbjct: 127 TEQDKT-------------------------PLQQKLDE-----------FGEQL----- 145
Query: 205 PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTAIGNFCICSI 264
++ +++ G V + I
Sbjct: 146 -------------SKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFK---------I 183
Query: 265 AIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAIT 324
A+ L + IP +P V++ +A+G+ R++++ AI
Sbjct: 184 AVA-------------------------LAVAAIPEGLPAVITTCLALGTRRMAKKNAIV 218
Query: 325 KRMTAIEEMAGMDVLCSDKTGTLTLNK 351
+ + ++E + + ++
Sbjct: 219 RSLPSVETLGRAIYNNMKQFIRYLISS 245
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 47.7 bits (113), Expect = 5e-06
Identities = 48/285 (16%), Positives = 91/285 (31%), Gaps = 45/285 (15%)
Query: 614 IGIAVADATDA---------ARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVS 664
+ +AVA + A G + + + S RAI+ MK + Y +S
Sbjct: 185 VALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLIS 244
Query: 665 ITI-RIVLGFLLIALIWKFDFSPFMVLIIAILNDGT-------------IMTISKDRVKP 710
+ +V FL AL P +L + ++ DG IM R
Sbjct: 245 SNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDR-PPRSPK 303
Query: 711 SPVPDTWKLKEIFATGIVLGTYLAVMTVLFFWAIHSS---TFFSEKFGVRSIRDSPH--- 764
P+ W A G +G +F T+ ++ D PH
Sbjct: 304 EPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEG 363
Query: 765 --------ELTAAVYLQVSIVSQAL-IFVTRSRSWSFLERPGL---LLIAAFIIAQLVAT 812
+ L V + + + S + S + P L+ + ++ +
Sbjct: 364 LDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLS-MSLH 422
Query: 813 LIAVYANFG--FARIHGIGWGWVGVIWLYSIVFYIPLDVLKFIVR 855
+ +Y + ++ + ++ S+ ++LKFI R
Sbjct: 423 FLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIAR 467
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 85.5 bits (211), Expect = 3e-20
Identities = 43/155 (27%), Positives = 62/155 (40%), Gaps = 31/155 (20%)
Query: 491 QFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 550
D + + ++ +G+ V MITGD A+ R L + +
Sbjct: 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL-- 68
Query: 551 LGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALK 610
P K E V+KLQ K + GDG+NDAPAL
Sbjct: 69 ----------------------------PHQKSEEVKKLQ-AKEVVAFVGDGINDAPALA 99
Query: 611 KADIGIAVADATDAARGASDIVLTEPGLSVIVSAV 645
+AD+GIAV +D A + DIVL L +V+A+
Sbjct: 100 QADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAI 134
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 79.0 bits (194), Expect = 4e-18
Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 17/112 (15%)
Query: 146 KVLRDGAWREQE--ASILVPGDVISIKLGDIIPADARLLDGDP--LKIDQSALTGESLPV 201
KV R Q A +VPGD++ + +GD +PAD R+L L++DQS LTGES+ V
Sbjct: 4 KVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSV 63
Query: 202 TKMPGDE-------------VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 240
K +FSG+ G+ +V TGV T GK +
Sbjct: 64 IKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 65.6 bits (159), Expect = 1e-12
Identities = 28/143 (19%), Positives = 52/143 (36%), Gaps = 23/143 (16%)
Query: 386 AIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYID--SDGSWHRISKGAPEQII 443
A+ CI G ++ R ++ + FN K + + S + KGAPE+I+
Sbjct: 71 ALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERIL 130
Query: 444 ELCN----------LREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKT----------- 482
+ C+ L +++++ + G R L + ++P
Sbjct: 131 DRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDE 190
Query: 483 KESPGGPWQFVGLLPLFDPPRHD 505
P FVGL+ + D H
Sbjct: 191 LNFPTEKLCFVGLMSMIDHHHHH 213
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 59.1 bits (142), Expect = 4e-10
Identities = 32/189 (16%), Positives = 67/189 (35%), Gaps = 23/189 (12%)
Query: 313 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFVKDMDKDTVI 372
G + + + + + E+A + LC+D + + V V + + +
Sbjct: 33 GEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFN------ETKGVYEKVGEATETALT 86
Query: 373 LYGARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWH 432
+ + + + + R + + L F+ K ++ + S
Sbjct: 87 TLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRA 146
Query: 433 R-----ISKGAPEQIIELCN----------LREDVRNKAHTIIDKF--ADRGLRSLAVAE 475
KGAPE +I+ CN + V+ K ++I ++ LR LA+A
Sbjct: 147 AVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALAT 206
Query: 476 QSVPEKTKE 484
+ P K +E
Sbjct: 207 RDTPPKREE 215
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 56.9 bits (136), Expect = 2e-09
Identities = 23/157 (14%), Positives = 46/157 (29%), Gaps = 6/157 (3%)
Query: 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANIS 560
R E + + +I+G + +Y + A
Sbjct: 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDN------D 128
Query: 561 ALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVAD 620
+ +D + K ++ +L E M GD V D A K +D+ A
Sbjct: 129 YIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDY 188
Query: 621 ATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKN 657
+ R + L I + + + + ++N
Sbjct: 189 LLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQN 225
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.5 bits (117), Expect = 5e-07
Identities = 24/151 (15%), Positives = 45/151 (29%), Gaps = 13/151 (8%)
Query: 489 PWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSS 548
+ E + R V V +I+G +I + +L + ++
Sbjct: 70 EQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFAN 129
Query: 549 ALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHI--CGMTGDGVNDA 606
L E + K ++++ L+E+ H M GDG D
Sbjct: 130 RLKFYFNG---------EYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDM 180
Query: 607 PALKKADIGIAVA--DATDAARGASDIVLTE 635
A AD I + + +T+
Sbjct: 181 EACPPADAFIGFGGNVIRQQVKDNAKWYITD 211
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Score = 48.1 bits (114), Expect = 8e-07
Identities = 15/59 (25%), Positives = 23/59 (38%)
Query: 579 PEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPG 637
++++++ GD D PA AVADA + A D VL+ G
Sbjct: 82 ETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHG 140
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 47.7 bits (112), Expect = 2e-06
Identities = 15/68 (22%), Positives = 22/68 (32%)
Query: 578 FPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPG 637
+ L + GDG ND A K +AVA A + +D V +
Sbjct: 153 KGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEY 212
Query: 638 LSVIVSAV 645
A+
Sbjct: 213 GEGGAEAI 220
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 44.5 bits (104), Expect = 2e-05
Identities = 11/58 (18%), Positives = 17/58 (29%)
Query: 578 FPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTE 635
+ K + V + + GD ND L +A GI + R
Sbjct: 130 QKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVH 187
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 44.2 bits (103), Expect = 3e-05
Identities = 13/50 (26%), Positives = 17/50 (34%)
Query: 596 CGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAV 645
+ GD ND P + A+ATD + SD V I
Sbjct: 170 ILVIGDSNNDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIF 219
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 43.3 bits (100), Expect = 5e-05
Identities = 17/72 (23%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Query: 574 FAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVL 633
E +I + GDG ND KKA + IA A + +DI +
Sbjct: 139 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICI 197
Query: 634 TEPGLSVIVSAV 645
+ L I+ +
Sbjct: 198 EKRDLREILKYI 209
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 43.5 bits (101), Expect = 6e-05
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 596 CGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646
+ GD ND L AVA+ATD+A+ + VL V+ +L
Sbjct: 226 VLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLL 276
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 41.1 bits (95), Expect = 4e-04
Identities = 11/53 (20%), Positives = 22/53 (41%)
Query: 580 EHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIV 632
+ L + GD ND ++ A +G+AV +A + + ++ V
Sbjct: 200 TGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFV 252
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 40.3 bits (93), Expect = 6e-04
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 581 HKYEIVRKLQERKHI----CGMTGDGVNDAPALKKADIGIAVADATDAARGASDIV 632
K + + ++ I GDG ND L+ A IG+A+ A + + A+D V
Sbjct: 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYV 241
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 40.3 bits (93), Expect = 8e-04
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 600 GDGVNDAPALKKADIGIAVADATDAARGASDIV 632
GD +ND L+ A G+A+ +A + + +D V
Sbjct: 236 GDSLNDKSMLEAAGKGVAMGNAREDIKSIADAV 268
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 38.8 bits (89), Expect = 0.002
Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 600 GDGVNDAPALKKADIGIAVADATDAARGASDIVLT---EPGLSVIVSAVLTSRAIF 652
GD NDA LK A A+ +A + + + G ++ AVL + F
Sbjct: 213 GDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTYPF 268
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 38.4 bits (88), Expect = 0.003
Identities = 13/53 (24%), Positives = 27/53 (50%)
Query: 580 EHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIV 632
+ + ++ +K + GD ND ++A + +A+ +A + + ASDIV
Sbjct: 193 KALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIV 245
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 962 | |||
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 100.0 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 100.0 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.96 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.92 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.91 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.8 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.53 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.17 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.08 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.97 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.96 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.88 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.87 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.78 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.75 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.69 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.67 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.63 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.57 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.55 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.31 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.28 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.08 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 98.06 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.5 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.28 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.23 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.2 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.17 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.1 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 96.75 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 96.68 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.33 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 95.95 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 95.83 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 95.66 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 95.65 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 95.6 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 95.54 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 94.75 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 94.67 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 94.61 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 94.06 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 93.92 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 92.2 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 92.09 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 91.97 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 91.28 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 90.94 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 90.53 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 90.0 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 89.55 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 88.85 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 85.45 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 85.17 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 83.17 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=3.8e-37 Score=358.41 Aligned_cols=231 Identities=19% Similarity=0.242 Sum_probs=180.6
Q ss_pred ccccCCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-cchHHHHHHhhhhhHHHHHHHHHHHHHHHHcC---C
Q 044543 26 DLERIPINEVFEQLKCT-REGLSNEEGQKRLVIFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEIAAIMAIALANG---G 100 (962)
Q Consensus 26 ~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~i~~~~-~~~~~~~l~~~~~~~~~~l~~~ail~~~l~~~---~ 100 (962)
|.|..+.||+++.|+|+ ++|||++|+++|+++||+|++++++ .++|+.|+++|++|+.++++++++++++++.. .
T Consensus 3 ~~h~~~~e~v~~~l~td~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~ 82 (472)
T d1wpga4 3 AAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGE 82 (472)
T ss_dssp TGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSCTT
T ss_pred ChhhCCHHHHHHHhCcCcccCcCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhccc
Confidence 68999999999999999 5799999999999999999998765 78889999999999999999999999998642 2
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhcCCCCeEEEEECCeEEEEECcCcCCCcEEEEeCCCeeecceE
Q 044543 101 GKPPDWQDFVGIVVLLLINSTISFIEENNAGNAAAALMAGLAPQTKVLRDGAWREQEASILVPGDVISIKLGDIIPADAR 180 (962)
Q Consensus 101 ~~~~~~~~~~~i~~~~~i~~~i~~~~e~~~~~~~~~l~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ 180 (962)
....+|.++++|++++++|+.++++||+|++++++++++..++. ..||++|+|.+
T Consensus 83 ~~~~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~~-------------------------~~~~~~P~d~~ 137 (472)
T d1wpga4 83 ETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA-------------------------TEQDKTPLQQK 137 (472)
T ss_dssp STTSSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSCCC-------------------------CCCCCCHHHHH
T ss_pred ccchhHhHhhhhhheeeeeeeEEeEEechHHHHHHHHhhhcccc-------------------------ccccCchHHHH
Confidence 33458999999999999999999999999999999999876654 35788898887
Q ss_pred EEecCCeeEecccccCCCeeeecCCCCcccccceeecceEEEEEEEecchhHHHhHHHhhhccCCCChHHHHHHHHHHHH
Q 044543 181 LLDGDPLKIDQSALTGESLPVTKMPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVLTAIGNFC 260 (962)
Q Consensus 181 ll~g~~~~Vdes~LTGEs~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~l~~~~~~i~~~~ 260 (962)
+.+ +||+.+ .+.++|..+|..|.+|++...+....
T Consensus 138 l~~-----------~g~~i~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 172 (472)
T d1wpga4 138 LDE-----------FGEQLS------------------KVISLICVAVWLINIGHFNDPVHGGS---------------- 172 (472)
T ss_dssp HHH-----------HHHHHH------------------HHHHHHHHHHHHHCCTTSSSCCSSSC----------------
T ss_pred HHH-----------HHHHHH------------------HHHHHHHHHHHHHHHHHHHHHHhhhh----------------
Confidence 643 122110 00011111222222222211111100
Q ss_pred HHHHHHHHHHHHHHHhhccccchHhHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhcCCcccccCchHHhhcCceEEE
Q 044543 261 ICSIAIGMVIEIIVMYPIQHRAYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLC 340 (962)
Q Consensus 261 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~lli~~iP~aL~~~~~i~~~~~~~~l~~~~ilvk~~~~iE~Lg~v~~i~ 340 (962)
....+.+.+..++++.++++|++||+++++++++|++||+|+|++||++.++|++|+..+.|
T Consensus 173 ------------------~~~~~~~~~~~ai~l~V~~iPEgLp~~vti~La~~~~rmak~~~lVr~L~avE~~g~~~~~~ 234 (472)
T d1wpga4 173 ------------------WIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNN 234 (472)
T ss_dssp ------------------SSSCGGGHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESCTTHHHHHTHHHHHH
T ss_pred ------------------hHHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHH
Confidence 01234456777888999999999999999999999999999999999999999999999999
Q ss_pred eccc
Q 044543 341 SDKT 344 (962)
Q Consensus 341 ~DKT 344 (962)
+|||
T Consensus 235 ~~k~ 238 (472)
T d1wpga4 235 MKQF 238 (472)
T ss_dssp HHHH
T ss_pred hHHh
Confidence 9887
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=4.2e-34 Score=284.56 Aligned_cols=148 Identities=41% Similarity=0.546 Sum_probs=134.3
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCC--cccccccchhccCCcchHHHHhhhcceEEec
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP--SSALLGQIKDANISALPVDELIEKADGFAGV 577 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~v~arv 577 (962)
||||+|++++|+.||++||+|||+|||++.||+++|+++||..+... ...+.+.+. ...+..+..+..++..+|||+
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~v~ar~ 97 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREF-DDLPLAEQREACRRACCFARV 97 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHH-HHSCHHHHHHHHHHCCEEESC
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCcccccccccccccc-chhhHHHHhhhhhhhhhhhcc
Confidence 99999999999999999999999999999999999999999765322 122333333 355667788889999999999
Q ss_pred CHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHHHH
Q 044543 578 FPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTS 648 (962)
Q Consensus 578 sP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~g 648 (962)
+|+||..+|+.||++|++|+|+|||+||+|||++|||||+|++|+++|+++||++|++++|+.++++|+||
T Consensus 98 ~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 98 EPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred chhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEeccccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999997
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.96 E-value=9.6e-30 Score=243.03 Aligned_cols=124 Identities=35% Similarity=0.500 Sum_probs=109.0
Q ss_pred EEEEeecCCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhc
Q 044543 492 FVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKA 571 (962)
Q Consensus 492 llG~i~i~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 571 (962)
..+.++++|++|+|++++|+.|+++||+++|+|||+..+|.++|++|||.
T Consensus 12 ~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~------------------------------ 61 (135)
T d2b8ea1 12 GTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD------------------------------ 61 (135)
T ss_dssp CCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS------------------------------
T ss_pred eEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh------------------------------
Confidence 35578899999999999999999999999999999999999999999983
Q ss_pred ceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 572 DGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 572 ~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
.+|++++|++|..+|+.+|+. +.|+|+|||.||+|||++|||||+|++++++++++||++|++++|+.|+.+|+
T Consensus 62 ~v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 62 LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp EEECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEECCC--------SEEESSCCTHHHHHHHC
T ss_pred hhccccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCeeeecCccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 379999999999999999875 58999999999999999999999999999999999999999999999999874
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.92 E-value=6.4e-30 Score=288.93 Aligned_cols=312 Identities=9% Similarity=-0.038 Sum_probs=211.2
Q ss_pred CchHHhhcCceEEEecccccccCCceEEEEEeeee-----cccCCChH-HHHHHHHHhc----cccCCChHHHHHHHhhc
Q 044543 327 MTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEV-----FVKDMDKD-TVILYGARAS----RVENQDAIDACIVGMLG 396 (962)
Q Consensus 327 ~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~-----~~~~~~~~-~~l~~a~~~~----~~~~~~~~~~al~~~~~ 396 (962)
..+.|.||..+++|+|||||+|.|+|++..+..+. -..+.+.+ +++...+.+. .....++.+.+++....
T Consensus 30 l~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k~~g~n~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (380)
T d1qyia_ 30 LMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLIDILKKLSHDEIEAFMYQDE 109 (380)
T ss_dssp HHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHCSS
T ss_pred hhchhhcccceeeecCcccchhhhhheeeeecchhhhHhhhhcCCChhHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHh
Confidence 45669999999999999999999999764422100 00122222 2222121111 11233555666655443
Q ss_pred Chh----hhhcCceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHHHhccchHHHHHHHHHHHHHHhcCCeEEE
Q 044543 397 DAK----EARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIELCNLREDVRNKAHTIIDKFADRGLRSLA 472 (962)
Q Consensus 397 ~~~----~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~GlR~L~ 472 (962)
... ..++.+.....+||++.+|+|++.....++.+..+.+|+++.+ ...+.....+...++.++.+|+|+++
T Consensus 110 ~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~----~~~~~~~~~~~~~~~~~a~~~~r~l~ 185 (380)
T d1qyia_ 110 PVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTEL----HVSDATLFSLKGALWTLAQEVYQEWY 185 (380)
T ss_dssp CHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHT----TCSCCGGGSTTCHHHHHHHHHHHHHH
T ss_pred hccchHHHHHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhc----CCcHHHHHHHHhHHHHHHHHHHHHHH
Confidence 222 2345566677889999999998665444444444556666543 22233344566778899999999999
Q ss_pred EEeecCCCCCCCCCCCCceEEEEeecCCCCC--ccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccc
Q 044543 473 VAEQSVPEKTKESPGGPWQFVGLLPLFDPPR--HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSAL 550 (962)
Q Consensus 473 ~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr--~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l 550 (962)
+|++..++.+.+ ...+....|++..+|++| +|++++++.|+++||+++|+|||+..+|..+++++||........++
T Consensus 186 ~~~~~~~~~~~~-~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~ 264 (380)
T d1qyia_ 186 LGSKLYEDVEKK-IARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIA 264 (380)
T ss_dssp HHHHHHHHHHCS-CCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEE
T ss_pred Hhhhcccccccc-cchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEE
Confidence 998865432211 122334568899999855 59999999999999999999999999999999999996533222233
Q ss_pred cccchh--------ccCCcchHHHHhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCC---eeEEcc
Q 044543 551 LGQIKD--------ANISALPVDELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKAD---IGIAVA 619 (962)
Q Consensus 551 ~~~~~~--------~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~Ad---VGIamg 619 (962)
.+.+.. ......+-.+.+..+..++|++|+||..+|+.++..++.|+|||||+||+||+|+|| |||+||
T Consensus 265 ~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G 344 (380)
T d1qyia_ 265 TASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTG 344 (380)
T ss_dssp CHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCB
T ss_pred ecchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecC
Confidence 222110 000111111233344568999999999999999999999999999999999999999 999998
Q ss_pred -CchHHHHh----cccccccCCCchHHHHHH
Q 044543 620 -DATDAARG----ASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 620 -~gt~~a~~----aaDivl~~~~~~~i~~~i 645 (962)
.|++++++ .||+++ +++..+...+
T Consensus 345 ~~g~~~~~el~~~~AD~ii--~~~~el~~il 373 (380)
T d1qyia_ 345 LKGKDAAGELEAHHADYVI--NHLGELRGVL 373 (380)
T ss_dssp TTBGGGHHHHHHTTCSEEE--SSGGGHHHHH
T ss_pred CCCcccHHHHHhCCCCEEE--CCHHHHHHHH
Confidence 67765544 899999 6777776655
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.91 E-value=1e-24 Score=201.06 Aligned_cols=97 Identities=38% Similarity=0.576 Sum_probs=88.8
Q ss_pred eEEEEECCeE--EEEECcCcCCCcEEEEeCCCeeecceEEEec--CCeeEecccccCCCeeeecCC-------------C
Q 044543 144 QTKVLRDGAW--REQEASILVPGDVISIKLGDIIPADARLLDG--DPLKIDQSALTGESLPVTKMP-------------G 206 (962)
Q Consensus 144 ~~~V~Rdg~~--~~i~~~~Lv~GDiI~l~~Gd~VPaD~~ll~g--~~~~Vdes~LTGEs~pv~K~~-------------g 206 (962)
.++|+|+|++ ++|++++|+|||||.|++||+|||||+|+++ .++.||||+|||||.|+.|.+ .
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~ 81 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKK 81 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCT
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccccccc
Confidence 5799999985 7899999999999999999999999999864 358999999999999999975 3
Q ss_pred CcccccceeecceEEEEEEEecchhHHHhHHHhh
Q 044543 207 DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 240 (962)
Q Consensus 207 ~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~ 240 (962)
+.+|+||.+.+|+++++|++||.+|.+||+++++
T Consensus 82 n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 82 NMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp TEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred ceEEeccEEEeeeEEEEEEEEccccHHHHHHHhC
Confidence 5699999999999999999999999999998764
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.80 E-value=2.5e-19 Score=185.21 Aligned_cols=122 Identities=20% Similarity=0.344 Sum_probs=99.8
Q ss_pred CChHHHHHHHhhc----ChhhhhcCceEeeecCCCCCCceEEEEEEcC--CCCEEEEEeCcHHHHHHHhcc---------
Q 044543 384 QDAIDACIVGMLG----DAKEARAGITELHFLPFNPVEKRTAITYIDS--DGSWHRISKGAPEQIIELCNL--------- 448 (962)
Q Consensus 384 ~~~~~~al~~~~~----~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~--~g~~~~~~KGa~e~il~~~~~--------- 448 (962)
++|.|.|++.++. +....+..++.++.+||+|.+|||+++++.+ ++++.+|+|||||.|+++|+.
T Consensus 65 GdptE~ALl~~a~~~~~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~~ 144 (214)
T d1q3ia_ 65 GDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIP 144 (214)
T ss_dssp SCHHHHHHHHHHHHHHSCHHHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEEE
T ss_pred cChHHHHHHHHHHHhCCCHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCceee
Confidence 5999999998763 4556788899999999999999999999865 467889999999999999973
Q ss_pred -chHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCC-----------CCCCCCCceEEEEeecCCCCCcc
Q 044543 449 -REDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKT-----------KESPGGPWQFVGLLPLFDPPRHD 505 (962)
Q Consensus 449 -~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~-----------~~~~e~~l~llG~i~i~D~lr~~ 505 (962)
+++.++.+.+.+++|+.+|+||||+||+.++.++ .+..+++|+|+|+++|+||||++
T Consensus 145 l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 145 LDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred chHHHHHHHHHHHHHHhhCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 5677889999999999999999999999987543 24457899999999999999975
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.53 E-value=3.1e-15 Score=156.79 Aligned_cols=115 Identities=23% Similarity=0.367 Sum_probs=91.7
Q ss_pred CChHHHHHHHhhcCh--------------------hhhhcCceEeeecCCCCCCceEEEEEEcCCC-----CEEEEEeCc
Q 044543 384 QDAIDACIVGMLGDA--------------------KEARAGITELHFLPFNPVEKRTAITYIDSDG-----SWHRISKGA 438 (962)
Q Consensus 384 ~~~~~~al~~~~~~~--------------------~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g-----~~~~~~KGa 438 (962)
++|.|.|++.++... ...+..++.++.+||+|.||||+++++.+++ .+.+|+|||
T Consensus 78 G~pTE~ALl~~a~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGA 157 (239)
T d1wpga3 78 GEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGA 157 (239)
T ss_dssp SCHHHHHHHHHHHHHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEEC
T ss_pred CCCCcHHHHHHHHHhCCChHHhhccchhhhhccchhhhhhhCeEEEEeeecccccEEEEEEEcCCCCcccceeEEEEeCC
Confidence 478888887765311 1124678899999999999999999987654 368999999
Q ss_pred HHHHHHHhcc----------chHHHHHHHHHHHHH--HhcCCeEEEEEeecCCCCCC----------CCCCCCceEEEEe
Q 044543 439 PEQIIELCNL----------REDVRNKAHTIIDKF--ADRGLRSLAVAEQSVPEKTK----------ESPGGPWQFVGLL 496 (962)
Q Consensus 439 ~e~il~~~~~----------~~~~~~~~~~~i~~~--a~~GlR~L~~A~~~~~~~~~----------~~~e~~l~llG~i 496 (962)
||.|+++|+. +++.++.+.+.++++ +++|+|||++|||+++.++. +.+|++|+|+|++
T Consensus 158 pe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~A~k~~~~~~~~~~~~~~~~~~~~E~~L~flGlv 237 (239)
T d1wpga3 158 PEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVV 237 (239)
T ss_dssp HHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEE
T ss_pred hHHHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHhhCCCEEEEEEEEECCcccccccccchhhHHHhcCCCEEEEEE
Confidence 9999999973 456777888888876 67999999999999976532 2357899999999
Q ss_pred ec
Q 044543 497 PL 498 (962)
Q Consensus 497 ~i 498 (962)
+|
T Consensus 238 gi 239 (239)
T d1wpga3 238 GM 239 (239)
T ss_dssp EE
T ss_pred CC
Confidence 86
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.17 E-value=5.3e-11 Score=121.82 Aligned_cols=147 Identities=23% Similarity=0.228 Sum_probs=104.8
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCc--ccc-c-cc-----------------------
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS--SAL-L-GQ----------------------- 553 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~--~~l-~-~~----------------------- 553 (962)
.+.+.+.++|++|+++|++++++||+....+...++.+++....... ..+ . +.
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 98 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhccc
Confidence 46789999999999999999999999999999999999985421100 000 0 00
Q ss_pred -----chh----------ccCCcchHHHHhhhcc---------eEEec--CHhhHHHHHHHHhhC----CCEEEEEcCCc
Q 044543 554 -----IKD----------ANISALPVDELIEKAD---------GFAGV--FPEHKYEIVRKLQER----KHICGMTGDGV 603 (962)
Q Consensus 554 -----~~~----------~~~~~~~~~~~~~~~~---------v~arv--sP~qK~~iV~~lq~~----g~~v~miGDG~ 603 (962)
... .....+.+.+++.+.. .+..+ ....|...++.+.++ .+.|+++|||.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~ 178 (230)
T d1wr8a_ 99 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 178 (230)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCc
Confidence 000 0011112333333211 11222 345778877776553 45699999999
Q ss_pred CChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHHH
Q 044543 604 NDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLT 647 (962)
Q Consensus 604 ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~ 647 (962)
||.|||+.|++||||+++.+.++++||+|+..++..++.+++.+
T Consensus 179 NDi~ml~~ag~~vav~na~~~~k~~A~~v~~~~~~~gv~~~i~~ 222 (230)
T d1wr8a_ 179 NDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIYH 222 (230)
T ss_dssp GGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHHH
T ss_pred cHHHHHHHCCeEEEECCCCHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 99999999999999999999999999999999999999888764
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.08 E-value=2.9e-10 Score=116.66 Aligned_cols=149 Identities=21% Similarity=0.168 Sum_probs=105.1
Q ss_pred CCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCc--cccccc--chhc-----------------
Q 044543 499 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS--SALLGQ--IKDA----------------- 557 (962)
Q Consensus 499 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~--~~l~~~--~~~~----------------- 557 (962)
+.++.+++.+++++|++.|++++++||.+...+..++..+|+....... ..+... ....
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 97 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHh
Confidence 3456789999999999999999999999999999999999985421100 000000 0000
Q ss_pred ------------------cCCcchHHHHhh---hc--ce-----EEecCH--hhHHHHHHHHhhC----CCEEEEEcCCc
Q 044543 558 ------------------NISALPVDELIE---KA--DG-----FAGVFP--EHKYEIVRKLQER----KHICGMTGDGV 603 (962)
Q Consensus 558 ------------------~~~~~~~~~~~~---~~--~v-----~arvsP--~qK~~iV~~lq~~----g~~v~miGDG~ 603 (962)
.......+.+.. .. .+ +..+.| ..|...++.+.++ ...|+++|||.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~ 177 (225)
T d1l6ra_ 98 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 177 (225)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred cCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCc
Confidence 011112222211 11 11 223334 4788888877653 23488999999
Q ss_pred CChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHHH
Q 044543 604 NDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLT 647 (962)
Q Consensus 604 ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~ 647 (962)
||.+|++.|++||||+++.+.+++.||+|+..++..+|.+++++
T Consensus 178 nD~~m~~~a~~~vav~na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 178 NDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp GGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred chHHHHHHCCeEEEECCCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 99999999999999999999999999999999999999988863
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.97 E-value=5.6e-10 Score=110.21 Aligned_cols=100 Identities=25% Similarity=0.287 Sum_probs=82.2
Q ss_pred HHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhhHHHHHH
Q 044543 508 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEHKYEIVR 587 (962)
Q Consensus 508 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~qK~~iV~ 587 (962)
.+|+.|++.|+.+.++||++...+...++++++.. ++.. ..+|...++
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~------------------------------~~~~--~~~K~~~l~ 86 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL------------------------------FFLG--KLEKETACF 86 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE------------------------------EEES--CSCHHHHHH
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc------------------------------cccc--cccHHHHHH
Confidence 47999999999999999999999999999999742 1222 234555555
Q ss_pred HHhh-C---CCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCch
Q 044543 588 KLQE-R---KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLS 639 (962)
Q Consensus 588 ~lq~-~---g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~ 639 (962)
.+.+ . ...|+++|||.||.|||+.|++|+||++|.+.+++.||+|+..++=.
T Consensus 87 ~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~nA~~~vk~~A~~Vt~~~GG~ 142 (177)
T d1k1ea_ 87 DLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGK 142 (177)
T ss_dssp HHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTT
T ss_pred HHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcCCccHHHHHhCCEEeCCCCCC
Confidence 4433 2 36799999999999999999999999999999999999999887633
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.96 E-value=2.6e-10 Score=116.77 Aligned_cols=125 Identities=18% Similarity=0.187 Sum_probs=91.5
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccc----cccchhccCCcchHHHHhhhcceEEe
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSAL----LGQIKDANISALPVDELIEKADGFAG 576 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l----~~~~~~~~~~~~~~~~~~~~~~v~ar 576 (962)
+++|++.+.|+.|++.|++++++||.....+..+++.+|+.....-...+ .|.... . .....-
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g-----~--------~~~~p~ 148 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAG-----F--------DETQPT 148 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEE-----E--------CTTSGG
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhcccc-----c--------eeeeee
Confidence 36899999999999999999999999999999999999996321100000 010000 0 000011
Q ss_pred cCHhhHHHHHHHHhhC--CCEEEEEcCCcCChhhhhcCCeeEEcc--CchHHHHhcccccccCCCchH
Q 044543 577 VFPEHKYEIVRKLQER--KHICGMTGDGVNDAPALKKADIGIAVA--DATDAARGASDIVLTEPGLSV 640 (962)
Q Consensus 577 vsP~qK~~iV~~lq~~--g~~v~miGDG~ND~~aLk~AdVGIamg--~gt~~a~~aaDivl~~~~~~~ 640 (962)
..+..|.++++.++++ -..|.|+|||.||++|++.|+++||++ ......++.||+++. +|..
T Consensus 149 ~~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~--~f~e 214 (217)
T d1nnla_ 149 AESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVE 214 (217)
T ss_dssp GSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGG
T ss_pred eccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeC--CHHH
Confidence 3467899999999874 246899999999999999999999996 355666678999984 4544
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.88 E-value=4.4e-10 Score=115.03 Aligned_cols=146 Identities=14% Similarity=0.061 Sum_probs=105.0
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCccccc-ccchhccCCcchHHHHhhhcceEEecCH
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALL-GQIKDANISALPVDELIEKADGFAGVFP 579 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~v~arvsP 579 (962)
+++|++.+.++.|++.|+++.++|+-....+..+.+++|+....+...... +..... ..-......+++..|
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~-------~~~~~~~~~~~~~k~ 147 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHI-------DWPHSCKGTCSNQCG 147 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEE-------ECTTCCCTTCCSCCS
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCccee-------ccccccccccccCCH
Confidence 468999999999999999999999999999999999998754322111110 000000 000001123567789
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHh-cccccccCCCchHHHHHHHHHHHHHHH
Q 044543 580 EHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARG-ASDIVLTEPGLSVIVSAVLTSRAIFQR 654 (962)
Q Consensus 580 ~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~-aaDivl~~~~~~~i~~~i~~gR~~~~~ 654 (962)
+.|..+++.++..++.|+|+||+.||.+|+++||+++|++...+.+++ ..+++- -++|+.|...++.-..+.+.
T Consensus 148 ~~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~~-~~d~~~i~~~l~~~~~~~~~ 222 (226)
T d2feaa1 148 CCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLP-YQDFYEIRKEIENVKEVQEW 222 (226)
T ss_dssp SCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEEC-CSSHHHHHHHHHTSHHHHHH
T ss_pred HHHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEecchHHHHHHcCCCeee-cCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999865555543 344332 36898888888655444443
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.87 E-value=2.3e-09 Score=112.65 Aligned_cols=71 Identities=20% Similarity=0.219 Sum_probs=60.4
Q ss_pred ecCHh--hHHHHHHHHhhC----CCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 576 GVFPE--HKYEIVRKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 576 rvsP~--qK~~iV~~lq~~----g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
.++|. .|...|+.+.+. ...++++|||.||.+||+.|+.|+||+++.+..++.||++...++-.++.++++
T Consensus 190 ~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 190 EILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp EEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred EecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCcChHHHHHH
Confidence 34554 599999888764 235889999999999999999999999999999999999998877778887775
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.78 E-value=3.9e-09 Score=111.71 Aligned_cols=70 Identities=19% Similarity=0.290 Sum_probs=60.8
Q ss_pred cCHh--hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 577 VFPE--HKYEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 577 vsP~--qK~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
++|. .|..-++.+.+. | ..|+++|||.||.+||+.|+.||||++|++.+++.||++...++-.++.++++
T Consensus 207 i~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~ 282 (285)
T d1nrwa_ 207 LSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMK 282 (285)
T ss_dssp EEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 4554 799988888764 2 35999999999999999999999999999999999999998888888888775
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.75 E-value=1.5e-09 Score=114.12 Aligned_cols=72 Identities=19% Similarity=0.229 Sum_probs=61.7
Q ss_pred EecCHh--hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 575 AGVFPE--HKYEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 575 arvsP~--qK~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
-.++|. .|..-++.|.++ | ..|.++|||.||.|||+.|+.|+||++|.+.+|+.||+|+.+++-.++..+|+
T Consensus 182 ~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 182 IDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp EEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 355664 599999888764 3 35889999999999999999999999999999999999998888888887775
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.69 E-value=2.7e-08 Score=99.05 Aligned_cols=129 Identities=16% Similarity=0.157 Sum_probs=92.8
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
+..++....++.+ +.+.++..+|+.............++............. ..........+.
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---------------~~~~~~~~~~~~ 132 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDS---------------DRVVGYQLRQKD 132 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTT---------------SCEEEEECCSSS
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeecc---------------cccccccccchh
Confidence 3456666666665 578999999999999999999998875321110000000 001123344566
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
.+...++.++-....|+|+|||.||.|||+.|++||||+...++.++++|++.. .++..++.++.
T Consensus 133 ~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmna~~~v~~~~~~~~~~-~~~~d~~~~~~ 197 (206)
T d1rkua_ 133 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFL 197 (206)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCEE-CSHHHHHHHHH
T ss_pred hHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEECCCHHHHHhCCCceee-cCHHHHHHHHH
Confidence 677788888888899999999999999999999999997667777788888764 56778877664
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.67 E-value=1e-08 Score=102.51 Aligned_cols=136 Identities=21% Similarity=0.181 Sum_probs=92.2
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCH
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFP 579 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP 579 (962)
.++.+++.+.++.++..|..+.++||.....+....++.++...... .+........ ... ......+...+
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~-----~~~~~~~~~~~ 144 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFAN--RLIVKDGKLT--GDV-----EGEVLKENAKG 144 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE--EEEEETTEEE--EEE-----ECSSCSTTHHH
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhh--hhcccccccc--ccc-----ccccccccccc
Confidence 46788999999999999999999999999999999999887432100 0000000000 000 00000001112
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHH
Q 044543 580 EHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 580 ~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i 645 (962)
.-...+.+.++-..+.|.++|||.||.||++.|++|||| ++.+..++.||+|+..+++..|++.|
T Consensus 145 ~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~-na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 145 EILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE-SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred chhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE-CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 222333333433455689999999999999999999999 78888999999999888888887654
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.63 E-value=9e-09 Score=107.71 Aligned_cols=73 Identities=26% Similarity=0.285 Sum_probs=61.6
Q ss_pred EecCHh--hHHHHHHHHhhC----CCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHHH
Q 044543 575 AGVFPE--HKYEIVRKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLT 647 (962)
Q Consensus 575 arvsP~--qK~~iV~~lq~~----g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~~ 647 (962)
..+.|. .|..-++.|.++ ...++++|||.||.+||+.|+.||||++|++.+|+.||+|..+++-.++.++|++
T Consensus 178 ~ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 178 ADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp CEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 344554 698888888653 3458899999999999999999999999999999999999888888889888853
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.57 E-value=5e-08 Score=102.30 Aligned_cols=71 Identities=27% Similarity=0.312 Sum_probs=60.6
Q ss_pred ecCHh--hHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCCchHHHHHHH
Q 044543 576 GVFPE--HKYEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 576 rvsP~--qK~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
.++|. .|...|+.+.+. | ..|+++|||.||.|||+.|++||+|++|++.+|+.||+++.+++-.++.++|+
T Consensus 183 di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred eecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 45564 688888877653 2 34888999999999999999999999999999999999999888888888874
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.55 E-value=2.5e-08 Score=104.82 Aligned_cols=66 Identities=26% Similarity=0.296 Sum_probs=52.8
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccCCC-chHHHHHHH
Q 044543 581 HKYEIVRKLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPG-LSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~----g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~~~-~~~i~~~i~ 646 (962)
.|..-++.+.+. ...|+++|||.||.+||+.|++|++|++|.+.+|+.||+++..++ -..+..+++
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCCHHHHHhCCEEECCcCCCcHHHHHHH
Confidence 566666666542 346999999999999999999999999999999999999997554 344555554
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.31 E-value=4.7e-07 Score=92.49 Aligned_cols=44 Identities=11% Similarity=0.077 Sum_probs=39.7
Q ss_pred CCCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCC
Q 044543 499 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT 542 (962)
Q Consensus 499 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~ 542 (962)
.+...+.+.++|++|+++|+++++.||.+...+..+.+.+++..
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~ 58 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence 45556789999999999999999999999999999999999854
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.28 E-value=6.7e-07 Score=91.91 Aligned_cols=68 Identities=19% Similarity=0.152 Sum_probs=55.3
Q ss_pred HhhHHHHHHHHhhC-C---CEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccc-------cccCCCchHHHHHHH
Q 044543 579 PEHKYEIVRKLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARGASDI-------VLTEPGLSVIVSAVL 646 (962)
Q Consensus 579 P~qK~~iV~~lq~~-g---~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDi-------vl~~~~~~~i~~~i~ 646 (962)
...|...++.+.+. | ..|.++|||.||.|||+.|+.|++|+++.+.+++.||. +-..++..++.++++
T Consensus 160 ~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~ 238 (244)
T d1s2oa1 160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred ccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHHHHHHhhcccccceEEcCCCCccHHHHHHH
Confidence 45799999888775 2 34889999999999999999999999999999999984 444455667777765
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.08 E-value=4.9e-06 Score=83.73 Aligned_cols=41 Identities=17% Similarity=0.093 Sum_probs=38.3
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCC
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 541 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~ 541 (962)
.+.+.+.++|++|+++|+.++++||.+...+..+.+++|+.
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 36688999999999999999999999999999999999985
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=98.06 E-value=8.1e-06 Score=76.14 Aligned_cols=122 Identities=20% Similarity=0.270 Sum_probs=89.7
Q ss_pred ccCCChHHHHHHHHHhccccCCChHHHHHHHhhcChhh---hhcCceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcH
Q 044543 363 VKDMDKDTVILYGARASRVENQDAIDACIVGMLGDAKE---ARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAP 439 (962)
Q Consensus 363 ~~~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~---~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~ 439 (962)
..+.++++++.+|+.++..++ ||+..|++.++.+... ...........||....+...+. .+| ..+.+|++
T Consensus 10 ~~G~~~~ell~~AA~aE~~Se-HPlakAIv~~Ak~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~g--~~v~~G~~ 83 (136)
T d2a29a1 10 AQGVDEKTLADAAQLASLADE-TPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGIN---IDN--RMIRKGSV 83 (136)
T ss_dssp CTTCCHHHHHHHHHHHHHTCC-SHHHHHHHHHHHHHHCCCCCCTTTTTCEEEEEETTTTEEEEE---ETT--EEEEEECH
T ss_pred CCCCCHHHHHHHHHHHhCCCC-chHHHHHHHHHHHhcCCCccccccccccccccccccceEEEE---ECC--EEEEecHH
Confidence 468999999999999987665 9999999998853321 11233334556776666544432 256 57889999
Q ss_pred HHHHHHhcc-chHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeecCCCCC
Q 044543 440 EQIIELCNL-REDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPLFDPPR 503 (962)
Q Consensus 440 e~il~~~~~-~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i~D~lr 503 (962)
..+.+.+.. .......+.+.+++++.+|.+++.+|... +++|++++.|++|
T Consensus 84 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va~d~-------------~~~G~i~l~D~iK 135 (136)
T d2a29a1 84 DAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIALKDIVK 135 (136)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEEETT-------------EEEEEEEEEESSC
T ss_pred HHHHHHHHHcCCCCcHHHHHHHHHHHHCCCeEEEEEECC-------------EEEEEEEEEeecC
Confidence 887665432 12345667788899999999999999866 8999999999986
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.50 E-value=8.1e-05 Score=74.80 Aligned_cols=123 Identities=14% Similarity=0.177 Sum_probs=81.9
Q ss_pred CCccHHHHHHHHHhCC-CcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEe-cCH
Q 044543 502 PRHDSAETIRRALNLG-VNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAG-VFP 579 (962)
Q Consensus 502 lr~~~~~~I~~l~~aG-I~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar-vsP 579 (962)
+-||+.+++++|++.| +++.++||.....+..+.+..|+.... . .++.+.. +..+ -.|
T Consensus 92 ~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~f-d-~i~~~~~------------------~~~~k~~p 151 (228)
T d2hcfa1 92 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF-P-FGAFADD------------------ALDRNELP 151 (228)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC-S-CEECTTT------------------CSSGGGHH
T ss_pred ecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccc-c-ccccccc------------------cccccchh
Confidence 4689999999999987 899999999999999999999986432 1 1111110 0000 012
Q ss_pred hhHHHHHHHHhhC---CCEEEEEcCCcCChhhhhcCCe---eEEccC--chHHHHhcccccccCCCchHHHHHHH
Q 044543 580 EHKYEIVRKLQER---KHICGMTGDGVNDAPALKKADI---GIAVAD--ATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 580 ~qK~~iV~~lq~~---g~~v~miGDG~ND~~aLk~AdV---GIamg~--gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
+--...++.+... .+.|+||||+.+|..|-+.|++ ||+-|. ..+..+..+|+++ ++++.+...+.
T Consensus 152 ~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi--~~~~el~~~l~ 224 (228)
T d2hcfa1 152 HIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLF--KNFAETDEVLA 224 (228)
T ss_dssp HHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEE--SCSCCHHHHHH
T ss_pred HHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEE--CCHHHHHHHHH
Confidence 2222333444322 3569999999999999999995 444442 2333455689998 67888777764
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.28 E-value=0.00023 Score=72.83 Aligned_cols=126 Identities=13% Similarity=0.105 Sum_probs=86.4
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+|+.++++.|++.|+++.++||.....+..+-++.|+..-.. ...+.+.... ...-.|+
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~-d~~~~~d~~~-----------------~~KP~p~ 160 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKP-DFLVTPDDVP-----------------AGRPYPW 160 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCC-SCCBCGGGSS-----------------CCTTSSH
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhccccc-cccccccccc-----------------ccccChH
Confidence 478999999999999999999999999999999999999854221 1122211110 1122344
Q ss_pred hHHHHHHHHhhC-CCEEEEEcCCcCChhhhhcCCe-eEEccCch------H---------------------HHHhcccc
Q 044543 581 HKYEIVRKLQER-KHICGMTGDGVNDAPALKKADI-GIAVADAT------D---------------------AARGASDI 631 (962)
Q Consensus 581 qK~~iV~~lq~~-g~~v~miGDG~ND~~aLk~AdV-GIamg~gt------~---------------------~a~~aaDi 631 (962)
.=....+.+.-. ...|+||||..+|+.+=++|++ .|++..|. + ..+.-||+
T Consensus 161 ~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad~ 240 (257)
T d1swva_ 161 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHF 240 (257)
T ss_dssp HHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCCE
Confidence 444555555532 3569999999999999999997 34553221 0 11123899
Q ss_pred cccCCCchHHHHHHH
Q 044543 632 VLTEPGLSVIVSAVL 646 (962)
Q Consensus 632 vl~~~~~~~i~~~i~ 646 (962)
++ +++..+..+|.
T Consensus 241 vi--~~l~eL~~ii~ 253 (257)
T d1swva_ 241 TI--ETMQELESVME 253 (257)
T ss_dssp EE--SSGGGHHHHHH
T ss_pred EE--CCHHHHHHHHH
Confidence 99 77888887775
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.23 E-value=0.00015 Score=76.00 Aligned_cols=132 Identities=12% Similarity=0.053 Sum_probs=81.1
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCC--ccc--ccccchhccCCcchHHHHhhhcceEEe
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP--SSA--LLGQIKDANISALPVDELIEKADGFAG 576 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~--~~~--l~~~~~~~~~~~~~~~~~~~~~~v~ar 576 (962)
++|+|+++.++.|++.|+++.++||--......+.+++|+..+... +.. ..++.......+. -
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~-------------~ 201 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGE-------------L 201 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSS-------------C
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccCC-------------c
Confidence 4899999999999999999999999999999999999998643110 000 0000000000000 0
Q ss_pred cCHhhHHHHH----HHHh--hCCCEEEEEcCCcCChhhhhc---CCeeEEcc---Cc----hHHHHhcccccccCCCchH
Q 044543 577 VFPEHKYEIV----RKLQ--ERKHICGMTGDGVNDAPALKK---ADIGIAVA---DA----TDAARGASDIVLTEPGLSV 640 (962)
Q Consensus 577 vsP~qK~~iV----~~lq--~~g~~v~miGDG~ND~~aLk~---AdVGIamg---~g----t~~a~~aaDivl~~~~~~~ 640 (962)
.....|...+ ...+ .....|.++|||+||.+|.+. ++.++++| +- .+.=.++-||||.+|.--.
T Consensus 202 i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~~ 281 (291)
T d2bdua1 202 IHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLE 281 (291)
T ss_dssp CCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBCH
T ss_pred cccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCCChh
Confidence 0112222221 1222 234578899999999999874 45555554 21 1223467899998887666
Q ss_pred HHHHH
Q 044543 641 IVSAV 645 (962)
Q Consensus 641 i~~~i 645 (962)
++..+
T Consensus 282 v~~~i 286 (291)
T d2bdua1 282 VVNSI 286 (291)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55554
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.20 E-value=6e-05 Score=75.16 Aligned_cols=124 Identities=16% Similarity=0.119 Sum_probs=85.1
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.|+++++++.|++.|+++.++||.....+..+.+++||.... . ..+...... ...-.|+
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f-~-~~~~~~~~~-----------------~~kp~p~ 155 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF-S-EMLGGQSLP-----------------EIKPHPA 155 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC-S-EEECTTTSS-----------------SCTTSSH
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhc-c-ccccccccc-----------------cccccch
Confidence 35799999999999999999999999999999999999985321 1 111111000 1112244
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEccC----chHHHHhcccccccCCCchHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARGASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIamg~----gt~~a~~aaDivl~~~~~~~i~~~i 645 (962)
--..+.+.++-....++|+||..+|..+-++|++ .|.+.. ..+.....+|+++ +++..++.+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v--~~l~dL~~ii 223 (224)
T d2hsza1 156 PFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIF--DDFADILKIT 223 (224)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEE--SSGGGGGGGT
T ss_pred hhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEE--CCHHHHHHhh
Confidence 4445555555566779999999999999999997 555531 2233444588888 5677666543
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.17 E-value=9.4e-05 Score=73.74 Aligned_cols=57 Identities=12% Similarity=0.226 Sum_probs=42.5
Q ss_pred ecCHh--hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccccccC
Q 044543 576 GVFPE--HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTE 635 (962)
Q Consensus 576 rvsP~--qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDivl~~ 635 (962)
.+.|. .|..-++.|.++.. ++++||+.||.+|++.|+-|+||+.|. ++.+|++.+.+
T Consensus 152 di~p~g~~Kg~al~~l~~~~~-~i~~GDs~ND~~Mf~~~~~~~av~~g~--~~~~A~~~~~~ 210 (229)
T d1u02a_ 152 ELRVPGVNKGSAIRSVRGERP-AIIAGDDATDEAAFEANDDALTIKVGE--GETHAKFHVAD 210 (229)
T ss_dssp EEECTTCCHHHHHHHHHTTSC-EEEEESSHHHHHHHHTTTTSEEEEESS--SCCCCSEEESS
T ss_pred EEecCCCCHHHHHHHHhcccc-ceeecCCCChHHHHhccCCeEEEEeCC--CCccCeEEcCC
Confidence 44443 69999999988754 568899999999999997776664332 24578888843
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.10 E-value=0.00016 Score=71.84 Aligned_cols=119 Identities=18% Similarity=0.196 Sum_probs=80.4
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.||+.++++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.... .+.-.|+
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F--~~i~~~~~~~-----------------~~Kp~~~ 148 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSF--DALASAEKLP-----------------YSKPHPQ 148 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEECTTSS-----------------CCTTSTH
T ss_pred cccchHHHHHHHhhhccccccccccccccccccccccccccccc--cccccccccc-----------------cchhhHH
Confidence 35699999999999999999999999999999999999995321 1122111110 1122233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEccC--c-hHHHHhcccccccCCCchH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAVAD--A-TDAARGASDIVLTEPGLSV 640 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIamg~--g-t~~a~~aaDivl~~~~~~~ 640 (962)
-=..+.+.+.-....++|+||..+|+.|-++|++ .|++.. . .+.-...||+++ ++|..
T Consensus 149 ~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i--~~l~e 210 (218)
T d1te2a_ 149 VYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKL--SSLTE 210 (218)
T ss_dssp HHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEEC--SCGGG
T ss_pred HHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEE--CChhh
Confidence 3445555555556679999999999999999997 344422 1 222234678887 45554
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.75 E-value=0.00036 Score=69.67 Aligned_cols=53 Identities=19% Similarity=0.293 Sum_probs=46.1
Q ss_pred hHHHHHHHHhhC-CCEEEEEcC----CcCChhhhhcCC-eeEEccCchHHHHhcccccc
Q 044543 581 HKYEIVRKLQER-KHICGMTGD----GVNDAPALKKAD-IGIAVADATDAARGASDIVL 633 (962)
Q Consensus 581 qK~~iV~~lq~~-g~~v~miGD----G~ND~~aLk~Ad-VGIamg~gt~~a~~aaDivl 633 (962)
.|..-++.|.+. ..-|.++|| |.||.+||+.|+ .|+||+++.|.++..+|+++
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~~k~~~~~~~ 243 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFF 243 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHC
T ss_pred cHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHHHHHHHHhcC
Confidence 577777877653 557999999 569999999997 69999999999999999987
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.68 E-value=0.00033 Score=69.02 Aligned_cols=120 Identities=10% Similarity=0.030 Sum_probs=82.3
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+++.+.++.++..| ++.++|+.....+..+.+.+|+.... ..++.+. . .....|+
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~f--d~v~~~~-~------------------~~~~~p~ 141 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFF--DGIYGSS-P------------------EAPHKAD 141 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEEC-S------------------SCCSHHH
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccc--ccccccc-c------------------ccccccc
Confidence 46789999999998775 89999999999999999999985421 1111100 0 1223344
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEc--c--CchHHHHhcccccccCCCchHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAV--A--DATDAARGASDIVLTEPGLSVIVSA 644 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIam--g--~gt~~a~~aaDivl~~~~~~~i~~~ 644 (962)
.-..+.+.++-....++||||+.||..|-++|++ .|++ | ...+.....+|+++ +++..+...
T Consensus 142 ~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi--~~l~el~~~ 208 (210)
T d2ah5a1 142 VIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIA--HKPLEVLAY 208 (210)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEE--SSTTHHHHH
T ss_pred ccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEE--CCHHHHHHH
Confidence 4444555554445679999999999999999998 5555 4 22333444589998 557766654
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.33 E-value=0.0042 Score=59.88 Aligned_cols=134 Identities=17% Similarity=0.136 Sum_probs=76.0
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHHH---------------HHHHHHHhCCCCCCCCcccccccchhccCCcchHHH
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLAI---------------AKETGRRLGMGTNMYPSSALLGQIKDANISALPVDE 566 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~t---------------A~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~ 566 (962)
+-|++.++++.|+++|+++.++|...... ........|+.... ........+ .....
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~cp~~p~-----~~~~~ 99 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDG---IYYCPHHPQ-----GSVEE 99 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSE---EEEECCBTT-----CSSGG
T ss_pred ECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcccccc---eeecccccc-----ccccc
Confidence 44899999999999999999999865210 11111122221100 000000000 00000
Q ss_pred HhhhcceEEecCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee--EEc--cC-chHHHHhcccccccCCCchHH
Q 044543 567 LIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG--IAV--AD-ATDAARGASDIVLTEPGLSVI 641 (962)
Q Consensus 567 ~~~~~~v~arvsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG--Iam--g~-gt~~a~~aaDivl~~~~~~~i 641 (962)
......+..-.|.-=..+.+.+.-....+.||||..+|..|=++|+++ +.+ |. -.+.....||+++ +++..+
T Consensus 100 -~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~--~~l~dl 176 (182)
T d2gmwa1 100 -FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLADL 176 (182)
T ss_dssp -GBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGGH
T ss_pred -ccccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEE--CCHHHH
Confidence 000001122234444455555554455689999999999999999995 444 32 2345566799998 778888
Q ss_pred HHHHH
Q 044543 642 VSAVL 646 (962)
Q Consensus 642 ~~~i~ 646 (962)
++.|+
T Consensus 177 ~~~ik 181 (182)
T d2gmwa1 177 PQAIK 181 (182)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 88775
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.95 E-value=0.0065 Score=60.30 Aligned_cols=124 Identities=16% Similarity=0.129 Sum_probs=79.7
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
+|.||+.++++.|+ .|+++.++|+........+.+.+|+.... . .++..... ....-.|+
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~f-d-~i~~s~~~-----------------~~~KP~~~ 159 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLF-D-SITTSEEA-----------------GFFKPHPR 159 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGC-S-EEEEHHHH-----------------TBCTTSHH
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhccccccccc-c-cccccccc-----------------cccchhhH
Confidence 46899999999996 58999999999999999999999985321 1 11110000 01111222
Q ss_pred hHHHHHHHHhhCCCEEEEEcCC-cCChhhhhcCCeeE-Ec--cCchHHHHhcccccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDG-VNDAPALKKADIGI-AV--ADATDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG-~ND~~aLk~AdVGI-am--g~gt~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
-=..+.+.+.-....|+|+||. .+|+.+-++|++-. .+ +.........+|+++ ++++.++..|.
T Consensus 160 ~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~ 227 (230)
T d1x42a1 160 IFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVD 227 (230)
T ss_dssp HHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEE--SSTTHHHHHHH
T ss_pred HHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEE--CCHHHHHHHHH
Confidence 2223334443334569999997 69999999998842 33 222223345689988 66888888775
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=95.83 E-value=0.0057 Score=60.79 Aligned_cols=115 Identities=14% Similarity=0.033 Sum_probs=74.9
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
.+.||+.+++++|++.|+++.++|+..........+.+|+..-....... .+.. ....-.|+
T Consensus 127 ~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~-----------------~~~KP~p~ 188 (253)
T d1zs9a1 127 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGH-FDTK-----------------IGHKVESE 188 (253)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEE-ECGG-----------------GCCTTCHH
T ss_pred ccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhccee-eccc-----------------cccCCCcH
Confidence 46899999999999999999999999999988888888875321100000 0000 01122233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeE-Ec---cC-chHHHHhcccccc
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGI-AV---AD-ATDAARGASDIVL 633 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGI-am---g~-gt~~a~~aaDivl 633 (962)
-=....+.+.-....|+||||..+|+.+-++|++-. .+ |+ ...-....++.++
T Consensus 189 ~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i 246 (253)
T d1zs9a1 189 SYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLI 246 (253)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEE
T ss_pred HHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEE
Confidence 333444555444567999999999999999999844 33 32 1222333567776
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=95.66 E-value=0.00072 Score=66.49 Aligned_cols=119 Identities=10% Similarity=0.036 Sum_probs=78.0
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhh
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEH 581 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~q 581 (962)
+.||+.++++.|+ .++++.++|+-....+..+.++.|+.... ..++.+... ....-.|+-
T Consensus 83 ~~~g~~~~L~~l~-~~~~~~ivT~~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~p~~ 142 (207)
T d2hdoa1 83 LYPGITSLFEQLP-SELRLGIVTSQRRNELESGMRSYPFMMRM--AVTISADDT-----------------PKRKPDPLP 142 (207)
T ss_dssp ECTTHHHHHHHSC-TTSEEEEECSSCHHHHHHHHTTSGGGGGE--EEEECGGGS-----------------SCCTTSSHH
T ss_pred cccchhhhhhhhc-ccccccccccccccccccccccccccccc--ccccccccc-----------------ccchhhhhh
Confidence 5689999999997 47999999999999999999999875321 111111100 011112444
Q ss_pred HHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEc---cCchHHHHhcccccccCCCchHHH
Q 044543 582 KYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAV---ADATDAARGASDIVLTEPGLSVIV 642 (962)
Q Consensus 582 K~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIam---g~gt~~a~~aaDivl~~~~~~~i~ 642 (962)
-..+++.++-....|+||||..+|..+-++|++.... |..+....+.+|+++ .++..|+
T Consensus 143 ~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i--~~l~dll 204 (207)
T d2hdoa1 143 LLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRF--QKPLDIL 204 (207)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEE--SSGGGGG
T ss_pred hcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEe--CCHHHHH
Confidence 4455555543445689999999999999999987553 433333445678877 4555543
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.65 E-value=0.0035 Score=61.02 Aligned_cols=118 Identities=17% Similarity=0.086 Sum_probs=75.9
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.||+.++++.|++.|+++.++|+... .+..+-++.|+.... ..++ +.... ....-.|+
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f--~~i~-~s~~~----------------~~~Kp~~~ 141 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYF--TEIL-TSQSG----------------FVRKPSPE 141 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGE--EEEE-CGGGC----------------CCCTTSSH
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhccccccc--cccc-ccccc----------------cccchhHH
Confidence 3579999999999999999999998554 456778889985321 1111 11100 01122344
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEccCchHHHHhcccccccCCCchHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAVADATDAARGASDIVLTEPGLSVIVSA 644 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIamg~gt~~a~~aaDivl~~~~~~~i~~~ 644 (962)
--..+.+.+.-....|+||||+.+|..+-++|++ .|++..+. ..+|..+ +++..+..+
T Consensus 142 ~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~~----~~~~~~~--~~~~dl~~l 200 (204)
T d2go7a1 142 AATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST----YEGNHRI--QALADISRI 200 (204)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS----CTTEEEC--SSTTHHHHH
T ss_pred HHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEcCCC----CCcCeec--CCHHHHHHH
Confidence 4445555555455679999999999999999998 44565443 1355555 345555443
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.60 E-value=0.0077 Score=56.79 Aligned_cols=94 Identities=14% Similarity=0.049 Sum_probs=64.7
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCC-HHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecC-
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQ-LAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVF- 578 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~-~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvs- 578 (962)
++.|++.++++.|++.|+++.++|+-+ ...+...-+..++..... .+++.-.
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~--------------------------~~~~~~kp 99 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFI--------------------------QREIYPGS 99 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCS--------------------------EEEESSSC
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccce--------------------------eeecccCC
Confidence 478999999999999999999999654 456666667766532110 0112222
Q ss_pred -HhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEccC
Q 044543 579 -PEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAVAD 620 (962)
Q Consensus 579 -P~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIamg~ 620 (962)
|+.-..+.+.+.-....++|+||..+|..+-++|++ .|.+..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~i~v~~ 143 (164)
T d1u7pa_ 100 KVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRD 143 (164)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSS
T ss_pred ChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEEEEECC
Confidence 333344455554455679999999999999999988 455543
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.54 E-value=0.02 Score=50.46 Aligned_cols=104 Identities=14% Similarity=0.180 Sum_probs=69.6
Q ss_pred CCChHHHHHHHHHhccccCCChHHHHHHHhhcChhhhhcCceEeeecCCCCCCceEEEEEEcCCCCEEEEEeCcHHHHHH
Q 044543 365 DMDKDTVILYGARASRVENQDAIDACIVGMLGDAKEARAGITELHFLPFNPVEKRTAITYIDSDGSWHRISKGAPEQIIE 444 (962)
Q Consensus 365 ~~~~~~~l~~a~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~ 444 (962)
+.++++++.+++..+..++ ||+..|++.++.+........+..+..|-.. + .|+ .+.-|+++.+.+
T Consensus 9 ~~~e~elL~~aaslE~~S~-HPlA~AIv~~a~~~~~~~~~~~~~~~~~G~G------i-----~g~--~v~vG~~~~~~~ 74 (113)
T d2b8ea2 9 NGDERELLRLAAIAERRSE-HPIAEAIVKKALEHGIELGEPEKVEVIAGEG------V-----VAD--GILVGNKRLMED 74 (113)
T ss_dssp SSCHHHHHHHHHHHTTTCC-SHHHHHHHHHHHTTTCCCCCCSCEEEETTTE------E-----EET--TEEEECHHHHHH
T ss_pred CCCHHHHHHHHHHHHCcCC-CchHHHHHHHHHHhcCCCCccccceeeccce------E-----EeE--EEEECcHHHHHh
Confidence 3578899999988877655 9999999999865332112222222222111 1 112 255699998765
Q ss_pred HhccchHHHHHHHHHHHHHHhcCCeEEEEEeecCCCCCCCCCCCCceEEEEeec
Q 044543 445 LCNLREDVRNKAHTIIDKFADRGLRSLAVAEQSVPEKTKESPGGPWQFVGLLPL 498 (962)
Q Consensus 445 ~~~~~~~~~~~~~~~i~~~a~~GlR~L~~A~~~~~~~~~~~~e~~l~llG~i~i 498 (962)
.. .++.+.+.+.++.+..+|..++.++... +++|++++
T Consensus 75 ~~---~~~~~~~~~~~~~~~~~G~T~v~va~d~-------------~~~G~ial 112 (113)
T d2b8ea2 75 FG---VAVSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAV 112 (113)
T ss_dssp TT---CCCCHHHHHHHHHHHTTTCEEEEEEETT-------------EEEEEEEE
T ss_pred cC---CCCCHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEE
Confidence 32 2344567778889999999999999876 89999886
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.75 E-value=0.017 Score=57.55 Aligned_cols=123 Identities=11% Similarity=0.104 Sum_probs=79.0
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHhh
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPEH 581 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~q 581 (962)
+.||+.++++.|++ |+++.++|+.........-+++|+.... . .++...... .+.-.|+=
T Consensus 110 ~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f-d-~i~~s~~~~-----------------~~KP~p~~ 169 (247)
T d2gfha1 110 LADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYF-D-AIVIGGEQK-----------------EEKPAPSI 169 (247)
T ss_dssp CCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGC-S-EEEEGGGSS-----------------SCTTCHHH
T ss_pred cCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccccc-c-ccccccccc-----------------cchhhhhh
Confidence 67999999999985 8999999999999999999999985321 1 111111100 11111221
Q ss_pred HHHHHHHHhhCCCEEEEEcCCc-CChhhhhcCCee-EEc--cCc--hHHHHhcccccccCCCchHHHHHHH
Q 044543 582 KYEIVRKLQERKHICGMTGDGV-NDAPALKKADIG-IAV--ADA--TDAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 582 K~~iV~~lq~~g~~v~miGDG~-ND~~aLk~AdVG-Iam--g~g--t~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
=..+.+.+.-....|+||||.. +|+.+-+.|++. +.. +.+ .+.....+|+++ +++..+..+++
T Consensus 170 ~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i--~~l~eL~~ll~ 238 (247)
T d2gfha1 170 FYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMV--SSVLELPALLQ 238 (247)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEE--SSGGGHHHHHH
T ss_pred HHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEE--CCHHHHHHHHH
Confidence 1233344433345699999996 899999999995 543 111 112223478888 56888877775
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=94.67 E-value=0.024 Score=54.23 Aligned_cols=109 Identities=14% Similarity=0.035 Sum_probs=67.4
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++.+|+++.++.|++.|+++.++|+-...+. ++-+.+|+.... ..++.+.... ...-.|+
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~f--d~i~~~~~~~-----------------~~KP~p~ 138 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYF--TEVVTSSSGF-----------------KRKPNPE 138 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGE--EEEECGGGCC-----------------CCTTSCH
T ss_pred cccchhHHHHHHHHhhhccccccccCccchh-hhhhhhcccccc--cccccccccc-----------------ccCCCHH
Confidence 4679999999999999999999999766554 567788875321 1111111100 0011122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCeeEEccCchHHHHhcccc
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDI 631 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVGIamg~gt~~a~~aaDi 631 (962)
--..+.+.+.- ..++|+||..+|..|-++|++=...=++..-.++.-||
T Consensus 139 ~~~~~~~~~~~--~~~l~vgDs~~Di~aA~~aG~~~i~v~~~~~~~~~~d~ 187 (187)
T d2fi1a1 139 SMLYLREKYQI--SSGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLDI 187 (187)
T ss_dssp HHHHHHHHTTC--SSEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHTC
T ss_pred HHHHHHHHcCC--CCeEEEeCCHHHHHHHHHcCCEEEEECCCCChHhhcCC
Confidence 22333333332 34899999999999999998853332344445555553
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=94.61 E-value=0.0097 Score=54.75 Aligned_cols=99 Identities=14% Similarity=0.016 Sum_probs=62.2
Q ss_pred CCCCCccHHHHHHHHHhCCCcEEEEcCCCHH----HHHHHHH------H-hCCCCCCCCcccccccchhccCCcchHHHH
Q 044543 499 FDPPRHDSAETIRRALNLGVNVKMITGDQLA----IAKETGR------R-LGMGTNMYPSSALLGQIKDANISALPVDEL 567 (962)
Q Consensus 499 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~~~----tA~~ia~------~-~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~ 567 (962)
+|++.|++.+.++.|++.|+++.++||-... |...+.. . .+... ..+..
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~-----~~~~~--------------- 93 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPL-----VMQCQ--------------- 93 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCC-----SEEEE---------------
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcE-----EEeec---------------
Confidence 5789999999999999999999999997632 1111111 0 00000 00000
Q ss_pred hhhcceEEecCHhhHHHHHHHHhhC-CCEEEEEcCCcCChhhhhcCCe-eEEcc
Q 044543 568 IEKADGFAGVFPEHKYEIVRKLQER-KHICGMTGDGVNDAPALKKADI-GIAVA 619 (962)
Q Consensus 568 ~~~~~v~arvsP~qK~~iV~~lq~~-g~~v~miGDG~ND~~aLk~AdV-GIamg 619 (962)
...--.|-.+.-|..+.+.+... ..+++|+||-..|+.|.+++++ .|.+.
T Consensus 94 --~~~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~ 145 (149)
T d1ltqa1 94 --REQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVA 145 (149)
T ss_dssp --CCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECS
T ss_pred --ccccccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCcEEEeC
Confidence 00000122346677888777665 4567889999999999999988 44443
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.06 E-value=0.025 Score=55.56 Aligned_cols=142 Identities=15% Similarity=0.214 Sum_probs=92.4
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCccc-cc-----ccchh---------ccCCcchHH-
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA-LL-----GQIKD---------ANISALPVD- 565 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~-l~-----~~~~~---------~~~~~~~~~- 565 (962)
+-||+.++++.++++ ....++|---.+-+.++|+.+|++.+.+.... +. ..+.+ ...+.+++.
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel~e 160 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELFR 160 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCceeecccccccccCCChHHHHHHHHHhhhccCccHHHHHH
Confidence 458999999999887 67788888888889999999999643111100 00 00000 001111111
Q ss_pred ------------HHhhhcceEEecCHhhHHHHHHHHhh-CC-CEEEEEcCCcCChhhhhcCCe--eEEcc-CchHHHHhc
Q 044543 566 ------------ELIEKADGFAGVFPEHKYEIVRKLQE-RK-HICGMTGDGVNDAPALKKADI--GIAVA-DATDAARGA 628 (962)
Q Consensus 566 ------------~~~~~~~v~arvsP~qK~~iV~~lq~-~g-~~v~miGDG~ND~~aLk~AdV--GIamg-~gt~~a~~a 628 (962)
++++++.... -..|..+++..-+ .+ ..-+.+||.+.|+.||+.|.= |+|++ +|.+=|...
T Consensus 161 ~~d~~f~~~e~~~i~e~Vk~VG---gg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Yal~e 237 (308)
T d1y8aa1 161 KLDELFSRSEVRKIVESVKAVG---AGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYALKH 237 (308)
T ss_dssp HHHHHHHSHHHHHHHHTCBCCC---HHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHHTT
T ss_pred HHHHHhccchHhhHHhhhcccC---CchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCccccccc
Confidence 2222222221 2566666654433 12 224789999999999999854 99998 999999999
Q ss_pred ccccccCCCchHHHHHHHH
Q 044543 629 SDIVLTEPGLSVIVSAVLT 647 (962)
Q Consensus 629 aDivl~~~~~~~i~~~i~~ 647 (962)
||+++.+++...+...+..
T Consensus 238 A~VaiiS~~~~a~~~i~dl 256 (308)
T d1y8aa1 238 ADVVIISPTAMSEAKVIEL 256 (308)
T ss_dssp CSEEEECSSTHHHHHHHHH
T ss_pred cceEEeccchhHHHHHHHH
Confidence 9999999998877776653
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=93.92 E-value=0.021 Score=55.68 Aligned_cols=91 Identities=19% Similarity=0.257 Sum_probs=65.4
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCC----HHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEec
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQ----LAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGV 577 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~----~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arv 577 (962)
+-+++.+.++.+++.|++|+.|||.. ..|+.++-+.+|++........+.+...
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~~---------------------- 144 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKP---------------------- 144 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCT----------------------
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCCC----------------------
Confidence 46799999999999999999999975 3577787788998654322222222110
Q ss_pred CHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEc
Q 044543 578 FPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAV 618 (962)
Q Consensus 578 sP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIam 618 (962)
..+.|.+.|+. -.+++++||..+|..+-.+|++ +|-+
T Consensus 145 ~K~~rr~~Ik~----y~I~l~~GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 145 GQNTKSQWLQD----KNIRIFYGDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp TCCCSHHHHHH----TTEEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred CchHHHHHHHH----cCeEEEecCCHHHHhHHHHcCCCceEe
Confidence 11345555543 3589999999999999999986 6665
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=92.20 E-value=0.044 Score=53.34 Aligned_cols=111 Identities=8% Similarity=0.009 Sum_probs=69.3
Q ss_pred CCCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCH
Q 044543 500 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFP 579 (962)
Q Consensus 500 D~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP 579 (962)
.++-||+.+.++.|++.|+++.++|+... +...-+..|+.... + .++.+... ....-.|
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f-~-~i~~~~~~-----------------~~~KP~~ 148 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYF-D-AIADPAEV-----------------AASKPAP 148 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGC-S-EECCTTTS-----------------SSCTTST
T ss_pred ccccCCceeccccccccccceEEEeecch--hhHHHHhhcccccc-c-cccccccc-----------------cccccCh
Confidence 34678999999999999999999999765 46677788875321 1 11111100 0111122
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEccCchHHHHhcccccc
Q 044543 580 EHKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAVADATDAARGASDIVL 633 (962)
Q Consensus 580 ~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIamg~gt~~a~~aaDivl 633 (962)
+-=..+.+.+.-..+.|+||||..+|+.|-++|++ .|+++.+.+ ...++.++
T Consensus 149 ~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~~~--~~~~~~~~ 201 (221)
T d1o08a_ 149 DIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPED--LGDDIVIV 201 (221)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHH--HCSSSEEE
T ss_pred HHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEECChhh--cccccEEc
Confidence 22122333333344568999999999999999987 666665432 33455554
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=92.09 E-value=0.075 Score=51.66 Aligned_cols=125 Identities=9% Similarity=0.039 Sum_probs=76.7
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
.+.+++.+.+++|+ .+..++|+-....+..+-+++|+...... ....+..... ..+.-.|+
T Consensus 85 ~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f~~-~~~~~~~~~~---------------~~~KP~~~ 145 (222)
T d2fdra1 85 KIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYFAP-HIYSAKDLGA---------------DRVKPKPD 145 (222)
T ss_dssp CBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGTTT-CEEEHHHHCT---------------TCCTTSSH
T ss_pred chhhhHHHHhhhcc---ccceeeeecchhhhhhhhcccccccccce-eecccccccc---------------cccccCHH
Confidence 35778888877664 56679999999999999999998643211 1111100000 00111122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEccCch--------HHHHhcccccccCCCchHHHHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAVADAT--------DAARGASDIVLTEPGLSVIVSAVL 646 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIamg~gt--------~~a~~aaDivl~~~~~~~i~~~i~ 646 (962)
.=....+.+.-....++||||..+|+.+=++|++ .|++..+. +....-||+++ +++..+..++.
T Consensus 146 ~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi--~~l~eL~~ll~ 218 (222)
T d2fdra1 146 IFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVI--SRMQDLPAVIA 218 (222)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEE--SCGGGHHHHHH
T ss_pred HHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEE--CCHHHHHHHHH
Confidence 2233444444345679999999999999999997 45553221 22333489999 66777776664
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=91.97 E-value=0.023 Score=57.19 Aligned_cols=35 Identities=11% Similarity=0.177 Sum_probs=29.1
Q ss_pred ccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHh
Q 044543 504 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL 538 (962)
Q Consensus 504 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~ 538 (962)
+++.++|++|+++|++++.+|+....+...+++++
T Consensus 21 ~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 21 PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred ccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 78999999999999999999987766666665544
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=91.28 E-value=0.14 Score=51.20 Aligned_cols=61 Identities=30% Similarity=0.319 Sum_probs=41.1
Q ss_pred HHHHHHHhhCCCEEEEEcCCc-CChhhhhcCCe-eEEccCc--h-HHHHh---cccccccCCCchHHHHHH
Q 044543 583 YEIVRKLQERKHICGMTGDGV-NDAPALKKADI-GIAVADA--T-DAARG---ASDIVLTEPGLSVIVSAV 645 (962)
Q Consensus 583 ~~iV~~lq~~g~~v~miGDG~-ND~~aLk~AdV-GIamg~g--t-~~a~~---aaDivl~~~~~~~i~~~i 645 (962)
....+.+.-....++||||.. ||+.+-++|++ +|.+..| + +.... .+|+++ +++..+.++|
T Consensus 192 ~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii--~~l~eL~~~l 260 (261)
T d1vjra_ 192 DVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVF--KNLGELAKAV 260 (261)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEE--SSHHHHHHHH
T ss_pred HHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEE--CCHHHHHHHh
Confidence 344444443456799999996 69999999998 6776322 2 21222 248988 6788888776
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=90.94 E-value=0.089 Score=50.87 Aligned_cols=108 Identities=10% Similarity=0.045 Sum_probs=69.0
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcC----CCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEe
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITG----DQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAG 576 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTG----D~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~ar 576 (962)
.+++++.+.++.|++.|+++.++|+ .............|+..-. + .++ +... .....
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~f-d-~i~-~s~~----------------~~~~K 157 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHF-D-FLI-ESCQ----------------VGMIK 157 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGC-S-EEE-EHHH----------------HSCCT
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhh-c-eee-ehhh----------------ccCCC
Confidence 3679999999999999999999996 2233444445555553210 0 001 0000 00112
Q ss_pred cCHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEccCchHHHHh
Q 044543 577 VFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAVADATDAARG 627 (962)
Q Consensus 577 vsP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIamg~gt~~a~~ 627 (962)
-.|+--....+.++-....|+||||..+|+.+-++|++ +|.+..+.+...+
T Consensus 158 P~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~~e 209 (222)
T d1cr6a1 158 PEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNTASALRE 209 (222)
T ss_dssp TCHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECCSSSHHHHH
T ss_pred CChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEECCcchHHHH
Confidence 24555556666666566679999999999999999998 6777655554443
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=90.53 E-value=0.065 Score=51.91 Aligned_cols=122 Identities=9% Similarity=0.058 Sum_probs=78.8
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
.+.+++.++++.+++.|+++.++|+-........-+..++.... ..++...... ...-.|+
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~f--d~~~~s~~~~-----------------~~KP~p~ 153 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF--DHLLSVDPVQ-----------------VYKPDNR 153 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEESGGGT-----------------CCTTSHH
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccc--cceeeeeeee-----------------ccccHHH
Confidence 35689999999999999999999999999998888888875321 1111111000 1112233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCee-EEcc---CchHHHHhcccccccCCCchHHHH
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADIG-IAVA---DATDAARGASDIVLTEPGLSVIVS 643 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdVG-Iamg---~gt~~a~~aaDivl~~~~~~~i~~ 643 (962)
-=..+.+.+.-....|+||||..+|+-+-++|++- |.+. ...+-....+|+++ +++..+++
T Consensus 154 ~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i--~~l~el~~ 218 (220)
T d1zrna_ 154 VYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVE 218 (220)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHT
T ss_pred HHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEE--CCHHHHHh
Confidence 33344455544445699999999999999999975 3342 11111233578888 56776654
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.00 E-value=0.048 Score=53.38 Aligned_cols=49 Identities=22% Similarity=0.335 Sum_probs=33.7
Q ss_pred hHHHHHHHHhh-CCCEEEEEcC----CcCChhhhhcCC-eeEEccCchHHHHhccc
Q 044543 581 HKYEIVRKLQE-RKHICGMTGD----GVNDAPALKKAD-IGIAVADATDAARGASD 630 (962)
Q Consensus 581 qK~~iV~~lq~-~g~~v~miGD----G~ND~~aLk~Ad-VGIamg~gt~~a~~aaD 630 (962)
+|..-++.|.+ ...-|+++|| |.||.+||+.|+ .|+++++..+..+ .+|
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~~~~~-~~~ 239 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRR-ICE 239 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHH-HHH
T ss_pred CHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCHHHHHH-HHH
Confidence 45555555544 3467999999 889999999997 6888887666444 444
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=89.55 E-value=0.2 Score=48.74 Aligned_cols=24 Identities=25% Similarity=0.272 Sum_probs=22.6
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcC
Q 044543 502 PRHDSAETIRRALNLGVNVKMITG 525 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTG 525 (962)
+-|++.++|++|+++|+++.++|.
T Consensus 49 l~pgv~e~L~~L~~~G~~l~IvTN 72 (209)
T d2o2xa1 49 LRPQMLPAIATANRAGIPVVVVTN 72 (209)
T ss_dssp BCGGGHHHHHHHHHHTCCEEEEEE
T ss_pred ecccHHHHHHHHHhhCCeEEEecc
Confidence 569999999999999999999995
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=88.85 E-value=0.4 Score=46.68 Aligned_cols=123 Identities=15% Similarity=0.131 Sum_probs=77.4
Q ss_pred CCCccHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEecCHh
Q 044543 501 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGVFPE 580 (962)
Q Consensus 501 ~lr~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arvsP~ 580 (962)
++-+++.+++++|+ |+++.++|..+...+...-+..|+.... ..++.+.... ++.-.|+
T Consensus 93 ~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~f--d~v~~s~~~~-----------------~~KP~p~ 151 (245)
T d1qq5a_ 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF--DAVISVDAKR-----------------VFKPHPD 151 (245)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGGT-----------------CCTTSHH
T ss_pred ccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccccc--cccccccccc-----------------ccCccHH
Confidence 46788999999885 7888999999998888888888875321 1112111111 1111232
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEcc-CchHH-H------------------------Hhcccccc
Q 044543 581 HKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAVA-DATDA-A------------------------RGASDIVL 633 (962)
Q Consensus 581 qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIamg-~gt~~-a------------------------~~aaDivl 633 (962)
-=..+++.+.-....|+||||..+|+.+=++|++ .|.+. .+... . ....|+++
T Consensus 152 ~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i 231 (245)
T d1qq5a_ 152 SYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV 231 (245)
T ss_dssp HHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE
T ss_pred HHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEEE
Confidence 2233444444344459999999999999999986 34442 11110 0 01378888
Q ss_pred cCCCchHHHHHHH
Q 044543 634 TEPGLSVIVSAVL 646 (962)
Q Consensus 634 ~~~~~~~i~~~i~ 646 (962)
+++..++.+|+
T Consensus 232 --~~l~el~~lv~ 242 (245)
T d1qq5a_ 232 --PALGDLPRLVR 242 (245)
T ss_dssp --SSGGGHHHHHH
T ss_pred --CCHHHHHHHHH
Confidence 67888888875
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=85.45 E-value=0.26 Score=49.02 Aligned_cols=43 Identities=12% Similarity=0.061 Sum_probs=30.7
Q ss_pred CCCCCccHHHHHHHHHhCCCcEEEEcCCC---HHHHHHHHHHhCCC
Q 044543 499 FDPPRHDSAETIRRALNLGVNVKMITGDQ---LAIAKETGRRLGMG 541 (962)
Q Consensus 499 ~D~lr~~~~~~I~~l~~aGI~v~miTGD~---~~tA~~ia~~~Gi~ 541 (962)
.+.+=+++.++|+.|+++|++++.+|+.. +....+.-+++|+.
T Consensus 17 ~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~ 62 (250)
T d2c4na1 17 DNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp TTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred CCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccc
Confidence 33444789999999999999999999544 34444444557764
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.17 E-value=0.25 Score=47.20 Aligned_cols=103 Identities=10% Similarity=-0.002 Sum_probs=60.2
Q ss_pred CCccHHHHHHHHHhCCCcEEEEcCCCHHHH----HHHHHHhCCCCCCCCcccccccchhccCCcchHHHHhhhcceEEec
Q 044543 502 PRHDSAETIRRALNLGVNVKMITGDQLAIA----KETGRRLGMGTNMYPSSALLGQIKDANISALPVDELIEKADGFAGV 577 (962)
Q Consensus 502 lr~~~~~~I~~l~~aGI~v~miTGD~~~tA----~~ia~~~Gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~arv 577 (962)
+.+++.+.+++|++.|+++.++|+...... .......++.... ..++..... ....-
T Consensus 100 ~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~f--d~i~~s~~~-----------------~~~KP 160 (225)
T d1zd3a1 100 INRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHF--DFLIESCQV-----------------GMVKP 160 (225)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTS--SEEEEHHHH-----------------TCCTT
T ss_pred CCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhc--cEEEecccc-----------------ccchh
Confidence 578999999999999999999997543222 2222222321100 001100000 01111
Q ss_pred CHhhHHHHHHHHhhCCCEEEEEcCCcCChhhhhcCCe-eEEccCchH
Q 044543 578 FPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADI-GIAVADATD 623 (962)
Q Consensus 578 sP~qK~~iV~~lq~~g~~v~miGDG~ND~~aLk~AdV-GIamg~gt~ 623 (962)
.|+-=..+.+.+.-....++||||...|+.+-++|++ +|.+.++.+
T Consensus 161 ~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~~~ 207 (225)
T d1zd3a1 161 EPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDTDT 207 (225)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSSHHH
T ss_pred HHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEECCcch
Confidence 2333234444554344568899999999999999999 777765544
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=83.17 E-value=0.47 Score=47.04 Aligned_cols=41 Identities=27% Similarity=0.259 Sum_probs=31.1
Q ss_pred HhhHHHHHHHHhhCCCEEEEEcCCcC-ChhhhhcCCe-eEEcc
Q 044543 579 PEHKYEIVRKLQERKHICGMTGDGVN-DAPALKKADI-GIAVA 619 (962)
Q Consensus 579 P~qK~~iV~~lq~~g~~v~miGDG~N-D~~aLk~AdV-GIamg 619 (962)
|+--..+.+.++-....|+||||..+ |+.+-++|++ +|.+.
T Consensus 183 p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~ 225 (253)
T d1wvia_ 183 AVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVT 225 (253)
T ss_dssp HHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEES
T ss_pred cccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEEC
Confidence 44445555666555567999999976 9999999999 77773
|