Citrus Sinensis ID: 044553
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 275 | 2.2.26 [Sep-21-2011] | |||||||
| Q9FZ62 | 279 | Inorganic pyrophosphatase | yes | no | 0.989 | 0.974 | 0.671 | 1e-108 | |
| Q67YC0 | 295 | Inorganic pyrophosphatase | no | no | 0.985 | 0.918 | 0.690 | 1e-108 | |
| Q9SU92 | 245 | Inorganic pyrophosphatase | no | no | 0.865 | 0.971 | 0.577 | 2e-78 | |
| Q6DBV4 | 279 | Probable phosphatase phos | yes | no | 0.832 | 0.820 | 0.366 | 3e-33 | |
| Q66KD6 | 238 | Probable phosphatase phos | yes | no | 0.796 | 0.920 | 0.337 | 5e-28 | |
| Q8R2H9 | 267 | Phosphoethanolamine/phosp | yes | no | 0.829 | 0.853 | 0.307 | 2e-27 | |
| Q8TCT1 | 267 | Phosphoethanolamine/phosp | yes | no | 0.832 | 0.857 | 0.310 | 2e-26 | |
| O73884 | 268 | Phosphoethanolamine/phosp | yes | no | 0.821 | 0.843 | 0.295 | 1e-25 | |
| Q2KI06 | 241 | Pyridoxal phosphate phosp | no | no | 0.723 | 0.825 | 0.316 | 1e-23 | |
| Q8TCD6 | 241 | Pyridoxal phosphate phosp | no | no | 0.818 | 0.933 | 0.311 | 2e-23 |
| >sp|Q9FZ62|PPSP2_ARATH Inorganic pyrophosphatase 2 OS=Arabidopsis thaliana GN=At1g17710 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 392 bits (1006), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/277 (67%), Positives = 227/277 (81%), Gaps = 5/277 (1%)
Query: 2 SGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIE 61
+ IV++FDFDKTIID DSDN+VVDELG TDLFNQLLPTMPWNSLM+RMMKELH GKTIE
Sbjct: 5 NNIVIVFDFDKTIIDVDSDNWVVDELGFTDLFNQLLPTMPWNSLMNRMMKELHDHGKTIE 64
Query: 62 DIVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNP 121
+I +VL+RIPIHPRV+PAIKSAHALGCELRIVSDAN FIETI+EHLGI + FSEINTNP
Sbjct: 65 EIKQVLRRIPIHPRVIPAIKSAHALGCELRIVSDANTLFIETIIEHLGIGEFFSEINTNP 124
Query: 122 GFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGN-KKIIYLGDGS 180
G VDE+GRL + P+HDFTK SHGC+ CPPNMCKG++I+RIQASL+KEG K+IYLGDG+
Sbjct: 125 GLVDEQGRLIVSPYHDFTKSSHGCSRCPPNMCKGLIIDRIQASLTKEGKTSKMIYLGDGA 184
Query: 181 GDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHLVNTIGS 240
GDYCPSL L D++MPRKNFP+WDLI +NPML+KA + +WTDGE++E+IL+ ++N I S
Sbjct: 185 GDYCPSLGLKAEDYMMPRKNFPVWDLISQNPMLVKATVRDWTDGEDMERILMEIINEIMS 244
Query: 241 T--NNNNSAQLLSADCKLQTISAAAHETLPQVLSVTQ 275
+ N L S +CK+ HE + L++ +
Sbjct: 245 SEEGEENDKMLSSENCKISV--GIVHEPIQVPLNLVK 279
|
Catalyzes the specific cleavage of pyrophosphate. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 1EC: .EC: 1 |
| >sp|Q67YC0|PPSP1_ARATH Inorganic pyrophosphatase 1 OS=Arabidopsis thaliana GN=PS2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/281 (69%), Positives = 225/281 (80%), Gaps = 10/281 (3%)
Query: 4 IVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDI 63
IVV+FDFDKTIID DSDN+V+DELG TDLFNQLLPTMPWN+LMDRMMKELH QGKTIE+I
Sbjct: 14 IVVVFDFDKTIIDVDSDNWVIDELGFTDLFNQLLPTMPWNTLMDRMMKELHDQGKTIEEI 73
Query: 64 VEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGF 123
+VL+ IPIHPRVVPAIKSAH LGCELRIVSDAN+FFIETI+EHLGI + FSEIN+NPG+
Sbjct: 74 KQVLRTIPIHPRVVPAIKSAHDLGCELRIVSDANMFFIETIVEHLGISELFSEINSNPGY 133
Query: 124 VDEEGRLRIFPFHDFTKCSHGCN--LCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSG 181
VDE G L+I P+HDFTK H C+ CPPNMCKG++IERIQ SL+KEG KK+IYLGDG+G
Sbjct: 134 VDERGTLKISPYHDFTKSPHSCSCGTCPPNMCKGLIIERIQQSLAKEGKKKMIYLGDGAG 193
Query: 182 DYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHLVNTIGST 241
DYCPSLKL+ D+VMPRKNFP+WDLI +NPMLIKA I EWTDG+ +E IL+
Sbjct: 194 DYCPSLKLNTEDYVMPRKNFPVWDLISQNPMLIKAAIREWTDGQSMEMILIG-TIEEIRL 252
Query: 242 NNNNSAQLLSAD--CKLQTISAAA----HE-TLPQVLSVTQ 275
L SA+ CK+QTIS HE LP+ L V+Q
Sbjct: 253 EEEKEKMLTSAENNCKMQTISIGINNVHHEPILPRALRVSQ 293
|
Catalyzes the specific cleavage of pyrophosphate. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q9SU92|PPSP3_ARATH Inorganic pyrophosphatase 3 OS=Arabidopsis thaliana GN=At4g29530 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 292 bits (747), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 138/239 (57%), Positives = 181/239 (75%), Gaps = 1/239 (0%)
Query: 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTI 60
M+ IV++FDFD+T+ID DSDN+VV E+G T++F+QL T+PWN LMDRMM EL SQG++I
Sbjct: 1 MAKIVILFDFDRTLIDGDSDNWVVTEMGLTEIFHQLRFTLPWNRLMDRMMMELQSQGRSI 60
Query: 61 EDIVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTN 120
+DI LK++PI ++ AIKSA + GC+L+IVSDAN FFIE ILEH + DCFSEI TN
Sbjct: 61 DDIKSCLKKMPIDSHIIEAIKSAKSSGCDLKIVSDANQFFIEKILEHHDLVDCFSEIYTN 120
Query: 121 PGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEG-NKKIIYLGDG 179
P +D+ G LRI P+H H CNLCP N+CKG+V++ ++AS S + ++ IYLGDG
Sbjct: 121 PTSLDDNGNLRILPYHSDALPPHSCNLCPSNLCKGLVMDHLRASSSNDQIPRRFIYLGDG 180
Query: 180 SGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHLVNTI 238
GD+CP+LKL E D VMPR N+PLW I NP+LIKAE+ EW+ EE ++ILL LV+TI
Sbjct: 181 GGDFCPTLKLRECDFVMPRTNYPLWKKISDNPLLIKAEVKEWSSAEEQQRILLQLVSTI 239
|
Catalyzes the specific cleavage of pyrophosphate. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q6DBV4|PHOP1_DANRE Probable phosphatase phospho1 OS=Danio rerio GN=phospho1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 142 bits (357), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 19/248 (7%)
Query: 2 SGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMP---WNSLMDRMMKELHSQGK 58
S ++ FDFD+T++D SD+ +V L L T +N M R++ L QG
Sbjct: 34 SRFLMFFDFDETLVDECSDDSMVSAAPGGVLPGWLKDTYRPGRYNEYMQRVLAYLSEQGV 93
Query: 59 T---IEDIVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFS 115
T I VE L P P ++ + S + E+ VSDAN FIET L+H+G + F
Sbjct: 94 TPAAIRATVEKLPPCPGIPALMHFLLSQPSRDFEVVCVSDANTVFIETWLQHMGFQPLFL 153
Query: 116 EINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGN----K 171
I TNP D+ G L++ PFH SH C CP NMCK VV+ + A +E +
Sbjct: 154 RIFTNPAHFDDNGVLQLRPFH-----SHECLRCPANMCKAVVVRQYVAQRIRERGGRPYQ 208
Query: 172 KIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIR----NPMLIKAEIHEWTDGEEL 227
K++Y+GDG+ D+CPSL LS GD PR++FP+ LI P KA + W GE++
Sbjct: 209 KVLYMGDGANDFCPSLTLSPGDVAFPRRDFPMHKLIQEMGEAKPGEFKASVVPWKSGEDV 268
Query: 228 EQILLHLV 235
L ++
Sbjct: 269 VNTLRKIL 276
|
Probable phosphatase, involved in bone mineralization. Danio rerio (taxid: 7955) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: - |
| >sp|Q66KD6|PHOP2_XENTR Probable phosphatase phospho2 OS=Xenopus tropicalis GN=phospho2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 125 bits (313), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 117/240 (48%), Gaps = 21/240 (8%)
Query: 5 VVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTM---PWNSLMDRMMKELHSQGKTIE 61
+++FDFD TII+ +SD ++V + L N L + W M R+ L QG E
Sbjct: 4 LLVFDFDHTIINDNSDTWIVQCVPGKKLPNGLQNSYEKGKWTEYMGRVFSYLGEQGIREE 63
Query: 62 DIVEVLKRIPIHPRVVPAIKSAHALG-----CELRIVSDANLFFIETILEHLGIRDCFSE 116
D+ ++ IP P + + H +G + I+SD+N FI+ IL H + + F +
Sbjct: 64 DMKRIMIAIPYTPGMTDLL---HFIGQNKDSFDCIIISDSNTIFIDWILTHANVHNVFDK 120
Query: 117 INTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEG--NKKII 174
+ TNP D G L + FH H C CP N+CK V+E A S KI+
Sbjct: 121 VFTNPAAFDSVGNLTVQNFH-----VHHCTTCPTNLCKKKVLEEFVAKQSSNSAHYSKIV 175
Query: 175 YLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHL 234
Y+GDG D CP L +GD MPR + L I ++ L+ + I W+ G E IL HL
Sbjct: 176 YVGDGGNDLCPVTFLKKGDIAMPRAGYTLDKHIAKDVTLVDSTISVWSTGAE---ILSHL 232
|
Probable phosphatase. Xenopus tropicalis (taxid: 8364) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: - |
| >sp|Q8R2H9|PHOP1_MOUSE Phosphoethanolamine/phosphocholine phosphatase OS=Mus musculus GN=Phospho1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 119/244 (48%), Gaps = 16/244 (6%)
Query: 4 IVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMP---WNSLMDRMMKELHSQGKTI 60
++ FDFD+TI+D +SD+ +V L L T +N M R+ K L QG
Sbjct: 27 FLLTFDFDETIVDENSDDSIVRAAPGQQLPESLRATYREGYYNEYMQRVFKYLGEQGVRP 86
Query: 61 EDIVEVLKRIPIHPRVVPAIKSAHALGC--ELRIVSDANLFFIETILEHLGIRDCFSEIN 118
D+ V + IP+ P + ++ G E+ ++SDAN F +E+ L G F I
Sbjct: 87 RDLRAVYETIPLSPGMGDLLQFIAKQGSCFEVILISDANTFGVESALRAAGHHSLFRRIL 146
Query: 119 TNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEG--NKKIIYL 176
+NP D G L + PFH +H C+ CP NMCK V+ +++G +++ Y+
Sbjct: 147 SNPSGPDARGLLTLRPFH-----THSCSRCPANMCKHKVLSEYLRERARDGVHFERLFYV 201
Query: 177 GDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIR----NPMLIKAEIHEWTDGEELEQILL 232
GDG+ D+CP L+ GD PR+ +P+ LI P +A + W ++ Q L
Sbjct: 202 GDGANDFCPMGLLAGGDVAFPRRGYPMHRLIQEAQKAEPSSFRAHVVPWETAADVRQHLQ 261
Query: 233 HLVN 236
++
Sbjct: 262 QVLK 265
|
Phosphatase that has a high activity toward phosphoethanolamine (PEA) and phosphocholine (PCho). Involved in the generation of inorganic phosphate for bone mineralization. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 7 EC: 5 |
| >sp|Q8TCT1|PHOP1_HUMAN Phosphoethanolamine/phosphocholine phosphatase OS=Homo sapiens GN=PHOSPHO1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 118/248 (47%), Gaps = 19/248 (7%)
Query: 4 IVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMP---WNSLMDRMMKELHSQGKTI 60
++ FDFD+TI+D +SD+ +V L L T +N M R+ K L QG
Sbjct: 27 FLLTFDFDETIVDENSDDSIVRAAPGQRLPESLRATYREGFYNEYMQRVFKYLGEQGVRP 86
Query: 61 EDIVEVLKRIPIHPRVVPAIKSAHALGC--ELRIVSDANLFFIETILEHLGIRDCFSEIN 118
D+ + + IP+ P + ++ G E+ ++SDAN F +E+ L G F I
Sbjct: 87 RDLSAIYEAIPLSPGMSDLLQFVAKQGACFEVILISDANTFGVESSLRAAGHHSLFRRIL 146
Query: 119 TNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEG--NKKIIYL 176
+NP D G L + PFH +H C CP NMCK V+ + +G +++ Y+
Sbjct: 147 SNPSGPDARGLLALRPFH-----THSCARCPANMCKHKVLSDYLRERAHDGVHFERLFYV 201
Query: 177 GDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIR----NPMLIKAEIHEWTDGEELEQILL 232
GDG+ D+CP L+ GD PR+ +P+ LI P +A + W E + L
Sbjct: 202 GDGANDFCPMGLLAGGDVAFPRRGYPMHRLIQEAQKAEPSSFRASVVPW---ETAADVRL 258
Query: 233 HLVNTIGS 240
HL + S
Sbjct: 259 HLQQVLKS 266
|
Phosphatase that has a high activity toward phosphoethanolamine (PEA) and phosphocholine (PCho). Involved in the generation of inorganic phosphate for bone mineralization. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 7 EC: 5 |
| >sp|O73884|PHOP1_CHICK Phosphoethanolamine/phosphocholine phosphatase OS=Gallus gallus GN=PHOSPHO1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 117/244 (47%), Gaps = 18/244 (7%)
Query: 5 VVIFDFDKTIIDCDSDNFVVDELGATDL---FNQLLPTMPWNSLMDRMMKELHSQGKTIE 61
+++FDFD TII+ SD+ +V L Q +N M R++ + QG +
Sbjct: 28 LLVFDFDGTIINESSDDSIVRAAPGQALPEHIRQSFREGFYNEYMQRVLAYMGDQGVKMG 87
Query: 62 DIVEVLKRIPIHPR---VVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEIN 118
D V + IP+ P + + H L E+ ++SDAN+F IE L G F +I
Sbjct: 88 DFKAVYENIPLSPGMPDLFQFLSKNHEL-FEIILISDANMFGIECKLRAAGFYSLFRKIF 146
Query: 119 TNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKE--GNKKIIYL 176
+NP D+ G + P+H SH C CP N CK ++ A ++E +++ Y+
Sbjct: 147 SNPSSFDKRGYFTLGPYH-----SHKCLDCPANTCKRKILTEYLAERAQEEVEFERVFYV 201
Query: 177 GDGSGDYCPSLKLSEGDHVMPRKNFPLWDLI----IRNPMLIKAEIHEWTDGEELEQILL 232
GDG+ D+CPS+ L+ D PRK +P+ + + P +A + W E+ + L
Sbjct: 202 GDGANDFCPSVTLTSADVAFPRKGYPMHQMTQEMEKKQPGTFQATVVPWESATEVARYLQ 261
Query: 233 HLVN 236
L+
Sbjct: 262 ELLK 265
|
Phosphatase that has a high activity toward phosphoethanolamine (PEA) and phosphocholine (PCho). Involved in the generation of inorganic phosphate for bone mineralization. Gallus gallus (taxid: 9031) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 7 EC: 5 |
| >sp|Q2KI06|PHOP2_BOVIN Pyridoxal phosphate phosphatase PHOSPHO2 OS=Bos taurus GN=PHOSPHO2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 16/215 (7%)
Query: 4 IVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMP---WNSLMDRMMKELHSQGKTI 60
I+++FDFD TIID +SD ++V L +L + W M R+ K L +G
Sbjct: 3 ILLVFDFDNTIIDDNSDTWIVQCAPEKKLPLELKDSYKKGFWTEFMGRVFKYLGDEGVRE 62
Query: 61 EDIVEVLKRIPIHPRVVPAI----KSAHALGCELRIVSDANLFFIETILEHLGIRDCFSE 116
+++ + +P P +V + K+ + C I+SD+N FI+ +LE D F +
Sbjct: 63 DEMKRAMISMPFTPGMVELLNFIRKNKNKFDC--IIISDSNSVFIDWVLEATNFHDVFDK 120
Query: 117 INTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEG--NKKII 174
+ TNP D G L + H +H C CP N+CK VV+ ++G +I+
Sbjct: 121 VFTNPAAFDSNGHLTVEKHH-----THSCTRCPQNLCKNVVLVEFVGEQLQQGVNYTRIV 175
Query: 175 YLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIR 209
Y+GDG D CP L + D MPRK + L + R
Sbjct: 176 YIGDGGNDVCPVTFLKKNDIAMPRKGYALQKTLYR 210
|
Phosphatase that has high activity toward pyridoxal 5'-phosphate (PLP). Also active at much lower level toward pyrophosphate, phosphoethanolamine (PEA), phosphocholine (PCho), phospho-l-tyrosine, fructose-6-phosphate, p-nitrophenyl phosphate, and h-glycerophosphate. Bos taurus (taxid: 9913) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 7 EC: 4 |
| >sp|Q8TCD6|PHOP2_HUMAN Pyridoxal phosphate phosphatase PHOSPHO2 OS=Homo sapiens GN=PHOSPHO2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 117/244 (47%), Gaps = 19/244 (7%)
Query: 4 IVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMP---WNSLMDRMMKELHSQGKTI 60
I+++FDFD TIID +SD ++V L +L + W M R+ K L +G
Sbjct: 3 ILLVFDFDNTIIDDNSDTWIVQCAPNKKLPIELRDSYRKGFWTEFMGRVFKYLGDKGVRE 62
Query: 61 EDIVEVLKRIPIHPRVVPAI----KSAHALGCELRIVSDANLFFIETILEHLGIRDCFSE 116
++ + +P P +V K+ C I+SD+N FI+ +LE D F +
Sbjct: 63 HEMKRAVTSLPFTPGMVELFNFIRKNKDKFDC--IIISDSNSVFIDWVLEAASFHDIFDK 120
Query: 117 INTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVV-IERIQASLSKEGN-KKII 174
+ TNP + G L + +H +H CN CP N+CK VV IE + L + N +I+
Sbjct: 121 VFTNPAAFNSNGHLTVENYH-----THSCNRCPKNLCKKVVLIEFVDKQLQQGVNYTQIV 175
Query: 175 YLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIR---NPMLIKAEIHEWTDGEELEQIL 231
Y+GDG D CP L D MPRK + L + R N ++ + W+ G ++ L
Sbjct: 176 YIGDGGNDVCPVTFLKNDDVAMPRKGYTLQKTLSRMSQNLEPMEYSVVVWSSGVDIISHL 235
Query: 232 LHLV 235
L+
Sbjct: 236 QFLI 239
|
Phosphatase that has high activity toward pyridoxal 5'-phosphate (PLP). Also active at much lower level toward pyrophosphate, phosphoethanolamine (PEA), phosphocholine (PCho), phospho-l-tyrosine, fructose-6-phosphate, p-nitrophenyl phosphate, and h-glycerophosphate. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 7 EC: 4 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 275 | ||||||
| 224100273 | 277 | predicted protein [Populus trichocarpa] | 0.996 | 0.989 | 0.763 | 1e-126 | |
| 224134528 | 283 | predicted protein [Populus trichocarpa] | 0.974 | 0.946 | 0.776 | 1e-123 | |
| 255572989 | 274 | Phosphoethanolamine/phosphocholine phosp | 0.989 | 0.992 | 0.761 | 1e-122 | |
| 356526041 | 272 | PREDICTED: inorganic pyrophosphatase 2-l | 0.981 | 0.992 | 0.736 | 1e-121 | |
| 359807590 | 272 | uncharacterized protein LOC100785878 [Gl | 0.981 | 0.992 | 0.736 | 1e-121 | |
| 255572987 | 274 | Phosphoethanolamine/phosphocholine phosp | 0.989 | 0.992 | 0.758 | 1e-120 | |
| 225442333 | 273 | PREDICTED: inorganic pyrophosphatase 2 [ | 0.970 | 0.978 | 0.787 | 1e-120 | |
| 356522610 | 272 | PREDICTED: inorganic pyrophosphatase 2-l | 0.981 | 0.992 | 0.736 | 1e-120 | |
| 255637717 | 272 | unknown [Glycine max] | 0.981 | 0.992 | 0.732 | 1e-120 | |
| 449447842 | 273 | PREDICTED: inorganic pyrophosphatase 2-l | 0.952 | 0.959 | 0.777 | 1e-120 |
| >gi|224100273|ref|XP_002311810.1| predicted protein [Populus trichocarpa] gi|222851630|gb|EEE89177.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 210/275 (76%), Positives = 246/275 (89%), Gaps = 1/275 (0%)
Query: 2 SGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIE 61
+ IVV+FDFDKTIID DSDN+V+DELG T+ FNQLLPTM WNSLMDRMMKELH+ GKT+E
Sbjct: 3 AAIVVVFDFDKTIIDVDSDNWVIDELGFTESFNQLLPTMSWNSLMDRMMKELHANGKTME 62
Query: 62 DIVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNP 121
DI EVLKRIPIHP+V+ AIK+AHALGCELRIVSDAN+FFIETIL+HLG++D FSEINTNP
Sbjct: 63 DIAEVLKRIPIHPQVISAIKAAHALGCELRIVSDANMFFIETILKHLGLKDYFSEINTNP 122
Query: 122 GFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSG 181
GFVDEEGRLRI P+HDFT+ SHGC+LCPPNMCKG++IERIQAS+SKEG+KKIIYLGDG+G
Sbjct: 123 GFVDEEGRLRISPYHDFTQSSHGCSLCPPNMCKGLIIERIQASISKEGSKKIIYLGDGAG 182
Query: 182 DYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHLVNTIGST 241
DYCPSLKL+E D++MPRKNFP+WDLI +NP LIKAEIHEW DG E+E++LL ++ I
Sbjct: 183 DYCPSLKLTEADYMMPRKNFPVWDLISKNPKLIKAEIHEWNDGAEMERVLLQIIERISRE 242
Query: 242 N-NNNSAQLLSADCKLQTISAAAHETLPQVLSVTQ 275
N+NSA+L SADCKLQTIS A H+ +PQ LSVTQ
Sbjct: 243 EINSNSAKLFSADCKLQTISIAGHDAMPQALSVTQ 277
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224134528|ref|XP_002327427.1| predicted protein [Populus trichocarpa] gi|222835981|gb|EEE74402.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust.
Identities = 209/269 (77%), Positives = 242/269 (89%), Gaps = 1/269 (0%)
Query: 8 FDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVL 67
FDFDKTIID DSDN+V+DELG TDLFNQLL TMPWNSLMDRMMKE+HS GKTIEDI EVL
Sbjct: 15 FDFDKTIIDVDSDNWVIDELGFTDLFNQLLHTMPWNSLMDRMMKEIHSHGKTIEDIAEVL 74
Query: 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEE 127
+RIPIHP+V+ AIK+AHALGCELRIVSDAN+FFIETIL HLG++D FSEINTNPGFVDE+
Sbjct: 75 RRIPIHPQVISAIKAAHALGCELRIVSDANMFFIETILNHLGLKDYFSEINTNPGFVDEQ 134
Query: 128 GRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSL 187
RLRI P+HDFT+ SH C+LCPPNMCKG++IERIQAS+SK+G+KKIIYLGDG+GDYCPSL
Sbjct: 135 ERLRISPYHDFTQSSHCCSLCPPNMCKGLIIERIQASISKDGSKKIIYLGDGAGDYCPSL 194
Query: 188 KLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHLVNTIGSTN-NNNS 246
KL+E D+VMPRKNFP+WDLI NP+L+KAEIHEW +G ELE++LL ++ I + ++NS
Sbjct: 195 KLTEADYVMPRKNFPVWDLISENPLLVKAEIHEWINGAELERVLLQIIERISTDEISSNS 254
Query: 247 AQLLSADCKLQTISAAAHETLPQVLSVTQ 275
AQLLSADCKLQTIS AAHE LPQ LSVTQ
Sbjct: 255 AQLLSADCKLQTISIAAHEGLPQPLSVTQ 283
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255572989|ref|XP_002527425.1| Phosphoethanolamine/phosphocholine phosphatase, putative [Ricinus communis] gi|223533235|gb|EEF34991.1| Phosphoethanolamine/phosphocholine phosphatase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/277 (76%), Positives = 247/277 (89%), Gaps = 5/277 (1%)
Query: 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTI 60
M+GI+V+FDFDKTI+D DSDN+V+DELG TDLFN+LLPTMPWNSLMDRMMKELHSQGKTI
Sbjct: 1 MAGILVVFDFDKTIVDVDSDNWVIDELGFTDLFNELLPTMPWNSLMDRMMKELHSQGKTI 60
Query: 61 EDIVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTN 120
ED+VEVLKRIPIHPRV+PAIKSAHALGCELRIVSDANLFFIE IL+HLG+RD FSEINTN
Sbjct: 61 EDMVEVLKRIPIHPRVIPAIKSAHALGCELRIVSDANLFFIEAILKHLGLRDYFSEINTN 120
Query: 121 PGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKE-GNKKIIYLGDG 179
PGFVD+EG+LRIFP+HDFT+ SHGC+LCPPNMCKG +IERIQ+S+SKE +KKIIYLGDG
Sbjct: 121 PGFVDDEGKLRIFPYHDFTQSSHGCSLCPPNMCKGHIIERIQSSISKEDKSKKIIYLGDG 180
Query: 180 SGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHLVNTIG 239
+GDYCPSLKL+E D++MPRKNFP+WDLI NPM+IKAEIHEW DGEELE++L+ +++ I
Sbjct: 181 AGDYCPSLKLTEADYLMPRKNFPVWDLICSNPMVIKAEIHEWIDGEELERVLIEIIDGIC 240
Query: 240 STN-NNNSAQLLSADCKLQTISAAAHETLPQVLSVTQ 275
N +S QL S+DCKLQT+ AA LPQ + V Q
Sbjct: 241 LEEINGSSDQLFSSDCKLQTVPIAA---LPQAVPVPQ 274
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356526041|ref|XP_003531628.1| PREDICTED: inorganic pyrophosphatase 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 439 bits (1129), Expect = e-121, Method: Compositional matrix adjust.
Identities = 201/273 (73%), Positives = 241/273 (88%), Gaps = 3/273 (1%)
Query: 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTI 60
MSG V++FDFDKTI+D DSDN+V+DELG TDLFNQLLPTMPWNSLMDRMM ELHS+GKTI
Sbjct: 1 MSGTVIVFDFDKTIVDVDSDNWVIDELGFTDLFNQLLPTMPWNSLMDRMMMELHSKGKTI 60
Query: 61 EDIVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTN 120
EDI EVL RIP+HPRV+PAI++AHA GC+LRIVSDAN+FFIETIL+HLGIR+ FSEINTN
Sbjct: 61 EDIEEVLHRIPLHPRVIPAIQAAHAFGCDLRIVSDANMFFIETILKHLGIREYFSEINTN 120
Query: 121 PGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGS 180
PG+V+EEGRLRI P+HDF K SHGC LCPPNMCKG++I+RIQ S+S+EGNK++IYLGDGS
Sbjct: 121 PGYVNEEGRLRILPYHDFNKASHGCTLCPPNMCKGLIIDRIQDSISQEGNKRMIYLGDGS 180
Query: 181 GDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHLVNTIGS 240
GDYCPSL+L E D++MPRKNFP WDLI ++P+L+KAEIH W+DGEELEQ+LLHL+ I
Sbjct: 181 GDYCPSLRLKERDYMMPRKNFPAWDLICKDPLLVKAEIHGWSDGEELEQVLLHLIAKISM 240
Query: 241 TNNNNSAQLLSADCKLQTISAAAHETLPQVLSV 273
N +Q +S+DCKLQT+S +A E LP+VL V
Sbjct: 241 EEN---SQFISSDCKLQTLSVSALEGLPKVLPV 270
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359807590|ref|NP_001241414.1| uncharacterized protein LOC100785878 [Glycine max] gi|255641141|gb|ACU20848.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 439 bits (1128), Expect = e-121, Method: Compositional matrix adjust.
Identities = 201/273 (73%), Positives = 241/273 (88%), Gaps = 3/273 (1%)
Query: 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTI 60
MSG V++FDFDKTI+D DSDN+V+DELG TDLFNQLLPTMPWNSLMDRMM ELHS GKTI
Sbjct: 1 MSGTVIVFDFDKTIVDVDSDNWVIDELGFTDLFNQLLPTMPWNSLMDRMMMELHSNGKTI 60
Query: 61 EDIVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTN 120
EDI EVL+RIP+HPRV+PA+++AHALGC+LRIVSDAN+FFIETIL+HLGIR+ FSEINTN
Sbjct: 61 EDIEEVLRRIPLHPRVIPALQAAHALGCDLRIVSDANVFFIETILKHLGIREYFSEINTN 120
Query: 121 PGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGS 180
PG+V+EEGRLRI P+HDF K SHGC LCPPNMCKG++I+RIQ S+S+EG K++IYLGDGS
Sbjct: 121 PGYVNEEGRLRILPYHDFNKASHGCTLCPPNMCKGLIIDRIQDSISEEGKKRMIYLGDGS 180
Query: 181 GDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHLVNTIGS 240
GDYCPSL+L E D +MPRKNFP+WDLI ++P+L+KAEIH W+DGEELEQ+LLHL+N I
Sbjct: 181 GDYCPSLRLKERDFMMPRKNFPVWDLICKDPLLVKAEIHGWSDGEELEQVLLHLINKISM 240
Query: 241 TNNNNSAQLLSADCKLQTISAAAHETLPQVLSV 273
N AQ +S+DCKLQT+S +A E LP+ L V
Sbjct: 241 EEN---AQFISSDCKLQTLSVSALEGLPKALPV 270
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255572987|ref|XP_002527424.1| Phosphoethanolamine/phosphocholine phosphatase, putative [Ricinus communis] gi|223533234|gb|EEF34990.1| Phosphoethanolamine/phosphocholine phosphatase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 210/277 (75%), Positives = 246/277 (88%), Gaps = 5/277 (1%)
Query: 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTI 60
M+G++V+FDFD TIID DSDN+V+DELG TDLFNQLLPTMPWNSLMDRMMKELHSQGKTI
Sbjct: 1 MAGVLVVFDFDNTIIDVDSDNWVIDELGFTDLFNQLLPTMPWNSLMDRMMKELHSQGKTI 60
Query: 61 EDIVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTN 120
ED+VEVLKRIPIHPRVV AIKSAHALGCELRIVSDAN+FFIETIL+HLG+RD FSEINTN
Sbjct: 61 EDMVEVLKRIPIHPRVVHAIKSAHALGCELRIVSDANVFFIETILKHLGLRDYFSEINTN 120
Query: 121 PGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKE-GNKKIIYLGDG 179
PGFVD+EG+LRIFP++DFT+ SHGC+LC PNMCKG +IERIQAS+SKE +KKIIYLGDG
Sbjct: 121 PGFVDDEGKLRIFPYYDFTQSSHGCSLCQPNMCKGHIIERIQASMSKEDKSKKIIYLGDG 180
Query: 180 SGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHLVNTIG 239
+GDYCPSLKL+E D++MPRKNFP+WDLI NPM+IKAEIHEWTDGEEL ++L+ +++ I
Sbjct: 181 AGDYCPSLKLTEADYLMPRKNFPVWDLICSNPMVIKAEIHEWTDGEELGRVLIEIIDRIC 240
Query: 240 -STNNNNSAQLLSADCKLQTISAAAHETLPQVLSVTQ 275
N +S QL S+DCKLQT+S AA LPQ + V +
Sbjct: 241 LEERNGSSDQLFSSDCKLQTVSIAA---LPQAVPVPR 274
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225442333|ref|XP_002280889.1| PREDICTED: inorganic pyrophosphatase 2 [Vitis vinifera] gi|297743107|emb|CBI35974.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/277 (78%), Positives = 243/277 (87%), Gaps = 10/277 (3%)
Query: 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTI 60
M+GIVV+FDFDKTIID DSDN+VVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTI
Sbjct: 1 MAGIVVVFDFDKTIIDVDSDNWVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTI 60
Query: 61 EDIVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTN 120
+DI EVLKRIPIHPRVVPAIKSAHALGC+L+IVSDANLFFIETIL+HLG+ DCFSEINTN
Sbjct: 61 DDIAEVLKRIPIHPRVVPAIKSAHALGCDLKIVSDANLFFIETILKHLGVMDCFSEINTN 120
Query: 121 PGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGS 180
P FVDEEGRLRIFP HDFT SHGC+LCPPNMCKG+VI+RIQAS+S E K IYLGDGS
Sbjct: 121 PSFVDEEGRLRIFPHHDFTSSSHGCSLCPPNMCKGMVIKRIQASISTE---KFIYLGDGS 177
Query: 181 GDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHLVNTI-- 238
GD+CPSLKL +GD+VMPRKNFPLWDLI RNP LIKAE+HEW+DGEELE LLHL+ I
Sbjct: 178 GDFCPSLKLGDGDYVMPRKNFPLWDLICRNPNLIKAEVHEWSDGEELEHGLLHLIKKISE 237
Query: 239 --GSTNNNNSAQLLSADCKLQTISAAAHETLPQVLSV 273
+ NN+ +AQL+S DCK +T++A A LPQ L V
Sbjct: 238 ENNANNNSAAAQLISVDCKFETMAAQA---LPQALPV 271
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356522610|ref|XP_003529939.1| PREDICTED: inorganic pyrophosphatase 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 201/273 (73%), Positives = 241/273 (88%), Gaps = 3/273 (1%)
Query: 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTI 60
MSGIVV+FDFDKTI+D DSDN+V+DELG TDLFNQLLPTMPWNSLMD+MM ELHS GKTI
Sbjct: 1 MSGIVVVFDFDKTIVDVDSDNWVIDELGFTDLFNQLLPTMPWNSLMDKMMMELHSNGKTI 60
Query: 61 EDIVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTN 120
EDI EVL RIP+HPRV+PAI++AH LGC+LRIVSDAN+FFIETIL+HLGIR+ FSEI+TN
Sbjct: 61 EDIEEVLHRIPLHPRVIPAIQAAHTLGCDLRIVSDANMFFIETILKHLGIREYFSEISTN 120
Query: 121 PGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGS 180
PG+V+EE RLRI P+HDF K SHGC+LCPPNMCKG++I+RIQ S+ +EG K++IYLGDGS
Sbjct: 121 PGYVNEEERLRILPYHDFNKASHGCSLCPPNMCKGLIIDRIQDSILEEGKKRMIYLGDGS 180
Query: 181 GDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHLVNTIGS 240
GDYCPSL+L E D +MPRKNFP+WDLI ++P+L+KAEIH W+DGEELEQ+LLHL+N I
Sbjct: 181 GDYCPSLRLKERDFMMPRKNFPVWDLICKDPLLVKAEIHGWSDGEELEQVLLHLINKISM 240
Query: 241 TNNNNSAQLLSADCKLQTISAAAHETLPQVLSV 273
N AQ +S+DCKLQT+S +AHE LP+VL V
Sbjct: 241 EEN---AQFISSDCKLQTLSVSAHEDLPKVLPV 270
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255637717|gb|ACU19181.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust.
Identities = 200/273 (73%), Positives = 240/273 (87%), Gaps = 3/273 (1%)
Query: 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTI 60
MSG V++FDFDKTI+D DSDN+V+DELG TDLFNQLLPTMPWNSLMDRMM ELHS GKTI
Sbjct: 1 MSGTVIVFDFDKTIVDVDSDNWVIDELGFTDLFNQLLPTMPWNSLMDRMMMELHSNGKTI 60
Query: 61 EDIVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTN 120
EDI EVL+RIP+HPRV+PA+++AHALGC+LRIVSDAN+FFIETIL+HLGIR+ FSEINTN
Sbjct: 61 EDIEEVLRRIPLHPRVIPALQAAHALGCDLRIVSDANVFFIETILKHLGIREYFSEINTN 120
Query: 121 PGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGS 180
PG+V+EEGRLRI P+HDF K SHGC LCPPNMCKG++I+RIQ S+S+EG K++IYLGDGS
Sbjct: 121 PGYVNEEGRLRILPYHDFNKASHGCTLCPPNMCKGLIIDRIQDSISEEGKKRMIYLGDGS 180
Query: 181 GDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHLVNTIGS 240
GDYCPSL+L E D +M RKNFP+WDLI ++P+L+KAEIH W+DGEELEQ+LLHL+N I
Sbjct: 181 GDYCPSLRLKERDFMMSRKNFPVWDLICKDPLLVKAEIHGWSDGEELEQVLLHLINKISM 240
Query: 241 TNNNNSAQLLSADCKLQTISAAAHETLPQVLSV 273
N AQ +S+DCKLQT+S +A E LP+ L V
Sbjct: 241 EEN---AQFISSDCKLQTLSVSALEGLPKALPV 270
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449447842|ref|XP_004141676.1| PREDICTED: inorganic pyrophosphatase 2-like [Cucumis sativus] gi|449480589|ref|XP_004155938.1| PREDICTED: inorganic pyrophosphatase 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 435 bits (1119), Expect = e-120, Method: Compositional matrix adjust.
Identities = 210/270 (77%), Positives = 234/270 (86%), Gaps = 8/270 (2%)
Query: 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTI 60
M+GIVV+FDFDKTIID DSDN+VVDELGATDLFNQLLPTMPWNSLMDRMM ELH+QGKTI
Sbjct: 1 MAGIVVVFDFDKTIIDLDSDNWVVDELGATDLFNQLLPTMPWNSLMDRMMTELHAQGKTI 60
Query: 61 EDIVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTN 120
+DIVEVLKR PIHP VVPAI++AHALGC+LRIVSDAN+FFIETIL+HLGIR+CFSEINTN
Sbjct: 61 DDIVEVLKRAPIHPDVVPAIRAAHALGCDLRIVSDANMFFIETILDHLGIRECFSEINTN 120
Query: 121 PGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEG-NKKIIYLGDG 179
PG+VDEEGRLRIFP HDF K SHGCNLCPPNMCKG+V+ERIQASL EG KK IYLGDG
Sbjct: 121 PGYVDEEGRLRIFPIHDFQKSSHGCNLCPPNMCKGLVMERIQASLMSEGKKKKFIYLGDG 180
Query: 180 SGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHLVNTIG 239
SGDYCPSLKL EGD +MPRKNFPLWDLI +NP++IKAEIHEW+DGEEL +ILL+L+ TI
Sbjct: 181 SGDYCPSLKLGEGDFLMPRKNFPLWDLISQNPLVIKAEIHEWSDGEELARILLNLIKTIS 240
Query: 240 STNNNNSAQLLSADCKLQTISAAAHETLPQ 269
N AQLLS Q + +E LP
Sbjct: 241 MAEN---AQLLSP----QNMGVPVYEALPS 263
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 275 | ||||||
| TAIR|locus:2032748 | 295 | PS2 "phosphate starvation-indu | 0.992 | 0.925 | 0.689 | 2e-102 | |
| TAIR|locus:2007958 | 279 | PEPC1 "phosphoethanolamine/pho | 0.989 | 0.974 | 0.671 | 8.8e-102 | |
| TAIR|locus:2134353 | 245 | AT4G29530 "AT4G29530" [Arabido | 0.865 | 0.971 | 0.577 | 1.4e-73 | |
| ZFIN|ZDB-GENE-040801-198 | 279 | phospho1 "phosphatase, orphan | 0.814 | 0.802 | 0.383 | 5.2e-33 | |
| UNIPROTKB|Q2KI06 | 241 | PHOSPHO2 "Pyridoxal phosphate | 0.818 | 0.933 | 0.311 | 9.4e-27 | |
| MGI|MGI:2447348 | 267 | Phospho1 "phosphatase, orphan | 0.807 | 0.831 | 0.319 | 9.4e-27 | |
| RGD|1306182 | 289 | Phospho1 "phosphatase, orphan | 0.807 | 0.768 | 0.319 | 9.4e-27 | |
| UNIPROTKB|F1S1V3 | 241 | PHOSPHO2 "Uncharacterized prot | 0.818 | 0.933 | 0.307 | 3.2e-26 | |
| UNIPROTKB|Q8TCT1 | 267 | PHOSPHO1 "Phosphoethanolamine/ | 0.829 | 0.853 | 0.315 | 5.2e-26 | |
| ZFIN|ZDB-GENE-080204-104 | 241 | phospho2 "phosphatase, orphan | 0.821 | 0.937 | 0.301 | 6.6e-26 |
| TAIR|locus:2032748 PS2 "phosphate starvation-induced gene 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1015 (362.4 bits), Expect = 2.0e-102, P = 2.0e-102
Identities = 195/283 (68%), Positives = 228/283 (80%)
Query: 2 SGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIE 61
+ IVV+FDFDKTIID DSDN+V+DELG TDLFNQLLPTMPWN+LMDRMMKELH QGKTIE
Sbjct: 12 NNIVVVFDFDKTIIDVDSDNWVIDELGFTDLFNQLLPTMPWNTLMDRMMKELHDQGKTIE 71
Query: 62 DIVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNP 121
+I +VL+ IPIHPRVVPAIKSAH LGCELRIVSDAN+FFIETI+EHLGI + FSEIN+NP
Sbjct: 72 EIKQVLRTIPIHPRVVPAIKSAHDLGCELRIVSDANMFFIETIVEHLGISELFSEINSNP 131
Query: 122 GFVDEEGRLRIFPFHDFTKCSHGCNL--CPPNMCKGVVIERIQASLSKEGNKKIIYLGDG 179
G+VDE G L+I P+HDFTK H C+ CPPNMCKG++IERIQ SL+KEG KK+IYLGDG
Sbjct: 132 GYVDERGTLKISPYHDFTKSPHSCSCGTCPPNMCKGLIIERIQQSLAKEGKKKMIYLGDG 191
Query: 180 SGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHLVNTIG 239
+GDYCPSLKL+ D+VMPRKNFP+WDLI +NPMLIKA I EWTDG+ +E IL+ + I
Sbjct: 192 AGDYCPSLKLNTEDYVMPRKNFPVWDLISQNPMLIKAAIREWTDGQSMEMILIGTIEEI- 250
Query: 240 STNNNNSAQLLSAD--CKLQTISAAA----HET-LPQVLSVTQ 275
L SA+ CK+QTIS HE LP+ L V+Q
Sbjct: 251 RLEEEKEKMLTSAENNCKMQTISIGINNVHHEPILPRALRVSQ 293
|
|
| TAIR|locus:2007958 PEPC1 "phosphoethanolamine/phosphocholine phosphatase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1009 (360.2 bits), Expect = 8.8e-102, P = 8.8e-102
Identities = 186/277 (67%), Positives = 227/277 (81%)
Query: 2 SGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIE 61
+ IV++FDFDKTIID DSDN+VVDELG TDLFNQLLPTMPWNSLM+RMMKELH GKTIE
Sbjct: 5 NNIVIVFDFDKTIIDVDSDNWVVDELGFTDLFNQLLPTMPWNSLMNRMMKELHDHGKTIE 64
Query: 62 DIVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNP 121
+I +VL+RIPIHPRV+PAIKSAHALGCELRIVSDAN FIETI+EHLGI + FSEINTNP
Sbjct: 65 EIKQVLRRIPIHPRVIPAIKSAHALGCELRIVSDANTLFIETIIEHLGIGEFFSEINTNP 124
Query: 122 GFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGN-KKIIYLGDGS 180
G VDE+GRL + P+HDFTK SHGC+ CPPNMCKG++I+RIQASL+KEG K+IYLGDG+
Sbjct: 125 GLVDEQGRLIVSPYHDFTKSSHGCSRCPPNMCKGLIIDRIQASLTKEGKTSKMIYLGDGA 184
Query: 181 GDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHLVNTIGS 240
GDYCPSL L D++MPRKNFP+WDLI +NPML+KA + +WTDGE++E+IL+ ++N I S
Sbjct: 185 GDYCPSLGLKAEDYMMPRKNFPVWDLISQNPMLVKATVRDWTDGEDMERILMEIINEIMS 244
Query: 241 TNNN--NSAQLLSADCKLQTISAAAHETLPQVLSVTQ 275
+ N L S +CK+ HE + L++ +
Sbjct: 245 SEEGEENDKMLSSENCKISV--GIVHEPIQVPLNLVK 279
|
|
| TAIR|locus:2134353 AT4G29530 "AT4G29530" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 743 (266.6 bits), Expect = 1.4e-73, P = 1.4e-73
Identities = 138/239 (57%), Positives = 181/239 (75%)
Query: 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTI 60
M+ IV++FDFD+T+ID DSDN+VV E+G T++F+QL T+PWN LMDRMM EL SQG++I
Sbjct: 1 MAKIVILFDFDRTLIDGDSDNWVVTEMGLTEIFHQLRFTLPWNRLMDRMMMELQSQGRSI 60
Query: 61 EDIVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTN 120
+DI LK++PI ++ AIKSA + GC+L+IVSDAN FFIE ILEH + DCFSEI TN
Sbjct: 61 DDIKSCLKKMPIDSHIIEAIKSAKSSGCDLKIVSDANQFFIEKILEHHDLVDCFSEIYTN 120
Query: 121 PGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEG-NKKIIYLGDG 179
P +D+ G LRI P+H H CNLCP N+CKG+V++ ++AS S + ++ IYLGDG
Sbjct: 121 PTSLDDNGNLRILPYHSDALPPHSCNLCPSNLCKGLVMDHLRASSSNDQIPRRFIYLGDG 180
Query: 180 SGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHLVNTI 238
GD+CP+LKL E D VMPR N+PLW I NP+LIKAE+ EW+ EE ++ILL LV+TI
Sbjct: 181 GGDFCPTLKLRECDFVMPRTNYPLWKKISDNPLLIKAEVKEWSSAEEQQRILLQLVSTI 239
|
|
| ZFIN|ZDB-GENE-040801-198 phospho1 "phosphatase, orphan 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
Identities = 94/245 (38%), Positives = 129/245 (52%)
Query: 2 SGIVVIFDFDKTIID-CDSDNFVVDELGATDLFNQLLPTM-P--WNSLMDRMMKELHSQG 57
S ++ FDFD+T++D C D+ V G L L T P +N M R++ L QG
Sbjct: 34 SRFLMFFDFDETLVDECSDDSMVSAAPGGV-LPGWLKDTYRPGRYNEYMQRVLAYLSEQG 92
Query: 58 KT---IEDIVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCF 114
T I VE L P P ++ + S + E+ VSDAN FIET L+H+G + F
Sbjct: 93 VTPAAIRATVEKLPPCPGIPALMHFLLSQPSRDFEVVCVSDANTVFIETWLQHMGFQPLF 152
Query: 115 SEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKE-GNK-- 171
I TNP D+ G L++ PFH SH C CP NMCK VV+ + A +E G +
Sbjct: 153 LRIFTNPAHFDDNGVLQLRPFH-----SHECLRCPANMCKAVVVRQYVAQRIRERGGRPY 207
Query: 172 -KIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIR----NPMLIKAEIHEWTDGEE 226
K++Y+GDG+ D+CPSL LS GD PR++FP+ LI P KA + W GE+
Sbjct: 208 QKVLYMGDGANDFCPSLTLSPGDVAFPRRDFPMHKLIQEMGEAKPGEFKASVVPWKSGED 267
Query: 227 LEQIL 231
+ L
Sbjct: 268 VVNTL 272
|
|
| UNIPROTKB|Q2KI06 PHOSPHO2 "Pyridoxal phosphate phosphatase PHOSPHO2" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 76/244 (31%), Positives = 120/244 (49%)
Query: 4 IVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMP---WNSLMDRMMKELHSQGKTI 60
I+++FDFD TIID +SD ++V L +L + W M R+ K L +G
Sbjct: 3 ILLVFDFDNTIIDDNSDTWIVQCAPEKKLPLELKDSYKKGFWTEFMGRVFKYLGDEGVRE 62
Query: 61 EDIVEVLKRIPIHPRVVPAI----KSAHALGCELRIVSDANLFFIETILEHLGIRDCFSE 116
+++ + +P P +V + K+ + C I+SD+N FI+ +LE D F +
Sbjct: 63 DEMKRAMISMPFTPGMVELLNFIRKNKNKFDCI--IISDSNSVFIDWVLEATNFHDVFDK 120
Query: 117 INTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVV-IERIQASLSKEGN-KKII 174
+ TNP D G L + H +H C CP N+CK VV +E + L + N +I+
Sbjct: 121 VFTNPAAFDSNGHLTVEKHH-----THSCTRCPQNLCKNVVLVEFVGEQLQQGVNYTRIV 175
Query: 175 YLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIR---NPMLIKAEIHEWTDGEELEQIL 231
Y+GDG D CP L + D MPRK + L + R N +++ + W+ G E+ L
Sbjct: 176 YIGDGGNDVCPVTFLKKNDIAMPRKGYALQKTLYRMCQNLEPMESSVVSWSSGVEIISYL 235
Query: 232 LHLV 235
L+
Sbjct: 236 QFLI 239
|
|
| MGI|MGI:2447348 Phospho1 "phosphatase, orphan 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 76/238 (31%), Positives = 118/238 (49%)
Query: 5 VVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMP---WNSLMDRMMKELHSQGKTIE 61
++ FDFD+TI+D +SD+ +V L L T +N M R+ K L QG
Sbjct: 28 LLTFDFDETIVDENSDDSIVRAAPGQQLPESLRATYREGYYNEYMQRVFKYLGEQGVRPR 87
Query: 62 DIVEVLKRIPIHPRVVPAIKSAHALG-C-ELRIVSDANLFFIETILEHLGIRDCFSEINT 119
D+ V + IP+ P + ++ G C E+ ++SDAN F +E+ L G F I +
Sbjct: 88 DLRAVYETIPLSPGMGDLLQFIAKQGSCFEVILISDANTFGVESALRAAGHHSLFRRILS 147
Query: 120 NPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGN--KKIIYLG 177
NP D G L + PFH +H C+ CP NMCK V+ +++G +++ Y+G
Sbjct: 148 NPSGPDARGLLTLRPFH-----THSCSRCPANMCKHKVLSEYLRERARDGVHFERLFYVG 202
Query: 178 DGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIR----NPMLIKAEIHEWTDGEELEQIL 231
DG+ D+CP L+ GD PR+ +P+ LI P +A + W ++ Q L
Sbjct: 203 DGANDFCPMGLLAGGDVAFPRRGYPMHRLIQEAQKAEPSSFRAHVVPWETAADVRQHL 260
|
|
| RGD|1306182 Phospho1 "phosphatase, orphan 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 76/238 (31%), Positives = 118/238 (49%)
Query: 5 VVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMP---WNSLMDRMMKELHSQGKTIE 61
++ FDFD+TI+D +SD+ +V L L T +N M R+ K L QG
Sbjct: 50 LLTFDFDETIVDENSDDSIVRAAPGQQLPESLRATYREGYYNEYMQRVFKYLGEQGVRPR 109
Query: 62 DIVEVLKRIPIHPRVVPAIKSAHALG-C-ELRIVSDANLFFIETILEHLGIRDCFSEINT 119
D+ V + IP+ P + ++ G C E+ ++SDAN F +E+ L G F I +
Sbjct: 110 DLRAVYETIPLSPGMGDLLQFIAKQGSCFEVILISDANTFGVESALRAAGHHSLFRRILS 169
Query: 120 NPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGN--KKIIYLG 177
NP D G L + PFH +H C+ CP NMCK V+ +++G +++ Y+G
Sbjct: 170 NPSGPDARGLLTLRPFH-----THSCSRCPANMCKHKVLSEYLRERARDGVHFERLFYVG 224
Query: 178 DGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIR----NPMLIKAEIHEWTDGEELEQIL 231
DG+ D+CP L+ GD PR+ +P+ LI P +A + W ++ Q L
Sbjct: 225 DGANDFCPMGLLAGGDVAFPRRGYPMHRLIQEAQKAEPSSFRAHVVPWETAADVRQHL 282
|
|
| UNIPROTKB|F1S1V3 PHOSPHO2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 75/244 (30%), Positives = 119/244 (48%)
Query: 4 IVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMP---WNSLMDRMMKELHSQGKTI 60
I+++FDFD TIID +SD +++ L +L + W M R+ K L +G
Sbjct: 3 ILLVFDFDNTIIDDNSDTWIIQCAPEKKLPIELRDSYKKGFWTEFMGRVFKYLGDEGVRE 62
Query: 61 EDIVEVLKRIPIHPRVVPAI----KSAHALGCELRIVSDANLFFIETILEHLGIRDCFSE 116
+++ + +P P ++ + K+ C I+SD+N FIE +LE D F E
Sbjct: 63 DEMKRAMMSMPFTPGMLELLNFIRKNKDKFDCI--IISDSNSVFIEWVLEATSFYDVFDE 120
Query: 117 INTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEG-N-KKII 174
+ TNP + G L + +H +H C+ CP N+CK VV+ K+G N I+
Sbjct: 121 VFTNPAAFNSSGHLTVENYH-----AHSCSRCPQNLCKNVVLVEFVGKQLKQGVNYAHIV 175
Query: 175 YLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIR---NPMLIKAEIHEWTDGEELEQIL 231
Y+GDG D CP L + D MPRK + L + R N +++ + W+ G E+ L
Sbjct: 176 YIGDGGNDVCPVTFLKKNDVAMPRKGYTLQKTLSRMSQNLEPMESSVVSWSSGIEIISHL 235
Query: 232 LHLV 235
L+
Sbjct: 236 QFLI 239
|
|
| UNIPROTKB|Q8TCT1 PHOSPHO1 "Phosphoethanolamine/phosphocholine phosphatase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 78/247 (31%), Positives = 119/247 (48%)
Query: 5 VVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMP---WNSLMDRMMKELHSQGKTIE 61
++ FDFD+TI+D +SD+ +V L L T +N M R+ K L QG
Sbjct: 28 LLTFDFDETIVDENSDDSIVRAAPGQRLPESLRATYREGFYNEYMQRVFKYLGEQGVRPR 87
Query: 62 DIVEVLKRIPIHPRVVPAIKSAHALG-C-ELRIVSDANLFFIETILEHLGIRDCFSEINT 119
D+ + + IP+ P + ++ G C E+ ++SDAN F +E+ L G F I +
Sbjct: 88 DLSAIYEAIPLSPGMSDLLQFVAKQGACFEVILISDANTFGVESSLRAAGHHSLFRRILS 147
Query: 120 NPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGN--KKIIYLG 177
NP D G L + PFH +H C CP NMCK V+ + +G +++ Y+G
Sbjct: 148 NPSGPDARGLLALRPFH-----THSCARCPANMCKHKVLSDYLRERAHDGVHFERLFYVG 202
Query: 178 DGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIR----NPMLIKAEIHEWTDGEELEQILLH 233
DG+ D+CP L+ GD PR+ +P+ LI P +A + W E + LH
Sbjct: 203 DGANDFCPMGLLAGGDVAFPRRGYPMHRLIQEAQKAEPSSFRASVVPW---ETAADVRLH 259
Query: 234 LVNTIGS 240
L + S
Sbjct: 260 LQQVLKS 266
|
|
| ZFIN|ZDB-GENE-080204-104 phospho2 "phosphatase, orphan 2" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 73/242 (30%), Positives = 121/242 (50%)
Query: 5 VVIFDFDKTIIDCDSDNFVV---DELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIE 61
+V+FDFD TI+D +SD +V+ + D + W M R++ + Q E
Sbjct: 4 LVVFDFDHTIVDENSDTWVIRCTPDQKLPDWLEKSYQRGRWTEYMGRVLTYIGDQSVRPE 63
Query: 62 DIVEVLKRIPIHPRVVPAIK--SAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINT 119
+ V++ IP + + S + + I+SD+N FI+ L+ G++ ++ +
Sbjct: 64 HMRAVMESIPFTDGMTELLTFISENKKHIDCIIISDSNTLFIDWALQASGLKSAVDDVFS 123
Query: 120 NPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNK--KIIYLG 177
NP +D G + + FH +H C CP N+CK V+ + +K+G + +I Y+G
Sbjct: 124 NPANIDARGYVSVRCFH-----AHACKECPVNLCKRRVLRDFTENRAKDGLRYERICYIG 178
Query: 178 DGSGDYCPSLKLSEGDHVMPRKNFPLWDL----IIRNPMLIKAEIHEWTDGEELEQILLH 233
DG D+CP +L+EGD MPRK F L L I ++A+I WT +E+ Q L
Sbjct: 179 DGGNDFCPVKELTEGDIAMPRKGFTLEKLLRKGISEGSNELRAKIMPWTSAKEILQELRA 238
Query: 234 LV 235
L+
Sbjct: 239 LI 240
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q8R2H9 | PHOP1_MOUSE | 3, ., 1, ., 3, ., 7, 5 | 0.3073 | 0.8290 | 0.8539 | yes | no |
| Q6DBV4 | PHOP1_DANRE | 3, ., 1, ., 3, ., - | 0.3669 | 0.8327 | 0.8207 | yes | no |
| Q9FZ62 | PPSP2_ARATH | 3, ., 6, ., 1, ., 1 | 0.6714 | 0.9890 | 0.9749 | yes | no |
| Q8TCT1 | PHOP1_HUMAN | 3, ., 1, ., 3, ., 7, 5 | 0.3104 | 0.8327 | 0.8576 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 275 | |||
| pfam06888 | 234 | pfam06888, Put_Phosphatase, Putative Phosphatase | 1e-128 | |
| TIGR01489 | 188 | TIGR01489, DKMTPPase-SF, 2,3-diketo-5-methylthio-1 | 2e-62 | |
| TIGR01488 | 177 | TIGR01488, HAD-SF-IB, Haloacid Dehalogenase superf | 7e-25 | |
| COG4359 | 220 | COG4359, COG4359, Uncharacterized conserved protei | 2e-10 | |
| COG0546 | 220 | COG0546, Gph, Predicted phosphatases [General func | 3e-07 | |
| COG0560 | 212 | COG0560, SerB, Phosphoserine phosphatase [Amino ac | 2e-05 | |
| pfam13419 | 176 | pfam13419, HAD_2, Haloacid dehalogenase-like hydro | 2e-05 | |
| COG1011 | 229 | COG1011, COG1011, Predicted hydrolase (HAD superfa | 2e-04 | |
| TIGR01509 | 177 | TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase sup | 6e-04 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 8e-04 | |
| pfam12710 | 122 | pfam12710, HAD, haloacid dehalogenase-like hydrola | 0.001 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 0.001 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 0.001 |
| >gnl|CDD|219218 pfam06888, Put_Phosphatase, Putative Phosphatase | Back alignment and domain information |
|---|
Score = 362 bits (931), Expect = e-128
Identities = 141/239 (58%), Positives = 172/239 (71%), Gaps = 12/239 (5%)
Query: 4 IVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMP---WNSLMDRMMKELHSQGKTI 60
I+V+FDFDKTIID DSDN+VVDEL T LF QL PTMP WN LMDR+MKELH QG +I
Sbjct: 1 ILVVFDFDKTIIDVDSDNWVVDELPTTQLFEQLRPTMPKGFWNELMDRVMKELHDQGVSI 60
Query: 61 EDIVEVLKRIPIHPRVVPAIKSA--HALGCELRIVSDANLFFIETILEHLGIRDCFSEIN 118
DI VL+ IP+ P +V IK + LGC+L I+SDAN FFIETIL G+ D FSEI
Sbjct: 61 ADIKAVLRSIPLVPGMVRLIKFLAKNGLGCDLIIISDANSFFIETILRAAGLHDLFSEIF 120
Query: 119 TNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGN--KKIIYL 176
TNP VD GRL + P+HD H CNLCP NMCKG V++ I AS ++EG +++IY+
Sbjct: 121 TNPASVDARGRLTVLPYHD-----HSCNLCPSNMCKGKVLDEIVASQAREGVRYERVIYV 175
Query: 177 GDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHLV 235
GDG+ D+CPSL+L E D MPRK FPLW LI NP+L+KA + EW+ G ELE+ILL L+
Sbjct: 176 GDGANDFCPSLRLRECDVAMPRKGFPLWKLISENPLLLKASVVEWSSGAELEEILLQLI 234
|
This family contains a number of putative eukaryotic acid phosphatases. Some family members represent the products of the PSI14 phosphatase family in Lycopersicon esculentum (Tomato). Length = 234 |
| >gnl|CDD|213629 TIGR01489, DKMTPPase-SF, 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Score = 194 bits (495), Expect = 2e-62
Identities = 71/200 (35%), Positives = 100/200 (50%), Gaps = 15/200 (7%)
Query: 3 GIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTM---PWNSLMDRMMKELHSQGKT 59
+VV+ DFD TI DSD+++ D+ G + L + MDR MK L G
Sbjct: 1 KVVVVSDFDGTITLNDSDDWITDKFGPPEANRLLDGVLSKTLSIKFMDRRMKGLLPSGLK 60
Query: 60 IEDIVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINT 119
++I+EVLK PI P I G + ++SD N FFI+ +LE +G +D F EI +
Sbjct: 61 EDEILEVLKSAPIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYS 120
Query: 120 NPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDG 179
NP D +GR ++P H HGC CP CKG VI ++ + IIY+GDG
Sbjct: 121 NPASFDNDGRHIVWPHH-----CHGCCSCPCGCCKGKVIHKLSEP----KYQHIIYIGDG 171
Query: 180 SGDYCPSLKLSEGDHVMPRK 199
D CP+ D V ++
Sbjct: 172 VTDVCPAKLS---DVVFAKE 188
|
This phosphatase is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. With the exception of OMNI|NTL01BS01361 from B. subtilis and GP|15024582 from Clostridium acetabutylicum, the members of this group are all eukaryotic, spanning metazoa, plants and fungi. The B. subtilus gene (YkrX, renamed MtnX) is part of an operon for the conversion of methylthioribose (MTR) to methionine. It works with the enolase MtnW, a RuBisCO homolog. The combination of MtnW and MtnX achieves the same overall reaction as the enolase-phosphatase MtnC. The function of MtnX was shown by Ashida, et al. (2003) to be 2,3-diketo-5-methylthio-1-phosphopentane phosphatase, rather than 2,3-diketo-5-methylthio-1-phosphopentane phosphatase as proposed earlier. See the Genome Property for methionine salvage for more details. In eukaryotes, methionine salvage from methylthioadenosine also occurs. It seems reasonable that members of this family in eukaryotes fulfill a similar role as in Bacillus. A more specific, equivalog-level model is TIGR03333. Note that a member of this family from S. cerevisiae is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact [Central intermediary metabolism, Other]. Length = 188 |
| >gnl|CDD|233435 TIGR01488, HAD-SF-IB, Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Score = 97.4 bits (243), Expect = 7e-25
Identities = 50/191 (26%), Positives = 75/191 (39%), Gaps = 20/191 (10%)
Query: 5 VVIFDFDKTIIDCDSDNFVVDELGAT-DLFNQLLPTMP--WNSLMDRMMKELHSQGKTIE 61
+ IFDFD T+ DS ++ +L T D +L P S D + + L ++
Sbjct: 1 LAIFDFDGTLTRQDSLIDLLAKLLGTNDEVIELTRLAPSGRISFEDALGRRLALLHRSRS 60
Query: 62 DIVE---VLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEIN 118
+ V + +++ + P I G + IVS FF+E + E LGI D F
Sbjct: 61 EEVAKEFLARQVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVF---- 116
Query: 119 TNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGD 178
N D+ G L + P CKG V++ + SK KKII +GD
Sbjct: 117 ANRLEFDDNGLLTGPIE---------GQVNPEGECKGKVLKELLE-ESKITLKKIIAVGD 166
Query: 179 GSGDYCPSLKL 189
D
Sbjct: 167 SVNDLPMLKLA 177
|
This model represents a subfamily of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. Subfamily IA, B, C and D are distinguished from the rest of the superfamily by the presence of a variable domain between the first and second conserved catalytic motifs. In subfamilies IA and IB, this domain consists of an alpha-helical bundle. It was necessary to model these two subfamilies separately, breaking them at a an apparent phylogenetic bifurcation, so that the resulting model(s) are not so broadly defined that members of subfamily III (which lack the variable domain) are included. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences [Unknown function, Enzymes of unknown specificity]. Length = 177 |
| >gnl|CDD|226802 COG4359, COG4359, Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Score = 59.0 bits (143), Expect = 2e-10
Identities = 45/207 (21%), Positives = 81/207 (39%), Gaps = 30/207 (14%)
Query: 1 MSGIVVIFDFDKTIIDCDSDNFVVDELG---ATDLFNQLLPTMPWNSLMDR--MMKELHS 55
M V+ DFD TI DS++++ D G L + +L ++ R + S
Sbjct: 1 MKKPVIFSDFDGTITLNDSNDYITDTFGPGEWKALKDGVLS----KTISFRDGFGRMFGS 56
Query: 56 QGKTIEDIVE-VLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCF 114
++E+I+E +LK I I P ++ +VS FI + E + ++
Sbjct: 57 IHSSLEEILEFLLKDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERI 116
Query: 115 S--EINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKK 172
+I +N ++ +G+ I + D ++ H K VI + E N+
Sbjct: 117 YCIDIVSNNDYIHIDGQHSIK-YTDDSQFGH---------DKSSVIHEL-----SEPNES 161
Query: 173 IIYLGDGSGDYCPSLKLSEGDHVMPRK 199
I Y GD D + D + +
Sbjct: 162 IFYCGDSVSDLSAAK---LSDLLFAKD 185
|
Length = 220 |
| >gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 3e-07
Identities = 27/134 (20%), Positives = 54/134 (40%), Gaps = 17/134 (12%)
Query: 1 MSGIVVIFDFDKTIID-----CDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHS 55
M ++FD D T++D + N + ELG L + + + L + + + L
Sbjct: 2 MMIKAILFDLDGTLVDSAEDILRAFNAALAELGLPPLDEEEIRQLIGLGLDELIERLLGE 61
Query: 56 QG--KTIEDIVEVLKRI------PIHPRVVPAIKSA----HALGCELRIVSDANLFFIET 103
E + + + + R+ P +K + G +L IV++ ++
Sbjct: 62 ADEEAAAELVERLREEFLTAYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDI 121
Query: 104 ILEHLGIRDCFSEI 117
+L+ LG+ D F I
Sbjct: 122 LLKALGLADYFDVI 135
|
Length = 220 |
| >gnl|CDD|223634 COG0560, SerB, Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 2e-05
Identities = 34/191 (17%), Positives = 72/191 (37%), Gaps = 25/191 (13%)
Query: 6 VIFDFDKTIIDCDSDNFVVDELGATDLFNQLLP-TMPWNSLMDRMMKELHS--QGKTIED 62
+FD D T+I+ + + + G + + M + ++ + +G +E
Sbjct: 8 AVFDLDGTLINAELIDELARGAGVGEEVLAITERAMRGELDFEESLRLRVALLKGLPVEV 67
Query: 63 IVEVLKR-IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNP 121
+ EV + + + P + + A G ++ I+S F +E I E LGI +
Sbjct: 68 LEEVREEFLRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANE---- 123
Query: 122 GFVDEEGRL--RIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDG 179
++G+L R+ + K + + A L ++ + GD
Sbjct: 124 -LEIDDGKLTGRVVGPICDGE------------GKAKALRELAAEL-GIPLEETVAYGDS 169
Query: 180 SGDYCPSLKLS 190
+ D P L+ +
Sbjct: 170 ANDL-PMLEAA 179
|
Length = 212 |
| >gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 2e-05
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 15/125 (12%)
Query: 6 VIFDFDKTIIDCDS------DNFVVDELG----ATDLFNQLLPTMPWNSLMDRMMKELHS 55
+IFD D T+ID D + + LG A +L + + +++E
Sbjct: 1 IIFDLDGTLIDFDPVIFEALRDLAAERLGLDISAEELREAGGLPF--DEALADLLREHPI 58
Query: 56 QGKTIEDIV---EVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRD 112
I + + + R+ P VV ++ A G +L I+S+ + +E +LE LG+ D
Sbjct: 59 DPDEILEALLEYNLESRLEPFPDVVELLRRLKAKGVKLVILSNGSREAVERLLEKLGLLD 118
Query: 113 CFSEI 117
F +
Sbjct: 119 LFDAV 123
|
Length = 176 |
| >gnl|CDD|223943 COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 2e-04
Identities = 30/139 (21%), Positives = 54/139 (38%), Gaps = 26/139 (18%)
Query: 5 VVIFDFDKTIIDCDSDNFVVD-----ELGATDLFNQLLPTMPWNSLMDR--MMKELHSQG 57
++FD D T++D DS F E+G + +L L R + G
Sbjct: 6 AILFDLDGTLLDFDSAEFRAVLAEFAEIGVPETLEELALLKLIEKLEARFLRGEYTGEYG 65
Query: 58 KTIEDIVEVLKRIPI-----------------HPRVVPAIKSAHALGCELR--IVSDANL 98
T+E ++E+L+R+ P A+++ LG + + I+++
Sbjct: 66 LTLERLLELLERLLGDEDAELVEELLAALAKLLPDYPEALEALKELGKKYKLGILTNGAR 125
Query: 99 FFIETILEHLGIRDCFSEI 117
E L LG+ D F +
Sbjct: 126 PHQERKLRQLGLLDYFDAV 144
|
Length = 229 |
| >gnl|CDD|233443 TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 6e-04
Identities = 23/124 (18%), Positives = 49/124 (39%), Gaps = 17/124 (13%)
Query: 5 VVIFDFDKTIIDCDSD----------NFVVDELGATDLFNQ--LLPTMPWNSL--MDRMM 50
V+FD D ++D V DELG +++ + L M
Sbjct: 1 AVLFDLDGVLVDTAHAIAKLVDRAEFPLVPDELGVSEVGSLELALRRWKAKYGRTMSAED 60
Query: 51 KELHSQGKTIEDIVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGI 110
+L + E + + + + P V +++ A G +L +++++ + ++ LG+
Sbjct: 61 AQLLYKQLFYEALEK--EGLKPLPGVRALLEALRARGKKLALLTNSPRADAK-LVLELGL 117
Query: 111 RDCF 114
R F
Sbjct: 118 RALF 121
|
This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 177 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 38.5 bits (90), Expect = 8e-04
Identities = 20/120 (16%), Positives = 47/120 (39%), Gaps = 12/120 (10%)
Query: 61 EDIVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTN 120
E + ++ + ++P V A+K G +L + ++ + + +LE LG+ D F +
Sbjct: 14 EPGIAEIEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPV--- 70
Query: 121 PGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKG-VVIERIQASLSKEGNKKIIYLGDG 179
+ G +P ++ PN K ++ + +++ +GD
Sbjct: 71 ---ITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPE-----EVLMVGDS 122
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
| >gnl|CDD|221729 pfam12710, HAD, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 38.0 bits (88), Expect = 0.001
Identities = 31/183 (16%), Positives = 52/183 (28%), Gaps = 61/183 (33%)
Query: 6 VIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVE 65
+FD D T+ D D+ L+ + E G E
Sbjct: 1 AVFDLDGTLTDSDTAL----------------------LLLLEALAEDRRLGLLGLSDAE 38
Query: 66 VLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVD 125
L + + IVS + + + + LGI D + + T V
Sbjct: 39 ELLELVV-------------------IVSGSPEPLVRPVAKALGI-DDVNVVGTELENVL 78
Query: 126 EEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCP 185
+GRL + ++ K G ++ +GD D P
Sbjct: 79 VDGRLT------------------GKLDGEGKAAALKRLAQKIGRYPVVAVGDSISD-LP 119
Query: 186 SLK 188
+LK
Sbjct: 120 ALK 122
|
Length = 122 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 0.001
Identities = 42/198 (21%), Positives = 74/198 (37%), Gaps = 55/198 (27%)
Query: 6 VIFDFDKTIIDCDSDNFVVDEL-------------------GATDLFNQLLPTMPWNSLM 46
V+FD D T+I+ + +DE+ G D F SL
Sbjct: 17 VVFDMDSTLINAE----TIDEIAKIAGVEEEVSEITERAMRGELD-FKA--------SLR 63
Query: 47 DRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILE 106
+R+ +G +E + EV + +P+ +K+ G ++ ++S F E + +
Sbjct: 64 ERVAL---LKGLPVELLKEVRENLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKD 120
Query: 107 HLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLS 166
LG+ F+ N E+G+L S KG + + L
Sbjct: 121 KLGLDAAFA--NR---LEVEDGKLTGLVEGPIVDAS----------YKGKTLLIL---LR 162
Query: 167 KEG--NKKIIYLGDGSGD 182
KEG + + +GDG+ D
Sbjct: 163 KEGISPENTVAVGDGAND 180
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 38.4 bits (89), Expect = 0.001
Identities = 24/135 (17%), Positives = 47/135 (34%), Gaps = 29/135 (21%)
Query: 5 VVIFDFDKTIIDCDSDNFVVDELGATDLFNQL---LPTMPWNSLM----DRMMKELHSQG 57
V+FD D T+ D + V + + L + +L + +++ L +
Sbjct: 3 AVVFDLDGTLTD--GEPVVPEAEALLEAAAALGVAIVIAAGENLTKEGREELVRRLLLRA 60
Query: 58 KTIEDIVE--------------------VLKRIPIHPRVVPAIKSAHALGCELRIVSDAN 97
E+++E + P++P A+K G +L I++ N
Sbjct: 61 LAGEELLEELLRAGATVVAVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDN 120
Query: 98 LFFIETILEHLGIRD 112
I LG+ D
Sbjct: 121 RLTANAIARLLGLFD 135
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 275 | |||
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 100.0 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 100.0 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 99.94 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 99.93 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 99.93 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 99.92 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 99.92 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 99.92 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 99.92 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 99.91 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 99.91 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 99.91 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 99.9 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.9 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 99.9 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 99.9 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 99.89 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 99.89 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 99.89 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 99.89 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 99.89 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 99.89 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 99.89 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 99.87 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.87 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 99.87 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 99.87 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 99.87 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 99.86 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.86 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 99.86 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 99.86 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.85 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 99.85 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 99.85 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 99.85 | |
| PLN02940 | 382 | riboflavin kinase | 99.84 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 99.84 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 99.84 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 99.83 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.81 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 99.81 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 99.81 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 99.81 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 99.8 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 99.79 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 99.79 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 99.79 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 99.79 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 99.78 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.78 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.78 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 99.78 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 99.77 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 99.74 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 99.74 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 99.73 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 99.73 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 99.72 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 99.72 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 99.72 | |
| PLN02811 | 220 | hydrolase | 99.71 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 99.7 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 99.69 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 99.69 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 99.65 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 99.65 | |
| PRK06769 | 173 | hypothetical protein; Validated | 99.65 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 99.65 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 99.64 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 99.61 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 99.57 | |
| KOG3085 | 237 | consensus Predicted hydrolase (HAD superfamily) [G | 99.56 | |
| KOG2914 | 222 | consensus Predicted haloacid-halidohydrolase and r | 99.54 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 99.54 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 99.54 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 99.54 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 99.52 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 99.52 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 99.47 | |
| PRK08238 | 479 | hypothetical protein; Validated | 99.45 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 99.44 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.42 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 99.4 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 99.38 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 99.37 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 99.33 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 99.32 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.32 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.31 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.3 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 99.27 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 99.21 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 99.21 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 99.18 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 99.14 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 99.13 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.13 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 99.12 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 99.11 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 99.05 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 99.02 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 99.01 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 99.0 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.99 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.98 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.93 | |
| COG4996 | 164 | Predicted phosphatase [General function prediction | 98.91 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.9 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 98.86 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 98.85 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 98.83 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 98.82 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 98.81 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 98.76 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.75 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.7 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 98.69 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.69 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 98.67 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 98.67 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 98.65 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 98.63 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.62 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 98.61 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.59 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 98.53 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.51 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 98.46 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 98.45 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.43 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.42 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 98.38 | |
| COG4229 | 229 | Predicted enolase-phosphatase [Energy production a | 98.37 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 98.33 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 98.33 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 98.32 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.29 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.25 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 98.24 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 98.23 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 98.21 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.2 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 98.18 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 98.18 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 98.18 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 98.15 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 98.14 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 98.13 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 98.07 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 98.06 | |
| PLN02580 | 384 | trehalose-phosphatase | 98.03 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 98.02 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 98.0 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 98.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 97.99 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.99 | |
| PLN02887 | 580 | hydrolase family protein | 97.98 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 97.97 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 97.97 | |
| KOG3128 | 298 | consensus Uncharacterized conserved protein [Funct | 97.96 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 97.95 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.94 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 97.94 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 97.94 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 97.94 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 97.91 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 97.91 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 97.91 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 97.86 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 97.83 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.82 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 97.8 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 97.79 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.72 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 97.72 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 97.7 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.69 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 97.68 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 97.59 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 97.54 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 97.53 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 97.49 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 97.49 | |
| PF05761 | 448 | 5_nucleotid: 5' nucleotidase family; InterPro: IPR | 97.4 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.13 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 97.12 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 96.99 | |
| PLN02423 | 245 | phosphomannomutase | 96.89 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 96.89 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 96.78 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 96.72 | |
| PLN03017 | 366 | trehalose-phosphatase | 96.61 | |
| PLN02151 | 354 | trehalose-phosphatase | 96.55 | |
| KOG2961 | 190 | consensus Predicted hydrolase (HAD superfamily) [G | 96.35 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 96.33 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 96.32 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 96.32 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 96.31 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 96.16 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 96.15 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 96.13 | |
| KOG2116 | 738 | consensus Protein involved in plasmid maintenance/ | 96.0 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 95.96 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 95.95 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 95.9 | |
| KOG2470 | 510 | consensus Similar to IMP-GMP specific 5'-nucleotid | 95.87 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 95.84 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 95.82 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 95.72 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 95.72 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 95.5 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 95.41 | |
| COG4850 | 373 | Uncharacterized conserved protein [Function unknow | 95.36 | |
| COG4502 | 180 | 5'(3')-deoxyribonucleotidase [Nucleotide transport | 95.33 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 95.03 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 94.98 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 94.78 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 94.52 | |
| PLN02887 | 580 | hydrolase family protein | 94.43 | |
| KOG2630 | 254 | consensus Enolase-phosphatase E-1 [Amino acid tran | 94.36 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 94.19 | |
| KOG3189 | 252 | consensus Phosphomannomutase [Lipid transport and | 94.15 | |
| KOG1618 | 389 | consensus Predicted phosphatase [General function | 94.09 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 94.05 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 93.72 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 93.24 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 92.74 | |
| PLN02423 | 245 | phosphomannomutase | 92.56 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 89.91 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 89.54 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 88.57 | |
| PF06189 | 264 | 5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103 | 87.99 | |
| TIGR01658 | 274 | EYA-cons_domain eyes absent protein conserved doma | 87.69 | |
| KOG0323 | 635 | consensus TFIIF-interacting CTD phosphatases, incl | 87.51 | |
| COG5083 | 580 | SMP2 Uncharacterized protein involved in plasmid m | 86.98 | |
| KOG2134 | 422 | consensus Polynucleotide kinase 3' phosphatase [Re | 85.7 | |
| KOG1605 | 262 | consensus TFIIF-interacting CTD phosphatase, inclu | 85.31 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 85.11 | |
| COG0731 | 296 | Fe-S oxidoreductases [Energy production and conver | 84.24 | |
| COG5663 | 194 | Uncharacterized conserved protein [Function unknow | 84.05 | |
| KOG4549 | 144 | consensus Magnesium-dependent phosphatase [General | 83.2 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 82.35 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 81.09 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 81.08 | |
| COG5610 | 635 | Predicted hydrolase (HAD superfamily) [General fun | 80.56 |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-38 Score=262.35 Aligned_cols=226 Identities=50% Similarity=0.940 Sum_probs=204.9
Q ss_pred EEEEEcCCcccCCccHHHHHHHhCCChH---HHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHHHH
Q 044553 5 VVIFDFDKTIIDCDSDNFVVDELGATDL---FNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAIK 81 (275)
Q Consensus 5 ~viFD~DGTL~d~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~ 81 (275)
+|+||||+||+|.++..++++.++.... .........|.++++.+++.++..+.+.+++.+.++.+++.||+.++++
T Consensus 2 LvvfDFD~TIvd~dsd~~v~~~l~~~~~~~~l~~~~~~~~wt~~m~~vl~~L~~~gvt~~~I~~~l~~ip~~pgm~~~l~ 81 (234)
T PF06888_consen 2 LVVFDFDHTIVDQDSDDWVIELLPPEELPEELRESYPKGGWTEYMDRVLQLLHEQGVTPEDIRDALRSIPIDPGMKELLR 81 (234)
T ss_pred EEEEeCCCCccCCccHHHHHHhcCCcccHHHHHHhccccchHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCccHHHHHH
Confidence 7899999999999999999999987644 3333444569999999999999999999999999999999999999999
Q ss_pred HH--HHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHHH
Q 044553 82 SA--HALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIE 159 (275)
Q Consensus 82 ~L--~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~ 159 (275)
.+ ++.|+.++|+|++...+|+.+|++.|+...|+.|++|...++.+|.+...|++. |.|..|+.++||..+++
T Consensus 82 ~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~-----h~C~~C~~NmCK~~il~ 156 (234)
T PF06888_consen 82 FLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHS-----HGCSLCPPNMCKGKILE 156 (234)
T ss_pred HHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccC-----CCCCcCCCccchHHHHH
Confidence 99 457999999999999999999999999999999999999999999988889885 78999999999999999
Q ss_pred HHHHhhhcC--CCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHHHHHHH
Q 044553 160 RIQASLSKE--GNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHLV 235 (275)
Q Consensus 160 ~~~~~~~~~--~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~l~~~~ 235 (275)
+++...... .+++++|||||.||+|++.+++..|++++|.||++++++++++....|.+++|++..||++.|++++
T Consensus 157 ~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~~l~~~i~~~~~~~~a~v~~W~~g~~i~~~l~~~i 234 (234)
T PF06888_consen 157 RLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPRKGYPLHKLIQKNPGEVKAEVVPWSSGEEILEILLQLI 234 (234)
T ss_pred HHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecCCCChHHHHHhcCCCcceeEEEecCCHHHHHHHHHhhC
Confidence 999874222 2589999999999999999999999999999999999999888788899999999999999998764
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=247.76 Aligned_cols=235 Identities=60% Similarity=1.019 Sum_probs=217.5
Q ss_pred CceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCC---hHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHH
Q 044553 2 SGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMP---WNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVP 78 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e 78 (275)
...+++||||-||+|.++..++.+.++......++..... |.+++.+++++++..+.+.+++.+.++.++..||+.+
T Consensus 12 ~ril~~FDFD~TIid~dSD~wVv~~lp~~~l~~qL~~t~p~~~Wne~M~rv~k~Lheqgv~~~~ik~~~r~iP~~Pgmv~ 91 (256)
T KOG3120|consen 12 PRILLVFDFDRTIIDQDSDNWVVDELPTTDLFNQLRDTYPKGFWNELMDRVFKELHEQGVRIAEIKQVLRSIPIVPGMVR 91 (256)
T ss_pred CcEEEEEecCceeecCCcchHHHHhcccchhHHHHHHhcccchHHHHHHHHHHHHHHcCCCHHHHHHHHhcCCCCccHHH
Confidence 4678999999999999999999999999877766666555 9999999999999999999999999999999999999
Q ss_pred HHHHHHHcCC-cEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHH
Q 044553 79 AIKSAHALGC-ELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVV 157 (275)
Q Consensus 79 ~L~~L~~~g~-~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~ 157 (275)
+++.+++.|. .+.|||..+..+|+.+|+++|+.+.|+.|++|+..+++.|.+...|++. +|.|..||.++||..+
T Consensus 92 lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~----~hsC~~CPsNmCKg~V 167 (256)
T KOG3120|consen 92 LIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHT----QHSCNLCPSNMCKGLV 167 (256)
T ss_pred HHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCC----CCccCcCchhhhhhHH
Confidence 9999999984 9999999999999999999999999999999999999999999999884 7999999999999999
Q ss_pred HHHHHHhhhcC--CCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHHHHHHH
Q 044553 158 IERIQASLSKE--GNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHLV 235 (275)
Q Consensus 158 l~~~~~~~~~~--~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~l~~~~ 235 (275)
+.++....... .+++++|||||.||+|+...++..+++++|.||++|+++..++....|.+.+|++..|+..+|..++
T Consensus 168 l~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl~k~~~~~p~~~kasV~~W~sg~d~~~~L~~li 247 (256)
T KOG3120|consen 168 LDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPLWKLISANPMLLKASVLEWSSGEDLERILQQLI 247 (256)
T ss_pred HHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCchHhhhhcCcceeeeeEEecccHHHHHHHHHHHH
Confidence 99998765322 2579999999999999999999999999999999999999899889999999999999999999999
Q ss_pred HHhcc
Q 044553 236 NTIGS 240 (275)
Q Consensus 236 ~~~~~ 240 (275)
..+-+
T Consensus 248 k~~~~ 252 (256)
T KOG3120|consen 248 KTIQV 252 (256)
T ss_pred HHhhh
Confidence 88876
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.6e-26 Score=190.43 Aligned_cols=212 Identities=20% Similarity=0.260 Sum_probs=151.1
Q ss_pred CCceEEEEEcCCcccCCccHHHHHHHhCCChHH---Hhhc-CCCChHHHHHHHHHHHHhCCCCHHHHHHH-HhcCCCCCC
Q 044553 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDLF---NQLL-PTMPWNSLMDRMMKELHSQGKTIEDIVEV-LKRIPIHPR 75 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pg 75 (275)
|++++|+|||||||+++++...+++.++.+.+. ..+. +...+.+.++.++..+.. ...+++.+. .....++||
T Consensus 1 ~~~~~vifDfDgTi~~~d~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~l~pG 78 (219)
T PRK09552 1 MMSIQIFCDFDGTITNNDNIIAIMKKFAPPEWEELKDDILSQELSIQEGVGQMFQLLPS--NLKEEIIQFLLETAEIREG 78 (219)
T ss_pred CCCcEEEEcCCCCCCcchhhHHHHHHhCHHHHHHHHHHHHhCCcCHHHHHHHHHHhCCC--CchHHHHHHHHhCCCcCcC
Confidence 788899999999999999977667777653221 1222 345677888888777542 223555554 457899999
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchH
Q 044553 76 VVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKG 155 (275)
Q Consensus 76 ~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~ 155 (275)
+.++|++|+++|++++|+||+...+++.+++++ +.. +.+++++..++.++....||+|...+ +.. .++.+|.
T Consensus 79 ~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~--~~i~~n~~~~~~~~~~~~kp~p~~~~----~~~-~~~~~K~ 150 (219)
T PRK09552 79 FHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK--EQIYCNGSDFSGEYITITWPHPCDEH----CQN-HCGCCKP 150 (219)
T ss_pred HHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc--CcEEEeEEEecCCeeEEeccCCcccc----ccc-cCCCchH
Confidence 999999999999999999999999999999998 653 45777766555444445577764100 000 1356799
Q ss_pred HHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHHHHHHH
Q 044553 156 VVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHLV 235 (275)
Q Consensus 156 ~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~l~~~~ 235 (275)
.+++.+... +++|+|||||.+|+++|+.+ ++++++. .+.+. ++..+.+ +++|++|.|+...|+++.
T Consensus 151 ~~l~~~~~~-----~~~~i~iGDs~~Di~aa~~A---g~~~a~~--~l~~~-~~~~~~~---~~~~~~f~ei~~~l~~~~ 216 (219)
T PRK09552 151 SLIRKLSDT-----NDFHIVIGDSITDLEAAKQA---DKVFARD--FLITK-CEELGIP---YTPFETFHDVQTELKHLL 216 (219)
T ss_pred HHHHHhccC-----CCCEEEEeCCHHHHHHHHHC---CcceeHH--HHHHH-HHHcCCC---ccccCCHHHHHHHHHHHh
Confidence 888877543 46899999999999999664 5566654 22222 2233333 668999999999998876
Q ss_pred H
Q 044553 236 N 236 (275)
Q Consensus 236 ~ 236 (275)
+
T Consensus 217 ~ 217 (219)
T PRK09552 217 E 217 (219)
T ss_pred c
Confidence 5
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-24 Score=176.96 Aligned_cols=184 Identities=39% Similarity=0.694 Sum_probs=142.7
Q ss_pred eEEEEEcCCcccCCccHHHHHHHhCCChH---HHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHHH
Q 044553 4 IVVIFDFDKTIIDCDSDNFVVDELGATDL---FNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAI 80 (275)
Q Consensus 4 ~~viFD~DGTL~d~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L 80 (275)
-+|+|||||||++.++...+++.++.+.+ .........+......+...+...+.+.+++.+.....+++||+.++|
T Consensus 2 ~~iiFD~dgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~ll 81 (188)
T TIGR01489 2 VVVVSDFDGTITLNDSDDWITDKFGPPEANRLLDGVLSKTLSIKFMDRRMKGLLPSGLKEDEILEVLKSAPIDPGFKEFI 81 (188)
T ss_pred eEEEEeCCCcccCCCchHHHHHhcCcchhhHHHHHHhhcCCchHHHHHHHHHHhhcCCCHHHHHHHHHhCCCCccHHHHH
Confidence 57999999999999998888888874322 222222222333333333333344566777888888899999999999
Q ss_pred HHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHHHH
Q 044553 81 KSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIER 160 (275)
Q Consensus 81 ~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~ 160 (275)
+.|+++|++++|+||+....++.+++++|+..+|+.|++++..++.+|.....|.. .+.|..++.+.+|..++++
T Consensus 82 ~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~-----~~~~~~~~~g~~K~~~~~~ 156 (188)
T TIGR01489 82 AFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHH-----CHGCCSCPCGCCKGKVIHK 156 (188)
T ss_pred HHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCC-----CCccCcCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999988888877776543 1223335677889999999
Q ss_pred HHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 161 IQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 161 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
++.++ +++++|||||.+|+++|+. ++++|+|+
T Consensus 157 ~~~~~----~~~~i~iGD~~~D~~aa~~---~d~~~ar~ 188 (188)
T TIGR01489 157 LSEPK----YQHIIYIGDGVTDVCPAKL---SDVVFAKE 188 (188)
T ss_pred HHhhc----CceEEEECCCcchhchHhc---CCccccCC
Confidence 98763 4799999999999999955 58888863
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.9e-25 Score=169.95 Aligned_cols=209 Identities=24% Similarity=0.371 Sum_probs=165.0
Q ss_pred CCceEEEEEcCCcccCCccHHHHHHHhCCChHH---HhhcC-CCChHHHHHHHHHHHHhCCCCHHHHHHH-HhcCCCCCC
Q 044553 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDLF---NQLLP-TMPWNSLMDRMMKELHSQGKTIEDIVEV-LKRIPIHPR 75 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pg 75 (275)
|.+-.|+.|||||++-.++...+.+.+|.+.+. ...+. ..++++.+.+|+..++ .+.+++.+. ...+.+.||
T Consensus 1 mkk~vi~sDFDGTITl~Ds~~~itdtf~~~e~k~l~~~vls~tiS~rd~~g~mf~~i~---~s~~Eile~llk~i~Idp~ 77 (220)
T COG4359 1 MKKPVIFSDFDGTITLNDSNDYITDTFGPGEWKALKDGVLSKTISFRDGFGRMFGSIH---SSLEEILEFLLKDIKIDPG 77 (220)
T ss_pred CCceEEEecCCCceEecchhHHHHhccCchHHHHHHHHHhhCceeHHHHHHHHHHhcC---CCHHHHHHHHHhhcccCcc
Confidence 556667789999999999999999999998664 33443 5677888888888774 355665554 456999999
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCc--ceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCc
Q 044553 76 VVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCF--SEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMC 153 (275)
Q Consensus 76 ~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~f--d~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~ 153 (275)
+++++++.++++++++|+|+|+..++..++++++=.+.. -.|+++..++..+|.+..+ +++ ..+ .+.+
T Consensus 78 fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~-~~~--ds~-------fG~d 147 (220)
T COG4359 78 FKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIK-YTD--DSQ-------FGHD 147 (220)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeee-cCC--ccc-------cCCC
Confidence 999999999999999999999999999999998622221 2688888888888877665 222 223 3456
Q ss_pred hHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHH--hhCCCceeEEEeeCCChHHHHHHH
Q 044553 154 KGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLI--IRNPMLIKAEIHEWTDGEELEQIL 231 (275)
Q Consensus 154 K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~el~~~l 231 (275)
|...+..+.+. ++.++|+|||.+|+.|| ...+++|++. +|+ |+..+.+ +++|++|.|++..+
T Consensus 148 K~~vI~~l~e~-----~e~~fy~GDsvsDlsaa---klsDllFAK~-----~L~nyc~eqn~~---f~~fe~F~eIlk~i 211 (220)
T COG4359 148 KSSVIHELSEP-----NESIFYCGDSVSDLSAA---KLSDLLFAKD-----DLLNYCREQNLN---FLEFETFYEILKEI 211 (220)
T ss_pred cchhHHHhhcC-----CceEEEecCCcccccHh---hhhhhHhhHH-----HHHHHHHHcCCC---CcccccHHHHHHHH
Confidence 99999998764 57899999999999999 5589999987 566 5555555 66899999999999
Q ss_pred HHHHHHh
Q 044553 232 LHLVNTI 238 (275)
Q Consensus 232 ~~~~~~~ 238 (275)
++++...
T Consensus 212 ekvl~~~ 218 (220)
T COG4359 212 EKVLEVQ 218 (220)
T ss_pred HHHHhhh
Confidence 9988643
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.2e-25 Score=183.31 Aligned_cols=199 Identities=18% Similarity=0.219 Sum_probs=136.0
Q ss_pred CCceEEEEEcCCcccCCcc-----HHHHHHHhCCCh-HHHhhcC--CCChHHHHHHHHHHHHhCC--CCH----HHHHHH
Q 044553 1 MSGIVVIFDFDKTIIDCDS-----DNFVVDELGATD-LFNQLLP--TMPWNSLMDRMMKELHSQG--KTI----EDIVEV 66 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~ 66 (275)
|++++|+||+||||+|+.. ++.+++.+|.+. ....... +......+.+......... ... +.+.+.
T Consensus 2 ~~~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (220)
T COG0546 2 MMIKAILFDLDGTLVDSAEDILRAFNAALAELGLPPLDEEEIRQLIGLGLDELIERLLGEADEEAAAELVERLREEFLTA 81 (220)
T ss_pred CCCCEEEEeCCCccccChHHHHHHHHHHHHHcCCCCCCHHHHHHHhcCCHHHHHHHHhccccchhHHHHHHHHHHHHHHH
Confidence 5689999999999999965 367888888873 2222111 1222323332221100000 000 111122
Q ss_pred H-hc--CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCC
Q 044553 67 L-KR--IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSH 143 (275)
Q Consensus 67 ~-~~--~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~ 143 (275)
. +. ..++||+.++|++|+++|++++|+||++...++.+++++|+.++|+.+++.+... ..||+|
T Consensus 82 ~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~------~~KP~P------- 148 (220)
T COG0546 82 YAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVP------PPKPDP------- 148 (220)
T ss_pred HHhhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCC------CCCcCH-------
Confidence 2 22 4799999999999999999999999999999999999999999999999844432 457766
Q ss_pred CCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCch-hhHHHhhCCCceeEEEeeCC
Q 044553 144 GCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFP-LWDLIIRNPMLIKAEIHEWT 222 (275)
Q Consensus 144 ~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~ 222 (275)
..+..++..++.. +++++||||+.+|+.+|+++|. ..+.+.+|+. ...+....+ .+.++
T Consensus 149 ------------~~l~~~~~~~~~~-~~~~l~VGDs~~Di~aA~~Ag~-~~v~v~~g~~~~~~l~~~~~------d~vi~ 208 (220)
T COG0546 149 ------------EPLLLLLEKLGLD-PEEALMVGDSLNDILAAKAAGV-PAVGVTWGYNSREELAQAGA------DVVID 208 (220)
T ss_pred ------------HHHHHHHHHhCCC-hhheEEECCCHHHHHHHHHcCC-CEEEEECCCCCCcchhhcCC------CEEEC
Confidence 5666777777766 5799999999999999999995 4444455542 222222222 34789
Q ss_pred ChHHHHHHHH
Q 044553 223 DGEELEQILL 232 (275)
Q Consensus 223 ~~~el~~~l~ 232 (275)
++.||..++.
T Consensus 209 ~~~el~~~l~ 218 (220)
T COG0546 209 SLAELLALLA 218 (220)
T ss_pred CHHHHHHHHh
Confidence 9999998775
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.92 E-value=3e-24 Score=178.85 Aligned_cols=207 Identities=20% Similarity=0.241 Sum_probs=149.6
Q ss_pred EEEEcCCcccCCccHHHHHHHhCCChHH---HhhcC-CCChHHHHHHHHHHHHhCCCCHHHHHHHH-hcCCCCCCHHHHH
Q 044553 6 VIFDFDKTIIDCDSDNFVVDELGATDLF---NQLLP-TMPWNSLMDRMMKELHSQGKTIEDIVEVL-KRIPIHPRVVPAI 80 (275)
Q Consensus 6 viFD~DGTL~d~~~~~~~~~~~g~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pg~~e~L 80 (275)
|+|||||||++.++...+++.++.+.+. ..+.. ..++.+.++.++..+.... .+++.+++ ....++||+.++|
T Consensus 2 ~~fDFDgTit~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~e~~~~~~~~~~~~~--~~~~~~~~~~~~~l~pg~~e~l 79 (214)
T TIGR03333 2 IICDFDGTITNNDNIISIMKQFAPPEWEALKDGVLSKTLSIQEGVGRMFGLLPSSL--KEEITSFVLETAEIREGFREFV 79 (214)
T ss_pred EEeccCCCCCcchhHHHHHHHhCcHHHHHHHHHHHcCCccHHHHHHHHHhhCCCch--HHHHHHHHHhcCcccccHHHHH
Confidence 7999999999999988888887654332 23333 4567888877776653221 34555543 4689999999999
Q ss_pred HHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHHHH
Q 044553 81 KSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIER 160 (275)
Q Consensus 81 ~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~ 160 (275)
++|+++|++++|+|++...+++.+++.++.. +.+++++..++.++....+|+|. .+.|.. .|+.||..++++
T Consensus 80 ~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~---~~i~~n~~~~~~~~~~~~~p~~~----~~~~~~-~cg~~K~~~l~~ 151 (214)
T TIGR03333 80 AFINEHGIPFYVISGGMDFFVYPLLEGIVEK---DRIYCNEADFSNEYIHIDWPHPC----DGTCQN-QCGCCKPSLIRK 151 (214)
T ss_pred HHHHHCCCeEEEECCCcHHHHHHHHHhhCCc---ccEEeceeEeeCCeeEEeCCCCC----cccccc-CCCCCHHHHHHH
Confidence 9999999999999999999999999987542 56778777665444444467664 121111 236789999998
Q ss_pred HHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHHHHHHHH
Q 044553 161 IQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHLVN 236 (275)
Q Consensus 161 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~l~~~~~ 236 (275)
+... +++++|||||.+|+++|.. +++++++. . +... ++..+.+ +.+|++|.|+...|+++.+
T Consensus 152 ~~~~-----~~~~i~iGDg~~D~~~a~~---Ad~~~ar~-~-l~~~-~~~~~~~---~~~~~~f~di~~~l~~~~~ 213 (214)
T TIGR03333 152 LSEP-----NDYHIVIGDSVTDVEAAKQ---SDLCFARD-Y-LLNE-CEELGLN---HAPFQDFYDVRKELENVKE 213 (214)
T ss_pred Hhhc-----CCcEEEEeCCHHHHHHHHh---CCeeEehH-H-HHHH-HHHcCCC---ccCcCCHHHHHHHHHHHhc
Confidence 8753 4689999999999999854 67788876 2 2122 3333333 5689999999999986653
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.3e-24 Score=176.85 Aligned_cols=195 Identities=15% Similarity=0.110 Sum_probs=135.4
Q ss_pred ceEEEEEcCCcccCCcc-----HHHHHHHhCCChHHHhh---cCCCChHHHHHHHHHHHHhCCCCH---HH----HHHH-
Q 044553 3 GIVVIFDFDKTIIDCDS-----DNFVVDELGATDLFNQL---LPTMPWNSLMDRMMKELHSQGKTI---ED----IVEV- 66 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~- 66 (275)
+++|+||+||||+|+.. +..+++++|.+....+. ..+....+.++.++... +.+. ++ +.+.
T Consensus 1 ~k~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 77 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGLVYRALRQAVTAAGLSPTPEEVQSAWMGQSKIEAIRALLALD---GADEAEAQAAFADFEERL 77 (220)
T ss_pred CcEEEEecCCCeeccCchHHHHHHHHHHHcCCCCCHHHHHHhhcCCCHHHHHHHHHhcc---CCCHHHHHHHHHHHHHHH
Confidence 47899999999999965 35677778875332222 22333444444443321 2221 11 1111
Q ss_pred ---H--hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc--CCcceEecCCCccCCCCceeecccCCCC
Q 044553 67 ---L--KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR--DCFSEINTNPGFVDEEGRLRIFPFHDFT 139 (275)
Q Consensus 67 ---~--~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~--~~fd~i~~~~~~~~~~g~~~~kp~~~~~ 139 (275)
. ....++||+.++|++|+++|++++|+||+....++.+++++|+. .+|+.+++++... ..||.|
T Consensus 78 ~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~------~~KP~p--- 148 (220)
T TIGR03351 78 AEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVA------AGRPAP--- 148 (220)
T ss_pred HHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCC------CCCCCH---
Confidence 1 13579999999999999999999999999999999999999998 9999999876532 346644
Q ss_pred CCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCC-eEeecCCchhhHHHhhCCCceeEEE
Q 044553 140 KCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGD-HVMPRKNFPLWDLIIRNPMLIKAEI 218 (275)
Q Consensus 140 ~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~ 218 (275)
+++..++.+++..++++|+||||+.+|+.+|+++|+.. +++..+......+.+..+ .
T Consensus 149 ----------------~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~------~ 206 (220)
T TIGR03351 149 ----------------DLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPH------T 206 (220)
T ss_pred ----------------HHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCC------c
Confidence 67778888776653589999999999999999999987 555443333333322222 2
Q ss_pred eeCCChHHHHHHH
Q 044553 219 HEWTDGEELEQIL 231 (275)
Q Consensus 219 ~~~~~~~el~~~l 231 (275)
+.++++.+|...+
T Consensus 207 ~~i~~~~~l~~~~ 219 (220)
T TIGR03351 207 HVLDSVADLPALL 219 (220)
T ss_pred eeecCHHHHHHhh
Confidence 3578888887653
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.3e-24 Score=179.48 Aligned_cols=195 Identities=15% Similarity=0.104 Sum_probs=133.5
Q ss_pred CCceEEEEEcCCcccCCcc-----HHHHHHHhCCCh-HHHhhc--CCCChHHHHHHHHHHHHhCCCCHHH----HHH---
Q 044553 1 MSGIVVIFDFDKTIIDCDS-----DNFVVDELGATD-LFNQLL--PTMPWNSLMDRMMKELHSQGKTIED----IVE--- 65 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--- 65 (275)
|++++|+||+||||+|+.. +..++++++... ...... .+.+....+.. +.. ...+. +..
T Consensus 1 m~~~~viFD~DGTL~ds~~~~~~a~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~----~~~--~~~~~~~~~~~~~~~ 74 (214)
T PRK13288 1 MKINTVLFDLDGTLINTNELIISSFLHTLKTYYPNQYKREDVLPFIGPSLHDTFSK----IDE--SKVEEMITTYREFNH 74 (214)
T ss_pred CCccEEEEeCCCcCccCHHHHHHHHHHHHHHhCCCCCCHHHHHHHhCcCHHHHHHh----cCH--HHHHHHHHHHHHHHH
Confidence 7889999999999999965 355677776532 111111 12222222221 110 01111 111
Q ss_pred --HHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCC
Q 044553 66 --VLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSH 143 (275)
Q Consensus 66 --~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~ 143 (275)
......++||+.++|++|+++|++++|+||+....+..+++.+|+..+|+.+++.+... ..||.|
T Consensus 75 ~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~------~~Kp~p------- 141 (214)
T PRK13288 75 EHHDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVE------HAKPDP------- 141 (214)
T ss_pred HhhhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCC------CCCCCc-------
Confidence 12346799999999999999999999999999999999999999999999999876532 345544
Q ss_pred CCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCC
Q 044553 144 GCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTD 223 (275)
Q Consensus 144 ~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 223 (275)
+.+++++.+++.. +++++||||+.+|+.+|+++|...+++..+..+..++...++ ...+++
T Consensus 142 ------------~~~~~~~~~~~~~-~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~------~~~i~~ 202 (214)
T PRK13288 142 ------------EPVLKALELLGAK-PEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKP------DFMLDK 202 (214)
T ss_pred ------------HHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCc------CEEECC
Confidence 6777788777654 589999999999999999998866655443233333332222 225789
Q ss_pred hHHHHHHHHH
Q 044553 224 GEELEQILLH 233 (275)
Q Consensus 224 ~~el~~~l~~ 233 (275)
+.|+.+++.+
T Consensus 203 ~~~l~~~i~~ 212 (214)
T PRK13288 203 MSDLLAIVGD 212 (214)
T ss_pred HHHHHHHHhh
Confidence 9999887754
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.6e-23 Score=178.95 Aligned_cols=207 Identities=12% Similarity=0.036 Sum_probs=136.8
Q ss_pred CC-ceEEEEEcCCcccCCcc------HHHHHHHhCCChHHHhhcC--CCChHHHHHHH---------HHHHHhCCCCHHH
Q 044553 1 MS-GIVVIFDFDKTIIDCDS------DNFVVDELGATDLFNQLLP--TMPWNSLMDRM---------MKELHSQGKTIED 62 (275)
Q Consensus 1 m~-~~~viFD~DGTL~d~~~------~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~---------~~~~~~~~~~~~~ 62 (275)
|+ +++|+||+||||+|+.. +..+++.+|.+........ +......++.+ +....+...+.++
T Consensus 1 ~~~~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 80 (267)
T PRK13478 1 MMKIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVEITLEEARGPMGLGKWDHIRALLKMPRVAARWQAVFGRLPTEAD 80 (267)
T ss_pred CCceEEEEEcCCCCeecCCCccHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHhcHHHHHHHHHHhCCCCCHHH
Confidence 44 69999999999999853 2456677787532222211 11222212211 1111111112221
Q ss_pred H-------HHH-----HhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCc-ceEecCCCccCCCCc
Q 044553 63 I-------VEV-----LKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCF-SEINTNPGFVDEEGR 129 (275)
Q Consensus 63 ~-------~~~-----~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~f-d~i~~~~~~~~~~g~ 129 (275)
+ ... .....++||+.++|+.|+++|++++|+||++...+..+++.+++..+| +.|++++...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~----- 155 (267)
T PRK13478 81 VDALYAAFEPLQIAKLADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVP----- 155 (267)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCC-----
Confidence 1 111 234789999999999999999999999999999999999999988875 8888776532
Q ss_pred eeecccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCch-------
Q 044553 130 LRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFP------- 202 (275)
Q Consensus 130 ~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~------- 202 (275)
..||+| ..+..++.+++..++++|+|||||.+|+.+|+++|...+.+..+...
T Consensus 156 -~~KP~p-------------------~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~ 215 (267)
T PRK13478 156 -AGRPYP-------------------WMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEE 215 (267)
T ss_pred -CCCCCh-------------------HHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHH
Confidence 347755 56777777777644589999999999999999999876666544321
Q ss_pred ----------------hhHHHhhCCCceeEEEeeCCChHHHHHHHHHHHHHh
Q 044553 203 ----------------LWDLIIRNPMLIKAEIHEWTDGEELEQILLHLVNTI 238 (275)
Q Consensus 203 ----------------~~~l~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~~ 238 (275)
...+.... + .+.++++.||.+++..+..+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~l~~~~-----a-~~vi~~~~~l~~~l~~~~~~~ 261 (267)
T PRK13478 216 YQALSAAELAARRERARARLRAAG-----A-HYVIDTIADLPAVIADIEARL 261 (267)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHcC-----C-CeehhhHHHHHHHHHHHHHHH
Confidence 11222222 1 346899999998887665443
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.4e-23 Score=176.16 Aligned_cols=171 Identities=13% Similarity=0.017 Sum_probs=117.7
Q ss_pred ceEEEEEcCCcccCCcc------HHHHHHHhCCChHHHhhcC--CCChHHHHHH----------HHHHHHhCCCCHHH--
Q 044553 3 GIVVIFDFDKTIIDCDS------DNFVVDELGATDLFNQLLP--TMPWNSLMDR----------MMKELHSQGKTIED-- 62 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~------~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~----------~~~~~~~~~~~~~~-- 62 (275)
+++|+|||||||+|+.. +..+++++|.+........ +......+.. +...+ +...+.++
T Consensus 2 ~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 80 (253)
T TIGR01422 2 IEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFGVQITLEEARGPMGLGKWDHIRALLKMPAVAERWRAKF-GRLPTEADIE 80 (253)
T ss_pred ceEEEEeCCCCeecCCCccHHHHHHHHHHHcCCCccHHHHHHhcCccHHHHHHHHhcCHHHHHHHHHHh-CCCCCHHHHH
Confidence 57999999999999853 2446667776532222221 1111111111 11111 11112211
Q ss_pred -----HHH-----HHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCc-ceEecCCCccCCCCcee
Q 044553 63 -----IVE-----VLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCF-SEINTNPGFVDEEGRLR 131 (275)
Q Consensus 63 -----~~~-----~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~f-d~i~~~~~~~~~~g~~~ 131 (275)
+.. ......++||+.++|+.|+++|++++|+||++...++.+++++|+..+| +.|++++... .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~------~ 154 (253)
T TIGR01422 81 AIYEAFEPLQLAKLAEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVP------A 154 (253)
T ss_pred HHHHHHHHHHHHHHHhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCC------C
Confidence 111 1234789999999999999999999999999999999999999999986 8888876532 3
Q ss_pred ecccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 132 IFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 132 ~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
.||.| +.+...+.+++...+++|+|||||.+|+.+|+++|...+++..+
T Consensus 155 ~KP~p-------------------~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g 203 (253)
T TIGR01422 155 GRPAP-------------------WMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGLILS 203 (253)
T ss_pred CCCCH-------------------HHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEEecC
Confidence 47755 56667777776533589999999999999999999877766543
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.9e-23 Score=177.79 Aligned_cols=194 Identities=14% Similarity=0.083 Sum_probs=131.3
Q ss_pred CceEEEEEcCCcccCCcc-----HHHHHHHhCCC----hHH---HhhcCCCChHHHHHHHHHHHHhCCCC-HHH----HH
Q 044553 2 SGIVVIFDFDKTIIDCDS-----DNFVVDELGAT----DLF---NQLLPTMPWNSLMDRMMKELHSQGKT-IED----IV 64 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~ 64 (275)
++++|+|||||||+|+.. +..+++++|.+ ... .....+.........++......... .+. +.
T Consensus 21 ~~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 100 (248)
T PLN02770 21 PLEAVLFDVDGTLCDSDPLHYYAFREMLQEINFNGGVPITEEFFVENIAGKHNEDIALGLFPDDLERGLKFTDDKEALFR 100 (248)
T ss_pred ccCEEEEcCCCccCcCHHHHHHHHHHHHHHhccccCCCCCHHHHHHHcCCCCHHHHHHHHcCcchhhHHHHHHHHHHHHH
Confidence 368999999999999965 46677787642 111 11222333443333322110000000 011 12
Q ss_pred HHH-hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCC
Q 044553 65 EVL-KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSH 143 (275)
Q Consensus 65 ~~~-~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~ 143 (275)
... ....++||+.++|++|+++|++++|+||+....++..++++|+.++|+.|++++... ..||+|
T Consensus 101 ~~~~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~------~~KP~p------- 167 (248)
T PLN02770 101 KLASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECE------HAKPHP------- 167 (248)
T ss_pred HHHHhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCC------CCCCCh-------
Confidence 222 358899999999999999999999999999999999999999999999999887642 357766
Q ss_pred CCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCC
Q 044553 144 GCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTD 223 (275)
Q Consensus 144 ~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 223 (275)
+.+...+.+++.. |++|+||||+.+|+.+|+++|...+++.. +++...+....+ ...+++
T Consensus 168 ------------~~~~~a~~~~~~~-~~~~l~vgDs~~Di~aA~~aGi~~i~v~~-g~~~~~l~~~~a------~~vi~~ 227 (248)
T PLN02770 168 ------------DPYLKALEVLKVS-KDHTFVFEDSVSGIKAGVAAGMPVVGLTT-RNPESLLMEAKP------TFLIKD 227 (248)
T ss_pred ------------HHHHHHHHHhCCC-hhHEEEEcCCHHHHHHHHHCCCEEEEEeC-CCCHHHHhhcCC------CEEecc
Confidence 5566677776654 58999999999999999999987666644 444333432222 235688
Q ss_pred hHHHH
Q 044553 224 GEELE 228 (275)
Q Consensus 224 ~~el~ 228 (275)
+.|+.
T Consensus 228 ~~e~~ 232 (248)
T PLN02770 228 YEDPK 232 (248)
T ss_pred chhhH
Confidence 88733
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.5e-23 Score=176.83 Aligned_cols=199 Identities=12% Similarity=0.131 Sum_probs=140.9
Q ss_pred ceEEEEEcCCcccCCcc------HHHHHHHhCCChHHHh---hcCCCChHHHHHHHHHHHHhCCCCH---HHH----HHH
Q 044553 3 GIVVIFDFDKTIIDCDS------DNFVVDELGATDLFNQ---LLPTMPWNSLMDRMMKELHSQGKTI---EDI----VEV 66 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~------~~~~~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~ 66 (275)
.++|||||||||+|+.. +..+++++|++....+ ...+......++.++. ...+. +++ ...
T Consensus 24 ~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~~~~~e~~~~~~G~~~~~~~~~l~~----~~~~~~~~~~l~~~~~~~ 99 (260)
T PLN03243 24 WLGVVLEWEGVIVEDDSELERKAWRALAEEEGKRPPPAFLLKRAEGMKNEQAISEVLC----WSRDFLQMKRLAIRKEDL 99 (260)
T ss_pred ceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHhc----cCCCHHHHHHHHHHHHHH
Confidence 68999999999999952 2567778887632221 1223344444433321 11111 111 111
Q ss_pred H-----hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCC
Q 044553 67 L-----KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKC 141 (275)
Q Consensus 67 ~-----~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~ 141 (275)
. ....++||+.++|+.|+++|++++|+||++...++.+++++|+..+|+.|++++... ..||+|
T Consensus 100 ~~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~------~~KP~P----- 168 (260)
T PLN03243 100 YEYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVY------RGKPDP----- 168 (260)
T ss_pred HHHHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCC------CCCCCH-----
Confidence 1 246789999999999999999999999999999999999999999999999876532 357765
Q ss_pred CCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeC
Q 044553 142 SHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEW 221 (275)
Q Consensus 142 ~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 221 (275)
.++..++.+++.. +++|+|||||.+|+.+|+++|+..+++. +..+...+ . .+ ...+
T Consensus 169 --------------e~~~~a~~~l~~~-p~~~l~IgDs~~Di~aA~~aG~~~i~v~-g~~~~~~l-~------~a-d~vi 224 (260)
T PLN03243 169 --------------EMFMYAAERLGFI-PERCIVFGNSNSSVEAAHDGCMKCVAVA-GKHPVYEL-S------AG-DLVV 224 (260)
T ss_pred --------------HHHHHHHHHhCCC-hHHeEEEcCCHHHHHHHHHcCCEEEEEe-cCCchhhh-c------cC-CEEe
Confidence 5677777777665 5899999999999999999999776664 32222221 1 12 2368
Q ss_pred CChHHHHHHHHHHHHHhcc
Q 044553 222 TDGEELEQILLHLVNTIGS 240 (275)
Q Consensus 222 ~~~~el~~~l~~~~~~~~~ 240 (275)
++++||..+....+.....
T Consensus 225 ~~~~el~~~~~~~~~~~~~ 243 (260)
T PLN03243 225 RRLDDLSVVDLKNLSDLDS 243 (260)
T ss_pred CCHHHHHHHHHhhhhccCC
Confidence 9999999888877776654
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.7e-22 Score=169.43 Aligned_cols=207 Identities=18% Similarity=0.246 Sum_probs=138.3
Q ss_pred CCceEEEEEcCCcccCCccHHHHHHHhCCChHHH----hhcC-CCChHHHHHHHHHHHHhCCCCHHHHHHHHhc--CCCC
Q 044553 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDLFN----QLLP-TMPWNSLMDRMMKELHSQGKTIEDIVEVLKR--IPIH 73 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 73 (275)
|.+|+|+|||||||+++++...+++.+|.+.... .+.. ...+.+.+...+.... ...+.+.+.+.. ..++
T Consensus 10 ~~~k~viFDfDGTL~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~ 86 (224)
T PLN02954 10 RSADAVCFDVDSTVCVDEGIDELAEFCGAGEAVAEWTAKAMGGSVPFEEALAARLSLFK---PSLSQVEEFLEKRPPRLS 86 (224)
T ss_pred ccCCEEEEeCCCcccchHHHHHHHHHcCChHHHHHHHHHHHCCCCCHHHHHHHHHHHcC---CCHHHHHHHHHHccCCCC
Confidence 4579999999999999999999999999863332 2222 3455555555444432 345555555543 5689
Q ss_pred CCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCc
Q 044553 74 PRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMC 153 (275)
Q Consensus 74 pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~ 153 (275)
||+.++|++|+++|++++|+|++....++.+++.+|+... .++++...++.+|...+.+..+ + . ..+.+
T Consensus 87 pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~--~~~~~~~~~~~~g~~~g~~~~~----~----~-~~~~~ 155 (224)
T PLN02954 87 PGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPE--NIFANQILFGDSGEYAGFDENE----P----T-SRSGG 155 (224)
T ss_pred ccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChh--hEEEeEEEEcCCCcEECccCCC----c----c-cCCcc
Confidence 9999999999999999999999999999999999999631 2333322233334333322110 0 0 11245
Q ss_pred hHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHHH
Q 044553 154 KGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQIL 231 (275)
Q Consensus 154 K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~l 231 (275)
|..+++.++..++ .++++|||||.+|+.+++. +..+++++.+++...+.....+ ...++++.+|.+++
T Consensus 156 K~~~i~~~~~~~~---~~~~i~iGDs~~Di~aa~~-~~~~~~~~~~~~~~~~~~~~~~------~~~i~~~~el~~~~ 223 (224)
T PLN02954 156 KAEAVQHIKKKHG---YKTMVMIGDGATDLEARKP-GGADLFIGYGGVQVREAVAAKA------DWFVTDFQDLIEVL 223 (224)
T ss_pred HHHHHHHHHHHcC---CCceEEEeCCHHHHHhhhc-CCCCEEEecCCCccCHHHHhcC------CEEECCHHHHHHhh
Confidence 8899999887764 3689999999999999766 4456666554432223222222 22578898887654
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.3e-23 Score=173.67 Aligned_cols=196 Identities=14% Similarity=0.120 Sum_probs=131.3
Q ss_pred CceEEEEEcCCcccCCcc-----HHHHHHHhCCChHHHhhcC---CCChHHHHHHHHHHHHhCCCCHHH----HHHH---
Q 044553 2 SGIVVIFDFDKTIIDCDS-----DNFVVDELGATDLFNQLLP---TMPWNSLMDRMMKELHSQGKTIED----IVEV--- 66 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--- 66 (275)
++++|+|||||||+|+.. +..+++++|.+....+... +......+........ ....++ +.+.
T Consensus 11 ~~k~viFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 88 (229)
T PRK13226 11 FPRAVLFDLDGTLLDSAPDMLATVNAMLAARGRAPITLAQLRPVVSKGARAMLAVAFPELD--AAARDALIPEFLQRYEA 88 (229)
T ss_pred cCCEEEEcCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhhhHHHHHHHHHhccCC--hHHHHHHHHHHHHHHHH
Confidence 358999999999999964 4667888887532211111 1112222221111000 000111 2211
Q ss_pred --HhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCC
Q 044553 67 --LKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHG 144 (275)
Q Consensus 67 --~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~ 144 (275)
.....++||+.++|++|+++|++++|+||+....++..++++|+..+|+.+++++... ..||+|
T Consensus 89 ~~~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~------~~KP~p-------- 154 (229)
T PRK13226 89 LIGTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLA------ERKPHP-------- 154 (229)
T ss_pred hhhhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCC------CCCCCH--------
Confidence 1347899999999999999999999999999999999999999999999888766421 457755
Q ss_pred CCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchh-hHHHhhCCCceeEEEeeCCC
Q 044553 145 CNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPL-WDLIIRNPMLIKAEIHEWTD 223 (275)
Q Consensus 145 ~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~ 223 (275)
+.+..++.+++.. |++|+||||+.+|+.+|+++|...+++..+.... ..+...++ ...+++
T Consensus 155 -----------~~~~~~~~~l~~~-p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~------~~~i~~ 216 (229)
T PRK13226 155 -----------LPLLVAAERIGVA-PTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQA------DVLVEQ 216 (229)
T ss_pred -----------HHHHHHHHHhCCC-hhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCC------CeeeCC
Confidence 5677777777665 5899999999999999999998776664332111 11222222 236789
Q ss_pred hHHHHHHH
Q 044553 224 GEELEQIL 231 (275)
Q Consensus 224 ~~el~~~l 231 (275)
+.||.+.+
T Consensus 217 ~~el~~~~ 224 (229)
T PRK13226 217 PQLLWNPA 224 (229)
T ss_pred HHHHHHHh
Confidence 99988765
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.4e-23 Score=176.33 Aligned_cols=194 Identities=18% Similarity=0.213 Sum_probs=134.2
Q ss_pred ceEEEEEcCCcccCCcc-----HHHHHHHhCCChHHH----hhcCCCChHHHHHHHHHHHHhCCCCHHH--------HHH
Q 044553 3 GIVVIFDFDKTIIDCDS-----DNFVVDELGATDLFN----QLLPTMPWNSLMDRMMKELHSQGKTIED--------IVE 65 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 65 (275)
+++++||+||||+|+.. +..+++++|.+.... ...+ .....++ +.+.......++ +..
T Consensus 62 ~k~vIFDlDGTLiDS~~~~~~a~~~~~~~~G~~~~~~~~~~~~~g-~~~~~i~----~~~~~~~~~~~~~~~~~~~~~~~ 136 (273)
T PRK13225 62 LQAIIFDFDGTLVDSLPTVVAIANAHAPDFGYDPIDERDYAQLRQ-WSSRTIV----RRAGLSPWQQARLLQRVQRQLGD 136 (273)
T ss_pred cCEEEECCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhC-ccHHHHH----HHcCCCHHHHHHHHHHHHHHHHh
Confidence 57899999999999964 366778888752211 1111 1122222 211100001111 112
Q ss_pred HHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCC
Q 044553 66 VLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGC 145 (275)
Q Consensus 66 ~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~ 145 (275)
....++++||+.++|+.|+++|++++|+||+....++.+++++|+.++|+.+++.+.. +
T Consensus 137 ~~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~---------~------------ 195 (273)
T PRK13225 137 CLPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPI---------L------------ 195 (273)
T ss_pred hcccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCC---------C------------
Confidence 2345789999999999999999999999999999999999999999999988765431 0
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChH
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGE 225 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 225 (275)
.|...+..++.+++.. +++|+||||+.+|+.+|+++|+..+.+..+..+..++.+..+ .+.++++.
T Consensus 196 -------~k~~~~~~~l~~~~~~-p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~a------d~~i~~~~ 261 (273)
T PRK13225 196 -------SKRRALSQLVAREGWQ-PAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACP------DWLLETPS 261 (273)
T ss_pred -------CCHHHHHHHHHHhCcC-hhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCC------CEEECCHH
Confidence 1346677777776654 589999999999999999999876666544333344443332 23689999
Q ss_pred HHHHHHHHHHH
Q 044553 226 ELEQILLHLVN 236 (275)
Q Consensus 226 el~~~l~~~~~ 236 (275)
+|..++.++++
T Consensus 262 eL~~~~~~~~~ 272 (273)
T PRK13225 262 DLLQAVTQLMR 272 (273)
T ss_pred HHHHHHHHHhc
Confidence 99999887764
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.2e-22 Score=168.67 Aligned_cols=198 Identities=14% Similarity=0.141 Sum_probs=131.2
Q ss_pred CCceEEEEEcCCcccCCccH---HHHHHHhCCChHH---Hhh--cC----------CCChHHHHHHHHHHH-HhCCCCHH
Q 044553 1 MSGIVVIFDFDKTIIDCDSD---NFVVDELGATDLF---NQL--LP----------TMPWNSLMDRMMKEL-HSQGKTIE 61 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~---~~~~~~~g~~~~~---~~~--~~----------~~~~~~~~~~~~~~~-~~~~~~~~ 61 (275)
|++++|+||+||||+|.+.. ..+++.+|.+... ... .. ...........+... ...+.+.+
T Consensus 1 m~~k~iiFDlDGTLid~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (224)
T PRK09449 1 MKYDWILFDADETLFHFDAFAGLQRMFSRYGVDFTAEDFQDYQAVNKPLWVDYQNGAITALQLQHTRFESWAEKLNVTPG 80 (224)
T ss_pred CCccEEEEcCCCchhcchhhHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCCHH
Confidence 77899999999999986542 4456667764211 111 10 011111111001111 11122222
Q ss_pred HHH----H-HHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccC
Q 044553 62 DIV----E-VLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFH 136 (275)
Q Consensus 62 ~~~----~-~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~ 136 (275)
++. + +.....++||+.++|+.|+ +|++++|+||+....++..++++|+.++|+.+++++... ..||+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~------~~KP~p 153 (224)
T PRK09449 81 ELNSAFLNAMAEICTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVG------VAKPDV 153 (224)
T ss_pred HHHHHHHHHHhhcCccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccC------CCCCCH
Confidence 222 2 2234789999999999999 589999999999999999999999999999998876532 346655
Q ss_pred CCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCC-CCcccccccCCCCeEeecCCchhhHHHhhCCCcee
Q 044553 137 DFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIK 215 (275)
Q Consensus 137 ~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 215 (275)
.+++.++.+++..++++|+||||+. +|+.+|+++|+..+++.+++... . ....
T Consensus 154 -------------------~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~--~-----~~~~ 207 (224)
T PRK09449 154 -------------------AIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQ--P-----EGIA 207 (224)
T ss_pred -------------------HHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCC--C-----CCCC
Confidence 6777888877654457899999998 69999999999877776544311 0 0011
Q ss_pred EEEeeCCChHHHHHHHH
Q 044553 216 AEIHEWTDGEELEQILL 232 (275)
Q Consensus 216 ~~~~~~~~~~el~~~l~ 232 (275)
+ ...++++.||.++++
T Consensus 208 ~-~~~i~~~~el~~~l~ 223 (224)
T PRK09449 208 P-TYQVSSLSELEQLLC 223 (224)
T ss_pred C-eEEECCHHHHHHHHh
Confidence 2 346899999988765
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.1e-23 Score=169.83 Aligned_cols=190 Identities=15% Similarity=0.151 Sum_probs=128.2
Q ss_pred EEEEcCCcccCCcc-----HHHHHHH-hCCChH-HHhh--cCCCChHHHHHHHHHHHHhCCCC-H----HHHHHHHhcCC
Q 044553 6 VIFDFDKTIIDCDS-----DNFVVDE-LGATDL-FNQL--LPTMPWNSLMDRMMKELHSQGKT-I----EDIVEVLKRIP 71 (275)
Q Consensus 6 viFD~DGTL~d~~~-----~~~~~~~-~g~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~ 71 (275)
|+|||||||+|+.. ++.++++ +|.+.. .... ..+..+...++. +. .... . .+.......+.
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~ 75 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIAYREVVGDGPAPFEEYRRHLGRYFPDIMRI----MG-LPLEMEEPFVRESYRLAGEVE 75 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHhCccHHHHHHH----cC-CCHHHHHHHHHHHHHhhcccc
Confidence 68999999999965 3555555 365321 1111 112222322221 11 0000 1 11112234688
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCC
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPN 151 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~ 151 (275)
++||+.++|++|+++|++++|+||+....++..++++|+..+|+.+++.+... ..||.|
T Consensus 76 ~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~------~~KP~~--------------- 134 (205)
T TIGR01454 76 VFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVP------RPKPAP--------------- 134 (205)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCC------CCCCCh---------------
Confidence 99999999999999999999999999999999999999999999998876431 346644
Q ss_pred CchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHHH
Q 044553 152 MCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQIL 231 (275)
Q Consensus 152 ~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~l 231 (275)
..+..++..++.. +++|+||||+.+|+.+|+++|...+.+..+.....++....+ ...++++.+|..++
T Consensus 135 ----~~~~~~~~~~~~~-~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~------~~~~~~~~~l~~~~ 203 (205)
T TIGR01454 135 ----DIVREALRLLDVP-PEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARP------DFLLRKPQSLLALC 203 (205)
T ss_pred ----HHHHHHHHHcCCC-hhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCC------CeeeCCHHHHHHHh
Confidence 6777777777655 589999999999999999999876655433223334433322 22579999998766
Q ss_pred H
Q 044553 232 L 232 (275)
Q Consensus 232 ~ 232 (275)
+
T Consensus 204 ~ 204 (205)
T TIGR01454 204 R 204 (205)
T ss_pred h
Confidence 4
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.3e-22 Score=168.38 Aligned_cols=195 Identities=19% Similarity=0.212 Sum_probs=131.9
Q ss_pred CceEEEEEcCCcccCCccH-----HHHHHHhCCChHH-HhhcC--CCChHHHHHHHHHHHHhCCCCHHHH----H----H
Q 044553 2 SGIVVIFDFDKTIIDCDSD-----NFVVDELGATDLF-NQLLP--TMPWNSLMDRMMKELHSQGKTIEDI----V----E 65 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~~-----~~~~~~~g~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~----~----~ 65 (275)
+.++|+|||||||+|+... ..+++++|.+... ..... +.......+.........+...+++ . +
T Consensus 6 ~~k~iiFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (222)
T PRK10826 6 QILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRREELPDTLGLRIDQVVDLWYARQPWNGPSRQEVVQRIIARVIS 85 (222)
T ss_pred cCcEEEEcCCCCCCcCHHHHHHHHHHHHHHCCCCCCHHHHHHHhhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence 3789999999999999653 4567778875322 11111 1122222222222211112222221 1 1
Q ss_pred -HHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCC
Q 044553 66 -VLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHG 144 (275)
Q Consensus 66 -~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~ 144 (275)
......++||+.++|+.|+++|++++|+||+....++.+++++|+..+|+.+++++... .+||.|
T Consensus 86 ~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------~~Kp~~-------- 151 (222)
T PRK10826 86 LIEETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLP------YSKPHP-------- 151 (222)
T ss_pred HHhcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCC------CCCCCH--------
Confidence 12357899999999999999999999999999999999999999999999999876432 346544
Q ss_pred CCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCCh
Q 044553 145 CNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDG 224 (275)
Q Consensus 145 ~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 224 (275)
+.++.++.+++.. |++|+||||+.+|+.+|+.+|...+++.+.... .+.... .+ ...+.++
T Consensus 152 -----------~~~~~~~~~~~~~-~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~-~~~~~~-----~~-~~~~~~~ 212 (222)
T PRK10826 152 -----------EVYLNCAAKLGVD-PLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQ-NDPRWA-----LA-DVKLESL 212 (222)
T ss_pred -----------HHHHHHHHHcCCC-HHHeEEEcCChhhHHHHHHcCCEEEEecCCccC-chhhhh-----hh-heeccCH
Confidence 6778888888765 589999999999999999999877666554321 111111 12 3367888
Q ss_pred HHHHH
Q 044553 225 EELEQ 229 (275)
Q Consensus 225 ~el~~ 229 (275)
.||..
T Consensus 213 ~dl~~ 217 (222)
T PRK10826 213 TELTA 217 (222)
T ss_pred HHHhh
Confidence 88865
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.7e-22 Score=167.61 Aligned_cols=169 Identities=13% Similarity=0.062 Sum_probs=117.1
Q ss_pred CCceEEEEEcCCcccCCcc-----HHHHHHHhCCChHH-HhhcCCCChHHHHHHHHHHHHhCCCCHHHHHH-------HH
Q 044553 1 MSGIVVIFDFDKTIIDCDS-----DNFVVDELGATDLF-NQLLPTMPWNSLMDRMMKELHSQGKTIEDIVE-------VL 67 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 67 (275)
|++++|+|||||||+|+.. +..+++++|++... .....+......++.+...... ..-.+.+.. ..
T Consensus 1 M~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 79 (218)
T PRK11587 1 MRCKGFLFDLDGTLVDSLPAVERAWSNWADRHGIAPDEVLNFIHGKQAITSLRHFMAGASE-AEIQAEFTRLEQIEATDT 79 (218)
T ss_pred CCCCEEEEcCCCCcCcCHHHHHHHHHHHHHHcCCCHHHHHHHHcCCCHHHHHHHHhccCCc-HHHHHHHHHHHHHHHhhh
Confidence 8889999999999999964 36688888986421 1222233333333322211000 000111111 12
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCc
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNL 147 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~ 147 (275)
....++||+.++|+.|+++|++++|+||++...+...++..++ .+|+.+++++... ..||+|
T Consensus 80 ~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~~i~~~~~~~------~~KP~p----------- 141 (218)
T PRK11587 80 EGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPEVFVTAERVK------RGKPEP----------- 141 (218)
T ss_pred cCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCccEEEEHHHhc------CCCCCc-----------
Confidence 3578999999999999999999999999998888888888898 4577787765431 347766
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEee
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMP 197 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~ 197 (275)
..+...+..++.. |++|+|||||..|+.+|+++|...+++.
T Consensus 142 --------~~~~~~~~~~g~~-p~~~l~igDs~~di~aA~~aG~~~i~v~ 182 (218)
T PRK11587 142 --------DAYLLGAQLLGLA-PQECVVVEDAPAGVLSGLAAGCHVIAVN 182 (218)
T ss_pred --------HHHHHHHHHcCCC-cccEEEEecchhhhHHHHHCCCEEEEEC
Confidence 4556666666655 5899999999999999999998766664
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-21 Score=161.44 Aligned_cols=200 Identities=16% Similarity=0.172 Sum_probs=141.9
Q ss_pred ceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHHHHH
Q 044553 3 GIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAIKS 82 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~ 82 (275)
+++|+|||||||++. .+..+++.+|.+...........+...+...+..+...+.+.+++........++||+.++|+.
T Consensus 1 ~~~v~FD~DGTL~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~pg~~e~L~~ 79 (205)
T PRK13582 1 MEIVCLDLEGVLVPE-IWIAFAEKTGIPELRATTRDIPDYDVLMKQRLDILDEHGLGLADIQEVIATLDPLPGAVEFLDW 79 (205)
T ss_pred CeEEEEeCCCCChhh-HHHHHHHHcCChHHHHHhcCCCCHHHHHHHHHHHHHHcCCCHHHHHHHHHhCCCCCCHHHHHHH
Confidence 478999999999964 6677888999875443333445677777777776665567788888888999999999999999
Q ss_pred HHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHHHHHH
Q 044553 83 AHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQ 162 (275)
Q Consensus 83 L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~ 162 (275)
|+++ ++++|+||+....++.+++++|+..+|+..+..+ .+|.+.+... ++..+|...++.+.
T Consensus 80 L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~----~~~~i~~~~~-------------~~p~~k~~~l~~~~ 141 (205)
T PRK13582 80 LRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVD----EDGMITGYDL-------------RQPDGKRQAVKALK 141 (205)
T ss_pred HHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEEC----CCCeEECccc-------------cccchHHHHHHHHH
Confidence 9999 9999999999999999999999988776544322 1222221110 01123677777654
Q ss_pred HhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHHHHHHHH
Q 044553 163 ASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHLVN 236 (275)
Q Consensus 163 ~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~l~~~~~ 236 (275)
.. +++++|||||.+|+.++.+++. ++.+.. . .......+. ...++++.+|..++.++..
T Consensus 142 ~~-----~~~~v~iGDs~~D~~~~~aa~~-~v~~~~-~---~~~~~~~~~-----~~~~~~~~el~~~l~~~~~ 200 (205)
T PRK13582 142 SL-----GYRVIAAGDSYNDTTMLGEADA-GILFRP-P---ANVIAEFPQ-----FPAVHTYDELLAAIDKASA 200 (205)
T ss_pred Hh-----CCeEEEEeCCHHHHHHHHhCCC-CEEECC-C---HHHHHhCCc-----ccccCCHHHHHHHHHHHHh
Confidence 32 4799999999999988877664 444321 1 122222221 2368999999988887764
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-22 Score=168.92 Aligned_cols=192 Identities=17% Similarity=0.200 Sum_probs=128.9
Q ss_pred EEEEcCCcccCCcc-----HHHHHHHhCCCh-HHHhhcC--CCChHHHHHHHHHHHHhCCCCH---HH----HHHHH---
Q 044553 6 VIFDFDKTIIDCDS-----DNFVVDELGATD-LFNQLLP--TMPWNSLMDRMMKELHSQGKTI---ED----IVEVL--- 67 (275)
Q Consensus 6 viFD~DGTL~d~~~-----~~~~~~~~g~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~~--- 67 (275)
|+|||||||+|+.. +..+++++|.+. ....... +......++.++..... ..+. ++ +.+.+
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 79 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVNMALAALGLPPATLARVIGFIGNGVPVLMERVLAWAGQ-EPDAQRVAELRKLFDRHYEEV 79 (213)
T ss_pred CeecCCCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhcccHHHHHHHHhhcccc-ccChHHHHHHHHHHHHHHHHh
Confidence 69999999999865 355667777752 1111111 22223333333322111 1111 11 12222
Q ss_pred --hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCC
Q 044553 68 --KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGC 145 (275)
Q Consensus 68 --~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~ 145 (275)
....++||+.++|+.|+++|++++|+||+....++.+++++|+..+|+.+++++... ..||.|
T Consensus 80 ~~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------~~Kp~p--------- 144 (213)
T TIGR01449 80 AGELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLA------QRKPHP--------- 144 (213)
T ss_pred ccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCC------CCCCCh---------
Confidence 136899999999999999999999999999999999999999999999998876431 346644
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChH
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGE 225 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 225 (275)
+.+..++.+++.. +++|+||||+.+|+.+|+++|...+++..+......+.... + ...++++.
T Consensus 145 ----------~~~~~~~~~~~~~-~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~-----a-~~~i~~~~ 207 (213)
T TIGR01449 145 ----------DPLLLAAERLGVA-PQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLP-----P-DVLYDSLN 207 (213)
T ss_pred ----------HHHHHHHHHcCCC-hhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcC-----C-CeEeCCHH
Confidence 6778888887765 58999999999999999999987666643322222222221 2 23678999
Q ss_pred HHHHH
Q 044553 226 ELEQI 230 (275)
Q Consensus 226 el~~~ 230 (275)
||..+
T Consensus 208 ~l~~~ 212 (213)
T TIGR01449 208 ELPPL 212 (213)
T ss_pred HHHhh
Confidence 88764
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.7e-22 Score=166.69 Aligned_cols=200 Identities=18% Similarity=0.151 Sum_probs=136.2
Q ss_pred CceEEEEEcCCcccCCcc-----HHHHHHHhCCChH-HHhh--cCCCChHHHHHHHHHHHHhCCCCHHH-------HHHH
Q 044553 2 SGIVVIFDFDKTIIDCDS-----DNFVVDELGATDL-FNQL--LPTMPWNSLMDRMMKELHSQGKTIED-------IVEV 66 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 66 (275)
++++|+||+||||+|+.. +..+++++|.+.. .... ..+......+...+... ....+.++ +.+.
T Consensus 5 ~~~~iiFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 83 (226)
T PRK13222 5 DIRAVAFDLDGTLVDSAPDLAAAVNAALAALGLPPAGEERVRTWVGNGADVLVERALTWA-GREPDEELLEKLRELFDRH 83 (226)
T ss_pred cCcEEEEcCCcccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhCccHHHHHHHHHhhc-cCCccHHHHHHHHHHHHHH
Confidence 478999999999999854 3556677777522 1111 11222333333333221 11222222 1121
Q ss_pred H-----hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCC
Q 044553 67 L-----KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKC 141 (275)
Q Consensus 67 ~-----~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~ 141 (275)
+ ....++||+.++|+.|+++|++++|+||+....++.+++++|+..+|+.+++.+... ..||.
T Consensus 84 ~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------~~kp~------ 151 (226)
T PRK13222 84 YAENVAGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLP------NKKPD------ 151 (226)
T ss_pred HHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCC------CCCcC------
Confidence 1 147799999999999999999999999999999999999999999999888765421 33553
Q ss_pred CCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeC
Q 044553 142 SHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEW 221 (275)
Q Consensus 142 ~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 221 (275)
+.+++.++.+++.. +++|+||||+.+|+.+|+.+|...+++..+..+..++...++ ...+
T Consensus 152 -------------~~~~~~~~~~~~~~-~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~------~~~i 211 (226)
T PRK13222 152 -------------PAPLLLACEKLGLD-PEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEP------DVVI 211 (226)
T ss_pred -------------hHHHHHHHHHcCCC-hhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCC------CEEE
Confidence 36777888877665 589999999999999999999877777644322222222221 2367
Q ss_pred CChHHHHHHHHHH
Q 044553 222 TDGEELEQILLHL 234 (275)
Q Consensus 222 ~~~~el~~~l~~~ 234 (275)
+++.+|..++.+.
T Consensus 212 ~~~~~l~~~l~~~ 224 (226)
T PRK13222 212 DHFAELLPLLGLA 224 (226)
T ss_pred CCHHHHHHHHHHh
Confidence 9999999887653
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-21 Score=173.54 Aligned_cols=197 Identities=14% Similarity=0.105 Sum_probs=135.2
Q ss_pred ceEEEEEcCCcccCCcc-H-----HHHHHHhCCChHHHh---hcCCCChHHHHHHHHHHHHhCCCCHHHH----HHHH--
Q 044553 3 GIVVIFDFDKTIIDCDS-D-----NFVVDELGATDLFNQ---LLPTMPWNSLMDRMMKELHSQGKTIEDI----VEVL-- 67 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~-~-----~~~~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-- 67 (275)
.++|||||||||+|+.. . ..+++++|.+....+ ...+......+..++.... .....+++ .+.+
T Consensus 131 ~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~~~~e~~~~~~G~~~~~~l~~ll~~~~-~~~~~e~l~~~~~~~y~~ 209 (381)
T PLN02575 131 WLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSPPPAFILRRVEGMKNEQAISEVLCWSR-DPAELRRMATRKEEIYQA 209 (381)
T ss_pred CCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHhhccC-CHHHHHHHHHHHHHHHHH
Confidence 58999999999999864 2 346677787533222 2223444444444332100 00001111 1111
Q ss_pred ---hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCC
Q 044553 68 ---KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHG 144 (275)
Q Consensus 68 ---~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~ 144 (275)
....++||+.++|+.|+++|++++|+||+....++.+++++|+..+|+.|++.+... ..||.|
T Consensus 210 ~~~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~------~~KP~P-------- 275 (381)
T PLN02575 210 LQGGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVY------RGKPDP-------- 275 (381)
T ss_pred HhccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCC------CCCCCH--------
Confidence 236789999999999999999999999999999999999999999999999877642 346655
Q ss_pred CCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCCh
Q 044553 145 CNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDG 224 (275)
Q Consensus 145 ~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 224 (275)
+++..++.+++.. +++|+||||+..|+.+|+++|+..+++.. ++...++ .. + ...++++
T Consensus 276 -----------eifl~A~~~lgl~-Peecl~IGDS~~DIeAAk~AGm~~IgV~~-~~~~~~l--~~-----A-d~iI~s~ 334 (381)
T PLN02575 276 -----------EMFIYAAQLLNFI-PERCIVFGNSNQTVEAAHDARMKCVAVAS-KHPIYEL--GA-----A-DLVVRRL 334 (381)
T ss_pred -----------HHHHHHHHHcCCC-cccEEEEcCCHHHHHHHHHcCCEEEEECC-CCChhHh--cC-----C-CEEECCH
Confidence 6777777777655 58999999999999999999997777653 3332221 11 1 2257999
Q ss_pred HHHHHHHHHHH
Q 044553 225 EELEQILLHLV 235 (275)
Q Consensus 225 ~el~~~l~~~~ 235 (275)
.||.....+.+
T Consensus 335 ~EL~~~~l~~l 345 (381)
T PLN02575 335 DELSIVDLKNL 345 (381)
T ss_pred HHHHHHHHhhh
Confidence 99855444333
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.1e-21 Score=159.01 Aligned_cols=173 Identities=18% Similarity=0.285 Sum_probs=126.5
Q ss_pred CceEEEEEcCCcccCCccHHHHHHHhCCChHHH----hhc-CCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCH
Q 044553 2 SGIVVIFDFDKTIIDCDSDNFVVDELGATDLFN----QLL-PTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRV 76 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~ 76 (275)
++++++|||||||++++++..+++.+|.+.... ... +...+.....+.+..+. +...+.+........++||+
T Consensus 13 ~~k~iiFD~DGTL~~~~~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~ 90 (219)
T TIGR00338 13 SKKLVVFDMDSTLINAETIDEIAKIAGVEEEVSEITERAMRGELDFKASLRERVALLK--GLPVELLKEVRENLPLTEGA 90 (219)
T ss_pred cCCEEEEeCcccCCCchHHHHHHHHhCCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhC--CCCHHHHHHHHhcCCcCCCH
Confidence 468999999999999999888999998853322 222 23445555555444442 44556677777888999999
Q ss_pred HHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHH
Q 044553 77 VPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGV 156 (275)
Q Consensus 77 ~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~ 156 (275)
.++|+.|+++|++++|+||+....++.+++++|+..+|+..+..+ +|.+.+..... . ..+.+|..
T Consensus 91 ~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~-----~~~~~~~~~~~-----~-----~~~~~k~~ 155 (219)
T TIGR00338 91 EELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVE-----DGKLTGLVEGP-----I-----VDASYKGK 155 (219)
T ss_pred HHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEE-----CCEEEEEecCc-----c-----cCCcccHH
Confidence 999999999999999999999999999999999987765433211 23333322111 0 01234889
Q ss_pred HHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCC
Q 044553 157 VIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEG 192 (275)
Q Consensus 157 ~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~ 192 (275)
+++.++.+++.. +++|+|||||.+|+.+|..+|..
T Consensus 156 ~~~~~~~~~~~~-~~~~i~iGDs~~Di~aa~~ag~~ 190 (219)
T TIGR00338 156 TLLILLRKEGIS-PENTVAVGDGANDLSMIKAAGLG 190 (219)
T ss_pred HHHHHHHHcCCC-HHHEEEEECCHHHHHHHHhCCCe
Confidence 999998887664 58999999999999999887663
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.1e-21 Score=159.72 Aligned_cols=112 Identities=18% Similarity=0.310 Sum_probs=95.7
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCC
Q 044553 63 IVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCS 142 (275)
Q Consensus 63 ~~~~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~ 142 (275)
+.+.+....++||+.++|++|+++|++++|+||++...++..++++|+..+|+.+++++..- ..||.|
T Consensus 84 ~~~~~~~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~------~~KP~~------ 151 (198)
T TIGR01428 84 LAEAYLRLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVR------AYKPAP------ 151 (198)
T ss_pred HHHHHhcCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcC------CCCCCH------
Confidence 44555678899999999999999999999999999999999999999999999999877531 346655
Q ss_pred CCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCC
Q 044553 143 HGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKN 200 (275)
Q Consensus 143 ~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~ 200 (275)
.+++.++.+++.. |+++++|||+.+|+.+|+++|+..+++.+.+
T Consensus 152 -------------~~~~~~~~~~~~~-p~~~~~vgD~~~Di~~A~~~G~~~i~v~r~~ 195 (198)
T TIGR01428 152 -------------QVYQLALEALGVP-PDEVLFVASNPWDLGGAKKFGFKTAWVNRPG 195 (198)
T ss_pred -------------HHHHHHHHHhCCC-hhhEEEEeCCHHHHHHHHHCCCcEEEecCCC
Confidence 6777787777765 5899999999999999999999888887765
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.7e-21 Score=167.79 Aligned_cols=204 Identities=16% Similarity=0.155 Sum_probs=135.5
Q ss_pred ceEEEEEcCCcccCCcc-----HHHHHHHhCCChH-HHhhc--CCCChHHHHHHHHHH-HHhCCCCH---HH----HHHH
Q 044553 3 GIVVIFDFDKTIIDCDS-----DNFVVDELGATDL-FNQLL--PTMPWNSLMDRMMKE-LHSQGKTI---ED----IVEV 66 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~-~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~---~~----~~~~ 66 (275)
+++|+|||||||+|+.. +..+++++|.+.. ..... .+..........+.. ....+.+. ++ +.+.
T Consensus 13 ~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 92 (272)
T PRK13223 13 PRLVMFDLDGTLVDSVPDLAAAVDRMLLELGRPPAGLEAVRHWVGNGAPVLVRRALAGSIDHDGVDDELAEQALALFMEA 92 (272)
T ss_pred CCEEEEcCCCccccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhChhHHHHHHHHhcccccccCCCHHHHHHHHHHHHHH
Confidence 68999999999999954 4667788887532 11111 122222223322211 11111221 11 1222
Q ss_pred H----hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCC
Q 044553 67 L----KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCS 142 (275)
Q Consensus 67 ~----~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~ 142 (275)
+ ....++||+.++|+.|+++|++++|+||++...++.+++++|+..+|+.+++++... ..||.|
T Consensus 93 ~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~------~~Kp~p------ 160 (272)
T PRK13223 93 YADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLP------QKKPDP------ 160 (272)
T ss_pred HHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCC------CCCCCc------
Confidence 2 235689999999999999999999999999999999999999999999998876421 245544
Q ss_pred CCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCC
Q 044553 143 HGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWT 222 (275)
Q Consensus 143 ~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 222 (275)
..++.++..++.. +++|+||||+.+|+.+|+++|+..+++..+......+....+ ...++
T Consensus 161 -------------~~~~~~~~~~g~~-~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~------~~vi~ 220 (272)
T PRK13223 161 -------------AALLFVMKMAGVP-PSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESP------ALVID 220 (272)
T ss_pred -------------HHHHHHHHHhCCC-hhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCC------CEEEC
Confidence 6777777777655 589999999999999999999876666543222223322222 23578
Q ss_pred ChHHHHHHHHHHHHHh
Q 044553 223 DGEELEQILLHLVNTI 238 (275)
Q Consensus 223 ~~~el~~~l~~~~~~~ 238 (275)
++.+|.+.+.....++
T Consensus 221 ~l~el~~~~~~~~~~~ 236 (272)
T PRK13223 221 DLRALLPGCADPAAEI 236 (272)
T ss_pred CHHHHHHHHhcccccc
Confidence 9999987666444333
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.5e-21 Score=161.83 Aligned_cols=107 Identities=19% Similarity=0.179 Sum_probs=90.0
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCc
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNL 147 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~ 147 (275)
..+.++||+.++|++|+++|++++|+||+....++..++++|+..+|+.+++++... ..||+|
T Consensus 91 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~------~~KP~~----------- 153 (221)
T TIGR02253 91 AYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEG------VEKPHP----------- 153 (221)
T ss_pred HhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCC------CCCCCH-----------
Confidence 347899999999999999999999999999999999999999999999998876532 346655
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCC-CCcccccccCCCCeEeecCC
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRKN 200 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~~ 200 (275)
+.++.++.+++.. +++++||||+. +|+.+|+++|+..+++....
T Consensus 154 --------~~~~~~~~~~~~~-~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~ 198 (221)
T TIGR02253 154 --------KIFYAALKRLGVK-PEEAVMVGDRLDKDIKGAKNLGMKTVWINQGK 198 (221)
T ss_pred --------HHHHHHHHHcCCC-hhhEEEECCChHHHHHHHHHCCCEEEEECCCC
Confidence 6677777777655 48999999997 89999999998877766543
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.3e-21 Score=160.33 Aligned_cols=107 Identities=11% Similarity=0.111 Sum_probs=89.3
Q ss_pred HhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCC
Q 044553 67 LKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCN 146 (275)
Q Consensus 67 ~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~ 146 (275)
.....++||+.++|+.|+++|++++|+||++...++..++++|+.++|+.+++++... ..||+|
T Consensus 89 ~~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~------~~KP~p---------- 152 (224)
T PRK14988 89 GPRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFG------YPKEDQ---------- 152 (224)
T ss_pred hccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCC------CCCCCH----------
Confidence 3568899999999999999999999999999999999999999999999999876532 346655
Q ss_pred cCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 147 LCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 147 ~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
+++..++.+++.. |++|+||||+..|+.+|+++|+..++.+..
T Consensus 153 ---------~~~~~~~~~~~~~-p~~~l~igDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 153 ---------RLWQAVAEHTGLK-AERTLFIDDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred ---------HHHHHHHHHcCCC-hHHEEEEcCCHHHHHHHHHcCCeEEEEEeC
Confidence 6777777777654 589999999999999999988865443333
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.9e-20 Score=154.09 Aligned_cols=174 Identities=18% Similarity=0.166 Sum_probs=121.1
Q ss_pred CceEEEEEcCCcccCCcc-HHHHHHHhCCChHHH----hh-cCCCChHHHHHHHHHHHHh--CCCCHHHHHHHHhcCCCC
Q 044553 2 SGIVVIFDFDKTIIDCDS-DNFVVDELGATDLFN----QL-LPTMPWNSLMDRMMKELHS--QGKTIEDIVEVLKRIPIH 73 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~-~~~~~~~~g~~~~~~----~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 73 (275)
|+|+|+|||||||+++++ +.++...+|.+.... .. .+...+..........+.. .....+.+.....++.++
T Consensus 3 ~~k~viFD~DGTLid~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (201)
T TIGR01491 3 MIKLIIFDLDGTLTDVMSSWEYLHRRLETCGLAKKNAELFFSGRISYEEWARLDASLWKRRSGRLRREEVEEIFKEISLR 82 (201)
T ss_pred cceEEEEeCCCCCcCCccHHHHHHHHhCchHHHHHHHHHHHcCCCCHHHHHHHHHHHHhhcccCCCHHHHHHHHHhCCCC
Confidence 368999999999999765 555666677653221 12 2334445544433332222 123455677777889999
Q ss_pred CCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCc
Q 044553 74 PRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMC 153 (275)
Q Consensus 74 pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~ 153 (275)
||+.++|++|+++|++++|+||+....++.+++++|+..+|+..+..+ ..|.. +|.+.. . ....+
T Consensus 83 ~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~----~~g~~--~p~~~~--------~-~~~~~ 147 (201)
T TIGR01491 83 DYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFD----EKGFI--QPDGIV--------R-VTFDN 147 (201)
T ss_pred ccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEc----CCCeE--ecceee--------E-Ecccc
Confidence 999999999999999999999999999999999999987766554332 12222 232210 0 01124
Q ss_pred hHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 154 KGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 154 K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
|..++++++.+++.. +++++|||||.+|+.++..+|.
T Consensus 148 k~~~~~~~~~~~~~~-~~~~i~iGDs~~D~~~a~~ag~ 184 (201)
T TIGR01491 148 KGEAVERLKRELNPS-LTETVAVGDSKNDLPMFEVADI 184 (201)
T ss_pred HHHHHHHHHHHhCCC-HHHEEEEcCCHhHHHHHHhcCC
Confidence 788999988877654 5799999999999999977665
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.7e-21 Score=160.31 Aligned_cols=169 Identities=14% Similarity=0.139 Sum_probs=120.0
Q ss_pred CceEEEEEcCCcccCCcc-----HHHHHHHhCCChHHH---hhcCCCChHHHHHHHHHHHHhCCCCHHHHHHH-------
Q 044553 2 SGIVVIFDFDKTIIDCDS-----DNFVVDELGATDLFN---QLLPTMPWNSLMDRMMKELHSQGKTIEDIVEV------- 66 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 66 (275)
.+++|+||+||||+|+.. +..+++.+|.+.... ....+......+..+..... ...+.+++...
T Consensus 3 ~~~~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 81 (221)
T PRK10563 3 QIEAVFFDCDGTLVDSEVICSRAYVTMFAEFGITLSLEEVFKRFKGVKLYEIIDIISKEHG-VTLAKAELEPVYRAEVAR 81 (221)
T ss_pred CCCEEEECCCCCCCCChHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHHHHhC-CCCCHHHHHHHHHHHHHH
Confidence 479999999999999865 355677788753222 22233344445555554432 22233333221
Q ss_pred --HhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcc-eEecCCCccCCCCceeecccCCCCCCCC
Q 044553 67 --LKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFS-EINTNPGFVDEEGRLRIFPFHDFTKCSH 143 (275)
Q Consensus 67 --~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd-~i~~~~~~~~~~g~~~~kp~~~~~~~~~ 143 (275)
.....++||+.++|+.|+ ++++|+||+....+...++++|+.++|+ .+++++... ..||+|
T Consensus 82 ~~~~~~~~~~gv~~~L~~L~---~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~------~~KP~p------- 145 (221)
T PRK10563 82 LFDSELEPIAGANALLESIT---VPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQ------RWKPDP------- 145 (221)
T ss_pred HHHccCCcCCCHHHHHHHcC---CCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcC------CCCCCh-------
Confidence 134789999999999993 9999999999999999999999999996 566654321 347755
Q ss_pred CCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCC
Q 044553 144 GCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKN 200 (275)
Q Consensus 144 ~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~ 200 (275)
+++..++..++.. |++|+||||+.+|+.+|+++|...+++..++
T Consensus 146 ------------~~~~~a~~~~~~~-p~~~l~igDs~~di~aA~~aG~~~i~~~~~~ 189 (221)
T PRK10563 146 ------------ALMFHAAEAMNVN-VENCILVDDSSAGAQSGIAAGMEVFYFCADP 189 (221)
T ss_pred ------------HHHHHHHHHcCCC-HHHeEEEeCcHhhHHHHHHCCCEEEEECCCC
Confidence 6777788877765 5899999999999999999998766554333
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.8e-21 Score=158.83 Aligned_cols=172 Identities=20% Similarity=0.187 Sum_probs=124.3
Q ss_pred ceEEEEEcCCcccCCcc-----HHHHHHHhCCChH---HHhhcCCCChHHHHHHHHHHHHhCC-CCHHH--------HHH
Q 044553 3 GIVVIFDFDKTIIDCDS-----DNFVVDELGATDL---FNQLLPTMPWNSLMDRMMKELHSQG-KTIED--------IVE 65 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------~~~ 65 (275)
.++|||||||||+||+. +..+++++|+... .....+...+ .....+........ ..... ...
T Consensus 2 ~~avIFD~DGvLvDse~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (221)
T COG0637 2 IKAVIFDMDGTLVDSEPLHARAWLEALKEYGIEISDEEIRELHGGGIA-RIIDLLRKLAAGEDPADLAELERLLYEAEAL 80 (221)
T ss_pred CcEEEEcCCCCcCcchHHHHHHHHHHHHHcCCCCCHHHHHHHHCCChH-HHHHHHHHHhcCCcccCHHHHHHHHHHHHHh
Confidence 58999999999999976 3667888887632 2233232222 22222222222111 11111 112
Q ss_pred HHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCC
Q 044553 66 VLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGC 145 (275)
Q Consensus 66 ~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~ 145 (275)
......+.||+.++|+.|+++|++++++|+++...++..++.+|+.++|+.+++++... ++||+|+
T Consensus 81 ~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~------~~KP~Pd-------- 146 (221)
T COG0637 81 ELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVA------RGKPAPD-------- 146 (221)
T ss_pred hhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHh------cCCCCCH--------
Confidence 34558999999999999999999999999999999999999999999999998877654 5699985
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCch
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFP 202 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~ 202 (275)
++.....+++.. |++|+.|+||.+++.+|+++|+..+++.. +++
T Consensus 147 -----------~yL~Aa~~Lgv~-P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~-~~~ 190 (221)
T COG0637 147 -----------IYLLAAERLGVD-PEECVVVEDSPAGIQAAKAAGMRVVGVPA-GHD 190 (221)
T ss_pred -----------HHHHHHHHcCCC-hHHeEEEecchhHHHHHHHCCCEEEEecC-CCC
Confidence 233334444433 68999999999999999999998888876 443
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.1e-20 Score=151.62 Aligned_cols=197 Identities=15% Similarity=0.170 Sum_probs=135.3
Q ss_pred eEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHHHHHH
Q 044553 4 IVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAIKSA 83 (275)
Q Consensus 4 ~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L 83 (275)
++++||+||||++. .+..++...|.............+..+.+.-+..+...+.+.+.+.+....++++||+.++|++|
T Consensus 2 ~la~FDlD~TLi~~-~w~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~ll~~~g~~~~~i~~~~~~i~l~pga~ell~~l 80 (203)
T TIGR02137 2 EIACLDLEGVLVPE-IWIAFAEKTGIDALKATTRDIPDYDVLMKQRLRILDEHGLKLGDIQEVIATLKPLEGAVEFVDWL 80 (203)
T ss_pred eEEEEeCCcccHHH-HHHHHHHHcCCcHHHHHhcCCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHhCCCCccHHHHHHHH
Confidence 57999999999986 57788888886543322222334455555444444434788889988888899999999999999
Q ss_pred HHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHHHHHHH
Q 044553 84 HALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQA 163 (275)
Q Consensus 84 ~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~ 163 (275)
++++ +++|+|++...+++.+++++|++.+|. ++..++.+|.+++.... ...+|...++.+..
T Consensus 81 k~~~-~~~IVS~~~~~~~~~il~~lgi~~~~a----n~l~~~~~g~~tG~~~~-------------~~~~K~~~l~~l~~ 142 (203)
T TIGR02137 81 RERF-QVVILSDTFYEFSQPLMRQLGFPTLLC----HKLEIDDSDRVVGYQLR-------------QKDPKRQSVIAFKS 142 (203)
T ss_pred HhCC-eEEEEeCChHHHHHHHHHHcCCchhhc----eeeEEecCCeeECeeec-------------CcchHHHHHHHHHh
Confidence 9975 999999999999999999999975554 33223221333332111 01248888888743
Q ss_pred hhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHHHHHH
Q 044553 164 SLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHL 234 (275)
Q Consensus 164 ~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~l~~~ 234 (275)
. ..++++||||.||+.++..++. ++++... + .....-+..+ .+.+.+||+..+.+.
T Consensus 143 ~-----~~~~v~vGDs~nDl~ml~~Ag~-~ia~~ak--~--~~~~~~~~~~-----~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 143 L-----YYRVIAAGDSYNDTTMLSEAHA-GILFHAP--E--NVIREFPQFP-----AVHTYEDLKREFLKA 198 (203)
T ss_pred h-----CCCEEEEeCCHHHHHHHHhCCC-CEEecCC--H--HHHHhCCCCC-----cccCHHHHHHHHHHH
Confidence 2 2489999999999999877554 4444322 1 2223333333 578899998887754
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-20 Score=152.80 Aligned_cols=163 Identities=19% Similarity=0.212 Sum_probs=114.2
Q ss_pred ceEEEEEcCCcccCCccH-----HHHHHHhCCChH--HHhhcCCCChHHHHHHHHHHHHhCCCCHHHH-----------H
Q 044553 3 GIVVIFDFDKTIIDCDSD-----NFVVDELGATDL--FNQLLPTMPWNSLMDRMMKELHSQGKTIEDI-----------V 64 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~-----~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~ 64 (275)
+++|+||+||||+|+... ..+++++|.+.. ......+......+...+.... .+.+.+++ .
T Consensus 1 ~~~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 79 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPLHAQAWKHLADKYGIEFDKQYNTSLGGLSREDILRAILKLRK-PGLSLETIHQLAERKNELYR 79 (185)
T ss_pred CCeEEEcCCCcccCChHHHHHHHHHHHHHcCCCCCHHHHHHcCCCCHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHH
Confidence 478999999999999753 557777887521 1222233333444444433221 12222221 1
Q ss_pred HHH--hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCC
Q 044553 65 EVL--KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCS 142 (275)
Q Consensus 65 ~~~--~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~ 142 (275)
+.. ....++||+.++|+.|+++|++++|+||+ ..++.+++++|+.++|+.+++++... ..||.|
T Consensus 80 ~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~------~~kp~~------ 145 (185)
T TIGR02009 80 ELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVK------EGKPHP------ 145 (185)
T ss_pred HHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCC------CCCCCh------
Confidence 112 23789999999999999999999999998 67899999999999999998765421 245544
Q ss_pred CCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCe
Q 044553 143 HGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDH 194 (275)
Q Consensus 143 ~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~ 194 (275)
.+++.++.+++.. +++++||||+.+|+.+|+++|+..+
T Consensus 146 -------------~~~~~~~~~~~~~-~~~~v~IgD~~~di~aA~~~G~~~i 183 (185)
T TIGR02009 146 -------------ETFLLAAELLGVS-PNECVVFEDALAGVQAARAAGMFAV 183 (185)
T ss_pred -------------HHHHHHHHHcCCC-HHHeEEEeCcHhhHHHHHHCCCeEe
Confidence 5667777777654 5899999999999999988877543
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.1e-20 Score=174.27 Aligned_cols=193 Identities=16% Similarity=0.147 Sum_probs=127.7
Q ss_pred CceEEEEEcCCcccCCcc-----HHHHHHHhCC------C---hHHHhhcCCCChHHHHHHHHHHHHhCCCCHHH----H
Q 044553 2 SGIVVIFDFDKTIIDCDS-----DNFVVDELGA------T---DLFNQLLPTMPWNSLMDRMMKELHSQGKTIED----I 63 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~-----~~~~~~~~g~------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 63 (275)
|+++|+|||||||+|+.. +..++++++. . ...... .+......++.++..... . ..++ +
T Consensus 240 m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~~~~~~~~l~~~~~~-~-~~~~~~~~~ 316 (459)
T PRK06698 240 MLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVTPIDKYREI-MGVPLPKVWEALLPDHSL-E-IREQTDAYF 316 (459)
T ss_pred hhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCCCHHHHHHH-cCCChHHHHHHHhhhcch-h-HHHHHHHHH
Confidence 458999999999999976 3556666631 1 111122 223334444443332110 0 0111 1
Q ss_pred HH----HH--hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCC
Q 044553 64 VE----VL--KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHD 137 (275)
Q Consensus 64 ~~----~~--~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~ 137 (275)
.+ .. ...+++||+.++|++|+++|++++|+||+....++.+++++|+..+|+.+++.+.. ..||.
T Consensus 317 ~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v-------~~~~k-- 387 (459)
T PRK06698 317 LERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQI-------NSLNK-- 387 (459)
T ss_pred HHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCC-------CCCCC--
Confidence 11 11 24689999999999999999999999999999999999999999999999987653 11332
Q ss_pred CCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEE
Q 044553 138 FTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAE 217 (275)
Q Consensus 138 ~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 217 (275)
+..+...+.++ ++++|+||||+.+|+.+|+++|...+++........++ . .+
T Consensus 388 -----------------P~~~~~al~~l---~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~--~-----~~- 439 (459)
T PRK06698 388 -----------------SDLVKSILNKY---DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDEL--A-----QA- 439 (459)
T ss_pred -----------------cHHHHHHHHhc---CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCccccc--C-----CC-
Confidence 24455555544 25799999999999999999998777665432211111 1 12
Q ss_pred EeeCCChHHHHHHHHHH
Q 044553 218 IHEWTDGEELEQILLHL 234 (275)
Q Consensus 218 ~~~~~~~~el~~~l~~~ 234 (275)
...++++.||..++..+
T Consensus 440 d~~i~~l~el~~~l~~~ 456 (459)
T PRK06698 440 DIVIDDLLELKGILSTV 456 (459)
T ss_pred CEEeCCHHHHHHHHHHH
Confidence 23579999998877543
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-20 Score=152.68 Aligned_cols=162 Identities=20% Similarity=0.190 Sum_probs=112.6
Q ss_pred EEEEEcCCcccCCcc-----HHHHHHHhCCChHH--HhhcCCCChHHHHHHHHHHHHhCCCCHHH-----------HHHH
Q 044553 5 VVIFDFDKTIIDCDS-----DNFVVDELGATDLF--NQLLPTMPWNSLMDRMMKELHSQGKTIED-----------IVEV 66 (275)
Q Consensus 5 ~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~ 66 (275)
+|+|||||||+|+.. +..+++.+|++... .....+......++..+.... ...+.+. +.+.
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 79 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWKALADELGIPFDEEFNESLKGVSREDSLERILDLGG-KKYSEEEKEELAERKNDYYVEL 79 (185)
T ss_pred CeEEcCCCccccChHHHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHH
Confidence 489999999999975 35677788876221 122233344444444443321 1222221 1111
Q ss_pred H---hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCC
Q 044553 67 L---KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSH 143 (275)
Q Consensus 67 ~---~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~ 143 (275)
. ....++||+.++|++|+++|++++|+||+.. ....++++|+..+|+.+++++... ..||.|
T Consensus 80 ~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~------~~kp~p------- 144 (185)
T TIGR01990 80 LKELTPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIK------KGKPDP------- 144 (185)
T ss_pred HHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcC------CCCCCh-------
Confidence 1 1247899999999999999999999998743 467899999999999998766431 346644
Q ss_pred CCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeE
Q 044553 144 GCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHV 195 (275)
Q Consensus 144 ~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~ 195 (275)
++++..+.+++.. +++|+||||+.+|+.+|+.+|+..++
T Consensus 145 ------------~~~~~~~~~~~~~-~~~~v~vgD~~~di~aA~~aG~~~i~ 183 (185)
T TIGR01990 145 ------------EIFLAAAEGLGVS-PSECIGIEDAQAGIEAIKAAGMFAVG 183 (185)
T ss_pred ------------HHHHHHHHHcCCC-HHHeEEEecCHHHHHHHHHcCCEEEe
Confidence 6777777777654 58999999999999999988876554
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-20 Score=169.62 Aligned_cols=169 Identities=15% Similarity=0.114 Sum_probs=123.3
Q ss_pred ceEEEEEcCCcccCCcc-----HHHHHHHhCCChHHHhh--cCCCChHHHHHHHHHHHHhCCCCHHHH--------HHHH
Q 044553 3 GIVVIFDFDKTIIDCDS-----DNFVVDELGATDLFNQL--LPTMPWNSLMDRMMKELHSQGKTIEDI--------VEVL 67 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 67 (275)
+++|+||+||||+|+.. +..+++++|.+...... ..+......+..++..... ....+++ .+..
T Consensus 11 ik~VIFDlDGTLvDt~~~~~~a~~~~~~~~G~~~~~~~~~~~~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 89 (382)
T PLN02940 11 VSHVILDLDGTLLNTDGIVSDVLKAFLVKYGKQWDGREAQKIVGKTPLEAAATVVEDYGL-PCSTDEFNSEITPLLSEQW 89 (382)
T ss_pred CCEEEECCcCcCCcCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHHHHH
Confidence 57899999999999965 35577788875322222 1123334444444443321 2222221 2233
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHH-HcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCC
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILE-HLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCN 146 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~-~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~ 146 (275)
.+..++||+.++|+.|+++|++++|+||++...+...++ +.|+.++|+.|++++... ..||+|
T Consensus 90 ~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~------~~KP~p---------- 153 (382)
T PLN02940 90 CNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVE------KGKPSP---------- 153 (382)
T ss_pred ccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcC------CCCCCH----------
Confidence 467899999999999999999999999999999999887 689999999999877642 347755
Q ss_pred cCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeec
Q 044553 147 LCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPR 198 (275)
Q Consensus 147 ~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~ 198 (275)
+++..++.+++.. +++|+||||+.+|+.+|+++|...+++..
T Consensus 154 ---------~~~~~a~~~lgv~-p~~~l~VGDs~~Di~aA~~aGi~~I~v~~ 195 (382)
T PLN02940 154 ---------DIFLEAAKRLNVE-PSNCLVIEDSLPGVMAGKAAGMEVIAVPS 195 (382)
T ss_pred ---------HHHHHHHHHcCCC-hhHEEEEeCCHHHHHHHHHcCCEEEEECC
Confidence 6777777777655 58999999999999999999987666654
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.9e-20 Score=151.56 Aligned_cols=165 Identities=15% Similarity=0.163 Sum_probs=116.1
Q ss_pred ceEEEEEcCCcccCCcc-----HHHHHHHhCCChHHHhh--cCCCChHHHHHHHHHHHHhCCCCHHHHHH--------H-
Q 044553 3 GIVVIFDFDKTIIDCDS-----DNFVVDELGATDLFNQL--LPTMPWNSLMDRMMKELHSQGKTIEDIVE--------V- 66 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~- 66 (275)
.++|+|||||||+|+.. +..+++++|.+...... ..+.........++.... .....+++.. .
T Consensus 5 ~~~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 83 (188)
T PRK10725 5 YAGLIFDMDGTILDTEPTHRKAWREVLGRYGLQFDEQAMVALNGSPTWRIAQAIIELNQ-ADLDPHALAREKTEAVKSML 83 (188)
T ss_pred ceEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHHHhC-CCCCHHHHHHHHHHHHHHHH
Confidence 68999999999999964 36677788875321111 122222333343333221 1223332221 1
Q ss_pred HhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCC
Q 044553 67 LKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCN 146 (275)
Q Consensus 67 ~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~ 146 (275)
.....++|+ .++|..|++. ++++|+||++...++..++++|+.++|+.|++++... ..||.|
T Consensus 84 ~~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~------~~KP~p---------- 145 (188)
T PRK10725 84 LDSVEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQ------HHKPAP---------- 145 (188)
T ss_pred hccCCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhcc------CCCCCh----------
Confidence 234678885 6999999875 8999999999999999999999999999999877532 346655
Q ss_pred cCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEe
Q 044553 147 LCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVM 196 (275)
Q Consensus 147 ~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~ 196 (275)
+.+..+..+++.. +++|+||||+.+|+.+|+++|...+.+
T Consensus 146 ---------~~~~~~~~~~~~~-~~~~l~igDs~~di~aA~~aG~~~i~~ 185 (188)
T PRK10725 146 ---------DTFLRCAQLMGVQ-PTQCVVFEDADFGIQAARAAGMDAVDV 185 (188)
T ss_pred ---------HHHHHHHHHcCCC-HHHeEEEeccHhhHHHHHHCCCEEEee
Confidence 6777888777665 589999999999999999888765543
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.2e-20 Score=154.02 Aligned_cols=128 Identities=16% Similarity=0.098 Sum_probs=99.9
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcC
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLC 148 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~ 148 (275)
...++||+.++|++|+++ ++++|+||+....+...++++|+..+|+.+++++... ..||.|
T Consensus 95 ~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~------~~KP~~------------ 155 (224)
T TIGR02254 95 GHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAG------IQKPDK------------ 155 (224)
T ss_pred cCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccC------CCCCCH------------
Confidence 368999999999999999 9999999999999999999999999999999876431 346644
Q ss_pred CCCCchHHHHHHHHHhh-hcCCCCeEEEEcCCC-CCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHH
Q 044553 149 PPNMCKGVVIERIQASL-SKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEE 226 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~-~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e 226 (275)
.+++.++..+ +.. |++++||||+. +|+.+|+++|+..+++.+++.+. .. . ..+ .+.++++.|
T Consensus 156 -------~~~~~~~~~~~~~~-~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~--~~-~----~~~-~~~~~~~~e 219 (224)
T TIGR02254 156 -------EIFNYALERMPKFS-KEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPN--PD-D----IIP-TYEIRSLEE 219 (224)
T ss_pred -------HHHHHHHHHhcCCC-chheEEECCCcHHHHHHHHHCCCcEEEECCCCCCC--CC-C----CCC-ceEECCHHH
Confidence 6777777777 554 58999999998 79999999999888776543321 11 1 112 346789999
Q ss_pred HHHHH
Q 044553 227 LEQIL 231 (275)
Q Consensus 227 l~~~l 231 (275)
|..+|
T Consensus 220 l~~~~ 224 (224)
T TIGR02254 220 LYEIL 224 (224)
T ss_pred HHhhC
Confidence 88653
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.1e-20 Score=152.60 Aligned_cols=164 Identities=14% Similarity=0.186 Sum_probs=110.3
Q ss_pred eEEEEEcCCcccCCcc-----HHHHHHHhCCChHHHh---h--------------c---CCCChHHHHHHHHHHH-HhCC
Q 044553 4 IVVIFDFDKTIIDCDS-----DNFVVDELGATDLFNQ---L--------------L---PTMPWNSLMDRMMKEL-HSQG 57 (275)
Q Consensus 4 ~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~~~---~--------------~---~~~~~~~~~~~~~~~~-~~~~ 57 (275)
++|+||+||||+|+.. +..+++++|.+....+ . . .+..........+... ...+
T Consensus 1 k~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 80 (203)
T TIGR02252 1 KLITFDAVGTLLALKEPVGEVYCEIARKYGVEVSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDTFGRAG 80 (203)
T ss_pred CeEEEecCCceeeeCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHHHhcC
Confidence 5899999999999854 3567778887621110 0 0 0222222222222221 1111
Q ss_pred -CC---HHH-HHHHH------hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCC
Q 044553 58 -KT---IED-IVEVL------KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDE 126 (275)
Q Consensus 58 -~~---~~~-~~~~~------~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~ 126 (275)
.. ..+ +.... ....++||+.++|+.|+++|++++|+||+... +...++++|+..+|+.|++++..-
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~~-- 157 (203)
T TIGR02252 81 VPDPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEVG-- 157 (203)
T ss_pred CCCchhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeecccC--
Confidence 11 111 22222 12468999999999999999999999998765 578899999999999998766431
Q ss_pred CCceeecccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCC-CCcccccccCCCCe
Q 044553 127 EGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDH 194 (275)
Q Consensus 127 ~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~ 194 (275)
..||.| +.+..++..++.. |++++||||+. +|+.+|+++|+..+
T Consensus 158 ----~~KP~~-------------------~~~~~~~~~~~~~-~~~~~~IgD~~~~Di~~A~~aG~~~i 202 (203)
T TIGR02252 158 ----AEKPDP-------------------KIFQEALERAGIS-PEEALHIGDSLRNDYQGARAAGWRAL 202 (203)
T ss_pred ----CCCCCH-------------------HHHHHHHHHcCCC-hhHEEEECCCchHHHHHHHHcCCeee
Confidence 346655 6677777777654 58999999997 89999988887644
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-18 Score=153.02 Aligned_cols=175 Identities=15% Similarity=0.224 Sum_probs=127.7
Q ss_pred ceEEEEEcCCcccCCccHHHHHHHhCCChHHH----hh-cCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHH
Q 044553 3 GIVVIFDFDKTIIDCDSDNFVVDELGATDLFN----QL-LPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVV 77 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~ 77 (275)
.++|+|||||||+..+.+..+++.+|.+.... .. .+...+.+.+...+..+ .+...+.+....+.++++||+.
T Consensus 110 ~~LvvfDmDGTLI~~e~i~eia~~~g~~~~v~~it~~~m~Geldf~esl~~rv~~l--~g~~~~il~~v~~~l~l~pGa~ 187 (322)
T PRK11133 110 PGLLVMDMDSTAIQIECIDEIAKLAGTGEEVAEVTERAMRGELDFEASLRQRVATL--KGADANILQQVRENLPLMPGLT 187 (322)
T ss_pred CCEEEEECCCCCcchHHHHHHHHHhCCchHHHHHHHHHHcCCcCHHHHHHHHHHHh--CCCCHHHHHHHHHhCCCChhHH
Confidence 58999999999999999999999998864432 12 23445565555544433 2334444566667899999999
Q ss_pred HHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHH
Q 044553 78 PAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVV 157 (275)
Q Consensus 78 e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~ 157 (275)
++|++|+++|++++|+|++...+++.+++++|++. ++++...+ .+|.+.++...+ +..+.+|.+.
T Consensus 188 elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~----~~an~lei-~dg~ltg~v~g~----------iv~~k~K~~~ 252 (322)
T PRK11133 188 ELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDA----AVANELEI-MDGKLTGNVLGD----------IVDAQYKADT 252 (322)
T ss_pred HHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCe----EEEeEEEE-ECCEEEeEecCc----------cCCcccHHHH
Confidence 99999999999999999999999999999999854 33333222 245554442221 0123569999
Q ss_pred HHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEe
Q 044553 158 IERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVM 196 (275)
Q Consensus 158 l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~ 196 (275)
+++++.+++.. +++|++||||.||+.++..+|. ++++
T Consensus 253 L~~la~~lgi~-~~qtIaVGDg~NDl~m~~~AGl-giA~ 289 (322)
T PRK11133 253 LTRLAQEYEIP-LAQTVAIGDGANDLPMIKAAGL-GIAY 289 (322)
T ss_pred HHHHHHHcCCC-hhhEEEEECCHHHHHHHHHCCC-eEEe
Confidence 99999998865 5899999999999999977665 4444
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.4e-19 Score=144.61 Aligned_cols=167 Identities=27% Similarity=0.338 Sum_probs=115.0
Q ss_pred EEEEEcCCcccCCccHHHHHH-HhCCChHH----Hhhc-CCCChHHHHHHHHHHHHhCCCCHHHHHH-H-HhcCCCCCCH
Q 044553 5 VVIFDFDKTIIDCDSDNFVVD-ELGATDLF----NQLL-PTMPWNSLMDRMMKELHSQGKTIEDIVE-V-LKRIPIHPRV 76 (275)
Q Consensus 5 ~viFD~DGTL~d~~~~~~~~~-~~g~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~pg~ 76 (275)
+++|||||||++.++...+++ ..+..+.. .... +...+.+.+...+..+. +...+++.+ . .+.+.++||+
T Consensus 1 l~~fD~DgTl~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~ 78 (177)
T TIGR01488 1 LAIFDFDGTLTRQDSLIDLLAKLLGTNDEVIELTRLAPSGRISFEDALGRRLALLH--RSRSEEVAKEFLARQVALRPGA 78 (177)
T ss_pred CEEecCccccccchhhHHHHHHHhCChHHHHHHHHHHHCCCCCHHHHHHHHHHHhC--CCCHHHHHHHHHHhcCCcCcCH
Confidence 489999999999998554444 44442222 1222 23344555554444442 233345544 4 4568899999
Q ss_pred HHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHH
Q 044553 77 VPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGV 156 (275)
Q Consensus 77 ~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~ 156 (275)
.++++.++++|++++|+|++...+++.+++++|+..+ +++...++.+|...+++... .|+.+.+|..
T Consensus 79 ~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~----~~~~~~~~~~g~~~g~~~~~---------~~~~~~~K~~ 145 (177)
T TIGR01488 79 RELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDV----FANRLEFDDNGLLTGPIEGQ---------VNPEGECKGK 145 (177)
T ss_pred HHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchh----eeeeEEECCCCEEeCccCCc---------ccCCcchHHH
Confidence 9999999999999999999999999999999998754 44444444455544433220 1234577999
Q ss_pred HHHHHHHhhhcCCCCeEEEEcCCCCCccccc
Q 044553 157 VIERIQASLSKEGNKKIIYLGDGSGDYCPSL 187 (275)
Q Consensus 157 ~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~ 187 (275)
+++++..+.+.. +++++|||||.+|++++.
T Consensus 146 ~l~~~~~~~~~~-~~~~~~iGDs~~D~~~~~ 175 (177)
T TIGR01488 146 VLKELLEESKIT-LKKIIAVGDSVNDLPMLK 175 (177)
T ss_pred HHHHHHHHhCCC-HHHEEEEeCCHHHHHHHh
Confidence 999998876554 478999999999998874
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.4e-19 Score=147.18 Aligned_cols=163 Identities=15% Similarity=0.195 Sum_probs=107.5
Q ss_pred EEEEEcCCcccCCccH-----HHH-----HHHhCCChHHHhhcCCCCh---HHHHHHHHHHHHhCCCCHHHHHHHHh---
Q 044553 5 VVIFDFDKTIIDCDSD-----NFV-----VDELGATDLFNQLLPTMPW---NSLMDRMMKELHSQGKTIEDIVEVLK--- 68 (275)
Q Consensus 5 ~viFD~DGTL~d~~~~-----~~~-----~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--- 68 (275)
+|+||+||||+|+... ... .+.+|++......+....+ ...+..+... .....+++.+.+.
T Consensus 2 ~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~ 78 (184)
T TIGR01993 2 VWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSEEEARVLRKDYYREYGTTLAGLMIL---HEIDADEYLRYVHGRL 78 (184)
T ss_pred eEEEeCCCCCCCCcccHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHchHHHHHHHh---hCCCHHHHHHHHhccC
Confidence 7999999999999542 222 2355665332211110000 0111111111 1233444443332
Q ss_pred ---cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCC
Q 044553 69 ---RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGC 145 (275)
Q Consensus 69 ---~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~ 145 (275)
...++||+.++|++|+ ++++|+||++...+...++++|+.++|+.|++++.... +....||.|
T Consensus 79 ~~~~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~--~~~~~KP~p--------- 144 (184)
T TIGR01993 79 PYEKLKPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANP--DYLLPKPSP--------- 144 (184)
T ss_pred CHHhCCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccC--ccCCCCCCH---------
Confidence 3678999999999998 58999999999999999999999999999998765320 000125544
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeE
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHV 195 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~ 195 (275)
+.++.++.+++.. |++++||||+..|+.+|+++|...++
T Consensus 145 ----------~~~~~~~~~~~~~-~~~~l~vgD~~~di~aA~~~G~~~i~ 183 (184)
T TIGR01993 145 ----------QAYEKALREAGVD-PERAIFFDDSARNIAAAKALGMKTVL 183 (184)
T ss_pred ----------HHHHHHHHHhCCC-ccceEEEeCCHHHHHHHHHcCCEEee
Confidence 6777777777655 58999999999999999988876543
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.3e-19 Score=151.85 Aligned_cols=128 Identities=16% Similarity=0.148 Sum_probs=93.1
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCc
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNL 147 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~ 147 (275)
..+.++||+.++|+.|++. ++++|+||++.. +++.|+.++|+.|++++... ..||.|
T Consensus 110 ~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~------~~KP~p----------- 166 (238)
T PRK10748 110 SRIDVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHG------RSKPFS----------- 166 (238)
T ss_pred hcCCCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeEecccCC------cCCCcH-----------
Confidence 4588999999999999975 999999998764 47889999999999876531 346654
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHH
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEE 226 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e 226 (275)
.++..++.+++.. +++|+||||+ .+|+.+|+++|+..+++.+.+.+. ....+....+ ....+++.|
T Consensus 167 --------~~~~~a~~~~~~~-~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~---~~~~~~~~~p-~~~i~~l~e 233 (238)
T PRK10748 167 --------DMYHLAAEKLNVP-IGEILHVGDDLTTDVAGAIRCGMQACWINPENGDL---MQTWDSRLLP-HIEISRLAS 233 (238)
T ss_pred --------HHHHHHHHHcCCC-hhHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccc---cccccccCCC-CEEECCHHH
Confidence 6777777776654 5899999999 599999999999888776654321 1111110111 235788888
Q ss_pred HHHHH
Q 044553 227 LEQIL 231 (275)
Q Consensus 227 l~~~l 231 (275)
|.++|
T Consensus 234 l~~~~ 238 (238)
T PRK10748 234 LTSLI 238 (238)
T ss_pred HHhhC
Confidence 87653
|
|
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.3e-18 Score=146.00 Aligned_cols=130 Identities=21% Similarity=0.217 Sum_probs=104.8
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCP 149 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~ 149 (275)
.+++|++.++|+.|+.+ ++++|+||+....+...++++|+.++||.|++++.. | ..||+|
T Consensus 98 ~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~----g--~~KP~~------------- 157 (229)
T COG1011 98 LPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDV----G--VAKPDP------------- 157 (229)
T ss_pred CccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEeccc----c--cCCCCc-------------
Confidence 89999999999999999 999999999999999999999999999999987753 1 457766
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHH
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELE 228 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~ 228 (275)
++++.++...+.. |++++||||+ .+||.+|+++|+..+++.+.+... ......+ .....++.++.
T Consensus 158 ------~~f~~~~~~~g~~-p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~----~~~~~~~---~~~i~~l~~l~ 223 (229)
T COG1011 158 ------EIFEYALEKLGVP-PEEALFVGDSLENDILGARALGMKTVWINRGGKPL----PDALEAP---DYEISSLAELL 223 (229)
T ss_pred ------HHHHHHHHHcCCC-cceEEEECCChhhhhHHHHhcCcEEEEECCCCCCC----CCCccCC---ceEEcCHHHHH
Confidence 7888888888766 5899999999 678899999999999888765432 0111112 33578888888
Q ss_pred HHHHH
Q 044553 229 QILLH 233 (275)
Q Consensus 229 ~~l~~ 233 (275)
+.+..
T Consensus 224 ~~~~~ 228 (229)
T COG1011 224 DLLER 228 (229)
T ss_pred HHHhh
Confidence 77653
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.3e-18 Score=143.25 Aligned_cols=167 Identities=11% Similarity=0.187 Sum_probs=111.8
Q ss_pred eEEEEEcCCcccCCccHHHH--HHH-hCCCh------------HHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHh
Q 044553 4 IVVIFDFDKTIIDCDSDNFV--VDE-LGATD------------LFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLK 68 (275)
Q Consensus 4 ~~viFD~DGTL~d~~~~~~~--~~~-~g~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (275)
.+|+||+||||++.+....+ +.. .+.+. +.....+.....+....+.+... ...+.+++...+.
T Consensus 1 ~~viFDldgvL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 79 (199)
T PRK09456 1 MLYIFDLGNVIVDIDFNRVLGVWSDLSRVPLATLKKRFTMGEAFHQHERGEISDEAFAEALCHEMA-LSLSYEQFAHGWQ 79 (199)
T ss_pred CEEEEeCCCccccCcHHHHHHHHHHhcCCCHHHHHHHHhcCcHHHHHhcCCCCHHHHHHHHHHHhC-CCCCHHHHHHHHH
Confidence 37999999999998652211 111 12210 11111122333344444444332 2334444443332
Q ss_pred c--CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHH-cCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCC
Q 044553 69 R--IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEH-LGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGC 145 (275)
Q Consensus 69 ~--~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~-~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~ 145 (275)
. ..++||+.++|+.|+++|++++|+||++...+...+.. .++..+|+.+++++... ..||+|
T Consensus 80 ~~~~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~------~~KP~p--------- 144 (199)
T PRK09456 80 AVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLG------MRKPEA--------- 144 (199)
T ss_pred HHHhccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccC------CCCCCH---------
Confidence 2 46899999999999999999999999998877766655 47888999998876532 347755
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEee
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMP 197 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~ 197 (275)
++++.++.+++.. |++|+||||+..|+.+|+++|+..+.+.
T Consensus 145 ----------~~~~~~~~~~~~~-p~~~l~vgD~~~di~aA~~aG~~~i~~~ 185 (199)
T PRK09456 145 ----------RIYQHVLQAEGFS-AADAVFFDDNADNIEAANALGITSILVT 185 (199)
T ss_pred ----------HHHHHHHHHcCCC-hhHeEEeCCCHHHHHHHHHcCCEEEEec
Confidence 6777777777665 5899999999999999999888766554
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.4e-19 Score=153.27 Aligned_cols=126 Identities=13% Similarity=0.064 Sum_probs=89.2
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcc--eEecCCCccCCCCceeecccCCCCCCCCCCCc
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFS--EINTNPGFVDEEGRLRIFPFHDFTKCSHGCNL 147 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd--~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~ 147 (275)
+.++||+.++|+.|+++|++++|+||++...+..+++.++...+|+ .+++++.. ...||.|
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~------~~~KP~p----------- 205 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDV------PKKKPDP----------- 205 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEecccc------CCCCCCH-----------
Confidence 5899999999999999999999999999999999998874334443 12243321 1346655
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHH
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEEL 227 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el 227 (275)
.++..++..++.. |++|+||||+.+|+.+|+++|+..+.+..+......+ ..+ ...++++.++
T Consensus 206 --------~~~~~a~~~~~~~-p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l-------~~a-d~vi~~~~~l 268 (286)
T PLN02779 206 --------DIYNLAAETLGVD-PSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDF-------SGA-DAVFDCLGDV 268 (286)
T ss_pred --------HHHHHHHHHhCcC-hHHEEEEeCCHHhHHHHHHcCCEEEEEccCCcccccc-------CCC-cEEECChhhc
Confidence 6677777777655 5899999999999999999998766554332222222 112 2356777776
Q ss_pred HH
Q 044553 228 EQ 229 (275)
Q Consensus 228 ~~ 229 (275)
..
T Consensus 269 ~~ 270 (286)
T PLN02779 269 PL 270 (286)
T ss_pred ch
Confidence 54
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.6e-20 Score=146.76 Aligned_cols=164 Identities=23% Similarity=0.299 Sum_probs=117.2
Q ss_pred EEEEcCCcccCCccH-----HH-HHHHhCCChHHHhhc--CCCChHHHHHHHHHHHHhCCCC-HHHHHHH--HhcCCCCC
Q 044553 6 VIFDFDKTIIDCDSD-----NF-VVDELGATDLFNQLL--PTMPWNSLMDRMMKELHSQGKT-IEDIVEV--LKRIPIHP 74 (275)
Q Consensus 6 viFD~DGTL~d~~~~-----~~-~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~p 74 (275)
|+||+||||+++... .. +++.++.+....... ........+..++......... .+.+.+. .....++|
T Consensus 1 iifD~dgtL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPAIFRALQRLALEEFGLEISAEELRELFGKSYEEALERLLERFGIDPEEIQELFREYNLESKLQPYP 80 (176)
T ss_dssp EEEESBTTTEEHHHHHHHHHHHHHHHHTTHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGEEEST
T ss_pred cEEECCCCcEeCHHHHHHHHHHHHHHHhCCCCCHHHHHHHhCCCHHHHHHHhhhccchhHHHHHHHhhhhhhhhccchhh
Confidence 799999999998762 22 355666542222221 2233344455554443221101 1222332 35789999
Q ss_pred CHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCch
Q 044553 75 RVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCK 154 (275)
Q Consensus 75 g~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K 154 (275)
|+.++|+.|+++|++++++||++...++..++++|+..+|+.+++.+... ..||.
T Consensus 81 ~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~------~~Kp~------------------- 135 (176)
T PF13419_consen 81 GVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVG------SRKPD------------------- 135 (176)
T ss_dssp THHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSS------SSTTS-------------------
T ss_pred hhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhh------hhhhH-------------------
Confidence 99999999999999999999999999999999999999999999876431 23554
Q ss_pred HHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeE
Q 044553 155 GVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHV 195 (275)
Q Consensus 155 ~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~ 195 (275)
...++.++.+++.. |++|++|||+..|+.+|+.+|+..++
T Consensus 136 ~~~~~~~~~~~~~~-p~~~~~vgD~~~d~~~A~~~G~~~i~ 175 (176)
T PF13419_consen 136 PDAYRRALEKLGIP-PEEILFVGDSPSDVEAAKEAGIKTIW 175 (176)
T ss_dssp HHHHHHHHHHHTSS-GGGEEEEESSHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHcCCC-cceEEEEeCCHHHHHHHHHcCCeEEe
Confidence 47788888888765 58999999999999999998886654
|
... |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=99.79 E-value=8.1e-19 Score=144.28 Aligned_cols=90 Identities=13% Similarity=0.003 Sum_probs=74.7
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCC
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPN 151 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~ 151 (275)
+.+++.++|+.|++.|++++|+||++...++.+++++|+..+|+.+++.+... . ||.|
T Consensus 107 ~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~------~-KP~p--------------- 164 (197)
T TIGR01548 107 TLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCP------P-KPNP--------------- 164 (197)
T ss_pred cccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCC------C-CcCH---------------
Confidence 44556999999999999999999999999999999999999999998876532 2 6655
Q ss_pred CchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccc
Q 044553 152 MCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLK 188 (275)
Q Consensus 152 ~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~ 188 (275)
+.+...+.+++.. +++|+||||+.+|+.+|++
T Consensus 165 ----~~~~~~~~~~~~~-~~~~i~vGD~~~Di~aA~~ 196 (197)
T TIGR01548 165 ----EPLILAAKALGVE-ACHAAMVGDTVDDIITGRK 196 (197)
T ss_pred ----HHHHHHHHHhCcC-cccEEEEeCCHHHHHHHHh
Confidence 5566666666654 5799999999999998854
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.2e-18 Score=144.64 Aligned_cols=104 Identities=15% Similarity=0.103 Sum_probs=80.4
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHH--HHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCC
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDANLFF--IETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCN 146 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~--i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~ 146 (275)
...++||+.++|+.|+++|++++|+||+.... ....+...++..+|+.|++++... ..||+|
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~------~~KP~p---------- 155 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEG------LRKPDP---------- 155 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecC------CCCCCH----------
Confidence 47799999999999999999999999986543 333444568889999988765321 347766
Q ss_pred cCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeec
Q 044553 147 LCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPR 198 (275)
Q Consensus 147 ~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~ 198 (275)
.+++.++.+++.. |++|+||||+..|+.+|+++|+..+.+.+
T Consensus 156 ---------~~~~~~~~~~g~~-~~~~l~i~D~~~di~aA~~aG~~~i~v~~ 197 (211)
T TIGR02247 156 ---------RIYQLMLERLGVA-PEECVFLDDLGSNLKPAAALGITTIKVSD 197 (211)
T ss_pred ---------HHHHHHHHHcCCC-HHHeEEEcCCHHHHHHHHHcCCEEEEECC
Confidence 5666777777654 58999999999999999998886665543
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.1e-18 Score=172.05 Aligned_cols=194 Identities=13% Similarity=0.109 Sum_probs=132.1
Q ss_pred CceEEEEEcCCcccCCccH-----HHHHHHhCCChHHHhhc--CCCChHHHHHHHHHHHHhCCCCHH----HHH----HH
Q 044553 2 SGIVVIFDFDKTIIDCDSD-----NFVVDELGATDLFNQLL--PTMPWNSLMDRMMKELHSQGKTIE----DIV----EV 66 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~~-----~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~----~~~----~~ 66 (275)
.+++|+|||||||+|+... ..+++++|++....... .+......+..+.......+...+ ++. +.
T Consensus 74 ~ikaVIFDlDGTLiDS~~~~~~a~~~~~~~~G~~it~e~~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 153 (1057)
T PLN02919 74 KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFVPFMGTGEANFLGGVASVKGVKGFDPDAAKKRFFEIYLEK 153 (1057)
T ss_pred CCCEEEECCCCCeEeChHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence 4689999999999999653 56778888763222221 122223333322221111112211 111 11
Q ss_pred Hh---cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc-CCcceEecCCCccCCCCceeecccCCCCCCC
Q 044553 67 LK---RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR-DCFSEINTNPGFVDEEGRLRIFPFHDFTKCS 142 (275)
Q Consensus 67 ~~---~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~-~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~ 142 (275)
+. ...++||+.++|++|+++|++++|+||+....++..++++|+. .+|+.+++.+... ..||.|
T Consensus 154 ~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~------~~KP~P------ 221 (1057)
T PLN02919 154 YAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFE------NLKPAP------ 221 (1057)
T ss_pred hhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccc------cCCCCH------
Confidence 11 1247999999999999999999999999999999999999996 7899999877532 457755
Q ss_pred CCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCC
Q 044553 143 HGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWT 222 (275)
Q Consensus 143 ~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 222 (275)
+++..++.+++.. |++|+||||+..|+.+|+++|+..+++.. ++...++....+ ...++
T Consensus 222 -------------e~~~~a~~~lgv~-p~e~v~IgDs~~Di~AA~~aGm~~I~v~~-~~~~~~L~~~~a------~~vi~ 280 (1057)
T PLN02919 222 -------------DIFLAAAKILGVP-TSECVVIEDALAGVQAARAAGMRCIAVTT-TLSEEILKDAGP------SLIRK 280 (1057)
T ss_pred -------------HHHHHHHHHcCcC-cccEEEEcCCHHHHHHHHHcCCEEEEECC-CCCHHHHhhCCC------CEEEC
Confidence 6677777777665 58999999999999999999987666654 444455544332 22578
Q ss_pred ChHHHH
Q 044553 223 DGEELE 228 (275)
Q Consensus 223 ~~~el~ 228 (275)
++.++.
T Consensus 281 ~l~el~ 286 (1057)
T PLN02919 281 DIGNIS 286 (1057)
T ss_pred ChHHCC
Confidence 888874
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.9e-18 Score=141.18 Aligned_cols=176 Identities=19% Similarity=0.257 Sum_probs=129.1
Q ss_pred CceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhc-----CCCChHHHHHHHHHHHHhCCCCHHHHHHHHhc-CCCCCC
Q 044553 2 SGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLL-----PTMPWNSLMDRMMKELHSQGKTIEDIVEVLKR-IPIHPR 75 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~pg 75 (275)
++++++||+||||++...+..+....|......... ....+...++.....+ .+.+.+.+.+..++ +.++||
T Consensus 4 ~~~L~vFD~D~TLi~~~~~~~~~~~~g~~~~v~~~t~~~~~~~~~~~~~~~~~v~~l--~g~~~~~v~~~~~~~~~l~~g 81 (212)
T COG0560 4 MKKLAVFDLDGTLINAELIDELARGAGVGEEVLAITERAMRGELDFEESLRLRVALL--KGLPVEVLEEVREEFLRLTPG 81 (212)
T ss_pred ccceEEEecccchhhHHHHHHHHHHhCCHHHHHHHHHHHhcccccHHHHHHHHHHHh--CCCCHHHHHHHHHhcCcCCcc
Confidence 578999999999999877888888888865433221 1223344444333333 46778888888888 999999
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchH
Q 044553 76 VVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKG 155 (275)
Q Consensus 76 ~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~ 155 (275)
+.+++++|++.|++++|+|++....++++.+.+|++..+. +...... |.+.++.... .| .+.+|.
T Consensus 82 a~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~a----n~l~~~d-G~ltG~v~g~------~~----~~~~K~ 146 (212)
T COG0560 82 AEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVA----NELEIDD-GKLTGRVVGP------IC----DGEGKA 146 (212)
T ss_pred HHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchhee----eEEEEeC-CEEeceeeee------ec----CcchHH
Confidence 9999999999999999999999999999999999875544 4333322 4444433221 01 124599
Q ss_pred HHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEe
Q 044553 156 VVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVM 196 (275)
Q Consensus 156 ~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~ 196 (275)
..++++...++.. +++++++|||.||+.+-..+|. .+++
T Consensus 147 ~~l~~~~~~~g~~-~~~~~a~gDs~nDlpml~~ag~-~ia~ 185 (212)
T COG0560 147 KALRELAAELGIP-LEETVAYGDSANDLPMLEAAGL-PIAV 185 (212)
T ss_pred HHHHHHHHHcCCC-HHHeEEEcCchhhHHHHHhCCC-CeEe
Confidence 9999999988775 4799999999999988866554 3443
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.8e-19 Score=141.60 Aligned_cols=99 Identities=15% Similarity=0.191 Sum_probs=81.4
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCP 149 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~ 149 (275)
.+++||+.++|++|+++|++++|+||+.... ..++.++|+..+|+.+++++... ..||+|
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~------~~KP~~------------- 143 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVG------RGKPDP------------- 143 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCC------CCCCCH-------------
Confidence 6899999999999999999999999999888 66666799999999988765421 346655
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeE
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHV 195 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~ 195 (275)
..++.++.+++.. |++|+||||+..|+.+|+++|+..++
T Consensus 144 ------~~~~~~~~~~~~~-~~~~~~vgD~~~di~aA~~~G~~~i~ 182 (183)
T TIGR01509 144 ------DIYLLALKKLGLK-PEECLFVDDSPAGIEAAKAAGMHTVL 182 (183)
T ss_pred ------HHHHHHHHHcCCC-cceEEEEcCCHHHHHHHHHcCCEEEe
Confidence 6667777777665 58999999999999999888875543
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.7e-18 Score=136.59 Aligned_cols=149 Identities=18% Similarity=0.212 Sum_probs=102.7
Q ss_pred EEEEEcCCcccCCcc-----HHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHH
Q 044553 5 VVIFDFDKTIIDCDS-----DNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPA 79 (275)
Q Consensus 5 ~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~ 79 (275)
+|+||+||||+|+.. +..+++++|.....-....+..... +..... ..+++..+......+||+.++
T Consensus 1 ~iifD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~-------~~~~~~~~~~~~~~~~g~~e~ 72 (154)
T TIGR01549 1 AILFDIDGTLVDSSFAIRRAFEETLEEFGEDFQALKALRGLAEEL-LYRIAT-------SFEELLGYDAEEAYIRGAADL 72 (154)
T ss_pred CeEecCCCcccccHHHHHHHHHHHHHHhcccHHHHHHHHccChHH-HHHHHH-------HHHHHhCcchhheeccCHHHH
Confidence 489999999999953 3556666775321111111111111 111111 122222223355678999999
Q ss_pred HHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHHH
Q 044553 80 IKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIE 159 (275)
Q Consensus 80 L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~ 159 (275)
|+.|+++|++++|+||+....+...++.+ +..+|+.+++.+.. ..||.| ..+.
T Consensus 73 l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~-------~~Kp~~-------------------~~~~ 125 (154)
T TIGR01549 73 LKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEF-------GAKPEP-------------------EIFL 125 (154)
T ss_pred HHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCC-------CCCcCH-------------------HHHH
Confidence 99999999999999999999999999987 88899988876542 246544 6777
Q ss_pred HHHHhhhcCCCCeEEEEcCCCCCcccccccC
Q 044553 160 RIQASLSKEGNKKIIYLGDGSGDYCPSLKLS 190 (275)
Q Consensus 160 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~ 190 (275)
.++.+++.. + +|+||||+..|+.+|+++|
T Consensus 126 ~~~~~~~~~-~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 126 AALESLGLP-P-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHcCCC-C-CEEEEeCCHHHHHHHHHcc
Confidence 888877665 5 8999999999999987654
|
HAD subfamilies caused by an overly broad single model. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.7e-17 Score=128.00 Aligned_cols=166 Identities=20% Similarity=0.272 Sum_probs=129.1
Q ss_pred ceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhc-----CCCChHHHHHHHHHHHHhCCCCHHHHHHHH--hcCCCCCC
Q 044553 3 GIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLL-----PTMPWNSLMDRMMKELHSQGKTIEDIVEVL--KRIPIHPR 75 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~pg 75 (275)
.++|+||+|-|++..+.+..+....|.......+. +...+.+.++.-+..+. ...+++.++. +.+.+.||
T Consensus 16 ~~aVcFDvDSTvi~eEgIdelA~~~G~~~~Va~~T~rAMng~~~F~eaL~~Rl~llq---p~~~qv~~~v~~~k~~lT~G 92 (227)
T KOG1615|consen 16 ADAVCFDVDSTVIQEEGIDELAAYCGVGEAVAEVTRRAMNGEADFQEALAARLSLLQ---PLQVQVEQFVIKQKPTLTPG 92 (227)
T ss_pred cCeEEEecCcchhHHhhHHHHHHHhCchHHHHHHHHHHhCCCCcHHHHHHHHHHHhc---ccHHHHHHHHhcCCCccCCC
Confidence 57999999999999999999999999876544332 23456666655555443 3444444443 35889999
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceee-cccCCCCCCCCCCCcCCCCCch
Q 044553 76 VVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRI-FPFHDFTKCSHGCNLCPPNMCK 154 (275)
Q Consensus 76 ~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~-kp~~~~~~~~~~~~~~~~~~~K 154 (275)
++++.+.|+++|..++++|++...++..+...+|++ +..+++|...++.+|++.+ +-.. +. ..+.||
T Consensus 93 i~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~--~~n~yAN~l~fd~~Gk~~gfd~~~-----pt-----sdsggK 160 (227)
T KOG1615|consen 93 IRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIP--KSNIYANELLFDKDGKYLGFDTNE-----PT-----SDSGGK 160 (227)
T ss_pred HHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCc--HhhhhhheeeeccCCcccccccCC-----cc-----ccCCcc
Confidence 999999999999999999999999999999999997 4568899988988887766 3221 11 234679
Q ss_pred HHHHHHHHHhhhcCCCCeEEEEcCCCCCcccc
Q 044553 155 GVVIERIQASLSKEGNKKIIYLGDGSGDYCPS 186 (275)
Q Consensus 155 ~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a 186 (275)
.+++..+.+.+ +.+.++||||+.+|+.+.
T Consensus 161 a~~i~~lrk~~---~~~~~~mvGDGatDlea~ 189 (227)
T KOG1615|consen 161 AEVIALLRKNY---NYKTIVMVGDGATDLEAM 189 (227)
T ss_pred HHHHHHHHhCC---ChheeEEecCCccccccC
Confidence 99999998854 357999999999999766
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-17 Score=139.83 Aligned_cols=145 Identities=12% Similarity=0.012 Sum_probs=97.6
Q ss_pred eEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHH-hcCCCCCCHHHHHHH
Q 044553 4 IVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVL-KRIPIHPRVVPAIKS 82 (275)
Q Consensus 4 ~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pg~~e~L~~ 82 (275)
.+|+||+||||+|+.+.. .+|.+......+........++.+ .+.. ....+++++.++|++
T Consensus 64 ~aViFDlDgTLlDSs~~~----~~G~~~~s~~~~~~l~g~~~w~~~--------------~~~~~~~s~p~~~a~elL~~ 125 (237)
T TIGR01672 64 IAVSFDIDDTVLFSSPGF----WRGKKTFSPGSEDYLKNQVFWEKV--------------NNGWDEFSIPKEVARQLIDM 125 (237)
T ss_pred eEEEEeCCCccccCcHHH----hCCcccCCHHHhhhhcChHHHHHH--------------HHhcccCCcchhHHHHHHHH
Confidence 399999999999998754 255442211111111111111111 1111 335677789999999
Q ss_pred HHHcCCcEEEEeCC----CHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHH
Q 044553 83 AHALGCELRIVSDA----NLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVI 158 (275)
Q Consensus 83 L~~~g~~~~IvS~~----~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l 158 (275)
|+++|++++++||+ ....++.+++++|+..+|+.+++.+... ..||.+ .
T Consensus 126 l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~------~~Kp~~------------------~--- 178 (237)
T TIGR01672 126 HQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPG------QYQYTK------------------T--- 178 (237)
T ss_pred HHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCC------CCCCCH------------------H---
Confidence 99999999999998 7778999999999999999888766531 123322 1
Q ss_pred HHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 159 ERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 159 ~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
.++.++ .-++||||+.+|+.+|+++|...+.+.++
T Consensus 179 -~~l~~~-----~i~i~vGDs~~DI~aAk~AGi~~I~V~~g 213 (237)
T TIGR01672 179 -QWIQDK-----NIRIHYGDSDNDITAAKEAGARGIRILRA 213 (237)
T ss_pred -HHHHhC-----CCeEEEeCCHHHHHHHHHCCCCEEEEEec
Confidence 223332 34899999999999999988877776543
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=99.73 E-value=8.1e-18 Score=138.28 Aligned_cols=181 Identities=8% Similarity=0.070 Sum_probs=111.9
Q ss_pred ceEEEEEcCCcccCCcc-HHHHHHHhCCChH-HHhhcCCCChHHHHHHHHHHHHhCCCCHHH----HH--HHHhcCCCCC
Q 044553 3 GIVVIFDFDKTIIDCDS-DNFVVDELGATDL-FNQLLPTMPWNSLMDRMMKELHSQGKTIED----IV--EVLKRIPIHP 74 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~-~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~p 74 (275)
+++|+||+||||+|... +..+++++|++.. .....+.... ..+...+. ......++ +. .......++|
T Consensus 2 ~k~viFDlDGTLiD~~~~~~~~~~~~g~~~~~~~~~~g~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p 77 (197)
T PHA02597 2 KPTILTDVDGVLLSWQSGLPYFAQKYNIPTDHILKMIQDERF-RDPGELFG---CDQELAKKLIEKYNNSDFIRYLSAYD 77 (197)
T ss_pred CcEEEEecCCceEchhhccHHHHHhcCCCHHHHHHHHhHhhh-cCHHHHhc---ccHHHHHHHhhhhhHHHHHHhccCCC
Confidence 58999999999999643 4567788887632 1111111000 00111110 00000011 11 1234577999
Q ss_pred CHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCC----cceEecCCCccCCCCceeecccCCCCCCCCCCCcCCC
Q 044553 75 RVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDC----FSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPP 150 (275)
Q Consensus 75 g~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~----fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~ 150 (275)
|+.++|++|++. ++++++||+........++.+++..+ |+.+++.+.. ||
T Consensus 78 G~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~---------~~---------------- 131 (197)
T PHA02597 78 DALDVINKLKED-YDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHD---------ES---------------- 131 (197)
T ss_pred CHHHHHHHHHhc-CCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccC---------cc----------------
Confidence 999999999987 57888999877666667777777654 4556654431 22
Q ss_pred CCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCccccccc--CCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHH
Q 044553 151 NMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKL--SEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELE 228 (275)
Q Consensus 151 ~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~ 228 (275)
|.+.+..++.+++ +++++||||+.+|+.+|+++ |...+.+. +++. +..+.. .+.+.++.|+.
T Consensus 132 ---kp~~~~~a~~~~~---~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~-~~~~--------~~~~~~-~~~~~~~~~~~ 195 (197)
T PHA02597 132 ---KEKLFIKAKEKYG---DRVVCFVDDLAHNLDAAHEALSQLPVIHML-RGER--------DHIPKL-AHRVKSWNDIE 195 (197)
T ss_pred ---cHHHHHHHHHHhC---CCcEEEeCCCHHHHHHHHHHHcCCcEEEec-chhh--------ccccch-hhhhccHHHHh
Confidence 4477778888776 47899999999999999998 88766653 3331 111222 34677787775
Q ss_pred H
Q 044553 229 Q 229 (275)
Q Consensus 229 ~ 229 (275)
.
T Consensus 196 ~ 196 (197)
T PHA02597 196 N 196 (197)
T ss_pred c
Confidence 3
|
2 hypothetical protein; Provisional |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.7e-17 Score=134.69 Aligned_cols=138 Identities=14% Similarity=0.044 Sum_probs=92.9
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCH---------------HHHHHHHHHcCCcCCcceEecCCCccCCCCceee
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANL---------------FFIETILEHLGIRDCFSEINTNPGFVDEEGRLRI 132 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~---------------~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~ 132 (275)
....++||+.++|++|+++|++++|+||++. ..+...++++|+ .|+.++.+..... +.....
T Consensus 26 ~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~-~~~~~~ 102 (181)
T PRK08942 26 DEWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPE-DGCDCR 102 (181)
T ss_pred HHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCC-CCCcCC
Confidence 3467899999999999999999999999863 345566777777 3777665432110 011134
Q ss_pred cccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCC
Q 044553 133 FPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPM 212 (275)
Q Consensus 133 kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~ 212 (275)
||+| ..+..++..++.. +++|+||||+.+|+.+|+++|+..+. ...++....+....+.
T Consensus 103 KP~p-------------------~~~~~~~~~l~~~-~~~~~~VgDs~~Di~~A~~aG~~~i~-v~~g~~~~~~~~~~~~ 161 (181)
T PRK08942 103 KPKP-------------------GMLLSIAERLNID-LAGSPMVGDSLRDLQAAAAAGVTPVL-VRTGKGVTTLAEGAAP 161 (181)
T ss_pred CCCH-------------------HHHHHHHHHcCCC-hhhEEEEeCCHHHHHHHHHCCCeEEE-EcCCCCchhhhcccCC
Confidence 6655 6677777777654 58999999999999999999985444 4455432222221110
Q ss_pred ceeEEEeeCCChHHHHHHHHH
Q 044553 213 LIKAEIHEWTDGEELEQILLH 233 (275)
Q Consensus 213 ~~~~~~~~~~~~~el~~~l~~ 233 (275)
. ...++++.++.+++.+
T Consensus 162 ---~-~~ii~~l~el~~~l~~ 178 (181)
T PRK08942 162 ---G-TWVLDSLADLPQALKK 178 (181)
T ss_pred ---C-ceeecCHHHHHHHHHh
Confidence 0 1257899998887653
|
|
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.2e-17 Score=134.65 Aligned_cols=93 Identities=16% Similarity=0.227 Sum_probs=75.5
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCC
Q 044553 63 IVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCS 142 (275)
Q Consensus 63 ~~~~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~ 142 (275)
+.+.+....++||+.++|+ +++|+||++...++..++++|+..+|+.|++++... ..||.|
T Consensus 82 ~~~~~~~~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~------~~KP~p------ 142 (175)
T TIGR01493 82 LRDAYKNLPPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVR------AYKPDP------ 142 (175)
T ss_pred HHHHHhcCCCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcC------CCCCCH------
Confidence 3344567889999999998 488999999999999999999999999988877431 357766
Q ss_pred CCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccc
Q 044553 143 HGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLK 188 (275)
Q Consensus 143 ~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~ 188 (275)
+++..++.+++.. |++|+||||+.+|+.+|++
T Consensus 143 -------------~~f~~~~~~~~~~-p~~~l~vgD~~~Di~~A~~ 174 (175)
T TIGR01493 143 -------------VVYELVFDTVGLP-PDRVLMVAAHQWDLIGARK 174 (175)
T ss_pred -------------HHHHHHHHHHCCC-HHHeEeEecChhhHHHHhc
Confidence 5666777776654 5899999999999998854
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.72 E-value=2e-17 Score=133.55 Aligned_cols=133 Identities=14% Similarity=0.111 Sum_probs=90.6
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCH---------------HHHHHHHHHcCCcCCcceEecCCCccCCC-----
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANL---------------FFIETILEHLGIRDCFSEINTNPGFVDEE----- 127 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~---------------~~i~~~l~~~gl~~~fd~i~~~~~~~~~~----- 127 (275)
.++.++||+.++|++|+++|++++|+||++. ..+...++++++. |+.++.+.......
T Consensus 23 ~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~~~~~~~~~ 100 (176)
T TIGR00213 23 DNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHPEGVEEFRQ 100 (176)
T ss_pred HHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCCcccccccC
Confidence 3577899999999999999999999999884 3455677777776 67665443211110
Q ss_pred CceeecccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHH
Q 044553 128 GRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLI 207 (275)
Q Consensus 128 g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~ 207 (275)
.....|| +...+..++.+++.. +++|+||||+.+|+.+|+++|...+..+.+++......
T Consensus 101 ~~~~~KP-------------------~p~~~~~a~~~~~~~-~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~ 160 (176)
T TIGR00213 101 VCDCRKP-------------------KPGMLLQARKELHID-MAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEA 160 (176)
T ss_pred CCCCCCC-------------------CHHHHHHHHHHcCcC-hhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccc
Confidence 0112344 457788888887765 58999999999999999999987644555554321111
Q ss_pred hhCCCceeEEEeeCCChHHHH
Q 044553 208 IRNPMLIKAEIHEWTDGEELE 228 (275)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~el~ 228 (275)
.. .+ ...++++.||.
T Consensus 161 ~~-----~a-d~~i~~~~el~ 175 (176)
T TIGR00213 161 EN-----IA-DWVLNSLADLP 175 (176)
T ss_pred cc-----cC-CEEeccHHHhh
Confidence 11 11 33678888875
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.1e-16 Score=131.87 Aligned_cols=171 Identities=17% Similarity=0.160 Sum_probs=111.0
Q ss_pred EEEEEcCCcccCCccHHHHHHHh-C---CC--hHH-------HhhcC-CCChHHHHHHHHHHHHhCCCCHHHHHHHHhc-
Q 044553 5 VVIFDFDKTIIDCDSDNFVVDEL-G---AT--DLF-------NQLLP-TMPWNSLMDRMMKELHSQGKTIEDIVEVLKR- 69 (275)
Q Consensus 5 ~viFD~DGTL~d~~~~~~~~~~~-g---~~--~~~-------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 69 (275)
+++||+||||++.++....+... + .. ... ..... ..........+.... -.+.+.+++....++
T Consensus 1 ~a~FD~DgTL~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~l~~~~~~~ 79 (202)
T TIGR01490 1 LAFFDFDGTLTAKDTLFIFLKFLASKNILFEELRLPKVLARFEFFLNRGLDYMAYYRAFALDA-LAGLLEEDVRAIVEEF 79 (202)
T ss_pred CeEEccCCCCCCCchHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHH-HcCCCHHHHHHHHHHH
Confidence 47999999999998853332221 1 11 000 01111 111112222222211 236666665443322
Q ss_pred ------CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCC
Q 044553 70 ------IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSH 143 (275)
Q Consensus 70 ------~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~ 143 (275)
..++|++.++|+.++++|++++|+|++....++.+++++|++.+| +++..++.+|.+.+++... .
T Consensus 80 ~~~~~~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~----~~~l~~~~~g~~~g~~~~~-----~ 150 (202)
T TIGR01490 80 VNQKIESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAI----GTRLEESEDGIYTGNIDGN-----N 150 (202)
T ss_pred HHHHHHHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceE----ecceEEcCCCEEeCCccCC-----C
Confidence 468999999999999999999999999999999999999987544 4433333456667765421 0
Q ss_pred CCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 144 GCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 144 ~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
| .+..|...+++++.+.+.. +++|+++|||.+|+.++..++.
T Consensus 151 ----~-~g~~K~~~l~~~~~~~~~~-~~~~~~~gDs~~D~~~~~~a~~ 192 (202)
T TIGR01490 151 ----C-KGEGKVHALAELLAEEQID-LKDSYAYGDSISDLPLLSLVGH 192 (202)
T ss_pred ----C-CChHHHHHHHHHHHHcCCC-HHHcEeeeCCcccHHHHHhCCC
Confidence 1 1345888899988876654 4799999999999998876654
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=99.71 E-value=2e-16 Score=132.26 Aligned_cols=164 Identities=11% Similarity=0.119 Sum_probs=109.7
Q ss_pred cCCcccCCcc-----HHHHHHHhCCChHHHhh--cCCCChHHHHHHHHHHHHhC-CCCHHHHH--------HHHhcCCCC
Q 044553 10 FDKTIIDCDS-----DNFVVDELGATDLFNQL--LPTMPWNSLMDRMMKELHSQ-GKTIEDIV--------EVLKRIPIH 73 (275)
Q Consensus 10 ~DGTL~d~~~-----~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--------~~~~~~~~~ 73 (275)
|||||+|+.. +..+++++|.+...... ..+.........+....... ....+++. .......++
T Consensus 1 ~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQEKILARYGKTFDWSLKAKMMGKKAIEAARIFVEESGLSDSLSPEDFLVEREAMLQDLFPTSDLM 80 (220)
T ss_pred CCCcceecHHHHHHHHHHHHHHcCCCCCHHHHHHccCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhhCCCC
Confidence 7999999965 35677888876322211 12223333444443332211 11222221 223467899
Q ss_pred CCHHHHHHHHHHcCCcEEEEeCCCHHHHHH-HHHHcCCcCCcceEecCC--CccCCCCceeecccCCCCCCCCCCCcCCC
Q 044553 74 PRVVPAIKSAHALGCELRIVSDANLFFIET-ILEHLGIRDCFSEINTNP--GFVDEEGRLRIFPFHDFTKCSHGCNLCPP 150 (275)
Q Consensus 74 pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~-~l~~~gl~~~fd~i~~~~--~~~~~~g~~~~kp~~~~~~~~~~~~~~~~ 150 (275)
||+.++|+.|+++|++++|+||+....+.. .++..++..+|+.+++.+ .. ...||.|
T Consensus 81 ~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~------~~~KP~p-------------- 140 (220)
T PLN02811 81 PGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEV------KQGKPAP-------------- 140 (220)
T ss_pred ccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhc------cCCCCCc--------------
Confidence 999999999999999999999998765544 344457888999999877 32 1347766
Q ss_pred CCchHHHHHHHHHhhh---cCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 151 NMCKGVVIERIQASLS---KEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 151 ~~~K~~~l~~~~~~~~---~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
+++..++.+++ .. +++|+||||+..|+.+|+++|...+.+.+.
T Consensus 141 -----~~~~~a~~~~~~~~~~-~~~~v~IgDs~~di~aA~~aG~~~i~v~~~ 186 (220)
T PLN02811 141 -----DIFLAAARRFEDGPVD-PGKVLVFEDAPSGVEAAKNAGMSVVMVPDP 186 (220)
T ss_pred -----HHHHHHHHHhCCCCCC-ccceEEEeccHhhHHHHHHCCCeEEEEeCC
Confidence 56666666664 33 589999999999999999999877776544
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.6e-17 Score=132.80 Aligned_cols=108 Identities=9% Similarity=0.064 Sum_probs=82.6
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCC-CHHHHHHHHHHcCCc---------CCcceEecCCCccCCCCceeecccCC
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDA-NLFFIETILEHLGIR---------DCFSEINTNPGFVDEEGRLRIFPFHD 137 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~-~~~~i~~~l~~~gl~---------~~fd~i~~~~~~~~~~g~~~~kp~~~ 137 (275)
.++.++||+.++|+.|+++|++++|+||+ ....++.+++.+|+. ++|+.+++++.. ...||.+
T Consensus 42 ~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~------~~~kp~~- 114 (174)
T TIGR01685 42 TEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKP------NKAKQLE- 114 (174)
T ss_pred CEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCC------chHHHHH-
Confidence 45789999999999999999999999998 888999999999998 999999986641 0223322
Q ss_pred CCCCCCCCCcCCCCCchHHHHHHHHHhh--hcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCch
Q 044553 138 FTKCSHGCNLCPPNMCKGVVIERIQASL--SKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFP 202 (275)
Q Consensus 138 ~~~~~~~~~~~~~~~~K~~~l~~~~~~~--~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~ 202 (275)
.+++.+.... +. .|++|+||||+..|+.+|+++|...+. +.+|+.
T Consensus 115 ------------------~i~~~~~~~~~~gl-~p~e~l~VgDs~~di~aA~~aGi~~i~-v~~g~~ 161 (174)
T TIGR01685 115 ------------------MILQKVNKVDPSVL-KPAQILFFDDRTDNVREVWGYGVTSCY-CPSGMD 161 (174)
T ss_pred ------------------HHHHHhhhcccCCC-CHHHeEEEcChhHhHHHHHHhCCEEEE-cCCCcc
Confidence 4455554432 23 368999999999999999988875444 445543
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=99.69 E-value=8.1e-16 Score=130.85 Aligned_cols=126 Identities=20% Similarity=0.168 Sum_probs=102.4
Q ss_pred HHhCCCCHHHHHHHHh--cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCce
Q 044553 53 LHSQGKTIEDIVEVLK--RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRL 130 (275)
Q Consensus 53 ~~~~~~~~~~~~~~~~--~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~ 130 (275)
+...+.+.+.+...+. .+.+.||+.+++++|+++|++++|+|+|....++.+++++|+...+..|++|...++.+|..
T Consensus 101 ~~~~~~~~e~i~~~v~~~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvl 180 (277)
T TIGR01544 101 LVQQAFPKAKIKEIVAESDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVL 180 (277)
T ss_pred HhcCCCCHHHHHHHHhhcCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeE
Confidence 3445667888888886 79999999999999999999999999999999999999999987788999999999889999
Q ss_pred eecccCCCCCCCCCCCcCCCCCchHHHHH-HHHHhhh-cCCCCeEEEEcCCCCCccccccc
Q 044553 131 RIFPFHDFTKCSHGCNLCPPNMCKGVVIE-RIQASLS-KEGNKKIIYLGDGSGDYCPSLKL 189 (275)
Q Consensus 131 ~~kp~~~~~~~~~~~~~~~~~~~K~~~l~-~~~~~~~-~~~~~~~i~vGDs~~Di~~a~~~ 189 (275)
.++|.|. .+ ..+|.+.+. .....++ ..++++|+++|||.+|+.||..+
T Consensus 181 tG~~~P~----i~-------~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 181 KGFKGPL----IH-------TFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred eCCCCCc----cc-------ccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence 9987663 11 123666544 4454444 13468999999999999998654
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.4e-17 Score=129.21 Aligned_cols=107 Identities=16% Similarity=0.155 Sum_probs=78.2
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCCH---------------HHHHHHHHHcCCcCCcceEecCCCccCCCCceeec
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDANL---------------FFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIF 133 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~---------------~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~k 133 (275)
...++||+.++|+.|+++|++++|+||+.. ..+...++++|+... ..+.+... .. +.....|
T Consensus 25 ~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~~-~~-~~~~~~K 101 (147)
T TIGR01656 25 DWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVD-GVLFCPHH-PA-DNCSCRK 101 (147)
T ss_pred HeEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCcee-EEEECCCC-CC-CCCCCCC
Confidence 356899999999999999999999999873 567778889998621 12222110 00 0000125
Q ss_pred ccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeec
Q 044553 134 PFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPR 198 (275)
Q Consensus 134 p~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~ 198 (275)
| +.++++.++.+++.. +++|+||||+..|+.+|+++|+..+++.+
T Consensus 102 P-------------------~~~~~~~~~~~~~~~-~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~ 146 (147)
T TIGR01656 102 P-------------------KPGLILEALKRLGVD-ASRSLVVGDRLRDLQAARNAGLAAVLLVD 146 (147)
T ss_pred C-------------------CHHHHHHHHHHcCCC-hHHEEEEcCCHHHHHHHHHCCCCEEEecC
Confidence 5 447888888888765 58999999999999999999998777654
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=99.65 E-value=8.1e-16 Score=118.26 Aligned_cols=99 Identities=16% Similarity=0.188 Sum_probs=77.8
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCC--------HHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCC
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDAN--------LFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTK 140 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~--------~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~ 140 (275)
+..++|++.++|++|+++|++++|+||+. ...++..++++|+. |+.++.... ..||.|
T Consensus 23 ~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~--------~~KP~~---- 88 (132)
T TIGR01662 23 ERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--IDVLYACPH--------CRKPKP---- 88 (132)
T ss_pred HheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EEEEEECCC--------CCCCCh----
Confidence 35679999999999999999999999998 88899999999986 333332221 236544
Q ss_pred CCCCCCcCCCCCchHHHHHHHHHhhh-cCCCCeEEEEcC-CCCCcccccccCCCCeEee
Q 044553 141 CSHGCNLCPPNMCKGVVIERIQASLS-KEGNKKIIYLGD-GSGDYCPSLKLSEGDHVMP 197 (275)
Q Consensus 141 ~~~~~~~~~~~~~K~~~l~~~~~~~~-~~~~~~~i~vGD-s~~Di~~a~~~~~~~~~~~ 197 (275)
+.++.++.+++ .. +++++|||| +.+|+.+|+.+|+..+++.
T Consensus 89 ---------------~~~~~~~~~~~~~~-~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 89 ---------------GMFLEALKRFNEID-PEESVYVGDQDLTDLQAAKRAGLAFILVA 131 (132)
T ss_pred ---------------HHHHHHHHHcCCCC-hhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence 67778888873 54 589999999 7999999999888766653
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.4e-16 Score=126.33 Aligned_cols=108 Identities=16% Similarity=0.155 Sum_probs=81.6
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCC---------------HHHHHHHHHHcCCcCCcceEe-cCCCccCCCCcee
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDAN---------------LFFIETILEHLGIRDCFSEIN-TNPGFVDEEGRLR 131 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~---------------~~~i~~~l~~~gl~~~fd~i~-~~~~~~~~~g~~~ 131 (275)
..+.++||+.++|++|+++|++++|+||.+ ...+..+++++|+. |+.++ |.....+. ...
T Consensus 26 ~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~--~~~ 101 (161)
T TIGR01261 26 EKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDN--CDC 101 (161)
T ss_pred HHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCC--CCC
Confidence 347889999999999999999999999973 55788899999996 76554 42100000 012
Q ss_pred ecccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 132 IFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 132 ~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
.|| |...++.+...++.. +++++||||+.+|+.+|+.+|+..+.+.+.
T Consensus 102 ~KP-------------------~~~~~~~~~~~~~~~-~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~ 149 (161)
T TIGR01261 102 RKP-------------------KIKLLEPYLKKNLID-KARSYVIGDRETDMQLAENLGIRGIQYDEE 149 (161)
T ss_pred CCC-------------------CHHHHHHHHHHcCCC-HHHeEEEeCCHHHHHHHHHCCCeEEEEChh
Confidence 244 457888888877654 589999999999999999999887776644
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.3e-16 Score=126.02 Aligned_cols=135 Identities=10% Similarity=0.009 Sum_probs=87.7
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHH--------HHHHHHHHcCCcCCcceEe-cCCCccCCCCceeecccCCCC
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDANLF--------FIETILEHLGIRDCFSEIN-TNPGFVDEEGRLRIFPFHDFT 139 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~--------~i~~~l~~~gl~~~fd~i~-~~~~~~~~~g~~~~kp~~~~~ 139 (275)
.+.++||+.++|++|+++|++++|+||+... .....++.+|++.+|..+. +.+ +....||.|
T Consensus 26 ~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~------~~~~~KP~p--- 96 (173)
T PRK06769 26 SFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGD------GCECRKPST--- 96 (173)
T ss_pred HeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCC------CCCCCCCCH---
Confidence 4678999999999999999999999998642 1334466777755432221 111 111346655
Q ss_pred CCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHh--hCCCceeEE
Q 044553 140 KCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLII--RNPMLIKAE 217 (275)
Q Consensus 140 ~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~ 217 (275)
..+..++++++.. +++|+||||+.+|+.+|+++|+..+.+.++ +....+.. +......+
T Consensus 97 ----------------~~~~~~~~~l~~~-p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g-~~~~~~~~~~~~l~~~~~- 157 (173)
T PRK06769 97 ----------------GMLLQAAEKHGLD-LTQCAVIGDRWTDIVAAAKVNATTILVRTG-AGYDALHTYRDKWAHIEP- 157 (173)
T ss_pred ----------------HHHHHHHHHcCCC-HHHeEEEcCCHHHHHHHHHCCCeEEEEecC-CCchhhhhhhcccccCCC-
Confidence 6777777777654 589999999999999999999977766543 21111110 00000111
Q ss_pred EeeCCChHHHHHHH
Q 044553 218 IHEWTDGEELEQIL 231 (275)
Q Consensus 218 ~~~~~~~~el~~~l 231 (275)
...++++.||.++|
T Consensus 158 ~~~~~~~~el~~~l 171 (173)
T PRK06769 158 NYIAENFEDAVNWI 171 (173)
T ss_pred cchhhCHHHHHHHH
Confidence 23578888888765
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.2e-15 Score=126.86 Aligned_cols=168 Identities=12% Similarity=0.030 Sum_probs=103.8
Q ss_pred ceEEEEEcCCcccCCccH---HHHH-HHhCCChHH-H---hhcCCCChHHHHH-------HHHHHHHhCCCCHHH-----
Q 044553 3 GIVVIFDFDKTIIDCDSD---NFVV-DELGATDLF-N---QLLPTMPWNSLMD-------RMMKELHSQGKTIED----- 62 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~---~~~~-~~~g~~~~~-~---~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~----- 62 (275)
+++++|||||||++.++. ...+ +++|++... . ...+ ........ .++.... .+.+.++
T Consensus 6 ~k~~iFD~DGTL~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~ig-~~l~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~ 83 (211)
T PRK11590 6 RRVVFFDLDGTLHQQDMFGSFLRYLLRRQPLNLLLVLPLLPVIG-LGLLVKGRAARWPMSLLLWGCT-FGHSEARLQALE 83 (211)
T ss_pred ceEEEEecCCCCcccchHHHHHHHHHHhcchhhHHHhHHHHHhc-cCcccchhhhhhhHHHHHHHHH-cCCCHHHHHHHH
Confidence 689999999999977764 2333 666655222 1 1111 11111111 1111111 1223332
Q ss_pred --HHHHHhc-CCCCCCHHHHH-HHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCC
Q 044553 63 --IVEVLKR-IPIHPRVVPAI-KSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDF 138 (275)
Q Consensus 63 --~~~~~~~-~~~~pg~~e~L-~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~ 138 (275)
+.+.+.. ..++||+.++| +.|+++|++++|+||++...++.+++.+|+.. .+.+++++......|.+.+.+
T Consensus 84 ~~f~~~~~~~~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~~~~tg~~~g~~---- 158 (211)
T PRK11590 84 ADFVRWFRDNVTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQRRYGGWVLTLR---- 158 (211)
T ss_pred HHHHHHHHHhCcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEEEEEccEECCcc----
Confidence 2222322 57899999999 57888999999999999999999999999633 456777775443333333221
Q ss_pred CCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 139 TKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 139 ~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
| .+..|...++++... ....++++|||.+|+.+...++.
T Consensus 159 ------c----~g~~K~~~l~~~~~~----~~~~~~aY~Ds~~D~pmL~~a~~ 197 (211)
T PRK11590 159 ------C----LGHEKVAQLERKIGT----PLRLYSGYSDSKQDNPLLYFCQH 197 (211)
T ss_pred ------C----CChHHHHHHHHHhCC----CcceEEEecCCcccHHHHHhCCC
Confidence 1 134488888877632 24678999999999987755444
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.64 E-value=9.3e-16 Score=122.41 Aligned_cols=93 Identities=18% Similarity=0.240 Sum_probs=71.4
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHH------------HHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCC
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLF------------FIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFT 139 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~------------~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~ 139 (275)
++||+.++|+.|+++|++++|+||++.. .++.+++++|+.. +.+++.+.. ...||.|
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~ii~~~~~------~~~KP~p--- 111 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVLAATHAG------LYRKPMT--- 111 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEEEecCCC------CCCCCcc---
Confidence 6899999999999999999999998763 5788899999853 455544321 1346654
Q ss_pred CCCCCCCcCCCCCchHHHHHHHHHhhh--cCCCCeEEEEcCCC--------CCcccccccCCC
Q 044553 140 KCSHGCNLCPPNMCKGVVIERIQASLS--KEGNKKIIYLGDGS--------GDYCPSLKLSEG 192 (275)
Q Consensus 140 ~~~~~~~~~~~~~~K~~~l~~~~~~~~--~~~~~~~i~vGDs~--------~Di~~a~~~~~~ 192 (275)
..++.++.+++ .. +++++||||+. +|+.+|+++|..
T Consensus 112 ----------------~~~~~~~~~~~~~~~-~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~ 157 (166)
T TIGR01664 112 ----------------GMWEYLQSQYNSPIK-MTRSFYVGDAAGRKLDFSDADIKFAKNLGLE 157 (166)
T ss_pred ----------------HHHHHHHHHcCCCCC-chhcEEEECCCCCCCCCchhHHHHHHHCCCC
Confidence 56777777776 44 58999999996 599999887764
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.5e-15 Score=116.11 Aligned_cols=117 Identities=16% Similarity=0.150 Sum_probs=85.5
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCc
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNL 147 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~ 147 (275)
....++|++.++|+.|+++|++++|+||+....++..++.+|+..+|+.+++........+.... ......
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---------~~~~~~ 91 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGL---------FLGGGP 91 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccc---------cccccc
Confidence 56789999999999999999999999999999999999999998888888876543211000000 000111
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCe
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDH 194 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~ 194 (275)
+.....|...++.+...++.. ++++++|||+.+|+.++..++...+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~igD~~~d~~~~~~~g~~~i 137 (139)
T cd01427 92 FDIGKPNPDKLLAALKLLGVD-PEEVLMVGDSLNDIEMAKAAGGLGV 137 (139)
T ss_pred cccCCCCHHHHHHHHHHcCCC-hhhEEEeCCCHHHHHHHHHcCCcee
Confidence 122344677777777776554 5899999999999999977666544
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.6e-14 Score=117.60 Aligned_cols=103 Identities=11% Similarity=0.038 Sum_probs=74.3
Q ss_pred CCCCCCHHHHHH-HHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcC
Q 044553 70 IPIHPRVVPAIK-SAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLC 148 (275)
Q Consensus 70 ~~~~pg~~e~L~-~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~ 148 (275)
..++|++.++|+ .++++|++++|+||++...++.+++..++... +.++|++..+...|.+.+.+ |
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~-~~~i~t~le~~~gg~~~g~~----------c--- 158 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR-LNLIASQIERGNGGWVLPLR----------C--- 158 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc-CcEEEEEeEEeCCceEcCcc----------C---
Confidence 468999999996 78889999999999999999999998766332 45777776553223332211 1
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
-+..|...++++... ..+.++++|||.+|+.+...++.
T Consensus 159 -~g~~Kv~rl~~~~~~----~~~~~~aYsDS~~D~pmL~~a~~ 196 (210)
T TIGR01545 159 -LGHEKVAQLEQKIGS----PLKLYSGYSDSKQDNPLLAFCEH 196 (210)
T ss_pred -CChHHHHHHHHHhCC----ChhheEEecCCcccHHHHHhCCC
Confidence 134488888877742 24678999999999987754443
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.56 E-value=4.6e-14 Score=117.02 Aligned_cols=171 Identities=15% Similarity=0.169 Sum_probs=116.6
Q ss_pred CceEEEEEcCCcccCCcc-----HHHHHHHhCCC-hH------HH-hh------------cC-CCChHHHHHHHHHHHHh
Q 044553 2 SGIVVIFDFDKTIIDCDS-----DNFVVDELGAT-DL------FN-QL------------LP-TMPWNSLMDRMMKELHS 55 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~-~~------~~-~~------------~~-~~~~~~~~~~~~~~~~~ 55 (275)
..|+|+||++|||+.... +..+.+.+|++ .. .. .+ .. .+.+.+.+..++.....
T Consensus 6 ~iravtfD~~~tLl~~~~~~~~~y~~i~~~~gl~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~~lv~~~f~ 85 (237)
T KOG3085|consen 6 RIRAVTFDAGGTLLATLPPVMEVYCEIAEAYGLEYDDSLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWPKLVESTFG 85 (237)
T ss_pred ceEEEEEeCCCceeecCCccHHHHHHHHHHhCCCCCHHHHhHhhhHHHHhhcccCCcccccCCcccHHHHHHHHHHHHhc
Confidence 478999999999997532 35577777876 11 00 01 01 12334444444443322
Q ss_pred C-CCC-HHHHHH-----HH-----hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCc
Q 044553 56 Q-GKT-IEDIVE-----VL-----KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGF 123 (275)
Q Consensus 56 ~-~~~-~~~~~~-----~~-----~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~ 123 (275)
. +.. .++..+ .+ ....+.+++.+++++||..|..++++||... ..+.++..+|+..+||.++.+-..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~-r~~~~l~~~~l~~~fD~vv~S~e~ 164 (237)
T KOG3085|consen 86 KAGIDYEEELLENFSFRLFSTFAPSAWKYLDGMQELLQKLRKKGTILGIISNFDD-RLRLLLLPLGLSAYFDFVVESCEV 164 (237)
T ss_pred cccchhHHHHHhhhhhheeccccccCceeccHHHHHHHHHHhCCeEEEEecCCcH-HHHHHhhccCHHHhhhhhhhhhhh
Confidence 2 222 122221 11 1355678899999999999999999999765 556888899999999988754432
Q ss_pred cCCCCceeecccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccccccCCCCeEeecC
Q 044553 124 VDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 124 ~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~~~~~~~~~~~ 199 (275)
- ..||+| ++++..+...+.. |++|++|||+ .||+.+|+.+|+..+.+...
T Consensus 165 g------~~KPDp-------------------~If~~al~~l~v~-Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~ 215 (237)
T KOG3085|consen 165 G------LEKPDP-------------------RIFQLALERLGVK-PEECVHIGDLLENDYEGARNLGWHAILVDNS 215 (237)
T ss_pred c------cCCCCh-------------------HHHHHHHHHhCCC-hHHeEEecCccccccHhHHHcCCEEEEEccc
Confidence 1 347776 7788888877665 6999999999 78999999999988887644
|
|
| >KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.54 E-value=8.6e-14 Score=114.91 Aligned_cols=173 Identities=12% Similarity=0.058 Sum_probs=119.7
Q ss_pred ceEEEEEcCCcccCCccH-----HHHHHHhCCChHH--HhhcCCCChHHHHHHHHHHHHhCCCCHHHHH--------HHH
Q 044553 3 GIVVIFDFDKTIIDCDSD-----NFVVDELGATDLF--NQLLPTMPWNSLMDRMMKELHSQGKTIEDIV--------EVL 67 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~-----~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 67 (275)
..+++||+||||+|++.. ..++..+|.+... .....+..-.+..+.++.. .....+.+++. +..
T Consensus 10 ~~~~lfD~dG~lvdte~~y~~~~~~~~~~ygk~~~~~~~~~~mG~~~~eaa~~~~~~-~~dp~s~ee~~~e~~~~~~~~~ 88 (222)
T KOG2914|consen 10 VSACLFDMDGTLVDTEDLYTEAWQELLDRYGKPYPWDVKVKSMGKRTSEAARLFVKK-LPDPVSREEFNKEEEEILDRLF 88 (222)
T ss_pred eeeEEEecCCcEEecHHHHHHHHHHHHHHcCCCChHHHHHHHcCCCHHHHHHHHHhh-cCCCCCHHHHHHHHHHHHHHhc
Confidence 568999999999999763 5677788864222 2222233333444444311 12234455443 234
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcC-CcCCcceEecCCCccCCCCceeecccCCCCCCCCCCC
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLG-IRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCN 146 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~g-l~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~ 146 (275)
....+.||+..++..|+.+|++++++|++.+...+...++++ +-..|+.++..+.. -...+||+|+
T Consensus 89 ~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~----~v~~gKP~Pd--------- 155 (222)
T KOG2914|consen 89 MNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDP----EVKNGKPDPD--------- 155 (222)
T ss_pred cccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCc----cccCCCCCch---------
Confidence 557899999999999999999999999999999999998876 66777776663321 1235688885
Q ss_pred cCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 147 LCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 147 ~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
++-.....++..+++.|+++.|+...+.+|+++|+..++++..
T Consensus 156 ----------i~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~ 198 (222)
T KOG2914|consen 156 ----------IYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATP 198 (222)
T ss_pred ----------HHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecCC
Confidence 2233344444433489999999999999999999988887763
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.54 E-value=3e-14 Score=118.49 Aligned_cols=105 Identities=18% Similarity=0.196 Sum_probs=85.2
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHc---CCcCCcceEecCCCccCCCCceeecccCCCCCCCCCC
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHL---GIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGC 145 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~---gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~ 145 (275)
+..++||+.++|++|+++|++++|+||++...++.++++. ++.++|+.++... . ..||.|
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~~--~------g~KP~p--------- 155 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDTT--V------GLKTEA--------- 155 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEeC--c------ccCCCH---------
Confidence 3579999999999999999999999999999889888886 6777777665321 1 136655
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCc
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNF 201 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~ 201 (275)
+.+..++.+++.. |++++||||+..|+.+|+++|+..+.+.|.+.
T Consensus 156 ----------~~y~~i~~~lgv~-p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g~ 200 (220)
T TIGR01691 156 ----------QSYVKIAGQLGSP-PREILFLSDIINELDAARKAGLHTGQLVRPGN 200 (220)
T ss_pred ----------HHHHHHHHHhCcC-hhHEEEEeCCHHHHHHHHHcCCEEEEEECCCC
Confidence 5667777777655 58999999999999999999998888887764
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.1e-14 Score=125.72 Aligned_cols=111 Identities=21% Similarity=0.303 Sum_probs=81.0
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCC---------------CHHHHHHHHHHcCCcCCcceEecCCCccCCCCceee
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDA---------------NLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRI 132 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~---------------~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~ 132 (275)
.+..++||+.++|++|+++|++++|+||+ +...+..+++.+|+. |+.++.+....
T Consensus 27 ~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~~~-------- 96 (354)
T PRK05446 27 DKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPHFP-------- 96 (354)
T ss_pred ccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCCcC--------
Confidence 45789999999999999999999999995 345677788888884 66554321100
Q ss_pred cccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCc
Q 044553 133 FPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNF 201 (275)
Q Consensus 133 kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~ 201 (275)
.+.|.++++|..++..++.+++.. +++++||||+.+|+.+|+.+|+..+++.+...
T Consensus 97 ------------sd~~~~rKP~p~~l~~a~~~l~v~-~~~svmIGDs~sDi~aAk~aGi~~I~v~~~~~ 152 (354)
T PRK05446 97 ------------EDNCSCRKPKTGLVEEYLAEGAID-LANSYVIGDRETDVQLAENMGIKGIRYARETL 152 (354)
T ss_pred ------------cccCCCCCCCHHHHHHHHHHcCCC-cccEEEEcCCHHHHHHHHHCCCeEEEEECCCC
Confidence 000112233567888887776654 58999999999999999999998887755433
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.3e-14 Score=109.60 Aligned_cols=85 Identities=14% Similarity=0.203 Sum_probs=69.8
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCC-CHHHHHHHHHHcC-------CcCCcceEecCCCccCCCCceeecccCCCCCCC
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDA-NLFFIETILEHLG-------IRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCS 142 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~-~~~~i~~~l~~~g-------l~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~ 142 (275)
.++||+.++|++|+++|++++|+||+ ....+...++.++ +.++|+.+++++. +|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~----------~p-------- 90 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYW----------LP-------- 90 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCC----------Cc--------
Confidence 67999999999999999999999999 8888999999988 7888888776532 22
Q ss_pred CCCCcCCCCCchHHHHHHHHHhhh--cCCCCeEEEEcCCCCCccc
Q 044553 143 HGCNLCPPNMCKGVVIERIQASLS--KEGNKKIIYLGDGSGDYCP 185 (275)
Q Consensus 143 ~~~~~~~~~~~K~~~l~~~~~~~~--~~~~~~~i~vGDs~~Di~~ 185 (275)
|++.+..++.+++ .. |++|+||||+..|+..
T Consensus 91 -----------kp~~~~~a~~~lg~~~~-p~~~l~igDs~~n~~~ 123 (128)
T TIGR01681 91 -----------KSPRLVEIALKLNGVLK-PKSILFVDDRPDNNEE 123 (128)
T ss_pred -----------HHHHHHHHHHHhcCCCC-cceEEEECCCHhHHHH
Confidence 4466777777776 54 5899999999988753
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.2e-13 Score=109.56 Aligned_cols=176 Identities=16% Similarity=0.175 Sum_probs=122.6
Q ss_pred ceEEEEEcCCcccCCccH----------HHHHHHhCCChHHHhhcCCCChHHHHHHHHHH-HHhCCCCHHHHHHHH----
Q 044553 3 GIVVIFDFDKTIIDCDSD----------NFVVDELGATDLFNQLLPTMPWNSLMDRMMKE-LHSQGKTIEDIVEVL---- 67 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~----------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---- 67 (275)
.+.++||+|.||+..++- ..+.+++|+++.....+...-+..+--.+... ..+...+.+++.+++
T Consensus 15 ~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aGL~~~~~~~d~deY~~~V~~~L 94 (244)
T KOG3109|consen 15 YKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAGLKAVGYIFDADEYHRFVHGRL 94 (244)
T ss_pred ceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHHHhhccC
Confidence 478999999999998652 45666777764332221110011111111111 112233467776654
Q ss_pred --hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCC
Q 044553 68 --KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGC 145 (275)
Q Consensus 68 --~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~ 145 (275)
+.+.|.+-.+.+|-.|+.++ ..+.||+....+.++|+++|+.+.|+.|+|.+..-...-.+.-||.
T Consensus 95 Plq~LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~~~~~vcKP~---------- 162 (244)
T KOG3109|consen 95 PLQDLKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPIEKTVVCKPS---------- 162 (244)
T ss_pred cHhhcCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCCCCceeecCC----------
Confidence 34788889999999999764 8899999999999999999999999999987643100011222443
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
.++++......++..|.+++++.||.+.|.+|+.+|+..+++.+.
T Consensus 163 ---------~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~ 207 (244)
T KOG3109|consen 163 ---------EEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGRE 207 (244)
T ss_pred ---------HHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEEEEee
Confidence 378888888888876789999999999999999999998887765
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=5.3e-14 Score=117.93 Aligned_cols=96 Identities=11% Similarity=-0.004 Sum_probs=74.0
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCC----CHHHHHHHHHHcCC--cCCcceEecCCCccCCCCceeecccCCCCCCC
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDA----NLFFIETILEHLGI--RDCFSEINTNPGFVDEEGRLRIFPFHDFTKCS 142 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~----~~~~i~~~l~~~gl--~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~ 142 (275)
...|+||+.++|+.|+++|++++++||+ ....++.+++.+|+ .++|+.+++.+.. .||.
T Consensus 112 ~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--------~K~~------- 176 (237)
T PRK11009 112 FSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--------GQYT------- 176 (237)
T ss_pred cCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC--------CCCC-------
Confidence 4778999999999999999999999995 45678888888999 8888888875531 2332
Q ss_pred CCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 143 HGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 143 ~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
|...+ .++ .-++||||+.+|+.+|+++|...+.+.++
T Consensus 177 -----------K~~~l----~~~-----~i~I~IGDs~~Di~aA~~AGi~~I~v~~G 213 (237)
T PRK11009 177 -----------KTQWL----KKK-----NIRIFYGDSDNDITAAREAGARGIRILRA 213 (237)
T ss_pred -----------HHHHH----Hhc-----CCeEEEcCCHHHHHHHHHcCCcEEEEecC
Confidence 33322 232 35899999999999999999887776554
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.6e-13 Score=110.08 Aligned_cols=95 Identities=17% Similarity=0.144 Sum_probs=74.7
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCC-HHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDAN-LFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLC 148 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~-~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~ 148 (275)
..++|++.++|++|+++|++++|+||++ ...+..+++.+|+..+ .. ..||.|
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~-----~~----------~~KP~p------------ 94 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVL-----PH----------AVKPPG------------ 94 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEE-----cC----------CCCCCh------------
Confidence 4578999999999999999999999998 6777777788776421 10 236654
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCC-CCcccccccCCCCeEeecC
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~ 199 (275)
.+++.++.+++.. +++++||||+. +|+.+|+++|+..+++..+
T Consensus 95 -------~~~~~~l~~~~~~-~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g 138 (170)
T TIGR01668 95 -------CAFRRAHPEMGLT-SEQVAVVGDRLFTDVMGGNRNGSYTILVEPL 138 (170)
T ss_pred -------HHHHHHHHHcCCC-HHHEEEECCcchHHHHHHHHcCCeEEEEccC
Confidence 6777777777655 58999999997 7999999999877766544
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.4e-12 Score=120.15 Aligned_cols=148 Identities=16% Similarity=0.239 Sum_probs=94.7
Q ss_pred ceEEEEEcCCcccCCccHHHHHHH-hCCChHHHhhcC--CCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHH
Q 044553 3 GIVVIFDFDKTIIDCDSDNFVVDE-LGATDLFNQLLP--TMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPA 79 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~~~~~~~-~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~ 79 (275)
...++||+||||+.+++....+.. +...+...-... -..+....++.+.... +.+. ...+++||+.++
T Consensus 10 ~~pl~~DlDgTLi~td~l~e~~~~~l~~~p~~~~~l~~~~~~g~a~lK~~~a~~~--~~d~-------~~lp~~pga~e~ 80 (479)
T PRK08238 10 DLPLVVDLDGTLIRTDLLHESIFALLRRNPLALLRLPLWLLRGKAALKRRLARRV--DLDV-------ATLPYNEEVLDY 80 (479)
T ss_pred CCCEEEeCCCCccccchHHHHHHHHHHhChHHHHHHHHHHHhcHHHHHHHHHhhc--CCCh-------hhCCCChhHHHH
Confidence 457899999999999986443322 322221110000 0001111111111110 1111 335678999999
Q ss_pred HHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHHH
Q 044553 80 IKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIE 159 (275)
Q Consensus 80 L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~ 159 (275)
+++++++|++++|+|+++...++.+++++|+ ||.+++++... ..||.+ |.+.+.
T Consensus 81 L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigsd~~~------~~kg~~-----------------K~~~l~ 134 (479)
T PRK08238 81 LRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFASDGTT------NLKGAA-----------------KAAALV 134 (479)
T ss_pred HHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeCCCcc------ccCCch-----------------HHHHHH
Confidence 9999999999999999999999999999998 88999877532 223222 555555
Q ss_pred HHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 160 RIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 160 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
+... .++++|+|||.+|+.++..++.
T Consensus 135 ~~l~------~~~~~yvGDS~~Dlp~~~~A~~ 160 (479)
T PRK08238 135 EAFG------ERGFDYAGNSAADLPVWAAARR 160 (479)
T ss_pred HHhC------ccCeeEecCCHHHHHHHHhCCC
Confidence 4332 2458999999999999877663
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.6e-13 Score=111.94 Aligned_cols=96 Identities=23% Similarity=0.235 Sum_probs=68.9
Q ss_pred CCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCC-CceeecccCCCCCCCCCCCcCCCCC
Q 044553 74 PRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEE-GRLRIFPFHDFTKCSHGCNLCPPNM 152 (275)
Q Consensus 74 pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~-g~~~~kp~~~~~~~~~~~~~~~~~~ 152 (275)
|++.++|++++++|++++|+|+++..+++.+++.+|+... .++++.. ++.. +...++..+. .++
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~--~v~~~~~-~~~~~~~~~~~~~~~-----------~~~- 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDD--NVIGNEL-FDNGGGIFTGRITGS-----------NCG- 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEG--GEEEEEE-ECTTCCEEEEEEEEE-----------EES-
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce--EEEEEee-eecccceeeeeECCC-----------CCC-
Confidence 4444999999999999999999999999999999998743 4666665 4333 2223332221 011
Q ss_pred chHHHHHHH---HHhhhcCCCCeEEEEcCCCCCcccc
Q 044553 153 CKGVVIERI---QASLSKEGNKKIIYLGDGSGDYCPS 186 (275)
Q Consensus 153 ~K~~~l~~~---~~~~~~~~~~~~i~vGDs~~Di~~a 186 (275)
+|..+++.+ ... .. ++..+++||||.+|+.++
T Consensus 157 ~K~~~l~~~~~~~~~-~~-~~~~~~~iGDs~~D~~~l 191 (192)
T PF12710_consen 157 GKAEALKELYIRDEE-DI-DPDRVIAIGDSINDLPML 191 (192)
T ss_dssp HHHHHHHHHHHHHHH-TH-TCCEEEEEESSGGGHHHH
T ss_pred cHHHHHHHHHHHhhc-CC-CCCeEEEEECCHHHHHHh
Confidence 499999999 222 22 257999999999999764
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.7e-13 Score=108.18 Aligned_cols=83 Identities=20% Similarity=0.274 Sum_probs=68.1
Q ss_pred HHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHH
Q 044553 79 AIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVI 158 (275)
Q Consensus 79 ~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l 158 (275)
+|++|+++|++++|+||++...+...++++|+..+|+.. +| |...+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~~---------------~~-------------------k~~~~ 81 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQGQ---------------SN-------------------KLIAF 81 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEecc---------------cc-------------------hHHHH
Confidence 899999999999999999999999999999998664310 12 56788
Q ss_pred HHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEee
Q 044553 159 ERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMP 197 (275)
Q Consensus 159 ~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~ 197 (275)
++++.+++.. +++|+||||+.+|+.+++.+|.. +++.
T Consensus 82 ~~~~~~~~~~-~~~~~~vGDs~~D~~~~~~ag~~-~~v~ 118 (154)
T TIGR01670 82 SDILEKLALA-PENVAYIGDDLIDWPVMEKVGLS-VAVA 118 (154)
T ss_pred HHHHHHcCCC-HHHEEEECCCHHHHHHHHHCCCe-EecC
Confidence 8888887755 48999999999999999887764 5443
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.1e-12 Score=102.97 Aligned_cols=109 Identities=17% Similarity=0.170 Sum_probs=85.4
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCC---------------HHHHHHHHHHcCCcCCcceEecCCCccCCCCceee
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDAN---------------LFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRI 132 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~---------------~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~ 132 (275)
..+.+.||+.+.+..|++.||+++|+||.+ +..+...|+..|. .|+.|+.+.
T Consensus 28 ~~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv--~id~i~~Cp----------- 94 (181)
T COG0241 28 DDFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGV--KIDGILYCP----------- 94 (181)
T ss_pred HHhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCC--ccceEEECC-----------
Confidence 457789999999999999999999999942 3335555666665 366666433
Q ss_pred cccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 133 FPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 133 kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
++ +...|.|+++|...+.+++.+++.. +++.++|||..+|+.+|.++|..++.+.++
T Consensus 95 --h~-------p~~~c~cRKP~~gm~~~~~~~~~iD-~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~ 151 (181)
T COG0241 95 --HH-------PEDNCDCRKPKPGMLLSALKEYNID-LSRSYVVGDRLTDLQAAENAGIKGVLVLTG 151 (181)
T ss_pred --CC-------CCCCCcccCCChHHHHHHHHHhCCC-ccceEEecCcHHHHHHHHHCCCCceEEEcC
Confidence 22 2333889999999999999999866 589999999999999999999987776654
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.1e-12 Score=114.70 Aligned_cols=107 Identities=21% Similarity=0.148 Sum_probs=81.8
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcC-CcceEecCCCcc---CCCCceeecccCCCCCCCCC
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRD-CFSEINTNPGFV---DEEGRLRIFPFHDFTKCSHG 144 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~-~fd~i~~~~~~~---~~~g~~~~kp~~~~~~~~~~ 144 (275)
...++|++.++|+.|+++|++++++||++....+..++.+++.. +|+.+++.+... ...+ ..||+|
T Consensus 185 ~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~--~~kp~p-------- 254 (300)
T PHA02530 185 EDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHFQREQG--DKRPDD-------- 254 (300)
T ss_pred cCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhhcccCC--CCCCcH--------
Confidence 46789999999999999999999999999999999999999986 899888876210 0001 235544
Q ss_pred CCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEe
Q 044553 145 CNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVM 196 (275)
Q Consensus 145 ~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~ 196 (275)
..+...+.+.....+++|+||||+.+|+.+|+++|...+.+
T Consensus 255 -----------~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v 295 (300)
T PHA02530 255 -----------VVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQV 295 (300)
T ss_pred -----------HHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEe
Confidence 34444444443323589999999999999999988766655
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=99.37 E-value=3.8e-13 Score=105.46 Aligned_cols=90 Identities=13% Similarity=0.079 Sum_probs=69.4
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcC-CcceEecCCCccCCCCceeecccCCCCCCCCCCCc
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRD-CFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNL 147 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~-~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~ 147 (275)
.+.++||+.++|++|+ ++++++|+|++...+++.+++++++.. +|+.|++.+... ..||.
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~------~~KP~------------ 103 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECV------FVKGK------------ 103 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECcccc------ccCCe------------
Confidence 4678999999999998 579999999999999999999999965 468888876543 33442
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccc
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLK 188 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~ 188 (275)
+.+.+..++.. +++|+||||+.+|+.++..
T Consensus 104 ----------~~k~l~~l~~~-p~~~i~i~Ds~~~~~aa~~ 133 (148)
T smart00577 104 ----------YVKDLSLLGRD-LSNVIIIDDSPDSWPFHPE 133 (148)
T ss_pred ----------EeecHHHcCCC-hhcEEEEECCHHHhhcCcc
Confidence 11222333333 6899999999999998854
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.33 E-value=9.1e-12 Score=96.35 Aligned_cols=93 Identities=15% Similarity=0.179 Sum_probs=77.0
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCP 149 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~ 149 (275)
....|.+.+.+..+++.|+++.|+||.....+...++++|++ .|+. ..||.+
T Consensus 45 ~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~----fi~~-----------A~KP~~------------- 96 (175)
T COG2179 45 PDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP----FIYR-----------AKKPFG------------- 96 (175)
T ss_pred CCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc----eeec-----------ccCccH-------------
Confidence 445678889999999999999999999999999999999985 4553 236655
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccccccCCCCeEee
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSLKLSEGDHVMP 197 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~~~~~~~~~ 197 (275)
..+.+++.+++.. +++|+||||. -+|+.++.++|...+.+.
T Consensus 97 ------~~fr~Al~~m~l~-~~~vvmVGDqL~TDVlggnr~G~~tIlV~ 138 (175)
T COG2179 97 ------RAFRRALKEMNLP-PEEVVMVGDQLFTDVLGGNRAGMRTILVE 138 (175)
T ss_pred ------HHHHHHHHHcCCC-hhHEEEEcchhhhhhhcccccCcEEEEEE
Confidence 6788888888776 5899999999 799999999888776654
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.32 E-value=3.6e-12 Score=117.99 Aligned_cols=93 Identities=17% Similarity=0.260 Sum_probs=70.6
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCH------------HHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCC
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANL------------FFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFT 139 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~------------~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~ 139 (275)
++||+.+.|+.|++.||+++|+||.+. ..+..+++++|+. |+.+++.+.. ...||.|
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdviia~~~~------~~RKP~p--- 266 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFIAIGAG------FYRKPLT--- 266 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEEeCCCC------CCCCCCH---
Confidence 589999999999999999999999766 4588899999985 7877765431 1335544
Q ss_pred CCCCCCCcCCCCCchHHHHHHHHHhhh---cCCCCeEEEEcCCCCCcccccccCC
Q 044553 140 KCSHGCNLCPPNMCKGVVIERIQASLS---KEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 140 ~~~~~~~~~~~~~~K~~~l~~~~~~~~---~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
..+..++..++ ...+++++||||+..|+.+++++|.
T Consensus 267 ----------------Gm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~ 305 (526)
T TIGR01663 267 ----------------GMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANGKAAGK 305 (526)
T ss_pred ----------------HHHHHHHHhcCcccCCCHHHeEEeCCcccchHHHHhcCC
Confidence 66777776663 1235899999999999977665554
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.3e-12 Score=104.66 Aligned_cols=80 Identities=19% Similarity=0.273 Sum_probs=66.2
Q ss_pred HHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHH
Q 044553 78 PAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVV 157 (275)
Q Consensus 78 e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~ 157 (275)
..++.|+++|++++|+||.+...+..+++.+|+..+|+ +. + .|...
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~---g~------------~-------------------~k~~~ 100 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQ---GQ------------S-------------------NKLIA 100 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeec---CC------------C-------------------cHHHH
Confidence 36788888999999999999999999999999876653 10 0 16688
Q ss_pred HHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCC
Q 044553 158 IERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEG 192 (275)
Q Consensus 158 l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~ 192 (275)
++.++.+++.. +++++||||+.+|+.+++.+|..
T Consensus 101 l~~~~~~~gl~-~~ev~~VGDs~~D~~~a~~aG~~ 134 (183)
T PRK09484 101 FSDLLEKLAIA-PEQVAYIGDDLIDWPVMEKVGLS 134 (183)
T ss_pred HHHHHHHhCCC-HHHEEEECCCHHHHHHHHHCCCe
Confidence 88898888765 58999999999999999887765
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.1e-13 Score=111.97 Aligned_cols=90 Identities=23% Similarity=0.260 Sum_probs=67.9
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCP 149 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~ 149 (275)
.+++|++.++|+.|++.|++++++|+.....+..+.+.+|+.+ .++.+... +||.+
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~---~~v~a~~~--------~kP~~------------- 181 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD---SIVFARVI--------GKPEP------------- 181 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS---EEEEESHE--------TTTHH-------------
T ss_pred CcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc---cccccccc--------ccccc-------------
Confidence 4688999999999999999999999999999999999999943 23322210 36654
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccC
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLS 190 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~ 190 (275)
| ++.++.+.++.. +.+|+||||+.||+.++++++
T Consensus 182 ----k--~~~~~i~~l~~~-~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 182 ----K--IFLRIIKELQVK-PGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp ----H--HHHHHHHHHTCT-GGGEEEEESSGGHHHHHHHSS
T ss_pred ----h--hHHHHHHHHhcC-CCEEEEEccCHHHHHHHHhCc
Confidence 4 444444444433 369999999999999886653
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.9e-12 Score=101.50 Aligned_cols=78 Identities=14% Similarity=0.183 Sum_probs=64.2
Q ss_pred HHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHH
Q 044553 79 AIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVI 158 (275)
Q Consensus 79 ~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l 158 (275)
.+..|+++|++++|+||+....++..++++|+..+|+.+ || |+..+
T Consensus 42 ~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~~---------------kp-------------------kp~~~ 87 (169)
T TIGR02726 42 GVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEGI---------------KK-------------------KTEPY 87 (169)
T ss_pred HHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEecC---------------CC-------------------CHHHH
Confidence 577788999999999999999999999999998776521 23 45778
Q ss_pred HHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 159 ERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 159 ~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
+.++..++.. +++++||||+.+|+.+++.+|.
T Consensus 88 ~~~~~~l~~~-~~ev~~iGD~~nDi~~~~~ag~ 119 (169)
T TIGR02726 88 AQMLEEMNIS-DAEVCYVGDDLVDLSMMKRVGL 119 (169)
T ss_pred HHHHHHcCcC-HHHEEEECCCHHHHHHHHHCCC
Confidence 8888887655 4899999999999999976553
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=99.27 E-value=3.1e-11 Score=102.75 Aligned_cols=108 Identities=18% Similarity=0.184 Sum_probs=73.8
Q ss_pred CCCC-CCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCC---------CC
Q 044553 70 IPIH-PRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHD---------FT 139 (275)
Q Consensus 70 ~~~~-pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~---------~~ 139 (275)
+++. ||+.++|++|+++|++++|+||+.+..+...++++|+..+|+.|++++... ..||.++ |.
T Consensus 144 v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~------~~kp~~e~~d~~~~~~~~ 217 (301)
T TIGR01684 144 VRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKA------EEYSTMSTEDRQYRYVFT 217 (301)
T ss_pred cccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccc------cCCCCccccccccceEEe
Confidence 4444 999999999999999999999999999999999999999999999887653 3344442 22
Q ss_pred CCCCCCCc-CCCCCchH-HHHHHHHHhhhcCCCCeEEEEcCC-CCCc
Q 044553 140 KCSHGCNL-CPPNMCKG-VVIERIQASLSKEGNKKIIYLGDG-SGDY 183 (275)
Q Consensus 140 ~~~~~~~~-~~~~~~K~-~~l~~~~~~~~~~~~~~~i~vGDs-~~Di 183 (275)
..++-.+. -..+.+|. +++-.++.+.++.-.+.+-.|.|= .||+
T Consensus 218 ~~~f~~d~~~~~~lPKSprvvl~yL~~~gvn~~KtitLVDDl~~Nn~ 264 (301)
T TIGR01684 218 KTPFYLNTTDGKRLPKSPRVVLWYLYDLGVNYFKSITLVDDLADNNF 264 (301)
T ss_pred cCCeEEeCCCCCcCCCCCeehHHHHHHcCCceeeeEEEeccCcccCc
Confidence 33333332 11223332 455555555554334566677775 4555
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.8e-11 Score=107.95 Aligned_cols=88 Identities=17% Similarity=0.241 Sum_probs=74.4
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHH----cCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCC
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEH----LGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCN 146 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~----~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~ 146 (275)
.++||+.++|+.|+++|++++|+|++....+..++++ +++.++|+.+.++ .||
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~-----------~~p------------ 87 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSIN-----------WGP------------ 87 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEe-----------cCc------------
Confidence 3589999999999999999999999999999999999 8998898887643 133
Q ss_pred cCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCccccccc
Q 044553 147 LCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKL 189 (275)
Q Consensus 147 ~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~ 189 (275)
|...+..++.+++.. +++++||||+..|+..++.+
T Consensus 88 -------k~~~i~~~~~~l~i~-~~~~vfidD~~~d~~~~~~~ 122 (320)
T TIGR01686 88 -------KSESLRKIAKKLNLG-TDSFLFIDDNPAERANVKIT 122 (320)
T ss_pred -------hHHHHHHHHHHhCCC-cCcEEEECCCHHHHHHHHHH
Confidence 567888888887765 58999999999999777553
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.2e-11 Score=105.88 Aligned_cols=133 Identities=8% Similarity=-0.051 Sum_probs=90.6
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCC
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPN 151 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~ 151 (275)
.|+++.+.++.|++.+++++|+||.........+..+|+..+|+.+.+.... .....+||.|
T Consensus 121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~~~~~i~~~~~~---~~~~~gKP~p--------------- 182 (257)
T TIGR01458 121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGPFVTALEYATDT---KATVVGKPSK--------------- 182 (257)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchHHHHHHHHHhCC---CceeecCCCH---------------
Confidence 3578888999999889999999998877666666667777777766643221 1122357755
Q ss_pred CchHHHHHHHHHhhhcCCCCeEEEEcCCC-CCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHH
Q 044553 152 MCKGVVIERIQASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQI 230 (275)
Q Consensus 152 ~~K~~~l~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~ 230 (275)
.+++.++.+++.. +++++||||+. +|+.+|+++|+..+++.++.+..++.... ...+ ...++++.||.++
T Consensus 183 ----~~~~~~~~~~~~~-~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~-~~~p---d~~~~sl~el~~~ 253 (257)
T TIGR01458 183 ----TFFLEALRATGCE-PEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKI-NVPP---DLTCDSLPHAVDL 253 (257)
T ss_pred ----HHHHHHHHHhCCC-hhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhccc-CCCC---CEEECCHHHHHHH
Confidence 5666777766544 58999999995 99999999999877775443332222111 1112 2367899999876
Q ss_pred H
Q 044553 231 L 231 (275)
Q Consensus 231 l 231 (275)
+
T Consensus 254 l 254 (257)
T TIGR01458 254 I 254 (257)
T ss_pred H
Confidence 5
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.1e-10 Score=98.94 Aligned_cols=85 Identities=20% Similarity=0.159 Sum_probs=64.3
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHH--HHHHHcCCcC-CcceEecCCCccCCCCceeecccCCCCCCCCCCCc
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIE--TILEHLGIRD-CFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNL 147 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~--~~l~~~gl~~-~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~ 147 (275)
.++||+.++|++|+++|++++++||+++.... ..++++|+.. +|+.|+++....
T Consensus 24 ~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~----------------------- 80 (242)
T TIGR01459 24 HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIA----------------------- 80 (242)
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHH-----------------------
Confidence 46899999999999999999999999877665 7889999987 899998765421
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccc
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPS 186 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a 186 (275)
...+.+...+.+.. ++++++|||+..|+...
T Consensus 81 -------~~~l~~~~~~~~~~-~~~~~~vGd~~~d~~~~ 111 (242)
T TIGR01459 81 -------VQMILESKKRFDIR-NGIIYLLGHLENDIINL 111 (242)
T ss_pred -------HHHHHhhhhhccCC-CceEEEeCCcccchhhh
Confidence 12333333333332 46899999998888544
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=99.14 E-value=9e-10 Score=96.82 Aligned_cols=77 Identities=8% Similarity=-0.055 Sum_probs=52.3
Q ss_pred CchHHHHHHHHHhhhcCCCCeEEEEcCCC-CCcccccccCCCCeEeecCCchhhHHHhhC-CCceeEEEeeCCChHHHHH
Q 044553 152 MCKGVVIERIQASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRKNFPLWDLIIRN-PMLIKAEIHEWTDGEELEQ 229 (275)
Q Consensus 152 ~~K~~~l~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~el~~ 229 (275)
+++..+++.++..++.. +++++||||+. +||.+|+++|+..+.+..+.+...++.... ...+ ...++++.+|.+
T Consensus 230 KP~p~~~~~a~~~~~~~-~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~p---d~~~~~~~~l~~ 305 (311)
T PLN02645 230 KPSTFMMDYLANKFGIE-KSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQP---DFYTSKISDFLT 305 (311)
T ss_pred CChHHHHHHHHHHcCCC-cccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCC---CEEECCHHHHHH
Confidence 55667888888777654 58999999996 999999999997776644333333332211 1112 336799999887
Q ss_pred HHH
Q 044553 230 ILL 232 (275)
Q Consensus 230 ~l~ 232 (275)
+++
T Consensus 306 ~~~ 308 (311)
T PLN02645 306 LKA 308 (311)
T ss_pred Hhh
Confidence 665
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=99.13 E-value=3.9e-11 Score=103.89 Aligned_cols=105 Identities=14% Similarity=0.159 Sum_probs=69.2
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHHHH-HHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCC
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLFFI-ETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPP 150 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i-~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~ 150 (275)
.|+++.++++.|+++|+ ++|+||...... ...+...|+..+|+.+.+... ......+||+|
T Consensus 144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g---~~~~~~gKP~p-------------- 205 (279)
T TIGR01452 144 SYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTPGTGSLVAAIETASG---RQPLVVGKPSP-------------- 205 (279)
T ss_pred CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhC---CceeccCCCCH--------------
Confidence 47889999999998887 789999775432 122233455555555443211 01112457765
Q ss_pred CCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccccccCCCCeEeecCCc
Q 044553 151 NMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSLKLSEGDHVMPRKNF 201 (275)
Q Consensus 151 ~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~~~~~~~~~~~~~ 201 (275)
..++.++..++.. +++++||||+ .+||.+|+++|+..+.+ .+|.
T Consensus 206 -----~~~~~~~~~~~~~-~~~~lmIGD~~~tDI~~A~~aGi~si~V-~~G~ 250 (279)
T TIGR01452 206 -----YMFECITENFSID-PARTLMVGDRLETDILFGHRCGMTTVLV-LSGV 250 (279)
T ss_pred -----HHHHHHHHHhCCC-hhhEEEECCChHHHHHHHHHcCCcEEEE-CCCC
Confidence 5666666666554 5899999999 59999999999876655 4444
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.6e-10 Score=95.77 Aligned_cols=42 Identities=14% Similarity=0.237 Sum_probs=35.5
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
+.+..|...++.++..++.. ++++++|||+.||+.+...+|.
T Consensus 153 ~~~~~Kg~al~~l~~~~~i~-~~~~i~~GD~~NDi~m~~~ag~ 194 (230)
T PRK01158 153 SPGVNKGTGLKKLAELMGID-PEEVAAIGDSENDLEMFEVAGF 194 (230)
T ss_pred eCCCChHHHHHHHHHHhCCC-HHHEEEECCchhhHHHHHhcCc
Confidence 56778999999999998775 4899999999999999865443
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=99.12 E-value=8.7e-10 Score=93.98 Aligned_cols=85 Identities=13% Similarity=0.120 Sum_probs=61.3
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHH---HHHHHHHHcCCcCC-cceEecCCCccCCCCceeecccCCCCCCCC
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANLF---FIETILEHLGIRDC-FSEINTNPGFVDEEGRLRIFPFHDFTKCSH 143 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~---~i~~~l~~~gl~~~-fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~ 143 (275)
....++||+.++|+.|+++|++++++||+... .....|+.+|+... ++.++..+..
T Consensus 115 ~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~~-------------------- 174 (266)
T TIGR01533 115 AQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKDK-------------------- 174 (266)
T ss_pred CCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCCC--------------------
Confidence 35778999999999999999999999998744 44577888899754 3555543210
Q ss_pred CCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCccc
Q 044553 144 GCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCP 185 (275)
Q Consensus 144 ~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~ 185 (275)
..|....+.+...+ .-+++|||..+|+..
T Consensus 175 --------~~K~~rr~~I~~~y-----~Ivl~vGD~~~Df~~ 203 (266)
T TIGR01533 175 --------SSKESRRQKVQKDY-----EIVLLFGDNLLDFDD 203 (266)
T ss_pred --------CCcHHHHHHHHhcC-----CEEEEECCCHHHhhh
Confidence 11555566555543 458999999999954
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=5.7e-10 Score=95.15 Aligned_cols=114 Identities=21% Similarity=0.144 Sum_probs=72.3
Q ss_pred CCCC-CCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceee---cccCCCCCCCCCC
Q 044553 70 IPIH-PRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRI---FPFHDFTKCSHGC 145 (275)
Q Consensus 70 ~~~~-pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~---kp~~~~~~~~~~~ 145 (275)
+++. |++.++|++|+++|++++|+||+++..+...++.+|+..+|+.|+|++......+.... +-...|...++..
T Consensus 146 v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~ 225 (303)
T PHA03398 146 VRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYL 225 (303)
T ss_pred cccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCcccccccceeecccceeEEecCceeE
Confidence 4444 99999999999999999999999999999999999999999999998875433210000 0000022222323
Q ss_pred CcCC-CCCchH-HHHHHHHHhhhcCCCCeEEEEcCC-CCCc
Q 044553 146 NLCP-PNMCKG-VVIERIQASLSKEGNKKIIYLGDG-SGDY 183 (275)
Q Consensus 146 ~~~~-~~~~K~-~~l~~~~~~~~~~~~~~~i~vGDs-~~Di 183 (275)
+.-. .+.+|. +++-.++.+.+..-.+.+-.|.|= .||+
T Consensus 226 d~~~~~~lPKSprvVl~yL~~~gvn~~KtiTLVDDl~~Nn~ 266 (303)
T PHA03398 226 DVTDVKNLPKSPRVVLWYLRKKGVNYFKTITLVDDLKSNNY 266 (303)
T ss_pred eCCcccCCCCCCeehHHHHHHcCcceeccEEEeccCcccCc
Confidence 2211 122332 455555555554334566677775 4555
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.2e-09 Score=92.96 Aligned_cols=77 Identities=14% Similarity=0.027 Sum_probs=52.1
Q ss_pred CchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHH
Q 044553 152 MCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQI 230 (275)
Q Consensus 152 ~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~ 230 (275)
++-..+++..+...+.. +++++||||+ .+||.+|.++|+..+.+..+-+..+++- ..+..| .+.+++..++...
T Consensus 190 KP~~~i~~~al~~~~~~-~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~-~~~~~p---~~v~~sl~~~~~~ 264 (269)
T COG0647 190 KPSPAIYEAALEKLGLD-RSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLD-RAEVKP---TYVVDSLAELITA 264 (269)
T ss_pred CCCHHHHHHHHHHhCCC-cccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhh-hhccCC---cchHhhHHHHHhh
Confidence 34457777777777654 3799999999 7899999999997666665555444432 222222 3366788887776
Q ss_pred HHH
Q 044553 231 LLH 233 (275)
Q Consensus 231 l~~ 233 (275)
+..
T Consensus 265 ~~~ 267 (269)
T COG0647 265 LKE 267 (269)
T ss_pred hhc
Confidence 654
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.3e-09 Score=91.33 Aligned_cols=51 Identities=12% Similarity=0.182 Sum_probs=40.1
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCC-CCcccccccCCCCeEeecCCc
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRKNF 201 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~~~ 201 (275)
.++++..+++.++..++.. +++++||||+. +||.+|+++|+..+++.++..
T Consensus 176 ~gKP~~~~~~~~~~~~~~~-~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~ 227 (249)
T TIGR01457 176 IGKPNAIIMEKAVEHLGTE-REETLMVGDNYLTDIRAGIDAGIDTLLVHTGVT 227 (249)
T ss_pred cCCChHHHHHHHHHHcCCC-cccEEEECCCchhhHHHHHHcCCcEEEEcCCCC
Confidence 3456678899888887654 58999999996 899999999998777654433
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=99.01 E-value=3.2e-10 Score=89.99 Aligned_cols=105 Identities=18% Similarity=0.221 Sum_probs=61.0
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeC-CCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCC
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSD-ANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCN 146 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~-~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~ 146 (275)
..+.+||++.++|++|+++|++++++|- .....++.+|+.+++........+....++. ... +|
T Consensus 42 ~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~---~eI--~~---------- 106 (169)
T PF12689_consen 42 EEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDY---LEI--YP---------- 106 (169)
T ss_dssp -EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECE---EEE--SS----------
T ss_pred CEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcch---hhe--ec----------
Confidence 5688999999999999999999999995 4567999999999998221112221111100 011 11
Q ss_pred cCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCC
Q 044553 147 LCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGD 193 (275)
Q Consensus 147 ~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~ 193 (275)
.+|..-++.+.++.++. +++++++.|....+....++|...
T Consensus 107 -----gsK~~Hf~~i~~~tgI~-y~eMlFFDDe~~N~~~v~~lGV~~ 147 (169)
T PF12689_consen 107 -----GSKTTHFRRIHRKTGIP-YEEMLFFDDESRNIEVVSKLGVTC 147 (169)
T ss_dssp -----S-HHHHHHHHHHHH----GGGEEEEES-HHHHHHHHTTT-EE
T ss_pred -----CchHHHHHHHHHhcCCC-hhHEEEecCchhcceeeEecCcEE
Confidence 24889999999888775 689999999977675555556533
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=8e-09 Score=87.81 Aligned_cols=72 Identities=10% Similarity=0.075 Sum_probs=49.2
Q ss_pred CCchHHHHHHHHHhhhcCCCCeEEEEcCCC-CCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHH
Q 044553 151 NMCKGVVIERIQASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEEL 227 (275)
Q Consensus 151 ~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el 227 (275)
++++...++.++..++.. +++|+||||+. +|+.+|+++|...+.+..+.+...++ .+....+ ...++++.|+
T Consensus 173 gKP~~~~~~~~~~~~~~~-~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l-~~~~~~p---d~~~~sl~el 245 (248)
T PRK10444 173 GKPSPWIIRAALNKMQAH-SEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDI-DSMPFRP---SWIYPSVADI 245 (248)
T ss_pred CCCCHHHHHHHHHHcCCC-cccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHH-hcCCCCC---CEEECCHHHh
Confidence 456778899988887654 58999999996 89999999998766664443333333 2211122 2357788776
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.2e-08 Score=87.48 Aligned_cols=78 Identities=17% Similarity=0.196 Sum_probs=50.2
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHH
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEEL 227 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el 227 (275)
-+.+..|..+++.++..++.. +++++++|||.||+.+-.. ++..++-++. . +.+.+.... +..-.+-.-+
T Consensus 184 ~~~g~~K~~al~~l~~~lgi~-~~~v~afGD~~ND~~Ml~~---ag~gvam~Na-~-~~~k~~A~~----vt~~n~~~Gv 253 (264)
T COG0561 184 TPKGVSKGYALQRLAKLLGIK-LEEVIAFGDSTNDIEMLEV---AGLGVAMGNA-D-EELKELADY----VTTSNDEDGV 253 (264)
T ss_pred ecCCCchHHHHHHHHHHhCCC-HHHeEEeCCccccHHHHHh---cCeeeeccCC-C-HHHHhhCCc----ccCCccchHH
Confidence 477889999999999988876 5799999999999988854 4444443333 1 222221111 1133455566
Q ss_pred HHHHHHHH
Q 044553 228 EQILLHLV 235 (275)
Q Consensus 228 ~~~l~~~~ 235 (275)
.+.|++++
T Consensus 254 ~~~l~~~~ 261 (264)
T COG0561 254 AEALEKLL 261 (264)
T ss_pred HHHHHHHh
Confidence 66666554
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.3e-09 Score=89.17 Aligned_cols=116 Identities=16% Similarity=0.240 Sum_probs=71.3
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCC-CCceeecccC---------------
Q 044553 73 HPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDE-EGRLRIFPFH--------------- 136 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~-~g~~~~kp~~--------------- 136 (275)
.|...+.|++|++.|++++++|+.+...++.+++.++++.++ |.++...+-. .+.....+..
T Consensus 20 ~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~--i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 20 SERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPV--VAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcE--EEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 456678888888888999999988888888888888876331 1111111000 0000000000
Q ss_pred -CC--------------------------------CCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCc
Q 044553 137 -DF--------------------------------TKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDY 183 (275)
Q Consensus 137 -~~--------------------------------~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di 183 (275)
.+ ....+..+..+.+..|...++.++..++.. ++++++||||.||+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~-~~~~i~iGDs~ND~ 176 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIK-PEEVAAIGDSENDI 176 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCC-HHHEEEECCCHHHH
Confidence 00 000000011256788999999999988765 37899999999999
Q ss_pred ccccccCC
Q 044553 184 CPSLKLSE 191 (275)
Q Consensus 184 ~~a~~~~~ 191 (275)
.+...++.
T Consensus 177 ~ml~~ag~ 184 (215)
T TIGR01487 177 DLFRVVGF 184 (215)
T ss_pred HHHHhCCC
Confidence 99865543
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=1e-08 Score=88.18 Aligned_cols=93 Identities=13% Similarity=0.096 Sum_probs=58.4
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeCCCH-----HHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCc
Q 044553 73 HPRVVPAIKSAHALGCELRIVSDANL-----FFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNL 147 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~~~~IvS~~~~-----~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~ 147 (275)
++++.+++..++..+..+.++++... ...+.+.+.+++. ...+.... +..
T Consensus 139 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~s~~~~------~ei--------------- 193 (272)
T PRK10530 139 FTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHELGLE----CEWSWHDQ------VDI--------------- 193 (272)
T ss_pred eEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhcCce----EEEecCce------EEE---------------
Confidence 56677778777777777777776542 2233333443432 11111110 111
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
.+.+..|...++.++..++.. ++++++|||+.||+.++..+|.
T Consensus 194 ~~~~~~K~~~l~~l~~~~gi~-~~e~i~~GD~~NDi~m~~~ag~ 236 (272)
T PRK10530 194 ARKGNSKGKRLTQWVEAQGWS-MKNVVAFGDNFNDISMLEAAGL 236 (272)
T ss_pred ecCCCChHHHHHHHHHHcCCC-HHHeEEeCCChhhHHHHHhcCc
Confidence 123345999999999998875 4899999999999999977664
|
|
| >COG4996 Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.91 E-value=5.1e-09 Score=77.64 Aligned_cols=85 Identities=21% Similarity=0.205 Sum_probs=68.8
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCc
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNL 147 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~ 147 (275)
.++.++|.+++++.+++..|+-+..+|=+..+-+-..|+.+++..||+.++ .+|+|.
T Consensus 38 ~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFhy~V-------------iePhP~---------- 94 (164)
T COG4996 38 REVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFHYIV-------------IEPHPY---------- 94 (164)
T ss_pred eEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEEEEE-------------ecCCCh----------
Confidence 458899999999999999999999999778888888999999999999876 367775
Q ss_pred CCCCCchHHHHHHHHHhhhc-----CCCCeEEEEcCCCC
Q 044553 148 CPPNMCKGVVIERIQASLSK-----EGNKKIIYLGDGSG 181 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~-----~~~~~~i~vGDs~~ 181 (275)
|..++.+++...+. ..|++++|+.|..-
T Consensus 95 ------K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~i 127 (164)
T COG4996 95 ------KFLMLSQLLREINTERNQKIKPSEIVYLDDRRI 127 (164)
T ss_pred ------hHHHHHHHHHHHHHhhccccCcceEEEEecccc
Confidence 66777776654321 13689999999743
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.90 E-value=7.6e-09 Score=86.53 Aligned_cols=43 Identities=19% Similarity=0.240 Sum_probs=36.6
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
++.+..|...++.++..++.. ++++++|||+.||+.+...+|.
T Consensus 144 ~~~~~~K~~~i~~l~~~~~i~-~~~~i~~GD~~NDi~m~~~ag~ 186 (225)
T TIGR01482 144 LPQGVNKGVAVKKLKEKLGIK-PGETLVCGDSENDIDLFEVPGF 186 (225)
T ss_pred eeCCCCHHHHHHHHHHHhCCC-HHHEEEECCCHhhHHHHHhcCc
Confidence 467788999999999988776 4899999999999999966443
|
catalyze the same reaction as SPP. |
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.2e-08 Score=88.18 Aligned_cols=122 Identities=19% Similarity=0.278 Sum_probs=80.5
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHc-C-------CcCCcceEecCCCcc--CCCCceeecccCCCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHL-G-------IRDCFSEINTNPGFV--DEEGRLRIFPFHDFT 139 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~-g-------l~~~fd~i~~~~~~~--~~~g~~~~kp~~~~~ 139 (275)
+.++||+.++|+.|+++|++++|+||++..+++.+++.+ | +.++||.|++..... -.++ +|.-...
T Consensus 183 v~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~----~pf~~v~ 258 (343)
T TIGR02244 183 VLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEG----RPFRQVD 258 (343)
T ss_pred hccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCC----CceEEEe
Confidence 678999999999999999999999999999999999996 7 899999999875421 0111 1111000
Q ss_pred --------CCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCccccc-ccCCCCeEeec
Q 044553 140 --------KCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSL-KLSEGDHVMPR 198 (275)
Q Consensus 140 --------~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~-~~~~~~~~~~~ 198 (275)
........ .....+-.+..+....+.. +++++||||+ .+||..++ .+||..+++..
T Consensus 259 ~~~g~~~~~~~~~l~~--g~vY~gGn~~~~~~~l~~~-~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p 324 (343)
T TIGR02244 259 VETGSLKWGEVDGLEP--GKVYSGGSLKQFHELLKWR-GKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP 324 (343)
T ss_pred CCCCcccCCccccccC--CCeEeCCCHHHHHHHHCCC-CCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence 00000000 0000111222333333344 3799999999 68999887 78888877664
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.5e-08 Score=78.99 Aligned_cols=97 Identities=15% Similarity=0.113 Sum_probs=66.2
Q ss_pred CCCCCCHHHHHHHHHHcCC--cEEEEeCCC-------HHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCC
Q 044553 70 IPIHPRVVPAIKSAHALGC--ELRIVSDAN-------LFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTK 140 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~--~~~IvS~~~-------~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~ 140 (275)
..+.|.+.+.+++|++.+. +++|+||+. ...++.+-+.+|+. ++... ..||.
T Consensus 58 ~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp-----vl~h~---------~kKP~----- 118 (168)
T PF09419_consen 58 DEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP-----VLRHR---------AKKPG----- 118 (168)
T ss_pred CcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc-----EEEeC---------CCCCc-----
Confidence 3456777788888888865 499999984 66777777888874 32211 12542
Q ss_pred CCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccccccCCCCeEee
Q 044553 141 CSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSLKLSEGDHVMP 197 (275)
Q Consensus 141 ~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~~~~~~~~~ 197 (275)
|..++++.+........|+++++|||. .+|+.+|..+|.-.+++.
T Consensus 119 ------------~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~ 164 (168)
T PF09419_consen 119 ------------CFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVT 164 (168)
T ss_pred ------------cHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEe
Confidence 245666666543222236899999999 789999988886666554
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.5e-08 Score=95.95 Aligned_cols=117 Identities=19% Similarity=0.202 Sum_probs=83.8
Q ss_pred CCCCCCHHHHHHHHHHcC-CcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcC
Q 044553 70 IPIHPRVVPAIKSAHALG-CELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLC 148 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g-~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~ 148 (275)
..++||+.++|++|+++| ++++|+||.+...++.+++++|++++|..+. |
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~~---------------p-------------- 433 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAELL---------------P-------------- 433 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccCC---------------H--------------
Confidence 579999999999999999 9999999999999999999999976654331 1
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHH
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELE 228 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~ 228 (275)
..|...++++... +.+++||||+.+|+.++++++ +.++.+ .+ .+........ +..=+++..|.
T Consensus 434 ---~~K~~~v~~l~~~-----~~~v~~vGDg~nD~~al~~A~---vgia~g-~~-~~~~~~~Ad~----vi~~~~~~~l~ 496 (556)
T TIGR01525 434 ---EDKLAIVKELQEE-----GGVVAMVGDGINDAPALAAAD---VGIAMG-AG-SDVAIEAADI----VLLNDDLSSLP 496 (556)
T ss_pred ---HHHHHHHHHHHHc-----CCEEEEEECChhHHHHHhhCC---EeEEeC-CC-CHHHHHhCCE----EEeCCCHHHHH
Confidence 1267888887753 369999999999999997655 444433 21 2333222222 22235677766
Q ss_pred HHHH
Q 044553 229 QILL 232 (275)
Q Consensus 229 ~~l~ 232 (275)
+.++
T Consensus 497 ~~i~ 500 (556)
T TIGR01525 497 TAID 500 (556)
T ss_pred HHHH
Confidence 6554
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.5e-08 Score=80.63 Aligned_cols=89 Identities=15% Similarity=0.080 Sum_probs=65.7
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcC-CcceEecCCCccCCCCceeecccCCCCCCCCCCCcC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRD-CFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLC 148 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~-~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~ 148 (275)
+...||+.++|++|.+. +.++|.|+++..+++.++++++... +|+.+++.+..... ++.-
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~~------~~~~------------ 101 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVFT------NGKY------------ 101 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEEe------CCCE------------
Confidence 56789999999999987 9999999999999999999999875 88888776543211 1110
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccc
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLK 188 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~ 188 (275)
...+..+ +. +++++++|||++.|+.++..
T Consensus 102 ------~K~L~~l----~~-~~~~vIiVDD~~~~~~~~~~ 130 (162)
T TIGR02251 102 ------VKDLSLV----GK-DLSKVIIIDNSPYSYSLQPD 130 (162)
T ss_pred ------EeEchhc----CC-ChhhEEEEeCChhhhccCcc
Confidence 0111122 22 25799999999999977643
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.8e-08 Score=94.96 Aligned_cols=118 Identities=19% Similarity=0.193 Sum_probs=84.6
Q ss_pred CCCCCCHHHHHHHHHHcCC-cEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcC
Q 044553 70 IPIHPRVVPAIKSAHALGC-ELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLC 148 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~-~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~ 148 (275)
..++||+.++|++|+++|+ +++++||.+...++.+++++|++++|..+. |.
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~---------------p~------------- 412 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELL---------------PE------------- 412 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccC---------------cH-------------
Confidence 5789999999999999999 999999999999999999999987654321 11
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHH
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELE 228 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~ 228 (275)
.|...++++..+ .++++||||+.+|+.+++.++ +.++.+..+ .+........ +..-+++.+|.
T Consensus 413 ----~K~~~i~~l~~~-----~~~v~~vGDg~nD~~al~~A~---vgia~g~~~-~~~~~~~ad~----vl~~~~l~~l~ 475 (536)
T TIGR01512 413 ----DKLEIVKELREK-----YGPVAMVGDGINDAPALAAAD---VGIAMGASG-SDVAIETADV----VLLNDDLSRLP 475 (536)
T ss_pred ----HHHHHHHHHHhc-----CCEEEEEeCCHHHHHHHHhCC---EEEEeCCCc-cHHHHHhCCE----EEECCCHHHHH
Confidence 277888888754 369999999999999986654 444433121 1222222211 22337788876
Q ss_pred HHHH
Q 044553 229 QILL 232 (275)
Q Consensus 229 ~~l~ 232 (275)
+.++
T Consensus 476 ~~i~ 479 (536)
T TIGR01512 476 QAIR 479 (536)
T ss_pred HHHH
Confidence 6544
|
. |
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=98.76 E-value=6.7e-09 Score=82.20 Aligned_cols=84 Identities=25% Similarity=0.340 Sum_probs=52.4
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCC----C----------HHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCC
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDA----N----------LFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHD 137 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~----~----------~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~ 137 (275)
.+|++.+.|+.|++.||.++|+||. . ...+..+++.+++. + .++++... + .-.||
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip--~-~~~~a~~~---d--~~RKP--- 98 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIP--I-QVYAAPHK---D--PCRKP--- 98 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS---E-EEEECGCS---S--TTSTT---
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCc--e-EEEecCCC---C--CCCCC---
Confidence 3468999999999999999999984 1 13356667777765 2 23332210 0 12244
Q ss_pred CCCCCCCCCcCCCCCchHHHHHHHHHhhhc---CCCCeEEEEcCCCCC
Q 044553 138 FTKCSHGCNLCPPNMCKGVVIERIQASLSK---EGNKKIIYLGDGSGD 182 (275)
Q Consensus 138 ~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~---~~~~~~i~vGDs~~D 182 (275)
+.-+++.+...++. ...++++||||+..+
T Consensus 99 ----------------~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr 130 (159)
T PF08645_consen 99 ----------------NPGMWEFALKDYNDGVEIDLANSFYVGDAAGR 130 (159)
T ss_dssp ----------------SSHHHHHHCCCTSTT--S-CCC-EEEESSCHC
T ss_pred ----------------chhHHHHHHHhccccccccccceEEEeccCCC
Confidence 34777777777653 235799999997555
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.75 E-value=5.2e-09 Score=80.24 Aligned_cols=78 Identities=21% Similarity=0.234 Sum_probs=62.6
Q ss_pred HHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHH
Q 044553 79 AIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVI 158 (275)
Q Consensus 79 ~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l 158 (275)
-|+.|.+.|++++|+|+.....++..++.+|+..+ + +++ ..|..++
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~----~------------qG~------------------~dK~~a~ 88 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHL----Y------------QGI------------------SDKLAAF 88 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCcee----e------------ech------------------HhHHHHH
Confidence 46777889999999999999999999999999743 3 111 1278999
Q ss_pred HHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 159 ERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 159 ~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
+.++.+++.. ++++.|+||-.+|+..-...|.
T Consensus 89 ~~L~~~~~l~-~e~~ayiGDD~~Dlpvm~~vGl 120 (170)
T COG1778 89 EELLKKLNLD-PEEVAYVGDDLVDLPVMEKVGL 120 (170)
T ss_pred HHHHHHhCCC-HHHhhhhcCccccHHHHHHcCC
Confidence 9999998876 5899999999999965544443
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.70 E-value=4.1e-08 Score=82.86 Aligned_cols=47 Identities=21% Similarity=0.225 Sum_probs=38.5
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
+.+..|..+++.++..++... +++++|||+.||+.+... ++..++-+
T Consensus 182 ~~~vsK~~ai~~l~~~~~i~~-~~~~~~GD~~ND~~Ml~~---~~~~~am~ 228 (254)
T PF08282_consen 182 PKGVSKGSAIKYLLEYLGISP-EDIIAFGDSENDIEMLEL---AGYSVAMG 228 (254)
T ss_dssp ETTSSHHHHHHHHHHHHTTSG-GGEEEEESSGGGHHHHHH---SSEEEEET
T ss_pred eCCCCHHHHHHHHhhhccccc-ceeEEeecccccHhHHhh---cCeEEEEc
Confidence 678889999999999888764 899999999999998855 45555544
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=98.69 E-value=4e-07 Score=84.42 Aligned_cols=165 Identities=18% Similarity=0.126 Sum_probs=92.8
Q ss_pred ceEEEEEcCCcccCCcc-HH-HHHHHhCCChHH------------HhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHH-
Q 044553 3 GIVVIFDFDKTIIDCDS-DN-FVVDELGATDLF------------NQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVL- 67 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~-~~-~~~~~~g~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 67 (275)
..+++|||||||+.+++ +. .++-.++..... ........-....+.++... -.+.+.+++.+..
T Consensus 22 ~~~~~FDfDGTLt~~~s~f~~Fll~A~~~~~~~r~lllll~~P~~~l~~~~~~~~~~~~~l~~~~-f~G~~~~el~~~~r 100 (497)
T PLN02177 22 NQTVAADLDGTLLISRSAFPYYLLVALEAGSLLRALILLLSVPFVYFTYLFISESLAIKTFVFIA-FAGLKIRDIELVSR 100 (497)
T ss_pred ccEEEEecCCcccCCCCccHHHHHHHcccchHHHHHHHHHHhHHHHHHHhcCCchhHHHHHHHHH-HcCCCHHHHHHHHH
Confidence 35799999999999764 32 222222211110 11100111122233333322 2355555553322
Q ss_pred ---hc---CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHH-cCCcCCcceEecCCCccCCCCceeecccCCCCC
Q 044553 68 ---KR---IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEH-LGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTK 140 (275)
Q Consensus 68 ---~~---~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~-~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~ 140 (275)
.+ -.++|.+.+ .++++|.. +|+|++++.+++.+++. +|++ .+++++...+.+|.++++....
T Consensus 101 ~~l~~f~~~~l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~LGid----~VIgTeLev~~~G~~TG~i~g~--- 169 (497)
T PLN02177 101 SVLPKFYAEDVHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFLGAD----KVLGTELEVSKSGRATGFMKKP--- 169 (497)
T ss_pred HHHHHHHHHhcCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcCCCC----EEEecccEECcCCEEeeeecCC---
Confidence 11 225565555 44567754 99999999999999986 7874 7888887765678888875331
Q ss_pred CCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccC
Q 044553 141 CSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLS 190 (275)
Q Consensus 141 ~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~ 190 (275)
. |--+..|...+++ .++.. . ..+++|||.+|..+...++
T Consensus 170 --~----~c~Ge~Kv~rl~~---~~g~~-~-~~~aYgDS~sD~plL~~a~ 208 (497)
T PLN02177 170 --G----VLVGDHKRDAVLK---EFGDA-L-PDLGLGDRETDHDFMSICK 208 (497)
T ss_pred --C----CCccHHHHHHHHH---HhCCC-C-ceEEEECCccHHHHHHhCC
Confidence 0 0112337776663 33222 1 2389999999996654433
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=6.1e-07 Score=77.17 Aligned_cols=77 Identities=14% Similarity=0.107 Sum_probs=53.2
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCccccccc-CCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHH
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKL-SEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEEL 227 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el 227 (275)
+.+..|..++++++..++... ++++++||+.||+.+-..+ +..++.++-++. ...| -...++..++
T Consensus 170 p~g~~Kg~al~~ll~~~~~~~-~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a-----------~~~A-~~~l~~~~~v 236 (266)
T PRK10187 170 PRGTNKGEAIAAFMQEAPFAG-RTPVFVGDDLTDEAGFAVVNRLGGISVKVGTG-----------ATQA-SWRLAGVPDV 236 (266)
T ss_pred CCCCCHHHHHHHHHHhcCCCC-CeEEEEcCCccHHHHHHHHHhcCCeEEEECCC-----------CCcC-eEeCCCHHHH
Confidence 567789999999999887653 7899999999999765443 111333322211 1223 2367899999
Q ss_pred HHHHHHHHHHh
Q 044553 228 EQILLHLVNTI 238 (275)
Q Consensus 228 ~~~l~~~~~~~ 238 (275)
..+|+.+....
T Consensus 237 ~~~L~~l~~~~ 247 (266)
T PRK10187 237 WSWLEMITTAQ 247 (266)
T ss_pred HHHHHHHHHhh
Confidence 99999988544
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=98.67 E-value=8.2e-08 Score=79.12 Aligned_cols=43 Identities=19% Similarity=0.241 Sum_probs=35.7
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
-+.+..|..+++.++.+++.. +++++++||+.||+.++..++.
T Consensus 158 ~p~~~~K~~~~~~~~~~~~~~-~~~~~~~GD~~nD~~~~~~~~~ 200 (204)
T TIGR01484 158 LPAGVDKGSALQALLKELNGK-RDEILAFGDSGNDEEMFEVAGL 200 (204)
T ss_pred ecCCCChHHHHHHHHHHhCCC-HHHEEEEcCCHHHHHHHHHcCC
Confidence 367889999999999988754 4789999999999988865443
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.5e-07 Score=68.67 Aligned_cols=48 Identities=23% Similarity=0.167 Sum_probs=35.2
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCH---HHHHHHHHHcCCcCCcceEec
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANL---FFIETILEHLGIRDCFSEINT 119 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~---~~i~~~l~~~gl~~~fd~i~~ 119 (275)
++||+.++|++|+++|.+++++||++. ......|+.+|+.--.+.|++
T Consensus 15 ~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~t 65 (101)
T PF13344_consen 15 PIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIIT 65 (101)
T ss_dssp E-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEE
T ss_pred cCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEC
Confidence 589999999999999999999999753 345556678898744455654
|
... |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.65 E-value=2.4e-07 Score=87.88 Aligned_cols=83 Identities=19% Similarity=0.324 Sum_probs=68.4
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCP 149 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~ 149 (275)
.+++||+.++|++|+++|++++++||.....++.+++++|++ +++. .+|.
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-----~~~~-----------~~p~-------------- 453 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-----VRAE-----------VLPD-------------- 453 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-----EEcc-----------CChH--------------
Confidence 578999999999999999999999999999999999999995 2221 1221
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccC
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLS 190 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~ 190 (275)
.|.+.++++..+ +++|+||||+.||+.++++++
T Consensus 454 ---~K~~~v~~l~~~-----~~~v~~VGDg~nD~~al~~A~ 486 (562)
T TIGR01511 454 ---DKAALIKELQEK-----GRVVAMVGDGINDAPALAQAD 486 (562)
T ss_pred ---HHHHHHHHHHHc-----CCEEEEEeCCCccHHHHhhCC
Confidence 278888888763 479999999999999986654
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=98.63 E-value=5.1e-07 Score=75.14 Aligned_cols=131 Identities=17% Similarity=0.027 Sum_probs=80.9
Q ss_pred ceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHH--hcCCCCCCHHHHH
Q 044553 3 GIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVL--KRIPIHPRVVPAI 80 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~pg~~e~L 80 (275)
+.+++||+|.|++++.+.... .++ +.. ..+...+.+++ ...++.|++.+++
T Consensus 77 ~~A~V~DIDET~LsN~py~~~---~~~--------g~~----------------~~~~~~~~~wv~~~~apaip~al~l~ 129 (229)
T TIGR01675 77 MDAWIFDVDDTLLSNIPYYKK---HGY--------GTE----------------KTDPTAFWLWLGKGAAPALPEGLKLY 129 (229)
T ss_pred CcEEEEccccccccCHHHHHH---hcc--------CCC----------------cCCHHHHHHHHHcCCCCCCHHHHHHH
Confidence 579999999999998552111 111 000 11122222222 3578899999999
Q ss_pred HHHHHcCCcEEEEeCCCHHH---HHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHH
Q 044553 81 KSAHALGCELRIVSDANLFF---IETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVV 157 (275)
Q Consensus 81 ~~L~~~g~~~~IvS~~~~~~---i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~ 157 (275)
+.|+++|++++++|+.+... ...-|.+.|+..+ +.++-.+..- ..+.. -..|.+.
T Consensus 130 ~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-~~LiLR~~~d------~~~~~---------------~~yKs~~ 187 (229)
T TIGR01675 130 QKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-KHLILRGLED------SNKTV---------------VTYKSEV 187 (229)
T ss_pred HHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-CeeeecCCCC------CCchH---------------hHHHHHH
Confidence 99999999999999998766 6667777888654 4444321100 00100 0115565
Q ss_pred HHHHHHhhhcCCCCeEEEEcCCCCCcccc
Q 044553 158 IERIQASLSKEGNKKIIYLGDGSGDYCPS 186 (275)
Q Consensus 158 l~~~~~~~~~~~~~~~i~vGDs~~Di~~a 186 (275)
.+++..+ +..-+..|||..+|+...
T Consensus 188 R~~l~~~----GYrIv~~iGDq~sDl~G~ 212 (229)
T TIGR01675 188 RKSLMEE----GYRIWGNIGDQWSDLLGS 212 (229)
T ss_pred HHHHHhC----CceEEEEECCChHHhcCC
Confidence 5555543 455566799999999643
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.62 E-value=2.3e-07 Score=73.36 Aligned_cols=103 Identities=14% Similarity=0.173 Sum_probs=62.0
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHHHHH---HHHHHc---C--CcCCcceEecCCCccCC--CCceeecccCCCCCC
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLFFIE---TILEHL---G--IRDCFSEINTNPGFVDE--EGRLRIFPFHDFTKC 141 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~---~~l~~~---g--l~~~fd~i~~~~~~~~~--~g~~~~kp~~~~~~~ 141 (275)
..|++.++++.++++|++++++|+.+...+. ..++.+ | +. ...++++...... .+.. ....+
T Consensus 28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp--~g~li~~~g~~~~~~~~e~-i~~~~----- 99 (157)
T smart00775 28 THPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLP--HGPVLLSPDRLFAALHREV-ISKKP----- 99 (157)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCC--CceEEEcCCcchhhhhccc-ccCCH-----
Confidence 4699999999999999999999999877664 666662 2 32 1245544432110 0000 00001
Q ss_pred CCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 142 SHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 142 ~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
..-|...++.+...+......-+..+||+.+|+.+-..+|.
T Consensus 100 ---------~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi 140 (157)
T smart00775 100 ---------EVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGI 140 (157)
T ss_pred ---------HHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCC
Confidence 11277888888875532222234458888999976655444
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=98.61 E-value=6.3e-09 Score=88.24 Aligned_cols=98 Identities=10% Similarity=0.024 Sum_probs=71.6
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceE--ecCCCccCCCCceeecccCCCCCCCCCCCcCCC
Q 044553 73 HPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEI--NTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPP 150 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i--~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~ 150 (275)
++++.++++.|+++|+++ |+||....+....+..+|...+|..+ ++.+. ...+||+|
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~~~------~~~gKP~~-------------- 198 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGYYAELIKQLGGKV------IYSGKPYP-------------- 198 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccHHHHHHHHhCCcE------ecCCCCCH--------------
Confidence 688899999998899997 88999887776666777776666644 33221 12457765
Q ss_pred CCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccccccCCCCeEe
Q 044553 151 NMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSLKLSEGDHVM 196 (275)
Q Consensus 151 ~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~~~~~~~~ 196 (275)
..++.++.+++..++++++||||+ .+|+.+|+++|...+++
T Consensus 199 -----~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v 240 (242)
T TIGR01459 199 -----AIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDTALV 240 (242)
T ss_pred -----HHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeEEEE
Confidence 566677777654434689999999 69999999888765543
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.59 E-value=4.8e-07 Score=77.33 Aligned_cols=50 Identities=18% Similarity=0.135 Sum_probs=38.7
Q ss_pred CCCCCchHHHHHHHHHhhhcC-CCCeEEEEcCCCCCcccccccCCCCeEeecCC
Q 044553 148 CPPNMCKGVVIERIQASLSKE-GNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKN 200 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~-~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~ 200 (275)
.+.+..|...++.++..+++. ..+++++|||+.||+.+... ++..++-.+
T Consensus 171 ~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~---ag~~vam~N 221 (256)
T TIGR01486 171 LGAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEV---VDLAVVVPG 221 (256)
T ss_pred ecCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHH---CCEEEEeCC
Confidence 467888999999999988764 14799999999999998855 444444333
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=3.2e-07 Score=90.97 Aligned_cols=117 Identities=20% Similarity=0.258 Sum_probs=85.1
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCP 149 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~ 149 (275)
-+++|++.+.|++|++.|++++++|+.....++.+++++|++++|..+ .|.
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~~~---------------~p~-------------- 699 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGV---------------LPD-------------- 699 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEEEeCC---------------CHH--------------
Confidence 468999999999999999999999999999999999999997543211 121
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHH
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQ 229 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~ 229 (275)
.|.++++.+..+ +++++||||+.||+.+++.++. .++.++. . +...+... . ++.-+++.+|..
T Consensus 700 ---~K~~~i~~l~~~-----~~~v~~vGDg~nD~~al~~Agv---gia~g~g-~-~~a~~~ad-~---vl~~~~~~~i~~ 762 (834)
T PRK10671 700 ---GKAEAIKRLQSQ-----GRQVAMVGDGINDAPALAQADV---GIAMGGG-S-DVAIETAA-I---TLMRHSLMGVAD 762 (834)
T ss_pred ---HHHHHHHHHhhc-----CCEEEEEeCCHHHHHHHHhCCe---eEEecCC-C-HHHHHhCC-E---EEecCCHHHHHH
Confidence 278888888654 4689999999999998866544 4443322 1 22222111 1 445688999988
Q ss_pred HHH
Q 044553 230 ILL 232 (275)
Q Consensus 230 ~l~ 232 (275)
.++
T Consensus 763 ~i~ 765 (834)
T PRK10671 763 ALA 765 (834)
T ss_pred HHH
Confidence 886
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.51 E-value=7.3e-07 Score=75.91 Aligned_cols=49 Identities=18% Similarity=0.167 Sum_probs=39.1
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEee
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMP 197 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~ 197 (275)
.+.+.+|...++.++..++.. +++++++||+.||+.+...++...+++.
T Consensus 162 ~~~~~~K~~al~~l~~~~~i~-~~~~i~~GD~~ND~~ml~~~~~~~va~~ 210 (249)
T TIGR01485 162 LPQGSGKGQALQYLLQKLAME-PSQTLVCGDSGNDIELFEIGSVRGVIVS 210 (249)
T ss_pred EeCCCChHHHHHHHHHHcCCC-ccCEEEEECChhHHHHHHccCCcEEEEC
Confidence 467889999999999988765 5899999999999999865343445543
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.1e-06 Score=87.72 Aligned_cols=134 Identities=15% Similarity=0.083 Sum_probs=89.4
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCC----------ceeecccCCCCC
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEG----------RLRIFPFHDFTK 140 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g----------~~~~kp~~~~~~ 140 (275)
+++|++.++++.|++.|+++.++|+.....+..+.+.+|+...++.+++++.....++ .....+.|
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P---- 603 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASP---- 603 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCH----
Confidence 7899999999999999999999999999999999999999877666655433211000 01111112
Q ss_pred CCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEee
Q 044553 141 CSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHE 220 (275)
Q Consensus 141 ~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 220 (275)
..|..+++.+... + +.+.|+||+.||..+.+. +++.++.+ ....+...+.+.. +..
T Consensus 604 -----------~~K~~iv~~lq~~----g-~~v~mvGDGvND~pAl~~---AdVGia~g-~~g~~va~~aaDi----vl~ 659 (884)
T TIGR01522 604 -----------EHKMKIVKALQKR----G-DVVAMTGDGVNDAPALKL---ADIGVAMG-QTGTDVAKEAADM----ILT 659 (884)
T ss_pred -----------HHHHHHHHHHHHC----C-CEEEEECCCcccHHHHHh---CCeeEecC-CCcCHHHHHhcCE----EEc
Confidence 2388888887754 2 689999999999998865 44555532 1112333332221 112
Q ss_pred CCChHHHHHHHH
Q 044553 221 WTDGEELEQILL 232 (275)
Q Consensus 221 ~~~~~el~~~l~ 232 (275)
=+++..+...++
T Consensus 660 dd~~~~i~~~i~ 671 (884)
T TIGR01522 660 DDDFATILSAIE 671 (884)
T ss_pred CCCHHHHHHHHH
Confidence 266888877655
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.8e-06 Score=72.30 Aligned_cols=121 Identities=24% Similarity=0.182 Sum_probs=75.8
Q ss_pred CCCCHHHHHHHHh--cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeec
Q 044553 56 QGKTIEDIVEVLK--RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIF 133 (275)
Q Consensus 56 ~~~~~~~~~~~~~--~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~k 133 (275)
.+.+.+.+.+.++ .+.+++|+.++++.|+++++|+.|.|+|....++.++++.|.-.---.|+||...++.+|...+-
T Consensus 73 ~~l~k~~i~~~V~~s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF 152 (246)
T PF05822_consen 73 QGLTKSEIEEAVKESDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGF 152 (246)
T ss_dssp HT-BGGGHHHHHHCS---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE
T ss_pred cCcCHHHHHHHHHhcchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeec
Confidence 3555555665554 47899999999999999999999999999999999999986432223799999999999987773
Q ss_pred ccCCCCCCCCCCCcCCCCCchHH-HHH--HHHHhhhcCCCCeEEEEcCCCCCccccccc
Q 044553 134 PFHDFTKCSHGCNLCPPNMCKGV-VIE--RIQASLSKEGNKKIIYLGDGSGDYCPSLKL 189 (275)
Q Consensus 134 p~~~~~~~~~~~~~~~~~~~K~~-~l~--~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~ 189 (275)
-.|- .|.. +|.+ ++. .+-.+ ...+.+++..|||..|+.+|..+
T Consensus 153 ~~~l----IH~~-------NKn~~~l~~~~~~~~--~~~R~NvlLlGDslgD~~Ma~G~ 198 (246)
T PF05822_consen 153 KGPL----IHTF-------NKNESALEDSPYFKQ--LKKRTNVLLLGDSLGDLHMADGV 198 (246)
T ss_dssp -SS-------TT--------HHHHHHTTHHHHHC--TTT--EEEEEESSSGGGGTTTT-
T ss_pred CCCc----eEEe-------eCCcccccCchHHHH--hccCCcEEEecCccCChHhhcCC
Confidence 2220 1222 1443 221 11122 22357999999999999999765
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.43 E-value=6.8e-07 Score=77.17 Aligned_cols=63 Identities=24% Similarity=0.342 Sum_probs=53.7
Q ss_pred CCceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHHH
Q 044553 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAI 80 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L 80 (275)
||+|+|++|+||||++.+. .+.+++.++|
T Consensus 2 ~~~kli~~DlDGTLl~~~~---------------------------------------------------~~~~~~~~ai 30 (273)
T PRK00192 2 MMKLLVFTDLDGTLLDHHT---------------------------------------------------YSYEPAKPAL 30 (273)
T ss_pred CcceEEEEcCcccCcCCCC---------------------------------------------------cCcHHHHHHH
Confidence 7889999999999987521 1245677899
Q ss_pred HHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCc
Q 044553 81 KSAHALGCELRIVSDANLFFIETILEHLGIRDCF 114 (275)
Q Consensus 81 ~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~f 114 (275)
+.|+++|++++++||.+...+...++.+|+..++
T Consensus 31 ~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~ 64 (273)
T PRK00192 31 KALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPF 64 (273)
T ss_pred HHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCE
Confidence 9999999999999999999999999999987653
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=8.5e-07 Score=76.28 Aligned_cols=61 Identities=25% Similarity=0.326 Sum_probs=51.4
Q ss_pred CCceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHHH
Q 044553 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAI 80 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L 80 (275)
|++|+|+||+||||++.+. .+.|...+.|
T Consensus 1 m~~kli~~DlDGTLl~~~~---------------------------------------------------~i~~~~~~ai 29 (270)
T PRK10513 1 MAIKLIAIDMDGTLLLPDH---------------------------------------------------TISPAVKQAI 29 (270)
T ss_pred CceEEEEEecCCcCcCCCC---------------------------------------------------ccCHHHHHHH
Confidence 7789999999999987631 1235566889
Q ss_pred HHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcC
Q 044553 81 KSAHALGCELRIVSDANLFFIETILEHLGIRD 112 (275)
Q Consensus 81 ~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~ 112 (275)
++|+++|++++++|+.+...+...++.+++..
T Consensus 30 ~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (270)
T PRK10513 30 AAARAKGVNVVLTTGRPYAGVHRYLKELHMEQ 61 (270)
T ss_pred HHHHHCCCEEEEecCCChHHHHHHHHHhCCCC
Confidence 99999999999999999999999999998753
|
|
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.1e-06 Score=71.43 Aligned_cols=110 Identities=13% Similarity=0.109 Sum_probs=74.4
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCH---------------HHHHHHHHHcCCcCCcceEecC-CCccCCCC----cee
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANL---------------FFIETILEHLGIRDCFSEINTN-PGFVDEEG----RLR 131 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~---------------~~i~~~l~~~gl~~~fd~i~~~-~~~~~~~g----~~~ 131 (275)
+.|.+..++..|++.|++++|||=+.. .+++..++..+-+.-...+++. +...+.+. .-.
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl 155 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLGL 155 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhcc
Confidence 468888999999999999999996543 3677788866554333444431 22111110 011
Q ss_pred ecccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEee
Q 044553 132 IFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMP 197 (275)
Q Consensus 132 ~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~ 197 (275)
.||.|. .|.--+++++.+++.. |+++++|.|+...+.+|.++|+..+.+.
T Consensus 156 ~KPdp~---------------iK~yHle~ll~~~gl~-peE~LFIDD~~~NVeaA~~lGi~ai~f~ 205 (219)
T PTZ00445 156 DAPMPL---------------DKSYHLKQVCSDFNVN-PDEILFIDDDMNNCKNALKEGYIALHVT 205 (219)
T ss_pred cCCCcc---------------chHHHHHHHHHHcCCC-HHHeEeecCCHHHHHHHHHCCCEEEEcC
Confidence 244442 2334458888888776 5899999999999999999998877764
|
|
| >COG4229 Predicted enolase-phosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.37 E-value=4.4e-06 Score=65.82 Aligned_cols=104 Identities=18% Similarity=0.223 Sum_probs=72.4
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHc---CCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHL---GIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCN 146 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~---gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~ 146 (275)
..+||++.+.|++-++.|++++|-|+++-...+-.+.+. ++..+|+..+-... |. |-
T Consensus 102 ahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDtti-----G~---Kr------------ 161 (229)
T COG4229 102 AHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDTTI-----GK---KR------------ 161 (229)
T ss_pred cccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeeccc-----cc---cc------------
Confidence 679999999999999999999999999987777666543 34444444332110 00 10
Q ss_pred cCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCc
Q 044553 147 LCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNF 201 (275)
Q Consensus 147 ~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~ 201 (275)
......++....+.. |.+++++.|.+..+.+|+.+|......+|.|.
T Consensus 162 -------E~~SY~kIa~~iGl~-p~eilFLSDn~~EL~AA~~vGl~t~l~~R~g~ 208 (229)
T COG4229 162 -------ESQSYAKIAGDIGLP-PAEILFLSDNPEELKAAAGVGLATGLAVRPGN 208 (229)
T ss_pred -------cchhHHHHHHhcCCC-chheEEecCCHHHHHHHHhcchheeeeecCCC
Confidence 012233444443333 57999999999999999999998888887653
|
|
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.6e-06 Score=68.38 Aligned_cols=53 Identities=15% Similarity=0.222 Sum_probs=46.3
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc-CCc-ceEecCCC
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR-DCF-SEINTNPG 122 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~-~~f-d~i~~~~~ 122 (275)
.+.++||+.++|++|++. +.++|+|++...++..+++.++.. .+| +.+++.+.
T Consensus 56 ~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~ 110 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDE 110 (156)
T ss_pred EEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEecc
Confidence 467899999999999965 999999999999999999999988 478 66776554
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=98.33 E-value=2.2e-06 Score=71.90 Aligned_cols=91 Identities=16% Similarity=0.142 Sum_probs=57.7
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHH---HHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLF---FIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCN 146 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~---~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~ 146 (275)
..+.||+.++++.++++|+.|+++||.+.. ....-|+..|+..+ +.++- +....+.
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~-~~l~l-----------r~~~~~~--------- 172 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW-DHLIL-----------RPDKDPS--------- 172 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB-SCGEE-----------EEESSTS---------
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc-chhcc-----------ccccccc---------
Confidence 478899999999999999999999997544 44555677786543 33221 1100000
Q ss_pred cCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCccc
Q 044553 147 LCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCP 185 (275)
Q Consensus 147 ~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~ 185 (275)
.+.....|....+.+... +..-+.+|||..+|+..
T Consensus 173 ~~~~~~yK~~~r~~i~~~----Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 173 KKSAVEYKSERRKEIEKK----GYRIIANIGDQLSDFSG 207 (229)
T ss_dssp S------SHHHHHHHHHT----TEEEEEEEESSGGGCHC
T ss_pred cccccccchHHHHHHHHc----CCcEEEEeCCCHHHhhc
Confidence 001112366777776655 23456789999999976
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.32 E-value=3.2e-06 Score=63.00 Aligned_cols=85 Identities=16% Similarity=0.258 Sum_probs=66.4
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcC
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLC 148 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~ 148 (275)
.-.+|+.+.+.|+.|++. +.++|+|+...-.+...++-.|+.- +.+..... +
T Consensus 28 gGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~--~rv~a~a~-------------~------------ 79 (152)
T COG4087 28 GGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPV--ERVFAGAD-------------P------------ 79 (152)
T ss_pred CcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCce--eeeecccC-------------H------------
Confidence 357899999999999999 9999999998889999999889763 24442211 0
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCccccccc
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKL 189 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~ 189 (275)
..|..++..+... .+.|+||||+.||+.+-+.+
T Consensus 80 ---e~K~~ii~eLkk~-----~~k~vmVGnGaND~laLr~A 112 (152)
T COG4087 80 ---EMKAKIIRELKKR-----YEKVVMVGNGANDILALREA 112 (152)
T ss_pred ---HHHHHHHHHhcCC-----CcEEEEecCCcchHHHhhhc
Confidence 1278888888764 47999999999999777553
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.29 E-value=7.7e-06 Score=70.48 Aligned_cols=41 Identities=10% Similarity=0.208 Sum_probs=36.2
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCC
Q 044553 73 HPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDC 113 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~ 113 (275)
.+...+.|++|+++|++++++|+.+...+...++.++++.+
T Consensus 21 ~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~ 61 (272)
T PRK15126 21 GEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAY 61 (272)
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCc
Confidence 45566899999999999999999999999999999998644
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.25 E-value=7.4e-06 Score=70.33 Aligned_cols=46 Identities=13% Similarity=0.023 Sum_probs=38.3
Q ss_pred CCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCC
Q 044553 74 PRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNP 121 (275)
Q Consensus 74 pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~ 121 (275)
+.+.+.|++|+++|++++++|+.+...+..+.+.+++..+ .|..|.
T Consensus 21 ~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p--~I~eNG 66 (302)
T PRK12702 21 GAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHP--FICEDG 66 (302)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCe--EEEeCC
Confidence 4466899999999999999999999999999999998753 444443
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.24 E-value=7.6e-06 Score=78.82 Aligned_cols=90 Identities=27% Similarity=0.392 Sum_probs=72.4
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCP 149 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~ 149 (275)
-++.|++.+.++.|++.|+++.++|+.....++.+.+++|+++++..+ .|.
T Consensus 536 D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~v~Ael---------------lPe-------------- 586 (713)
T COG2217 536 DELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVRAEL---------------LPE-------------- 586 (713)
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHhheccC---------------CcH--------------
Confidence 478999999999999999999999999999999999999996542221 232
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
.|.+.++++..+ + ..+.||||+.||-.+- ..+++.++-+
T Consensus 587 ---dK~~~V~~l~~~----g-~~VamVGDGINDAPAL---A~AdVGiAmG 625 (713)
T COG2217 587 ---DKAEIVRELQAE----G-RKVAMVGDGINDAPAL---AAADVGIAMG 625 (713)
T ss_pred ---HHHHHHHHHHhc----C-CEEEEEeCCchhHHHH---hhcCeeEeec
Confidence 389999999864 2 5899999999998655 3356666644
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=98.23 E-value=5.4e-06 Score=79.58 Aligned_cols=149 Identities=20% Similarity=0.199 Sum_probs=99.5
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCP 149 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~ 149 (275)
-++.|++.+.+++|++.|+++.++|+.....+..+.+++|++++ ++ +.+|.
T Consensus 440 Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~v----~A-----------~~~Pe-------------- 490 (673)
T PRK14010 440 DVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRF----VA-----------ECKPE-------------- 490 (673)
T ss_pred cCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCceE----Ec-----------CCCHH--------------
Confidence 37899999999999999999999999999999999999999743 32 12332
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC-CchhhHHHhhCCCceeEEEeeCCChHHHH
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK-NFPLWDLIIRNPMLIKAEIHEWTDGEELE 228 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~el~ 228 (275)
.|.++++.+..+ + ..+.|+||+.||-.+-++ +++.++-+ |. +...+..+. +..=++|..|.
T Consensus 491 ---dK~~iV~~lQ~~----G-~~VaMtGDGvNDAPALa~---ADVGIAMgsGT---dvAkeAADi----VLldd~ls~Iv 552 (673)
T PRK14010 491 ---DKINVIREEQAK----G-HIVAMTGDGTNDAPALAE---ANVGLAMNSGT---MSAKEAANL----IDLDSNPTKLM 552 (673)
T ss_pred ---HHHHHHHHHHhC----C-CEEEEECCChhhHHHHHh---CCEEEEeCCCC---HHHHHhCCE----EEcCCCHHHHH
Confidence 289999998764 2 578899999999976643 56666643 33 333333222 22225677776
Q ss_pred HHHH---HHHHHhccCCCCCccccc-Ccc--cccccccchhhcccCcc
Q 044553 229 QILL---HLVNTIGSTNNNNSAQLL-SAD--CKLQTISAAAHETLPQV 270 (275)
Q Consensus 229 ~~l~---~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~ 270 (275)
+.++ +++..++- -..++ +.| -=|-.+||..-...|+.
T Consensus 553 ~av~~gR~i~~n~~~-----~~~f~~~~~~~~~~~i~~a~~~~~~~~~ 595 (673)
T PRK14010 553 EVVLIGKQLLMTRGS-----LTTFSIANDIAKYFAILPAMFMAAMPAM 595 (673)
T ss_pred HHHHHHHHHHHHHHH-----HHheeeeccHHHHHHHHHHHHHHhcccc
Confidence 6665 44443311 01221 111 13566787777777763
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=7.9e-06 Score=78.52 Aligned_cols=151 Identities=17% Similarity=0.188 Sum_probs=103.1
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCP 149 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~ 149 (275)
-++.||+.+.++.|++.|+++.++|+.....++.+.+++|+++ +++ +..|.
T Consensus 444 D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~----v~A-----------~~~Pe-------------- 494 (679)
T PRK01122 444 DIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD----FLA-----------EATPE-------------- 494 (679)
T ss_pred ccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE----EEc-----------cCCHH--------------
Confidence 3678999999999999999999999999999999999999964 332 11232
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC-CchhhHHHhhCCCceeEEEeeCCChHHHH
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK-NFPLWDLIIRNPMLIKAEIHEWTDGEELE 228 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~el~ 228 (275)
.|.++++.+..+ + ..+.|+|||.||-.+-++ +++.++-+ |. +...+..+. +..=++|..|.
T Consensus 495 ---dK~~iV~~lQ~~----G-~~VaMtGDGvNDAPALa~---ADVGIAMgsGT---dvAkeAADi----VLldd~~s~Iv 556 (679)
T PRK01122 495 ---DKLALIRQEQAE----G-RLVAMTGDGTNDAPALAQ---ADVGVAMNSGT---QAAKEAGNM----VDLDSNPTKLI 556 (679)
T ss_pred ---HHHHHHHHHHHc----C-CeEEEECCCcchHHHHHh---CCEeEEeCCCC---HHHHHhCCE----EEeCCCHHHHH
Confidence 289999998765 2 578999999999976643 56666543 33 333333222 22236788887
Q ss_pred HHHHHHHHHhccCCCCCcccccCcccc----cccccchhhcccCcc
Q 044553 229 QILLHLVNTIGSTNNNNSAQLLSADCK----LQTISAAAHETLPQV 270 (275)
Q Consensus 229 ~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 270 (275)
+.++ +-.++.+| |-.....|+=|- |--|||..-...|+.
T Consensus 557 ~av~-~GR~~~~t--r~~~~~f~~~n~~~~~~~i~p~~~~~~~~~~ 599 (679)
T PRK01122 557 EVVE-IGKQLLMT--RGALTTFSIANDVAKYFAIIPAMFAATYPQL 599 (679)
T ss_pred HHHH-HHHHHHhh--hHhhhhhhHHHHHHHHHHHHHHHHHhhCccc
Confidence 7765 22333331 222233444454 577898888888874
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.20 E-value=5.5e-06 Score=71.09 Aligned_cols=41 Identities=17% Similarity=0.225 Sum_probs=34.4
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCC
Q 044553 73 HPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDC 113 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~ 113 (275)
.|...+.|++|+++|++++++|+.+...+...++.++++.+
T Consensus 21 s~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~ 61 (266)
T PRK10976 21 SPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSY 61 (266)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCe
Confidence 34566889999999999999999998888888888888643
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.18 E-value=8e-06 Score=79.93 Aligned_cols=114 Identities=17% Similarity=0.143 Sum_probs=80.5
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCP 149 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~ 149 (275)
-+++|++.++|+.|++.|++++++|+.....++.+.+++|++.+ .. ..|.
T Consensus 567 d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~~-----~~-----------~~p~-------------- 616 (741)
T PRK11033 567 DTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFR-----AG-----------LLPE-------------- 616 (741)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCee-----cC-----------CCHH--------------
Confidence 47899999999999999999999999999999999999999522 11 1121
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC-CchhhHHHhhCCCceeEEEeeCCChHHHH
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK-NFPLWDLIIRNPMLIKAEIHEWTDGEELE 228 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~el~ 228 (275)
.|..+++.+.. ...+.||||+.||..+.+.+ ++.++-+ +. +...+... . +..-+++.+|.
T Consensus 617 ---~K~~~v~~l~~------~~~v~mvGDgiNDapAl~~A---~vgia~g~~~---~~a~~~ad-i---vl~~~~l~~l~ 677 (741)
T PRK11033 617 ---DKVKAVTELNQ------HAPLAMVGDGINDAPAMKAA---SIGIAMGSGT---DVALETAD-A---ALTHNRLRGLA 677 (741)
T ss_pred ---HHHHHHHHHhc------CCCEEEEECCHHhHHHHHhC---CeeEEecCCC---HHHHHhCC-E---EEecCCHHHHH
Confidence 28888888763 24799999999999887554 4444433 22 22222221 1 33457777776
Q ss_pred HHHH
Q 044553 229 QILL 232 (275)
Q Consensus 229 ~~l~ 232 (275)
..++
T Consensus 678 ~~i~ 681 (741)
T PRK11033 678 QMIE 681 (741)
T ss_pred HHHH
Confidence 5554
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=98.18 E-value=1.2e-05 Score=77.23 Aligned_cols=151 Identities=16% Similarity=0.156 Sum_probs=100.3
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCP 149 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~ 149 (275)
-++.|++.+.+++|++.|+++.++|+.....+..+.+.+|+++ +++. ..|.
T Consensus 445 D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~----v~a~-----------~~Pe-------------- 495 (675)
T TIGR01497 445 DIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD----FIAE-----------ATPE-------------- 495 (675)
T ss_pred ccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE----EEcC-----------CCHH--------------
Confidence 3788999999999999999999999999999999999999864 3321 1232
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC-CchhhHHHhhCCCceeEEEeeCCChHHHH
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK-NFPLWDLIIRNPMLIKAEIHEWTDGEELE 228 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~el~ 228 (275)
.|.+.++.+..+ ...+.|+||+.||..+-.. +++.++-. +. +...+..+. +..=++|..|.
T Consensus 496 ---dK~~~v~~lq~~-----g~~VamvGDG~NDapAL~~---AdvGiAm~~gt---~~akeaadi----vLldd~~s~Iv 557 (675)
T TIGR01497 496 ---DKIALIRQEQAE-----GKLVAMTGDGTNDAPALAQ---ADVGVAMNSGT---QAAKEAANM----VDLDSDPTKLI 557 (675)
T ss_pred ---HHHHHHHHHHHc-----CCeEEEECCCcchHHHHHh---CCEeEEeCCCC---HHHHHhCCE----EECCCCHHHHH
Confidence 289999998764 2579999999999987744 55555533 33 333332222 22336788877
Q ss_pred HHHHHHHHHhccCCCCCcccccCccc----ccccccchhhcccCcc
Q 044553 229 QILLHLVNTIGSTNNNNSAQLLSADC----KLQTISAAAHETLPQV 270 (275)
Q Consensus 229 ~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 270 (275)
+.++ +-..+-+| |...--.|+=| -|--|||..-...|+.
T Consensus 558 ~av~-~GR~~~~t--~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (675)
T TIGR01497 558 EVVH-IGKQLLIT--RGALTTFSIANDVAKYFAIIPAIFAAAYPQL 600 (675)
T ss_pred HHHH-HHHHHHHH--HHHHheeeecccHHHHHHHHHHHHHhhCcch
Confidence 7665 22222120 11111133333 3667888888888873
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=98.18 E-value=9.9e-06 Score=63.33 Aligned_cols=105 Identities=14% Similarity=0.107 Sum_probs=62.7
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHH---HHHHHHHc-----CCcCCcceEecCCC-ccCCCCceeecccCCCCCC
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFF---IETILEHL-----GIRDCFSEINTNPG-FVDEEGRLRIFPFHDFTKC 141 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~---i~~~l~~~-----gl~~~fd~i~~~~~-~~~~~g~~~~kp~~~~~~~ 141 (275)
..+||+.+++..++++||++.-+|+.+... .+..|... ++.+- .++.+.. .+..-......+.|
T Consensus 27 ~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~G--pv~~sP~~l~~al~rEvi~~~p----- 99 (157)
T PF08235_consen 27 WTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDG--PVLLSPDSLFSALHREVISKDP----- 99 (157)
T ss_pred hhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCC--CEEECCcchhhhhhccccccCh-----
Confidence 357999999999999999999999987543 44455554 33221 2333321 11000000001111
Q ss_pred CCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 142 SHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 142 ~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
..-|...|+.+...+......-...+|++.+|+.+-.++|.
T Consensus 100 ---------~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGi 140 (157)
T PF08235_consen 100 ---------EEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGI 140 (157)
T ss_pred ---------HHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCC
Confidence 23388999988877542222345569999999977665554
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=98.15 E-value=3.1e-05 Score=65.74 Aligned_cols=50 Identities=16% Similarity=0.173 Sum_probs=37.6
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHH---HHHHHHHcCCcCCcceEe
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANLFF---IETILEHLGIRDCFSEIN 118 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~---i~~~l~~~gl~~~fd~i~ 118 (275)
...++.|++.++.+.+++.|++++++||..... ...-|++.|+..+ +.++
T Consensus 142 ~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~-~~Li 194 (275)
T TIGR01680 142 GEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW-EKLI 194 (275)
T ss_pred ccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc-ceee
Confidence 357789999999999999999999999987543 3344555677543 4443
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=98.14 E-value=1.1e-05 Score=61.07 Aligned_cols=46 Identities=26% Similarity=0.326 Sum_probs=35.5
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHH---------------HHHHHHHHcCCcCCcceEe
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLF---------------FIETILEHLGIRDCFSEIN 118 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~---------------~i~~~l~~~gl~~~fd~i~ 118 (275)
.+.+++.+.|+.|+++|+.++++|+.+.. .+...|++.++. +|.++
T Consensus 24 ~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ip--Yd~l~ 84 (126)
T TIGR01689 24 APILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVP--YDEIY 84 (126)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCC--CceEE
Confidence 46788889999999999999999998654 445667777774 46665
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=98.13 E-value=3.2e-05 Score=75.80 Aligned_cols=73 Identities=18% Similarity=0.166 Sum_probs=49.6
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHH
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEEL 227 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el 227 (275)
.|.+..|..+++.++... +++.++++||+.||..+-..++...+.++-++. + ..| ....++..|+
T Consensus 652 ~p~~vnKG~al~~ll~~~---~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~---------~--s~A-~~~l~~~~eV 716 (726)
T PRK14501 652 RPAGVNKGRAVRRLLEAG---PYDFVLAIGDDTTDEDMFRALPETAITVKVGPG---------E--SRA-RYRLPSQREV 716 (726)
T ss_pred EECCCCHHHHHHHHHhcC---CCCEEEEECCCCChHHHHHhcccCceEEEECCC---------C--Ccc-eEeCCCHHHH
Confidence 367788999999998732 357999999999999887655433444433321 0 122 3356888888
Q ss_pred HHHHHHHH
Q 044553 228 EQILLHLV 235 (275)
Q Consensus 228 ~~~l~~~~ 235 (275)
...|+.+.
T Consensus 717 ~~~L~~l~ 724 (726)
T PRK14501 717 RELLRRLL 724 (726)
T ss_pred HHHHHHHh
Confidence 88887654
|
|
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.07 E-value=4.6e-05 Score=62.94 Aligned_cols=122 Identities=17% Similarity=0.191 Sum_probs=76.1
Q ss_pred ceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHH--hcCCCCCCHHHHH
Q 044553 3 GIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVL--KRIPIHPRVVPAI 80 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~pg~~e~L 80 (275)
+++|+.|+|.|++|..+..-..-. ...+.+.+.+..++ ....+.||+.||+
T Consensus 79 ~~aVvlDlDETvLdNs~Yqgy~v~---------------------------nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl 131 (274)
T COG2503 79 KKAVVLDLDETVLDNSAYQGYQVL---------------------------NNKGFTPETWDKWVQAKKSKAVPGAVEFL 131 (274)
T ss_pred CceEEEecchHhhcCccccchhhh---------------------------cCCCCCccchHHHHhhcccccCccHHHHH
Confidence 569999999999999763211110 01122222222222 3477899999999
Q ss_pred HHHHHcCCcEEEEeCCCHHH----HHHHHHHcCCcCCcc-eEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchH
Q 044553 81 KSAHALGCELRIVSDANLFF----IETILEHLGIRDCFS-EINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKG 155 (275)
Q Consensus 81 ~~L~~~g~~~~IvS~~~~~~----i~~~l~~~gl~~~fd-~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~ 155 (275)
.+..++|..++.+||..... ...-|.+.|+...-. +++ .|-. ...|.
T Consensus 132 ~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~l-------------lkk~---------------~k~Ke 183 (274)
T COG2503 132 NYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLL-------------LKKD---------------KKSKE 183 (274)
T ss_pred HHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceE-------------EeeC---------------CCcHH
Confidence 99999999999999987665 333455667754321 121 1100 12255
Q ss_pred HHHHHHHHhhhcCCCCeEEEEcCCCCCcc
Q 044553 156 VVIERIQASLSKEGNKKIIYLGDGSGDYC 184 (275)
Q Consensus 156 ~~l~~~~~~~~~~~~~~~i~vGDs~~Di~ 184 (275)
...+..... ..-+++|||...|+.
T Consensus 184 ~R~~~v~k~-----~~iVm~vGDNl~DF~ 207 (274)
T COG2503 184 VRRQAVEKD-----YKIVMLVGDNLDDFG 207 (274)
T ss_pred HHHHHHhhc-----cceeeEecCchhhhc
Confidence 555555443 467889999999984
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=98.06 E-value=1.5e-05 Score=67.77 Aligned_cols=56 Identities=20% Similarity=0.355 Sum_probs=44.3
Q ss_pred CCceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHHH
Q 044553 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAI 80 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L 80 (275)
|.+|+|+||+||||++++. .+.|...++|
T Consensus 3 ~~~klia~DlDGTLL~~~~---------------------------------------------------~is~~~~~ai 31 (247)
T PTZ00174 3 MKKTILLFDVDGTLTKPRN---------------------------------------------------PITQEMKDTL 31 (247)
T ss_pred CCCeEEEEECcCCCcCCCC---------------------------------------------------CCCHHHHHHH
Confidence 6689999999999998742 1234456888
Q ss_pred HHHHHcCCcEEEEeCCCHHHHHHHHHH
Q 044553 81 KSAHALGCELRIVSDANLFFIETILEH 107 (275)
Q Consensus 81 ~~L~~~g~~~~IvS~~~~~~i~~~l~~ 107 (275)
+.++++|+.++++|+.+...+...++.
T Consensus 32 ~~l~~~Gi~~viaTGR~~~~i~~~l~~ 58 (247)
T PTZ00174 32 AKLKSKGFKIGVVGGSDYPKIKEQLGE 58 (247)
T ss_pred HHHHHCCCEEEEEcCCCHHHHHHHHhh
Confidence 999999999999999988777666653
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.00011 Score=65.96 Aligned_cols=78 Identities=24% Similarity=0.204 Sum_probs=50.1
Q ss_pred CCCchHHHHHHHHHhhhcCCCCe--EEEEcCCCCCcccccccCC--CCeEeecCCchhhHHHhhCCCceeEEEeeCCChH
Q 044553 150 PNMCKGVVIERIQASLSKEGNKK--IIYLGDGSGDYCPSLKLSE--GDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGE 225 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~--~i~vGDs~~Di~~a~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 225 (275)
.+..|..+++.++..++....+. .+||||..||..+-..+.. .++.+.-++. +....| ....++..
T Consensus 298 ~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~---------~~~t~A-~y~L~dp~ 367 (384)
T PLN02580 298 IDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSV---------PKESNA-FYSLRDPS 367 (384)
T ss_pred CCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecC---------CCCccc-eEEcCCHH
Confidence 37889999999999876543223 4899999999976643221 1233221110 011223 33689999
Q ss_pred HHHHHHHHHHHH
Q 044553 226 ELEQILLHLVNT 237 (275)
Q Consensus 226 el~~~l~~~~~~ 237 (275)
|+.++|+.+..-
T Consensus 368 eV~~~L~~L~~~ 379 (384)
T PLN02580 368 EVMEFLKSLVTW 379 (384)
T ss_pred HHHHHHHHHHHh
Confidence 999999988753
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.02 E-value=4.4e-05 Score=76.56 Aligned_cols=142 Identities=15% Similarity=0.111 Sum_probs=81.6
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcc----eEecCCCccCCCCceeecccCCCCCCCCCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFS----EINTNPGFVDEEGRLRIFPFHDFTKCSHGC 145 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd----~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~ 145 (275)
-+++|++.++|+.|++.|+++.++|+.....+..+.+.+|+...-. ..+++.....-+.....+-... ..-+
T Consensus 536 Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~----~~v~ 611 (917)
T TIGR01116 536 DPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRS----AVLF 611 (917)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhc----CeEE
Confidence 3689999999999999999999999999999999999999853211 1222111000000000000000 0000
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC-CchhhHHHhhCCCceeEEEeeCCCh
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK-NFPLWDLIIRNPMLIKAEIHEWTDG 224 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~ 224 (275)
..+ ....|.++++.+... .+.+.|+|||.||+.+.+. +++.++-+ +. +...+.... +..=++|
T Consensus 612 ar~-~P~~K~~iV~~lq~~-----g~~va~iGDG~ND~~alk~---AdVGia~g~g~---~~ak~aAD~----vl~dd~f 675 (917)
T TIGR01116 612 SRV-EPSHKSELVELLQEQ-----GEIVAMTGDGVNDAPALKK---ADIGIAMGSGT---EVAKEASDM----VLADDNF 675 (917)
T ss_pred Eec-CHHHHHHHHHHHHhc-----CCeEEEecCCcchHHHHHh---CCeeEECCCCc---HHHHHhcCe----EEccCCH
Confidence 000 112388888877643 2688899999999988855 44455432 32 333222221 1112458
Q ss_pred HHHHHHH
Q 044553 225 EELEQIL 231 (275)
Q Consensus 225 ~el~~~l 231 (275)
..|...+
T Consensus 676 ~~i~~~i 682 (917)
T TIGR01116 676 ATIVAAV 682 (917)
T ss_pred HHHHHHH
Confidence 8877766
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.00 E-value=1.9e-05 Score=65.79 Aligned_cols=36 Identities=14% Similarity=0.254 Sum_probs=33.7
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 76 VVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 76 ~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
..++|+.|+++|++++++||++...++.+++.+++.
T Consensus 21 ~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 21 AAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 568999999999999999999999999999999986
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.00 E-value=5.7e-05 Score=72.95 Aligned_cols=117 Identities=16% Similarity=0.236 Sum_probs=82.4
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCP 149 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~ 149 (275)
-++.|++..+++.|++.|++++++|+.....++.+.++.|+ +.|++. .+|..
T Consensus 722 D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi----~~V~ae-----------v~P~~------------- 773 (951)
T KOG0207|consen 722 DQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGI----DNVYAE-----------VLPEQ------------- 773 (951)
T ss_pred cccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCc----ceEEec-----------cCchh-------------
Confidence 47889999999999999999999999999999999999994 566652 24433
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHH
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQ 229 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~ 229 (275)
|.+.++++..+ ...+.||||+.||-.+... +++.++-... .+..-+-.+. ++.-++..++..
T Consensus 774 ----K~~~Ik~lq~~-----~~~VaMVGDGINDaPALA~---AdVGIaig~g--s~vAieaADI----VLmrn~L~~v~~ 835 (951)
T KOG0207|consen 774 ----KAEKIKEIQKN-----GGPVAMVGDGINDAPALAQ---ADVGIAIGAG--SDVAIEAADI----VLMRNDLRDVPF 835 (951)
T ss_pred ----hHHHHHHHHhc-----CCcEEEEeCCCCccHHHHh---hccceeeccc--cHHHHhhCCE----EEEccchhhhHH
Confidence 88999999875 2479999999999865432 4444432221 1333222211 333456666666
Q ss_pred HHH
Q 044553 230 ILL 232 (275)
Q Consensus 230 ~l~ 232 (275)
.+.
T Consensus 836 ai~ 838 (951)
T KOG0207|consen 836 AID 838 (951)
T ss_pred HHH
Confidence 665
|
|
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=98.00 E-value=5.4e-05 Score=64.43 Aligned_cols=106 Identities=21% Similarity=0.199 Sum_probs=68.1
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHH---HcCCcCCcceEecCCCccCCCCceeec--ccCCCCCCCCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILE---HLGIRDCFSEINTNPGFVDEEGRLRIF--PFHDFTKCSHG 144 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~---~~gl~~~fd~i~~~~~~~~~~g~~~~k--p~~~~~~~~~~ 144 (275)
-..-+.+.++++.|+.+|+++..+|.....+....++ ++|++ |+.-. +..++.+..- +........+.
T Consensus 80 ~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~--fs~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 152 (252)
T PF11019_consen 80 ELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGID--FSSSS-----FPEDGIISFPVFDSALSRAPSFY 152 (252)
T ss_pred EEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCC--ccccc-----cccCcceecccccCCCCCCceee
Confidence 3456889999999999999999999987666555544 46664 33221 1122222110 00000011122
Q ss_pred CCc-CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCc
Q 044553 145 CNL-CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDY 183 (275)
Q Consensus 145 ~~~-~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di 183 (275)
.++ +..+..|+.++..++...+.. |+.+|||.|+...+
T Consensus 153 ~GIlft~~~~KG~~L~~fL~~~~~~-pk~IIfIDD~~~nl 191 (252)
T PF11019_consen 153 DGILFTGGQDKGEVLKYFLDKINQS-PKKIIFIDDNKENL 191 (252)
T ss_pred cCeEEeCCCccHHHHHHHHHHcCCC-CCeEEEEeCCHHHH
Confidence 233 456788999999999998766 58999999997766
|
The function is not known. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.99 E-value=6.2e-05 Score=75.02 Aligned_cols=138 Identities=17% Similarity=0.181 Sum_probs=85.1
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCC-ceee-cccCCCCCCCCCCCcC
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEG-RLRI-FPFHDFTKCSHGCNLC 148 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g-~~~~-kp~~~~~~~~~~~~~~ 148 (275)
++.|++.+.++.|++.|+++.++|+.....+..+.+++|+.. +.++++......+. .+.. -+....+...
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~------ 586 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEELSDEELARELRKYHIFARL------ 586 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEEC------
Confidence 678999999999999999999999999999999999999962 13333322110000 0000 0000000000
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC-CchhhHHHhhCCCceeEEEeeCCChHHH
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK-NFPLWDLIIRNPMLIKAEIHEWTDGEEL 227 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~el 227 (275)
....|.++++.+..+ + ..+.|+|||.||..+-+. +++.++-+ |. +...+.... ++.=++|..+
T Consensus 587 -~Pe~K~~iV~~lq~~----G-~vVam~GDGvNDapALk~---AdVGIAmg~gt---dvAk~aADi----VLldd~~~~I 650 (867)
T TIGR01524 587 -TPMQKSRIIGLLKKA----G-HTVGFLGDGINDAPALRK---ADVGISVDTAA---DIAKEASDI----ILLEKSLMVL 650 (867)
T ss_pred -CHHHHHHHHHHHHhC----C-CEEEEECCCcccHHHHHh---CCEEEEeCCcc---HHHHHhCCE----EEecCChHHH
Confidence 112389999998764 2 578899999999987644 56666544 33 333332222 2223667777
Q ss_pred HHHHH
Q 044553 228 EQILL 232 (275)
Q Consensus 228 ~~~l~ 232 (275)
...++
T Consensus 651 ~~ai~ 655 (867)
T TIGR01524 651 EEGVI 655 (867)
T ss_pred HHHHH
Confidence 66655
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.99 E-value=2.6e-05 Score=65.37 Aligned_cols=47 Identities=26% Similarity=0.197 Sum_probs=38.6
Q ss_pred CCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCC
Q 044553 74 PRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPG 122 (275)
Q Consensus 74 pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~ 122 (275)
+++.++|+.|+++|++++++|+.+...+...++.+|+..+ .|..|..
T Consensus 18 ~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~--~I~~NGa 64 (225)
T TIGR02461 18 GPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEPP--FIVENGG 64 (225)
T ss_pred hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCc--EEEcCCc
Confidence 4577999999999999999999999999999999998643 3444443
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.98 E-value=2.4e-05 Score=74.05 Aligned_cols=39 Identities=18% Similarity=0.182 Sum_probs=34.4
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 73 HPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
.+...+.|+.|+++|+.++|+|+.+...+...++.+++.
T Consensus 327 s~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~ 365 (580)
T PLN02887 327 SETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLA 365 (580)
T ss_pred CHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcc
Confidence 355668999999999999999999999999999998875
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=97.97 E-value=5.3e-05 Score=75.67 Aligned_cols=139 Identities=16% Similarity=0.196 Sum_probs=85.3
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCC-cee-ecccCCCCCCCCCCCc
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEG-RLR-IFPFHDFTKCSHGCNL 147 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g-~~~-~kp~~~~~~~~~~~~~ 147 (275)
-++.|++.+.++.|++.|+++.++|+.....+..+.+++|+.. +.++++.....-++ .+. .-+....+...
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~--~~v~~G~el~~l~~~el~~~~~~~~VfAr~----- 621 (902)
T PRK10517 549 DPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA--GEVLIGSDIETLSDDELANLAERTTLFARL----- 621 (902)
T ss_pred CcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc--cCceeHHHHHhCCHHHHHHHHhhCcEEEEc-----
Confidence 3678999999999999999999999999999999999999952 23444322110000 000 00000000000
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC-CchhhHHHhhCCCceeEEEeeCCChHH
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK-NFPLWDLIIRNPMLIKAEIHEWTDGEE 226 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~e 226 (275)
....|.++++.+..+ + ..+.|+|||.||..+-++ +++.++-+ |. +...+.... ++.=++|..
T Consensus 622 --sPe~K~~IV~~Lq~~----G-~vVam~GDGvNDaPALk~---ADVGIAmg~gt---dvAkeaADi----VLldd~~~~ 684 (902)
T PRK10517 622 --TPMHKERIVTLLKRE----G-HVVGFMGDGINDAPALRA---ADIGISVDGAV---DIAREAADI----ILLEKSLMV 684 (902)
T ss_pred --CHHHHHHHHHHHHHC----C-CEEEEECCCcchHHHHHh---CCEEEEeCCcC---HHHHHhCCE----EEecCChHH
Confidence 012389999998864 2 578899999999977643 56666644 22 333332222 222366777
Q ss_pred HHHHHH
Q 044553 227 LEQILL 232 (275)
Q Consensus 227 l~~~l~ 232 (275)
|...++
T Consensus 685 I~~ai~ 690 (902)
T PRK10517 685 LEEGVI 690 (902)
T ss_pred HHHHHH
Confidence 665554
|
|
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.97 E-value=9.1e-05 Score=58.32 Aligned_cols=97 Identities=14% Similarity=0.048 Sum_probs=61.3
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHH---H-HHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCc
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLFFIETI---L-EHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNL 147 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~---l-~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~ 147 (275)
|-+-++++|....++|-.++.+|+.+.--++.+ | +.+.+......+++++ ||.|.-
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gd-----------k~k~~q--------- 174 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGD-----------KPKPGQ--------- 174 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccC-----------CCCccc---------
Confidence 345577889999999999999999765433332 2 3345544433444433 232210
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCc
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNF 201 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~ 201 (275)
..|.. ++.. ..--|++|||.+||-+|+.+|..++-+-|...
T Consensus 175 ----y~Kt~----~i~~-----~~~~IhYGDSD~Di~AAkeaG~RgIRilRAaN 215 (237)
T COG3700 175 ----YTKTQ----WIQD-----KNIRIHYGDSDNDITAAKEAGARGIRILRAAN 215 (237)
T ss_pred ----ccccH----HHHh-----cCceEEecCCchhhhHHHhcCccceeEEecCC
Confidence 11233 2222 13568999999999999999999888877543
|
|
| >KOG3128 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.96 E-value=2e-05 Score=65.28 Aligned_cols=121 Identities=19% Similarity=0.144 Sum_probs=81.7
Q ss_pred CCCCHHHHHHHHhc--CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceee-
Q 044553 56 QGKTIEDIVEVLKR--IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRI- 132 (275)
Q Consensus 56 ~~~~~~~~~~~~~~--~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~- 132 (275)
.+.+...+.+.+++ +.+.+|..++++.|+++++|+.|.|.|....++.++++...-..+-.++|+-..++.+|...+
T Consensus 121 ~~f~k~~I~~~Va~s~i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l~gF 200 (298)
T KOG3128|consen 121 GGFSKNAIDDIVAESNIALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCGF 200 (298)
T ss_pred CCcCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCccHHhhhhhhhhcccchhhhh
Confidence 35566677766654 678899999999999999999999999999999998875333336778888887877776432
Q ss_pred -cccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhh-cCCCCeEEEEcCCCCCcccccc
Q 044553 133 -FPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLS-KEGNKKIIYLGDGSGDYCPSLK 188 (275)
Q Consensus 133 -kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~-~~~~~~~i~vGDs~~Di~~a~~ 188 (275)
+|....+.+. ..+++.-...+. ..+...+++.|||..|+.+|..
T Consensus 201 ~~~Lihtfnkn------------~~v~~~~s~yf~~~~~~~nVillGdsigdl~ma~g 246 (298)
T KOG3128|consen 201 SQPLIHTFNKN------------SSVLQNESEYFHQLAGRVNVILLGDSIGDLHMADG 246 (298)
T ss_pred hHHHHHHHccc------------hHHHHhhhHHHhhccCCceEEEeccccccchhhcC
Confidence 2222211110 122222222221 2235799999999999988743
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=4.5e-05 Score=76.18 Aligned_cols=138 Identities=18% Similarity=0.199 Sum_probs=85.0
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCC-ceee-cccCCCCCCCCCCCcC
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEG-RLRI-FPFHDFTKCSHGCNLC 148 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g-~~~~-kp~~~~~~~~~~~~~~ 148 (275)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.. +.++++.....-+. .+.. -+....+...
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~~~~el~~~v~~~~VfAr~------ 621 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAMDDAALAREVEERTVFAKL------ 621 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhCCHHHHHHHhhhCCEEEEe------
Confidence 688999999999999999999999999999999999999952 23333322110000 0000 0000000000
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC-CchhhHHHhhCCCceeEEEeeCCChHHH
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK-NFPLWDLIIRNPMLIKAEIHEWTDGEEL 227 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~el 227 (275)
....|.++++.+..+ + ..+.|+|||.||..+-+. +++.++-+ |. +...+.... ++.=++|..|
T Consensus 622 -sPe~K~~iV~~Lq~~----G-~vVamtGDGvNDaPALk~---ADVGIAmg~gt---dvAkeaADi----VLldd~f~~I 685 (903)
T PRK15122 622 -TPLQKSRVLKALQAN----G-HTVGFLGDGINDAPALRD---ADVGISVDSGA---DIAKESADI----ILLEKSLMVL 685 (903)
T ss_pred -CHHHHHHHHHHHHhC----C-CEEEEECCCchhHHHHHh---CCEEEEeCccc---HHHHHhcCE----EEecCChHHH
Confidence 012389999998864 3 578999999999977643 56666543 33 333332222 2222667777
Q ss_pred HHHHH
Q 044553 228 EQILL 232 (275)
Q Consensus 228 ~~~l~ 232 (275)
...++
T Consensus 686 v~ai~ 690 (903)
T PRK15122 686 EEGVI 690 (903)
T ss_pred HHHHH
Confidence 66655
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.94 E-value=3.8e-05 Score=66.19 Aligned_cols=38 Identities=11% Similarity=0.155 Sum_probs=34.3
Q ss_pred CCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 74 PRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 74 pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
+...+.|+.|+++|++++++|+.+...+..+++.+|++
T Consensus 27 ~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 27 QPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 44668899999999999999999999999999999985
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=97.94 E-value=6.6e-05 Score=73.74 Aligned_cols=137 Identities=20% Similarity=0.174 Sum_probs=82.6
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCc-------ee-ecccCCCCCCC
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGR-------LR-IFPFHDFTKCS 142 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~-------~~-~kp~~~~~~~~ 142 (275)
++.|++.++++.|++.|+++.++|+.....++.+.+++|+... +++.+.....+.. +. .-.....+...
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~ 518 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTN---IYTADVLLKGDNRDDLPSGELGEMVEDADGFAEV 518 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC---CcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEec
Confidence 6889999999999999999999999999999999999999642 2222211000000 00 00000000000
Q ss_pred CCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC-CchhhHHHhhCCCceeEEEeeC
Q 044553 143 HGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK-NFPLWDLIIRNPMLIKAEIHEW 221 (275)
Q Consensus 143 ~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~ 221 (275)
....|.++++.+..+ + ..+.|+|||.||..+-+. +++.++-+ +. +...+.... ++.=
T Consensus 519 -------~Pe~K~~iV~~lq~~----G-~~VamvGDGvNDapAL~~---AdVGIAm~~gt---dvAkeaADi----vLl~ 576 (755)
T TIGR01647 519 -------FPEHKYEIVEILQKR----G-HLVGMTGDGVNDAPALKK---ADVGIAVAGAT---DAARSAADI----VLTE 576 (755)
T ss_pred -------CHHHHHHHHHHHHhc----C-CEEEEEcCCcccHHHHHh---CCeeEEecCCc---HHHHHhCCE----EEEc
Confidence 112389999998764 3 579999999999976644 55555533 32 333332222 2223
Q ss_pred CChHHHHHHHH
Q 044553 222 TDGEELEQILL 232 (275)
Q Consensus 222 ~~~~el~~~l~ 232 (275)
+++..+...++
T Consensus 577 d~l~~I~~ai~ 587 (755)
T TIGR01647 577 PGLSVIVDAIL 587 (755)
T ss_pred CChHHHHHHHH
Confidence 56666655554
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.00016 Score=59.16 Aligned_cols=105 Identities=10% Similarity=0.085 Sum_probs=68.8
Q ss_pred EEEEcCCcccCCccHHHHHHHhCC------------ChHHH--hhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhc-C
Q 044553 6 VIFDFDKTIIDCDSDNFVVDELGA------------TDLFN--QLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKR-I 70 (275)
Q Consensus 6 viFD~DGTL~d~~~~~~~~~~~g~------------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 70 (275)
++|||.|.+.-++....++..+=. +.... ....+..-...+.-+...+-.++.+.+.++++.+. .
T Consensus 3 fvtD~EGP~sl~D~A~E~~a~~~pngrrfF~~~SeyDD~la~E~rReGYeaG~TLkLivPFL~ahGVt~~dlrr~sE~sa 82 (315)
T COG4030 3 FVTDWEGPWSLTDFALELCAAVFPNGRRFFSNLSEYDDYLAYEVRREGYEAGYTLKLIVPFLAAHGVTNRDLRRISELSA 82 (315)
T ss_pred ccccCCCCCccchhHHHHHHHHcCCHHHHHHhhhhhhhHHHHHHhccCCCCCcchhhHHHHHHHhcCcHHHHHHHHHhhc
Confidence 789999999988754333322211 11111 11111111222333444444567777777777665 8
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
.+.||+.++++.|+++ .+-+|+|.+..++++++...+|+.
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~P 122 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVP 122 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCC
Confidence 8999999999999886 677788888999999999999984
|
|
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=97.94 E-value=5.2e-06 Score=57.01 Aligned_cols=69 Identities=13% Similarity=0.024 Sum_probs=47.1
Q ss_pred hHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHH
Q 044553 154 KGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEEL 227 (275)
Q Consensus 154 K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el 227 (275)
...+++.++..++.. +++++||||+ .+||.+|+++|+..+.+..+.+....+... ...+ ...++++.|+
T Consensus 6 ~p~~~~~a~~~~~~~-~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~-~~~p---d~vv~~l~e~ 75 (75)
T PF13242_consen 6 SPGMLEQALKRLGVD-PSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKA-EHKP---DYVVDDLKEA 75 (75)
T ss_dssp SHHHHHHHHHHHTSG-GGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHS-SSTT---SEEESSGGGH
T ss_pred cHHHHHHHHHHcCCC-HHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhcc-CCCC---CEEECCHHhC
Confidence 347788888887655 5899999999 999999999999777776654443333321 1112 1256777664
|
... |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00014 Score=69.81 Aligned_cols=140 Identities=17% Similarity=0.120 Sum_probs=87.9
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcc----eEecCCCccCC-C-Cce-eecccCCCCCCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFS----EINTNPGFVDE-E-GRL-RIFPFHDFTKCS 142 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd----~i~~~~~~~~~-~-g~~-~~kp~~~~~~~~ 142 (275)
-+|+|++.+.++.|++.|+++.++|+.....+..+.+++|+...-+ ..+++.. ++. + ... ..+...-.
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~e-fD~ls~~~~~~~~~~~~v---- 657 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSE-FDDLSDEELDDAVRRVLV---- 657 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhh-hhcCCHHHHHHHhhcceE----
Confidence 4789999999999999999999999999999999999999865433 2333222 110 0 000 00000000
Q ss_pred CCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEee--cCCchhhHHHhhCCCceeEEEee
Q 044553 143 HGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMP--RKNFPLWDLIIRNPMLIKAEIHE 220 (275)
Q Consensus 143 ~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~ 220 (275)
..+|.+ .-|.++++.+... -+-+-|-|||+||-.+.+. +++.++ ..|..+.+-. ... ++.
T Consensus 658 --FaR~~P-~HK~kIVeaLq~~-----geivAMTGDGVNDApALK~---AdIGIAMG~~GTdVaKeA---sDM----VL~ 719 (972)
T KOG0202|consen 658 --FARAEP-QHKLKIVEALQSR-----GEVVAMTGDGVNDAPALKK---ADIGIAMGISGTDVAKEA---SDM----VLA 719 (972)
T ss_pred --EEecCc-hhHHHHHHHHHhc-----CCEEEecCCCccchhhhhh---cccceeecCCccHhhHhh---hhc----EEe
Confidence 000111 2289999988765 2678899999999977654 444444 4455333322 112 344
Q ss_pred CCChHHHHHHHH
Q 044553 221 WTDGEELEQILL 232 (275)
Q Consensus 221 ~~~~~el~~~l~ 232 (275)
=++|+.+...++
T Consensus 720 DDnFstIvaAVE 731 (972)
T KOG0202|consen 720 DDNFSTIVAAVE 731 (972)
T ss_pred cCcHHHHHHHHH
Confidence 578888777665
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=97.91 E-value=3.8e-05 Score=65.52 Aligned_cols=40 Identities=18% Similarity=0.310 Sum_probs=35.0
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcC
Q 044553 73 HPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRD 112 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~ 112 (275)
.+...+.|++|+++|++++++|+.+...+...++.+++..
T Consensus 18 ~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~ 57 (256)
T TIGR00099 18 SPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDT 57 (256)
T ss_pred CHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCC
Confidence 4566789999999999999999999999999999988763
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.91 E-value=9.7e-05 Score=74.36 Aligned_cols=139 Identities=15% Similarity=0.147 Sum_probs=84.8
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCC-ceee-cccCCCCCCCCCCCcC
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEG-RLRI-FPFHDFTKCSHGCNLC 148 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g-~~~~-kp~~~~~~~~~~~~~~ 148 (275)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+..--..++++........ .+.. -+....+.. +
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar------~ 652 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLAR------S 652 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEE------C
Confidence 6889999999999999999999999999999999999999632223443322110000 0000 000000000 0
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC--CchhhHHHhhCCCceeEEEeeCCChHH
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK--NFPLWDLIIRNPMLIKAEIHEWTDGEE 226 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~e 226 (275)
....|.++++.+... + ..+.|+|||.||..+-++ +++.++-+ |. +...+.... +..=++|..
T Consensus 653 -sPe~K~~iV~~lq~~----g-~vVam~GDGvNDapALk~---AdVGIAmg~~gt---dvAk~aADi----vL~dd~f~~ 716 (941)
T TIGR01517 653 -SPLDKQLLVLMLKDM----G-EVVAVTGDGTNDAPALKL---ADVGFSMGISGT---EVAKEASDI----ILLDDNFAS 716 (941)
T ss_pred -CHHHHHHHHHHHHHC----C-CEEEEECCCCchHHHHHh---CCcceecCCCcc---HHHHHhCCE----EEecCCHHH
Confidence 112389999998764 2 479999999999987644 56665543 33 323222222 222256777
Q ss_pred HHHHH
Q 044553 227 LEQIL 231 (275)
Q Consensus 227 l~~~l 231 (275)
|...+
T Consensus 717 I~~~i 721 (941)
T TIGR01517 717 IVRAV 721 (941)
T ss_pred HHHHH
Confidence 77666
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=97.86 E-value=7.4e-05 Score=63.32 Aligned_cols=51 Identities=22% Similarity=0.287 Sum_probs=47.2
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCc
Q 044553 73 HPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGF 123 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~ 123 (275)
.|.+.+.|..|++.|..+++=|.|.++.+...++.+++..+||.|+|....
T Consensus 144 ~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~~ 194 (297)
T PF05152_consen 144 DPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGGNK 194 (297)
T ss_pred ChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCCcc
Confidence 578889999999999999999999999999999999999999999987654
|
|
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00024 Score=60.69 Aligned_cols=56 Identities=11% Similarity=0.049 Sum_probs=44.1
Q ss_pred CchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccccccCCCCeEeecCCchhhHHHh
Q 044553 152 MCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSLKLSEGDHVMPRKNFPLWDLII 208 (275)
Q Consensus 152 ~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~~~~~~~~~~~~~~~~~l~~ 208 (275)
++-..+++.++.++++. |++++||||+ .+||.-++.-|...+++-.+.....+...
T Consensus 224 KP~~~m~~~l~~~~~i~-psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~ 280 (306)
T KOG2882|consen 224 KPSTFMFEYLLEKFNID-PSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILE 280 (306)
T ss_pred CCCHHHHHHHHHHcCCC-cceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHh
Confidence 33458888889888887 6999999999 67998888878887777777766655553
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.82 E-value=3.5e-05 Score=65.52 Aligned_cols=38 Identities=16% Similarity=0.269 Sum_probs=31.6
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccc
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPS 186 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a 186 (275)
.|.+.+|..+++.++.+++.. +++++++|||.||+.+-
T Consensus 160 lP~~a~K~~Al~~L~~~~~~~-~~~vl~aGDSgND~~mL 197 (247)
T PF05116_consen 160 LPKGASKGAALRYLMERWGIP-PEQVLVAGDSGNDLEML 197 (247)
T ss_dssp EETT-SHHHHHHHHHHHHT---GGGEEEEESSGGGHHHH
T ss_pred ccCCCCHHHHHHHHHHHhCCC-HHHEEEEeCCCCcHHHH
Confidence 577888999999999999765 47999999999999887
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=97.80 E-value=7.3e-05 Score=60.99 Aligned_cols=88 Identities=18% Similarity=0.288 Sum_probs=46.7
Q ss_pred eE-EEEEcCCcccCCcc-H-HHHHHHhCCC--hHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHH------HHhcCCC
Q 044553 4 IV-VIFDFDKTIIDCDS-D-NFVVDELGAT--DLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVE------VLKRIPI 72 (275)
Q Consensus 4 ~~-viFD~DGTL~d~~~-~-~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 72 (275)
++ |.+|+||||+|..+ + ..+-+.++.. ....+......+... ... .....+.+.. ++..++|
T Consensus 2 ~i~I~iDiDgVLad~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~-----g~~--~~e~~~~~~~~~~~~~~f~~l~p 74 (191)
T PF06941_consen 2 KIRIAIDIDGVLADFNSAFIEWFNEEFGKNPELTPEDITGYWDWEKW-----GIT--EPEFYEKLWRFYEEPGFFSNLPP 74 (191)
T ss_dssp -EEEEEESBTTTB-HHHHHHHHHHHHTTTS----GGGGTSSSHHHHH-----HHH--STTHHHHHHHHHTSTTTTTT--B
T ss_pred CcEEEEECCCCCcccHHHHHHHHHHHcCCCCCCCHHHhhhhhHHHHh-----CCC--CHHHHHHHHHHHhChhhhcCCCc
Confidence 45 89999999999864 3 4445556665 222222221111111 000 0111122222 3456899
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeCCCH
Q 044553 73 HPRVVPAIKSAHALGCELRIVSDANL 98 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~~~~IvS~~~~ 98 (275)
.||+.++|+.|.+.|+.++++|+.+.
T Consensus 75 ~~gA~e~l~~L~~~g~~~~~Itar~~ 100 (191)
T PF06941_consen 75 IPGAVEALKKLRDKGHEIVIITARPP 100 (191)
T ss_dssp -TTHHHHHHHHHTSTTEEEEEEE-SS
T ss_pred cHHHHHHHHHHHHcCCcEEEEEecCc
Confidence 99999999999999988888887654
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00019 Score=71.90 Aligned_cols=143 Identities=13% Similarity=0.088 Sum_probs=87.7
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcc--eEecCCCccCCCCceeecccCCCCCCCCCCCc
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFS--EINTNPGFVDEEGRLRIFPFHDFTKCSHGCNL 147 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd--~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~ 147 (275)
-+|.|+++++++.|++.|+++.++|+.....+..+.+++|+..--. .++++...-... +.++...-..+..
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~-------~~el~~~~~~~~V 618 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALS-------DEELAELVEELSV 618 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcC-------HHHHHHHhhhCcE
Confidence 5789999999999999999999999999999999999999865432 244433211000 0000000000111
Q ss_pred -CC-CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChH
Q 044553 148 -CP-PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGE 225 (275)
Q Consensus 148 -~~-~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 225 (275)
|. ...-|.++++.+.+. + .-+.|+|||.||..+-+. +++.++-++.+. +-..+.... +..-+++.
T Consensus 619 fARvsP~qK~~IV~~lq~~----g-~vVamtGDGvNDapALk~---ADVGIamg~~Gt-daak~Aadi----vl~dd~~~ 685 (917)
T COG0474 619 FARVSPEQKARIVEALQKS----G-HVVAMTGDGVNDAPALKA---ADVGIAMGGEGT-DAAKEAADI----VLLDDNFA 685 (917)
T ss_pred EEEcCHHHHHHHHHHHHhC----C-CEEEEeCCCchhHHHHHh---cCccEEecccHH-HHHHhhcce----EeecCcHH
Confidence 11 112289999998875 3 588899999999987744 566654443211 111111111 34557777
Q ss_pred HHHHHHH
Q 044553 226 ELEQILL 232 (275)
Q Consensus 226 el~~~l~ 232 (275)
.+...++
T Consensus 686 ~i~~av~ 692 (917)
T COG0474 686 TIVLAVV 692 (917)
T ss_pred HHHHHHH
Confidence 7766654
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00012 Score=69.68 Aligned_cols=38 Identities=18% Similarity=0.174 Sum_probs=33.7
Q ss_pred CHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcC
Q 044553 75 RVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRD 112 (275)
Q Consensus 75 g~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~ 112 (275)
...+.|+.|+++|++++++|+.+...+..+++.+++..
T Consensus 437 ~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~ 474 (694)
T PRK14502 437 TALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKD 474 (694)
T ss_pred HHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCC
Confidence 34578999999999999999999999999999998754
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00027 Score=71.75 Aligned_cols=140 Identities=14% Similarity=0.091 Sum_probs=83.3
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCc----------ceEecCCCccCCCCceeecccCCCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCF----------SEINTNPGFVDEEGRLRIFPFHDFT 139 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~f----------d~i~~~~~~~~~~g~~~~kp~~~~~ 139 (275)
-++.|++.++++.|++.|+++.++|+.....+..+.+.+|+..-. ..++++.....-+ ..++.
T Consensus 645 Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~-------~~~l~ 717 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALS-------DEEVD 717 (1053)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcC-------HHHHH
Confidence 368899999999999999999999999999999999999995320 1233222110000 00000
Q ss_pred CCCCCCCc-CC-CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeec--CCchhhHHHhhCCCcee
Q 044553 140 KCSHGCNL-CP-PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPR--KNFPLWDLIIRNPMLIK 215 (275)
Q Consensus 140 ~~~~~~~~-~~-~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~ 215 (275)
.....+.. |. ....|.++++.+... + ..+.|+|||.||..+-+. +++.++- .|. +...+....
T Consensus 718 ~~~~~~~V~ar~sP~~K~~iV~~lq~~----g-~~Vam~GDGvNDapaLk~---AdVGIAmg~~gt---~vak~aADi-- 784 (1053)
T TIGR01523 718 DLKALCLVIARCAPQTKVKMIEALHRR----K-AFCAMTGDGVNDSPSLKM---ANVGIAMGINGS---DVAKDASDI-- 784 (1053)
T ss_pred HHhhcCeEEEecCHHHHHHHHHHHHhc----C-CeeEEeCCCcchHHHHHh---CCccEecCCCcc---HHHHHhcCE--
Confidence 00000000 00 113388999988764 2 578899999999987643 5555553 343 222222221
Q ss_pred EEEeeCCChHHHHHHH
Q 044553 216 AEIHEWTDGEELEQIL 231 (275)
Q Consensus 216 ~~~~~~~~~~el~~~l 231 (275)
+..=++|..|...+
T Consensus 785 --vl~dd~f~~I~~~i 798 (1053)
T TIGR01523 785 --VLSDDNFASILNAI 798 (1053)
T ss_pred --EEecCCHHHHHHHH
Confidence 22225577776655
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=97.70 E-value=7.5e-05 Score=58.96 Aligned_cols=52 Identities=17% Similarity=0.197 Sum_probs=42.0
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCC-cCCcceEecCCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGI-RDCFSEINTNPG 122 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl-~~~fd~i~~~~~ 122 (275)
+.+.||+.++|++|.+. +.++|.|++...++..+++.+.- ..+|+.+++.+.
T Consensus 35 v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ldp~~~~~~~~~~r~~ 87 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALDPNGKLFSRRLYRDD 87 (159)
T ss_dssp EEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHTTTTSSEEEEEEGGG
T ss_pred EeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhhhhcccccccccccc
Confidence 56789999999999766 99999999999999999999987 467888876553
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00024 Score=64.91 Aligned_cols=49 Identities=16% Similarity=0.123 Sum_probs=38.1
Q ss_pred cCCCCCchHHHHHHHHHhh---hcCCCCeEEEEcCCCCCcccccccCCCCeEe
Q 044553 147 LCPPNMCKGVVIERIQASL---SKEGNKKIIYLGDGSGDYCPSLKLSEGDHVM 196 (275)
Q Consensus 147 ~~~~~~~K~~~l~~~~~~~---~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~ 196 (275)
+.+.+.+|..+++.++..+ ++. +++++++|||.||+.+-..++..++++
T Consensus 169 I~p~g~sKg~Al~~L~~~~~~~gi~-~~~~iafGDs~NDleMl~~ag~~gvam 220 (413)
T PLN02382 169 VLPQGAGKGQALAYLLKKLKAEGKA-PVNTLVCGDSGNDAELFSVPDVYGVMV 220 (413)
T ss_pred EEeCCCCHHHHHHHHHHHhhhcCCC-hhcEEEEeCCHHHHHHHhcCCCCEEEE
Confidence 3577888999999999998 554 589999999999998875544234444
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.0011 Score=54.24 Aligned_cols=36 Identities=14% Similarity=0.230 Sum_probs=31.4
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 76 VVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 76 ~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
+.+++.+|++.|++++.+|+.+...+...-+.+|+.
T Consensus 28 A~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 28 AAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred cchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 447888999999999999999998888888888886
|
|
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.0016 Score=59.96 Aligned_cols=51 Identities=18% Similarity=0.107 Sum_probs=40.5
Q ss_pred HHHHHHHcCCcEEEEeCCCHHHHHHHHHH-cCCcCCcceEecCCCccCCCCceeecc
Q 044553 79 AIKSAHALGCELRIVSDANLFFIETILEH-LGIRDCFSEINTNPGFVDEEGRLRIFP 134 (275)
Q Consensus 79 ~L~~L~~~g~~~~IvS~~~~~~i~~~l~~-~gl~~~fd~i~~~~~~~~~~g~~~~kp 134 (275)
.++..++.| +++|+|..++-+++..++. +|+ |.|++.+..+...|...+.-
T Consensus 101 ~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~----D~VvGTEL~v~~~G~~TG~~ 152 (498)
T PLN02499 101 AWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRA----DEVIGSELVVNRFGFATGFI 152 (498)
T ss_pred HHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCC----ceEEeeeEEEeeccEEEEEE
Confidence 666777788 9999999999999999998 786 47778777665447777753
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00022 Score=60.24 Aligned_cols=49 Identities=18% Similarity=0.143 Sum_probs=36.3
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCC---HHHHHHHHHH-cCCcCCcceEecC
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDAN---LFFIETILEH-LGIRDCFSEINTN 120 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~---~~~i~~~l~~-~gl~~~fd~i~~~ 120 (275)
++|++.++|+.++++|+++.++||++ ...+...+.. +|+.--.+.++++
T Consensus 15 ~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits 67 (236)
T TIGR01460 15 PIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITS 67 (236)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeH
Confidence 37899999999999999999999764 3444445555 7776555666654
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00089 Score=67.89 Aligned_cols=41 Identities=20% Similarity=0.297 Sum_probs=38.8
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
++.|++.++++.|+++|+++.++|+.....+..+.+.+|+-
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~ 608 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGII 608 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence 67899999999999999999999999999999999999984
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00015 Score=64.18 Aligned_cols=57 Identities=9% Similarity=-0.092 Sum_probs=37.7
Q ss_pred CCeEEEEcCCC-CCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHHH
Q 044553 170 NKKIIYLGDGS-GDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQIL 231 (275)
Q Consensus 170 ~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~l 231 (275)
+++++||||+. +||..|.++|+..+.+..+.+...+. .....+ ...++++.|+...|
T Consensus 263 ~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~--~~~~~p---~~vv~~l~e~~~~i 320 (321)
T TIGR01456 263 FHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDD--LKECKP---TLIVNDVFDAVTKI 320 (321)
T ss_pred hheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCC--CCCCCC---CEEECCHHHHHHHh
Confidence 36999999995 99999999998877775543432221 001112 33678888887654
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0031 Score=51.15 Aligned_cols=75 Identities=11% Similarity=0.110 Sum_probs=47.7
Q ss_pred hHHHHHHHHHhhhcCCCCeEEEEcCCC-CCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHHHH
Q 044553 154 KGVVIERIQASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILL 232 (275)
Q Consensus 154 K~~~l~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~l~ 232 (275)
....++..+...+.. |++++||||-. .|+..|.+.|+.++.+.++-|...+-. .+. +++ ....++|.|...+|-
T Consensus 183 ~~~fFe~al~~~gv~-p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~--k~~-~~p-~~~~d~f~~AVd~I~ 257 (262)
T KOG3040|consen 183 SPFFFESALQALGVD-PEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEE--KPP-VPP-DLTADNFADAVDLII 257 (262)
T ss_pred CHHHHHHHHHhcCCC-hHHheEEccccccchhhHhhhcceeEEeeccccCCcccc--cCC-CCc-chhhhhHHHHHHHHH
Confidence 345666777766644 68999999994 588888888998888876655332211 111 112 335577777666654
Q ss_pred H
Q 044553 233 H 233 (275)
Q Consensus 233 ~ 233 (275)
+
T Consensus 258 q 258 (262)
T KOG3040|consen 258 Q 258 (262)
T ss_pred h
Confidence 3
|
|
| >PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3 | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00021 Score=65.50 Aligned_cols=126 Identities=19% Similarity=0.292 Sum_probs=65.8
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHc-C--------CcCCcceEecCCCc--cCCCCc--eeecccC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHL-G--------IRDCFSEINTNPGF--VDEEGR--LRIFPFH 136 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~-g--------l~~~fd~i~~~~~~--~~~~g~--~~~kp~~ 136 (275)
+..-|.+..+|+.|++.|-++.++||+.-.++..+++.+ | +.++||.|++.... |-.++. ....+..
T Consensus 182 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~ 261 (448)
T PF05761_consen 182 IHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTET 261 (448)
T ss_dssp EE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTT
T ss_pred ccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCC
Confidence 345689999999999999999999999999999999974 3 46789988875431 101110 0000000
Q ss_pred C---CCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCccccc-ccCCCCeEeec
Q 044553 137 D---FTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSL-KLSEGDHVMPR 198 (275)
Q Consensus 137 ~---~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~-~~~~~~~~~~~ 198 (275)
. ......... +......--+..+..-.+..+ .+++||||+ ..||..++ ..||..++++.
T Consensus 262 g~l~~~~~~~~l~--~g~vY~gGn~~~l~~ll~~~g-~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~ 325 (448)
T PF05761_consen 262 GKLKWGKYVGPLE--KGKVYSGGNWDQLHKLLGWRG-KEVLYFGDHIYGDILKSKKRHGWRTAAIIP 325 (448)
T ss_dssp SSEECS---SS----TC-EEEE--HHHHHHHCT--G-GGEEEEESSTTTTHHHHHHHH-SEEEEE-T
T ss_pred Ccccccccccccc--CCCEeecCCHHHHHHHHccCC-CeEEEECCchhhhhhhhccccceEEEEEeh
Confidence 0 000000000 001111122233333334444 699999999 68995554 44887777764
|
1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A .... |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.00098 Score=55.47 Aligned_cols=40 Identities=23% Similarity=0.279 Sum_probs=33.4
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccC
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLS 190 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~ 190 (275)
.+..|...++.++..+++. ++++++|||+.||+.+...+|
T Consensus 176 ~~~~Kg~al~~l~~~lgi~-~~~vi~~GD~~NDi~ml~~ag 215 (221)
T TIGR02463 176 ASSSKGKAANWLKATYNQP-DVKTLGLGDGPNDLPLLEVAD 215 (221)
T ss_pred CCCCHHHHHHHHHHHhCCC-CCcEEEECCCHHHHHHHHhCC
Confidence 3455999999999998876 589999999999999885544
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0014 Score=66.99 Aligned_cols=42 Identities=17% Similarity=0.238 Sum_probs=39.6
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
-++.|++.++++.|++.|+++.++|+.....+..+.+..|+-
T Consensus 655 d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii 696 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIV 696 (1054)
T ss_pred cCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence 368999999999999999999999999999999999999984
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0022 Score=55.29 Aligned_cols=38 Identities=18% Similarity=0.205 Sum_probs=32.3
Q ss_pred chHHHHHHHHHhhhcCCC-CeEEEEcCCCCCcccccccCC
Q 044553 153 CKGVVIERIQASLSKEGN-KKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 153 ~K~~~l~~~~~~~~~~~~-~~~i~vGDs~~Di~~a~~~~~ 191 (275)
.|...++++++.++.. + +++++|||+.||+.++..+|.
T Consensus 190 ~Kg~al~~l~~~~~i~-~~~~v~~~GDs~NDi~m~~~ag~ 228 (273)
T PRK00192 190 DKGKAVRWLKELYRRQ-DGVETIALGDSPNDLPMLEAADI 228 (273)
T ss_pred CHHHHHHHHHHHHhcc-CCceEEEEcCChhhHHHHHhCCe
Confidence 5899999999888765 6 899999999999999865443
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0036 Score=53.13 Aligned_cols=34 Identities=18% Similarity=0.295 Sum_probs=24.8
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHH
Q 044553 73 HPRVVPAIKSAHALGCELRIVSDANLFFIETILEH 107 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~ 107 (275)
.|.+.++|++|+++ ++++++|+.....+...+..
T Consensus 26 ~~~~~~ai~~l~~~-i~fviaTGR~~~~~~~~~~~ 59 (245)
T PLN02423 26 TPEMLEFMKELRKV-VTVGVVGGSDLSKISEQLGK 59 (245)
T ss_pred CHHHHHHHHHHHhC-CEEEEECCcCHHHHHHHhcc
Confidence 35666889999976 99999999866555544443
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0013 Score=55.31 Aligned_cols=41 Identities=20% Similarity=0.215 Sum_probs=34.8
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCccccccc
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKL 189 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~ 189 (275)
.+.+.+|..+++.++..++.. +++++++||+.||+.+...+
T Consensus 154 ~~~~~~K~~al~~l~~~~g~~-~~~~i~~GD~~nD~~ml~~~ 194 (236)
T TIGR02471 154 LPLRASKGLALRYLSYRWGLP-LEQILVAGDSGNDEEMLRGL 194 (236)
T ss_pred eeCCCChHHHHHHHHHHhCCC-HHHEEEEcCCccHHHHHcCC
Confidence 467788999999999998765 47999999999999988553
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0028 Score=51.72 Aligned_cols=41 Identities=22% Similarity=0.300 Sum_probs=36.7
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
....|++.+||+.+.+ .|.++|-|+++..++..++..+++.
T Consensus 44 ~~kRP~l~eFL~~~~~-~feIvVwTAa~~~ya~~~l~~l~~~ 84 (195)
T TIGR02245 44 ELMRPYLHEFLTSAYE-DYDIVIWSATSMKWIEIKMTELGVL 84 (195)
T ss_pred EEeCCCHHHHHHHHHh-CCEEEEEecCCHHHHHHHHHHhccc
Confidence 3457999999999998 5999999999999999999998764
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0044 Score=58.20 Aligned_cols=79 Identities=24% Similarity=0.383 Sum_probs=63.5
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCP 149 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~ 149 (275)
-++.|++.+++++|++.|+++.++|+.....+..+.+.+|+ ++ ...|
T Consensus 346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-------~~-----------~~~p--------------- 392 (499)
T TIGR01494 346 DPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-------FA-----------RVTP--------------- 392 (499)
T ss_pred CCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-------ee-----------ccCH---------------
Confidence 47899999999999999999999999999999999999986 11 1122
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccc
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLK 188 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~ 188 (275)
..|.+.++.+..+ + ..+.|+||+.||..+-..
T Consensus 393 --~~K~~~v~~l~~~----g-~~v~~vGDg~nD~~al~~ 424 (499)
T TIGR01494 393 --EEKAALVEALQKK----G-RVVAMTGDGVNDAPALKK 424 (499)
T ss_pred --HHHHHHHHHHHHC----C-CEEEEECCChhhHHHHHh
Confidence 1278888887643 2 589999999999976643
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0047 Score=55.13 Aligned_cols=77 Identities=25% Similarity=0.220 Sum_probs=47.9
Q ss_pred CCchHHHHHHHHHhhhcCC--CCeEEEEcCCCCCcccccccCC--CCeEeecCCchhhHHHhhCCCceeEEEeeCCChHH
Q 044553 151 NMCKGVVIERIQASLSKEG--NKKIIYLGDGSGDYCPSLKLSE--GDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEE 226 (275)
Q Consensus 151 ~~~K~~~l~~~~~~~~~~~--~~~~i~vGDs~~Di~~a~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e 226 (275)
+..|+.+++.++..++..+ ....+|+||-.+|-.+-+.+.. .++.+.-+.. +....| .+..++..|
T Consensus 281 ~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~---------~k~T~A-~y~L~dp~e 350 (366)
T PLN03017 281 EWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKF---------PKDTDA-SYSLQDPSE 350 (366)
T ss_pred CCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCC---------CCCCcc-eEeCCCHHH
Confidence 6689999999998765322 1358999999998755433321 1222211100 111223 346799999
Q ss_pred HHHHHHHHHHH
Q 044553 227 LEQILLHLVNT 237 (275)
Q Consensus 227 l~~~l~~~~~~ 237 (275)
+..+|+.+..-
T Consensus 351 V~~fL~~L~~~ 361 (366)
T PLN03017 351 VMDFLARLVEW 361 (366)
T ss_pred HHHHHHHHHHH
Confidence 99999988753
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.0046 Score=54.98 Aligned_cols=76 Identities=21% Similarity=0.150 Sum_probs=46.7
Q ss_pred CCchHHHHHHHHHhhhcCCC--CeEEEEcCCCCCcccccccCC--CCeEeecCCchhhHHHhhCCCceeEEEeeCCChHH
Q 044553 151 NMCKGVVIERIQASLSKEGN--KKIIYLGDGSGDYCPSLKLSE--GDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEE 226 (275)
Q Consensus 151 ~~~K~~~l~~~~~~~~~~~~--~~~i~vGDs~~Di~~a~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e 226 (275)
+..|..+++.++..++..+. .-.+|+||-.+|-.+-..+.. .++.+.-+. .+....| ....++..+
T Consensus 267 ~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~---------~~k~T~A-~y~L~dp~e 336 (354)
T PLN02151 267 KWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSK---------YAKETNA-SYSLQEPDE 336 (354)
T ss_pred CCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEecc---------CCCCCcc-eEeCCCHHH
Confidence 66899999999987653321 247999999888754432221 122211110 0111123 346899999
Q ss_pred HHHHHHHHHH
Q 044553 227 LEQILLHLVN 236 (275)
Q Consensus 227 l~~~l~~~~~ 236 (275)
+.++|+.+..
T Consensus 337 V~~~L~~L~~ 346 (354)
T PLN02151 337 VMEFLERLVE 346 (354)
T ss_pred HHHHHHHHHH
Confidence 9999998875
|
|
| >KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.042 Score=42.44 Aligned_cols=45 Identities=11% Similarity=0.013 Sum_probs=32.5
Q ss_pred hHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccccccCCCCeEeec
Q 044553 154 KGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSLKLSEGDHVMPR 198 (275)
Q Consensus 154 K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~~~~~~~~~~ 198 (275)
-.+.++++-..-....+++++||||. .+||.+|..+|.-+++.-+
T Consensus 123 t~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~ 168 (190)
T KOG2961|consen 123 TAEEVEYHFGNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEP 168 (190)
T ss_pred cHHHHHHHhCCcccCChhHeEEEccchhhhHhhhhhccceeEEecc
Confidence 45777776553333446899999999 6899999887776666543
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.0098 Score=54.64 Aligned_cols=149 Identities=17% Similarity=0.223 Sum_probs=94.2
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCC
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPP 150 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~ 150 (275)
.+-||++|-+++|++.|++.+.+|+.+.-.+..+.+..|+++| +. ..+|
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDdf---iA------------eatP---------------- 495 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDF---IA------------EATP---------------- 495 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchhh---hh------------cCCh----------------
Confidence 4679999999999999999999999999999999999999765 22 1233
Q ss_pred CCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeec-CCchhhHHHhhCCCceeEEEeeC-CChHHHH
Q 044553 151 NMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPR-KNFPLWDLIIRNPMLIKAEIHEW-TDGEELE 228 (275)
Q Consensus 151 ~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~-~~~~el~ 228 (275)
..|.+.+++...+ + .-+-|.||+.||-.+..+ +++.++- .|.... .+..+.. .. +++.-|.
T Consensus 496 -EdK~~~I~~eQ~~----g-rlVAMtGDGTNDAPALAq---AdVg~AMNsGTqAA---kEAaNMV-----DLDS~PTKli 558 (681)
T COG2216 496 -EDKLALIRQEQAE----G-RLVAMTGDGTNDAPALAQ---ADVGVAMNSGTQAA---KEAANMV-----DLDSNPTKLI 558 (681)
T ss_pred -HHHHHHHHHHHhc----C-cEEEEcCCCCCcchhhhh---cchhhhhccccHHH---HHhhccc-----ccCCCcccee
Confidence 1277877776654 3 467899999999866533 5555553 233211 1212222 22 4455555
Q ss_pred HHHHHHHHHhccCCCCCcccccCcccc----cccccchhhcccCcc
Q 044553 229 QILLHLVNTIGSTNNNNSAQLLSADCK----LQTISAAAHETLPQV 270 (275)
Q Consensus 229 ~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 270 (275)
+++. +...+-+| |.+..-.|+-|. |--|||..-...||.
T Consensus 559 evV~-IGKqlLiT--RGaLTTFSIANDvAKYFaIiPA~F~~~~P~l 601 (681)
T COG2216 559 EVVE-IGKQLLIT--RGALTTFSIANDVAKYFAIIPAMFAAAYPQL 601 (681)
T ss_pred hHhh-hhhhheee--cccceeeehhhHHHHHHHHHHHHHHhhcccc
Confidence 5443 11122221 222333555553 666888877777764
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.028 Score=48.62 Aligned_cols=48 Identities=10% Similarity=0.100 Sum_probs=36.6
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCC---HHHHHHHHHHcCCcCCcceEec
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDAN---LFFIETILEHLGIRDCFSEINT 119 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~---~~~i~~~l~~~gl~~~fd~i~~ 119 (275)
++||+.++|+.|+++|++++++||++ .......++++|+..-.+.|++
T Consensus 19 ~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~t 69 (279)
T TIGR01452 19 VVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFS 69 (279)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEec
Confidence 58999999999999999999999965 3344456777888644445553
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.016 Score=59.35 Aligned_cols=42 Identities=10% Similarity=0.029 Sum_probs=38.7
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
-++.||+.++++.|++.|+++.++|+.....+..+....|+-
T Consensus 630 D~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii 671 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLL 671 (1057)
T ss_pred hhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCC
Confidence 468899999999999999999999999999999999888874
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.0057 Score=54.12 Aligned_cols=15 Identities=20% Similarity=0.322 Sum_probs=13.5
Q ss_pred EEEEEcCCcccCCcc
Q 044553 5 VVIFDFDKTIIDCDS 19 (275)
Q Consensus 5 ~viFD~DGTL~d~~~ 19 (275)
+++||+||||+++..
T Consensus 2 ~~ifD~DGvL~~g~~ 16 (321)
T TIGR01456 2 GFAFDIDGVLFRGKK 16 (321)
T ss_pred EEEEeCcCceECCcc
Confidence 689999999999965
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.011 Score=58.91 Aligned_cols=75 Identities=17% Similarity=0.197 Sum_probs=48.2
Q ss_pred CCCCchHHHHHHHHHhh---hcCCCCeEEEEcCCCCCcccccccCC--CC---------eEeecCCchhhHHHhhCCCce
Q 044553 149 PPNMCKGVVIERIQASL---SKEGNKKIIYLGDGSGDYCPSLKLSE--GD---------HVMPRKNFPLWDLIIRNPMLI 214 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~---~~~~~~~~i~vGDs~~Di~~a~~~~~--~~---------~~~~~~~~~~~~l~~~~~~~~ 214 (275)
+.+..|+.+++.++... +.. ++.++++||..||..+-..++. .+ +.+ +-|. ..-
T Consensus 758 p~gvnKG~Al~~Ll~~~~~~g~~-~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v-~VG~----------~~S 825 (854)
T PLN02205 758 PQGVSKGLVAKRLLSIMQERGML-PDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFAC-TVGQ----------KPS 825 (854)
T ss_pred eCCCCHHHHHHHHHHHHHhcCCC-cccEEEEcCCccHHHHHHHhhhhccCCcccccccceeE-EECC----------CCc
Confidence 56788999999998543 332 5799999999999966544331 11 111 1111 111
Q ss_pred eEEEeeCCChHHHHHHHHHHHH
Q 044553 215 KAEIHEWTDGEELEQILLHLVN 236 (275)
Q Consensus 215 ~~~~~~~~~~~el~~~l~~~~~ 236 (275)
.| ....++..|+.++|+.+..
T Consensus 826 ~A-~y~L~d~~eV~~lL~~L~~ 846 (854)
T PLN02205 826 KA-KYYLDDTAEIVRLMQGLAS 846 (854)
T ss_pred cC-eEecCCHHHHHHHHHHHHh
Confidence 23 2357999999999987763
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.021 Score=48.85 Aligned_cols=42 Identities=17% Similarity=0.175 Sum_probs=33.0
Q ss_pred cCCCCCCHHHHHHHHHHc-CCcEEEEeCCCHHHHHHHHHHcCC
Q 044553 69 RIPIHPRVVPAIKSAHAL-GCELRIVSDANLFFIETILEHLGI 110 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~-g~~~~IvS~~~~~~i~~~l~~~gl 110 (275)
...+.+++.++|+.|.++ +.-++|+|+.+...++..+.-.++
T Consensus 38 ~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i 80 (266)
T COG1877 38 AAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGI 80 (266)
T ss_pred ccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCc
Confidence 366788999999999987 345999999999888877763333
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.0091 Score=50.62 Aligned_cols=71 Identities=18% Similarity=0.098 Sum_probs=48.2
Q ss_pred CchHHHHHHHHHhhhcCCCCeEEEEcCCCCCccccccc-------CCCCeEeecCCchhhHHHhhCCCceeEEEeeCCCh
Q 044553 152 MCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKL-------SEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDG 224 (275)
Q Consensus 152 ~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~-------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 224 (275)
..|...++.++..++.. +..++|+||+.+|+.+...+ +...+.+. .+. ....+ ....+++
T Consensus 166 ~~Kg~a~~~~~~~~~~~-~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g~----------~~~~A-~~~~~~~ 232 (244)
T TIGR00685 166 VNKGEIVKRLLWHQPGS-GISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SGS----------KKTVA-KFHLTGP 232 (244)
T ss_pred CCHHHHHHHHHHhcccC-CCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cCC----------cCCCc-eEeCCCH
Confidence 45999999999988765 37899999999999887655 21122221 110 11123 3367899
Q ss_pred HHHHHHHHHHH
Q 044553 225 EELEQILLHLV 235 (275)
Q Consensus 225 ~el~~~l~~~~ 235 (275)
.++.++|+.+.
T Consensus 233 ~~v~~~L~~l~ 243 (244)
T TIGR00685 233 QQVLEFLGLLV 243 (244)
T ss_pred HHHHHHHHHHh
Confidence 99999987664
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.041 Score=51.90 Aligned_cols=133 Identities=17% Similarity=0.160 Sum_probs=78.5
Q ss_pred ceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHHHHH
Q 044553 3 GIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAIKS 82 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~ 82 (275)
-++||-|+||||+.++.+=.++-.+|.+ | -+.|+..+...
T Consensus 530 ~kIVISDIDGTITKSDvLGh~lp~iGkD-----------W-----------------------------Th~GVAkLyt~ 569 (738)
T KOG2116|consen 530 DKIVISDIDGTITKSDVLGHVLPMIGKD-----------W-----------------------------THTGVAKLYTK 569 (738)
T ss_pred CcEEEecCCCceEhhhhhhhhhhhhcCc-----------c-----------------------------hhhhHHHHHHH
Confidence 3789999999999998644443333321 1 14677788888
Q ss_pred HHHcCCcEEEEeCC---CHHHHHHHHHHcCCcCC--cc--eEecCCCccCCC--CceeecccCCCCCCCCCCCcCCCCCc
Q 044553 83 AHALGCELRIVSDA---NLFFIETILEHLGIRDC--FS--EINTNPGFVDEE--GRLRIFPFHDFTKCSHGCNLCPPNMC 153 (275)
Q Consensus 83 L~~~g~~~~IvS~~---~~~~i~~~l~~~gl~~~--fd--~i~~~~~~~~~~--g~~~~kp~~~~~~~~~~~~~~~~~~~ 153 (275)
.+++||++.-+|+. .....+..|..+.-+.. -+ .|++-+..+.+= ..+..||. .-
T Consensus 570 Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPdGPViLSPd~lf~Al~REVI~RkPe----------------~F 633 (738)
T KOG2116|consen 570 IKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPDGPVILSPDSLFAALHREVIERKPE----------------VF 633 (738)
T ss_pred HHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCCCCEEeCCCcchHHHHHHHHHcCch----------------hh
Confidence 89999999999975 34445555554432221 11 233322222110 01122332 33
Q ss_pred hHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 154 KGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 154 K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
|-.+|+.+..-+......-..-+|...+|.-.-+++|.
T Consensus 634 KIAcL~DIk~LF~p~~nPFYAgFGNR~TDviSY~~VgV 671 (738)
T KOG2116|consen 634 KIACLTDIKNLFPPSGNPFYAGFGNRITDVISYRQVGV 671 (738)
T ss_pred hHHHHHHHHHhcCCCCCceeeecCCCcccceeeeeecC
Confidence 78888888876652221245568999999976666555
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.01 Score=50.29 Aligned_cols=32 Identities=13% Similarity=0.162 Sum_probs=24.2
Q ss_pred CCCCCCHHHHHHHHHHc-CCcEEEEeCCCHHHH
Q 044553 70 IPIHPRVVPAIKSAHAL-GCELRIVSDANLFFI 101 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~-g~~~~IvS~~~~~~i 101 (275)
..+.|++.+.|+.|.+. +..++|+|+.+...+
T Consensus 24 ~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~ 56 (244)
T TIGR00685 24 AVVSDRLLTILQKLAARPHNAIWIISGRKFLEK 56 (244)
T ss_pred cCCCHHHHHHHHHHHhCCCCeEEEEECCChhhc
Confidence 45678888999999776 567889999864433
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.015 Score=50.08 Aligned_cols=48 Identities=19% Similarity=0.094 Sum_probs=38.6
Q ss_pred CCCCCchHHHHHHHHHhhhc---CCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 148 CPPNMCKGVVIERIQASLSK---EGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~---~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
.+.+..|..+++.++..+++ . ++++++||||.||+.|-.. +++.++-+
T Consensus 182 ~~~g~sKg~al~~l~~~lgi~~~~-~~~viafGDs~NDi~Ml~~---ag~gvAM~ 232 (271)
T PRK03669 182 LDASAGKDQAANWLIATYQQLSGT-RPTTLGLGDGPNDAPLLDV---MDYAVVVK 232 (271)
T ss_pred ecCCCCHHHHHHHHHHHHHhhcCC-CceEEEEcCCHHHHHHHHh---CCEEEEec
Confidence 56778899999999999987 5 4899999999999998854 44454444
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.028 Score=57.99 Aligned_cols=41 Identities=15% Similarity=0.072 Sum_probs=37.0
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGI 110 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl 110 (275)
-++.+|+.++++.|++.|+++.++|+.....+..+....|+
T Consensus 725 D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~L 765 (1178)
T PLN03190 725 DKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKL 765 (1178)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCC
Confidence 47899999999999999999999999988888888877766
|
|
| >KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.013 Score=51.28 Aligned_cols=120 Identities=14% Similarity=0.207 Sum_probs=68.2
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHc---CCcCCcceEecCCCccCCCCcee--ecccCCCCCCCCCCC
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHL---GIRDCFSEINTNPGFVDEEGRLR--IFPFHDFTKCSHGCN 146 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~---gl~~~fd~i~~~~~~~~~~g~~~--~kp~~~~~~~~~~~~ 146 (275)
--|....+|+.|+++|-++.++||++-.++..-++.+ .+.++||.|+.-.... ..+. .+|..-+.+.....-
T Consensus 241 r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP---~Fftde~rPfR~~dek~~sl~ 317 (510)
T KOG2470|consen 241 RNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKP---EFFTDERRPFRKYDEKRGSLL 317 (510)
T ss_pred ccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCC---cccccccCcchhhcccccchh
Confidence 3467788999999999999999999999988777754 3557789776422100 0000 112111111100000
Q ss_pred c---C---CCCCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccc-cccCCCCeE
Q 044553 147 L---C---PPNMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPS-LKLSEGDHV 195 (275)
Q Consensus 147 ~---~---~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a-~~~~~~~~~ 195 (275)
+ - +..-.+...+..+++--+..++ +++|+||. .+|+.-. ...||..-+
T Consensus 318 wdkv~klekgkiYy~G~l~~flelt~WrG~-~VlYFGDHlySDLad~tlkhgWRTgA 373 (510)
T KOG2470|consen 318 WDKVDKLEKGKIYYQGNLKSFLELTGWRGP-RVLYFGDHLYSDLADLTLKHGWRTGA 373 (510)
T ss_pred hhhhhhcccCceeeeccHHHHHHHhccCCC-eeEEecCcchhhhhhhHhhccccccc
Confidence 0 0 0111122345556655556664 99999999 6788433 245664433
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.0056 Score=52.51 Aligned_cols=43 Identities=14% Similarity=0.196 Sum_probs=36.0
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
.+.+..|..+++.++..+++. ++++++|||+.||+.+...+|.
T Consensus 191 ~~~gvsKg~al~~l~~~~gi~-~~~v~afGD~~NDi~Ml~~ag~ 233 (270)
T PRK10513 191 LDKRVNKGTGVKSLAEHLGIK-PEEVMAIGDQENDIAMIEYAGV 233 (270)
T ss_pred eCCCCChHHHHHHHHHHhCCC-HHHEEEECCchhhHHHHHhCCc
Confidence 355677999999999999876 4899999999999999865443
|
|
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.12 Score=50.53 Aligned_cols=141 Identities=15% Similarity=0.115 Sum_probs=85.8
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcc-eEecCCCccCC-CCceeecccCC--CCCCCCCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFS-EINTNPGFVDE-EGRLRIFPFHD--FTKCSHGC 145 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd-~i~~~~~~~~~-~g~~~~kp~~~--~~~~~~~~ 145 (275)
-+.+||+++.++.+++.|+.+-.||+..-..++.+....|+-.--+ .+.--...|.. ......+-.|. ....
T Consensus 646 DPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlAR---- 721 (1034)
T KOG0204|consen 646 DPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLAR---- 721 (1034)
T ss_pred CCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeec----
Confidence 3688999999999999999999999999999999999999743211 11111111110 00000111111 0011
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC--CchhhHHHhhCCCceeEEEeeCCC
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK--NFPLWDLIIRNPMLIKAEIHEWTD 223 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~ 223 (275)
.....|...++.+... .+-+.+-||+.||-.+. +.+|+.++-+ |. +-..+.... +..=++
T Consensus 722 ---SSP~DK~lLVk~L~~~-----g~VVAVTGDGTNDaPAL---keADVGlAMGIaGT---eVAKEaSDI----Ii~DDN 783 (1034)
T KOG0204|consen 722 ---SSPNDKHLLVKGLIKQ-----GEVVAVTGDGTNDAPAL---KEADVGLAMGIAGT---EVAKEASDI----IILDDN 783 (1034)
T ss_pred ---CCCchHHHHHHHHHhc-----CcEEEEecCCCCCchhh---hhcccchhccccch---hhhhhhCCe----EEEcCc
Confidence 1234588888888743 24556789999998766 4467777643 33 333333322 234478
Q ss_pred hHHHHHHHH
Q 044553 224 GEELEQILL 232 (275)
Q Consensus 224 ~~el~~~l~ 232 (275)
|+.+...++
T Consensus 784 FssIVk~v~ 792 (1034)
T KOG0204|consen 784 FSSIVKAVK 792 (1034)
T ss_pred hHHHHHHHH
Confidence 888877665
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.0057 Score=52.36 Aligned_cols=50 Identities=22% Similarity=0.256 Sum_probs=40.0
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEee
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMP 197 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~ 197 (275)
++.+.+..|...++.++..+++. ++++++|||+.||+.+-..+|. +++..
T Consensus 183 eI~~~gvsKg~al~~l~~~lgi~-~~~viafGD~~NDi~Ml~~ag~-~vAm~ 232 (266)
T PRK10976 183 EVMAGGVSKGHALEAVAKKLGYS-LKDCIAFGDGMNDAEMLSMAGK-GCIMG 232 (266)
T ss_pred EEEcCCCChHHHHHHHHHHcCCC-HHHeEEEcCCcccHHHHHHcCC-Ceeec
Confidence 44567788999999999999876 4899999999999998866554 34433
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.0077 Score=50.68 Aligned_cols=33 Identities=6% Similarity=0.091 Sum_probs=22.6
Q ss_pred HHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 78 PAIKSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 78 e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
+.++ ++++|++++++|+.+...+..+++.+++.
T Consensus 22 ~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~ 54 (236)
T TIGR02471 22 ELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLP 54 (236)
T ss_pred HHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCC
Confidence 3444 35667777777777777777777777664
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.019 Score=49.12 Aligned_cols=49 Identities=20% Similarity=0.192 Sum_probs=39.3
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHH---HHHHHHHHcCCcCCcceEecC
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLF---FIETILEHLGIRDCFSEINTN 120 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~---~i~~~l~~~gl~~~fd~i~~~ 120 (275)
+.|++.++|+.|+++|++++++||++.. .+...++.+|++--.+.|+++
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~ts 73 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVFTP 73 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEcH
Confidence 6899999999999999999999996544 466777888986444566654
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.0068 Score=52.12 Aligned_cols=45 Identities=16% Similarity=0.175 Sum_probs=37.6
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
++.+.+..|...++.++..+++. ++++++|||+.||+.|-..+|.
T Consensus 181 eI~~~g~sKg~al~~l~~~~gi~-~~~v~afGD~~NDi~Ml~~ag~ 225 (272)
T PRK15126 181 EVLPVGCNKGAALAVLSQHLGLS-LADCMAFGDAMNDREMLGSVGR 225 (272)
T ss_pred EeecCCCChHHHHHHHHHHhCCC-HHHeEEecCCHHHHHHHHHcCC
Confidence 34567788999999999999886 4899999999999998865443
|
|
| >COG4850 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.21 Score=43.46 Aligned_cols=32 Identities=19% Similarity=0.213 Sum_probs=27.3
Q ss_pred cCCCCCCHHHHHHHHHHcC-CcEEEEeCCCHHH
Q 044553 69 RIPIHPRVVPAIKSAHALG-CELRIVSDANLFF 100 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g-~~~~IvS~~~~~~ 100 (275)
.-.++||+..+.+.|.+.| .++.-+||++-..
T Consensus 194 tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~ 226 (373)
T COG4850 194 TRQVIPGVSAWYRALTNLGDAPVFYVSNSPWQL 226 (373)
T ss_pred ccCCCCCHHHHHHHHHhcCCCCeEEecCChhHh
Confidence 4568999999999999987 8999999987543
|
|
| >COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.15 Score=38.87 Aligned_cols=30 Identities=17% Similarity=0.377 Sum_probs=26.8
Q ss_pred HHhcCCCCCCHHHHHHHHHHcCCcEEEEeCC
Q 044553 66 VLKRIPIHPRVVPAIKSAHALGCELRIVSDA 96 (275)
Q Consensus 66 ~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~ 96 (275)
+++.+.+.|++.+++++|-+. |.++|+|..
T Consensus 63 fFRnL~V~p~aq~v~keLt~~-y~vYivtaa 92 (180)
T COG4502 63 FFRNLGVQPFAQTVLKELTSI-YNVYIVTAA 92 (180)
T ss_pred hhhhcCccccHHHHHHHHHhh-heEEEEEec
Confidence 567788999999999999987 999999986
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.012 Score=50.04 Aligned_cols=45 Identities=18% Similarity=0.273 Sum_probs=37.6
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
++.+.+..|...++.++..++.. ++++++|||+.||+.+...++.
T Consensus 181 eI~~~~~~K~~~i~~~~~~~~~~-~~~~~~~GD~~nD~~m~~~~~~ 225 (256)
T TIGR00099 181 EITAKGVSKGSALQSLAEALGIS-LEDVIAFGDGMNDIEMLEAAGY 225 (256)
T ss_pred EecCCCCChHHHHHHHHHHcCCC-HHHEEEeCCcHHhHHHHHhCCc
Confidence 34567788999999999988765 4899999999999999866554
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.019 Score=48.46 Aligned_cols=45 Identities=9% Similarity=0.053 Sum_probs=35.0
Q ss_pred CCchHHHHHHHHHhhhcCCCCeE-EEEcCCC-CCcccccccCCCCeEe
Q 044553 151 NMCKGVVIERIQASLSKEGNKKI-IYLGDGS-GDYCPSLKLSEGDHVM 196 (275)
Q Consensus 151 ~~~K~~~l~~~~~~~~~~~~~~~-i~vGDs~-~Di~~a~~~~~~~~~~ 196 (275)
++++...++.++.+++..+ +++ +||||+. +||.+|+++|+..+++
T Consensus 187 ~KP~~~~~~~~~~~~~~~~-~~~~~~IGD~~~~Di~~A~~~G~~~i~v 233 (236)
T TIGR01460 187 GKPSPAIYRAALNLLQARP-ERRDVMVGDNLRTDILGAKNAGFDTLLV 233 (236)
T ss_pred cCCCHHHHHHHHHHhCCCC-ccceEEECCCcHHHHHHHHHCCCcEEEE
Confidence 3556788888888876554 455 9999997 8999999988876654
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.058 Score=53.59 Aligned_cols=40 Identities=10% Similarity=0.214 Sum_probs=33.2
Q ss_pred CCCCCCHHHHHHHHHHc-CCcEEEEeCCCHHHHHHHHHHcC
Q 044553 70 IPIHPRVVPAIKSAHAL-GCELRIVSDANLFFIETILEHLG 109 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~-g~~~~IvS~~~~~~i~~~l~~~g 109 (275)
..+.|++.++|+.|.+. +-.++|+|+.....++..+...+
T Consensus 531 a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~ 571 (797)
T PLN03063 531 LGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYN 571 (797)
T ss_pred CCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCC
Confidence 55678899999999876 67899999999999998887543
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.076 Score=53.20 Aligned_cols=40 Identities=8% Similarity=0.258 Sum_probs=33.7
Q ss_pred CCCCCCHHHHHHHHHHc-CCcEEEEeCCCHHHHHHHHHHcC
Q 044553 70 IPIHPRVVPAIKSAHAL-GCELRIVSDANLFFIETILEHLG 109 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~-g~~~~IvS~~~~~~i~~~l~~~g 109 (275)
..+.|++.++|+.|.+. +..++|+|+.....++..+...+
T Consensus 621 a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~ 661 (934)
T PLN03064 621 LRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFD 661 (934)
T ss_pred cCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCC
Confidence 45778899999999875 67899999999999998887644
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=94.43 E-value=0.023 Score=54.12 Aligned_cols=46 Identities=24% Similarity=0.329 Sum_probs=38.4
Q ss_pred CCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 145 CNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 145 ~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
.++.+.+..|...++.++..+++. ++++++|||+.||+.|-..+|.
T Consensus 499 lEI~p~gvSKG~ALk~L~e~lGI~-~eeviAFGDs~NDIeMLe~AG~ 544 (580)
T PLN02887 499 LEIVPPGTSKGNGVKMLLNHLGVS-PDEIMAIGDGENDIEMLQLASL 544 (580)
T ss_pred EEEecCCCCHHHHHHHHHHHcCCC-HHHEEEEecchhhHHHHHHCCC
Confidence 344677888999999999999876 4899999999999999865443
|
|
| >KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.36 E-value=0.14 Score=42.41 Aligned_cols=100 Identities=16% Similarity=0.186 Sum_probs=68.7
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcC---Cc----CCcceEecCCCccCCCCceeecccCCCCCCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLG---IR----DCFSEINTNPGFVDEEGRLRIFPFHDFTKCS 142 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~g---l~----~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~ 142 (275)
...|+++.+.++..+..|++++|-|+++....+.+..+.+ +. .|||.-++.-.
T Consensus 122 ~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gyfDt~iG~K~-------------------- 181 (254)
T KOG2630|consen 122 AHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGYFDTTIGLKV-------------------- 181 (254)
T ss_pred ccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhhhhcccccee--------------------
Confidence 4789999999999999999999999999887777666532 11 23333222111
Q ss_pred CCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCc
Q 044553 143 HGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNF 201 (275)
Q Consensus 143 ~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~ 201 (275)
-...........+.. +.++++.-|-..-..+|+.+|.......|.|.
T Consensus 182 -----------e~~sy~~I~~~Ig~s-~~eiLfLTd~~~Ea~aa~~aGl~a~l~~rPgn 228 (254)
T KOG2630|consen 182 -----------ESQSYKKIGHLIGKS-PREILFLTDVPREAAAARKAGLQAGLVSRPGN 228 (254)
T ss_pred -----------hhHHHHHHHHHhCCC-hhheEEeccChHHHHHHHhcccceeeeecCCC
Confidence 123344444444444 47999999988888888887876666667655
|
|
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.23 Score=45.59 Aligned_cols=85 Identities=15% Similarity=0.141 Sum_probs=59.2
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCC
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPN 151 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~ 151 (275)
+|.....++..|+++|+-++|+|-....-++.++++.. +.|+.-++.. .+.+.|
T Consensus 256 ~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp-----~MiLkeedfa-----------------~~~iNW---- 309 (574)
T COG3882 256 AFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHP-----DMILKEEDFA-----------------VFQINW---- 309 (574)
T ss_pred hHHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhCC-----CeEeeHhhhh-----------------hheecC----
Confidence 34455688999999999999999888888888887642 3454332211 011111
Q ss_pred CchHHHHHHHHHhhhcCCCCeEEEEcCCCCCc
Q 044553 152 MCKGVVIERIQASLSKEGNKKIIYLGDGSGDY 183 (275)
Q Consensus 152 ~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di 183 (275)
.+|.+-+.....+++.. .+.++|+.|++...
T Consensus 310 ~~K~eNirkIAkklNlg-~dSmvFiDD~p~Er 340 (574)
T COG3882 310 DPKAENIRKIAKKLNLG-LDSMVFIDDNPAER 340 (574)
T ss_pred CcchhhHHHHHHHhCCC-ccceEEecCCHHHH
Confidence 23789999999988764 47899999986544
|
|
| >KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.15 E-value=0.18 Score=40.92 Aligned_cols=44 Identities=16% Similarity=0.273 Sum_probs=27.9
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCC--cCCcceEec
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGI--RDCFSEINT 119 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl--~~~fd~i~~ 119 (275)
..|.+.++|+.|++. +.+.+|-++.-. ...+++|- -..||.+++
T Consensus 29 ~~~e~~~~l~~lr~~-v~ig~VggsDl~---k~~eqlG~~Vl~~fDY~F~ 74 (252)
T KOG3189|consen 29 VTPEMLEFLQKLRKK-VTIGFVGGSDLS---KQQEQLGDNVLEEFDYVFS 74 (252)
T ss_pred CCHHHHHHHHHHhhh-eEEEEeecHHHH---HHHHHhchhHHhhhccccc
Confidence 467788899998876 778888765433 34455553 244666653
|
|
| >KOG1618 consensus Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.09 E-value=0.26 Score=42.86 Aligned_cols=28 Identities=7% Similarity=0.046 Sum_probs=24.2
Q ss_pred CCCCCHHHHHHHHHHc----CCcEEEEeCCCH
Q 044553 71 PIHPRVVPAIKSAHAL----GCELRIVSDANL 98 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~----g~~~~IvS~~~~ 98 (275)
.+.|++.++|+.|.++ .++++++||+..
T Consensus 51 ~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg 82 (389)
T KOG1618|consen 51 RPIPGALKALRRLVDNQGQLKIPFVFLTNGGG 82 (389)
T ss_pred CCCcchHHHHHHHHhcCCCeeccEEEEeCCCC
Confidence 4679999999999988 799999999854
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=94.05 E-value=0.057 Score=45.40 Aligned_cols=36 Identities=19% Similarity=0.133 Sum_probs=22.0
Q ss_pred cCCCCCCHHHHHHHHHHc-CCcEEEEeCCCHHHHHHH
Q 044553 69 RIPIHPRVVPAIKSAHAL-GCELRIVSDANLFFIETI 104 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~-g~~~~IvS~~~~~~i~~~ 104 (275)
...+.|++.++|+.|.+. +..++|+|+.+....+..
T Consensus 17 ~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~ 53 (235)
T PF02358_consen 17 AAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERF 53 (235)
T ss_dssp G----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH
T ss_pred ccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHh
Confidence 456778899999999877 346999999987774433
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.72 E-value=0.61 Score=39.77 Aligned_cols=70 Identities=23% Similarity=0.336 Sum_probs=56.5
Q ss_pred CCceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHHH
Q 044553 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAI 80 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L 80 (275)
|++|+|+||+||||++.+. .+.|...+.|
T Consensus 1 M~~kli~~DlDGTLl~~~~---------------------------------------------------~i~~~~~~ai 29 (272)
T PRK10530 1 MTYRVIALDLDGTLLTPKK---------------------------------------------------TILPESLEAL 29 (272)
T ss_pred CCccEEEEeCCCceECCCC---------------------------------------------------ccCHHHHHHH
Confidence 7789999999999987631 2346677999
Q ss_pred HHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCc
Q 044553 81 KSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGF 123 (275)
Q Consensus 81 ~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~ 123 (275)
++|+++|++++++|+.+...+...++.+++..+ .|.+|...
T Consensus 30 ~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~--~I~~NGa~ 70 (272)
T PRK10530 30 ARAREAGYKVIIVTGRHHVAIHPFYQALALDTP--AICCNGTY 70 (272)
T ss_pred HHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCC--EEEcCCcE
Confidence 999999999999999999999999999988643 45555443
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=93.24 E-value=0.066 Score=44.82 Aligned_cols=41 Identities=22% Similarity=0.218 Sum_probs=32.4
Q ss_pred CCchHHHHHHHHHhhhcC-CCCeEEEEcCCCCCcccccccCC
Q 044553 151 NMCKGVVIERIQASLSKE-GNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 151 ~~~K~~~l~~~~~~~~~~-~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
+..|..+++.++..++.. .+++++++||+.||+.+...++.
T Consensus 179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~ 220 (225)
T TIGR02461 179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDL 220 (225)
T ss_pred CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCC
Confidence 566999999998887542 24689999999999988865554
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=92.74 E-value=0.13 Score=43.63 Aligned_cols=44 Identities=23% Similarity=0.328 Sum_probs=34.7
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcC----CCCCcccccccCCCCeEee
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGD----GSGDYCPSLKLSEGDHVMP 197 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGD----s~~Di~~a~~~~~~~~~~~ 197 (275)
+.+..|...++.++.. +++++++|| +.||+.+-..++.+++.++
T Consensus 184 ~~gvsKg~al~~L~~~-----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~ 231 (247)
T PTZ00174 184 PKGWDKTYCLRHLEND-----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK 231 (247)
T ss_pred eCCCcHHHHHHHHHhh-----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC
Confidence 4566799999999987 379999999 8999998865555555554
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=92.56 E-value=0.24 Score=42.03 Aligned_cols=34 Identities=21% Similarity=0.268 Sum_probs=28.6
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcC----CCCCccccc
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGD----GSGDYCPSL 187 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGD----s~~Di~~a~ 187 (275)
-+.+..|..+++.++ ++++++++|| +.||+.+-.
T Consensus 184 ~~~gvnKg~al~~L~------~~~e~~aFGD~~~~~~ND~eMl~ 221 (245)
T PLN02423 184 FPQGWDKTYCLQFLE------DFDEIHFFGDKTYEGGNDHEIFE 221 (245)
T ss_pred eeCCCCHHHHHHHhc------CcCeEEEEeccCCCCCCcHHHHh
Confidence 356778999999999 2689999999 799998873
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.91 E-value=2.3 Score=43.74 Aligned_cols=41 Identities=10% Similarity=0.012 Sum_probs=33.5
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGI 110 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl 110 (275)
-++-+|++|.|+.|++.|+++.++|+.-.+.+-.+.-..++
T Consensus 650 DkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~L 690 (1151)
T KOG0206|consen 650 DKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRL 690 (1151)
T ss_pred chhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcC
Confidence 46789999999999999999999999876666665555443
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=89.54 E-value=0.42 Score=41.50 Aligned_cols=44 Identities=9% Similarity=0.081 Sum_probs=32.5
Q ss_pred CCchHHHHHHHHHhhhcC-CCCeEEEEcCCCCCcccccccCCCCeEee
Q 044553 151 NMCKGVVIERIQASLSKE-GNKKIIYLGDGSGDYCPSLKLSEGDHVMP 197 (275)
Q Consensus 151 ~~~K~~~l~~~~~~~~~~-~~~~~i~vGDs~~Di~~a~~~~~~~~~~~ 197 (275)
+.+|..+++.+...|... .+-.++.+|||+||+.+-.. +++.+.
T Consensus 206 ~~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~---~D~~vv 250 (302)
T PRK12702 206 SLPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRW---SEQKVV 250 (302)
T ss_pred CCCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHh---CCeeEE
Confidence 456999999999887643 22389999999999988744 454443
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.57 E-value=1.5 Score=43.18 Aligned_cols=42 Identities=17% Similarity=0.294 Sum_probs=37.4
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
.++.|+.+.+|+.|++.+++++.+|+.+.-.+-.+.+.+|+.
T Consensus 674 CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv 715 (1160)
T KOG0209|consen 674 CPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIV 715 (1160)
T ss_pred CCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeee
Confidence 478899999999999999999999998887888888888874
|
|
| >PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3 | Back alignment and domain information |
|---|
Probab=87.99 E-value=0.84 Score=38.73 Aligned_cols=15 Identities=27% Similarity=0.381 Sum_probs=13.0
Q ss_pred EEEEEcCCcccCCcc
Q 044553 5 VVIFDFDKTIIDCDS 19 (275)
Q Consensus 5 ~viFD~DGTL~d~~~ 19 (275)
-|.||.|++|.+.++
T Consensus 123 RIAFDgDaVLfsDes 137 (264)
T PF06189_consen 123 RIAFDGDAVLFSDES 137 (264)
T ss_pred EEEEcCCeEeecCcc
Confidence 489999999998866
|
1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm |
| >TIGR01658 EYA-cons_domain eyes absent protein conserved domain | Back alignment and domain information |
|---|
Probab=87.69 E-value=1.3 Score=37.22 Aligned_cols=39 Identities=13% Similarity=0.146 Sum_probs=31.2
Q ss_pred chHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCC
Q 044553 153 CKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEG 192 (275)
Q Consensus 153 ~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~ 192 (275)
+|...++++..+++... -.-++|||+..--.+|+.+++.
T Consensus 214 GK~~cFe~I~~Rfg~p~-~~f~~IGDG~eEe~aAk~l~wP 252 (274)
T TIGR01658 214 GKLQCFKWIKERFGHPK-VRFCAIGDGWEECTAAQAMNWP 252 (274)
T ss_pred chHHHHHHHHHHhCCCC-ceEEEeCCChhHHHHHHhcCCC
Confidence 48899999999987643 4788999998877888776663
|
This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences. |
| >KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription] | Back alignment and domain information |
|---|
Probab=87.51 E-value=2.4 Score=40.79 Aligned_cols=52 Identities=17% Similarity=0.238 Sum_probs=44.5
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc-CCc-ceEecCCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR-DCF-SEINTNPG 122 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~-~~f-d~i~~~~~ 122 (275)
+++.|++.+||+++.+. |.++|.|-+.+.++..+++-+.-. .|| |.|+|.+.
T Consensus 200 vKlRP~~~efL~~~skl-femhVyTmg~R~YA~~i~~liDP~~~lF~dRIisrde 253 (635)
T KOG0323|consen 200 VKLRPFVHEFLKEANKL-FEMHVYTMGTRDYALEIAKLIDPEGKYFGDRIISRDE 253 (635)
T ss_pred EEeCccHHHHHHHHHhh-ceeEEEeccchHHHHHHHHHhCCCCccccceEEEecC
Confidence 67899999999999976 999999999999999999987655 466 57887664
|
|
| >COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only] | Back alignment and domain information |
|---|
Probab=86.98 E-value=0.46 Score=43.07 Aligned_cols=39 Identities=8% Similarity=-0.004 Sum_probs=24.8
Q ss_pred CchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 152 MCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 152 ~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
.-|...++.++..+....| -..-+|...+|..+-..+|.
T Consensus 477 ~FKiayLndl~slf~e~~P-FyAGFGNriTDvisY~~vgI 515 (580)
T COG5083 477 VFKIAYLNDLKSLFIEFDP-FYAGFGNRITDVISYSNVGI 515 (580)
T ss_pred HHHHHHHHHHHHhhCcCCh-hhccccccchhheeeccccC
Confidence 3477888888776643222 22348888999977655554
|
|
| >KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=85.70 E-value=0.43 Score=42.64 Aligned_cols=27 Identities=22% Similarity=0.277 Sum_probs=20.9
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDA 96 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~ 96 (275)
..++|.+..=|..|.+.||.++|.||.
T Consensus 103 ~~l~~~vp~Klktl~~~g~~l~iftnq 129 (422)
T KOG2134|consen 103 RILFPEVPSKLKTLYQDGIKLFIFTNQ 129 (422)
T ss_pred eeeccccchhhhhhccCCeEEEEEecc
Confidence 345677778888888888888888875
|
|
| >KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription] | Back alignment and domain information |
|---|
Probab=85.31 E-value=0.19 Score=42.81 Aligned_cols=48 Identities=17% Similarity=0.216 Sum_probs=38.3
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCC-cCCcceEe
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGI-RDCFSEIN 118 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl-~~~fd~i~ 118 (275)
+.-+|++.++|...-+. +.+++.|++...++.+++..+.- ...+.+-+
T Consensus 130 V~kRP~vdeFL~~~s~~-~e~v~FTAs~~~Ya~~v~D~LD~~~~i~~~Rl 178 (262)
T KOG1605|consen 130 VRKRPHVDEFLSRVSKW-YELVLFTASLEVYADPLLDILDPDRKIISHRL 178 (262)
T ss_pred EEcCCCHHHHHHHhHHH-HHHHHHHhhhHHHHHHHHHHccCCCCeeeeee
Confidence 45679999999998876 99999999999999999998864 33444333
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=85.11 E-value=0.71 Score=44.70 Aligned_cols=40 Identities=20% Similarity=0.207 Sum_probs=32.0
Q ss_pred CCchHHHHHHHHHhhhcCCCCeEEEE--cCCCCCcccccccCC
Q 044553 151 NMCKGVVIERIQASLSKEGNKKIIYL--GDGSGDYCPSLKLSE 191 (275)
Q Consensus 151 ~~~K~~~l~~~~~~~~~~~~~~~i~v--GDs~~Di~~a~~~~~ 191 (275)
+.+|..+++.++..+++.. ++++.+ |||.||+.+-..++.
T Consensus 611 gvdKG~AL~~L~e~~gI~~-~eViafalGDs~NDisMLe~Ag~ 652 (694)
T PRK14502 611 GNDKGKAIKILNELFRLNF-GNIHTFGLGDSENDYSMLETVDS 652 (694)
T ss_pred CCCHHHHHHHHHHHhCCCc-cceEEEEcCCcHhhHHHHHhCCc
Confidence 4569999999999887653 677777 999999988855444
|
|
| >COG0731 Fe-S oxidoreductases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=84.24 E-value=1.9 Score=37.50 Aligned_cols=38 Identities=21% Similarity=0.269 Sum_probs=32.1
Q ss_pred cCCCCCCHHHHHHHHHHcC-CcEEEEeCCCHHHHHHHHHHcC
Q 044553 69 RIPIHPRVVPAIKSAHALG-CELRIVSDANLFFIETILEHLG 109 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g-~~~~IvS~~~~~~i~~~l~~~g 109 (275)
+..++|...++++.+++.| .+++||||++.. .+++.+.
T Consensus 90 EPTLy~~L~elI~~~k~~g~~~tflvTNgslp---dv~~~L~ 128 (296)
T COG0731 90 EPTLYPNLGELIEEIKKRGKKTTFLVTNGSLP---DVLEELK 128 (296)
T ss_pred CcccccCHHHHHHHHHhcCCceEEEEeCCChH---HHHHHhc
Confidence 5789999999999999999 799999999884 4445544
|
|
| >COG5663 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=84.05 E-value=2.8 Score=33.21 Aligned_cols=38 Identities=11% Similarity=0.021 Sum_probs=26.5
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHH
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILE 106 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~ 106 (275)
++..+..++...|..++++ .+++-+|+.-....+....
T Consensus 69 ke~l~~q~v~~~L~~~~e~-~~L~~itar~~dl~~iT~~ 106 (194)
T COG5663 69 KEALLAQLVKQVLPSLKEE-HRLIYITARKADLTRITYA 106 (194)
T ss_pred HHHHHHHHHHHHhHHHHhh-ceeeeeehhhHHHHHHHHH
Confidence 3455667888999999887 6788888876555444333
|
|
| >KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=83.20 E-value=2.6 Score=31.68 Aligned_cols=44 Identities=14% Similarity=0.113 Sum_probs=36.5
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCC-HHHHHHHHHHcCCc
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDAN-LFFIETILEHLGIR 111 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~-~~~i~~~l~~~gl~ 111 (275)
..+..|++++..|..|+++|+.++++|++. .+.+...|+.+.+.
T Consensus 41 ~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fkvk 85 (144)
T KOG4549|consen 41 EEMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFKVK 85 (144)
T ss_pred ceeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhccC
Confidence 457889999999999999999999999974 45677777776653
|
|
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=82.35 E-value=4.1 Score=41.66 Aligned_cols=64 Identities=17% Similarity=0.331 Sum_probs=43.1
Q ss_pred HHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeE-EEE
Q 044553 98 LFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKI-IYL 176 (275)
Q Consensus 98 ~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~-i~v 176 (275)
...++..|+..|+... .|++.... .+..- |....|..+|+++..++++.. +++ +++
T Consensus 923 v~elr~~Lr~~gLr~~--~iys~~~~-----~LDVl---------------P~~ASKgqAlRyL~~rwgi~l-~~v~Vfa 979 (1050)
T TIGR02468 923 VKELRKLLRIQGLRCH--AVYCRNGT-----RLNVI---------------PLLASRSQALRYLFVRWGIEL-ANMAVFV 979 (1050)
T ss_pred HHHHHHHHHhCCCceE--EEeecCCc-----Eeeee---------------eCCCCHHHHHHHHHHHcCCCh-HHeEEEe
Confidence 4577788888888643 45554311 11222 234559999999999998764 677 569
Q ss_pred cCCCC-Ccc
Q 044553 177 GDGSG-DYC 184 (275)
Q Consensus 177 GDs~~-Di~ 184 (275)
|||-+ |+.
T Consensus 980 GdSGntD~e 988 (1050)
T TIGR02468 980 GESGDTDYE 988 (1050)
T ss_pred ccCCCCCHH
Confidence 99988 964
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=81.09 E-value=3.1 Score=41.86 Aligned_cols=37 Identities=8% Similarity=0.026 Sum_probs=31.0
Q ss_pred CCCCCHHHHHHHH-HHcCCcEEEEeCCCHHHHHHHHHH
Q 044553 71 PIHPRVVPAIKSA-HALGCELRIVSDANLFFIETILEH 107 (275)
Q Consensus 71 ~~~pg~~e~L~~L-~~~g~~~~IvS~~~~~~i~~~l~~ 107 (275)
.+.|++.++|+.| ++.|..++|+|+.....++..+..
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 4557888999998 666899999999999988888864
|
|
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=81.08 E-value=2.8 Score=36.31 Aligned_cols=42 Identities=19% Similarity=0.213 Sum_probs=33.4
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHH---HHcCCc
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETIL---EHLGIR 111 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l---~~~gl~ 111 (275)
-.+.||+.+++..|++.|-.+.++||++...-+..+ +++|+.
T Consensus 37 ~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 37 EKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred CCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 456899999999999999999999998765554444 456765
|
|
| >COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=80.56 E-value=10 Score=35.00 Aligned_cols=98 Identities=18% Similarity=0.184 Sum_probs=66.9
Q ss_pred CCCCC--CHHHHHHHHHHcCCcEEEEeCC--CHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCC
Q 044553 70 IPIHP--RVVPAIKSAHALGCELRIVSDA--NLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGC 145 (275)
Q Consensus 70 ~~~~p--g~~e~L~~L~~~g~~~~IvS~~--~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~ 145 (275)
..++| ...++.+.+.++|-+++++|+- +...++..|...|.+-+--.++.+.. ++.+-+
T Consensus 96 evLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~~nipiY~S~e-------~rl~Kn---------- 158 (635)
T COG5610 96 EVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDFNNIPIYMSSE-------FRLKKN---------- 158 (635)
T ss_pred eEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCccCceeeecce-------eehhcc----------
Confidence 44454 4678999999999999999984 67788999999887643223443221 122211
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccccccCCCC
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSLKLSEGD 193 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~~~~~ 193 (275)
-...++..+..-+.+ +...+.+||. ..|+..++.+|.+.
T Consensus 159 --------Sg~LFk~Vlk~EnVd-~~~w~H~GDN~~aD~l~pk~LgI~T 198 (635)
T COG5610 159 --------SGNLFKAVLKLENVD-PKKWIHCGDNWVADYLKPKNLGIST 198 (635)
T ss_pred --------cchHHHHHHhhcCCC-hhheEEecCchhhhhcCccccchhH
Confidence 125666666655555 4789999999 57998888877654
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 275 | |||
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 4e-33 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 3e-08 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 2e-07 | |
| 2g09_A | 297 | Cytosolic 5'-nucleotidase III; uniprot Q9D020, UMP | 4e-07 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 8e-07 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 2e-06 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 2e-06 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 2e-05 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 2e-05 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 3e-05 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 5e-05 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 7e-05 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 9e-05 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 1e-04 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 1e-04 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 1e-04 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-04 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-04 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 1e-04 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 1e-04 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 2e-04 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 4e-04 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 5e-04 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 5e-04 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 6e-04 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 7e-04 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 7e-04 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 8e-04 |
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 4e-33
Identities = 51/250 (20%), Positives = 84/250 (33%), Gaps = 29/250 (11%)
Query: 4 IVVIFDFDKTIIDCDSDNFVVDELG---ATDLFNQLLP-TMPWNSLMDRMMKELHSQGKT 59
+I DFD TI D+ ++ L + +L T+ + RM L S K
Sbjct: 7 PFIICDFDGTITMNDNIINIMKTFAPPEWMALKDGVLSKTLSIKEGVGRMFGLLPSSLK- 65
Query: 60 IEDIVE-VLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEIN 118
E+I VL+ I + + ++S FF+ +LE + +D I
Sbjct: 66 -EEITSFVLEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKD---RIY 121
Query: 119 TNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGD 178
N D + +P CS+ C CK VI + E N+ II +GD
Sbjct: 122 CNHASFDNDYIHIDWPHSCKGTCSNQC-----GCCKPSVIHEL-----SEPNQYIIMIGD 171
Query: 179 GSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHLVNTI 238
D D R L + + D E+ + + ++
Sbjct: 172 SVTDVEA---AKLSDLCFARD--YLLNECREQ----NLNHLPYQDFYEIRKEIENVKEVQ 222
Query: 239 GSTNNNNSAQ 248
N N+ +
Sbjct: 223 EWLQNKNAGE 232
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} Length = 232 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 3e-08
Identities = 23/126 (18%), Positives = 40/126 (31%), Gaps = 20/126 (15%)
Query: 5 VVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNS-LMDRMMKELHS-------- 55
+ +FD D T++ DSD D L T N LM+R + +
Sbjct: 6 LALFDLDHTLLPLDSDYQWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEFM 65
Query: 56 ----QGKTIEDIVEVLKRI---PIHPRVVPA----IKSAHALGCELRIVSDANLFFIETI 104
+ ++ + I P + ++ A G +V+ N F I
Sbjct: 66 LGLLAAHSPVELAAWHEEFMRDVIRPSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPI 125
Query: 105 LEHLGI 110
G+
Sbjct: 126 ARAFGV 131
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 Length = 226 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 2e-07
Identities = 26/129 (20%), Positives = 48/129 (37%), Gaps = 17/129 (13%)
Query: 6 VIFDFDKTIID-----CDSDNFVVDELGAT---DLFNQLLPTMPWNSLMDRMMKELHSQG 57
IFD D +ID ++ V+ LG + + ++D G
Sbjct: 12 AIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNG 71
Query: 58 KTIEDIVE---------VLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHL 108
+ +++VE V + P+ P V A+ G + + S + L +E +L
Sbjct: 72 PSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMF 131
Query: 109 GIRDCFSEI 117
+RD F +
Sbjct: 132 DLRDSFDAL 140
|
| >2g09_A Cytosolic 5'-nucleotidase III; uniprot Q9D020, UMPH-1, pyrim nucleotidase 1, P5N-1, NT5C3 protein, AAH38029, BC038029, M LEAD poisoning; HET: PIN; 2.10A {Mus musculus} PDB: 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A Length = 297 | Back alignment and structure |
|---|
Score = 49.6 bits (118), Expect = 4e-07
Identities = 40/228 (17%), Positives = 70/228 (30%), Gaps = 48/228 (21%)
Query: 4 IVVIFDFDKTIIDC--------------DSDNFVVDELG--ATDLFNQLLP-----TMP- 41
+ +I DFD T+ D+ V DE L Q +
Sbjct: 44 LQIITDFDMTLSRFSYNGKRCPTCHNIIDNCKLVTDECRRKLLQLKEQYYAIEVDPVLTV 103
Query: 42 ---------WNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAIKSAHALGCELRI 92
W + ++ E +++IV + + G + I
Sbjct: 104 EEKFPYMVEWYTKSHGLLIEQGIPKAKLKEIVADSD-VMLKEGYENFFGKLQQHGIPVFI 162
Query: 93 VSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFP---FHDFTKCSHGCNLCP 149
S +E ++ G+ ++ +N DE G L+ F H F K H L
Sbjct: 163 FSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNK--HDGALKN 220
Query: 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMP 197
+ + N II LGD GD + ++ +H++
Sbjct: 221 TDYFS-----------QLKDNSNIILLGDSQGDLRMADGVANVEHILK 257
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} Length = 214 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 2e-06
Identities = 18/130 (13%), Positives = 37/130 (28%), Gaps = 20/130 (15%)
Query: 6 VIFDFDKTIID-----CDSDNFVVDELGAT---DLFNQLLPTMPWNSLMDRMMKELHSQG 57
+IFD D + D D + + G + + + +
Sbjct: 8 IIFDMDGVLFDTEKYYYDRRASFLGQKGISIDHLPPSFFIGGNTKQVW--ENILRDEYDK 65
Query: 58 KTIEDIVEVLKRI----------PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEH 107
+ + E I P V+ + + G E+ + S + I LE
Sbjct: 66 WDVSTLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEE 125
Query: 108 LGIRDCFSEI 117
++ F +
Sbjct: 126 NRLQGFFDIV 135
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 Length = 206 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 2e-06
Identities = 19/129 (14%), Positives = 38/129 (29%), Gaps = 17/129 (13%)
Query: 6 VIFDFDKTIIDCDSDNFVVDELGATDL----FNQLLPTMPWNSLMDR----------MMK 51
IFD I+D D + + T + + +R +
Sbjct: 10 YIFDLGNVIVDIDFNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEALC 69
Query: 52 ELHSQGKTIEDIVEVLKRI--PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILE-HL 108
+ + E + + + P V+ + G + ++S+ N E +
Sbjct: 70 HEMALPLSYEQFSHGWQAVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYP 129
Query: 109 GIRDCFSEI 117
IRD I
Sbjct: 130 EIRDAADHI 138
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A Length = 221 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 2e-05
Identities = 23/133 (17%), Positives = 50/133 (37%), Gaps = 23/133 (17%)
Query: 6 VIFDFDKTIID-----CDSDNFVVDELGATDLFNQLLPTMPWNSLMD--RMMKELHSQGK 58
V+FD D I D + + +E+G + Q + S D + + +L +
Sbjct: 5 VLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADKKV 64
Query: 59 TIEDIVEVLKR--------------IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETI 104
+ E+ E+ KR ++P ++ +K + ++ + S + +
Sbjct: 65 SAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASK--NGPFL 122
Query: 105 LEHLGIRDCFSEI 117
LE + + F I
Sbjct: 123 LERMNLTGYFDAI 135
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 2e-05
Identities = 24/143 (16%), Positives = 49/143 (34%), Gaps = 38/143 (26%)
Query: 6 VIFDFDKTIIDCDSDNFVVDELGA-----------TDL-------FNQLLPTMPWNSLMD 47
+FDFD T+++ + ++ L T F++ SL+
Sbjct: 7 AVFDFDSTLVNAE----TIESLARAWGVFDEVKTITLKAMNGETDFHK--------SLIL 54
Query: 48 RMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEH 107
R+ K L + ++ EV + +P+ + + + ++ S +
Sbjct: 55 RVSK-L--KNMPLKLAKEVCESLPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDL 111
Query: 108 LGIRDCFSEINTNPGFVDEEGRL 130
L + FS NT + E L
Sbjct: 112 LHLDAAFS--NT---LIVENDAL 129
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} Length = 200 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 3e-05
Identities = 11/126 (8%), Positives = 33/126 (26%), Gaps = 15/126 (11%)
Query: 6 VIFDFDKTIIDCDSDNFVVDELGAT---DLFNQLLPTMPWNSLMDR----------MMKE 52
+ +D ++ D ++ D + ++ +
Sbjct: 7 LFWDIGGVLLTNGWDREQRADVAQRFGLDTDDFTERHRLAAPELELGRMTLAEYLEQVVF 66
Query: 53 LHSQGKTIEDIVEVLKRIP-IHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR 111
+ T ED V++ P V+ + + +++ E + G+
Sbjct: 67 YQPRDFTPEDFRAVMEEQSQPRPEVLALARDLGQ-RYRMYSLNNEGRDLNEYRIRTFGLG 125
Query: 112 DCFSEI 117
+
Sbjct: 126 EFLLAF 131
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 5e-05
Identities = 30/144 (20%), Positives = 55/144 (38%), Gaps = 38/144 (26%)
Query: 5 VVIFDFDKTIIDCDSDNFVVDELGA-----------TDL-------FNQLLPTMPWNSLM 46
+++ D D T I + +DE+ T+ F Q SL
Sbjct: 109 LIVLDMDSTAIQIE----CIDEIAKLAGVGEEVAEVTERAMQGELDFEQ--------SLR 156
Query: 47 DRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILE 106
R+ K L + + + +V + +P+ P + + + HA G ++ I S +F + + E
Sbjct: 157 LRVSK-L--KDAPEQILSQVRETLPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKE 213
Query: 107 HLGIRDCFSEINTNPGFVDEEGRL 130
L + S NT G+L
Sbjct: 214 QLSLDYAQS--NT---LEIVSGKL 232
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 7e-05
Identities = 19/132 (14%), Positives = 37/132 (28%), Gaps = 23/132 (17%)
Query: 6 VIFDFDKTIID-----CDSDNFVVDELG--ATDLFNQLLPTMPWNSLMDRMMKELHSQGK 58
IFD D T+ D + +D M ++ + +E G
Sbjct: 9 FIFDLDGTLTDSVYQNVAAWKEALDAENIPLAMWRIHRKIGMSGGLMLKSLSRET---GM 65
Query: 59 TIED-------------IVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETIL 105
+I D + +I P V +++ + I + + L
Sbjct: 66 SITDEQAERLSEKHAQAYERLQHQIIALPGAVELLETLDKENLKWCIATSGGIDTATINL 125
Query: 106 EHLGIRDCFSEI 117
+ L + I
Sbjct: 126 KALKLDINKINI 137
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 Length = 229 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 9e-05
Identities = 22/131 (16%), Positives = 56/131 (42%), Gaps = 15/131 (11%)
Query: 1 MSGI-VVIFDFDKTIID-----CDSDNFVVDELGAT---DLFNQLLPTMPWNSLMDRMMK 51
MSG ++IFD D ++D ++ ++ E G + + M W +++ ++
Sbjct: 1 MSGFDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNIL-LQVE 59
Query: 52 ELHSQGKTIEDIVE----VLKRIPIHPRVVPAIKSA-HALGCELRIVSDANLFFIETILE 106
S + + + + R+ +++ +K A L I S+++ ++ +L
Sbjct: 60 SEASIPLSASLLDKSEKLLDMRLERDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLT 119
Query: 107 HLGIRDCFSEI 117
+G++ F+
Sbjct: 120 KVGLKPYFAPH 130
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} Length = 226 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 1e-04
Identities = 22/140 (15%), Positives = 43/140 (30%), Gaps = 31/140 (22%)
Query: 1 MSGI-VVIFDFDKTIID-----CDSDNFVVDELGATDLFNQLLPTMPW--------NSLM 46
MS V+FD D T+ D S + +++ + L
Sbjct: 1 MSLYNYVLFDLDGTLTDSAEGITKSVKYSLNKFD--------IQVEDLSSLNKFVGPPLK 52
Query: 47 DRMMKELHSQGKTIEDIVEV---------LKRIPIHPRVVPAIKSAHALGCELRIVSDAN 97
M+ + +T ++ + ++ + + S G L + +
Sbjct: 53 TSFMEYYNFDEETATVAIDYYRDYFKAKGMFENKVYDGIEALLSSLKDYGFHLVVATSKP 112
Query: 98 LFFIETILEHLGIRDCFSEI 117
F + ILEH + F I
Sbjct: 113 TVFSKQILEHFKLAFYFDAI 132
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 1e-04
Identities = 32/146 (21%), Positives = 55/146 (37%), Gaps = 42/146 (28%)
Query: 5 VVIFDFDKTIIDCDSDNFVVDELGA-----------TDL-------FNQLLPTMPWNSLM 46
+++FDFD T+++ + +DE+ T F Q SL
Sbjct: 7 LILFDFDSTLVNNE----TIDEIAREAGVEEEVKKITKEAMEGKLNFEQ--------SLR 54
Query: 47 DR--MMKELHSQGKTIEDIVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETI 104
R ++K IE + + +KRI IK G + +VS + I
Sbjct: 55 KRVSLLK-----DLPIEKVEKAIKRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKI 109
Query: 105 LEHLGIRDCFSEINTNPGFVDEEGRL 130
E LG+ F+ N + ++G+L
Sbjct: 110 KEKLGLDYAFA--NR---LIVKDGKL 130
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 1e-04
Identities = 28/144 (19%), Positives = 46/144 (31%), Gaps = 38/144 (26%)
Query: 5 VVIFDFDKTIIDCDSDNFVVDELGA-----------TDL-------FNQLLPTMPWNSLM 46
++ FD D T I + VDE+ T FN S
Sbjct: 110 IIAFDMDSTFIAEE----GVDEIARELGMSTQITAITQQAMEGKLDFNA--------SFT 157
Query: 47 DRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILE 106
R+ L +G + V R+ + P ++ + A G + I+S F + +
Sbjct: 158 RRIGM-L--KGTPKAVLNAVCDRMTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKA 214
Query: 107 HLGIRDCFSEINTNPGFVDEEGRL 130
+ FS NT + L
Sbjct: 215 RYQLDYAFS--NT---VEIRDNVL 233
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.5 bits (99), Expect = 1e-04
Identities = 45/332 (13%), Positives = 100/332 (30%), Gaps = 84/332 (25%)
Query: 6 VIFDFDKTII---DCDSDNFVVDELGA---TDLFNQLLPTMPWNSLMDRMMKELHSQGK- 58
++ F+ + DC V D + + + ++ + S R+ L S+ +
Sbjct: 21 ILSVFEDAFVDNFDC---KDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEE 77
Query: 59 TIEDIVE---------VLKRIPIHPRVVPAIKSAHALGCELRIVSDANLF---FIETILE 106
++ VE ++ I R P++ + + R+ +D +F + +
Sbjct: 78 MVQKFVEEVLRINYKFLMSPIKTEQRQ-PSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQP 136
Query: 107 HLGIRDCFSEINTNP--------GF---------VDEEGRLRIFPFH----DFTKCSHGC 145
+L +R E+ G F + C+
Sbjct: 137 YLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCN--- 193
Query: 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGD----HVMPRKNF 201
V+E +Q L + + D S + L++ ++ K +
Sbjct: 194 -------SPETVLEMLQ-KLLYQIDPNWTSRSDHSSN--IKLRIHSIQAELRRLLKSKPY 243
Query: 202 PLWDLII----RNPMLIKA--------------EIHEWTDGEELEQILLHLVNTIGSTNN 243
L++ +N A ++ ++ I L + +
Sbjct: 244 EN-CLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISL--DHHSMTLTP 300
Query: 244 NNSAQLLS--ADCKLQTISAAAHETLPQVLSV 273
+ LL DC+ Q + T P+ LS+
Sbjct: 301 DEVKSLLLKYLDCRPQDLPREVLTTNPRRLSI 332
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 40.2 bits (93), Expect = 6e-04
Identities = 47/269 (17%), Positives = 73/269 (27%), Gaps = 72/269 (26%)
Query: 8 FDFD-KTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQ--GKTIEDI- 63
F+ K ++ V D L A + L +L +K L + +D+
Sbjct: 262 FNLSCKILL-TTRFKQVTDFLSAATTTHISLDHHSM-TLTPDEVKSLLLKYLDCRPQDLP 319
Query: 64 VEVLKRIPIHPRVVPAIKSAHALGCELR-----------IVSDANLFFIETILEHLG--- 109
EVL +PR + I +R + D IE+ L L
Sbjct: 320 REVLT---TNPRRLSII------AESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAE 370
Query: 110 IRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLC------PPNMCKGVVIERIQA 163
R F L +FP L + VV + +
Sbjct: 371 YRKMFDR-------------LSVFP--PSAHIPTIL-LSLIWFDVIKSDVMVVVNKLHKY 414
Query: 164 SLSKEGNKK-IIYLGDGSGDYCPSLKLSEG------DHVMPRKNFPLWDLIIRNPM---- 212
SL ++ K+ I + + L+ DH K F DLI +
Sbjct: 415 SLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIP-PYLDQYF 473
Query: 213 -------LIKAEIHEWTDGEELEQILLHL 234
L E E + L
Sbjct: 474 YSHIGHHLKNIEHPE--RMTLFRMVFLDF 500
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} Length = 233 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 1e-04
Identities = 21/136 (15%), Positives = 42/136 (30%), Gaps = 28/136 (20%)
Query: 6 VIFDFDKTIIDCDSDNF-------VVDELGAT---DLFNQL--LPTMP-WNSLMDRMMKE 52
VIFD D I D + + + +++ D+ +L + S++ E
Sbjct: 5 VIFDLDGVITD--TAEYHFLAWKHIAEQIDIPFDRDMNERLKGISREESLESILIFGGAE 62
Query: 53 LHSQGKTIE-----------DIVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFI 101
+ ++ L + P + + ++ + S +
Sbjct: 63 TKYTNAEKQELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRN--A 120
Query: 102 ETILEHLGIRDCFSEI 117
IL L I D F I
Sbjct: 121 PKILRRLAIIDDFHAI 136
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A Length = 259 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 1e-04
Identities = 14/136 (10%), Positives = 38/136 (27%), Gaps = 34/136 (25%)
Query: 6 VIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVE 65
V+FD D +++ S+ + + + + + G+ + ++
Sbjct: 31 VLFDLDGVLVE--SEGIIAQVW--QSVLAERGLHLDLTEIAMYFT------GQRFDGVLA 80
Query: 66 VLKR------------------------IPIHPRVVPAIKSAHALGCELRIVSDANLFFI 101
L + + +++ A G I S++ +
Sbjct: 81 YLAQQHDFVPPPDFLDVLETRFNAAMTGVTAIEGAAETLRALRAAGVPFAIGSNSERGRL 140
Query: 102 ETILEHLGIRDCFSEI 117
L G+ + E
Sbjct: 141 HLKLRVAGLTELAGEH 156
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 2e-04
Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 16/133 (12%)
Query: 5 VVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRM--MKELHS-----QG 57
+++FD D T++ + V++ L A + + ++ + + L G
Sbjct: 187 LIVFDVDSTLVQGE----VIEMLAAKAGAEGQVAAITDAAMRGELDFAQSLQQRVATLAG 242
Query: 58 KTIEDIVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEI 117
I EV ++ + P +++ LG +VS IE + E L + +
Sbjct: 243 LPATVIDEVAGQLELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAA-- 300
Query: 118 NTNPGFVDEEGRL 130
N +G L
Sbjct: 301 NE---LEIVDGTL 310
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} Length = 250 | Back alignment and structure |
|---|
Score = 40.0 bits (94), Expect = 4e-04
Identities = 16/129 (12%), Positives = 39/129 (30%), Gaps = 19/129 (14%)
Query: 6 VIFDFDKTIID-----CDSDNFVVDELGAT---DLFNQLLPTMPWNSLMDRMMKELHSQG 57
+IFD D ++D + + D+ + ++ + +++ ++
Sbjct: 33 LIFDMDGLLLDTERLYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAA--QIIIDVLQLP 90
Query: 58 KTIEDIV--------EVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHL- 108
+ E++V EV + P I G + + + +
Sbjct: 91 MSKEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHK 150
Query: 109 GIRDCFSEI 117
FS I
Sbjct: 151 EFFSLFSHI 159
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231 | Back alignment and structure |
|---|
Score = 39.6 bits (93), Expect = 5e-04
Identities = 23/138 (16%), Positives = 48/138 (34%), Gaps = 31/138 (22%)
Query: 1 MSGI-VVIFDFDKTIIDCDSD------NFVVDELGATDLFNQLLPTMP----WNSLMDRM 49
M VIFD+ T+ID + V+D++G + NS + +
Sbjct: 22 MKQPTAVIFDWYNTLIDTSINIDRTTFYQVLDQMG--------YKNIDLDSIPNSTIPKY 73
Query: 50 MKELHSQGKTIEDIVEVLKR----------IPIHPRVVPAIKSAHALGCELRIVSDANLF 99
+ L GK ++ + + ++ + + + + IVS+ N
Sbjct: 74 LITLL--GKRWKEATILYENSLEKSQKSDNFMLNDGAIELLDTLKENNITMAIVSNKNGE 131
Query: 100 FIETILEHLGIRDCFSEI 117
+ + + H + F I
Sbjct: 132 RLRSEIHHKNLTHYFDSI 149
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A Length = 243 | Back alignment and structure |
|---|
Score = 39.6 bits (93), Expect = 5e-04
Identities = 15/132 (11%), Positives = 38/132 (28%), Gaps = 22/132 (16%)
Query: 6 VIFDFDKTIIDCDSDNFVV-------DELG--ATDLFNQLLPTMPWNSLMDRMMKELHSQ 56
V+FD D + +S + G + + S ++ + + +
Sbjct: 27 VLFDMDGVLF--NSMPYHSEAWHQVMKTHGLDLSREEAYMHEGRTGASTINIVFQRELGK 84
Query: 57 GKTIEDIVEVLKR----------IPIHPRVVPAIKSAHALGCELRIVSDA-NLFFIETIL 105
T E+I + P ++ + G +V+ + L +E +
Sbjct: 85 EATQEEIESIYHEKSILFNSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLE 144
Query: 106 EHLGIRDCFSEI 117
+ +
Sbjct: 145 HNFPGMFHKELM 156
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} Length = 240 | Back alignment and structure |
|---|
Score = 39.1 bits (92), Expect = 6e-04
Identities = 25/129 (19%), Positives = 46/129 (35%), Gaps = 19/129 (14%)
Query: 5 VVIFDFDKTIID-----CDSDNFVVDELGATDLFNQLLPTMPW--NSLMDRMMKELHSQG 57
+V+FD D T+ D S + ++ G + L + L D + +
Sbjct: 31 IVLFDLDGTLTDPKEGITKSIQYSLNSFGIKEDLENLDQ---FIGPPLHDTFKEYYKFED 87
Query: 58 KTIEDIVEV---------LKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHL 108
K ++ VE + I+ + ++ + G L + + F ETIL +
Sbjct: 88 KKAKEAVEKYREYFADKGIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYF 147
Query: 109 GIRDCFSEI 117
I F I
Sbjct: 148 DIDRYFKYI 156
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} Length = 231 | Back alignment and structure |
|---|
Score = 39.0 bits (90), Expect = 7e-04
Identities = 25/128 (19%), Positives = 44/128 (34%), Gaps = 20/128 (15%)
Query: 5 VVIFDFDKTIID-----CDSDNFVVDELG---------ATDLFNQLLPTMPWNSLMDRMM 50
V +FD D T++D D ++ E G + L + + R
Sbjct: 13 VFLFDCDNTLLDNDHVLADLRAHMMREFGAQNSARYWEIFETLRTELGYADYLGALQR-Y 71
Query: 51 KELHSQGKTIEDIVEVLKRIPIHPRVVP----AIKSAHALGCELRIVSDANLFFIETILE 106
+ + + + L P RV P A++ A G I+SD ++ F +
Sbjct: 72 RLEQPRDTRLLLMSSFLIDYPFASRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIA 130
Query: 107 HLGIRDCF 114
G+ D
Sbjct: 131 RSGLWDEV 138
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 38.8 bits (91), Expect = 7e-04
Identities = 22/150 (14%), Positives = 41/150 (27%), Gaps = 42/150 (28%)
Query: 6 VIFDFDKTIIDCDSDNFVVDELGATDL-----------------------FNQLLPTMPW 42
+IFDFD T+I + ++ + L F
Sbjct: 7 IIFDFDSTLIKKE----SLELILEPILQKSPAKLKEIEYITNLGMQGDISFRD------- 55
Query: 43 NSLMDR--MMKELHSQGKTIEDIVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFF 100
SL R + I++ + + ++ G E+ I S
Sbjct: 56 -SLQKRLAIASPTKQS---IKEFSNKYCPNLLTDGIKELVQDLKNKGFEIWIFSGGLSES 111
Query: 101 IETILEHLGIRDCFSEINTNPGFVDEEGRL 130
I+ ++L I I + +G
Sbjct: 112 IQPFADYLNIP--RENIFAVETIWNSDGSF 139
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 Length = 190 | Back alignment and structure |
|---|
Score = 38.3 bits (90), Expect = 8e-04
Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 15/123 (12%)
Query: 6 VIFDFDKTIID-----CDSDNFVVDELGATDLFNQLLPTM--PWNSLMDRMMKELHSQGK 58
I+D T++D + + G T + + + ++ L
Sbjct: 9 YIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVSTPFAIETFAPNL---EN 65
Query: 59 TIEDIVEVLKRIPIHPR----VVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCF 114
+E E R HP V ++ G +VS N +E ILE I F
Sbjct: 66 FLEKYKENEARELEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVLE-ILEKTSIAAYF 124
Query: 115 SEI 117
+E+
Sbjct: 125 TEV 127
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 275 | |||
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.93 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 99.91 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 99.91 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 99.9 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.89 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 99.89 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 99.89 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 99.89 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.89 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 99.88 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 99.88 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 99.88 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 99.88 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 99.88 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 99.88 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.87 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 99.87 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 99.87 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.87 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 99.87 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 99.86 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.86 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 99.86 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.86 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 99.86 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 99.86 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.85 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 99.85 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 99.85 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 99.85 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.85 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 99.85 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 99.85 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 99.85 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 99.85 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 99.84 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 99.84 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 99.84 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 99.84 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 99.84 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 99.84 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 99.84 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 99.84 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 99.83 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 99.83 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 99.83 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 99.83 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 99.83 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 99.82 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.82 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 99.82 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.82 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 99.82 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 99.81 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 99.81 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 99.81 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 99.81 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 99.81 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.81 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.8 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 99.8 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 99.8 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.8 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 99.8 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 99.8 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.8 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 99.79 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 99.78 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.77 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 99.76 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.75 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 99.75 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 99.74 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 99.73 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.72 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 99.7 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 99.7 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 99.66 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.65 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 99.64 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 99.62 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 99.62 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 99.61 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 99.6 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.6 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.59 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.59 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.57 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 99.57 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 99.56 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.56 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.54 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.54 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.53 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.53 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 99.51 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.5 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.49 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.48 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.18 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 99.44 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.42 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 99.42 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.4 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.4 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 99.4 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 99.39 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.38 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.36 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.35 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.33 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.33 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.32 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.32 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.3 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 99.29 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 99.29 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.29 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.28 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.28 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 99.28 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.26 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 99.23 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 99.22 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 99.14 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 99.09 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.08 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.07 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.06 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.04 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.03 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.02 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 98.98 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.87 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.71 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.58 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 98.58 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.43 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 98.39 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.32 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 98.3 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.28 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.22 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 98.2 | |
| 3qle_A | 204 | TIM50P; chaperone, mitochondrion, preprotein trans | 98.15 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 98.14 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 98.13 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 98.12 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 98.11 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 98.1 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.08 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 97.97 | |
| 3ef0_A | 372 | RNA polymerase II subunit A C-terminal domain phos | 97.95 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 97.77 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 97.72 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 97.64 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 97.53 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 97.51 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 97.46 | |
| 4g63_A | 470 | Cytosolic IMP-GMP specific 5'-nucleotidase; struct | 97.42 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 97.31 | |
| 3shq_A | 320 | UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila | 97.26 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 96.51 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 95.97 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 95.84 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 95.58 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 95.5 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 95.32 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 94.77 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 93.73 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 92.14 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 91.96 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 91.0 | |
| 3ef1_A | 442 | RNA polymerase II subunit A C-terminal domain phos | 90.66 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 90.47 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 89.86 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 89.56 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 89.2 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 88.83 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 88.59 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 88.2 | |
| 3geb_A | 274 | EYES absent homolog 2; hydrolase, activator, alter | 87.8 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 86.44 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 86.38 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 85.46 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 83.13 |
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=99.93 E-value=3e-25 Score=182.72 Aligned_cols=199 Identities=14% Similarity=0.128 Sum_probs=140.8
Q ss_pred ceEEEEEcCCcccCCcc-----HHHHHHHhCCChH--HHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHH---------H
Q 044553 3 GIVVIFDFDKTIIDCDS-----DNFVVDELGATDL--FNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVE---------V 66 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~ 66 (275)
+|+|+||+||||+|+.. +..+++++|.+.. ......+................ ....+.+.. .
T Consensus 1 IkAViFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 79 (216)
T 3kbb_A 1 MEAVIFDMDGVLMDTEPLYFEAYRRVAESYGKPYTEDLHRRIMGVPEREGLPILMEALEI-KDSLENFKKRVHEEKKRVF 79 (216)
T ss_dssp CCEEEEESBTTTBCCGGGHHHHHHHHHHHTTCCCCHHHHHHHTTSCHHHHHHHHHHHTTC-CSCHHHHHHHHHHHHHHHH
T ss_pred CeEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHhccchhhhhhhhhhcccc-hhhHHHHHHHHHHHHHHHH
Confidence 47999999999999865 3567788887522 22222233334444433333221 222332211 2
Q ss_pred HhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCC
Q 044553 67 LKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCN 146 (275)
Q Consensus 67 ~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~ 146 (275)
.....++||+.++++.|+++|++++|+||++...+...++.+|+.++||.+++++... ..||+|
T Consensus 80 ~~~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~~~~~~------~~KP~p---------- 143 (216)
T 3kbb_A 80 SELLKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVK------NGKPDP---------- 143 (216)
T ss_dssp HHHCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGSS------SCTTST----------
T ss_pred HHhcccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccccccccccC------CCcccH----------
Confidence 2447899999999999999999999999999999999999999999999999876532 457766
Q ss_pred cCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchh-hHHHhhCCCceeEEEeeCCChH
Q 044553 147 LCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPL-WDLIIRNPMLIKAEIHEWTDGE 225 (275)
Q Consensus 147 ~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~ 225 (275)
++++.++.+++.. |++|+||||+.+|+.+|+++|+..++....++.. ..+..... . ...++.
T Consensus 144 ---------~~~~~a~~~lg~~-p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~-~------~i~~~~ 206 (216)
T 3kbb_A 144 ---------EIYLLVLERLNVV-PEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGA-V------ALVKPE 206 (216)
T ss_dssp ---------HHHHHHHHHHTCC-GGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTC-S------EEECGG
T ss_pred ---------HHHHHHHHhhCCC-ccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCC-c------EECCHH
Confidence 6777888888765 5899999999999999999999887655555433 33333222 1 234678
Q ss_pred HHHHHHHHHH
Q 044553 226 ELEQILLHLV 235 (275)
Q Consensus 226 el~~~l~~~~ 235 (275)
+|.+.|++++
T Consensus 207 eli~~l~eLL 216 (216)
T 3kbb_A 207 EILNVLKEVL 216 (216)
T ss_dssp GHHHHHHHHC
T ss_pred HHHHHHHHHC
Confidence 8988888763
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-23 Score=175.34 Aligned_cols=204 Identities=10% Similarity=0.017 Sum_probs=145.4
Q ss_pred CceEEEEEcCCcccCCcc-----HHHHHHHhCCChHHHhh--cCCCChHHHHHHHHHHHHhCCCCHHHHHHH-------H
Q 044553 2 SGIVVIFDFDKTIIDCDS-----DNFVVDELGATDLFNQL--LPTMPWNSLMDRMMKELHSQGKTIEDIVEV-------L 67 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 67 (275)
++|+|+||+||||+++.. +..+++.+|.+...... ..+......+..++........+.+.+... +
T Consensus 22 ~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (247)
T 3dv9_A 22 DLKAVLFDMDGVLFDSMPNHAESWHKIMKRFGFGLSREEAYMHEGRTGASTINIVSRRERGHDATEEEIKAIYQAKTEEF 101 (247)
T ss_dssp CCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHTTTSCHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCccCcCHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCChHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 479999999999999864 35677788876432221 223344444555555544444454443322 2
Q ss_pred ---hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCc--ceEecCCCccCCCCceeecccCCCCCCC
Q 044553 68 ---KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCF--SEINTNPGFVDEEGRLRIFPFHDFTKCS 142 (275)
Q Consensus 68 ---~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~f--d~i~~~~~~~~~~g~~~~kp~~~~~~~~ 142 (275)
....++||+.++|+.|+++|++++|+||+....+...+++ |+..+| +.+++++... .+||.
T Consensus 102 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~------~~kp~------- 167 (247)
T 3dv9_A 102 NKCPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVK------YGKPN------- 167 (247)
T ss_dssp TTSCCCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCS------SCTTS-------
T ss_pred HhcccCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCC------CCCCC-------
Confidence 2368899999999999999999999999999989999999 999999 8888766431 34553
Q ss_pred CCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCC
Q 044553 143 HGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWT 222 (275)
Q Consensus 143 ~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 222 (275)
+.+++.++..++.. +++|++|||+.+|+.+|+.+|...+++..+......+....+ ...++
T Consensus 168 ------------~~~~~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a------d~v~~ 228 (247)
T 3dv9_A 168 ------------PEPYLMALKKGGFK-PNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGA------NLLFH 228 (247)
T ss_dssp ------------SHHHHHHHHHHTCC-GGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTC------SEEES
T ss_pred ------------CHHHHHHHHHcCCC-hhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCC------CEEEC
Confidence 47888888888765 589999999999999999988876766655444444333222 23679
Q ss_pred ChHHHHHHHHHHHHHh
Q 044553 223 DGEELEQILLHLVNTI 238 (275)
Q Consensus 223 ~~~el~~~l~~~~~~~ 238 (275)
++.||.++|+++++..
T Consensus 229 ~~~el~~~l~~~~~~~ 244 (247)
T 3dv9_A 229 SMPDFNKNWETLQSAL 244 (247)
T ss_dssp SHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHh
Confidence 9999999999988654
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-23 Score=176.32 Aligned_cols=200 Identities=11% Similarity=-0.002 Sum_probs=145.2
Q ss_pred CceEEEEEcCCcccCCcc-----HHHHHHHhCCChHHHhh--cCCCChHHHHHHHHHHHHhCCCCHHHHHHH-------H
Q 044553 2 SGIVVIFDFDKTIIDCDS-----DNFVVDELGATDLFNQL--LPTMPWNSLMDRMMKELHSQGKTIEDIVEV-------L 67 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 67 (275)
++|+|+||+||||+++.. +..+++.+|.+...... ..+......+...+........+.+++... +
T Consensus 23 ~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (243)
T 3qxg_A 23 KLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAYMHEGRTGASTINIVFQRELGKEATQEEIESIYHEKSILF 102 (243)
T ss_dssp CCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHTTTSCHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHH
T ss_pred cCCEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHhCCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence 479999999999999964 46677788876432221 123334444555555444444454443322 1
Q ss_pred ---hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCc--ceEecCCCccCCCCceeecccCCCCCCC
Q 044553 68 ---KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCF--SEINTNPGFVDEEGRLRIFPFHDFTKCS 142 (275)
Q Consensus 68 ---~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~f--d~i~~~~~~~~~~g~~~~kp~~~~~~~~ 142 (275)
....++||+.++|+.|+++|++++|+||+....+...++. |+..+| +.+++++... .+||.
T Consensus 103 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~------~~kp~------- 168 (243)
T 3qxg_A 103 NSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVK------YGKPN------- 168 (243)
T ss_dssp HTSSCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCS------SCTTS-------
T ss_pred HhcccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCC------CCCCC-------
Confidence 2367999999999999999999999999998889999999 999999 8888776531 34554
Q ss_pred CCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCC
Q 044553 143 HGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWT 222 (275)
Q Consensus 143 ~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 222 (275)
..+++.++..++.. +++|++|||+.+|+.+|+.+|...+++..+......+....+ ...++
T Consensus 169 ------------~~~~~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a------d~v~~ 229 (243)
T 3qxg_A 169 ------------PEPYLMALKKGGLK-ADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGA------DLLFP 229 (243)
T ss_dssp ------------SHHHHHHHHHTTCC-GGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTC------SEEES
T ss_pred ------------hHHHHHHHHHcCCC-HHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCC------CEEEC
Confidence 47888888888765 589999999999999999999877766655444444433332 22679
Q ss_pred ChHHHHHHHHHH
Q 044553 223 DGEELEQILLHL 234 (275)
Q Consensus 223 ~~~el~~~l~~~ 234 (275)
++.||.++|+++
T Consensus 230 s~~el~~~l~~l 241 (243)
T 3qxg_A 230 SMQTLCDSWDTI 241 (243)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHhh
Confidence 999999988876
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.7e-23 Score=173.34 Aligned_cols=198 Identities=17% Similarity=0.151 Sum_probs=134.8
Q ss_pred CCceEEEEEcCCcccCCcc-----HHHHHHHhCCC--hH---HHhhcCCCChHHHHHHHHHHHH----------------
Q 044553 1 MSGIVVIFDFDKTIIDCDS-----DNFVVDELGAT--DL---FNQLLPTMPWNSLMDRMMKELH---------------- 54 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~--~~---~~~~~~~~~~~~~~~~~~~~~~---------------- 54 (275)
|++++|+||+||||+|+.. +..+++.+|.+ .. ..... +......++.......
T Consensus 2 M~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (240)
T 2hi0_A 2 MKYKAAIFDMDGTILDTSADLTSALNYAFEQTGHRHDFTVEDIKNFF-GSGVVVAVTRALAYEAGSSRESLVAFGTKDEQ 80 (240)
T ss_dssp CSCSEEEECSBTTTEECHHHHHHHHHHHHHHTTSCCCCCHHHHHHHC-SSCHHHHHHHHHHHHTTCCHHHHTTTTSTTCC
T ss_pred CcccEEEEecCCCCccCHHHHHHHHHHHHHHcCCCCCCCHHHHHHhc-CccHHHHHHHHHHhcccccccccccccccccc
Confidence 6789999999999999965 35677788875 11 12222 2333333333321100
Q ss_pred -hCCCCHHH-------HHHHH-----hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCC
Q 044553 55 -SQGKTIED-------IVEVL-----KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNP 121 (275)
Q Consensus 55 -~~~~~~~~-------~~~~~-----~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~ 121 (275)
....+.+. +.+.+ ....++||+.++|+.|+++|++++|+||++...++..++++|+. +|+.+++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~~~~~~~ 159 (240)
T 2hi0_A 81 IPEAVTQTEVNRVLEVFKPYYADHCQIKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFDFALGEK 159 (240)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHTSSSSCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCSEEEEEC
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHhhhhcCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-ceeEEEecC
Confidence 01122222 12221 23568999999999999999999999999999999999999998 999998876
Q ss_pred CccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCc
Q 044553 122 GFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNF 201 (275)
Q Consensus 122 ~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~ 201 (275)
... ..||.| .++..++..++.. |++|+|||||.+|+.+|+++|...+++..+..
T Consensus 160 ~~~------~~Kp~p-------------------~~~~~~~~~l~~~-~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~ 213 (240)
T 2hi0_A 160 SGI------RRKPAP-------------------DMTSECVKVLGVP-RDKCVYIGDSEIDIQTARNSEMDEIAVNWGFR 213 (240)
T ss_dssp TTS------CCTTSS-------------------HHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEESSSSS
T ss_pred CCC------CCCCCH-------------------HHHHHHHHHcCCC-HHHeEEEcCCHHHHHHHHHCCCeEEEECCCCC
Confidence 421 346644 7788888888765 58999999999999999998887666654332
Q ss_pred hhhHHHhhCCCceeEEEeeCCChHHHHHHHH
Q 044553 202 PLWDLIIRNPMLIKAEIHEWTDGEELEQILL 232 (275)
Q Consensus 202 ~~~~l~~~~~~~~~~~~~~~~~~~el~~~l~ 232 (275)
...++....+ ...++++.||..++.
T Consensus 214 ~~~~~~~~~a------~~~~~~~~el~~~l~ 238 (240)
T 2hi0_A 214 SVPFLQKHGA------TVIVDTAEKLEEAIL 238 (240)
T ss_dssp CHHHHHHTTC------CCEECSHHHHHHHHH
T ss_pred chhHHHhcCC------CEEECCHHHHHHHhc
Confidence 2233332222 225689999887663
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.89 E-value=4.6e-23 Score=170.24 Aligned_cols=196 Identities=18% Similarity=0.132 Sum_probs=138.9
Q ss_pred CC-ceEEEEEcCCcccCCcc-----HHHHHHHhCCChHHH---hhcCCCChHHHHHHHHHHHHhCCCCHHH-------HH
Q 044553 1 MS-GIVVIFDFDKTIIDCDS-----DNFVVDELGATDLFN---QLLPTMPWNSLMDRMMKELHSQGKTIED-------IV 64 (275)
Q Consensus 1 m~-~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 64 (275)
|+ +|+|+||+||||+++.. +..+++++|.+.... ....+......+...+ +.+.+. +.
T Consensus 1 M~m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~ 74 (226)
T 3mc1_A 1 MSLYNYVLFDLDGTLTDSAEGITKSVKYSLNKFDIQVEDLSSLNKFVGPPLKTSFMEYY------NFDEETATVAIDYYR 74 (226)
T ss_dssp -CCCCEEEECSBTTTBCCHHHHHHHHHHHHHTTTCCCSCGGGGGGGSSSCHHHHHHHHH------CCCHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCccccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhCcCHHHHHHHHh------CCCHHHHHHHHHHHH
Confidence 53 79999999999999965 355677777753211 1111223333322221 222222 12
Q ss_pred HHH-----hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCC
Q 044553 65 EVL-----KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFT 139 (275)
Q Consensus 65 ~~~-----~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~ 139 (275)
..+ ....++||+.++|+.|+++|++++|+||+....++..++.+|+..+|+.+++.+... .+||
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------~~kp----- 143 (226)
T 3mc1_A 75 DYFKAKGMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDG------KLST----- 143 (226)
T ss_dssp HHHTTTGGGSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTS------SSCS-----
T ss_pred HHHHHhCcccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCCC------CCCC-----
Confidence 222 236899999999999999999999999999999999999999999999998766431 2333
Q ss_pred CCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEe
Q 044553 140 KCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIH 219 (275)
Q Consensus 140 ~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 219 (275)
|+.+++.++..++.. +++|++|||+.+|+.+|+.+|...+++..+......+....+ ..
T Consensus 144 --------------~~~~~~~~~~~lgi~-~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~a------d~ 202 (226)
T 3mc1_A 144 --------------KEDVIRYAMESLNIK-SDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGA------NY 202 (226)
T ss_dssp --------------HHHHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTC------SE
T ss_pred --------------CHHHHHHHHHHhCcC-cccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCC------CE
Confidence 678999999998876 479999999999999999999877777655444444433332 22
Q ss_pred eCCChHHHHHHHHHH
Q 044553 220 EWTDGEELEQILLHL 234 (275)
Q Consensus 220 ~~~~~~el~~~l~~~ 234 (275)
..+++.||.+++.+.
T Consensus 203 v~~s~~el~~~~~~~ 217 (226)
T 3mc1_A 203 IVNSVDELHKKILEL 217 (226)
T ss_dssp EESSHHHHHHHHHTC
T ss_pred EECCHHHHHHHHHHH
Confidence 578999999887743
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.89 E-value=2.3e-23 Score=171.18 Aligned_cols=190 Identities=16% Similarity=0.172 Sum_probs=129.8
Q ss_pred CCceEEEEEcCCcccCCcc-----HHHHHHHhCCChH----HHhhcCCCChHHHHHHHHHHHHhCCCCHHH----HHHH-
Q 044553 1 MSGIVVIFDFDKTIIDCDS-----DNFVVDELGATDL----FNQLLPTMPWNSLMDRMMKELHSQGKTIED----IVEV- 66 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~- 66 (275)
|++++|+||+||||+|+.. +..+++++|.+.. ..... +......+... +. ....++ +.+.
T Consensus 2 M~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-g~~~~~~~~~~---~~--~~~~~~~~~~~~~~~ 75 (210)
T 2ah5_A 2 TSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFM-GPPLESSFATC---LS--KDQISEAVQIYRSYY 75 (210)
T ss_dssp TTCCEEEECSBTTTEECHHHHHHHHHHHHHHHTCCCCCHHHHHHTS-SSCHHHHHHTT---SC--GGGHHHHHHHHHHHH
T ss_pred CCCCEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHc-CccHHHHHHHH---cC--HHHHHHHHHHHHHHH
Confidence 3479999999999999965 3566778886531 11222 22222222111 00 001112 1111
Q ss_pred ----HhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCC
Q 044553 67 ----LKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCS 142 (275)
Q Consensus 67 ----~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~ 142 (275)
.....++||+.++|+.|++ |++++|+||++...++..++++|+..+|+.+++++ . ..||
T Consensus 76 ~~~~~~~~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~-~-------~~Kp-------- 138 (210)
T 2ah5_A 76 KAKGIYEAQLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSS-P-------EAPH-------- 138 (210)
T ss_dssp HHTGGGSCEECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEEC-S-------SCCS--------
T ss_pred HHhccCCCCCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheeeeecCC-C-------CCCC--------
Confidence 1236789999999999999 99999999999999999999999999999998765 1 3455
Q ss_pred CCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCC
Q 044553 143 HGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWT 222 (275)
Q Consensus 143 ~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 222 (275)
|+.++..++..++.. |++|+|||||.+|+.+|+++|...+++..+.....++....+ ...++
T Consensus 139 -----------~p~~~~~~~~~lg~~-p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a------~~v~~ 200 (210)
T 2ah5_A 139 -----------KADVIHQALQTHQLA-PEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQP------DYIAH 200 (210)
T ss_dssp -----------HHHHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCC------SEEES
T ss_pred -----------ChHHHHHHHHHcCCC-cccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCC------CEEEC
Confidence 557888888888766 589999999999999999999876666543322333322222 12568
Q ss_pred ChHHHHHHH
Q 044553 223 DGEELEQIL 231 (275)
Q Consensus 223 ~~~el~~~l 231 (275)
++.||.+++
T Consensus 201 ~~~el~~~l 209 (210)
T 2ah5_A 201 KPLEVLAYF 209 (210)
T ss_dssp STTHHHHHT
T ss_pred CHHHHHHHh
Confidence 888887653
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-23 Score=177.04 Aligned_cols=171 Identities=18% Similarity=0.148 Sum_probs=123.2
Q ss_pred CCceEEEEEcCCcccCCcc-----HHHHHHHhCCCh--HHHhhcCCCChHHHHHHHHHHHHhC-CCCHHHH---------
Q 044553 1 MSGIVVIFDFDKTIIDCDS-----DNFVVDELGATD--LFNQLLPTMPWNSLMDRMMKELHSQ-GKTIEDI--------- 63 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--------- 63 (275)
|++|+|+||+||||+|+.. +..+++++|++. .......+......++.++...... .....+.
T Consensus 3 MkiKaViFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (243)
T 4g9b_A 3 MKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHGGKEGDFNSQERAQLAYRKNL 82 (243)
T ss_dssp CCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCTTGGGGGTTCCHHHHHHHHHHHTTCGGGCCHHHHHHHHHHHHH
T ss_pred ccCcEEEEcCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHHhhcccchhHHHHHHHHHHHHH
Confidence 4579999999999999865 366788888752 2223333444555555554433211 1121111
Q ss_pred --HHHHh---cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCC
Q 044553 64 --VEVLK---RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDF 138 (275)
Q Consensus 64 --~~~~~---~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~ 138 (275)
..... ...++||+.++++.|+++|++++++||+.. ...+++++|+..+|+.|++++... ..||+|
T Consensus 83 ~~~~~~~~~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~fd~i~~~~~~~------~~KP~p-- 152 (243)
T 4g9b_A 83 LYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFFTFCADASQLK------NSKPDP-- 152 (243)
T ss_dssp HHHHHHHTCCGGGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGCSEECCGGGCS------SCTTST--
T ss_pred HHHHHHHhcccccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcccccccccccccc------CCCCcH--
Confidence 11111 235899999999999999999999999754 577899999999999999877642 468877
Q ss_pred CCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 139 TKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 139 ~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
+++...+.+++.. |++|+||||+.+|+.+|+++|...+++..+
T Consensus 153 -----------------~~~~~a~~~lg~~-p~e~l~VgDs~~di~aA~~aG~~~I~V~~g 195 (243)
T 4g9b_A 153 -----------------EIFLAACAGLGVP-PQACIGIEDAQAGIDAINASGMRSVGIGAG 195 (243)
T ss_dssp -----------------HHHHHHHHHHTSC-GGGEEEEESSHHHHHHHHHHTCEEEEESTT
T ss_pred -----------------HHHHHHHHHcCCC-hHHEEEEcCCHHHHHHHHHcCCEEEEECCC
Confidence 6777777777765 589999999999999999999987776543
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.6e-23 Score=172.56 Aligned_cols=194 Identities=15% Similarity=0.205 Sum_probs=135.6
Q ss_pred CceEEEEEcCCcccCCc-----cH-HHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHh------c
Q 044553 2 SGIVVIFDFDKTIIDCD-----SD-NFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLK------R 69 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~-----~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 69 (275)
++++|+||+||||++++ .+ ..+++.+|.+........+......+...+.... ....+.+...+. .
T Consensus 24 ~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 101 (231)
T 3kzx_A 24 QPTAVIFDWYNTLIDTSINIDRTTFYQVLDQMGYKNIDLDSIPNSTIPKYLITLLGKRW--KEATILYENSLEKSQKSDN 101 (231)
T ss_dssp CCSEEEECTBTTTEETTSSCCHHHHHHHHHHTTCCCCCCTTSCTTTHHHHHHHHHGGGH--HHHHHHHHHHHHHCCSCCC
T ss_pred CCCEEEECCCCCCcCCchhHHHHHHHHHHHHcCCCHHHHHHHhCccHHHHHHHHhCchH--HHHHHHHHHHHhhhccccc
Confidence 47999999999999987 34 6778888876421111222222333322221100 000122233333 4
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCP 149 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~ 149 (275)
..++||+.++|+.|+++|++++|+||+....++..++.+|+..+|+.+++.+... ..||.
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~------~~Kp~-------------- 161 (231)
T 3kzx_A 102 FMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTG------TIKPS-------------- 161 (231)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEETSSS------CCTTS--------------
T ss_pred ceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEcccccC------CCCCC--------------
Confidence 6789999999999999999999999999999999999999999999998866431 34554
Q ss_pred CCCchHHHHHHHHHhhhcCCCC-eEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHH
Q 044553 150 PNMCKGVVIERIQASLSKEGNK-KIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELE 228 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~-~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~ 228 (275)
...++.++..++.. ++ ++++|||+.+|+.+|+.+|...+++..... . .+ ...++++.||.
T Consensus 162 -----~~~~~~~~~~lgi~-~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~-------~-----~~-~~~~~~~~el~ 222 (231)
T 3kzx_A 162 -----PEPVLAALTNINIE-PSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI-------I-----KD-ILSFKNFYDIR 222 (231)
T ss_dssp -----SHHHHHHHHHHTCC-CSTTEEEEESSHHHHHHHHHTTCEEEEECC-----------------C-CEEESSHHHHH
T ss_pred -----hHHHHHHHHHcCCC-cccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC-------C-----CC-ceeeCCHHHHH
Confidence 47888888888776 46 899999999999999998876666532211 0 11 23689999999
Q ss_pred HHHHHHHH
Q 044553 229 QILLHLVN 236 (275)
Q Consensus 229 ~~l~~~~~ 236 (275)
++|.++++
T Consensus 223 ~~l~~~l~ 230 (231)
T 3kzx_A 223 NFICQLIN 230 (231)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhc
Confidence 99988763
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=99.88 E-value=2.6e-22 Score=169.59 Aligned_cols=200 Identities=13% Similarity=0.089 Sum_probs=143.9
Q ss_pred CceEEEEEcCCcccCCcc-----HHHHHHHhCCChHH---HhhcCCCChHHHHHHHHHHHHhCCCC---HHHH----HHH
Q 044553 2 SGIVVIFDFDKTIIDCDS-----DNFVVDELGATDLF---NQLLPTMPWNSLMDRMMKELHSQGKT---IEDI----VEV 66 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----~~~ 66 (275)
++++|+||+||||+++.. +..+++++|.+... .....+.......+.+...... ... .+.+ .+.
T Consensus 27 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 105 (259)
T 4eek_A 27 PFDAVLFDLDGVLVESEGIIAQVWQSVLAERGLHLDLTEIAMYFTGQRFDGVLAYLAQQHDF-VPPPDFLDVLETRFNAA 105 (259)
T ss_dssp CCSEEEEESBTTTEECHHHHHHHHHHHHHHTTCCCCHHHHHHHTTTCCHHHHHHHHHHHHCC-CCCTTHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCcccCHHHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHHH
Confidence 579999999999999864 35677788876322 2223334455555555444321 222 1222 222
Q ss_pred HhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcce-EecCCCccCCCCceeecccCCCCCCCCCC
Q 044553 67 LKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSE-INTNPGFVDEEGRLRIFPFHDFTKCSHGC 145 (275)
Q Consensus 67 ~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~-i~~~~~~~~~~g~~~~kp~~~~~~~~~~~ 145 (275)
+....++||+.++|+.|+++|++++|+||+....++..++.+|+..+|+. +++.+... ...||
T Consensus 106 ~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~i~~~~~~~-----~~~Kp----------- 169 (259)
T 4eek_A 106 MTGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYDPSWVG-----GRGKP----------- 169 (259)
T ss_dssp HTTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSCEECGGGGT-----TCCTT-----------
T ss_pred hccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccceEEeHhhcC-----cCCCC-----------
Confidence 35688999999999999999999999999999999999999999999998 88765320 02354
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCch----hhHHHhhCCCceeEEEeeC
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFP----LWDLIIRNPMLIKAEIHEW 221 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~~~~ 221 (275)
|..+++.++..++.. +++|++|||+.+|+.+|+.+|...+++.+++.. ...+....+ ...+
T Consensus 170 --------~~~~~~~~~~~lgi~-~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~a------d~vi 234 (259)
T 4eek_A 170 --------HPDLYTFAAQQLGIL-PERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGA------ARVL 234 (259)
T ss_dssp --------SSHHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTC------SEEE
T ss_pred --------ChHHHHHHHHHcCCC-HHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCc------chhh
Confidence 347888888888776 589999999999999999999877777655443 333433332 2357
Q ss_pred CChHHHHHHHHH
Q 044553 222 TDGEELEQILLH 233 (275)
Q Consensus 222 ~~~~el~~~l~~ 233 (275)
+++.||.++|++
T Consensus 235 ~~l~el~~~l~~ 246 (259)
T 4eek_A 235 TSHAELRAALAE 246 (259)
T ss_dssp CSHHHHHHHHHH
T ss_pred CCHHHHHHHHHh
Confidence 999999998875
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.88 E-value=7.2e-23 Score=172.95 Aligned_cols=197 Identities=18% Similarity=0.141 Sum_probs=134.5
Q ss_pred CceEEEEEcCCcccCCcc-----HHHHHHHhCCCh--HHHhhcCCCChHHHHHHHHHHHHhC-CCCHHH-----------
Q 044553 2 SGIVVIFDFDKTIIDCDS-----DNFVVDELGATD--LFNQLLPTMPWNSLMDRMMKELHSQ-GKTIED----------- 62 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----------- 62 (275)
|+|+|+||+||||+|+.. +..+++++|.+. .......+.......+.+....... ......
T Consensus 25 MIKaViFDlDGTLvDs~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (250)
T 4gib_A 25 MIEAFIFDLDGVITDTAYYHYMAWRKLAHKVGIDIDTKFNESLKGISRMESLDRILEFGNKKYSFSEEEKVRMAEEKNNY 104 (250)
T ss_dssp CCCEEEECTBTTTBCCHHHHHHHHHHHHHTTTCCCCTTGGGGTTTCCHHHHHHHHHHHTTCTTTSCHHHHHHHHHHHHHH
T ss_pred hhheeeecCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHhCcchHHHHHHhhhhhcCCCCCCHHHHHHHHHHHHHH
Confidence 468999999999999865 356777778752 2223333334444444444332211 112111
Q ss_pred HHHHHh---cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCC
Q 044553 63 IVEVLK---RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFT 139 (275)
Q Consensus 63 ~~~~~~---~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~ 139 (275)
+..... ...++||+.++++.|+++|++++++|++. .+...++++|+.++|+.|++++... ..||+|
T Consensus 105 ~~~~~~~~~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~i~~~~~~~------~~KP~p--- 173 (250)
T 4gib_A 105 YVSLIDEITSNDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDFIADAGKCK------NNKPHP--- 173 (250)
T ss_dssp HHHHHTTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSEECCGGGCC------SCTTSS---
T ss_pred HHHHHhhccccccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccceeecccccC------CCCCcH---
Confidence 111122 34689999999999999999999887764 4567899999999999999877542 457776
Q ss_pred CCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEe
Q 044553 140 KCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIH 219 (275)
Q Consensus 140 ~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 219 (275)
+++..++.+++.. |++|+||||+.+|+.+|+++|...+++.... ++ ..+ ..
T Consensus 174 ----------------~~~~~a~~~lg~~-p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~----~~-------~~a-d~ 224 (250)
T 4gib_A 174 ----------------EIFLMSAKGLNVN-PQNCIGIEDASAGIDAINSANMFSVGVGNYE----NL-------KKA-NL 224 (250)
T ss_dssp ----------------HHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEESCTT----TT-------TTS-SE
T ss_pred ----------------HHHHHHHHHhCCC-hHHeEEECCCHHHHHHHHHcCCEEEEECChh----Hh-------ccC-CE
Confidence 6777777777765 5899999999999999999998777664321 11 112 22
Q ss_pred eCCChHHH-HHHHHHHHHHh
Q 044553 220 EWTDGEEL-EQILLHLVNTI 238 (275)
Q Consensus 220 ~~~~~~el-~~~l~~~~~~~ 238 (275)
.++++.|| .+.|++.+++.
T Consensus 225 vi~~l~eL~~~~i~~~~n~~ 244 (250)
T 4gib_A 225 VVDSTNQLKFEYIQEKYNEY 244 (250)
T ss_dssp EESSGGGCCHHHHHHHHHHH
T ss_pred EECChHhCCHHHHHHHHHHH
Confidence 57899988 67777777653
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.7e-22 Score=168.13 Aligned_cols=196 Identities=14% Similarity=0.072 Sum_probs=137.7
Q ss_pred CceEEEEEcCCcccCCcc-----HHHHHHHhCCChHH--HhhcCCCChHHHHHHHHHHHHhCCCC---HHH--------H
Q 044553 2 SGIVVIFDFDKTIIDCDS-----DNFVVDELGATDLF--NQLLPTMPWNSLMDRMMKELHSQGKT---IED--------I 63 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--------~ 63 (275)
++|+|+||+||||+++.. +..+++.+|..... .....+......++.++ ..... .+. +
T Consensus 18 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 93 (237)
T 4ex6_A 18 ADRGVILDLDGTLADTPAAIATITAEVLAAMGTAVSRGAILSTVGRPLPASLAGLL----GVPVEDPRVAEATEEYGRRF 93 (237)
T ss_dssp CCEEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHHTTSCHHHHHHHHH----TSCTTSHHHHHHHHHHHHHH
T ss_pred cCCEEEEcCCCCCcCCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCccHHHHHHHHh----CCCCCHHHHHHHHHHHHHHH
Confidence 479999999999999864 35567777733211 11112223333333222 11111 111 1
Q ss_pred HHHH---hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCC
Q 044553 64 VEVL---KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTK 140 (275)
Q Consensus 64 ~~~~---~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~ 140 (275)
.+.. ....++||+.++|+.|+++|++++|+||+....++.+++++|+..+|+.+++.+... .+||
T Consensus 94 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------~~kp------ 161 (237)
T 4ex6_A 94 GAHVRAAGPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVE------RGKP------ 161 (237)
T ss_dssp HHHHHHHGGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECTTTSS------SCTT------
T ss_pred HHhcccccCCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeCCCCC------CCCC------
Confidence 1222 567799999999999999999999999999999999999999999999998876531 3344
Q ss_pred CCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEee
Q 044553 141 CSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHE 220 (275)
Q Consensus 141 ~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 220 (275)
|..+++.++..++.. +++|++|||+.+|+.+|+.+|...+++..+......+....+ ...
T Consensus 162 -------------~~~~~~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~a------d~v 221 (237)
T 4ex6_A 162 -------------HPDMALHVARGLGIP-PERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGA------DTV 221 (237)
T ss_dssp -------------SSHHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTC------SEE
T ss_pred -------------CHHHHHHHHHHcCCC-HHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCC------CEE
Confidence 458888888888776 589999999999999999999877777655443344433222 225
Q ss_pred CCChHHHHHHHHH
Q 044553 221 WTDGEELEQILLH 233 (275)
Q Consensus 221 ~~~~~el~~~l~~ 233 (275)
..++.||.++|++
T Consensus 222 ~~~~~el~~~l~~ 234 (237)
T 4ex6_A 222 VDSFPAAVTAVLD 234 (237)
T ss_dssp ESSHHHHHHHHHH
T ss_pred ECCHHHHHHHHHc
Confidence 7899999988864
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-22 Score=168.47 Aligned_cols=199 Identities=14% Similarity=0.072 Sum_probs=140.7
Q ss_pred CceEEEEEcCCcccCCcc-----HHHHHHHhCCChHHHhh--cCCCChHHHHHHHHHHHHhCCCCHHHHH----------
Q 044553 2 SGIVVIFDFDKTIIDCDS-----DNFVVDELGATDLFNQL--LPTMPWNSLMDRMMKELHSQGKTIEDIV---------- 64 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 64 (275)
++++|+||+||||+++.. +..+++++|.+...... ..+.........++.... ...+.+.+.
T Consensus 5 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 83 (233)
T 3s6j_A 5 PQTSFIFDLDGTLTDSVYQNVAAWKEALDAENIPLAMWRIHRKIGMSGGLMLKSLSRETG-MSITDEQAERLSEKHAQAY 83 (233)
T ss_dssp CCCEEEECCBTTTEECHHHHHHHHHHHHHHTTCCCCHHHHHHHTTSCHHHHHHHHHHC-----CCHHHHHHHHHHHHHHH
T ss_pred cCcEEEEcCCCccccChHHHHHHHHHHHHHcCCCCCHHHHHHHcCCcHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHH
Confidence 478999999999999965 35677777876322211 122333333343333221 122222221
Q ss_pred -HHHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCC
Q 044553 65 -EVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSH 143 (275)
Q Consensus 65 -~~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~ 143 (275)
.......++|++.++|+.|++.|++++|+||+....++..++++|+..+|+.+++.+... ..||
T Consensus 84 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------~~kp--------- 148 (233)
T 3s6j_A 84 ERLQHQIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVTRDDVS------YGKP--------- 148 (233)
T ss_dssp HHTGGGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEECGGGSS------CCTT---------
T ss_pred HHhhccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeeccccCC------CCCC---------
Confidence 112347899999999999999999999999999999999999999999999988766431 2344
Q ss_pred CCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCC
Q 044553 144 GCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTD 223 (275)
Q Consensus 144 ~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 223 (275)
|..+++.++..++.. ++++++|||+.+|+.+|+.+|+..+++..+......+....+ ....++
T Consensus 149 ----------~~~~~~~~~~~l~~~-~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~a------d~v~~~ 211 (233)
T 3s6j_A 149 ----------DPDLFLAAAKKIGAP-IDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGA------LRVYED 211 (233)
T ss_dssp ----------STHHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTC------SEEESS
T ss_pred ----------ChHHHHHHHHHhCCC-HHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCC------CEEECC
Confidence 458888999888776 589999999999999999999877777665454445443322 225789
Q ss_pred hHHHHHHHHH
Q 044553 224 GEELEQILLH 233 (275)
Q Consensus 224 ~~el~~~l~~ 233 (275)
+.||.++|++
T Consensus 212 ~~el~~~l~~ 221 (233)
T 3s6j_A 212 PLDLLNHLDE 221 (233)
T ss_dssp HHHHHHTGGG
T ss_pred HHHHHHHHHH
Confidence 9999887764
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=99.88 E-value=9.1e-23 Score=169.07 Aligned_cols=195 Identities=18% Similarity=0.208 Sum_probs=134.9
Q ss_pred CCceEEEEEcCCcccCCcc-----HHHHHHHhCCChH-HHhh--cCCCChHHHHHHHHHHHHhCCCC--HHHHHHHH---
Q 044553 1 MSGIVVIFDFDKTIIDCDS-----DNFVVDELGATDL-FNQL--LPTMPWNSLMDRMMKELHSQGKT--IEDIVEVL--- 67 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--- 67 (275)
|++++|+||+||||++++. +..+++.+|.+.. .... ..+......++..+. ..... .+.+.+.+
T Consensus 1 M~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 77 (222)
T 2nyv_A 1 MSLRVILFDLDGTLIDSAKDIALALEKTLKELGLEEYYPDNVTKYIGGGVRALLEKVLK---DKFREEYVEVFRKHYLEN 77 (222)
T ss_dssp CEECEEEECTBTTTEECHHHHHHHHHHHHHHTTCGGGCCSCGGGGCSSCHHHHHHHHHG---GGCCTHHHHHHHHHHHHC
T ss_pred CCCCEEEECCCCcCCCCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhCcCHHHHHHHHhC---hHHHHHHHHHHHHHHHHh
Confidence 7789999999999999975 3567777887521 1111 112333444443322 11111 12233322
Q ss_pred --hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCC
Q 044553 68 --KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGC 145 (275)
Q Consensus 68 --~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~ 145 (275)
....++||+.++|+.|+++|++++|+||+....++.+++++|+..+|+.+++++... ..||
T Consensus 78 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~------~~Kp----------- 140 (222)
T 2nyv_A 78 PVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFG------EKKP----------- 140 (222)
T ss_dssp SCSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTSSC------TTCC-----------
T ss_pred ccccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEEEecCcCC------CCCC-----------
Confidence 346789999999999999999999999999999999999999999999998876421 2344
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChH
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGE 225 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 225 (275)
|+..++.++..++.. +++|+||||+.+|+.+|+.+|...+++..+...... ..+ ...++++.
T Consensus 141 --------~~~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~--------~~~-~~~~~~~~ 202 (222)
T 2nyv_A 141 --------SPTPVLKTLEILGEE-PEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS--------QIP-DFTLSRPS 202 (222)
T ss_dssp --------TTHHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC--------CCC-SEEESSTT
T ss_pred --------ChHHHHHHHHHhCCC-chhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc--------cCC-CEEECCHH
Confidence 447788888887765 589999999999999999888866665443211110 112 23578999
Q ss_pred HHHHHHHH
Q 044553 226 ELEQILLH 233 (275)
Q Consensus 226 el~~~l~~ 233 (275)
||..++++
T Consensus 203 el~~~l~~ 210 (222)
T 2nyv_A 203 DLVKLMDN 210 (222)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 99887754
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=5e-22 Score=168.79 Aligned_cols=205 Identities=14% Similarity=0.026 Sum_probs=140.0
Q ss_pred CceEEEEEcCCcccCCcc------HHHHHHHhCCChHHHhhcC--CCChHHHHHH---------HHHHHHhCCCCHHHHH
Q 044553 2 SGIVVIFDFDKTIIDCDS------DNFVVDELGATDLFNQLLP--TMPWNSLMDR---------MMKELHSQGKTIEDIV 64 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~------~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~---------~~~~~~~~~~~~~~~~ 64 (275)
++++|+||+||||++++. +..+++++|.+........ +......+.. .+........+.+.+.
T Consensus 13 ~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (277)
T 3iru_A 13 PVEALILDWAGTTIDFGSLAPVYAFMELFKQEGIEVTQAEAREPMGTEKSEHIRRMLGNSRIANAWLSIKGQASNEEDIK 92 (277)
T ss_dssp CCCEEEEESBTTTBSTTCCHHHHHHHHHHHTTTCCCCHHHHHTTTTSCHHHHHHHHTTSHHHHHHHHHHHSSCCCHHHHH
T ss_pred cCcEEEEcCCCCcccCCcccHHHHHHHHHHHhCCCCCHHHHHHHhcCchHHHHHHhccchHHHHHHHHHhccCCCHHHHH
Confidence 368999999999999754 2456666777632222211 1222222211 1122222233333221
Q ss_pred H------------HHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCC-cceEecCCCccCCCCcee
Q 044553 65 E------------VLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDC-FSEINTNPGFVDEEGRLR 131 (275)
Q Consensus 65 ~------------~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~-fd~i~~~~~~~~~~g~~~ 131 (275)
. ......++||+.++|+.|+++|++++|+||+....++..++.+|+..+ |+.+++.+... .
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~------~ 166 (277)
T 3iru_A 93 RLYDLFAPIQTRIVAQRSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVV------R 166 (277)
T ss_dssp HHHHHHHHHHHHHHHHTCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEECGGGSS------S
T ss_pred HHHHHHHHHHHHHhhccCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEecHHhcC------C
Confidence 1 123478999999999999999999999999999999999999998888 89888766521 3
Q ss_pred ecccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCC-CeEEEEcCCCCCcccccccCCCCeEeecCCc---------
Q 044553 132 IFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGN-KKIIYLGDGSGDYCPSLKLSEGDHVMPRKNF--------- 201 (275)
Q Consensus 132 ~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~-~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~--------- 201 (275)
+|| |..+++.++..++.. + ++|+||||+.+|+.+|+.+|...+++..+..
T Consensus 167 ~kp-------------------~~~~~~~~~~~lgi~-~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~ 226 (277)
T 3iru_A 167 GRP-------------------FPDMALKVALELEVG-HVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDW 226 (277)
T ss_dssp CTT-------------------SSHHHHHHHHHHTCS-CGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHH
T ss_pred CCC-------------------CHHHHHHHHHHcCCC-CCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhh
Confidence 355 447888888888776 5 8999999999999999999987677665432
Q ss_pred --------------hhhHHHhhCCCceeEEEeeCCChHHHHHHHHHHHHHh
Q 044553 202 --------------PLWDLIIRNPMLIKAEIHEWTDGEELEQILLHLVNTI 238 (275)
Q Consensus 202 --------------~~~~l~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~~ 238 (275)
....+....+ .+..+++.||.++|+++-.++
T Consensus 227 ~~~~~~~~~~~~~~~~~~l~~~~a------d~v~~~~~el~~~l~~~~~~~ 271 (277)
T 3iru_A 227 QALSSDEQQSYRQHAEQRLFNAGA------HYVIDSVADLETVITDVNRRL 271 (277)
T ss_dssp HHSCHHHHHHHHHHHHHHHHHHTC------SEEESSGGGTHHHHHHHHHHH
T ss_pred hhcchhhhhhhhhhhHHHHhhCCC------CEEecCHHHHHHHHHHHHHHH
Confidence 2233333322 235799999999988776544
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2.3e-21 Score=158.40 Aligned_cols=196 Identities=16% Similarity=0.187 Sum_probs=136.9
Q ss_pred ceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHHHHH
Q 044553 3 GIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAIKS 82 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~ 82 (275)
+++|+||+||||++ ..+..+++.+|.+...........+...+......+...+.+.+++.+......++||+.++|+.
T Consensus 2 ~k~viFD~DGTL~d-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~ 80 (206)
T 1rku_A 2 MEIACLDLEGVLVP-EIWIAFAEKTGIDALKATTRDIPDYDVLMKQRLRILDEHGLKLGDIQEVIATLKPLEGAVEFVDW 80 (206)
T ss_dssp CEEEEEESBTTTBC-CHHHHHHHHHTCGGGGCCTTTCCCHHHHHHHHHHHHHHTTCCHHHHHHHHTTCCCCTTHHHHHHH
T ss_pred CcEEEEccCCcchh-hHHHHHHHHcCChHHHHHhcCcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHhcCCCccHHHHHHH
Confidence 57999999999999 56788888888864311112233445555544444444455666676677788999999999999
Q ss_pred HHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCc-ceEecCCCccCCCCceee--cccCCCCCCCCCCCcCCCCCchHHHHH
Q 044553 83 AHALGCELRIVSDANLFFIETILEHLGIRDCF-SEINTNPGFVDEEGRLRI--FPFHDFTKCSHGCNLCPPNMCKGVVIE 159 (275)
Q Consensus 83 L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~f-d~i~~~~~~~~~~g~~~~--kp~~~~~~~~~~~~~~~~~~~K~~~l~ 159 (275)
|+++ ++++|+||++...++.+++++|+..+| +.+++++. +...+ +|.|. .|..+++
T Consensus 81 l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~-----~~~~~~~~p~p~---------------~~~~~l~ 139 (206)
T 1rku_A 81 LRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDS-----DRVVGYQLRQKD---------------PKRQSVI 139 (206)
T ss_dssp HHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTT-----SCEEEEECCSSS---------------HHHHHHH
T ss_pred HHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcCC-----ceEEeeecCCCc---------------hHHHHHH
Confidence 9999 999999999999999999999999999 46665432 11111 25442 3667777
Q ss_pred HHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHHHHHHH
Q 044553 160 RIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHLV 235 (275)
Q Consensus 160 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~l~~~~ 235 (275)
++... +++|+||||+.+|+.+|+.+|.. +++ ... ..+....+. +..++++.+|..+|++++
T Consensus 140 ~l~~~-----~~~~~~iGD~~~Di~~a~~aG~~-~~~--~~~--~~~~~~~~~-----~~~~~~~~~l~~~l~~~~ 200 (206)
T 1rku_A 140 AFKSL-----YYRVIAAGDSYNDTTMLSEAHAG-ILF--HAP--ENVIREFPQ-----FPAVHTYEDLKREFLKAS 200 (206)
T ss_dssp HHHHT-----TCEEEEEECSSTTHHHHHHSSEE-EEE--SCC--HHHHHHCTT-----SCEECSHHHHHHHHHHHC
T ss_pred HHHhc-----CCEEEEEeCChhhHHHHHhcCcc-EEE--CCc--HHHHHHHhh-----hccccchHHHHHHHHHHh
Confidence 76543 57999999999999999887764 333 211 233222221 113789999998887654
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-22 Score=165.83 Aligned_cols=194 Identities=11% Similarity=0.124 Sum_probs=131.2
Q ss_pred CCceEEEEEcCCcccCCcc-----HHHHHHHhCCChHHH--hhcCCCChHHHHHHHHHHHHhCCCCHHHHH----HHHh-
Q 044553 1 MSGIVVIFDFDKTIIDCDS-----DNFVVDELGATDLFN--QLLPTMPWNSLMDRMMKELHSQGKTIEDIV----EVLK- 68 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~- 68 (275)
||+|+|+||+||||+++.. +..+++.+|.+.... ....+.......+.+..... .....+++. ....
T Consensus 3 ~m~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 81 (214)
T 3e58_A 3 AMVEAIIFDMDGVLFDTEKYYYDRRASFLGQKGISIDHLPPSFFIGGNTKQVWENILRDEY-DKWDVSTLQEEYNTYKQN 81 (214)
T ss_dssp -CCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTCCCTTSCHHHHTTSCGGGCHHHHHGGGG-GGSCHHHHHHHHHHHHHH
T ss_pred ccccEEEEcCCCCccccHHHHHHHHHHHHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHhhc-CCCCHHHHHHHHHHHHHH
Confidence 6789999999999999865 355677777642111 11112222333333332221 122223322 2221
Q ss_pred -----cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCC
Q 044553 69 -----RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSH 143 (275)
Q Consensus 69 -----~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~ 143 (275)
...++|++.++|+.|+++|++++++||+....++..++++|+..+|+.+++++... ..||
T Consensus 82 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------~~kp--------- 146 (214)
T 3e58_A 82 NPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFK------ESKP--------- 146 (214)
T ss_dssp SCCCHHHHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGCS------SCTT---------
T ss_pred hhcccCCCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeeccccc------CCCC---------
Confidence 23689999999999999999999999999999999999999999999998876431 3455
Q ss_pred CCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCC
Q 044553 144 GCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTD 223 (275)
Q Consensus 144 ~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 223 (275)
|...++.++..++.. +++|++|||+.+|+.+|+.+|...+.+.+.+.+... . .+ ....++
T Consensus 147 ----------~~~~~~~~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~---~---~a---~~~~~~ 206 (214)
T 3e58_A 147 ----------NPEIYLTALKQLNVQ-ASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQ---S---AA---KGLLDS 206 (214)
T ss_dssp ----------SSHHHHHHHHHHTCC-GGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCC---T---TS---SEEESS
T ss_pred ----------ChHHHHHHHHHcCCC-hHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchh---c---cH---HHHHHH
Confidence 347888888888765 589999999999999999999866666554332211 1 11 235678
Q ss_pred hHHHHHH
Q 044553 224 GEELEQI 230 (275)
Q Consensus 224 ~~el~~~ 230 (275)
+.||.++
T Consensus 207 ~~el~~~ 213 (214)
T 3e58_A 207 LTDVLDL 213 (214)
T ss_dssp GGGGGGG
T ss_pred HHHHHhh
Confidence 8877654
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.87 E-value=6.5e-22 Score=166.22 Aligned_cols=197 Identities=16% Similarity=0.152 Sum_probs=132.0
Q ss_pred CceEEEEEcCCcccCCcc-----HHHHHHHhCCChH----HHhhcCCCChHHHHHHHHHHHH---hCCCCHHHH------
Q 044553 2 SGIVVIFDFDKTIIDCDS-----DNFVVDELGATDL----FNQLLPTMPWNSLMDRMMKELH---SQGKTIEDI------ 63 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~------ 63 (275)
++++|+||+||||+|+.. +..+++.+|.+.. ..... +......++..+.... ......+.+
T Consensus 22 ~~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (243)
T 2hsz_A 22 QFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWI-GNGADVLSQRAVDWACKQAEKELTEDEFKYFKRQ 100 (243)
T ss_dssp SCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHHHC-SSCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred cCCEEEEcCCCcCCCCHHHHHHHHHHHHHHcCCCCCCHHHHHHHh-CchHHHHHHHHhhhhhccccccCCHHHHHHHHHH
Confidence 368999999999999964 3466777887521 22222 2333444444333211 122332221
Q ss_pred -HHH-----HhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCC
Q 044553 64 -VEV-----LKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHD 137 (275)
Q Consensus 64 -~~~-----~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~ 137 (275)
.+. .....++||+.++|+.|+++|++++|+||+....++.+++++|+..+|+.+++++... ..||.|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~------~~Kp~~- 173 (243)
T 2hsz_A 101 FGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLP------EIKPHP- 173 (243)
T ss_dssp HHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSS------SCTTSS-
T ss_pred HHHHHHHhccccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEEEecccCC------CCCcCH-
Confidence 111 1236789999999999999999999999999999999999999999999998766431 345543
Q ss_pred CCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEE
Q 044553 138 FTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAE 217 (275)
Q Consensus 138 ~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 217 (275)
..++.++.+++.. +++|+||||+.+|+.+|+.+|...+++.++......+....+
T Consensus 174 ------------------~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~a------ 228 (243)
T 2hsz_A 174 ------------------APFYYLCGKFGLY-PKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKP------ 228 (243)
T ss_dssp ------------------HHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCC------
T ss_pred ------------------HHHHHHHHHhCcC-hhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCC------
Confidence 6777888877765 589999999999999999888866665543221112222221
Q ss_pred EeeCCChHHHHHHH
Q 044553 218 IHEWTDGEELEQIL 231 (275)
Q Consensus 218 ~~~~~~~~el~~~l 231 (275)
...++++.||.+++
T Consensus 229 d~vi~~~~el~~~l 242 (243)
T 2hsz_A 229 DWIFDDFADILKIT 242 (243)
T ss_dssp SEEESSGGGGGGGT
T ss_pred CEEECCHHHHHHHh
Confidence 22467888776543
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.87 E-value=9.4e-22 Score=164.60 Aligned_cols=208 Identities=19% Similarity=0.219 Sum_probs=139.4
Q ss_pred CceEEEEEcCCcccCCccHHHHHHHhCCChH---HHhhcCC-CChHHHHHHHHHHHHhCCCCHHHHHHH-HhcCCCCCCH
Q 044553 2 SGIVVIFDFDKTIIDCDSDNFVVDELGATDL---FNQLLPT-MPWNSLMDRMMKELHSQGKTIEDIVEV-LKRIPIHPRV 76 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pg~ 76 (275)
++++|+|||||||+++++...+++.++.... ......+ ..+.+.+...+..+. ....+++.++ .....++||+
T Consensus 5 ~~k~viFD~DGTL~d~ds~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~pg~ 82 (236)
T 2fea_A 5 RKPFIICDFDGTITMNDNIINIMKTFAPPEWMALKDGVLSKTLSIKEGVGRMFGLLP--SSLKEEITSFVLEDAKIREGF 82 (236)
T ss_dssp CCEEEEECCTTTTBSSCHHHHHHHHHSCTHHHHHHHHHHTTSSCHHHHHHHHHTTSB--GGGHHHHHHHHHHHCCBCTTH
T ss_pred CCcEEEEeCCCCCCccchHHHHHHHhchhhHHHHHHHHHhCcCcHHHHHHHHHHhcC--CChHHHHHHHHhcCCCCCccH
Confidence 3589999999999999888777777765321 1223332 445555554443321 1124555555 4568999999
Q ss_pred HHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCcee---ecccCC-CCCCCCCCCcCCCCC
Q 044553 77 VPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLR---IFPFHD-FTKCSHGCNLCPPNM 152 (275)
Q Consensus 77 ~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~---~kp~~~-~~~~~~~~~~~~~~~ 152 (275)
.++|+.|+++|++++|+||++...++.+++ |+..+ +.+++++.... ++.+. .||.|. .+. .++.
T Consensus 83 ~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~~-~~~~~~~~~kp~p~~~~~--------~~~~ 150 (236)
T 2fea_A 83 REFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASFD-NDYIHIDWPHSCKGTCSN--------QCGC 150 (236)
T ss_dssp HHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEECS-SSBCEEECTTCCCTTCCS--------CCSS
T ss_pred HHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEEc-CCceEEecCCCCcccccc--------ccCC
Confidence 999999999999999999999999999988 87666 88888776432 22222 356553 110 1346
Q ss_pred chHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHHHH
Q 044553 153 CKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILL 232 (275)
Q Consensus 153 ~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~l~ 232 (275)
+|..+++++.. .+++|+||||+.+|+.+|+.+|. .++..+ ..+.+.... .+ ...++++.||..+|.
T Consensus 151 ~K~~~~~~~~~-----~~~~~~~vGDs~~Di~~a~~aG~---~~~~~~--~~~~~~~~~-~~---~~~~~~~~el~~~l~ 216 (236)
T 2fea_A 151 CKPSVIHELSE-----PNQYIIMIGDSVTDVEAAKLSDL---CFARDY--LLNECREQN-LN---HLPYQDFYEIRKEIE 216 (236)
T ss_dssp CHHHHHHHHCC-----TTCEEEEEECCGGGHHHHHTCSE---EEECHH--HHHHHHHTT-CC---EECCSSHHHHHHHHH
T ss_pred cHHHHHHHHhc-----cCCeEEEEeCChHHHHHHHhCCe---eeechH--HHHHHHHCC-CC---eeecCCHHHHHHHHH
Confidence 68888887643 25899999999999999977655 333322 222222211 11 347899999999988
Q ss_pred HHHHH
Q 044553 233 HLVNT 237 (275)
Q Consensus 233 ~~~~~ 237 (275)
++.+.
T Consensus 217 ~~~~~ 221 (236)
T 2fea_A 217 NVKEV 221 (236)
T ss_dssp TSHHH
T ss_pred HhHHH
Confidence 76543
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.87 E-value=6.2e-22 Score=164.12 Aligned_cols=202 Identities=16% Similarity=0.173 Sum_probs=134.1
Q ss_pred CCceEEEEEcCCcccCCccH-----HHHHHH-hCCChH-HHhhcCCCChHHHHHHHHHHHHhCCCCH-------HHH---
Q 044553 1 MSGIVVIFDFDKTIIDCDSD-----NFVVDE-LGATDL-FNQLLPTMPWNSLMDRMMKELHSQGKTI-------EDI--- 63 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~-----~~~~~~-~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~--- 63 (275)
|++++|+||+||||++++.. ..+++. +|.+.. ......+......+..++..+ +... ..+
T Consensus 2 M~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 78 (234)
T 2hcf_A 2 MSRTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNV---GLERAEIADKFDKAKET 78 (234)
T ss_dssp -CCEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCCCCC---CCTTCCHHHHHHHHHHTT---TCCHHHHHHHHHHHHHH
T ss_pred CcceEEEEcCCCCcccCccchHHHHHHHHHHHhCCCCccchhhhcCCChHHHHHHHHHHc---CCCcccchhHHHHHHHH
Confidence 67899999999999998763 345555 566432 111111223333333333321 2211 111
Q ss_pred -HHHH------hcCCCCCCHHHHHHHHHHc-CCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeeccc
Q 044553 64 -VEVL------KRIPIHPRVVPAIKSAHAL-GCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPF 135 (275)
Q Consensus 64 -~~~~------~~~~~~pg~~e~L~~L~~~-g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~ 135 (275)
.... ....++||+.++|+.|+++ |++++|+||+....++..++.+|+..+|+.+++.+... ...||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~-----~~~k~- 152 (234)
T 2hcf_A 79 YIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDAL-----DRNEL- 152 (234)
T ss_dssp HHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCS-----SGGGH-
T ss_pred HHHHHHHHhccCCCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCcceecCCCc-----Cccch-
Confidence 1111 3467899999999999999 99999999999999999999999999999766544321 01223
Q ss_pred CCCCCCCCCCCcCCCCCchHHHHHHHHHhhh--cCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCc
Q 044553 136 HDFTKCSHGCNLCPPNMCKGVVIERIQASLS--KEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPML 213 (275)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~--~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~ 213 (275)
+..+++.++..++ .. +++|++|||+.+|+.+|+.+|...+++..+......+....+
T Consensus 153 ------------------~~~~~~~~~~~lg~~~~-~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a-- 211 (234)
T 2hcf_A 153 ------------------PHIALERARRMTGANYS-PSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKP-- 211 (234)
T ss_dssp ------------------HHHHHHHHHHHHCCCCC-GGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCC--
T ss_pred ------------------HHHHHHHHHHHhCCCCC-cccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCC--
Confidence 3577788888877 44 589999999999999999988876776654433333322112
Q ss_pred eeEEEeeCCChHHHHHHHHHHHH
Q 044553 214 IKAEIHEWTDGEELEQILLHLVN 236 (275)
Q Consensus 214 ~~~~~~~~~~~~el~~~l~~~~~ 236 (275)
...++++.||..+|+++.+
T Consensus 212 ----~~v~~~~~el~~~l~~~~~ 230 (234)
T 2hcf_A 212 ----GTLFKNFAETDEVLASILT 230 (234)
T ss_dssp ----SEEESCSCCHHHHHHHHHC
T ss_pred ----CEEeCCHHhHHHHHHHHhc
Confidence 1256889999988887663
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.7e-21 Score=161.57 Aligned_cols=138 Identities=14% Similarity=0.176 Sum_probs=108.7
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCC
Q 044553 63 IVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCS 142 (275)
Q Consensus 63 ~~~~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~ 142 (275)
+.+.+....++||+.++|+.|+++|++++|+||+....++..++++|+..+|+.+++.+... ..||
T Consensus 91 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------~~kp-------- 156 (233)
T 3umb_A 91 LMREYACLSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDAVR------LYKT-------- 156 (233)
T ss_dssp HHHHHHSCEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEGGGTT------CCTT--------
T ss_pred HHHHHhcCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEecccC------CCCc--------
Confidence 44455678999999999999999999999999999999999999999999999998776431 3455
Q ss_pred CCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCC
Q 044553 143 HGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWT 222 (275)
Q Consensus 143 ~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 222 (275)
|..+++.++..++.. +++|++|||+.+|+.+|+.+|...+.+.+++.....+ .. .+ ....+
T Consensus 157 -----------~~~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~-~~-----~~-~~v~~ 217 (233)
T 3umb_A 157 -----------APAAYALAPRAFGVP-AAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEAL-DV-----AP-AAAGH 217 (233)
T ss_dssp -----------SHHHHTHHHHHHTSC-GGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSS-SC-----CC-SEEES
T ss_pred -----------CHHHHHHHHHHhCCC-cccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhc-cC-----CC-CEEEC
Confidence 447788888888765 5899999999999999999998777766654432221 11 12 23679
Q ss_pred ChHHHHHHHHH
Q 044553 223 DGEELEQILLH 233 (275)
Q Consensus 223 ~~~el~~~l~~ 233 (275)
++.||.++|++
T Consensus 218 ~~~el~~~l~~ 228 (233)
T 3umb_A 218 DMRDLLQFVQA 228 (233)
T ss_dssp SHHHHHHHHHC
T ss_pred CHHHHHHHHHH
Confidence 99999988874
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2e-22 Score=164.51 Aligned_cols=187 Identities=14% Similarity=0.125 Sum_probs=130.9
Q ss_pred CceEEEEEcCCcccCCcc-HHHHHHHhCCChHH--HhhcCCCChHHHHHHHHHHHHhCCCCHHHH-HHHHhcCCCCCCHH
Q 044553 2 SGIVVIFDFDKTIIDCDS-DNFVVDELGATDLF--NQLLPTMPWNSLMDRMMKELHSQGKTIEDI-VEVLKRIPIHPRVV 77 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~-~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~pg~~ 77 (275)
++|+|+||+||||+++.. +..+++.+|.+... .......... ........ .+.+ ........++||+.
T Consensus 5 ~~k~iifDlDGTL~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 76 (205)
T 3m9l_A 5 EIKHWVFDMDGTLTIAVHDFAAIREALSIPAEDDILTHLAALPAD--ESAAKHAW------LLEHERDLAQGSRPAPGAV 76 (205)
T ss_dssp GCCEEEECTBTTTEEEEECHHHHHHHTTCCTTSCHHHHHHHSCHH--HHHHHHHH------HHHTHHHHEEEEEECTTHH
T ss_pred cCCEEEEeCCCcCcccHHHHHHHHHHhCCCchHHHHHHHhcCChH--HHHHHHHH------HHHHHHHHhhcCCCCccHH
Confidence 478999999999999754 56777888875321 1111100000 00000000 0111 12234578999999
Q ss_pred HHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCc--ceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchH
Q 044553 78 PAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCF--SEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKG 155 (275)
Q Consensus 78 e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~f--d~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~ 155 (275)
++|+.|+++|++++|+||+....++..++.+|+..+| +.+++.+.. .+||. .
T Consensus 77 ~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~~-------~~kp~-------------------~ 130 (205)
T 3m9l_A 77 ELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDEA-------PPKPH-------------------P 130 (205)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTTS-------CCTTS-------------------S
T ss_pred HHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCCC-------CCCCC-------------------H
Confidence 9999999999999999999999999999999999999 778876531 34553 4
Q ss_pred HHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHHHHH
Q 044553 156 VVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLH 233 (275)
Q Consensus 156 ~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~l~~ 233 (275)
.+++.++..++.. +++|++|||+.+|+.+|+.+|...+++.+...... . .+ ....+++.||...+++
T Consensus 131 ~~~~~~~~~~g~~-~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~----~-----~a-d~v~~~~~el~~~~~~ 197 (205)
T 3m9l_A 131 GGLLKLAEAWDVS-PSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWP----E-----LT-DWHARDCAQLRDLLSA 197 (205)
T ss_dssp HHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEECSSSSCSCG----G-----GC-SEECSSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCccc----c-----cC-CEEeCCHHHHHHHHHh
Confidence 7888888888776 58999999999999999998887777665432111 1 12 2367999999887763
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.4e-22 Score=166.92 Aligned_cols=192 Identities=18% Similarity=0.155 Sum_probs=134.7
Q ss_pred ceEEEEEcCCcccCCcc-----HHHHHHHhCCChHHHhh--cCCCChHHHHHHHHHHHHhCCCCHHH-------HHHH--
Q 044553 3 GIVVIFDFDKTIIDCDS-----DNFVVDELGATDLFNQL--LPTMPWNSLMDRMMKELHSQGKTIED-------IVEV-- 66 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-- 66 (275)
+++|+||+||||+++.. +..+++.+|.+...... ..+......+...+ +.+.+. +.+.
T Consensus 29 ik~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 102 (240)
T 3sd7_A 29 YEIVLFDLDGTLTDPKEGITKSIQYSLNSFGIKEDLENLDQFIGPPLHDTFKEYY------KFEDKKAKEAVEKYREYFA 102 (240)
T ss_dssp CSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCGGGGGGGSSSCHHHHHHHTS------CCCHHHHHHHHHHHHHHHH
T ss_pred ccEEEEecCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHHHhCccHHHHHHHHh------CCCHHHHHHHHHHHHHHHH
Confidence 59999999999999964 45677778876211111 11122222222111 222221 1111
Q ss_pred ---HhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCC
Q 044553 67 ---LKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSH 143 (275)
Q Consensus 67 ---~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~ 143 (275)
.....++||+.++|+.|+++|++++|+||+....++..++.+|+..+|+.+++.+... ..||
T Consensus 103 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------~~kp--------- 167 (240)
T 3sd7_A 103 DKGIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDG------TRVN--------- 167 (240)
T ss_dssp HTGGGCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTS------CCCC---------
T ss_pred HhcccccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEeccccC------CCCC---------
Confidence 1236799999999999999999999999999999999999999999999998765431 2333
Q ss_pred CCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCC
Q 044553 144 GCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTD 223 (275)
Q Consensus 144 ~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 223 (275)
|..+++.++..++..++++|++|||+.+|+.+|+.+|...+++..+......+....+ ....++
T Consensus 168 ----------~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~a------d~v~~~ 231 (240)
T 3sd7_A 168 ----------KNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEP------TYIVEN 231 (240)
T ss_dssp ----------HHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCC------SEEESS
T ss_pred ----------CHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCC------CEEECC
Confidence 6789999999988762489999999999999999999877777655444444433333 225688
Q ss_pred hHHHHHHH
Q 044553 224 GEELEQIL 231 (275)
Q Consensus 224 ~~el~~~l 231 (275)
+.||.++|
T Consensus 232 ~~el~~~l 239 (240)
T 3sd7_A 232 VESIKDIL 239 (240)
T ss_dssp STTHHHHH
T ss_pred HHHHHHHh
Confidence 88888765
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.86 E-value=3.7e-22 Score=165.31 Aligned_cols=203 Identities=18% Similarity=0.175 Sum_probs=129.3
Q ss_pred CceEEEEEcCCcccCCccHHHHHHHhCCChHHH----hhcCC-CChHHHHHHHHHHHHhCCCCHHHHHHHHh--cCCCCC
Q 044553 2 SGIVVIFDFDKTIIDCDSDNFVVDELGATDLFN----QLLPT-MPWNSLMDRMMKELHSQGKTIEDIVEVLK--RIPIHP 74 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p 74 (275)
++++|+||+||||+|++++..+++.+|.+.... ....+ ..+...+...+... ....+.+.++.. ..+++|
T Consensus 13 ~~k~viFD~DGTLvd~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 89 (225)
T 1nnl_A 13 SADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALI---QPSREQVQRLIAEQPPHLTP 89 (225)
T ss_dssp HCSEEEEETBTTTBSSCHHHHHHHHTTCTTTC------------CHHHHHHHHHHHH---CCCHHHHHHHHHHSCCCBCT
T ss_pred hCCEEEEeCcccccccccHHHHHHHhCCcHHHHHHHHHHHcCCccHHHHHHHHHHHh---cCCHHHHHHHHHhccCCCCc
Confidence 368999999999999999988999998753211 11111 22333333322222 234455555544 378999
Q ss_pred CHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcC--CcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCC
Q 044553 75 RVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRD--CFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNM 152 (275)
Q Consensus 75 g~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~--~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~ 152 (275)
|+.++|+.|+++|++++|+||++...++.+++++|+.. +|+.++..+ .+|.+.+.... ...|. ..
T Consensus 90 g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~----~~~~~~~~~~~--------~~~~~-~~ 156 (225)
T 1nnl_A 90 GIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFY----FNGEYAGFDET--------QPTAE-SG 156 (225)
T ss_dssp THHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEEC----TTSCEEEECTT--------SGGGS-TT
T ss_pred cHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEc----CCCcEecCCCC--------CcccC-CC
Confidence 99999999999999999999999999999999999973 777654211 12222211100 00001 23
Q ss_pred chHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHHHH
Q 044553 153 CKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILL 232 (275)
Q Consensus 153 ~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~l~ 232 (275)
+|+.+++.++.+++. ++|+|||||.+|+.+|+++|. .+.+... .. .......+ ...++++.||.++++
T Consensus 157 ~Kp~~~~~~~~~~~~---~~~~~vGDs~~Di~~a~~ag~-~i~~~~~-~~-~~~~~~~~------~~~~~~~~el~~~l~ 224 (225)
T 1nnl_A 157 GKGKVIKLLKEKFHF---KKIIMIGDGATDMEACPPADA-FIGFGGN-VI-RQQVKDNA------KWYITDFVELLGELE 224 (225)
T ss_dssp HHHHHHHHHHHHHCC---SCEEEEESSHHHHTTTTTSSE-EEEECSS-CC-CHHHHHHC------SEEESCGGGGCC---
T ss_pred chHHHHHHHHHHcCC---CcEEEEeCcHHhHHHHHhCCe-EEEecCc-cc-cHHHHhcC------CeeecCHHHHHHHHh
Confidence 588999998888754 589999999999999988877 4444221 11 12222212 225688888876553
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.1e-21 Score=162.17 Aligned_cols=140 Identities=11% Similarity=0.091 Sum_probs=105.4
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCC
Q 044553 63 IVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCS 142 (275)
Q Consensus 63 ~~~~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~ 142 (275)
+...+....++||+.++|+.|+++|++++|+||++...++.+++++|+..+|+.+++++... ..||
T Consensus 97 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------~~Kp-------- 162 (240)
T 2no4_A 97 LMSAYKELSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLK------IYKP-------- 162 (240)
T ss_dssp HHHHHHTCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGTT------CCTT--------
T ss_pred HHHHHhcCCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEEccccC------CCCC--------
Confidence 34445678899999999999999999999999999999999999999999999998765421 2344
Q ss_pred CCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCC
Q 044553 143 HGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWT 222 (275)
Q Consensus 143 ~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 222 (275)
|...++.++..++.. +++|++|||+.+|+.+|+.+|...+.+.+++. ... .... + +++ .++
T Consensus 163 -----------~~~~~~~~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~-~~~-~~~~---~-~~~-~~~ 223 (240)
T 2no4_A 163 -----------DPRIYQFACDRLGVN-PNEVCFVSSNAWDLGGAGKFGFNTVRINRQGN-PPE-YEFA---P-LKH-QVN 223 (240)
T ss_dssp -----------SHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHHTCEEEEECTTCC-CCC-CTTS---C-CSE-EES
T ss_pred -----------CHHHHHHHHHHcCCC-cccEEEEeCCHHHHHHHHHCCCEEEEECCCCC-CCc-ccCC---C-Cce-eeC
Confidence 457888888887765 58999999999999999998887666655432 111 1111 1 012 568
Q ss_pred ChHHHHHHHHHHH
Q 044553 223 DGEELEQILLHLV 235 (275)
Q Consensus 223 ~~~el~~~l~~~~ 235 (275)
++.||.+++.+++
T Consensus 224 ~~~el~~~l~~~~ 236 (240)
T 2no4_A 224 SLSELWPLLAKNV 236 (240)
T ss_dssp SGGGHHHHHCC--
T ss_pred CHHHHHHHHHHhh
Confidence 9999988776544
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.8e-21 Score=160.88 Aligned_cols=192 Identities=15% Similarity=0.146 Sum_probs=123.1
Q ss_pred CCceEEEEEcCCcccCCcc-----HHHHHHHhCCChHH----Hhh---cCCCC-hHH------HHHHHHHHHHhCCCCHH
Q 044553 1 MSGIVVIFDFDKTIIDCDS-----DNFVVDELGATDLF----NQL---LPTMP-WNS------LMDRMMKELHSQGKTIE 61 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~----~~~---~~~~~-~~~------~~~~~~~~~~~~~~~~~ 61 (275)
|++++|+||+||||+|+.. +..++..+|.+... ... .+... +.. .+..++..+.. ....+
T Consensus 1 M~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~ 79 (220)
T 2zg6_A 1 MKYKAVLVDFGNTLVGFKPVFYEKVYQVLKDNGYDLDLRKVFRAYAKAMGMINYPDEDGLEHVDPKDFLYILGI-YPSER 79 (220)
T ss_dssp CCCCEEEECSBTTTEEEEETTHHHHHHHHHHTTCCCCHHHHHHHHHHHGGGCCC-----CCCCCHHHHHHHHTC-CCCHH
T ss_pred CCceEEEEcCCCceecccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhhhccCCCccccccccHHHHHHHcCC-CCcHH
Confidence 7789999999999999875 35667777875321 111 11111 100 02334443321 22333
Q ss_pred HHHHHHh------cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeeccc
Q 044553 62 DIVEVLK------RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPF 135 (275)
Q Consensus 62 ~~~~~~~------~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~ 135 (275)
.+..+.. ...++||+.++|+.|+++|++++|+||+.. .++..++++|+..+|+.+++++... ..||.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~~~~~~~~~------~~Kp~ 152 (220)
T 2zg6_A 80 LVKELKEADIRDGEAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDALALSYEIK------AVKPN 152 (220)
T ss_dssp HHHHHHHTTTTCEEEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSEEC-----------------
T ss_pred HHHHHHHHhhcccCceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeEEEeccccC------CCCCC
Confidence 3333322 357899999999999999999999999976 5889999999999999998876431 45776
Q ss_pred CCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCC-CcccccccCCCCeEeecCCchhhHHHhhCCCce
Q 044553 136 HDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSG-DYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLI 214 (275)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~-Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 214 (275)
| .+++.++.+++.. . +||||+.+ |+.+|+++|+..+++.+.+.. +..
T Consensus 153 ~-------------------~~~~~~~~~~~~~---~-~~vgD~~~~Di~~a~~aG~~~i~v~~~~~~--------~~~- 200 (220)
T 2zg6_A 153 P-------------------KIFGFALAKVGYP---A-VHVGDIYELDYIGAKRSYVDPILLDRYDFY--------PDV- 200 (220)
T ss_dssp C-------------------CHHHHHHHHHCSS---E-EEEESSCCCCCCCSSSCSEEEEEBCTTSCC--------TTC-
T ss_pred H-------------------HHHHHHHHHcCCC---e-EEEcCCchHhHHHHHHCCCeEEEECCCCCC--------CCc-
Confidence 6 3555666666543 3 99999998 999999988876666554321 111
Q ss_pred eEEEeeCCChHHHHHHHHHHH
Q 044553 215 KAEIHEWTDGEELEQILLHLV 235 (275)
Q Consensus 215 ~~~~~~~~~~~el~~~l~~~~ 235 (275)
...++++.||.++|.+.+
T Consensus 201 ---~~~i~~l~el~~~l~~~~ 218 (220)
T 2zg6_A 201 ---RDRVKNLREALQKIEEMN 218 (220)
T ss_dssp ---CSCBSSHHHHHHHHHHHC
T ss_pred ---ceEECCHHHHHHHHHHhc
Confidence 125789999998887654
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=5.2e-21 Score=157.02 Aligned_cols=172 Identities=14% Similarity=0.165 Sum_probs=129.2
Q ss_pred CceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcC-----CCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCH
Q 044553 2 SGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLP-----TMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRV 76 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~ 76 (275)
++|+|+||+||||+++++...+.+.++.......... ...+...+......+ .+...+.+........++||+
T Consensus 3 ~~k~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 80 (217)
T 3m1y_A 3 LQKLAVFDFDSTLVNAETIESLARAWGVFDEVKTITLKAMNGETDFHKSLILRVSKL--KNMPLKLAKEVCESLPLFEGA 80 (217)
T ss_dssp CCEEEEEECBTTTBSSCHHHHHHHHTTCHHHHTTCCCC----CCCHHHHHHHHHHTT--TTCBHHHHHHHHTTCCBCBTH
T ss_pred CCcEEEEeCCCCCCCchhHHHHHHHcCchHHHHHHHHHHHcCcCCHHHHHHHHHHHh--cCCCHHHHHHHHhcCcCCCCH
Confidence 4799999999999999998888888887544333222 122333333332222 345677788888889999999
Q ss_pred HHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHH
Q 044553 77 VPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGV 156 (275)
Q Consensus 77 ~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~ 156 (275)
.++|+.|+++|++++|+||+....++..++.+|+..+|+.+++.+. |.+.+....+ ...+.+|..
T Consensus 81 ~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~-----~~~~~~~~~~----------~~~~k~k~~ 145 (217)
T 3m1y_A 81 LELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVEN-----DALNGLVTGH----------MMFSHSKGE 145 (217)
T ss_dssp HHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEET-----TEEEEEEEES----------CCSTTHHHH
T ss_pred HHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeC-----CEEEeeeccC----------CCCCCChHH
Confidence 9999999999999999999999999999999999999998876442 2222221110 012355899
Q ss_pred HHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 157 VIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 157 ~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
+++.++..++.. +++|+||||+.+|+.+|+.+|.
T Consensus 146 ~~~~~~~~~g~~-~~~~i~vGDs~~Di~~a~~aG~ 179 (217)
T 3m1y_A 146 MLLVLQRLLNIS-KTNTLVVGDGANDLSMFKHAHI 179 (217)
T ss_dssp HHHHHHHHHTCC-STTEEEEECSGGGHHHHTTCSE
T ss_pred HHHHHHHHcCCC-HhHEEEEeCCHHHHHHHHHCCC
Confidence 999999998876 5899999999999999977665
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=99.85 E-value=5.5e-22 Score=161.45 Aligned_cols=193 Identities=15% Similarity=0.128 Sum_probs=127.3
Q ss_pred eEEEEEcCCcccCCccHHHHHHHhCCCh-HHHhhcC-CCChHH----HHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHH
Q 044553 4 IVVIFDFDKTIIDCDSDNFVVDELGATD-LFNQLLP-TMPWNS----LMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVV 77 (275)
Q Consensus 4 ~~viFD~DGTL~d~~~~~~~~~~~g~~~-~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~ 77 (275)
++|+||+||||+|++.....+...+... ....... ...... .+..++.... .....+.+.+.+....++||+.
T Consensus 2 k~iiFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 80 (201)
T 2w43_A 2 IILAFDIFGTVLDTSTVIQEFRNKQLEYTWLLTIMGKYVEFEEITKITLRYILKVRG-EESKFDEELNKWKNLKAYEDTK 80 (201)
T ss_dssp CEEEECCBTTTEEGGGSCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHTT-CGGGHHHHHHHHHTCEECGGGG
T ss_pred cEEEEeCCCceecchhHHHHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHhC-ChHHHHHHHHhhcccccCCChH
Confidence 6899999999999876321111111110 0000011 111211 2222222221 1112445555666788999999
Q ss_pred HHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHH
Q 044553 78 PAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVV 157 (275)
Q Consensus 78 e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~ 157 (275)
+ |+.|+++ ++++|+||++...++..++++|+..+|+.+++++... ..|| ++..
T Consensus 81 ~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------~~Kp-------------------~~~~ 133 (201)
T 2w43_A 81 Y-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKGIFSAESVK------EYKP-------------------SPKV 133 (201)
T ss_dssp G-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGT------CCTT-------------------CHHH
T ss_pred H-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcEEEehhhcC------CCCC-------------------CHHH
Confidence 9 9999999 9999999999999999999999999999998876431 3355 3477
Q ss_pred HHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHHHHHH
Q 044553 158 IERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHL 234 (275)
Q Consensus 158 l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~l~~~ 234 (275)
++.++..++ +++|+||||+.+|+.+|+.+|...+++.+++..... +.. .+ ...++++.||.+++.++
T Consensus 134 ~~~~~~~~~---~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~-~~~-----~~-~~~~~~~~el~~~l~~~ 200 (201)
T 2w43_A 134 YKYFLDSIG---AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDP-IGG-----KP-DVIVNDFKELYEWILRY 200 (201)
T ss_dssp HHHHHHHHT---CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCT-TSC-----CC-SEEESSHHHHHHHHHHH
T ss_pred HHHHHHhcC---CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccc-cCC-----CC-CEEECCHHHHHHHHHhc
Confidence 888888876 579999999999999999988876666654332111 111 12 23578999999887653
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.85 E-value=8.2e-22 Score=162.97 Aligned_cols=198 Identities=15% Similarity=0.087 Sum_probs=134.3
Q ss_pred CceEEEEEcCCcccCCccH-HHHHHHhCCChH-H--------------HhhcC-CCChHHH----HHHHHHHHHhCCCCH
Q 044553 2 SGIVVIFDFDKTIIDCDSD-NFVVDELGATDL-F--------------NQLLP-TMPWNSL----MDRMMKELHSQGKTI 60 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~~-~~~~~~~g~~~~-~--------------~~~~~-~~~~~~~----~~~~~~~~~~~~~~~ 60 (275)
++++|+||+||||++++.. ..+.+.++.... . ..... ...+... +...+... +.....
T Consensus 4 ~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 82 (230)
T 3um9_A 4 AIKAVVFDLYGTLYDVYSVRTSCERIFPGQGEMVSKMWRQKQLEYTWMRTLMGQYQDFESATLDALRYTCGSL-GLALDA 82 (230)
T ss_dssp SCCEEEECSBTTTBCGGGGHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHH-TCCCCH
T ss_pred CceEEEEcCCCCcCcchHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhhccccCHHHHHHHHHHHHHHHc-CCCCCH
Confidence 5799999999999998764 334443332210 0 00111 1122222 22222222 122233
Q ss_pred H---HHHHHHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCC
Q 044553 61 E---DIVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHD 137 (275)
Q Consensus 61 ~---~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~ 137 (275)
+ .+...+....++|++.++|+.|+++|++++|+||+....++..++++|+..+|+.+++++... ..||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------~~kp--- 153 (230)
T 3um9_A 83 DGEAHLCSEYLSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVR------LFKP--- 153 (230)
T ss_dssp HHHHHHHHHTTSCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEGGGTT------CCTT---
T ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEehhhcc------cCCC---
Confidence 2 334445678899999999999999999999999999999999999999999999998766421 2344
Q ss_pred CCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEE
Q 044553 138 FTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAE 217 (275)
Q Consensus 138 ~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 217 (275)
|...++.++..++.. +++|++|||+.+|+.+|+.+|...+.+.+++..... +.. .+
T Consensus 154 ----------------~~~~~~~~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~-~~~-----~~- 209 (230)
T 3um9_A 154 ----------------HQKVYELAMDTLHLG-ESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQ-LGV-----VP- 209 (230)
T ss_dssp ----------------CHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCC-SSC-----CC-
T ss_pred ----------------ChHHHHHHHHHhCCC-cccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCcccc-ccC-----CC-
Confidence 458888898888775 589999999999999999999877766654332211 111 12
Q ss_pred EeeCCChHHHHHHHHH
Q 044553 218 IHEWTDGEELEQILLH 233 (275)
Q Consensus 218 ~~~~~~~~el~~~l~~ 233 (275)
...++++.||.++|++
T Consensus 210 ~~~~~~~~el~~~l~~ 225 (230)
T 3um9_A 210 DIVVSDVGVLASRFSP 225 (230)
T ss_dssp SEEESSHHHHHHTCCC
T ss_pred cEEeCCHHHHHHHHHH
Confidence 2367999999887654
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.6e-21 Score=167.10 Aligned_cols=206 Identities=13% Similarity=0.041 Sum_probs=132.3
Q ss_pred ceEEEEEcCCcccCCccH-----HHHHHH-----hCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHH-----
Q 044553 3 GIVVIFDFDKTIIDCDSD-----NFVVDE-----LGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVL----- 67 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~-----~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 67 (275)
+++|+||+||||+++... ...+.. +|+............+...-..+.......+...+++....
T Consensus 57 ~k~i~FDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (282)
T 3nuq_A 57 LKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGLVMFHKVNALEYNRLVDDSLP 136 (282)
T ss_dssp CCEEEECCTTTTSCCCHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHTTTSC
T ss_pred CCEEEEecCCCcccCCccHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHhhhhh
Confidence 589999999999998532 223333 24432211110000000000011111222344555555443
Q ss_pred --hcCCCCCCHHHHHHHHHHcCC--cEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCC
Q 044553 68 --KRIPIHPRVVPAIKSAHALGC--ELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSH 143 (275)
Q Consensus 68 --~~~~~~pg~~e~L~~L~~~g~--~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~ 143 (275)
....++||+.++|+.|+++|+ +++|+||+....++..++.+|+..+|+.+++++... ......||
T Consensus 137 ~~~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~~~~--~~~~~~Kp--------- 205 (282)
T 3nuq_A 137 LQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSR--TDTLVCKP--------- 205 (282)
T ss_dssp GGGTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCCCSS--CSSCCCTT---------
T ss_pred hhhccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEeccCC--CcccCCCc---------
Confidence 237789999999999999999 999999999999999999999999999998776431 11112343
Q ss_pred CCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCC
Q 044553 144 GCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTD 223 (275)
Q Consensus 144 ~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 223 (275)
|..+++.++..++..++++|++|||+.+|+.+|+++|+..+++...+.....+. ..+.+ ...+++
T Consensus 206 ----------~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~----~~~~a-d~vi~s 270 (282)
T 3nuq_A 206 ----------HVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILG----QTPEG-AIVISD 270 (282)
T ss_dssp ----------SHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----C----CCCTT-CEEESS
T ss_pred ----------CHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccc----cCCCC-CEEeCC
Confidence 668999999988876328999999999999999999986555554443211111 01122 236789
Q ss_pred hHHHHHHHHHH
Q 044553 224 GEELEQILLHL 234 (275)
Q Consensus 224 ~~el~~~l~~~ 234 (275)
+.||.++|+++
T Consensus 271 l~el~~~l~~l 281 (282)
T 3nuq_A 271 ILELPHVVSDL 281 (282)
T ss_dssp GGGGGGTSGGG
T ss_pred HHHHHHHhhhh
Confidence 99888776543
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.85 E-value=8.3e-21 Score=157.76 Aligned_cols=172 Identities=15% Similarity=0.159 Sum_probs=116.0
Q ss_pred CceEEEEEcCCcccCCccHH---HHHHHhCCC---hH--------HHh-hcCCCChHHHHHHHHHHHHhCCCCHHHHHHH
Q 044553 2 SGIVVIFDFDKTIIDCDSDN---FVVDELGAT---DL--------FNQ-LLPTMPWNSLMDRMMKELHSQGKTIEDIVEV 66 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~~~---~~~~~~g~~---~~--------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 (275)
++++|+||+||||+|+++.. ..+...+.. .. ... ..+..............+. +.+.+++.+.
T Consensus 3 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~ 80 (232)
T 3fvv_A 3 TRRLALFDLDHTLLPLDSDYQWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEFMLGLLA--AHSPVELAAW 80 (232)
T ss_dssp CCEEEEECCBTTTBSSCHHHHHHHHHHHTTSSSSHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHH--TSCHHHHHHH
T ss_pred CCcEEEEeCCCCCcCCchHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHhc--CCCHHHHHHH
Confidence 46899999999999998742 223333332 00 111 1122334444444433333 4455544432
Q ss_pred H----hc-C--CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCC
Q 044553 67 L----KR-I--PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFT 139 (275)
Q Consensus 67 ~----~~-~--~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~ 139 (275)
. .+ + .++||+.++|+.|+++|++++|+||++...++.+++++|++.+|...+. + .+|.+.++|.++.
T Consensus 81 ~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~----~-~~~~~~g~~~~~~- 154 (232)
T 3fvv_A 81 HEEFMRDVIRPSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPE----Y-RDGRYTGRIEGTP- 154 (232)
T ss_dssp HHHHHHHTTGGGCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEE----E-ETTEEEEEEESSC-
T ss_pred HHHHHHHhhhhhcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceE----E-ECCEEeeeecCCC-
Confidence 2 11 2 6799999999999999999999999999999999999999755543332 2 3455677766431
Q ss_pred CCCCCCCcCCCCCchHHHHHHHHHhhh---cCCCCeEEEEcCCCCCcccccccCC
Q 044553 140 KCSHGCNLCPPNMCKGVVIERIQASLS---KEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 140 ~~~~~~~~~~~~~~K~~~l~~~~~~~~---~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
..+.+|...++.++.+++ .. +++|+|||||.+|+.++..+|.
T Consensus 155 ---------~~~~~K~~~~~~~~~~~~~~~~~-~~~~~~vGDs~~D~~~~~~ag~ 199 (232)
T 3fvv_A 155 ---------SFREGKVVRVNQWLAGMGLALGD-FAESYFYSDSVNDVPLLEAVTR 199 (232)
T ss_dssp ---------SSTHHHHHHHHHHHHHTTCCGGG-SSEEEEEECCGGGHHHHHHSSE
T ss_pred ---------CcchHHHHHHHHHHHHcCCCcCc-hhheEEEeCCHhhHHHHHhCCC
Confidence 012458899999988876 54 5899999999999999977664
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.7e-21 Score=160.06 Aligned_cols=197 Identities=12% Similarity=0.108 Sum_probs=132.5
Q ss_pred CCceEEEEEcCCcccCCccH-----HHHHHHhCCChHHHh---hc------------CCCChH---HHHHHHHHHHHhCC
Q 044553 1 MSGIVVIFDFDKTIIDCDSD-----NFVVDELGATDLFNQ---LL------------PTMPWN---SLMDRMMKELHSQG 57 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~-----~~~~~~~g~~~~~~~---~~------------~~~~~~---~~~~~~~~~~~~~~ 57 (275)
+++|+|+||+||||++++.. ..+++.+|....... +. .+.... .....+.... +
T Consensus 2 ~m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~ 78 (235)
T 2om6_A 2 REVKLVTFDVWNTLLDLNIMLDEFSHQLAKISGLHIKDVANAVIEVRNEIKKMRAQASEDPRKVLTGSQEALAGKL---K 78 (235)
T ss_dssp CCCCEEEECCBTTTBCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHHH---T
T ss_pred CCceEEEEeCCCCCCCcchhHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHhhhhcCCCcchHHHHHHHHHHHh---C
Confidence 04789999999999998652 456677777632111 10 122222 2333333322 2
Q ss_pred CCHHH-------HHHHHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCC---HHHHHHHHHHcCCcCCcceEecCCCccCCC
Q 044553 58 KTIED-------IVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDAN---LFFIETILEHLGIRDCFSEINTNPGFVDEE 127 (275)
Q Consensus 58 ~~~~~-------~~~~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~---~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~ 127 (275)
...+. +........++|++.++|+.|+++|++++++||+. ...++..++.+|+..+|+.+++++...
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~--- 155 (235)
T 2om6_A 79 VDVELVKRATARAILNVDESLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVL--- 155 (235)
T ss_dssp CCHHHHHHHHHHHHHHCCGGGBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHHHT---
T ss_pred CCHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheeccccC---
Confidence 22211 11122223469999999999999999999999999 889999999999999999988765421
Q ss_pred CceeecccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCC-CCcccccccCCCCeEeecCCchhhHH
Q 044553 128 GRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRKNFPLWDL 206 (275)
Q Consensus 128 g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~~~~~~~l 206 (275)
..|| +..+++.++..++.. +++|++|||+. +|+.+|+.+|...+.+.+++. ..++
T Consensus 156 ---~~kp-------------------~~~~~~~~~~~lgi~-~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~-~~~~ 211 (235)
T 2om6_A 156 ---SYKP-------------------RKEMFEKVLNSFEVK-PEESLHIGDTYAEDYQGARKVGMWAVWINQEGD-KVRK 211 (235)
T ss_dssp ---CCTT-------------------CHHHHHHHHHHTTCC-GGGEEEEESCTTTTHHHHHHTTSEEEEECTTCC-SCEE
T ss_pred ---CCCC-------------------CHHHHHHHHHHcCCC-ccceEEECCChHHHHHHHHHCCCEEEEECCCCC-Cccc
Confidence 2344 357888888888766 58999999998 999999998886666554421 1111
Q ss_pred HhhCCCceeEEEeeCCChHHHHHHHHHH
Q 044553 207 IIRNPMLIKAEIHEWTDGEELEQILLHL 234 (275)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~el~~~l~~~ 234 (275)
. ..+ ...++++.||.++|+++
T Consensus 212 ~------~~~-~~~~~~~~el~~~l~~~ 232 (235)
T 2om6_A 212 L------EER-GFEIPSIANLKDVIELI 232 (235)
T ss_dssp E------ETT-EEEESSGGGHHHHHHHT
T ss_pred C------CCC-cchHhhHHHHHHHHHHH
Confidence 0 012 23679999998887654
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=4e-21 Score=163.28 Aligned_cols=205 Identities=13% Similarity=0.041 Sum_probs=136.0
Q ss_pred ceEEEEEcCCcccCCcc-----HHHHHHHhCCChHHH---hh-----------------cCCCChHHHHHHHHHHHH-hC
Q 044553 3 GIVVIFDFDKTIIDCDS-----DNFVVDELGATDLFN---QL-----------------LPTMPWNSLMDRMMKELH-SQ 56 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~~---~~-----------------~~~~~~~~~~~~~~~~~~-~~ 56 (275)
+|+|+||+||||+++.. +..+++.+|...... .. ..+......+...+.... ..
T Consensus 1 ik~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 80 (263)
T 3k1z_A 1 MRLLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQTFHLA 80 (263)
T ss_dssp CCEEEECCBTTTEEESSCHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHSTGGGGGGTCCHHHHHHHHHHHHHHHT
T ss_pred CcEEEEcCCCceeCCCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhhhhccccccccCCCHHHHHHHHHHHHHHHc
Confidence 47999999999999753 456777788752111 00 012233333333332221 11
Q ss_pred C-CCHHHHH----HHH------hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccC
Q 044553 57 G-KTIEDIV----EVL------KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVD 125 (275)
Q Consensus 57 ~-~~~~~~~----~~~------~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~ 125 (275)
+ ...+.+. ..+ ..+.++||+.++|+.|+++|++++|+||+.. .+..+++.+|+..+|+.+++++...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl~~~f~~~~~~~~~~- 158 (263)
T 3k1z_A 81 GVQDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGLREHFDFVLTSEAAG- 158 (263)
T ss_dssp TCCCHHHHHHHHHHHHHHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTCGGGCSCEEEHHHHS-
T ss_pred CCCCHHHHHHHHHHHHHHhcCcccceECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCcHHhhhEEEeecccC-
Confidence 2 2333322 221 1357899999999999999999999999876 4789999999999999988765431
Q ss_pred CCCceeecccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCC-CCcccccccCCCCeEeecCCchhh
Q 044553 126 EEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRKNFPLW 204 (275)
Q Consensus 126 ~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~~~~~~ 204 (275)
..|| +..+++.++..++.. +++|+||||+. +|+.+|+++|+..+++.+......
T Consensus 159 -----~~Kp-------------------~~~~~~~~~~~~g~~-~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~ 213 (263)
T 3k1z_A 159 -----WPKP-------------------DPRIFQEALRLAHME-PVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDP 213 (263)
T ss_dssp -----SCTT-------------------SHHHHHHHHHHHTCC-GGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCH
T ss_pred -----CCCC-------------------CHHHHHHHHHHcCCC-HHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCch
Confidence 3455 347888888888765 58999999996 999999999987666655432221
Q ss_pred -HHHhhCCCceeEEEeeCCChHHHHHHHHHHHHHhcc
Q 044553 205 -DLIIRNPMLIKAEIHEWTDGEELEQILLHLVNTIGS 240 (275)
Q Consensus 205 -~l~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~~~~ 240 (275)
.+....+ ...+.++.||..+|+++.++-..
T Consensus 214 ~~~~~~~a------d~v~~~l~el~~~l~~~~~~~~~ 244 (263)
T 3k1z_A 214 VVRDSVPK------EHILPSLAHLLPALDCLEGSAEN 244 (263)
T ss_dssp HHHHHSCG------GGEESSGGGHHHHHHHHHHC---
T ss_pred hhcccCCC------ceEeCCHHHHHHHHHHHHhcCCC
Confidence 1111111 22579999999999988765433
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=99.85 E-value=5.1e-21 Score=158.56 Aligned_cols=136 Identities=21% Similarity=0.227 Sum_probs=107.0
Q ss_pred HHHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCC
Q 044553 65 EVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHG 144 (275)
Q Consensus 65 ~~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~ 144 (275)
.......++|++.++|+.|+++ ++++|+||+....++..++.+|+..+|+.+++++... ..||
T Consensus 94 ~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~------~~kp---------- 156 (234)
T 3u26_A 94 MSQRYGELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDSITTSEEAG------FFKP---------- 156 (234)
T ss_dssp HHHHHCCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEHHHHT------BCTT----------
T ss_pred HHHhhCCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcceeEeccccC------CCCc----------
Confidence 3445688999999999999999 9999999999999999999999999999988765421 2344
Q ss_pred CCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCC-CCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCC
Q 044553 145 CNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTD 223 (275)
Q Consensus 145 ~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 223 (275)
|...++.++..++.. +++|++|||+. +|+.+|+.+|+..+.+.+++.. .++.. .+ ....++
T Consensus 157 ---------~~~~~~~~~~~~~~~-~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~-~~~~~------~a-~~~~~~ 218 (234)
T 3u26_A 157 ---------HPRIFELALKKAGVK-GEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEK-REFWD------KC-DFIVSD 218 (234)
T ss_dssp ---------SHHHHHHHHHHHTCC-GGGEEEEESCTTTTHHHHHTTTCEEEEECSSSTT-GGGGG------GC-SEEESS
T ss_pred ---------CHHHHHHHHHHcCCC-chhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCc-ccccc------CC-CEeeCC
Confidence 457888888888776 58999999997 9999999988876666655432 22111 12 236799
Q ss_pred hHHHHHHHHHHH
Q 044553 224 GEELEQILLHLV 235 (275)
Q Consensus 224 ~~el~~~l~~~~ 235 (275)
+.||.++++++.
T Consensus 219 ~~el~~~l~~~~ 230 (234)
T 3u26_A 219 LREVIKIVDELN 230 (234)
T ss_dssp THHHHHHHHHHC
T ss_pred HHHHHHHHHHHh
Confidence 999999988764
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=99.85 E-value=2.1e-20 Score=155.08 Aligned_cols=196 Identities=15% Similarity=0.110 Sum_probs=133.3
Q ss_pred CceEEEEEcCCcccCCcc-----HHHHHHHhCCChHHHh--------------h-cCCCChHHHHHHHHHHH-Hh--CCC
Q 044553 2 SGIVVIFDFDKTIIDCDS-----DNFVVDELGATDLFNQ--------------L-LPTMPWNSLMDRMMKEL-HS--QGK 58 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~~~--------------~-~~~~~~~~~~~~~~~~~-~~--~~~ 58 (275)
++|+|+||+||||+++.. +..+++++|.+..... . .+...........+..+ .. ...
T Consensus 6 ~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (238)
T 3ed5_A 6 RYRTLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKMTRDEVVNTRFSALLKEYGYEA 85 (238)
T ss_dssp CCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTTCCC
T ss_pred cCCEEEEcCcCcCcCCchhHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHcCCCC
Confidence 479999999999999864 3457777887622110 0 11112222222222221 11 122
Q ss_pred CHHHHHH----HH-hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeec
Q 044553 59 TIEDIVE----VL-KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIF 133 (275)
Q Consensus 59 ~~~~~~~----~~-~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~k 133 (275)
..+.+.. .. ....++||+.++|+.|++. ++++|+||+....++..++++|+..+|+.+++.+... ..|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------~~k 158 (238)
T 3ed5_A 86 DGALLEQKYRRFLEEGHQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTG------FQK 158 (238)
T ss_dssp CHHHHHHHHHHHHTTCCCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGTT------SCT
T ss_pred cHHHHHHHHHHHHHhcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheEEEecccC------CCC
Confidence 2233322 22 3578999999999999999 9999999999999999999999999999988765421 234
Q ss_pred ccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhh-cCCCCeEEEEcCCC-CCcccccccCCCCeEeecCCchhhHHHhhCC
Q 044553 134 PFHDFTKCSHGCNLCPPNMCKGVVIERIQASLS-KEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRKNFPLWDLIIRNP 211 (275)
Q Consensus 134 p~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~-~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~ 211 (275)
| |...++.++..++ .. +++|++|||+. +|+.+|+.+|...+++.+++.. ....
T Consensus 159 p-------------------~~~~~~~~~~~~g~~~-~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~--~~~~--- 213 (238)
T 3ed5_A 159 P-------------------MKEYFNYVFERIPQFS-AEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKP--NVPE--- 213 (238)
T ss_dssp T-------------------CHHHHHHHHHTSTTCC-GGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCC--CTTC---
T ss_pred C-------------------ChHHHHHHHHHcCCCC-hhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCC--Cccc---
Confidence 4 5688999999887 65 58999999997 9999999988876666544211 1111
Q ss_pred CceeEEEeeCCChHHHHHHHH
Q 044553 212 MLIKAEIHEWTDGEELEQILL 232 (275)
Q Consensus 212 ~~~~~~~~~~~~~~el~~~l~ 232 (275)
..+ ....+++.||.++|+
T Consensus 214 --~~a-d~v~~~~~el~~~l~ 231 (238)
T 3ed5_A 214 --IIP-TYEIRKLEELYHILN 231 (238)
T ss_dssp --CCC-SEEESSGGGHHHHHT
T ss_pred --CCC-CeEECCHHHHHHHHH
Confidence 112 236799999988765
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=99.84 E-value=8.8e-21 Score=161.19 Aligned_cols=134 Identities=10% Similarity=0.025 Sum_probs=101.1
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCc
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNL 147 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~ 147 (275)
....++||+.++|+.|++ +++++|+||++...++..++++|+..+|+.+++++... ..||.|
T Consensus 118 ~~~~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~~~~~~~------~~KP~p----------- 179 (260)
T 2gfh_A 118 QHMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQK------EEKPAP----------- 179 (260)
T ss_dssp HTCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSS------SCTTCH-----------
T ss_pred hcCCCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhheEEecCCCC------CCCCCH-----------
Confidence 457899999999999998 59999999999999999999999999999988766532 346644
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccccccCC-CCeEeecCCchhhHHHhhCCCceeEEEeeCCChH
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSLKLSE-GDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGE 225 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 225 (275)
.++..++.+++.. |++|+||||+ .+|+.+|+++|+ ..+++.+.+. ..... . ..+ ...++++.
T Consensus 180 --------~~~~~~~~~~~~~-~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~-~~~~~---~--~~~-~~~i~~~~ 243 (260)
T 2gfh_A 180 --------SIFYHCCDLLGVQ-PGDCVMVGDTLETDIQGGLNAGLKATVWINKSGR-VPLTS---S--PMP-HYMVSSVL 243 (260)
T ss_dssp --------HHHHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCC-CCSSC---C--CCC-SEEESSGG
T ss_pred --------HHHHHHHHHcCCC-hhhEEEECCCchhhHHHHHHCCCceEEEEcCCCC-CcCcc---c--CCC-CEEECCHH
Confidence 6777888877765 5899999996 999999999888 4555543221 10100 0 112 22578999
Q ss_pred HHHHHHHHHH
Q 044553 226 ELEQILLHLV 235 (275)
Q Consensus 226 el~~~l~~~~ 235 (275)
||..++.++.
T Consensus 244 el~~~l~~~~ 253 (260)
T 2gfh_A 244 ELPALLQSID 253 (260)
T ss_dssp GHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9988876543
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.1e-21 Score=162.15 Aligned_cols=197 Identities=14% Similarity=0.123 Sum_probs=135.8
Q ss_pred CceEEEEEcCCcccCCcc-----HHHHHHHhCCChHHH--hhcCCCChHHHHHHHHHHHHhCCCCHHHHH--------HH
Q 044553 2 SGIVVIFDFDKTIIDCDS-----DNFVVDELGATDLFN--QLLPTMPWNSLMDRMMKELHSQGKTIEDIV--------EV 66 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 66 (275)
++|+|+||+||||+++.. +..+++.+|.+.... ....+.......+.++..+.. ....+++. ..
T Consensus 29 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 107 (250)
T 3l5k_A 29 PVTHLIFDMDGLLLDTERLYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQIIIDVLQL-PMSKEELVEESQTKLKEV 107 (250)
T ss_dssp CCSEEEEETBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHTTCCHHHHHHHHHHHHTC-SSCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEcCCCCcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHhcCCCHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHHHH
Confidence 478999999999999854 356777788753221 222233445555555544421 23333322 23
Q ss_pred HhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHH-cCCcCCcceEecCC--CccCCCCceeecccCCCCCCCC
Q 044553 67 LKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEH-LGIRDCFSEINTNP--GFVDEEGRLRIFPFHDFTKCSH 143 (275)
Q Consensus 67 ~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~-~gl~~~fd~i~~~~--~~~~~~g~~~~kp~~~~~~~~~ 143 (275)
.....++||+.++|+.|+++|++++|+||+....+...+.+ +|+..+|+.+++++ .. ...||.
T Consensus 108 ~~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~------~~~Kp~-------- 173 (250)
T 3l5k_A 108 FPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEV------QHGKPD-------- 173 (250)
T ss_dssp GGGCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTC------CSCTTS--------
T ss_pred hccCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhc------cCCCCC--------
Confidence 45688999999999999999999999999998888877755 58889999988766 32 134554
Q ss_pred CCCcCCCCCchHHHHHHHHHhhhcCC-CCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCC
Q 044553 144 GCNLCPPNMCKGVVIERIQASLSKEG-NKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWT 222 (275)
Q Consensus 144 ~~~~~~~~~~K~~~l~~~~~~~~~~~-~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 222 (275)
..+++.++..++..+ |++|++|||+.+|+.+|+.+|+..+++..++... . .... + ....+
T Consensus 174 -----------~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~-~-~~~~-----a-d~v~~ 234 (250)
T 3l5k_A 174 -----------PDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSR-D-LTTK-----A-TLVLN 234 (250)
T ss_dssp -----------THHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCG-G-GSTT-----S-SEECS
T ss_pred -----------hHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCch-h-hccc-----c-cEeec
Confidence 478888888887652 3899999999999999999888766666554321 1 1111 1 22568
Q ss_pred ChHHHHHHHH
Q 044553 223 DGEELEQILL 232 (275)
Q Consensus 223 ~~~el~~~l~ 232 (275)
++.||...+.
T Consensus 235 sl~el~~~l~ 244 (250)
T 3l5k_A 235 SLQDFQPELF 244 (250)
T ss_dssp CGGGCCGGGG
T ss_pred CHHHhhHHHh
Confidence 8888765443
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.5e-21 Score=161.88 Aligned_cols=202 Identities=15% Similarity=0.132 Sum_probs=130.7
Q ss_pred CceEEEEEcCCcccCCcc-----HHHHHHHhCCChHHHhh---c-----------CCCChHHHHHHHHHHHH-hCC--CC
Q 044553 2 SGIVVIFDFDKTIIDCDS-----DNFVVDELGATDLFNQL---L-----------PTMPWNSLMDRMMKELH-SQG--KT 59 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~~~~---~-----------~~~~~~~~~~~~~~~~~-~~~--~~ 59 (275)
++++|+||+||||+++.. +..+++.+|.+...... . ....+.......+..+. ..+ ..
T Consensus 5 ~~k~i~fD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (240)
T 3smv_A 5 DFKALTFDCYGTLIDWETGIVNALQPLAKRTGKTFTSDELLEVFGRNESPQQTETPGALYQDILRAVYDRIAKEWGLEPD 84 (240)
T ss_dssp GCSEEEECCBTTTBCHHHHHHHHTHHHHHHHTCCCCHHHHHHHHHHHHGGGCCSSCCSCHHHHHHHHHHHHHHHTTCCCC
T ss_pred cceEEEEeCCCcCcCCchhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCChhHHHHHHHHHHHHHhCCCCC
Confidence 379999999999999864 35677778876211110 0 01223333333333221 112 22
Q ss_pred HHH---HHHHHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccC
Q 044553 60 IED---IVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFH 136 (275)
Q Consensus 60 ~~~---~~~~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~ 136 (275)
.+. +........++|++.++|+.|++ |++++|+||+....+...++. +..+|+.+++++... ..||+|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~--l~~~fd~i~~~~~~~------~~KP~~ 155 (240)
T 3smv_A 85 AAEREEFGTSVKNWPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAK--LGVEFDHIITAQDVG------SYKPNP 155 (240)
T ss_dssp HHHHHHHHTGGGGCCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTT--TCSCCSEEEEHHHHT------SCTTSH
T ss_pred HHHHHHHHHHHhcCCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHh--cCCccCEEEEccccC------CCCCCH
Confidence 222 22334567899999999999999 799999999999999888887 557899998876432 346655
Q ss_pred CCCCCCCCCCcCCCCCchHHHHHHH---HHhhhcCCCCeEEEEcCCC-CCcccccccCCCCeEeecC----CchhhHHHh
Q 044553 137 DFTKCSHGCNLCPPNMCKGVVIERI---QASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRK----NFPLWDLII 208 (275)
Q Consensus 137 ~~~~~~~~~~~~~~~~~K~~~l~~~---~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~----~~~~~~l~~ 208 (275)
.+++.. +..++.. +++|++|||+. +|+.+|+.+|...+.+.+. +++.. .
T Consensus 156 -------------------~~~~~~l~~~~~lgi~-~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~---~ 212 (240)
T 3smv_A 156 -------------------NNFTYMIDALAKAGIE-KKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGAT---H 212 (240)
T ss_dssp -------------------HHHHHHHHHHHHTTCC-GGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC----------C
T ss_pred -------------------HHHHHHHHHHHhcCCC-chhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCC---C
Confidence 333333 6666665 58999999996 9999999999876666543 11100 0
Q ss_pred hCCCceeEEEeeCCChHHHHHHHHHHHH
Q 044553 209 RNPMLIKAEIHEWTDGEELEQILLHLVN 236 (275)
Q Consensus 209 ~~~~~~~~~~~~~~~~~el~~~l~~~~~ 236 (275)
.......+ ....+++.||.++|+++++
T Consensus 213 ~~~~~~~a-d~v~~~~~el~~~l~~~l~ 239 (240)
T 3smv_A 213 VPSRMPNV-DFRFNSMGEMAEAHKQALK 239 (240)
T ss_dssp CCSSCCCC-SEEESSHHHHHHHHHHHHH
T ss_pred CCcCCCCC-CEEeCCHHHHHHHHHHHhc
Confidence 00011122 2367999999999988763
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.84 E-value=4.7e-22 Score=162.62 Aligned_cols=191 Identities=13% Similarity=0.132 Sum_probs=126.2
Q ss_pred CCceEEEEEcCCcccCCccH-----HHHHHHhCCChHH---HhhcCCCChHHHHHHHHHHHHhCCCCHH----HHHHHH-
Q 044553 1 MSGIVVIFDFDKTIIDCDSD-----NFVVDELGATDLF---NQLLPTMPWNSLMDRMMKELHSQGKTIE----DIVEVL- 67 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~-----~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~- 67 (275)
|++++|+||+||||++++.. ..+++.+|.+... .... +......++. +........ .+....
T Consensus 2 M~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 76 (209)
T 2hdo_A 2 MTYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTF-PMAAEQAMTE----LGIAASEFDHFQAQYEDVMA 76 (209)
T ss_dssp CCCSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCHHHHHHHT-TSCHHHHHHH----TTCCGGGHHHHHHHHHHHHT
T ss_pred CcccEEEEcCCCCCcCCHHHHHHHHHHHHHHhCCCCCHHHHHHHc-CCcHHHHHHH----cCCCHHHHHHHHHHHHHHHh
Confidence 77899999999999999752 4456666663211 1111 2222222221 110000111 111111
Q ss_pred ---hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCC
Q 044553 68 ---KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHG 144 (275)
Q Consensus 68 ---~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~ 144 (275)
....++||+.++|+.|+++ ++++|+||++...++..++++|+..+|+.+++++... ..||.|
T Consensus 77 ~~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------~~KP~~-------- 141 (209)
T 2hdo_A 77 SHYDQIELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTP------KRKPDP-------- 141 (209)
T ss_dssp TCGGGCEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSS------CCTTSS--------
T ss_pred hhcccCCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhccEEEecCcCC------CCCCCc--------
Confidence 4577899999999999999 9999999999999999999999999999998766421 346644
Q ss_pred CCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCCh
Q 044553 145 CNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDG 224 (275)
Q Consensus 145 ~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 224 (275)
..++.++..++.. +++|++|||+.+|+.+|+.+|...+.+.++......+ .. + ....+++
T Consensus 142 -----------~~~~~~~~~~~~~-~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~-~~------a-~~~~~~~ 201 (209)
T 2hdo_A 142 -----------LPLLTALEKVNVA-PQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADH-QK------V-AHRFQKP 201 (209)
T ss_dssp -----------HHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGG-SC------C-SEEESSG
T ss_pred -----------HHHHHHHHHcCCC-cccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhh-cc------C-CEEeCCH
Confidence 6777888887765 5899999999999999998887655544332211221 11 1 2246788
Q ss_pred HHHHHHH
Q 044553 225 EELEQIL 231 (275)
Q Consensus 225 ~el~~~l 231 (275)
.||.++|
T Consensus 202 ~el~~~l 208 (209)
T 2hdo_A 202 LDILELF 208 (209)
T ss_dssp GGGGGGC
T ss_pred HHHHHhh
Confidence 8776543
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.4e-20 Score=156.23 Aligned_cols=196 Identities=13% Similarity=0.103 Sum_probs=133.1
Q ss_pred CCceEEEEEcCCcccCCcc-----HHHHHHHhCCCh---HHHhh---------------c-CCCChHHHHHHHHHHH-Hh
Q 044553 1 MSGIVVIFDFDKTIIDCDS-----DNFVVDELGATD---LFNQL---------------L-PTMPWNSLMDRMMKEL-HS 55 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~---~~~~~---------------~-~~~~~~~~~~~~~~~~-~~ 55 (275)
|++|+|+||+||||+++.. +..+++++|.+. ..... . +...........+... ..
T Consensus 3 m~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (240)
T 3qnm_A 3 LKYKNLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFFYPLQA 82 (240)
T ss_dssp CCCSEEEECCBTTTBCHHHHHHHHHHHHHHHTTGGGTSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred CCceEEEEcCCCCCcCchhhHHHHHHHHHHHcCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 5689999999999999865 245677777653 11111 0 1122222222222221 11
Q ss_pred CCCC-HH---HHHH-----HHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCC
Q 044553 56 QGKT-IE---DIVE-----VLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDE 126 (275)
Q Consensus 56 ~~~~-~~---~~~~-----~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~ 126 (275)
.+.. .+ .+.. ......++|++.++|+.|+ +|++++|+||+....++..++.+|+..+|+.+++.+...
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~~~~~~~-- 159 (240)
T 3qnm_A 83 VGVEDEALAERFSEDFFAIIPTKSGLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDLG-- 159 (240)
T ss_dssp TTCCCHHHHHHHHHHHHHHGGGCCCBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGTT--
T ss_pred cCCCcHHHHHHHHHHHHHHhhhcCCcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeEEEeccCC--
Confidence 2222 11 1111 1245789999999999999 999999999999999999999999999999998765421
Q ss_pred CCceeecccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCC-CCcccccccCCCCeEeecCCchhhH
Q 044553 127 EGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRKNFPLWD 205 (275)
Q Consensus 127 ~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~~~~~~~ 205 (275)
..|| |..+++.++..++.. +++|++|||+. +|+.+|+.+|+..+.+.+... .
T Consensus 160 ----~~kp-------------------~~~~~~~~~~~lgi~-~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~---~ 212 (240)
T 3qnm_A 160 ----VLKP-------------------RPEIFHFALSATQSE-LRESLMIGDSWEADITGAHGVGMHQAFYNVTER---T 212 (240)
T ss_dssp ----CCTT-------------------SHHHHHHHHHHTTCC-GGGEEEEESCTTTTHHHHHHTTCEEEEECCSCC---C
T ss_pred ----CCCC-------------------CHHHHHHHHHHcCCC-cccEEEECCCchHhHHHHHHcCCeEEEEcCCCC---C
Confidence 2344 568899999988876 58999999995 999999999987666655432 1
Q ss_pred HHhhCCCceeEEEeeCCChHHHHHHHH
Q 044553 206 LIIRNPMLIKAEIHEWTDGEELEQILL 232 (275)
Q Consensus 206 l~~~~~~~~~~~~~~~~~~~el~~~l~ 232 (275)
.... .+ ....+++.|+..+.+
T Consensus 213 ~~~~-----~~-d~vi~sl~e~~~~~~ 233 (240)
T 3qnm_A 213 VFPF-----QP-TYHIHSLKELMNLLE 233 (240)
T ss_dssp CCSS-----CC-SEEESSTHHHHHHTC
T ss_pred CcCC-----CC-ceEECCHHHHHHHHh
Confidence 1111 12 336799999987754
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.8e-21 Score=156.50 Aligned_cols=142 Identities=15% Similarity=0.202 Sum_probs=107.4
Q ss_pred CCceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHHH
Q 044553 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAI 80 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L 80 (275)
|+.++|+||+||||++..... .... +........++||+.++|
T Consensus 1 m~ik~vifD~DgtL~~~~~~~---------------y~~~----------------------~~~~~~~~~~~~g~~~~L 43 (189)
T 3ib6_A 1 MSLTHVIWDMGETLNTVPNTR---------------YDHH----------------------PLDTYPEVVLRKNAKETL 43 (189)
T ss_dssp --CCEEEECTBTTTBCCCTTS---------------SCSS----------------------CGGGCTTCCBCTTHHHHH
T ss_pred CCceEEEEcCCCceeeccchh---------------hhhH----------------------HHhccCCceeCcCHHHHH
Confidence 788999999999998853200 0000 000114578999999999
Q ss_pred HHHHHcCCcEEEEeCCCH---HHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHH
Q 044553 81 KSAHALGCELRIVSDANL---FFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVV 157 (275)
Q Consensus 81 ~~L~~~g~~~~IvS~~~~---~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~ 157 (275)
+.|+++|++++|+||++. ..++..++++|+..+|+.+++++...... ...||.| .+
T Consensus 44 ~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~--~~~KP~p-------------------~~ 102 (189)
T 3ib6_A 44 EKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPG--KMEKPDK-------------------TI 102 (189)
T ss_dssp HHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSSTT--CCCTTSH-------------------HH
T ss_pred HHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEcccccccc--CCCCcCH-------------------HH
Confidence 999999999999999887 89999999999999999999877532111 1345544 77
Q ss_pred HHHHHHhhhcCCCCeEEEEcCC-CCCcccccccCCCCeEeecCCc
Q 044553 158 IERIQASLSKEGNKKIIYLGDG-SGDYCPSLKLSEGDHVMPRKNF 201 (275)
Q Consensus 158 l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~~~~~~~~~~~~~ 201 (275)
++.++.+++.. +++|+||||+ .+|+.+|+++|+..+++.+...
T Consensus 103 ~~~~~~~~~~~-~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~ 146 (189)
T 3ib6_A 103 FDFTLNALQID-KTEAVMVGNTFESDIIGANRAGIHAIWLQNPEV 146 (189)
T ss_dssp HHHHHHHHTCC-GGGEEEEESBTTTTHHHHHHTTCEEEEECCTTT
T ss_pred HHHHHHHcCCC-cccEEEECCCcHHHHHHHHHCCCeEEEECCccc
Confidence 78888887765 5899999999 7999999999998777766543
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=99.84 E-value=4.1e-21 Score=159.34 Aligned_cols=138 Identities=15% Similarity=0.176 Sum_probs=103.3
Q ss_pred HHHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCC
Q 044553 65 EVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHG 144 (275)
Q Consensus 65 ~~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~ 144 (275)
..+....++||+.++|+.|+++|++++|+||+....++..++++|+..+|+.+++++... ..||
T Consensus 89 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------~~Kp---------- 152 (232)
T 1zrn_A 89 DAYLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQ------VYKP---------- 152 (232)
T ss_dssp HGGGGCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGT------CCTT----------
T ss_pred HHHccCCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEEecccC------CCCC----------
Confidence 334567899999999999999999999999999999999999999999999998776431 3455
Q ss_pred CCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCCh
Q 044553 145 CNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDG 224 (275)
Q Consensus 145 ~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 224 (275)
|...++.++..++.. +++|+||||+.+|+.+|+.+|...+.+.+.+..... .. ..+ ...++++
T Consensus 153 ---------~~~~~~~~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~-~~-----~~~-~~~~~~~ 215 (232)
T 1zrn_A 153 ---------DNRVYELAEQALGLD-RSAILFVASNAWDATGARYFGFPTCWINRTGNVFEE-MG-----QTP-DWEVTSL 215 (232)
T ss_dssp ---------SHHHHHHHHHHHTSC-GGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCS-SS-----CCC-SEEESSH
T ss_pred ---------CHHHHHHHHHHcCCC-cccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccc-cC-----CCC-CEEECCH
Confidence 347778888887765 589999999999999999999877766554321111 10 112 2257899
Q ss_pred HHHHHHHHHHH
Q 044553 225 EELEQILLHLV 235 (275)
Q Consensus 225 ~el~~~l~~~~ 235 (275)
.||..++.+..
T Consensus 216 ~el~~~l~~~~ 226 (232)
T 1zrn_A 216 RAVVELFETAA 226 (232)
T ss_dssp HHHHTTC----
T ss_pred HHHHHHHHhhc
Confidence 99988776543
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.9e-21 Score=156.84 Aligned_cols=169 Identities=9% Similarity=0.032 Sum_probs=118.3
Q ss_pred CCceEEEEEcCCcccCCcc----HHHHHHHhCCChHHHhhc----------CCCChHHHHHHHHHHHHhCCCCHHHHHHH
Q 044553 1 MSGIVVIFDFDKTIIDCDS----DNFVVDELGATDLFNQLL----------PTMPWNSLMDRMMKELHSQGKTIEDIVEV 66 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~----~~~~~~~~g~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 (275)
|++++|+||+||||++++. +..+++.+|.+....... ........+....... ......+.+.+.
T Consensus 2 M~~k~viFDlDGTL~d~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 80 (200)
T 3cnh_A 2 MTIKALFWDIGGVLLTNGWDREQRADVAQRFGLDTDDFTERHRLAAPELELGRMTLAEYLEQVVFYQ-PRDFTPEDFRAV 80 (200)
T ss_dssp CCCCEEEECCBTTTBCCSSCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTTSSCHHHHHHHHTTTS-CCSSCHHHHHHH
T ss_pred CCceEEEEeCCCeeECCCcchHHHHHHHHHcCCCHHHHHHHHHhhchHHHcCCcCHHHHHHHHHHHc-CCCCCHHHHHHH
Confidence 6689999999999999764 345677788763221110 1112222222221110 012234444443
Q ss_pred -HhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCC
Q 044553 67 -LKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGC 145 (275)
Q Consensus 67 -~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~ 145 (275)
.....++||+.++|+.|+++| +++|+||++...++..++++|+..+|+.+++++... ..||.
T Consensus 81 ~~~~~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~------~~Kp~---------- 143 (200)
T 3cnh_A 81 MEEQSQPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLLAFFTSSALG------VMKPN---------- 143 (200)
T ss_dssp HHHTCCBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCSCEEEHHHHS------CCTTC----------
T ss_pred HHhcCccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcceEEeecccC------CCCCC----------
Confidence 456779999999999999999 999999999999999999999999999888765421 34554
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEee
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMP 197 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~ 197 (275)
...++.++..++.. +++|+||||+.+|+.+|+.+|+..+.+.
T Consensus 144 ---------~~~~~~~~~~~~~~-~~~~~~vgD~~~Di~~a~~aG~~~~~~~ 185 (200)
T 3cnh_A 144 ---------PAMYRLGLTLAQVR-PEEAVMVDDRLQNVQAARAVGMHAVQCV 185 (200)
T ss_dssp ---------HHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHTTCEEEECS
T ss_pred ---------HHHHHHHHHHcCCC-HHHeEEeCCCHHHHHHHHHCCCEEEEEC
Confidence 36777888877765 5899999999999999998887655443
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=99.83 E-value=3.8e-20 Score=156.82 Aligned_cols=175 Identities=13% Similarity=0.032 Sum_probs=117.0
Q ss_pred CCceEEEEEcCCcccCCcc-H-----HHHHHHhCCChHHHhhcC--CCChHHHHHHHH---------HHHHhCCCCHHHH
Q 044553 1 MSGIVVIFDFDKTIIDCDS-D-----NFVVDELGATDLFNQLLP--TMPWNSLMDRMM---------KELHSQGKTIEDI 63 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~-~-----~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~---------~~~~~~~~~~~~~ 63 (275)
|++|+|+||+||||++++. . ..+++++|.+........ +........... ........+.+.+
T Consensus 4 m~ik~i~fDlDGTLld~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (267)
T 1swv_A 4 MKIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEADI 83 (267)
T ss_dssp -CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCCCCHHHHHTTTTSCHHHHHHHHHHSHHHHHHHHHHHSSCCCHHHH
T ss_pred CCceEEEEecCCCEEeCCCccHHHHHHHHHHHcCCCCCHHHHHHHhccchHHHHHHhcccHHHHHHHHHHhCCCCCHHHH
Confidence 3479999999999999865 2 445666776532222211 222222221111 1111222222221
Q ss_pred H-------H-----HHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCc-ceEecCCCccCCCCce
Q 044553 64 V-------E-----VLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCF-SEINTNPGFVDEEGRL 130 (275)
Q Consensus 64 ~-------~-----~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~f-d~i~~~~~~~~~~g~~ 130 (275)
. . ......++|++.++|+.|+++|++++++||+....+..+++.+|+..+| +.+++.+...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~------ 157 (267)
T 1swv_A 84 QEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVP------ 157 (267)
T ss_dssp HHHHHHHHHHHHHHGGGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSS------
T ss_pred HHHHHHHHHHHHHhhccccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHheecCCccC------
Confidence 1 1 1234678999999999999999999999999999999999999888775 7777654321
Q ss_pred eecccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCC
Q 044553 131 RIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKN 200 (275)
Q Consensus 131 ~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~ 200 (275)
..|| |+..++.++..++..++++|++|||+.+|+.+++.+|...+++..++
T Consensus 158 ~~kp-------------------~~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~ 208 (267)
T 1swv_A 158 AGRP-------------------YPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGS 208 (267)
T ss_dssp CCTT-------------------SSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTC
T ss_pred CCCC-------------------CHHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCC
Confidence 2343 45788888888876533799999999999999998887666666543
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.83 E-value=3.8e-20 Score=152.05 Aligned_cols=195 Identities=20% Similarity=0.203 Sum_probs=131.5
Q ss_pred ceEEEEEcCCcccCCccH-----HHHHHHhCCChHHHhhcC---CCChHHHHHHHHHHHHhCCCCHHHHH--------H-
Q 044553 3 GIVVIFDFDKTIIDCDSD-----NFVVDELGATDLFNQLLP---TMPWNSLMDRMMKELHSQGKTIEDIV--------E- 65 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~-----~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--------~- 65 (275)
+|+|+||+||||++++.. ..+++.+|.+........ +.....................+++. +
T Consensus 9 ~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (226)
T 1te2_A 9 ILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAISL 88 (226)
T ss_dssp CCEEEECCBTTTBCCHHHHHHHHHHHHHHTTCCGGGGGGSCCCTTCCHHHHHHHHHHHSCCSSSCHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCcCcCHHHHHHHHHHHHHHcCCCCChHHHHHHHhCCCHHHHHHHHHHHcCCCccCHHHHHHHHHHHHHHH
Confidence 689999999999998653 456777887644222221 22333333333322111112232221 1
Q ss_pred HHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCC
Q 044553 66 VLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGC 145 (275)
Q Consensus 66 ~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~ 145 (275)
......++|++.++|+.|++.|++++++||+....++..++.+|+..+|+.+++.+... ..||
T Consensus 89 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~------~~kp----------- 151 (226)
T 1te2_A 89 VEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLP------YSKP----------- 151 (226)
T ss_dssp HHHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSS------CCTT-----------
T ss_pred HhccCCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEeccccC------CCCC-----------
Confidence 23457899999999999999999999999999999999999999999999888765421 2344
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChH
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGE 225 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 225 (275)
|...++.++..++.. ++++++|||+.+|+.+++.+|...+.+.+.+..... +... + ...+.++.
T Consensus 152 --------~~~~~~~~~~~~~i~-~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~-~~~~-----a-~~v~~~~~ 215 (226)
T 1te2_A 152 --------HPQVYLDCAAKLGVD-PLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDP-RFVL-----A-NVKLSSLT 215 (226)
T ss_dssp --------STHHHHHHHHHHTSC-GGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCG-GGGG-----S-SEECSCGG
T ss_pred --------ChHHHHHHHHHcCCC-HHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccc-cccc-----c-CeEECCHH
Confidence 347888888888765 489999999999999999888765555443322211 1111 1 23578888
Q ss_pred HHHHH
Q 044553 226 ELEQI 230 (275)
Q Consensus 226 el~~~ 230 (275)
||.+.
T Consensus 216 el~~~ 220 (226)
T 1te2_A 216 ELTAK 220 (226)
T ss_dssp GCCHH
T ss_pred HHhHH
Confidence 87653
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=99.83 E-value=6.9e-21 Score=156.39 Aligned_cols=198 Identities=15% Similarity=0.098 Sum_probs=127.2
Q ss_pred CCceEEEEEcCCcccCCcc-----HHHHHHHhCCChH-HHhh--cCCCChHHHHHHHHHHHHhCCCCHH---H-------
Q 044553 1 MSGIVVIFDFDKTIIDCDS-----DNFVVDELGATDL-FNQL--LPTMPWNSLMDRMMKELHSQGKTIE---D------- 62 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---~------- 62 (275)
|++|+|+||+||||++++. +..+++.+|.+.. .... ..+..........+ ... ..+ .
T Consensus 4 M~~k~v~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~ 78 (225)
T 3d6j_A 4 MKYTVYLFDFDYTLADSSRGIVTCFRSVLERHGYTGITDDMIKRTIGKTLEESFSILT----GIT-DADQLESFRQEYSK 78 (225)
T ss_dssp -CCSEEEECCBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHTTTTSCHHHHHHHHH----CCC-CHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCCCCCHHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCcHHHHHHHHc----CCC-CHHHHHHHHHHHHH
Confidence 6679999999999999864 3556777776521 1111 11222232222221 111 111 1
Q ss_pred -HHHH-HhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCC
Q 044553 63 -IVEV-LKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTK 140 (275)
Q Consensus 63 -~~~~-~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~ 140 (275)
+... .....++|++.++++.|+++|++++++||+....++..++.+|+..+|+.+++.+... ..||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~k~------ 146 (225)
T 3d6j_A 79 EADIYMNANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVT------HHKP------ 146 (225)
T ss_dssp HHHHHTGGGCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEEECGGGCS------SCTT------
T ss_pred HHHHhccccCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeeeeehhhcC------CCCC------
Confidence 1111 2346789999999999999999999999999999999999999999999888765321 2233
Q ss_pred CCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEee
Q 044553 141 CSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHE 220 (275)
Q Consensus 141 ~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 220 (275)
|...++.++..++.. ++++++|||+.+|+.+++.+|...+.+.++......+.... + ...
T Consensus 147 -------------~~~~~~~~~~~~~~~-~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~-----a-d~v 206 (225)
T 3d6j_A 147 -------------DPEGLLLAIDRLKAC-PEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYP-----Y-DRI 206 (225)
T ss_dssp -------------STHHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSC-----C-SEE
T ss_pred -------------ChHHHHHHHHHhCCC-hHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcC-----C-CEE
Confidence 447788888888765 58999999999999999988876555544332222222111 1 225
Q ss_pred CCChHHHHHHHHHHH
Q 044553 221 WTDGEELEQILLHLV 235 (275)
Q Consensus 221 ~~~~~el~~~l~~~~ 235 (275)
..++.||.++++++.
T Consensus 207 ~~~~~el~~~l~~~~ 221 (225)
T 3d6j_A 207 ISTLGQLISVPEDKS 221 (225)
T ss_dssp ESSGGGGC-------
T ss_pred ECCHHHHHHhhhhhc
Confidence 688999988887654
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.83 E-value=5.1e-20 Score=153.93 Aligned_cols=133 Identities=15% Similarity=0.091 Sum_probs=101.6
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcC
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLC 148 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~ 148 (275)
...++||+.++|+.|+++|++++|+||+....++..++++|+..+|+.+++++... ..||
T Consensus 92 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------~~Kp-------------- 151 (241)
T 2hoq_A 92 YLREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFEG------VKKP-------------- 151 (241)
T ss_dssp HCCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGGT------CCTT--------------
T ss_pred hCCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEEEeCCCC------CCCC--------------
Confidence 47789999999999999999999999999999999999999999999998765421 2354
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCC-CCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHH
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEEL 227 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el 227 (275)
|..+++.++..++.. +++|+||||+. +|+.+|+.+|+..+++ ..+......... ...+ ...++++.||
T Consensus 152 -----~~~~~~~~~~~~g~~-~~~~i~iGD~~~~Di~~a~~aG~~~~~v-~~g~~~~~~~~~-~~~~---~~~i~~~~el 220 (241)
T 2hoq_A 152 -----HPKIFKKALKAFNVK-PEEALMVGDRLYSDIYGAKRVGMKTVWF-RYGKHSERELEY-RKYA---DYEIDNLESL 220 (241)
T ss_dssp -----CHHHHHHHHHHHTCC-GGGEEEEESCTTTTHHHHHHTTCEEEEE-CCSCCCHHHHTT-GGGC---SEEESSTTHH
T ss_pred -----CHHHHHHHHHHcCCC-cccEEEECCCchHhHHHHHHCCCEEEEE-CCCCCCcccccc-cCCC---CEEECCHHHH
Confidence 447888888888765 58999999998 9999999988876666 344322111110 0011 2257899999
Q ss_pred HHHHH
Q 044553 228 EQILL 232 (275)
Q Consensus 228 ~~~l~ 232 (275)
..++.
T Consensus 221 ~~~l~ 225 (241)
T 2hoq_A 221 LEVLA 225 (241)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87765
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.83 E-value=7.7e-21 Score=155.05 Aligned_cols=135 Identities=10% Similarity=-0.037 Sum_probs=97.2
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCc
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNL 147 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~ 147 (275)
....++||+.++|++|+++|++++|+||.....+...+ + .+|+.+++++... ..||.|
T Consensus 33 ~~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~---~--~~~d~v~~~~~~~------~~KP~p----------- 90 (196)
T 2oda_A 33 EHAQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA---A--PVNDWMIAAPRPT------AGWPQP----------- 90 (196)
T ss_dssp GGGSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH---T--TTTTTCEECCCCS------SCTTST-----------
T ss_pred ccCCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc---C--ccCCEEEECCcCC------CCCCCh-----------
Confidence 45678999999999999999999999999887774433 3 4678888766532 457766
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCch-----------------------hh
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFP-----------------------LW 204 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~-----------------------~~ 204 (275)
..+...+.+++..++++|+||||+.+|+.+|+++|+..+++..+... ..
T Consensus 91 --------~~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 162 (196)
T 2oda_A 91 --------DACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATL 162 (196)
T ss_dssp --------HHHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHH
Confidence 56667777776654478999999999999999999877766544321 01
Q ss_pred HHHhhCCCceeEEEeeCCChHHHHHHHHHHHHHh
Q 044553 205 DLIIRNPMLIKAEIHEWTDGEELEQILLHLVNTI 238 (275)
Q Consensus 205 ~l~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~~ 238 (275)
.+....+ ...++++.||.++|..+..+.
T Consensus 163 ~l~~~~~------d~vi~~~~eL~~~l~~~~~~~ 190 (196)
T 2oda_A 163 KLYSLGV------HSVIDHLGELESCLADIALRR 190 (196)
T ss_dssp HHHHTTC------SEEESSGGGHHHHHHHHHHHH
T ss_pred HHHHcCC------CEEeCCHHHHHHHHHHHHHHh
Confidence 1111111 225799999999887765543
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.82 E-value=6.5e-21 Score=154.21 Aligned_cols=188 Identities=15% Similarity=0.152 Sum_probs=126.0
Q ss_pred CCceEEEEEcCCcccCCccH-----HHHHHHhCCChHH---HhhcCCCChHHHHHHHHHHHHhCCCCHH---HHHHH---
Q 044553 1 MSGIVVIFDFDKTIIDCDSD-----NFVVDELGATDLF---NQLLPTMPWNSLMDRMMKELHSQGKTIE---DIVEV--- 66 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~-----~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--- 66 (275)
|++|+|+||+||||++++.. ..+++.+|..... ....+........+.+... ...+.+ .+...
T Consensus 2 M~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 78 (207)
T 2go7_A 2 MQKTAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAED---RNLDVEVLNQVRAQSLA 78 (207)
T ss_dssp --CCEEEECTBTTTEECHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHSCHHHHHHHHHHH---HTCCHHHHHHHHHHHHT
T ss_pred CcccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHHccccHHHHHHHhhch---hhccHHHHHHHHHHHHH
Confidence 67899999999999998652 4566777764211 1111102233333322211 112111 12222
Q ss_pred --HhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCC
Q 044553 67 --LKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHG 144 (275)
Q Consensus 67 --~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~ 144 (275)
.....++|++.++|+.|+++|++++++||+....+. .++.+|+..+|+.+++.+... ..||.
T Consensus 79 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~------~~Kp~--------- 142 (207)
T 2go7_A 79 EKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFTEILTSQSGF------VRKPS--------- 142 (207)
T ss_dssp TCGGGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEEEEECGGGCC------CCTTS---------
T ss_pred hccccceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhheeeEEecCcCC------CCCCC---------
Confidence 134678999999999999999999999999988888 999999999999888765421 23443
Q ss_pred CCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCCh
Q 044553 145 CNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDG 224 (275)
Q Consensus 145 ~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 224 (275)
...++.++..++.. ++++++|||+.+|+.+++.+|...+++..+ .. . + ...++++
T Consensus 143 ----------~~~~~~~~~~~~i~-~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~-~~-------~-----a-~~v~~~~ 197 (207)
T 2go7_A 143 ----------PEAATYLLDKYQLN-SDNTYYIGDRTLDVEFAQNSGIQSINFLES-TY-------E-----G-NHRIQAL 197 (207)
T ss_dssp ----------SHHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEESSCC-SC-------T-----T-EEECSST
T ss_pred ----------cHHHHHHHHHhCCC-cccEEEECCCHHHHHHHHHCCCeEEEEecC-CC-------C-----C-CEEeCCH
Confidence 36777888887765 589999999999999998888755554432 21 1 1 3367899
Q ss_pred HHHHHHHH
Q 044553 225 EELEQILL 232 (275)
Q Consensus 225 ~el~~~l~ 232 (275)
.||.++++
T Consensus 198 ~el~~~l~ 205 (207)
T 2go7_A 198 ADISRIFE 205 (207)
T ss_dssp THHHHHTS
T ss_pred HHHHHHHh
Confidence 99887653
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.82 E-value=3e-20 Score=162.39 Aligned_cols=202 Identities=18% Similarity=0.189 Sum_probs=141.9
Q ss_pred ceEEEEEcCCcccCCccHHHHHHHhCCChHHH----hhc-CCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHH
Q 044553 3 GIVVIFDFDKTIIDCDSDNFVVDELGATDLFN----QLL-PTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVV 77 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~ 77 (275)
+++|+||+||||++++....+.+.+|...... ... +...+...+...+..+ .+...+.+..+...+.++||+.
T Consensus 108 ~kaviFDlDGTLid~~~~~~la~~~g~~~~~~~~~~~~~~g~~~~~~~l~~~~~~l--~~~~~~~i~~~~~~~~l~pg~~ 185 (317)
T 4eze_A 108 NGIIAFDMDSTFIAEEGVDEIARELGMSTQITAITQQAMEGKLDFNASFTRRIGML--KGTPKAVLNAVCDRMTLSPGLL 185 (317)
T ss_dssp SCEEEECTBTTTBSSCHHHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTT--TTCBHHHHHHHHHTCCBCTTHH
T ss_pred CCEEEEcCCCCccCCccHHHHHHHhCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHh--cCCCHHHHHHHHhCCEECcCHH
Confidence 68999999999999999988888888853322 222 2334455444443322 2445667777888899999999
Q ss_pred HHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHH
Q 044553 78 PAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVV 157 (275)
Q Consensus 78 e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~ 157 (275)
++|++|+++|++++|+||+....++.+++++|+..+|+.+++.+ +|.+.++...+ +..+.+|..+
T Consensus 186 e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~-----dg~~tg~i~~~----------~~~~kpkp~~ 250 (317)
T 4eze_A 186 TILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIR-----DNVLTDNITLP----------IMNAANKKQT 250 (317)
T ss_dssp HHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEE-----TTEEEEEECSS----------CCCHHHHHHH
T ss_pred HHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEee-----CCeeeeeEecc----------cCCCCCCHHH
Confidence 99999999999999999999999999999999998888776532 23333221110 0122458899
Q ss_pred HHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHHHH
Q 044553 158 IERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILL 232 (275)
Q Consensus 158 l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~l~ 232 (275)
++.++.+++.. +++|+|||||.+|+.+|+.+|. .+++ .+.+ .+... .. . .....++.+|..+|+
T Consensus 251 ~~~~~~~lgv~-~~~~i~VGDs~~Di~aa~~AG~-~va~--~~~~--~~~~~-a~---~-~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 251 LVDLAARLNIA-TENIIACGDGANDLPMLEHAGT-GIAW--KAKP--VVREK-IH---H-QINYHGFELLLFLIE 314 (317)
T ss_dssp HHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSE-EEEE--SCCH--HHHHH-CC---E-EESSSCGGGGGGGTC
T ss_pred HHHHHHHcCCC-cceEEEEeCCHHHHHHHHHCCC-eEEe--CCCH--HHHHh-cC---e-eeCCCCHHHHHHHHH
Confidence 99999988765 5899999999999999988775 3333 2221 22222 11 1 345677777766543
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.82 E-value=4.6e-20 Score=152.96 Aligned_cols=198 Identities=13% Similarity=0.069 Sum_probs=126.2
Q ss_pred ceEEEEEcCCcccCCcc-----HHHHHHHhCCChHH--HhhcCCCChHHHHHHHHHHHHhC-CCCHHHHH----------
Q 044553 3 GIVVIFDFDKTIIDCDS-----DNFVVDELGATDLF--NQLLPTMPWNSLMDRMMKELHSQ-GKTIEDIV---------- 64 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---------- 64 (275)
+++|+||+||||+++.. +..+++.+|.+... .....+.......+.++...... ..+.+.+.
T Consensus 2 ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (233)
T 3nas_A 2 LKAVIFDLDGVITDTAEYHFLAWKHIAEQIDIPFDRDMNERLKGISREESLESILIFGGAETKYTNAEKQELMHRKNRDY 81 (233)
T ss_dssp CCEEEECSBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHTTTCCHHHHHHHHHHHTTCTTTSCHHHHHHHHHHHHHHH
T ss_pred CcEEEECCCCCcCCCHHHHHHHHHHHHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence 58999999999999864 46677888876322 12222334444444444432110 22222221
Q ss_pred -HHHhc---CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCC
Q 044553 65 -EVLKR---IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTK 140 (275)
Q Consensus 65 -~~~~~---~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~ 140 (275)
..... ..++||+.++|+.|+++|++++|+||+.. ++..++++|+..+|+.+++++... ..||.|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~i~~~~~~~------~~Kp~~---- 149 (233)
T 3nas_A 82 QMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHAIVDPTTLA------KGKPDP---- 149 (233)
T ss_dssp HHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSEECCC---------------C----
T ss_pred HHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCEEeeHhhCC------CCCCCh----
Confidence 11222 23799999999999999999999999854 888999999999999998876531 456654
Q ss_pred CCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEee
Q 044553 141 CSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHE 220 (275)
Q Consensus 141 ~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 220 (275)
.+++.++..++.. +++|+||||+.+|+.+|+.+|+..+++... ..+ . .+ ...
T Consensus 150 ---------------~~~~~~~~~lgi~-~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~----~~~-~------~a-d~v 201 (233)
T 3nas_A 150 ---------------DIFLTAAAMLDVS-PADCAAIEDAEAGISAIKSAGMFAVGVGQG----QPM-L------GA-DLV 201 (233)
T ss_dssp ---------------CHHHHHHHHHTSC-GGGEEEEECSHHHHHHHHHTTCEEEECC------------------C-SEE
T ss_pred ---------------HHHHHHHHHcCCC-HHHEEEEeCCHHHHHHHHHcCCEEEEECCc----ccc-c------cC-CEE
Confidence 5677777777765 589999999999999999988754444221 111 1 12 225
Q ss_pred CCChHHHH-HHHHHHHHHhcc
Q 044553 221 WTDGEELE-QILLHLVNTIGS 240 (275)
Q Consensus 221 ~~~~~el~-~~l~~~~~~~~~ 240 (275)
.+++.|+. ..+.+.++.+..
T Consensus 202 ~~s~~el~~~~~~~~~~~~~~ 222 (233)
T 3nas_A 202 VRQTSDLTLELLHEEWEQYRI 222 (233)
T ss_dssp CSSGGGCCHHHHHHHHHHHHH
T ss_pred eCChHhCCHHHHHHHHHHHHh
Confidence 67887775 445556665544
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.9e-20 Score=153.09 Aligned_cols=168 Identities=12% Similarity=0.172 Sum_probs=118.5
Q ss_pred CCceEEEEEcCCcccCCccH--HHHHHHhCCChHHHhhc-------------CCCChHHHHHHHHHHHHhCCCCHHHHHH
Q 044553 1 MSGIVVIFDFDKTIIDCDSD--NFVVDELGATDLFNQLL-------------PTMPWNSLMDRMMKELHSQGKTIEDIVE 65 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~--~~~~~~~g~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (275)
|++++|+||+||||++++.. ...+..+|.+....... +........+.+...+ ....+.+++..
T Consensus 3 ~m~k~iiFDlDGTL~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~ 81 (211)
T 2i6x_A 3 AMIRNIVFDLGGVLIHLNREESIRRFKAIGVADIEEMLDPYLQKGLFLDLESGRKSEEEFRTELSRYI-GKELTYQQVYD 81 (211)
T ss_dssp CCCSEEEECSBTTTEEECHHHHHHHHHHTTCTTHHHHTCC---CCHHHHHHHSSSCHHHHHHHHHHHH-TSCCCHHHHHH
T ss_pred ccceEEEEeCCCeeEecchHHHHHHHHHhCCchHHHHHHHHhCchHHHHHHcCCCCHHHHHHHHHHHh-CCCCCHHHHHH
Confidence 35789999999999998764 45667777653221111 1112233333333333 22345555544
Q ss_pred HHh--cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHH------cCCcCCcceEecCCCccCCCCceeecccCC
Q 044553 66 VLK--RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEH------LGIRDCFSEINTNPGFVDEEGRLRIFPFHD 137 (275)
Q Consensus 66 ~~~--~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~------~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~ 137 (275)
.+. ...++|++.++|+.|++ |++++|+||+....++.+++. +|+..+|+.+++++... ..||.
T Consensus 82 ~~~~~~~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~------~~Kp~-- 152 (211)
T 2i6x_A 82 ALLGFLEEISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMG------KYKPN-- 152 (211)
T ss_dssp HHGGGEEEECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHT------CCTTS--
T ss_pred HHHHhhcccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeecccC------CCCCC--
Confidence 432 24789999999999999 999999999999999999998 89999999988765321 23553
Q ss_pred CCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEe
Q 044553 138 FTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVM 196 (275)
Q Consensus 138 ~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~ 196 (275)
..+++.++..++.. +++|++|||+.+|+.+|+.+|...+.+
T Consensus 153 -----------------~~~~~~~~~~~~~~-~~~~~~igD~~~Di~~a~~aG~~~~~~ 193 (211)
T 2i6x_A 153 -----------------EDIFLEMIADSGMK-PEETLFIDDGPANVATAERLGFHTYCP 193 (211)
T ss_dssp -----------------HHHHHHHHHHHCCC-GGGEEEECSCHHHHHHHHHTTCEEECC
T ss_pred -----------------HHHHHHHHHHhCCC-hHHeEEeCCCHHHHHHHHHcCCEEEEE
Confidence 47788888888765 589999999999999998888754433
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=99.82 E-value=6.1e-20 Score=154.80 Aligned_cols=105 Identities=10% Similarity=0.156 Sum_probs=87.8
Q ss_pred HHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCC
Q 044553 66 VLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGC 145 (275)
Q Consensus 66 ~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~ 145 (275)
.+....++||+.++|+.|+ |++++|+||++...++.+++++|+..+|+.+++.+... ..||
T Consensus 88 ~~~~~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~------~~Kp----------- 148 (253)
T 1qq5_A 88 AYNRLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKR------VFKP----------- 148 (253)
T ss_dssp GGGSCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGT------CCTT-----------
T ss_pred HHhcCCCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhccEEEEccccC------CCCC-----------
Confidence 3445789999999999999 99999999999999999999999999999998866431 3354
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeec
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPR 198 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~ 198 (275)
|...++.++..++.. +++|+||||+.+|+.+|+.+|...+.+.+
T Consensus 149 --------~~~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~~~~~~ 192 (253)
T 1qq5_A 149 --------HPDSYALVEEVLGVT-PAEVLFVSSNGFDVGGAKNFGFSVARVAR 192 (253)
T ss_dssp --------SHHHHHHHHHHHCCC-GGGEEEEESCHHHHHHHHHHTCEEEEECC
T ss_pred --------CHHHHHHHHHHcCCC-HHHEEEEeCChhhHHHHHHCCCEEEEECC
Confidence 457888888887765 58999999999999999998887666654
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=99.81 E-value=2.9e-20 Score=154.34 Aligned_cols=168 Identities=10% Similarity=0.082 Sum_probs=120.9
Q ss_pred ceEEEEEcCCcccCCccH--HHHHHHhCCChHHH------------hhc-CCCChHHHHHHHHHHHHhCCCCHHHHHHHH
Q 044553 3 GIVVIFDFDKTIIDCDSD--NFVVDELGATDLFN------------QLL-PTMPWNSLMDRMMKELHSQGKTIEDIVEVL 67 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~--~~~~~~~g~~~~~~------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (275)
+++|+||+||||++++.. ...+..+|.+.... ... +........+.+.... ....+.+++.+.+
T Consensus 28 ik~viFD~DGTL~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 106 (229)
T 4dcc_A 28 IKNLLIDLGGVLINLDRERCIENFKKIGFQNIEEKFCTHQLDGIFLQQEKGLITPAEFRDGIREMM-GKMVSDKQIDAAW 106 (229)
T ss_dssp CCEEEECSBTTTBCBCHHHHHHHHHHHTCTTHHHHHHHTHHHHHHHHHHTTCSCHHHHHHHHHHHH-TSCCCHHHHHHHH
T ss_pred CCEEEEeCCCeEEeCChHHHHHHHHHhCCCcHHHHHHHhcCcHHHHHHHCCCCCHHHHHHHHHHHh-CCCCCHHHHHHHH
Confidence 589999999999998653 45666777752211 111 1233444444443333 3445566666655
Q ss_pred hcC--CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHH------HHcCCcCCcceEecCCCccCCCCceeecccCCCC
Q 044553 68 KRI--PIHPRVVPAIKSAHALGCELRIVSDANLFFIETIL------EHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFT 139 (275)
Q Consensus 68 ~~~--~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l------~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~ 139 (275)
... .++||+.++|+.|+++ ++++|+||+....++.++ +.+|+..+|+.+++++... ..||.|
T Consensus 107 ~~~~~~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~------~~KP~~--- 176 (229)
T 4dcc_A 107 NSFLVDIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMK------MAKPEP--- 176 (229)
T ss_dssp HTTBCCCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHT------CCTTCH---
T ss_pred HHHHHhccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccC------CCCCCH---
Confidence 543 5789999999999998 999999999999888665 7778889999988765431 345544
Q ss_pred CCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeec
Q 044553 140 KCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPR 198 (275)
Q Consensus 140 ~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~ 198 (275)
.+++.++..++.. +++|++|||+.+|+.+|+.+|+..+++..
T Consensus 177 ----------------~~~~~~~~~~g~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~~ 218 (229)
T 4dcc_A 177 ----------------EIFKAVTEDAGID-PKETFFIDDSEINCKVAQELGISTYTPKA 218 (229)
T ss_dssp ----------------HHHHHHHHHHTCC-GGGEEEECSCHHHHHHHHHTTCEEECCCT
T ss_pred ----------------HHHHHHHHHcCCC-HHHeEEECCCHHHHHHHHHcCCEEEEECC
Confidence 7888888888765 58999999999999999998876555443
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.5e-19 Score=150.63 Aligned_cols=197 Identities=15% Similarity=0.150 Sum_probs=126.9
Q ss_pred CCceEEEEEcCCcccCCccH-----HHHH---HHhCCCh---HH----H-h----hcCCCChHHHHHHHHHH---HHhCC
Q 044553 1 MSGIVVIFDFDKTIIDCDSD-----NFVV---DELGATD---LF----N-Q----LLPTMPWNSLMDRMMKE---LHSQG 57 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~-----~~~~---~~~g~~~---~~----~-~----~~~~~~~~~~~~~~~~~---~~~~~ 57 (275)
|++|+|+||+||||+|++.. ..++ ..+|.+. .. . . ...+.........+... .....
T Consensus 11 M~~k~iifDlDGTL~d~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 90 (251)
T 2pke_A 11 QAIQLVGFDGDDTLWKSEDYYRTAEADFEAILSGYLDLGDSRMQQHLLAVERRNLKIFGYGAKGMTLSMIETAIELTEAR 90 (251)
T ss_dssp CSCCEEEECCBTTTBCCHHHHHHHHHHHHHHHTTTCCC-----CTTHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHTTTC
T ss_pred CceeEEEEeCCCCCccCcHhHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhhhhccCcchHHHHHHHHHHHHhcCCC
Confidence 34689999999999998653 2233 3455543 11 0 0 01122333333333221 11112
Q ss_pred CCHH---HHHH-----HHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCc
Q 044553 58 KTIE---DIVE-----VLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGR 129 (275)
Q Consensus 58 ~~~~---~~~~-----~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~ 129 (275)
...+ .+.+ ......++||+.++|+.|+ +|++++|+||+....++..++.+|+..+|+.+++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~i~~~--------- 160 (251)
T 2pke_A 91 IEARDIQRIVEIGRATLQHPVEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFPRIEVV--------- 160 (251)
T ss_dssp CCHHHHHHHHHHHHHHHTCCCCBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCCCEEEE---------
T ss_pred CChHHHHHHHHHHHHHHhccCCcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCceeeee---------
Confidence 2222 1111 1234788999999999999 99999999999999999999999999999988752
Q ss_pred eeecccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCC-CCcccccccCCCCeEeecCCchhh----
Q 044553 130 LRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRKNFPLW---- 204 (275)
Q Consensus 130 ~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~~~~~~---- 204 (275)
.||. ...++.++..++.. +++|++|||+. +|+.+|+.+|...+++. .++...
T Consensus 161 --~kp~-------------------~~~~~~~~~~l~~~-~~~~i~iGD~~~~Di~~a~~aG~~~~~v~-~~~~~~~~~~ 217 (251)
T 2pke_A 161 --SEKD-------------------PQTYARVLSEFDLP-AERFVMIGNSLRSDVEPVLAIGGWGIYTP-YAVTWAHEQD 217 (251)
T ss_dssp --SCCS-------------------HHHHHHHHHHHTCC-GGGEEEEESCCCCCCHHHHHTTCEEEECC-CC--------
T ss_pred --CCCC-------------------HHHHHHHHHHhCcC-chhEEEECCCchhhHHHHHHCCCEEEEEC-CCCccccccc
Confidence 2443 47778888888765 58999999998 99999999888666553 333110
Q ss_pred H-HHhhCCCceeEEEeeCCChHHHHHHHHHHH
Q 044553 205 D-LIIRNPMLIKAEIHEWTDGEELEQILLHLV 235 (275)
Q Consensus 205 ~-l~~~~~~~~~~~~~~~~~~~el~~~l~~~~ 235 (275)
+ +... .+++..++++.||.++|+++.
T Consensus 218 ~~~~~~-----~~~~~~i~~~~el~~~l~~~~ 244 (251)
T 2pke_A 218 HGVAAD-----EPRLREVPDPSGWPAAVRALD 244 (251)
T ss_dssp -----C-----CTTEEECSSGGGHHHHHHHHH
T ss_pred cccccC-----CCCeeeeCCHHHHHHHHHHhC
Confidence 1 1111 111225799999998887665
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=99.81 E-value=3.5e-20 Score=157.73 Aligned_cols=105 Identities=15% Similarity=0.130 Sum_probs=88.2
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHc---CCcCCcceEecCCCccCCCCceeecccCCCCCCCCCC
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHL---GIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGC 145 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~---gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~ 145 (275)
...++||+.++|+.|+++|++++|+||++...++.+++++ |+.++|+.+++. .. . .||+|
T Consensus 128 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~-~~------~-~KP~p--------- 190 (261)
T 1yns_A 128 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDT-KI------G-HKVES--------- 190 (261)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECG-GG------C-CTTCH---------
T ss_pred ccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEec-CC------C-CCCCH---------
Confidence 4789999999999999999999999999999999999854 599999999876 31 1 57766
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCc
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNF 201 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~ 201 (275)
.+++.++.+++.. |++|+||||+.+|+.+|+++|+..+++.+.+.
T Consensus 191 ----------~~~~~~~~~lg~~-p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~ 235 (261)
T 1yns_A 191 ----------ESYRKIADSIGCS-TNNILFLTDVTREASAAEEADVHVAVVVRPGN 235 (261)
T ss_dssp ----------HHHHHHHHHHTSC-GGGEEEEESCHHHHHHHHHTTCEEEEECCTTC
T ss_pred ----------HHHHHHHHHhCcC-cccEEEEcCCHHHHHHHHHCCCEEEEEeCCCC
Confidence 6777777777765 58999999999999999999998777766543
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.3e-19 Score=147.00 Aligned_cols=126 Identities=18% Similarity=0.243 Sum_probs=97.9
Q ss_pred cCCCCCCHHHHHHHHHHcC-CcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCc
Q 044553 69 RIPIHPRVVPAIKSAHALG-CELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNL 147 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g-~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~ 147 (275)
...++||+.++|+.|+++| ++++++||+....+...++.+|+..+|+.+++. .||
T Consensus 103 ~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~-----------~kp------------- 158 (234)
T 3ddh_A 103 PIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDHIEVM-----------SDK------------- 158 (234)
T ss_dssp CCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSEEEEE-----------SCC-------------
T ss_pred cCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhheeeec-----------CCC-------------
Confidence 4688999999999999999 999999999999999999999999999988752 233
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCC-CCcccccccCCCCeEeecC---CchhhHHHhhCCCceeEEEeeCCC
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRK---NFPLWDLIIRNPMLIKAEIHEWTD 223 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~ 223 (275)
|+.+++.++..++.. +++|++|||+. +|+.+|+.+|...+++..+ ++...+. .. ..+ ....++
T Consensus 159 ------k~~~~~~~~~~lgi~-~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~---~~--~~~-d~v~~~ 225 (234)
T 3ddh_A 159 ------TEKEYLRLLSILQIA-PSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTET---FA--HER-LKQVKR 225 (234)
T ss_dssp ------SHHHHHHHHHHHTCC-GGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---C---CC--CTT-EEECSS
T ss_pred ------CHHHHHHHHHHhCCC-cceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCccc---cc--CCC-ceeccc
Confidence 568899999988876 58999999996 9999999988876665332 2211111 11 111 346899
Q ss_pred hHHHHHHH
Q 044553 224 GEELEQIL 231 (275)
Q Consensus 224 ~~el~~~l 231 (275)
+.||.++|
T Consensus 226 l~el~~~l 233 (234)
T 3ddh_A 226 LDDLLSLL 233 (234)
T ss_dssp GGGHHHHC
T ss_pred HHHHHHhc
Confidence 99998764
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.7e-20 Score=154.93 Aligned_cols=199 Identities=14% Similarity=0.062 Sum_probs=131.3
Q ss_pred CceEEEEEcCCcccCCcc-----HHHHHHHhCCChHH----HhhcC---------------CCChHHHHHHHHHHH-HhC
Q 044553 2 SGIVVIFDFDKTIIDCDS-----DNFVVDELGATDLF----NQLLP---------------TMPWNSLMDRMMKEL-HSQ 56 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~----~~~~~---------------~~~~~~~~~~~~~~~-~~~ 56 (275)
++|+|+||+||||+++.. +..+++++|.+... ..+.. ...........+..+ ...
T Consensus 14 ~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (254)
T 3umg_A 14 NVRAVLFDTFGTVVDWRTGIATAVADYAARHQLEVDAVAFADRWRARYQPSMDAILSGAREFVTLDILHRENLDFVLRES 93 (254)
T ss_dssp BCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTHHHHHHHHHTTSSCCCCHHHHHHHHHHHHHHHT
T ss_pred CceEEEEeCCCceecCchHHHHHHHHHHHHhcCCCCHHHHHHHHHHhHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHh
Confidence 478999999999999854 45677777765211 11111 111122222222211 111
Q ss_pred C-----CCHHHH---HHHHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCC
Q 044553 57 G-----KTIEDI---VEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEG 128 (275)
Q Consensus 57 ~-----~~~~~~---~~~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g 128 (275)
+ ...+.. ...+....++|++.++|+.|++. ++++++||+....++.+++.+|+. |+.+++++...
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~--f~~~~~~~~~~---- 166 (254)
T 3umg_A 94 GIDPTNHDSGELDELARAWHVLTPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP--WDVIIGSDINR---- 166 (254)
T ss_dssp TCCGGGSCHHHHHHHHGGGGSCCBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC--CSCCCCHHHHT----
T ss_pred CCCcCcCCHHHHHHHHHHHhhCcCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC--eeEEEEcCcCC----
Confidence 2 233332 23345678999999999999997 999999999999999999999986 78777654321
Q ss_pred ceeecccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC---CchhhH
Q 044553 129 RLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK---NFPLWD 205 (275)
Q Consensus 129 ~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~---~~~~~~ 205 (275)
..|| |..+++.++..++.. +++|++|||+.+|+.+|+.+|...+.+.+. |+....
T Consensus 167 --~~kp-------------------~~~~~~~~~~~lgi~-~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~ 224 (254)
T 3umg_A 167 --KYKP-------------------DPQAYLRTAQVLGLH-PGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTD 224 (254)
T ss_dssp --CCTT-------------------SHHHHHHHHHHTTCC-GGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCS
T ss_pred --CCCC-------------------CHHHHHHHHHHcCCC-hHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccc
Confidence 2344 568899999988876 589999999999999999999876666542 221101
Q ss_pred HHhhCCCceeEEEeeCCChHHHHHHHHH
Q 044553 206 LIIRNPMLIKAEIHEWTDGEELEQILLH 233 (275)
Q Consensus 206 l~~~~~~~~~~~~~~~~~~~el~~~l~~ 233 (275)
-+. ....+ ...++++.||..+|..
T Consensus 225 ~~~---~~~~~-d~~~~~~~el~~~l~~ 248 (254)
T 3umg_A 225 DLA---PTGSW-DISATDITDLAAQLRA 248 (254)
T ss_dssp CSS---CSSCC-SEEESSHHHHHHHHHH
T ss_pred ccc---ccCCC-ceEECCHHHHHHHhcC
Confidence 000 01122 2367999999988764
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.6e-19 Score=147.51 Aligned_cols=201 Identities=14% Similarity=0.170 Sum_probs=117.5
Q ss_pred CceEEEEEcCCcccCCccHHHHHHHhCCC--hH---H-----HhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHH---h
Q 044553 2 SGIVVIFDFDKTIIDCDSDNFVVDELGAT--DL---F-----NQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVL---K 68 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~~~~~~~~~g~~--~~---~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 68 (275)
++|+|+||+||||++++........+-.. .. . ........+...+...+. ......+.+.++. .
T Consensus 3 mik~i~fDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 79 (219)
T 3kd3_A 3 AMKNIIFDFDSTLIKKESLELILEPILQKSPAKLKEIEYITNLGMQGDISFRDSLQKRLA---IASPTKQSIKEFSNKYC 79 (219)
T ss_dssp -CEEEEECCCCCCBSSCHHHHHHTTTTTTCHHHHHHHHHHHHHHHTTSSCHHHHHHHHHH---HCCCBHHHHHHHHHHHT
T ss_pred cceEEEEeCCCCCcCcccHHHHHHHHHhcccchHHHHHHHHHHHhcCcccHHHHHHHHHh---hccCCHHHHHHHHHhhc
Confidence 46899999999999988654433222110 00 0 011112233333322222 1122333333333 3
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc--CCcceEecCCCccCCCCceeecccCCCCCCCCCCC
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR--DCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCN 146 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~--~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~ 146 (275)
...++||+.++|+.|+++|++++|+||+....++..++++|+. .+|...+ .+..+|.+...+.+.
T Consensus 80 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~--------- 146 (219)
T 3kd3_A 80 PNLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVET----IWNSDGSFKELDNSN--------- 146 (219)
T ss_dssp TTTBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEE----EECTTSBEEEEECTT---------
T ss_pred cccCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeee----eecCCCceeccCCCC---------
Confidence 3668999999999999999999999999999999999999994 3443211 111223222211110
Q ss_pred cCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHH
Q 044553 147 LCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEE 226 (275)
Q Consensus 147 ~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e 226 (275)
..|...++.+...++.. ++++++||||.+|+.++ ++|...+.+........+.....+ ....+++.|
T Consensus 147 -----~~~~~~~~~l~~~~~~~-~~~~~~vGD~~~Di~~~-~~G~~~~~v~~~~~~~~~~~~~~a------d~v~~~~~e 213 (219)
T 3kd3_A 147 -----GACDSKLSAFDKAKGLI-DGEVIAIGDGYTDYQLY-EKGYATKFIAYMEHIEREKVINLS------KYVARNVAE 213 (219)
T ss_dssp -----STTTCHHHHHHHHGGGC-CSEEEEEESSHHHHHHH-HHTSCSEEEEECSSCCCHHHHHHC------SEEESSHHH
T ss_pred -----CCcccHHHHHHHHhCCC-CCCEEEEECCHhHHHHH-hCCCCcEEEeccCccccHHHHhhc------ceeeCCHHH
Confidence 01223344444444544 58999999999999998 568776666544333333333322 225789999
Q ss_pred HHHHH
Q 044553 227 LEQIL 231 (275)
Q Consensus 227 l~~~l 231 (275)
|.++|
T Consensus 214 l~~~l 218 (219)
T 3kd3_A 214 LASLI 218 (219)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 88765
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.80 E-value=3.6e-20 Score=149.76 Aligned_cols=185 Identities=16% Similarity=0.148 Sum_probs=128.4
Q ss_pred eEEEEEcCCcccCCccHHHHHHHhCCChHH---Hhh-cCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHH
Q 044553 4 IVVIFDFDKTIIDCDSDNFVVDELGATDLF---NQL-LPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPA 79 (275)
Q Consensus 4 ~~viFD~DGTL~d~~~~~~~~~~~g~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~ 79 (275)
.+++||+||||++++.+..+.+.+|..... ... .....+..........+ .+...+.+........++||+.++
T Consensus 10 ~ivifDlDGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 87 (201)
T 4ap9_A 10 KVAVIDIEGTLTDFEFWREMARITGKREIEELLEKGLSGEVEWLDSLLKRVGLI--RGIDEGTFLRTREKVNVSPEAREL 87 (201)
T ss_dssp CEEEEECBTTTBCCCHHHHHHHHHCCHHHHHHHHHHHHTSSCHHHHHHHHHHHT--TTCBHHHHHHGGGGCCCCHHHHHH
T ss_pred eeEEecccCCCcchHHHHHHHHHhChHHHHHHHHHHhcCCCCHHHHHHHHHHHh--cCCCHHHHHHHHHhCCCChhHHHH
Confidence 345599999999999888888888873211 111 12223444443333222 244566777778889999999999
Q ss_pred HHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceee-cccCCCCCCCCCCCcCCCCCchHHHH
Q 044553 80 IKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRI-FPFHDFTKCSHGCNLCPPNMCKGVVI 158 (275)
Q Consensus 80 L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~-kp~~~~~~~~~~~~~~~~~~~K~~~l 158 (275)
|+.|+++|++++|+||+....++.+ +.+|+..+++.+.+.+.. ..+ +|.+ ..|..++
T Consensus 88 l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~---------------~~k~~~l 145 (201)
T 4ap9_A 88 VETLREKGFKVVLISGSFEEVLEPF-KELGDEFMANRAIFEDGK------FQGIRLRF---------------RDKGEFL 145 (201)
T ss_dssp HHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEEEEEEEEETTE------EEEEECCS---------------SCHHHHH
T ss_pred HHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhheeeEEeeCCc------eECCcCCc---------------cCHHHHH
Confidence 9999999999999999988888888 889998776666544432 222 3322 2277777
Q ss_pred HHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHHHHHH
Q 044553 159 ERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHL 234 (275)
Q Consensus 159 ~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~l~~~ 234 (275)
+.+ .+++|++|||+.+|+.+++.+|.. +++..... .+ .....++.||.++|+++
T Consensus 146 ~~l-------~~~~~i~iGD~~~Di~~~~~ag~~-v~~~~~~~-------------~a-d~v~~~~~el~~~l~~l 199 (201)
T 4ap9_A 146 KRF-------RDGFILAMGDGYADAKMFERADMG-IAVGREIP-------------GA-DLLVKDLKELVDFIKNL 199 (201)
T ss_dssp GGG-------TTSCEEEEECTTCCHHHHHHCSEE-EEESSCCT-------------TC-SEEESSHHHHHHHHHTC
T ss_pred Hhc-------CcCcEEEEeCCHHHHHHHHhCCce-EEECCCCc-------------cc-cEEEccHHHHHHHHHHh
Confidence 766 258999999999999999887773 54433211 11 22568999998888754
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.80 E-value=3.1e-19 Score=147.31 Aligned_cols=197 Identities=13% Similarity=0.141 Sum_probs=133.6
Q ss_pred CceEEEEEcCCcccCCccH-----HHHHHHhCCChH---HHhhcCCCChHHHHHHHHHHHHhCCCCH---HHHHH-----
Q 044553 2 SGIVVIFDFDKTIIDCDSD-----NFVVDELGATDL---FNQLLPTMPWNSLMDRMMKELHSQGKTI---EDIVE----- 65 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~~-----~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----- 65 (275)
++++|+||+||||++++.. ..+++.+|.+.. ......+......+..+...... .... +.+.+
T Consensus 3 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 81 (229)
T 2fdr_A 3 GFDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEASI-PLSASLLDKSEKLLDMR 81 (229)
T ss_dssp CCSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCCHHHHHHHHHHHHCC-CCCTHHHHHHHHHHHHH
T ss_pred CccEEEEcCCCCcCccHHHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHHH
Confidence 3689999999999999753 456777787522 12222234445555555444321 1111 11211
Q ss_pred HHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCc-ceEecCCCccCCCCceee--cccCCCCCCC
Q 044553 66 VLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCF-SEINTNPGFVDEEGRLRI--FPFHDFTKCS 142 (275)
Q Consensus 66 ~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~f-d~i~~~~~~~~~~g~~~~--kp~~~~~~~~ 142 (275)
......++|++.++|+.|+. +++++||+....++..++++|+..+| +.+++.+... .+ ||
T Consensus 82 ~~~~~~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~------~~~~kp-------- 144 (229)
T 2fdr_A 82 LERDVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLG------ADRVKP-------- 144 (229)
T ss_dssp HHHHCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHC------TTCCTT--------
T ss_pred hhcCCccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhccceEEeccccc------cCCCCc--------
Confidence 12457889999999998874 99999999999999999999999999 8887755321 22 33
Q ss_pred CCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCch----hhHHHhhCCCceeEEE
Q 044553 143 HGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFP----LWDLIIRNPMLIKAEI 218 (275)
Q Consensus 143 ~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~ 218 (275)
|+..++.++..++.. ++++++|||+.+|+.+++.+|...+++.+.... ...+....+ .
T Consensus 145 -----------k~~~~~~~~~~l~~~-~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~a------d 206 (229)
T 2fdr_A 145 -----------KPDIFLHGAAQFGVS-PDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGA------E 206 (229)
T ss_dssp -----------SSHHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTC------S
T ss_pred -----------CHHHHHHHHHHcCCC-hhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCC------c
Confidence 558888888888765 589999999999999999888865666544321 112222212 1
Q ss_pred eeCCChHHHHHHHHHH
Q 044553 219 HEWTDGEELEQILLHL 234 (275)
Q Consensus 219 ~~~~~~~el~~~l~~~ 234 (275)
...+++.||.++|+++
T Consensus 207 ~v~~~~~el~~~l~~~ 222 (229)
T 2fdr_A 207 TVISRMQDLPAVIAAM 222 (229)
T ss_dssp EEESCGGGHHHHHHHH
T ss_pred eeecCHHHHHHHHHHh
Confidence 2568999998877654
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.80 E-value=5e-20 Score=154.57 Aligned_cols=198 Identities=17% Similarity=0.092 Sum_probs=131.7
Q ss_pred CCceEEEEEcCCcccCCcc-----HHHHHHHhCCChHHH----h-----------hcC----CCChHHHHHHHHHHH-Hh
Q 044553 1 MSGIVVIFDFDKTIIDCDS-----DNFVVDELGATDLFN----Q-----------LLP----TMPWNSLMDRMMKEL-HS 55 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~~----~-----------~~~----~~~~~~~~~~~~~~~-~~ 55 (275)
|++|+|+||+||||+++.. +..+++.+|.+.... . ... ...+.......+..+ ..
T Consensus 20 m~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (254)
T 3umc_A 20 QGMRAILFDVFGTLVDWRSSLIEQFQALERELGGTLPCVELTDRWRQQYKPAMDRVRNGQAPWQHLDQLHRQSLEALAGE 99 (254)
T ss_dssp SSCCEEEECCBTTTEEHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHTHHHHHHHHTTSSCCCCHHHHHHHHHHHHHHH
T ss_pred cCCcEEEEeCCCccEecCccHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHHHHH
Confidence 5689999999999999854 456777777752111 0 000 111222222222221 11
Q ss_pred CC--CCHHH---HHHHHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCce
Q 044553 56 QG--KTIED---IVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRL 130 (275)
Q Consensus 56 ~~--~~~~~---~~~~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~ 130 (275)
.+ ...+. +........++|++.++|+.|++. ++++++||+....+..+++.+|+. |+.+++.+...
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~--f~~~~~~~~~~------ 170 (254)
T 3umc_A 100 FGLALDEALLQRITGFWHRLRPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP--WDMLLCADLFG------ 170 (254)
T ss_dssp TTCCCCHHHHHHHHGGGGSCEECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC--CSEECCHHHHT------
T ss_pred hCCCCCHHHHHHHHHHHhcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC--cceEEeecccc------
Confidence 12 23322 223345678899999999999986 999999999999999999999986 88887764321
Q ss_pred eecccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC---Cch-hhHH
Q 044553 131 RIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK---NFP-LWDL 206 (275)
Q Consensus 131 ~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~---~~~-~~~l 206 (275)
..|| |..+++.++..++.. +++|++|||+.+|+.+|+.+|+..+.+.+. +.. ..++
T Consensus 171 ~~kp-------------------~~~~~~~~~~~lgi~-~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l 230 (254)
T 3umc_A 171 HYKP-------------------DPQVYLGACRLLDLP-PQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDL 230 (254)
T ss_dssp CCTT-------------------SHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSS
T ss_pred cCCC-------------------CHHHHHHHHHHcCCC-hHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCccc
Confidence 2343 568999999988876 589999999999999999999876666542 221 1111
Q ss_pred HhhCCCceeEEEeeCCChHHHHHHHH
Q 044553 207 IIRNPMLIKAEIHEWTDGEELEQILL 232 (275)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~el~~~l~ 232 (275)
.. ...+ ...++++.||..+|.
T Consensus 231 ~~----~~~a-d~v~~~l~el~~~l~ 251 (254)
T 3umc_A 231 AA----EQDW-DLIASDLLDLHRQLA 251 (254)
T ss_dssp SC----SSCC-SEEESSHHHHHHHHH
T ss_pred cc----CCCC-cEEECCHHHHHHHhc
Confidence 00 1122 236799999998775
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.80 E-value=3.6e-20 Score=148.25 Aligned_cols=139 Identities=12% Similarity=0.062 Sum_probs=97.4
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCH---------------HHHHHHHHHcCCcCCcceEecCCCccCCCCceee
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANL---------------FFIETILEHLGIRDCFSEINTNPGFVDEEGRLRI 132 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~---------------~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~ 132 (275)
...+++||+.++|+.|+++|++++|+||++. ..++..++++| .+|+.++.+.... .+.....
T Consensus 24 ~~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~~~~~~~~~~~~~-~~~~~~~ 100 (179)
T 3l8h_A 24 DEWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMG--GVVDAIFMCPHGP-DDGCACR 100 (179)
T ss_dssp GGCCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT--CCCCEEEEECCCT-TSCCSSS
T ss_pred HHceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCC--CceeEEEEcCCCC-CCCCCCC
Confidence 4578899999999999999999999999986 67788888888 3445444211100 0111134
Q ss_pred cccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCC
Q 044553 133 FPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPM 212 (275)
Q Consensus 133 kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~ 212 (275)
||.| .+++.++..++.. +++|+||||+.+|+.+|+++|+..+++..+ +...........
T Consensus 101 KP~~-------------------~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~ 159 (179)
T 3l8h_A 101 KPLP-------------------GMYRDIARRYDVD-LAGVPAVGDSLRDLQAAAQAGCAPWLVQTG-NGRKTLAQGGLP 159 (179)
T ss_dssp TTSS-------------------HHHHHHHHHHTCC-CTTCEEEESSHHHHHHHHHHTCEEEEESTT-THHHHHHHCCCC
T ss_pred CCCH-------------------HHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHCCCcEEEECCC-CcchhhhhcccC
Confidence 6644 7788888888765 589999999999999999999876666544 433222221111
Q ss_pred ceeEEEeeCCChHHHHHHHHH
Q 044553 213 LIKAEIHEWTDGEELEQILLH 233 (275)
Q Consensus 213 ~~~~~~~~~~~~~el~~~l~~ 233 (275)
.+ ...++++.||.+++.+
T Consensus 160 --~~-d~v~~~l~el~~~l~~ 177 (179)
T 3l8h_A 160 --EG-TRVCEDLAAVAEQLLQ 177 (179)
T ss_dssp --TT-EEEESSHHHHHHHHHH
T ss_pred --CC-cEEecCHHHHHHHHHh
Confidence 12 3478999999988753
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=99.80 E-value=2.5e-19 Score=146.88 Aligned_cols=165 Identities=14% Similarity=0.175 Sum_probs=114.7
Q ss_pred ceEEEEEcCCcccCCcc-----HHHHHHHhCCC---hHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHH----------
Q 044553 3 GIVVIFDFDKTIIDCDS-----DNFVVDELGAT---DLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIV---------- 64 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~-----~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 64 (275)
+|+|+||+||||++++. +..+++++|.+ ........+......+..++... ....+.+.+.
T Consensus 2 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 80 (221)
T 2wf7_A 2 FKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLA-DKKVSAEEFKELAKRKNDNY 80 (221)
T ss_dssp CCEEEECCBTTTBTHHHHHHHHHHHHHHHTTCCCCSHHHHTTTTTCCHHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHH
T ss_pred CcEEEECCCCcccCChHHHHHHHHHHHHHcCCCCCCHHHHHHhCCCCHHHHHHHHHHHh-CCCCChHHHHHHHHHHHHHH
Confidence 68999999999999865 25567777776 22222222333444444443322 1122322211
Q ss_pred -HHHh---cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCC
Q 044553 65 -EVLK---RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTK 140 (275)
Q Consensus 65 -~~~~---~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~ 140 (275)
.... ...++|++.++|+.|++.|++++++||+ ..++..++++|+..+|+.+++.+... ..||.|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~~~~~~~~~------~~Kp~~---- 148 (221)
T 2wf7_A 81 VKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPAEVA------ASKPAP---- 148 (221)
T ss_dssp HHHGGGCCGGGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSEECCTTTSS------SCTTSS----
T ss_pred HHHHhhccCCCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcceEeccccCC------CCCCCh----
Confidence 1111 3568899999999999999999999998 56788899999999999988765421 345543
Q ss_pred CCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEe
Q 044553 141 CSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVM 196 (275)
Q Consensus 141 ~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~ 196 (275)
..++.++..++.. +++|++|||+.+|+.+|+.+|...+.+
T Consensus 149 ---------------~~~~~~~~~lgi~-~~~~i~iGD~~nDi~~a~~aG~~~~~~ 188 (221)
T 2wf7_A 149 ---------------DIFIAAAHAVGVA-PSESIGLEDSQAGIQAIKDSGALPIGV 188 (221)
T ss_dssp ---------------HHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEE
T ss_pred ---------------HHHHHHHHHcCCC-hhHeEEEeCCHHHHHHHHHCCCEEEEE
Confidence 6788888888766 589999999999999998888754443
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=8.4e-21 Score=154.51 Aligned_cols=169 Identities=14% Similarity=0.186 Sum_probs=115.3
Q ss_pred CceEEEEEcCCcccCCcc--HHHHHHHhCCChHH---Hhh----------cCCCChHHHHHHHHHHHHhCCCCHHHHHHH
Q 044553 2 SGIVVIFDFDKTIIDCDS--DNFVVDELGATDLF---NQL----------LPTMPWNSLMDRMMKELHSQGKTIEDIVEV 66 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~--~~~~~~~~g~~~~~---~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 (275)
++++|+||+||||++++. ....+..+|..... ... .+........+.+.... ....+.+++.+.
T Consensus 6 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 84 (206)
T 2b0c_A 6 AKMLYIFDLGNVIVDIDFNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEALCHEM-ALPLSYEQFSHG 84 (206)
T ss_dssp CCCEEEECCBTTTEEEETHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHTTCSCHHHHHHHHHHHH-TCCCCHHHHHHH
T ss_pred cccEEEEcCCCeeecCcHHHHHHHHHHhcCCCHHHHHHHHhcccHHHHHhcCCCCHHHHHHHHHHHh-CCCCCHHHHHHH
Confidence 468999999999999872 34455555543211 111 11122233333333333 223445555544
Q ss_pred Hhc--CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHH-cCCcCCcceEecCCCccCCCCceeecccCCCCCCCC
Q 044553 67 LKR--IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEH-LGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSH 143 (275)
Q Consensus 67 ~~~--~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~-~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~ 143 (275)
+.. ..++||+.++|+.|+++|++++|+||++...++.++++ +|+..+|+.+++++... ..||.|
T Consensus 85 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~------~~Kp~~------- 151 (206)
T 2b0c_A 85 WQAVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLG------MRKPEA------- 151 (206)
T ss_dssp HHTCEEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHT------CCTTCH-------
T ss_pred HHHHhcccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEecccC------CCCCCH-------
Confidence 433 67899999999999999999999999988777776766 78888899888765421 235543
Q ss_pred CCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEee
Q 044553 144 GCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMP 197 (275)
Q Consensus 144 ~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~ 197 (275)
.+++.++..++.. +++|+||||+.+|+.+|+.+|...+.+.
T Consensus 152 ------------~~~~~~~~~~~~~-~~~~~~vgD~~~Di~~a~~aG~~~~~~~ 192 (206)
T 2b0c_A 152 ------------RIYQHVLQAEGFS-PSDTVFFDDNADNIEGANQLGITSILVK 192 (206)
T ss_dssp ------------HHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEECC
T ss_pred ------------HHHHHHHHHcCCC-HHHeEEeCCCHHHHHHHHHcCCeEEEec
Confidence 6777777777765 5899999999999999988887655543
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.80 E-value=3e-19 Score=161.77 Aligned_cols=203 Identities=14% Similarity=0.118 Sum_probs=141.4
Q ss_pred CceEEEEEcCCcccCCccHHHHHHHhCCChHHH----hh-cCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCH
Q 044553 2 SGIVVIFDFDKTIIDCDSDNFVVDELGATDLFN----QL-LPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRV 76 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~ 76 (275)
++++|+||+||||++++.+..+.+.+|...... .. .+...+...+...+..+. +...+.+......+.++||+
T Consensus 184 ~~k~viFD~DgTLi~~~~~~~la~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~pg~ 261 (415)
T 3p96_A 184 AKRLIVFDVDSTLVQGEVIEMLAAKAGAEGQVAAITDAAMRGELDFAQSLQQRVATLA--GLPATVIDEVAGQLELMPGA 261 (415)
T ss_dssp CCCEEEECTBTTTBSSCHHHHHHHHTTCHHHHHHHHHHHHTTCSCHHHHHHHHHHTTT--TCBTHHHHHHHHHCCBCTTH
T ss_pred CCcEEEEcCcccCcCCchHHHHHHHcCCcHHHHHHHHHHhcCCcCHHHHHHHHHHHhc--CCCHHHHHHHHHhCccCccH
Confidence 368999999999999999988888888864332 22 223445555555444332 45556677777889999999
Q ss_pred HHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHH
Q 044553 77 VPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGV 156 (275)
Q Consensus 77 ~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~ 156 (275)
.++|++|+++|++++|+||+....++.+++++|++.+|+..+.. .+|.+.++...+ ...+++|..
T Consensus 262 ~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~-----~dg~~tg~~~~~----------v~~~kpk~~ 326 (415)
T 3p96_A 262 RTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEI-----VDGTLTGRVVGP----------IIDRAGKAT 326 (415)
T ss_dssp HHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEE-----ETTEEEEEECSS----------CCCHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEE-----eCCEEEeeEccC----------CCCCcchHH
Confidence 99999999999999999999999999999999998777654321 123333321110 011244889
Q ss_pred HHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHHHH
Q 044553 157 VIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILL 232 (275)
Q Consensus 157 ~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~l~ 232 (275)
+++.++.+++.. +++++||||+.+|+.+++.+|. .+++ ... ..+.+.... .....++.++..++.
T Consensus 327 ~~~~~~~~~gi~-~~~~i~vGD~~~Di~~a~~aG~-~va~--~~~---~~~~~~ad~----~i~~~~l~~ll~~l~ 391 (415)
T 3p96_A 327 ALREFAQRAGVP-MAQTVAVGDGANDIDMLAAAGL-GIAF--NAK---PALREVADA----SLSHPYLDTVLFLLG 391 (415)
T ss_dssp HHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSE-EEEE--SCC---HHHHHHCSE----EECSSCTTHHHHHTT
T ss_pred HHHHHHHHcCcC-hhhEEEEECCHHHHHHHHHCCC-eEEE--CCC---HHHHHhCCE----EEccCCHHHHHHHhC
Confidence 999999998875 5899999999999999988765 3333 222 222222211 334567777776654
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=99.79 E-value=2.8e-20 Score=149.52 Aligned_cols=163 Identities=17% Similarity=0.099 Sum_probs=108.6
Q ss_pred CCceEEEEEcCCcccCCcc-----HHHHHHHhCCChHHHh---hcCCCChHHHHHHHHHHHHhCCCCHHHH----HHHHh
Q 044553 1 MSGIVVIFDFDKTIIDCDS-----DNFVVDELGATDLFNQ---LLPTMPWNSLMDRMMKELHSQGKTIEDI----VEVLK 68 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 68 (275)
|++++|+||+||||+++.. +..+++++|.+..... ......+ ................+ .....
T Consensus 4 M~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (190)
T 2fi1_A 4 MKYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVSTP----FAIETFAPNLENFLEKYKENEARELE 79 (190)
T ss_dssp CCCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHCHH----HHHHHHCTTCTTHHHHHHHHHHHHTT
T ss_pred CcccEEEEeCCCCcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHHccccH----HHHHHHhhhHHHHHHHHHHHHHHhcC
Confidence 3468999999999999864 2456667776422111 1111111 11111111100001122 22233
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcC
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLC 148 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~ 148 (275)
...++|++.++|+.|+++|++++++||+.. .++..++++|+..+|+.+++++... ..||
T Consensus 80 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f~~~~~~~~~~------~~kp-------------- 138 (190)
T 2fi1_A 80 HPILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFTEVVTSSSGF------KRKP-------------- 138 (190)
T ss_dssp SCCBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEEEEECGGGCC------CCTT--------------
T ss_pred cCccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhheeeeeeccccC------CCCC--------------
Confidence 445899999999999999999999999874 6888999999999999988765421 2344
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEe
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVM 196 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~ 196 (275)
|...++.++..++.. +|++|||+.+|+.+|+.+|...+.+
T Consensus 139 -----~~~~~~~~~~~~~~~---~~~~iGD~~~Di~~a~~aG~~~~~~ 178 (190)
T 2fi1_A 139 -----NPESMLYLREKYQIS---SGLVIGDRPIDIEAGQAAGLDTHLF 178 (190)
T ss_dssp -----SCHHHHHHHHHTTCS---SEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred -----CHHHHHHHHHHcCCC---eEEEEcCCHHHHHHHHHcCCeEEEE
Confidence 347888888887653 8999999999999998877754443
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.6e-19 Score=146.45 Aligned_cols=127 Identities=14% Similarity=0.124 Sum_probs=97.7
Q ss_pred HhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCC
Q 044553 67 LKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCN 146 (275)
Q Consensus 67 ~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~ 146 (275)
.....++||+.++|+.|+++ ++++++||+... ++.+|+..+|+.+++++... ..||
T Consensus 101 ~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f~~~~~~~~~~------~~kp------------ 156 (230)
T 3vay_A 101 RHQVQIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYFAFALCAEDLG------IGKP------------ 156 (230)
T ss_dssp HTCCCBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGCSEEEEHHHHT------CCTT------------
T ss_pred hccCccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHeeeeEEccccC------CCCc------------
Confidence 45678999999999999998 999999998765 67889999999988765421 2344
Q ss_pred cCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCC-CCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChH
Q 044553 147 LCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGE 225 (275)
Q Consensus 147 ~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 225 (275)
|..+++.++..++.. +++|++|||+. +|+.+|+.+|...+.+.+++.+... .. .+ ...++++.
T Consensus 157 -------~~~~~~~~~~~~~~~-~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~--~~-----~~-~~~~~~l~ 220 (230)
T 3vay_A 157 -------DPAPFLEALRRAKVD-ASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA--DR-----LP-DAEIHNLS 220 (230)
T ss_dssp -------SHHHHHHHHHHHTCC-GGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS--SS-----CC-SEEESSGG
T ss_pred -------CHHHHHHHHHHhCCC-chheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc--cC-----CC-CeeECCHH
Confidence 458888888888776 58999999997 9999999999877766655442211 11 11 33679999
Q ss_pred HHHHHHHH
Q 044553 226 ELEQILLH 233 (275)
Q Consensus 226 el~~~l~~ 233 (275)
||.++|.+
T Consensus 221 el~~~l~~ 228 (230)
T 3vay_A 221 QLPEVLAR 228 (230)
T ss_dssp GHHHHHHT
T ss_pred HHHHHHHh
Confidence 99988764
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=2.9e-18 Score=139.49 Aligned_cols=171 Identities=19% Similarity=0.279 Sum_probs=117.0
Q ss_pred ceEEEEEcCCcccCCccHHHHHHHhCCChHHHh----hcC-CCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHH
Q 044553 3 GIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQ----LLP-TMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVV 77 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~ 77 (275)
+|+|+||+||||+|+++...+.+.+|.+..... ... ...+...+..... ...+...+.+.+.+.+..++|++.
T Consensus 5 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~ 82 (211)
T 1l7m_A 5 KKLILFDFDSTLVNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVS--LLKDLPIEKVEKAIKRITPTEGAE 82 (211)
T ss_dssp CEEEEEECCCCCBSSCHHHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHH--TTTTCBHHHHHHHHHTCCBCTTHH
T ss_pred CcEEEEeCCCCCCCccHHHHHHHHhCcHHHHHHHHHHHHcCCCCHHHHHHHHHH--HhcCCCHHHHHHHHHhCCCCccHH
Confidence 589999999999999888888888887532211 111 1222222221111 112333344555556778899999
Q ss_pred HHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHH
Q 044553 78 PAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVV 157 (275)
Q Consensus 78 e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~ 157 (275)
++|+.|+++|++++|+|++....++..++.+|+..+|+.++... ++...++...+ . ..+.+|+..
T Consensus 83 ~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~---------~-~~~~~K~~~ 147 (211)
T 1l7m_A 83 ETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVK-----DGKLTGDVEGE---------V-LKENAKGEI 147 (211)
T ss_dssp HHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEE-----TTEEEEEEECS---------S-CSTTHHHHH
T ss_pred HHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEE-----CCEEcCCcccC---------c-cCCccHHHH
Confidence 99999999999999999999888889999999877665443211 11112221110 0 113458999
Q ss_pred HHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 158 IERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 158 l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
+..++..++.. +++|++||||.+|+.+++.+|.
T Consensus 148 l~~~~~~lgi~-~~~~~~iGD~~~Di~~~~~ag~ 180 (211)
T 1l7m_A 148 LEKIAKIEGIN-LEDTVAVGDGANDISMFKKAGL 180 (211)
T ss_dssp HHHHHHHHTCC-GGGEEEEECSGGGHHHHHHCSE
T ss_pred HHHHHHHcCCC-HHHEEEEecChhHHHHHHHCCC
Confidence 99999988765 5899999999999999988776
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.1e-19 Score=151.23 Aligned_cols=191 Identities=15% Similarity=0.164 Sum_probs=118.0
Q ss_pred ceEEEEEcCCcccCCcc-----HHHHHHHhCCChHH------Hhh---cCCCChHHHHHHHHHHHHhCCCC----HHHHH
Q 044553 3 GIVVIFDFDKTIIDCDS-----DNFVVDELGATDLF------NQL---LPTMPWNSLMDRMMKELHSQGKT----IEDIV 64 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~------~~~---~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 64 (275)
+++|+||+||||+|+.. +..+++.+|.+... ... .+.......+........ .... .+.+.
T Consensus 11 ~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 89 (231)
T 2p11_A 11 DIVFLFDCDNTLLDNDHVLADLRAHMMREFGAQNSARYWEIFETLRTELGYADYLGALQRYRLEQP-RDTRLLLMSSFLI 89 (231)
T ss_dssp SEEEEECCBTTTBCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHCT-TCTGGGGGHHHHH
T ss_pred CeEEEEcCCCCCEecHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHhcCchHHHHHHHHHHhccc-cchHHHHHHHHHH
Confidence 57999999999999865 34567777764221 111 121112222222211110 0111 11122
Q ss_pred HHHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCC
Q 044553 65 EVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHG 144 (275)
Q Consensus 65 ~~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~ 144 (275)
.......++||+.++|+.|+++| +++|+||++...++..++++|+.++|+.+++.. ..
T Consensus 90 ~~~~~~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f~~~~~~~---------~~------------ 147 (231)
T 2p11_A 90 DYPFASRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEVEGRVLIY---------IH------------ 147 (231)
T ss_dssp HCCGGGGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHTTTCEEEE---------SS------------
T ss_pred HHHHhCCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhcCeeEEec---------CC------------
Confidence 22345689999999999999999 999999999999999999999998887654310 11
Q ss_pred CCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCC---CcccccccCCCCeEeecCCc--hhhHHHhhCCCceeEEEe
Q 044553 145 CNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSG---DYCPSLKLSEGDHVMPRKNF--PLWDLIIRNPMLIKAEIH 219 (275)
Q Consensus 145 ~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~---Di~~a~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~ 219 (275)
|...++.+.. +. .|++|+|||||.+ |+.+|+++|...+++..+.+ +...+..... + ..
T Consensus 148 ---------K~~~~~~~~~--~~-~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~--~---~~ 210 (231)
T 2p11_A 148 ---------KELMLDQVME--CY-PARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPP--A---DV 210 (231)
T ss_dssp ---------GGGCHHHHHH--HS-CCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCC--C---SE
T ss_pred ---------hHHHHHHHHh--cC-CCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCC--C---ce
Confidence 2233444443 23 3689999999998 88899888887666654322 2222222110 1 22
Q ss_pred eCCChHHHHHHHHH
Q 044553 220 EWTDGEELEQILLH 233 (275)
Q Consensus 220 ~~~~~~el~~~l~~ 233 (275)
.++++.||.+++.+
T Consensus 211 ~i~~~~el~~~l~~ 224 (231)
T 2p11_A 211 TVERIGDLVEMDAE 224 (231)
T ss_dssp EESSGGGGGGCGGG
T ss_pred eecCHHHHHHHHHH
Confidence 56888888776654
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.75 E-value=9.4e-18 Score=147.61 Aligned_cols=206 Identities=14% Similarity=0.174 Sum_probs=143.3
Q ss_pred ceEEEEEcCCcccCCccHHHHHHHhCCChHHHh----h-cCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHH
Q 044553 3 GIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQ----L-LPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVV 77 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~ 77 (275)
.++|+||+||||++.+....+.+.+|....... . .....+...+...+..+ .+...+.+......++++||+.
T Consensus 107 ~~~viFD~DgTLi~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~pg~~ 184 (335)
T 3n28_A 107 PGLIVLDMDSTAIQIECIDEIAKLAGVGEEVAEVTERAMQGELDFEQSLRLRVSKL--KDAPEQILSQVRETLPLMPELP 184 (335)
T ss_dssp CCEEEECSSCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTT--TTCBTTHHHHHHTTCCCCTTHH
T ss_pred CCEEEEcCCCCCcChHHHHHHHHHcCCchHHHHHHHHHhcCCCCHHHHHHHHHHHh--cCCCHHHHHHHHHhCCcCcCHH
Confidence 579999999999998888888888887643321 1 22334444444433322 2333445556667889999999
Q ss_pred HHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHH
Q 044553 78 PAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVV 157 (275)
Q Consensus 78 e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~ 157 (275)
++|+.|+++|++++|+||+....++.+++++|+..+|+..+... +|.+.+....+ ...+.+|...
T Consensus 185 ~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~-----d~~~tg~~~~~----------~~~~kpk~~~ 249 (335)
T 3n28_A 185 ELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIV-----SGKLTGQVLGE----------VVSAQTKADI 249 (335)
T ss_dssp HHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEE-----TTEEEEEEESC----------CCCHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEee-----CCeeeeeeccc----------ccChhhhHHH
Confidence 99999999999999999999999999999999988777554211 22222211100 0112348899
Q ss_pred HHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHHHHHHHH
Q 044553 158 IERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHLVN 236 (275)
Q Consensus 158 l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~l~~~~~ 236 (275)
++.++..++.. +++|+|||||.+|+.+++.+|. .+++ .+. +.+.+... . +....++.++..+|+..+.
T Consensus 250 ~~~~~~~lgi~-~~~~v~vGDs~nDi~~a~~aG~-~va~--~~~---~~~~~~a~---~-v~~~~~l~~v~~~L~~~l~ 317 (335)
T 3n28_A 250 LLTLAQQYDVE-IHNTVAVGDGANDLVMMAAAGL-GVAY--HAK---PKVEAKAQ---T-AVRFAGLGGVVCILSAALV 317 (335)
T ss_dssp HHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSE-EEEE--SCC---HHHHTTSS---E-EESSSCTHHHHHHHHHHHH
T ss_pred HHHHHHHcCCC-hhhEEEEeCCHHHHHHHHHCCC-eEEe--CCC---HHHHhhCC---E-EEecCCHHHHHHHHHhHHH
Confidence 99999998876 4899999999999999988775 3443 332 22322222 1 4478999999999998874
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.5e-18 Score=146.85 Aligned_cols=167 Identities=8% Similarity=0.075 Sum_probs=109.1
Q ss_pred ceEEEEEcCCcccCCccH------------HHHHHHhCCChHHHhh---cCCCChHHHHHHHHHHHHhCCCC---HHH--
Q 044553 3 GIVVIFDFDKTIIDCDSD------------NFVVDELGATDLFNQL---LPTMPWNSLMDRMMKELHSQGKT---IED-- 62 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~------------~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~---~~~-- 62 (275)
.++|+||+||||+|++.. ...+..++......+. ..+.......+.+...+.. ... .+.
T Consensus 31 ikaviFDlDGTLvDs~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~-~~~~~~~~~~~ 109 (253)
T 2g80_A 31 YSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQAHILELVAK-DVKDPILKQLQ 109 (253)
T ss_dssp CSEEEECCBTTTBCTHHHHHTHHHHHHHHHHHHHHSCCTTSHHHHHHHTTCCCCHHHHHHHHHHHHHT-TCCCHHHHHHH
T ss_pred CcEEEEcCCCCcccccccchhhHHHHHHHHHHHHHHhcCcHHHHHHHHHhhhccHHHHHHHHHHHHhc-ccchHHHHHHH
Confidence 689999999999999632 1223333443222222 2222344444433333221 111 111
Q ss_pred ---HHHHHh----cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHc--C---------CcCCcceEecCCCcc
Q 044553 63 ---IVEVLK----RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHL--G---------IRDCFSEINTNPGFV 124 (275)
Q Consensus 63 ---~~~~~~----~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~--g---------l~~~fd~i~~~~~~~ 124 (275)
+...+. ...++||+.++|+. |++++|+||++...++.+++++ | +.++|+.++... .
T Consensus 110 ~~~~~~~~~~~~~~~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~~--~ 183 (253)
T 2g80_A 110 GYVWAHGYESGQIKAPVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDIN--T 183 (253)
T ss_dssp HHHHHHHHHTTSCCBCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHH--H
T ss_pred HHHHHHHHHhCcccCCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcceEEeee--c
Confidence 122222 35789999999988 8999999999999999999976 4 666677665431 1
Q ss_pred CCCCceeecccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCc
Q 044553 125 DEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNF 201 (275)
Q Consensus 125 ~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~ 201 (275)
.| .||+| +++..++.+++.. |++|+||||+.+|+.+|+++|+..+++.+.+.
T Consensus 184 --~g---~KP~p-------------------~~~~~a~~~lg~~-p~~~l~vgDs~~di~aA~~aG~~~i~v~~~~~ 235 (253)
T 2g80_A 184 --SG---KKTET-------------------QSYANILRDIGAK-ASEVLFLSDNPLELDAAAGVGIATGLASRPGN 235 (253)
T ss_dssp --HC---CTTCH-------------------HHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEEECCTTS
T ss_pred --cC---CCCCH-------------------HHHHHHHHHcCCC-cccEEEEcCCHHHHHHHHHcCCEEEEEcCCCC
Confidence 01 37766 6677777777665 58999999999999999999998887766543
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=5.3e-18 Score=139.61 Aligned_cols=137 Identities=12% Similarity=0.108 Sum_probs=97.0
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCC---------------HHHHHHHHHHcCCcCCcceEecCCCccC------C
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDAN---------------LFFIETILEHLGIRDCFSEINTNPGFVD------E 126 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~---------------~~~i~~~l~~~gl~~~fd~i~~~~~~~~------~ 126 (275)
....++||+.++|++|+++|++++|+||++ ...++..++++|+. |+.++.+....+ .
T Consensus 47 ~~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~~~~~~~~~~~~~~~~~~ 124 (211)
T 2gmw_A 47 DNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIYYCPHHPQGSVEEFR 124 (211)
T ss_dssp GGCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCBTTCSSGGGB
T ss_pred ccCcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eEEEEECCcCCCCcccccC
Confidence 357889999999999999999999999999 47889999999997 776654322100 0
Q ss_pred CCceeecccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCC-eEeecCCchhhH
Q 044553 127 EGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGD-HVMPRKNFPLWD 205 (275)
Q Consensus 127 ~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~-~~~~~~~~~~~~ 205 (275)
+.....|| |..+++.++.+++.. +++|+||||+.+|+.+|+++|... +++. .++...+
T Consensus 125 ~~~~~~KP-------------------~p~~~~~~~~~lgi~-~~~~~~VGD~~~Di~~a~~aG~~~~i~v~-~g~~~~~ 183 (211)
T 2gmw_A 125 QVCDCRKP-------------------HPGMLLSARDYLHID-MAASYMVGDKLEDMQAAVAANVGTKVLVR-TGKPITP 183 (211)
T ss_dssp SCCSSSTT-------------------SCHHHHHHHHHHTBC-GGGCEEEESSHHHHHHHHHTTCSEEEEES-SSSCCCH
T ss_pred ccCcCCCC-------------------CHHHHHHHHHHcCCC-HHHEEEEcCCHHHHHHHHHCCCceEEEEe-cCCCccc
Confidence 00112333 457888888888765 589999999999999999999877 5554 3432222
Q ss_pred HHhhCCCceeEEEeeCCChHHHHHHHHH
Q 044553 206 LIIRNPMLIKAEIHEWTDGEELEQILLH 233 (275)
Q Consensus 206 l~~~~~~~~~~~~~~~~~~~el~~~l~~ 233 (275)
.....+ ...++++.||.+++..
T Consensus 184 ~~~~~~------d~vi~~l~el~~~l~~ 205 (211)
T 2gmw_A 184 EAENAA------DWVLNSLADLPQAIKK 205 (211)
T ss_dssp HHHHHC------SEEESCGGGHHHHHHC
T ss_pred cccCCC------CEEeCCHHHHHHHHHh
Confidence 222211 2257889999887653
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.73 E-value=3.4e-18 Score=146.11 Aligned_cols=165 Identities=12% Similarity=-0.004 Sum_probs=112.8
Q ss_pred ceEEEEEcCCcccCCccH-----HHHHHHhC-CChH-HHhhcCCCChHHHHHHHHHHHHhCCCCHHH---HH----H-HH
Q 044553 3 GIVVIFDFDKTIIDCDSD-----NFVVDELG-ATDL-FNQLLPTMPWNSLMDRMMKELHSQGKTIED---IV----E-VL 67 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~-----~~~~~~~g-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~-~~ 67 (275)
+++|+||+||||++++.. ..+++++| .... ......+.......+.+. ......+. +. + ..
T Consensus 35 ik~iifDlDGTLlds~~~~~~~~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 110 (275)
T 2qlt_A 35 INAALFDVDGTIIISQPAIAAFWRDFGKDKPYFDAEHVIHISHGWRTYDAIAKFA----PDFADEEYVNKLEGEIPEKYG 110 (275)
T ss_dssp ESEEEECCBTTTEECHHHHHHHHHHHHTTCTTCCHHHHHHHCTTCCHHHHHHHHC----GGGCCHHHHHHHHHTHHHHHC
T ss_pred CCEEEECCCCCCCCCHHHHHHHHHHHHHHcCCCCHHHHHHHhcCCCHHHHHHHHh----ccCCcHHHHHHHHHHHHHHHh
Confidence 589999999999999742 34555556 3321 112222233333222221 11111111 11 1 12
Q ss_pred hcCCCCCCHHHHHHHHHHc-CCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCC
Q 044553 68 KRIPIHPRVVPAIKSAHAL-GCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCN 146 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~-g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~ 146 (275)
....++||+.++|+.|+++ |++++|+||+....++..++.+|+. +|+.+++++... ..||
T Consensus 111 ~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~-~f~~i~~~~~~~------~~kp------------ 171 (275)
T 2qlt_A 111 EHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK-RPEYFITANDVK------QGKP------------ 171 (275)
T ss_dssp TTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC-CCSSEECGGGCS------SCTT------------
T ss_pred cCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC-ccCEEEEcccCC------CCCC------------
Confidence 4467899999999999999 9999999999999999999999986 478777765421 3344
Q ss_pred cCCCCCchHHHHHHHHHhhhc-------CCCCeEEEEcCCCCCcccccccCCCCeEeec
Q 044553 147 LCPPNMCKGVVIERIQASLSK-------EGNKKIIYLGDGSGDYCPSLKLSEGDHVMPR 198 (275)
Q Consensus 147 ~~~~~~~K~~~l~~~~~~~~~-------~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~ 198 (275)
|+..+..++..++. . +++|++|||+.+|+.+|+.+|...+.+..
T Consensus 172 -------~~~~~~~~~~~lgi~~~~~~~~-~~~~i~~GDs~nDi~~a~~AG~~~i~v~~ 222 (275)
T 2qlt_A 172 -------HPEPYLKGRNGLGFPINEQDPS-KSKVVVFEDAPAGIAAGKAAGCKIVGIAT 222 (275)
T ss_dssp -------SSHHHHHHHHHTTCCCCSSCGG-GSCEEEEESSHHHHHHHHHTTCEEEEESS
T ss_pred -------ChHHHHHHHHHcCCCccccCCC-cceEEEEeCCHHHHHHHHHcCCEEEEECC
Confidence 34778888888876 5 58999999999999999998876566554
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.4e-18 Score=160.68 Aligned_cols=172 Identities=13% Similarity=0.109 Sum_probs=110.2
Q ss_pred CCceEEEEEcCCcccCCccH---HHHHHHhCCChH-HH-------------hh-cCCCChHHHHHHHHHHH----HhCCC
Q 044553 1 MSGIVVIFDFDKTIIDCDSD---NFVVDELGATDL-FN-------------QL-LPTMPWNSLMDRMMKEL----HSQGK 58 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~---~~~~~~~g~~~~-~~-------------~~-~~~~~~~~~~~~~~~~~----~~~~~ 58 (275)
|++|+|+||+||||+++... ......++.... .. .. .+............... .....
T Consensus 1 M~~k~viFD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (555)
T 3i28_A 1 MTLRAAVFDLDGVLALPAVFGVLGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITLSQWIPLMEENCRKCSETAKV 80 (555)
T ss_dssp ---CEEEECTBTTTEESCTHHHHHHHHHHTTCCTTHHHHHHHTTGGGSHHHHHHTTSSCHHHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEEEecCCeeecchhHHHHHHHHHHhCCcHHHHHHHHhccCcccchhHHhcCCCCHHHHHHHHHHHHHHhhhccCC
Confidence 78899999999999987653 334445555311 11 11 11122222222222111 11110
Q ss_pred ------CHH-HHHHHHhcCCCCCCHHHHHHHHHHcCCcEEEEeCC--CHHHHHHHHHHc--CCcCCcceEecCCCccCCC
Q 044553 59 ------TIE-DIVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDA--NLFFIETILEHL--GIRDCFSEINTNPGFVDEE 127 (275)
Q Consensus 59 ------~~~-~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~--~~~~i~~~l~~~--gl~~~fd~i~~~~~~~~~~ 127 (275)
..+ .+.+......++||+.++|+.|+++|++++|+||+ ........+... |+..+||.|++++...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~fd~i~~~~~~~--- 157 (555)
T 3i28_A 81 CLPKNFSIKEIFDKAISARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVG--- 157 (555)
T ss_dssp CCCTTCCHHHHHHHHHHHCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHT---
T ss_pred CCCccccHHHHHHHhHhhcCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhheeEEEeccccC---
Confidence 122 24445567899999999999999999999999998 222222333333 7778999999876532
Q ss_pred CceeecccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeec
Q 044553 128 GRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPR 198 (275)
Q Consensus 128 g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~ 198 (275)
..||+| ++++.++.+++.. |++|+||||+.+|+.+|+++|+..+++..
T Consensus 158 ---~~KP~p-------------------~~~~~~~~~lg~~-p~~~~~v~D~~~di~~a~~aG~~~~~~~~ 205 (555)
T 3i28_A 158 ---MVKPEP-------------------QIYKFLLDTLKAS-PSEVVFLDDIGANLKPARDLGMVTILVQD 205 (555)
T ss_dssp ---CCTTCH-------------------HHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHHTCEEEECSS
T ss_pred ---CCCCCH-------------------HHHHHHHHHcCCC-hhHEEEECCcHHHHHHHHHcCCEEEEECC
Confidence 457755 6778888888765 58999999999999999999987666654
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=99.70 E-value=3.2e-17 Score=132.25 Aligned_cols=99 Identities=18% Similarity=0.193 Sum_probs=82.0
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCC-HHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCC
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDAN-LFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCN 146 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~-~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~ 146 (275)
....++||+.++|+.|+++|++++|+||++ ...++.+++.+|+..+|+.++... +|
T Consensus 65 ~~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~~~~~~~-----------~~------------ 121 (187)
T 2wm8_A 65 QDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIYP-----------GS------------ 121 (187)
T ss_dssp CEECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEEEEEESS-----------SC------------
T ss_pred cccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcceeEEEe-----------Cc------------
Confidence 356789999999999999999999999998 789999999999999999874321 11
Q ss_pred cCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEee
Q 044553 147 LCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMP 197 (275)
Q Consensus 147 ~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~ 197 (275)
|...++.++.+++.. +++|+||||+.+|+.+|+++|...+.+.
T Consensus 122 -------k~~~~~~~~~~~~~~-~~~~~~igD~~~Di~~a~~aG~~~i~v~ 164 (187)
T 2wm8_A 122 -------KITHFERLQQKTGIP-FSQMIFFDDERRNIVDVSKLGVTCIHIQ 164 (187)
T ss_dssp -------HHHHHHHHHHHHCCC-GGGEEEEESCHHHHHHHHTTTCEEEECS
T ss_pred -------hHHHHHHHHHHcCCC-hHHEEEEeCCccChHHHHHcCCEEEEEC
Confidence 557777888877765 5899999999999999988887655443
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.70 E-value=8.3e-19 Score=133.59 Aligned_cols=98 Identities=8% Similarity=-0.007 Sum_probs=80.7
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCC
Q 044553 73 HPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNM 152 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~ 152 (275)
+||+.++|+.|+++|++++|+||++...++..++++|+..+|+.+++++... ..||.|
T Consensus 20 ~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~------~~Kp~~---------------- 77 (137)
T 2pr7_A 20 QRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLSGELG------VEKPEE---------------- 77 (137)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEEEHHHHS------CCTTSH----------------
T ss_pred CccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEEEeccCC------CCCCCH----------------
Confidence 5788899999999999999999999999999999999999999988765321 345544
Q ss_pred chHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEe
Q 044553 153 CKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVM 196 (275)
Q Consensus 153 ~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~ 196 (275)
..++.++.+++.. +++++||||+.+|+.+|+++|+..+.+
T Consensus 78 ---~~~~~~~~~~~~~-~~~~~~vgD~~~di~~a~~~G~~~i~~ 117 (137)
T 2pr7_A 78 ---AAFQAAADAIDLP-MRDCVLVDDSILNVRGAVEAGLVGVYY 117 (137)
T ss_dssp ---HHHHHHHHHTTCC-GGGEEEEESCHHHHHHHHHHTCEEEEC
T ss_pred ---HHHHHHHHHcCCC-cccEEEEcCCHHHHHHHHHCCCEEEEe
Confidence 6777788777665 589999999999999998888754444
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1e-17 Score=134.15 Aligned_cols=109 Identities=17% Similarity=0.272 Sum_probs=78.5
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCC---------------CHHHHHHHHHHcCCcCCcceEecCCCccCCCCceee
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDA---------------NLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRI 132 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~---------------~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~ 132 (275)
....++||+.++|+.|+++|++++|+||+ ....++.+++++|+. |+.++.+.... .+.....
T Consensus 39 ~~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v~~s~~~~-~~~~~~~ 115 (176)
T 2fpr_A 39 DKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLP-ADECDCR 115 (176)
T ss_dssp GGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCG-GGCCSSS
T ss_pred HHCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEEEEcCCCC-ccccccc
Confidence 45788999999999999999999999998 577899999999997 88876331000 0011134
Q ss_pred cccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 133 FPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 133 kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
||.|+ +++.++.+++.. +++++||||+.+|+.+|+++|+..+.+.+.
T Consensus 116 KP~p~-------------------~~~~~~~~~gi~-~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~ 162 (176)
T 2fpr_A 116 KPKVK-------------------LVERYLAEQAMD-RANSYVIGDRATDIQLAENMGINGLRYDRE 162 (176)
T ss_dssp TTSCG-------------------GGGGGC----CC-GGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred CCCHH-------------------HHHHHHHHcCCC-HHHEEEEcCCHHHHHHHHHcCCeEEEEcCC
Confidence 67663 333444444444 589999999999999999988876666544
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=1.6e-16 Score=135.18 Aligned_cols=115 Identities=19% Similarity=0.242 Sum_probs=84.6
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCC
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPP 150 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~ 150 (275)
.++||+.++|+.|+++|++++|+||+....++.+++++|+..+|+.+++.+
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~~~~----------------------------- 194 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDDYFAEVLPHE----------------------------- 194 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCGGG-----------------------------
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChhHhHhcCHHH-----------------------------
Confidence 689999999999999999999999999999999999999998887766432
Q ss_pred CCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHH
Q 044553 151 NMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQI 230 (275)
Q Consensus 151 ~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~ 230 (275)
|...++.+... -+++|||||.+|+.+++.+| +.++.++.. .. ..+. ... +...+++.+|..+
T Consensus 195 ---k~~~~k~~~~~------~~~~~vGD~~nDi~~~~~Ag---~~va~~~~~-~~-~~~~---a~~-~~~~~~~~~l~~~ 256 (280)
T 3skx_A 195 ---KAEKVKEVQQK------YVTAMVGDGVNDAPALAQAD---VGIAIGAGT-DV-AVET---ADI-VLVRNDPRDVAAI 256 (280)
T ss_dssp ---HHHHHHHHHTT------SCEEEEECTTTTHHHHHHSS---EEEECSCCS-SS-CCCS---SSE-ECSSCCTHHHHHH
T ss_pred ---HHHHHHHHHhc------CCEEEEeCCchhHHHHHhCC---ceEEecCCc-HH-HHhh---CCE-EEeCCCHHHHHHH
Confidence 45555555443 37999999999999998766 344433211 11 1111 111 3344899999888
Q ss_pred HH
Q 044553 231 LL 232 (275)
Q Consensus 231 l~ 232 (275)
++
T Consensus 257 l~ 258 (280)
T 3skx_A 257 VE 258 (280)
T ss_dssp HH
T ss_pred HH
Confidence 86
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=99.64 E-value=8.8e-17 Score=132.81 Aligned_cols=143 Identities=13% Similarity=0.119 Sum_probs=94.6
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCH---------------HHHHHHHHHcCCcCCcceEecCCCccCCCCceee
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANL---------------FFIETILEHLGIRDCFSEINTNPGFVDEEGRLRI 132 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~---------------~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~ 132 (275)
....++||+.++|+.|+++|++++|+||++. ..++..++++|+. |+.++.+.... +|.+.
T Consensus 53 ~~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--~~~~~~~~~~~--~g~~~- 127 (218)
T 2o2x_A 53 AEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF--VDMVLACAYHE--AGVGP- 127 (218)
T ss_dssp GGCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCCT--TCCST-
T ss_pred ccCeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc--eeeEEEeecCC--CCcee-
Confidence 4577899999999999999999999999987 7889999999985 55543222110 01100
Q ss_pred cccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCC-eEeecCCchhhHHHhhCC
Q 044553 133 FPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGD-HVMPRKNFPLWDLIIRNP 211 (275)
Q Consensus 133 kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~-~~~~~~~~~~~~l~~~~~ 211 (275)
.. .+.+..+++|..+++.++.+++.. +++++||||+.+|+.+|+++|... +.+. .+......
T Consensus 128 -~~---------~~~~~~~KP~~~~~~~~~~~~~i~-~~~~~~VGD~~~Di~~a~~aG~~~~i~v~-~g~~~~~~----- 190 (218)
T 2o2x_A 128 -LA---------IPDHPMRKPNPGMLVEAGKRLALD-LQRSLIVGDKLADMQAGKRAGLAQGWLVD-GEAAVQPG----- 190 (218)
T ss_dssp -TC---------CSSCTTSTTSCHHHHHHHHHHTCC-GGGCEEEESSHHHHHHHHHTTCSEEEEET-CCCEEETT-----
T ss_pred -ec---------ccCCccCCCCHHHHHHHHHHcCCC-HHHEEEEeCCHHHHHHHHHCCCCEeEEEe-cCCCCccc-----
Confidence 00 000112233457888888888765 589999999999999999988876 5544 34321111
Q ss_pred CceeEEEeeCCChHHHHHHHHH
Q 044553 212 MLIKAEIHEWTDGEELEQILLH 233 (275)
Q Consensus 212 ~~~~~~~~~~~~~~el~~~l~~ 233 (275)
....+ ...++++.||.+.+++
T Consensus 191 ~~~~~-~~~i~~l~el~~~l~~ 211 (218)
T 2o2x_A 191 FAIRP-LRDSSELGDLLAAIET 211 (218)
T ss_dssp EEEEE-ESSHHHHHHHHHHHHH
T ss_pred ccCCC-CEecccHHHHHHHHHH
Confidence 01122 3356788888776653
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=99.62 E-value=1.8e-17 Score=136.61 Aligned_cols=152 Identities=15% Similarity=0.078 Sum_probs=92.0
Q ss_pred CCceEEEEEcCCcccCCccHHHHH-HHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHH
Q 044553 1 MSGIVVIFDFDKTIIDCDSDNFVV-DELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPA 79 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~ 79 (275)
|++++|+||+||||+|+....+.. ..+... . ..+. .... .+..+.. + +.....++|++.++
T Consensus 35 ~~~kaviFDlDGTL~Ds~~~~~~~~~~~~~~-~-~~~~---~~~~----~~~~~~~-~--------~~~~~~~~~~~~e~ 96 (211)
T 2b82_A 35 RPPMAVGFDIDDTVLFSSPGFWRGKKTFSPE-S-EDYL---KNPV----FWEKMNN-G--------WDEFSIPKEVARQL 96 (211)
T ss_dssp CCCCEEEECCBTTTEECHHHHHHHHHHHCTT-S-SGGG---GCHH----HHHHHHT-T--------GGGGCEECHHHHHH
T ss_pred CCCCEEEEcCCCCCCcCcHHHHHHHHHhhHH-H-HHHh---hhHH----HHHHHHH-h--------HHhcCCCcHHHHHH
Confidence 347899999999999987633211 111110 0 0000 0011 1111111 0 01123357899999
Q ss_pred HHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHHH
Q 044553 80 IKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIE 159 (275)
Q Consensus 80 L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~ 159 (275)
|+.|+++|++++|+||++...++.+++. +.++|+.++.+..... ....||.|+ .+.
T Consensus 97 l~~L~~~G~~l~ivTn~~~~~~~~~l~~--l~~~f~~i~~~~~~~~---~~~~KP~p~-------------------~~~ 152 (211)
T 2b82_A 97 IDMHVRRGDAIFFVTGRSPTKTETVSKT--LADNFHIPATNMNPVI---FAGDKPGQN-------------------TKS 152 (211)
T ss_dssp HHHHHHHTCEEEEEECSCCCSSCCHHHH--HHHHTTCCTTTBCCCE---ECCCCTTCC-------------------CSH
T ss_pred HHHHHHCCCEEEEEcCCcHHHHHHHHHH--HHHhcCccccccchhh---hcCCCCCHH-------------------HHH
Confidence 9999999999999999987766666666 5566776643221100 012477664 223
Q ss_pred HHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 160 RIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 160 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
.++.+++. |+||||+.+|+.+|+++|+..+.+.++
T Consensus 153 ~~~~~~g~-----~l~VGDs~~Di~aA~~aG~~~i~v~~g 187 (211)
T 2b82_A 153 QWLQDKNI-----RIFYGDSDNDITAARDVGARGIRILRA 187 (211)
T ss_dssp HHHHHTTE-----EEEEESSHHHHHHHHHTTCEEEECCCC
T ss_pred HHHHHCCC-----EEEEECCHHHHHHHHHCCCeEEEEecC
Confidence 44555432 999999999999999999877766543
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=4.2e-17 Score=132.19 Aligned_cols=147 Identities=12% Similarity=0.074 Sum_probs=97.4
Q ss_pred ceEEEEEcCCcccCCccH-HHHHHHh--CCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHH------hcCCCC
Q 044553 3 GIVVIFDFDKTIIDCDSD-NFVVDEL--GATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVL------KRIPIH 73 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~-~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 73 (275)
+++|+||+||||+|+... ...+... |.+....+..........+ ..+. ....+.+.+.+ ....++
T Consensus 2 ~k~viFDlDGTL~Ds~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 75 (193)
T 2i7d_A 2 SVRVLVDMDGVLADFEAGLLRGFRRRFPEEPHVPLEQRRGFLAREQY----RALR--PDLADKVASVYEAPGFFLDLEPI 75 (193)
T ss_dssp CEEEEECSBTTTBCHHHHHHHHHHHHSTTSCCCCGGGCCSSCHHHHH----HHHC--TTHHHHHHHHHTSTTTTTTCCBC
T ss_pred CcEEEEECCCcCccchhHHHHHHHHHhcCCCCCCHHHHHHhhHHHHH----HHHh--HHHHHHHHHHHHhcCccccCccC
Confidence 589999999999999653 2222222 5432112222222222222 2211 11123333322 346789
Q ss_pred CCHHHHHHHHHHc-CCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCC
Q 044553 74 PRVVPAIKSAHAL-GCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNM 152 (275)
Q Consensus 74 pg~~e~L~~L~~~-g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~ 152 (275)
||+.++|+.|+++ |++++|+||++...++..++++|+ |+.+++.+
T Consensus 76 ~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl---f~~i~~~~------------------------------- 121 (193)
T 2i7d_A 76 PGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW---VEQHLGPQ------------------------------- 121 (193)
T ss_dssp TTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH---HHHHHCHH-------------------------------
T ss_pred cCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc---hhhhcCHH-------------------------------
Confidence 9999999999999 999999999999899999999988 77666421
Q ss_pred chHHHHHHHHHhhhcCCCCeEEEEcCCCCC----ccccc-ccCCCCeEeec
Q 044553 153 CKGVVIERIQASLSKEGNKKIIYLGDGSGD----YCPSL-KLSEGDHVMPR 198 (275)
Q Consensus 153 ~K~~~l~~~~~~~~~~~~~~~i~vGDs~~D----i~~a~-~~~~~~~~~~~ 198 (275)
.+.+++.. |++|+||||+.+| +.+|+ ++|+..+.+..
T Consensus 122 --------~~~~~~~~-~~~~~~vgDs~~dD~~~i~~A~~~aG~~~i~~~~ 163 (193)
T 2i7d_A 122 --------FVERIILT-RDKTVVLGDLLIDDKDTVRGQEETPSWEHILFTC 163 (193)
T ss_dssp --------HHTTEEEC-SCGGGBCCSEEEESSSCCCSSCSSCSSEEEEECC
T ss_pred --------HHHHcCCC-cccEEEECCchhhCcHHHhhcccccccceEEEEe
Confidence 23333333 5799999999998 99998 88887777654
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=99.61 E-value=2.7e-17 Score=133.77 Aligned_cols=148 Identities=13% Similarity=0.050 Sum_probs=95.5
Q ss_pred CCceEEEEEcCCcccCCccH-HHHHHHh-C-CChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHH------HhcCC
Q 044553 1 MSGIVVIFDFDKTIIDCDSD-NFVVDEL-G-ATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEV------LKRIP 71 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~-~~~~~~~-g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 71 (275)
+++++|+||+||||+|+... ...+.+. . +.....+...+......+. .+. ....+++.+. .....
T Consensus 2 ~~~k~viFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~ 75 (197)
T 1q92_A 2 GRALRVLVDMDGVLADFEGGFLRKFRARFPDQPFIALEDRRGFWVSEQYG----RLR--PGLSEKAISIWESKNFFFELE 75 (197)
T ss_dssp CCCEEEEECSBTTTBCHHHHHHHHHHHHCTTSCCCCGGGCCSSCHHHHHH----HHS--TTHHHHHHHHHTSTTTTTTCC
T ss_pred CCceEEEEeCCCCCccCcHHHHHHHHHHHhcCCCCCHHHhcCCcHHHHHH----hcC--HHHHHHHHHHHHhhhhhhcCC
Confidence 35789999999999999763 2222222 1 1111111122222222222 111 1112222222 22467
Q ss_pred CCCCHHHHHHHHHHc-CCcEEEEeCCCHHHHHHHHHHcCCcC-CcceEecCCCccCCCCceeecccCCCCCCCCCCCcCC
Q 044553 72 IHPRVVPAIKSAHAL-GCELRIVSDANLFFIETILEHLGIRD-CFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCP 149 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~-g~~~~IvS~~~~~~i~~~l~~~gl~~-~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~ 149 (275)
++||+.++|+.|+++ |++++|+||++...++..++++|+.+ +|+..
T Consensus 76 ~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~f~~~-------------------------------- 123 (197)
T 1q92_A 76 PLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPD-------------------------------- 123 (197)
T ss_dssp BCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHCGG--------------------------------
T ss_pred cCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHHHhchHH--------------------------------
Confidence 899999999999999 99999999999888888999999887 77610
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCC----ccccc-ccCCCCeEeec
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGD----YCPSL-KLSEGDHVMPR 198 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~D----i~~a~-~~~~~~~~~~~ 198 (275)
.+..++.. |++|+||||+..| +.+|+ ++|+..+++..
T Consensus 124 -----------~~~~l~~~-~~~~~~vgDs~~dD~~~~~~a~~~aG~~~i~~~~ 165 (197)
T 1q92_A 124 -----------FLEQIVLT-RDKTVVSADLLIDDRPDITGAEPTPSWEHVLFTA 165 (197)
T ss_dssp -----------GGGGEEEC-SCSTTSCCSEEEESCSCCCCSCSSCSSEEEEECC
T ss_pred -----------HHHHhccC-CccEEEECcccccCCchhhhcccCCCceEEEecC
Confidence 11222232 4789999999998 99998 88887777754
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=99.60 E-value=2.1e-16 Score=140.86 Aligned_cols=141 Identities=15% Similarity=0.039 Sum_probs=100.7
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcc--eEecCCCccC----CCCc-eeecccCCCCCC
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFS--EINTNPGFVD----EEGR-LRIFPFHDFTKC 141 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd--~i~~~~~~~~----~~g~-~~~kp~~~~~~~ 141 (275)
...++||+.++|+.|+++|++++|+||++...++..++++|+..+|+ .+++++.... .... ..+||+|
T Consensus 213 ~~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P----- 287 (384)
T 1qyi_A 213 ILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNP----- 287 (384)
T ss_dssp BSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTST-----
T ss_pred CCCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEecccccccccccccccCCCCCCH-----
Confidence 35789999999999999999999999999999999999999999999 7888664310 0000 0256766
Q ss_pred CCCCCcCCCCCchHHHHHHHHHhhhc-------------CCCCeEEEEcCCCCCcccccccCCCCeEeecCCc---hhhH
Q 044553 142 SHGCNLCPPNMCKGVVIERIQASLSK-------------EGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNF---PLWD 205 (275)
Q Consensus 142 ~~~~~~~~~~~~K~~~l~~~~~~~~~-------------~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~---~~~~ 205 (275)
.++...+..++. ..|++|+|||||.+|+.+|+++|+..+++..+.. ....
T Consensus 288 --------------~~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~ 353 (384)
T 1qyi_A 288 --------------FSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGE 353 (384)
T ss_dssp --------------HHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHH
T ss_pred --------------HHHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHH
Confidence 445555555441 2368999999999999999999987666654321 1222
Q ss_pred HHhhCCCceeEEEeeCCChHHHHHHHHHH
Q 044553 206 LIIRNPMLIKAEIHEWTDGEELEQILLHL 234 (275)
Q Consensus 206 l~~~~~~~~~~~~~~~~~~~el~~~l~~~ 234 (275)
+....+ ...++++.||...++..
T Consensus 354 l~~~~a------d~vi~sl~eL~~~l~~~ 376 (384)
T 1qyi_A 354 LEAHHA------DYVINHLGELRGVLDNL 376 (384)
T ss_dssp HHHTTC------SEEESSGGGHHHHHSCT
T ss_pred HhhcCC------CEEECCHHHHHHHHHHH
Confidence 222222 22578999998877543
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.60 E-value=2e-16 Score=133.14 Aligned_cols=130 Identities=9% Similarity=-0.022 Sum_probs=90.9
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcc---eEecCCCccCCCCceeecccCCCCCCCCCCCcC
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFS---EINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLC 148 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd---~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~ 148 (275)
++|++.++++.|+ +|+++ ++||.........+...|+..+|+ .+++.+.. ..+||
T Consensus 123 ~~~~~~~~l~~l~-~~~~~-i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~Kp-------------- 180 (259)
T 2ho4_A 123 HYQLLNQAFRLLL-DGAPL-IAIHKARYYKRKDGLALGPGPFVTALEYATDTKAM------VVGKP-------------- 180 (259)
T ss_dssp BHHHHHHHHHHHH-TTCCE-EESCCCSEEEETTEEEECSHHHHHHHHHHHTCCCE------ECSTT--------------
T ss_pred CHHHHHHHHHHHH-CCCEE-EEECCCCcCcccCCcccCCcHHHHHHHHHhCCCce------EecCC--------------
Confidence 6789999999999 89999 999987665555556677777776 34443321 13455
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCC-CCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHH
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEEL 227 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el 227 (275)
|+.+++.++.+++.. +++|++|||+. +|+.+|+.+|+..+++.++.+...+.... ...+ ...++++.|+
T Consensus 181 -----~~~~~~~~~~~lgi~-~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~-~~~~---~~~~~~l~~l 250 (259)
T 2ho4_A 181 -----EKTFFLEALRDADCA-PEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKI-NPPP---YLTCESFPHA 250 (259)
T ss_dssp -----SHHHHHHHGGGGTCC-GGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGS-SSCC---SEEESCHHHH
T ss_pred -----CHHHHHHHHHHcCCC-hHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCccccccc-CCCC---CEEECCHHHH
Confidence 458888888888765 58999999998 99999999998777765542322222110 1112 2257999999
Q ss_pred HHHHHH
Q 044553 228 EQILLH 233 (275)
Q Consensus 228 ~~~l~~ 233 (275)
..++.+
T Consensus 251 ~~~l~~ 256 (259)
T 2ho4_A 251 VDHILQ 256 (259)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887764
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.59 E-value=3.5e-15 Score=128.41 Aligned_cols=115 Identities=17% Similarity=0.251 Sum_probs=84.4
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcC
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLC 148 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~ 148 (275)
...++||+.++|+.|+++|++++|+||++...++.+++.+|+..+|+.++ |.
T Consensus 161 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~---------------~~------------- 212 (287)
T 3a1c_A 161 SDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL---------------PH------------- 212 (287)
T ss_dssp ECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCC---------------TT-------------
T ss_pred ccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCceeeeecC---------------hH-------------
Confidence 35799999999999999999999999999999999999999987776543 11
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeC--CChHH
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEW--TDGEE 226 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~e 226 (275)
.|..+++.+... ++|+|||||.+|+.+++++|.. +++.. +. +.... .+ ...+ +++.+
T Consensus 213 ----~K~~~~~~l~~~------~~~~~vGDs~~Di~~a~~ag~~-v~~~~-~~---~~~~~-----~a-d~v~~~~~~~~ 271 (287)
T 3a1c_A 213 ----QKSEEVKKLQAK------EVVAFVGDGINDAPALAQADLG-IAVGS-GS---DVAVE-----SG-DIVLIRDDLRD 271 (287)
T ss_dssp ----CHHHHHHHHTTT------CCEEEEECTTTCHHHHHHSSEE-EEECC-CS---CCSSC-----CS-SEEESSSCTHH
T ss_pred ----HHHHHHHHHhcC------CeEEEEECCHHHHHHHHHCCee-EEeCC-CC---HHHHh-----hC-CEEEeCCCHHH
Confidence 266666665532 5899999999999999887764 44321 11 11111 11 1245 78888
Q ss_pred HHHHHH
Q 044553 227 LEQILL 232 (275)
Q Consensus 227 l~~~l~ 232 (275)
|..+++
T Consensus 272 l~~~l~ 277 (287)
T 3a1c_A 272 VVAAIQ 277 (287)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887664
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.59 E-value=6.5e-17 Score=134.58 Aligned_cols=172 Identities=12% Similarity=0.076 Sum_probs=101.5
Q ss_pred CCceEEEEEcCCcccCCcc-------HHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCH------HH-HHHH
Q 044553 1 MSGIVVIFDFDKTIIDCDS-------DNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTI------ED-IVEV 66 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~-------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-~~~~ 66 (275)
|++|+|+||+||||++++. ....+++.|.+........+.......+.+.. . +..... .. ...+
T Consensus 1 M~~k~i~fDlDGTLl~~~~~~~~~~~~~~~l~~~g~~~~~~t~~~g~~~~~~~~~~~~-~-g~~~~~~~~~~~~~~~~~~ 78 (250)
T 2c4n_A 1 MTIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFAT-A-GVDVPDSVFYTSAMATADF 78 (250)
T ss_dssp CCCCEEEEECBTTTEETTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHH-T-TCCCCGGGEEEHHHHHHHH
T ss_pred CCccEEEEcCcceEEeCCEeCcCHHHHHHHHHHcCCcEEEEECCCCCCHHHHHHHHHH-c-CCCCCHHHeEcHHHHHHHH
Confidence 7789999999999999864 22344466765332111122333333333322 1 111111 11 1122
Q ss_pred H----hcCCCCCCHHHHHHHHHHcCCcEE---------------------------------EEeCCCHHHHHHHHHHcC
Q 044553 67 L----KRIPIHPRVVPAIKSAHALGCELR---------------------------------IVSDANLFFIETILEHLG 109 (275)
Q Consensus 67 ~----~~~~~~pg~~e~L~~L~~~g~~~~---------------------------------IvS~~~~~~i~~~l~~~g 109 (275)
. ....++|++.++++.|+++|++++ ++||.. ......++.+|
T Consensus 79 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~~-~~~~~~~~~~~ 157 (250)
T 2c4n_A 79 LRRQEGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPD-THGRGFYPACG 157 (250)
T ss_dssp HHTSSCCEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESCCC-SBSSTTCBCHH
T ss_pred HHhcCCCEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCC-CCCCCeeecch
Confidence 2 234577999999999999999998 666654 22222222222
Q ss_pred -CcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCccccc
Q 044553 110 -IRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSL 187 (275)
Q Consensus 110 -l~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~ 187 (275)
+..+|+.+.+.+.. +.+.+|+..++.++..++.. +++|++|||+ .||+.+++
T Consensus 158 ~~~~~~~~~~~~~~~-------------------------~~~kpk~~~~~~~~~~lgi~-~~~~i~iGD~~~nDi~~~~ 211 (250)
T 2c4n_A 158 ALCAGIEKISGRKPF-------------------------YVGKPSPWIIRAALNKMQAH-SEETVIVGDNLRTDILAGF 211 (250)
T ss_dssp HHHHHHHHHHCCCCE-------------------------ECSTTSTHHHHHHHHHHTCC-GGGEEEEESCTTTHHHHHH
T ss_pred HHHHHHHHHhCCCce-------------------------EeCCCCHHHHHHHHHHcCCC-cceEEEECCCchhHHHHHH
Confidence 22233333222211 11233678999999998876 5899999999 79999999
Q ss_pred ccCCCCeEeecCCc
Q 044553 188 KLSEGDHVMPRKNF 201 (275)
Q Consensus 188 ~~~~~~~~~~~~~~ 201 (275)
.+|...+++..+..
T Consensus 212 ~aG~~~~~v~~g~~ 225 (250)
T 2c4n_A 212 QAGLETILVLSGVS 225 (250)
T ss_dssp HTTCEEEEESSSSC
T ss_pred HcCCeEEEECCCCC
Confidence 98886665555433
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.57 E-value=1e-15 Score=125.94 Aligned_cols=78 Identities=18% Similarity=0.255 Sum_probs=66.6
Q ss_pred HHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHH
Q 044553 79 AIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVI 158 (275)
Q Consensus 79 ~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l 158 (275)
+|+.|+++|++++|+||++...++.+++++|+..+|+.+ || |...+
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~~f~~~---------------k~-------------------K~~~l 129 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITHLYQGQ---------------SD-------------------KLVAY 129 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCEEECSC---------------SS-------------------HHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCchhhccc---------------CC-------------------hHHHH
Confidence 899999999999999999999999999999997665432 21 77899
Q ss_pred HHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 159 ERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 159 ~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
+.++.+++.. +++|+||||+.+|+.+++++|.
T Consensus 130 ~~~~~~lg~~-~~~~~~vGDs~nDi~~~~~ag~ 161 (211)
T 3ij5_A 130 HELLATLQCQ-PEQVAYIGDDLIDWPVMAQVGL 161 (211)
T ss_dssp HHHHHHHTCC-GGGEEEEECSGGGHHHHTTSSE
T ss_pred HHHHHHcCcC-cceEEEEcCCHHHHHHHHHCCC
Confidence 9999888765 5899999999999999976553
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.57 E-value=4e-15 Score=119.02 Aligned_cols=166 Identities=10% Similarity=0.055 Sum_probs=97.0
Q ss_pred CCceEEEEEcCCcccCCccH--HHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHH---HHHhcCCCCCC
Q 044553 1 MSGIVVIFDFDKTIIDCDSD--NFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIV---EVLKRIPIHPR 75 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~pg 75 (275)
|++++|+||+||||+|+... ....+.+|.+...... .+......+. . .......+. ......+++||
T Consensus 2 Mm~~~viFD~DGtL~Ds~~~~~~~~~~~~g~~~~~~~~-~g~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~pg 73 (180)
T 3bwv_A 2 MTRQRIAIDMDEVLADTLGAVVKAVNERADLNIKMESL-NGKKLKHMIP----E---HEGLVMDILKEPGFFRNLDVMPH 73 (180)
T ss_dssp -CCCEEEEETBTTTBCHHHHHHHHHHHHSCCCCCGGGC-TTCCC---------------CHHHHHHHSTTGGGSCCBCTT
T ss_pred CcccEEEEeCCCcccccHHHHHHHHHHHhCCCCCHHHH-cCccHHHHCC----c---hHHHHHHHHhCcchhccCCCCcC
Confidence 66789999999999999764 2333456764222222 1222222111 0 000011111 12235789999
Q ss_pred HHHHHHHHHHcCCcEEEEeCC---CH--HHHHHHHHH-cCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCC
Q 044553 76 VVPAIKSAHALGCELRIVSDA---NL--FFIETILEH-LGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCP 149 (275)
Q Consensus 76 ~~e~L~~L~~~g~~~~IvS~~---~~--~~i~~~l~~-~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~ 149 (275)
+.++|+.|++. ++++|+||+ +. ......+.+ ++...+|+.|++++..
T Consensus 74 ~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~~-------------------------- 126 (180)
T 3bwv_A 74 AQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRKN-------------------------- 126 (180)
T ss_dssp HHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCGG--------------------------
T ss_pred HHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCcC--------------------------
Confidence 99999999985 999999998 32 223444555 5666677777765420
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHH
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQ 229 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~ 229 (275)
| .++|+|||||.+++.. ++| ..+++. .+++. .. .+ ...++++.||..
T Consensus 127 ----~---------------l~~~l~ieDs~~~i~~--aaG-~~i~~~-~~~~~------~~-~~---~~~i~~~~el~~ 173 (180)
T 3bwv_A 127 ----I---------------ILADYLIDDNPKQLEI--FEG-KSIMFT-ASHNV------YE-HR---FERVSGWRDVKN 173 (180)
T ss_dssp ----G---------------BCCSEEEESCHHHHHH--CSS-EEEEEC-CGGGT------TC-CS---SEEECSHHHHHH
T ss_pred ----e---------------ecccEEecCCcchHHH--hCC-CeEEeC-CCccc------CC-CC---ceecCCHHHHHH
Confidence 0 0368999999999853 345 444443 33321 11 11 236899999998
Q ss_pred HHHHH
Q 044553 230 ILLHL 234 (275)
Q Consensus 230 ~l~~~ 234 (275)
++.++
T Consensus 174 ~l~~~ 178 (180)
T 3bwv_A 174 YFNSI 178 (180)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 87643
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=99.56 E-value=2.1e-14 Score=121.63 Aligned_cols=145 Identities=15% Similarity=0.260 Sum_probs=94.2
Q ss_pred CceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHHHH
Q 044553 2 SGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAIK 81 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~ 81 (275)
++++|+||+||||+++.+........+.. + ...|..... .....++||+.++|+
T Consensus 58 ~~kavifDlDGTLld~~~~~~~~~~~~~~-----~--~~~~~~~~~-------------------~~~~~~~pg~~e~L~ 111 (258)
T 2i33_A 58 KKPAIVLDLDETVLDNSPHQAMSVKTGKG-----Y--PYKWDDWIN-------------------KAEAEALPGSIDFLK 111 (258)
T ss_dssp SEEEEEECSBTTTEECHHHHHHHHHHSCC-----T--TTTHHHHHH-------------------HCCCEECTTHHHHHH
T ss_pred CCCEEEEeCcccCcCCHHHHHHHHhcccc-----h--HHHHHHHHH-------------------cCCCCcCccHHHHHH
Confidence 36899999999999996542221111110 0 111111111 134678999999999
Q ss_pred HHHHcCCcEEEEeCCC---HHHHHHHHHHcCCc--CCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHH
Q 044553 82 SAHALGCELRIVSDAN---LFFIETILEHLGIR--DCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGV 156 (275)
Q Consensus 82 ~L~~~g~~~~IvS~~~---~~~i~~~l~~~gl~--~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~ 156 (275)
.|+++|++++|+||++ ...+...|+.+|+. .+|+.+++.+.. .|| .
T Consensus 112 ~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~~--------~K~---------------------~ 162 (258)
T 2i33_A 112 YTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPKE--------KGK---------------------E 162 (258)
T ss_dssp HHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTTC--------CSS---------------------H
T ss_pred HHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCCC--------CCc---------------------H
Confidence 9999999999999988 55677888899998 667777664421 122 1
Q ss_pred HHHHHHHhhhcCCCCeEEEEcCCCCCccccc-------c---------cCCCCeEeecCCchhhH
Q 044553 157 VIERIQASLSKEGNKKIIYLGDGSGDYCPSL-------K---------LSEGDHVMPRKNFPLWD 205 (275)
Q Consensus 157 ~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~-------~---------~~~~~~~~~~~~~~~~~ 205 (275)
....+. ..+ ...++||||+.+|+.+|. + +|...+.++...++.|+
T Consensus 163 ~~~~~~-~~~---~~~~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~y~~w~ 223 (258)
T 2i33_A 163 KRRELV-SQT---HDIVLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNPMYGDWE 223 (258)
T ss_dssp HHHHHH-HHH---EEEEEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCCSSSHHH
T ss_pred HHHHHH-HhC---CCceEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCCCcchhh
Confidence 112222 111 346999999999999883 2 57666777666665554
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.56 E-value=9.5e-16 Score=123.98 Aligned_cols=78 Identities=27% Similarity=0.298 Sum_probs=66.9
Q ss_pred HHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHH
Q 044553 79 AIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVI 158 (275)
Q Consensus 79 ~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l 158 (275)
+|+.|+++|++++|+||++...++.+++++|+..+|+.+ + .|+..+
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~~f~~~---------------~-------------------~K~~~~ 99 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEHLFQGR---------------E-------------------DKLVVL 99 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSEEECSC---------------S-------------------CHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHHHhcCc---------------C-------------------ChHHHH
Confidence 899999999999999999999999999999998665533 1 167888
Q ss_pred HHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 159 ERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 159 ~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
+.++..++.. +++|+||||+.+|+.+++.+|.
T Consensus 100 ~~~~~~~g~~-~~~~~~vGD~~nDi~~~~~ag~ 131 (189)
T 3mn1_A 100 DKLLAELQLG-YEQVAYLGDDLPDLPVIRRVGL 131 (189)
T ss_dssp HHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSE
T ss_pred HHHHHHcCCC-hhHEEEECCCHHHHHHHHHCCC
Confidence 9999888765 4899999999999999977654
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.54 E-value=7e-16 Score=123.34 Aligned_cols=77 Identities=14% Similarity=0.145 Sum_probs=64.8
Q ss_pred HHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHH
Q 044553 79 AIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVI 158 (275)
Q Consensus 79 ~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l 158 (275)
+|++|+++|++++|+||+....++.+++++|+. + +.. .|| |...+
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-~----~~~-----------~~~-------------------k~~~l 91 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-V----LHG-----------IDR-------------------KDLAL 91 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-E----EES-----------CSC-------------------HHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-e----EeC-----------CCC-------------------hHHHH
Confidence 899999999999999999999999999999986 3 221 022 77899
Q ss_pred HHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 159 ERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 159 ~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
+.++..++.. +++++||||+.+|+.+++.+|.
T Consensus 92 ~~~~~~~~~~-~~~~~~vGD~~nD~~~~~~ag~ 123 (176)
T 3mmz_A 92 KQWCEEQGIA-PERVLYVGNDVNDLPCFALVGW 123 (176)
T ss_dssp HHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSE
T ss_pred HHHHHHcCCC-HHHEEEEcCCHHHHHHHHHCCC
Confidence 9999888765 4899999999999999977653
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=3.8e-15 Score=117.28 Aligned_cols=78 Identities=19% Similarity=0.216 Sum_probs=66.3
Q ss_pred HHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHH
Q 044553 79 AIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVI 158 (275)
Q Consensus 79 ~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l 158 (275)
+|+.|+++|++++|+||++...++.+++++|+..+|+.+ || |...+
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~~~~~---------------kp-------------------k~~~~ 84 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQGV---------------VD-------------------KLSAA 84 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEEECSC---------------SC-------------------HHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEeeccc---------------CC-------------------hHHHH
Confidence 799999999999999999999999999999987654431 33 66888
Q ss_pred HHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 159 ERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 159 ~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
+.++.+++.. +++|+||||+.+|+.+++.+|.
T Consensus 85 ~~~~~~~~~~-~~~~~~vGD~~~Di~~~~~ag~ 116 (164)
T 3e8m_A 85 EELCNELGIN-LEQVAYIGDDLNDAKLLKRVGI 116 (164)
T ss_dssp HHHHHHHTCC-GGGEEEECCSGGGHHHHTTSSE
T ss_pred HHHHHHcCCC-HHHEEEECCCHHHHHHHHHCCC
Confidence 8998888765 5899999999999999977654
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.53 E-value=6.6e-16 Score=121.42 Aligned_cols=85 Identities=21% Similarity=0.254 Sum_probs=69.6
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCC
Q 044553 73 HPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNM 152 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~ 152 (275)
.|+..++|+.|+++|++++|+||++...++.+++++|+..+|+. .||
T Consensus 38 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~~---------------~kp------------------ 84 (162)
T 2p9j_A 38 NVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEIYTG---------------SYK------------------ 84 (162)
T ss_dssp EHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEEEEC---------------C--------------------
T ss_pred cccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhhccC---------------CCC------------------
Confidence 35567999999999999999999999999999999998765532 243
Q ss_pred chHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCC
Q 044553 153 CKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEG 192 (275)
Q Consensus 153 ~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~ 192 (275)
|...++.++..++.. +++++||||+.+|+.+|+.+|..
T Consensus 85 -~~~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~ag~~ 122 (162)
T 2p9j_A 85 -KLEIYEKIKEKYSLK-DEEIGFIGDDVVDIEVMKKVGFP 122 (162)
T ss_dssp -CHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHHSSEE
T ss_pred -CHHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHCCCe
Confidence 457888888877655 58999999999999999887764
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.53 E-value=6.2e-15 Score=119.78 Aligned_cols=79 Identities=20% Similarity=0.196 Sum_probs=66.0
Q ss_pred HHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHH
Q 044553 78 PAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVV 157 (275)
Q Consensus 78 e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~ 157 (275)
..|+.|+++|++++|+||++...++.+++++|+..+|+.+ || |...
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~~~~~~---------------k~-------------------k~~~ 104 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISLIYQGQ---------------DD-------------------KVQA 104 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCEEECSC---------------SS-------------------HHHH
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcEEeeCC---------------CC-------------------cHHH
Confidence 3589999999999999999999999999999987554321 22 7789
Q ss_pred HHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 158 IERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 158 l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
++.++..++.. +++++||||+.||+.++..+|.
T Consensus 105 ~~~~~~~~~~~-~~~~~~vGD~~nDi~~~~~ag~ 137 (195)
T 3n07_A 105 YYDICQKLAIA-PEQTGYIGDDLIDWPVMEKVAL 137 (195)
T ss_dssp HHHHHHHHCCC-GGGEEEEESSGGGHHHHTTSSE
T ss_pred HHHHHHHhCCC-HHHEEEEcCCHHHHHHHHHCCC
Confidence 99999988765 5899999999999999976553
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=5.4e-15 Score=133.70 Aligned_cols=94 Identities=18% Similarity=0.272 Sum_probs=74.6
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCC------------HHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCC
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDAN------------LFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFT 139 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~------------~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~ 139 (275)
++||+.++|+.|+++|++++|+||.+ ...+..+++.+|+. |+.+++++... ..||.|
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~--fd~i~~~~~~~------~~KP~p--- 156 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVATHAGL------NRKPVS--- 156 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC--CEEEEECSSST------TSTTSS---
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC--EEEEEECCCCC------CCCCCH---
Confidence 79999999999999999999999965 22378889999985 88888876532 457766
Q ss_pred CCCCCCCcCCCCCchHHHHHHHHHhhh---cCCCCeEEEEcCCC-----------------CCcccccccCCC
Q 044553 140 KCSHGCNLCPPNMCKGVVIERIQASLS---KEGNKKIIYLGDGS-----------------GDYCPSLKLSEG 192 (275)
Q Consensus 140 ~~~~~~~~~~~~~~K~~~l~~~~~~~~---~~~~~~~i~vGDs~-----------------~Di~~a~~~~~~ 192 (275)
.++..++..++ ...+++|+||||+. +|+.+|.++|..
T Consensus 157 ----------------~~~~~a~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~ 213 (416)
T 3zvl_A 157 ----------------GMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLP 213 (416)
T ss_dssp ----------------HHHHHHHHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCC
T ss_pred ----------------HHHHHHHHHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCc
Confidence 67777777765 12358999999997 699888887764
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=1.3e-14 Score=116.29 Aligned_cols=83 Identities=17% Similarity=0.149 Sum_probs=68.6
Q ss_pred CCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCc
Q 044553 74 PRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMC 153 (275)
Q Consensus 74 pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~ 153 (275)
+...++|+.|+++|++++|+||++...++.+++++|+..+|+. .||
T Consensus 38 ~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~~~~---------------~k~------------------- 83 (180)
T 1k1e_A 38 VRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFFLG---------------KLE------------------- 83 (180)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEEES---------------CSC-------------------
T ss_pred cchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCceeecC---------------CCC-------------------
Confidence 3445899999999999999999999999999999998765421 122
Q ss_pred hHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 154 KGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 154 K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
|...++.++.+++.. +++++||||+.+|+.++..+|.
T Consensus 84 k~~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~~~~ag~ 120 (180)
T 1k1e_A 84 KETACFDLMKQAGVT-AEQTAYIGDDSVDLPAFAACGT 120 (180)
T ss_dssp HHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSE
T ss_pred cHHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHcCC
Confidence 678888998887765 5899999999999999977664
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.49 E-value=6.3e-13 Score=114.75 Aligned_cols=134 Identities=19% Similarity=0.179 Sum_probs=90.5
Q ss_pred hCCCCHHHHHHHHh--cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceee
Q 044553 55 SQGKTIEDIVEVLK--RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRI 132 (275)
Q Consensus 55 ~~~~~~~~~~~~~~--~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~ 132 (275)
..+...+.+.+.+. .+++.||+.++++.|+++|++++++|++....++.+++++|+......++++...++.++....
T Consensus 123 ~~gl~~~~~~~~v~~~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~ 202 (297)
T 4fe3_A 123 EQGIPKAKLKEIVADSDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKG 202 (297)
T ss_dssp HTTCBGGGHHHHHHTSCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEE
T ss_pred hcCccHHHHHHHHHhcCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEcccceeEe
Confidence 34444444444444 4789999999999999999999999999999999999999987555578888877765554333
Q ss_pred cccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhh-cCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 133 FPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLS-KEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 133 kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~-~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
...+- .+ ..+|.....+...... .....+++|+|||.||+.|++.+..+++.++.+
T Consensus 203 ~~~~~----i~-------~~~k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiG 259 (297)
T 4fe3_A 203 FKGEL----IH-------VFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIG 259 (297)
T ss_dssp ECSSC----CC-------TTCHHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEE
T ss_pred ccccc----cc-------hhhcccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEE
Confidence 22221 01 1123333222211111 112468999999999999987667788877644
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.48 E-value=1.8e-14 Score=116.70 Aligned_cols=78 Identities=19% Similarity=0.324 Sum_probs=65.8
Q ss_pred HHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHH
Q 044553 79 AIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVI 158 (275)
Q Consensus 79 ~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l 158 (275)
.|+.|+++|++++|+||++...++.+++.+|+..+|+.+ || |...+
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~~~~~---------------kp-------------------k~~~~ 99 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHYYKGQ---------------VD-------------------KRSAY 99 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEEECSC---------------SS-------------------CHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccceeCC---------------CC-------------------hHHHH
Confidence 589999999999999999999999999999997654432 33 56888
Q ss_pred HHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 159 ERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 159 ~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
+.++..++.. +++++||||+.+|+.++..+|.
T Consensus 100 ~~~~~~~~~~-~~~~~~vGD~~~Di~~~~~ag~ 131 (191)
T 3n1u_A 100 QHLKKTLGLN-DDEFAYIGDDLPDLPLIQQVGL 131 (191)
T ss_dssp HHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSE
T ss_pred HHHHHHhCCC-HHHEEEECCCHHHHHHHHHCCC
Confidence 8888887765 4899999999999999977664
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=5.8e-15 Score=125.50 Aligned_cols=86 Identities=19% Similarity=0.293 Sum_probs=71.4
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcC
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLC 148 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~ 148 (275)
...++||+.++|+.|+++|++++++||++...++.+++++|+..+|+.++ |.
T Consensus 134 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~---------------p~------------- 185 (263)
T 2yj3_A 134 SDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQEYYSNLS---------------PE------------- 185 (263)
Confidence 35689999999999999999999999999999999999999998887665 11
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
.|..+++.+... +++|+||||+.+|+.+++++|.
T Consensus 186 ----~k~~~~~~l~~~-----~~~~~~VGD~~~D~~aa~~Agv 219 (263)
T 2yj3_A 186 ----DKVRIIEKLKQN-----GNKVLMIGDGVNDAAALALADV 219 (263)
Confidence 144556665543 4799999999999999987764
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.44 E-value=1.7e-15 Score=128.33 Aligned_cols=103 Identities=15% Similarity=0.113 Sum_probs=73.8
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHH--HHH-HHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFF--IET-ILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCN 146 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~--i~~-~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~ 146 (275)
..++|++.++|+.|+ +|+++ |+||+.... ... +++..++..+|+.+++.+.. ..+||.|
T Consensus 125 ~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~------~~~KP~p---------- 186 (264)
T 1yv9_A 125 ELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPV------YIGKPKA---------- 186 (264)
T ss_dssp TCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHTCCCE------ECSTTSH----------
T ss_pred CcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCCcccCCcHHHHHHHHHhCCCcc------ccCCCCH----------
Confidence 457899999999997 89997 899987632 111 12223355667777765432 1346654
Q ss_pred cCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccccccCCCCeEeecCC
Q 044553 147 LCPPNMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSLKLSEGDHVMPRKN 200 (275)
Q Consensus 147 ~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~~~~~~~~~~~~ 200 (275)
.+++.++.+++.. +++|+||||+ .+|+.+|+++|+..+++.++.
T Consensus 187 ---------~~~~~~~~~~~~~-~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~ 231 (264)
T 1yv9_A 187 ---------IIMERAIAHLGVE-KEQVIMVGDNYETDIQSGIQNGIDSLLVTSGF 231 (264)
T ss_dssp ---------HHHHHHHHHHCSC-GGGEEEEESCTTTHHHHHHHHTCEEEEETTSS
T ss_pred ---------HHHHHHHHHcCCC-HHHEEEECCCcHHHHHHHHHcCCcEEEECCCC
Confidence 6788888887765 5899999999 699999999998777666543
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.42 E-value=2e-13 Score=117.22 Aligned_cols=104 Identities=20% Similarity=0.191 Sum_probs=73.5
Q ss_pred CCCCCHHHHHHHHHHc-CCcEEEEeCC---------------------CHHHHHHHHHHcCCcCCcceEecCCCccCCCC
Q 044553 71 PIHPRVVPAIKSAHAL-GCELRIVSDA---------------------NLFFIETILEHLGIRDCFSEINTNPGFVDEEG 128 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~-g~~~~IvS~~---------------------~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g 128 (275)
.+++++.++++.++++ |+++++.|+. ....+...++..|+..+|..+- ....+.++
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~--~~~~~~~~ 199 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCN--PLAGDPED 199 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECC--GGGTCCTT
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEcc--ccccCCCC
Confidence 6778999999999988 9999999987 5567778888888875544321 10000011
Q ss_pred ceeecccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccC
Q 044553 129 RLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLS 190 (275)
Q Consensus 129 ~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~ 190 (275)
...... .+.+.+|...++.++..++.. +++|+|||||.+|+.+++.+|
T Consensus 200 ~~~~~~-------------~~~~~~k~~~~~~~~~~~~~~-~~~~~~~GDs~~D~~~~~~ag 247 (289)
T 3gyg_A 200 SYDVDF-------------IPIGTGKNEIVTFMLEKYNLN-TERAIAFGDSGNDVRMLQTVG 247 (289)
T ss_dssp EEEEEE-------------EESCCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHTTSS
T ss_pred ceEEEE-------------EeCCCCHHHHHHHHHHHcCCC-hhhEEEEcCCHHHHHHHHhCC
Confidence 111111 122345899999999998876 489999999999999997655
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.42 E-value=9.5e-15 Score=123.90 Aligned_cols=130 Identities=13% Similarity=-0.016 Sum_probs=85.6
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHH--HHHHHH-cCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFI--ETILEH-LGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCN 146 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i--~~~l~~-~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~ 146 (275)
..++|++.++++.|+ +|+++ |+||+..... ...+.. .++..+|+.+++.+.. ..+||.|
T Consensus 129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~------~~~KP~~---------- 190 (263)
T 1zjj_A 129 DLTYEKLKYATLAIR-NGATF-IGTNPDATLPGEEGIYPGAGSIIAALKVATNVEPI------IIGKPNE---------- 190 (263)
T ss_dssp TCBHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCE------ECSTTSH----------
T ss_pred CCCHHHHHHHHHHHH-CCCEE-EEECCCccccCCCCCcCCcHHHHHHHHHHhCCCcc------EecCCCH----------
Confidence 456899999999999 89998 9999876443 222222 3455567777665542 2457755
Q ss_pred cCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCC-CCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChH
Q 044553 147 LCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGE 225 (275)
Q Consensus 147 ~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 225 (275)
.+++.++.. .++++++||||+. +|+.+|+++|+..+++.++.....++... ...+ ...++++.
T Consensus 191 ---------~~~~~~~~~---~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~-~~~p---~~~~~~l~ 254 (263)
T 1zjj_A 191 ---------PMYEVVREM---FPGEELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKS-EYKP---DLVLPSVY 254 (263)
T ss_dssp ---------HHHHHHHHH---STTCEEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTC-SSCC---SEEESSGG
T ss_pred ---------HHHHHHHHh---CCcccEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhc-CCCC---CEEECCHH
Confidence 566666665 2468999999995 99999999998777765544333333211 1112 23578888
Q ss_pred HHHHHHHH
Q 044553 226 ELEQILLH 233 (275)
Q Consensus 226 el~~~l~~ 233 (275)
||.++|++
T Consensus 255 el~~~l~~ 262 (263)
T 1zjj_A 255 ELIDYLKT 262 (263)
T ss_dssp GGGGGGC-
T ss_pred HHHHHHhh
Confidence 88776543
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=1.2e-14 Score=123.32 Aligned_cols=130 Identities=12% Similarity=0.006 Sum_probs=79.1
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHH---HHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCc
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIET---ILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNL 147 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~---~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~ 147 (275)
.++|++.++++.| +.|+++ ++||........ .++..++..+|+.+++.+.. ...+||
T Consensus 137 ~~~~~~~~~l~~l-~~~~~~-i~tn~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----~~~~kp------------- 196 (271)
T 1vjr_A 137 LTYERLKKACILL-RKGKFY-IATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPD-----LIAGKP------------- 196 (271)
T ss_dssp CCHHHHHHHHHHH-TTTCEE-EESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCS-----EECSTT-------------
T ss_pred cCHHHHHHHHHHH-HCCCeE-EEECCCccccCCCCccccccHHHHHHHHHhCCCCc-----ccCCCC-------------
Confidence 4567777888887 667777 778765432111 11222333445544433320 012344
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHH
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEE 226 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e 226 (275)
|+.+++.++..++.. +++|++|||+ .+|+.+|+.+|...+++.++......+... ...+ ...++++.|
T Consensus 197 ------k~~~~~~~~~~lgi~-~~e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~~-~~~~---~~~i~~l~e 265 (271)
T 1vjr_A 197 ------NPLVVDVISEKFGVP-KERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERA-ETKP---DFVFKNLGE 265 (271)
T ss_dssp ------STHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHC-SSCC---SEEESSHHH
T ss_pred ------CHHHHHHHHHHhCCC-CceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhhc-CCCC---CEEECCHHH
Confidence 568899999888876 5899999999 599999999998766665443333333221 1112 225789999
Q ss_pred HHHHH
Q 044553 227 LEQIL 231 (275)
Q Consensus 227 l~~~l 231 (275)
|.+++
T Consensus 266 l~~~l 270 (271)
T 1vjr_A 266 LAKAV 270 (271)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98765
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=1.2e-13 Score=111.51 Aligned_cols=78 Identities=19% Similarity=0.252 Sum_probs=65.2
Q ss_pred HHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHH
Q 044553 79 AIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVI 158 (275)
Q Consensus 79 ~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l 158 (275)
+|+.|+++|++++|+||++...++.+++++|+..+|+. .|| |...+
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~~~~---------------~kp-------------------k~~~~ 106 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQG---------------QSN-------------------KLIAF 106 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEEECS---------------CSC-------------------SHHHH
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCceeecC---------------CCC-------------------CHHHH
Confidence 89999999999999999999999999999998754321 133 56888
Q ss_pred HHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 159 ERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 159 ~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
+.++..++.. +++++||||+.+|+.+++.+|.
T Consensus 107 ~~~~~~~g~~-~~~~~~iGD~~~Di~~a~~ag~ 138 (188)
T 2r8e_A 107 SDLLEKLAIA-PENVAYVGDDLIDWPVMEKVGL 138 (188)
T ss_dssp HHHHHHHTCC-GGGEEEEESSGGGHHHHTTSSE
T ss_pred HHHHHHcCCC-HHHEEEECCCHHHHHHHHHCCC
Confidence 8988887765 4899999999999999977665
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=99.39 E-value=9.2e-13 Score=117.60 Aligned_cols=116 Identities=16% Similarity=0.115 Sum_probs=86.8
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCC--cceEecCCCccCCCCceeecccCCCCCCCCCCCcC
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDC--FSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLC 148 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~--fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~ 148 (275)
+++|++.+++++|+++|++++|||++...+++.+.+.+|+.-. -+.|+++...++.+|.+.++-.... + .
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~---p-----~ 292 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDF---P-----I 292 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTS---C-----C
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCcc---c-----e
Confidence 3699999999999999999999999999999999999887432 2578999888878887776532210 0 0
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEe
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVM 196 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~ 196 (275)
..+.+|...++++.... .+...++++|||.+|+.|........+.+
T Consensus 293 ~~~~gK~~~i~~~~~~~--~~~~~i~a~GDs~~D~~ML~~~~~~~~~l 338 (385)
T 4gxt_A 293 SIREGKVQTINKLIKND--RNYGPIMVGGDSDGDFAMLKEFDHTDLSL 338 (385)
T ss_dssp CSTHHHHHHHHHHTCCT--TEECCSEEEECSGGGHHHHHHCTTCSEEE
T ss_pred eCCCchHHHHHHHHHhc--CCCCcEEEEECCHhHHHHHhcCccCceEE
Confidence 12456999999886542 12356899999999998876544444443
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.3e-13 Score=116.10 Aligned_cols=78 Identities=13% Similarity=0.052 Sum_probs=54.2
Q ss_pred CCchHHHHHHHHHhhhcCCCCeEEEEcCCC-CCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHH
Q 044553 151 NMCKGVVIERIQASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQ 229 (275)
Q Consensus 151 ~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~ 229 (275)
+.+|+.+++.++..++.. +++|++|||+. +|+.+++.+|...+.+..+.+...+.... ...+ ...++++.|+.+
T Consensus 189 ~kpk~~~~~~~~~~lgi~-~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~~~~~~-~~~~---~~~~~~~~el~~ 263 (271)
T 2x4d_A 189 GKPSPEFFKSALQAIGVE-AHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHP-EVKA---DGYVDNLAEAVD 263 (271)
T ss_dssp STTCHHHHHHHHHHHTCC-GGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCGGGGGCS-SCCC---SEEESSHHHHHH
T ss_pred cCCCHHHHHHHHHHhCCC-cceEEEECCCcHHHHHHHHHCCCcEEEEcCCCCCchhhccc-CCCC---CEEeCCHHHHHH
Confidence 455889999999998875 58999999998 99999999888655555442322222210 1112 236799999988
Q ss_pred HHHH
Q 044553 230 ILLH 233 (275)
Q Consensus 230 ~l~~ 233 (275)
+|.+
T Consensus 264 ~l~~ 267 (271)
T 2x4d_A 264 LLLQ 267 (271)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7754
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.36 E-value=2.1e-11 Score=101.20 Aligned_cols=127 Identities=14% Similarity=0.086 Sum_probs=80.9
Q ss_pred CCHHHHHHHHH-Hc-CCcE-----------EEEe-CCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCC
Q 044553 74 PRVVPAIKSAH-AL-GCEL-----------RIVS-DANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFT 139 (275)
Q Consensus 74 pg~~e~L~~L~-~~-g~~~-----------~IvS-~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~ 139 (275)
+.+.++++.++ +. |+.+ ++++ +.....++.+++.++ ..|+.+ ++.... ...
T Consensus 84 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~------ei~------ 148 (231)
T 1wr8_A 84 DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELN--LNLVAV-DSGFAI------HVK------ 148 (231)
T ss_dssp SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTT--CSCEEE-ECSSCE------EEE------
T ss_pred HHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCCCHHHHHHHHHhcC--CcEEEE-ecCcEE------EEe------
Confidence 77888888888 55 6654 6666 557778888888865 445555 433211 111
Q ss_pred CCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEe
Q 044553 140 KCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIH 219 (275)
Q Consensus 140 ~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 219 (275)
+.+.+|...++.++..++.. ++++++|||+.||+.++..+|.. +++. ++...+ .+.+. .
T Consensus 149 ---------~~~~~K~~~~~~~~~~~~~~-~~~~~~iGD~~nD~~~~~~ag~~-v~~~---~~~~~~-~~~a~------~ 207 (231)
T 1wr8_A 149 ---------KPWINKGSGIEKASEFLGIK-PKEVAHVGDGENDLDAFKVVGYK-VAVA---QAPKIL-KENAD------Y 207 (231)
T ss_dssp ---------CTTCCHHHHHHHHHHHHTSC-GGGEEEEECSGGGHHHHHHSSEE-EECT---TSCHHH-HTTCS------E
T ss_pred ---------cCCCChHHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHcCCe-EEec---CCCHHH-HhhCC------E
Confidence 12345999999999988765 48999999999999999776653 3322 222233 22221 1
Q ss_pred eCCChHH--HHHHHHHHHH
Q 044553 220 EWTDGEE--LEQILLHLVN 236 (275)
Q Consensus 220 ~~~~~~e--l~~~l~~~~~ 236 (275)
...+..+ +.+.|++++.
T Consensus 208 v~~~~~e~Gv~~~l~~~~~ 226 (231)
T 1wr8_A 208 VTKKEYGEGGAEAIYHILE 226 (231)
T ss_dssp ECSSCHHHHHHHHHHHHHH
T ss_pred EecCCCcchHHHHHHHHHH
Confidence 3556555 7777776654
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=2.1e-14 Score=124.53 Aligned_cols=134 Identities=11% Similarity=0.050 Sum_probs=87.4
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHH--H-HHHHHcC-CcCCcceEecCCCccCCCCceeecccCCCCCCCCCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFI--E-TILEHLG-IRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGC 145 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i--~-~~l~~~g-l~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~ 145 (275)
..++|++.++++.|++.|+ ++++||+..... . ..+...| +..+|+.+++.+.. ..+||.
T Consensus 155 ~~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~------~~~KP~---------- 217 (306)
T 2oyc_A 155 HFSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQAL------VVGKPS---------- 217 (306)
T ss_dssp TCCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCCCE------ECSTTS----------
T ss_pred CCCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCCce------eeCCCC----------
Confidence 3467899999999999898 999999875433 1 2222333 44556666554432 134654
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCC-CCcccccccCCCCeEeecCCchhhHHHh----h-CCCceeEEEe
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRKNFPLWDLII----R-NPMLIKAEIH 219 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~~~~~~~l~~----~-~~~~~~~~~~ 219 (275)
+.+++.++..++.. +++++||||+. +|+.+|+.+|+..+++.++.....++.. . ....+ ..
T Consensus 218 ---------~~~~~~~~~~lgi~-~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~p---d~ 284 (306)
T 2oyc_A 218 ---------PYMFECITENFSID-PARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVP---HY 284 (306)
T ss_dssp ---------THHHHHHHHHSCCC-GGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSC---SE
T ss_pred ---------HHHHHHHHHHcCCC-hHHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCC---CE
Confidence 47888888888765 58999999995 9999999999877666554333333322 0 00112 22
Q ss_pred eCCChHHHHHHHHH
Q 044553 220 EWTDGEELEQILLH 233 (275)
Q Consensus 220 ~~~~~~el~~~l~~ 233 (275)
.++++.||..++++
T Consensus 285 vi~~l~el~~~l~~ 298 (306)
T 2oyc_A 285 YVESIADLTEGLED 298 (306)
T ss_dssp EESSGGGGGGGC--
T ss_pred EECCHHHHHHHHHh
Confidence 57888888766553
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.33 E-value=1.7e-12 Score=109.97 Aligned_cols=79 Identities=11% Similarity=0.047 Sum_probs=55.4
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccccccCCCCeEeecCCchhhHHH---hhCCCceeEEEeeCCChH
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSLKLSEGDHVMPRKNFPLWDLI---IRNPMLIKAEIHEWTDGE 225 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~ 225 (275)
.+++|...++.++..++.. ++++++|||+ .+|+.+|+.+|+..+++..+......+. ......+ ....+++.
T Consensus 185 ~~kp~~~~~~~~~~~~~~~-~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~---d~v~~~~~ 260 (268)
T 3qgm_A 185 VGKPSEVIMREALDILGLD-AKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGLKP---DYVFNSLK 260 (268)
T ss_dssp CSTTSHHHHHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHHTCCC---SEEESSHH
T ss_pred cCCCCHHHHHHHHHHhCCC-chhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccccCCCC---CEEECCHH
Confidence 4567889999999998876 5899999999 6999999999987777765544333322 0111112 23678999
Q ss_pred HHHHHHH
Q 044553 226 ELEQILL 232 (275)
Q Consensus 226 el~~~l~ 232 (275)
||.++|+
T Consensus 261 el~~~l~ 267 (268)
T 3qgm_A 261 DMVEALE 267 (268)
T ss_dssp HHHHTC-
T ss_pred HHHHHHh
Confidence 9987654
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.33 E-value=1.6e-11 Score=105.13 Aligned_cols=77 Identities=9% Similarity=0.046 Sum_probs=52.1
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHH--
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEE-- 226 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e-- 226 (275)
+.+..|...++.++..+++. ++++++|||+.||+.++..+| +.++-.+.. ..+... .. + ...+..+
T Consensus 198 ~~~~~K~~~l~~l~~~lgi~-~~~~i~~GD~~NDi~m~~~ag---~~vam~na~-~~~k~~-Ad-----~-v~~s~~edG 265 (290)
T 3dnp_A 198 PKGVSKEAGLALVASELGLS-MDDVVAIGHQYDDLPMIELAG---LGVAMGNAV-PEIKRK-AD-----W-VTRSNDEQG 265 (290)
T ss_dssp ETTCCHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHHSS---EEEECTTSC-HHHHHH-SS-----E-ECCCTTTTH
T ss_pred ECCCCHHHHHHHHHHHcCCC-HHHEEEECCchhhHHHHHhcC---CEEEecCCc-HHHHHh-cC-----E-ECCCCCccH
Confidence 34566999999999999876 489999999999999996654 444433321 222221 11 2 2355555
Q ss_pred HHHHHHHHHHH
Q 044553 227 LEQILLHLVNT 237 (275)
Q Consensus 227 l~~~l~~~~~~ 237 (275)
+...|++++.+
T Consensus 266 v~~~i~~~~~~ 276 (290)
T 3dnp_A 266 VAYMMKEYFRM 276 (290)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 88888888754
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.32 E-value=1.7e-11 Score=104.36 Aligned_cols=47 Identities=15% Similarity=0.229 Sum_probs=37.8
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
+.+..|+..++.++..+++. ++++++|||+.||+.++..+| +.++-+
T Consensus 193 ~~~~~K~~~l~~l~~~lgi~-~~~~i~~GD~~NDi~m~~~ag---~~vam~ 239 (279)
T 4dw8_A 193 PQGIDKALSLSVLLENIGMT-REEVIAIGDGYNDLSMIKFAG---MGVAMG 239 (279)
T ss_dssp CTTCCHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSS---EEEECT
T ss_pred cCCCChHHHHHHHHHHcCCC-HHHEEEECCChhhHHHHHHcC---cEEEcC
Confidence 44567999999999999876 489999999999999996654 455543
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.32 E-value=7.2e-12 Score=104.02 Aligned_cols=116 Identities=16% Similarity=0.222 Sum_probs=77.0
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCC-CCcee--ecc---------------
Q 044553 73 HPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDE-EGRLR--IFP--------------- 134 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~-~g~~~--~kp--------------- 134 (275)
.|.+.++|++|+++|++++++|+.+...+..+++.+|++.+ .|.++...+-. +|... ..+
T Consensus 24 ~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~--~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~~~ 101 (227)
T 1l6r_A 24 STKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGP--VFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTS 101 (227)
T ss_dssp CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSC--EEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTSS
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCe--EEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHHhc
Confidence 35577899999999999999999999999999999998643 33333332211 22211 000
Q ss_pred ----c------CCC-----------------------CCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCC
Q 044553 135 ----F------HDF-----------------------TKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSG 181 (275)
Q Consensus 135 ----~------~~~-----------------------~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~ 181 (275)
+ .++ ...+...++.+.+..|...++.++..++.. ++++++|||+.|
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~-~~~~~~iGD~~n 180 (227)
T 1l6r_A 102 MRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLE-YDEILVIGDSNN 180 (227)
T ss_dssp CBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCC-GGGEEEECCSGG
T ss_pred CCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcC-HHHEEEECCcHH
Confidence 0 000 000001112356678999999999988765 479999999999
Q ss_pred CcccccccCC
Q 044553 182 DYCPSLKLSE 191 (275)
Q Consensus 182 Di~~a~~~~~ 191 (275)
|+.++..++.
T Consensus 181 D~~m~~~ag~ 190 (227)
T 1l6r_A 181 DMPMFQLPVR 190 (227)
T ss_dssp GHHHHTSSSE
T ss_pred hHHHHHHcCc
Confidence 9999866543
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.30 E-value=3.4e-12 Score=101.04 Aligned_cols=75 Identities=17% Similarity=0.202 Sum_probs=59.8
Q ss_pred HHHHHHHcCCcEEEEeCCCHHHHHHHHH--HcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHH
Q 044553 79 AIKSAHALGCELRIVSDANLFFIETILE--HLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGV 156 (275)
Q Consensus 79 ~L~~L~~~g~~~~IvS~~~~~~i~~~l~--~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~ 156 (275)
.|+.|+++|++++|+||. ..++.+++ .+|+. + +.+. ..|..
T Consensus 44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-~----~~g~------------------------------~~K~~ 86 (168)
T 3ewi_A 44 GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK-T----EVSV------------------------------SDKLA 86 (168)
T ss_dssp HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-E----ECSC------------------------------SCHHH
T ss_pred HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-E----EECC------------------------------CChHH
Confidence 799999999999999999 68888999 55553 2 2110 12779
Q ss_pred HHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 157 VIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 157 ~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
.++.++..++.. +++++||||+.||+.++..+|.
T Consensus 87 ~l~~~~~~~gi~-~~~~~~vGD~~nDi~~~~~ag~ 120 (168)
T 3ewi_A 87 TVDEWRKEMGLC-WKEVAYLGNEVSDEECLKRVGL 120 (168)
T ss_dssp HHHHHHHHTTCC-GGGEEEECCSGGGHHHHHHSSE
T ss_pred HHHHHHHHcCcC-hHHEEEEeCCHhHHHHHHHCCC
Confidence 999999988776 4899999999999999977654
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=99.29 E-value=2.2e-11 Score=102.49 Aligned_cols=125 Identities=14% Similarity=0.121 Sum_probs=84.6
Q ss_pred ceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHH--hcCCCCCCHHHHH
Q 044553 3 GIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVL--KRIPIHPRVVPAI 80 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~pg~~e~L 80 (275)
+.+||||+||||++......-...-+ ...+.+.+..+. ....++||+.++|
T Consensus 58 ~~avVfDIDgTlldn~~y~~~~~~~~---------------------------~~f~~~~w~~wv~~~~~~~~pG~~ell 110 (262)
T 3ocu_A 58 KKAVVADLNETMLDNSPYAGWQVQNN---------------------------KPFDGKDWTRWVDARQSRAVPGAVEFN 110 (262)
T ss_dssp EEEEEECCBTTTEECHHHHHHHHHHT---------------------------CCCCHHHHHHHHHHTCCEECTTHHHHH
T ss_pred CeEEEEECCCcCCCCchhhhhhcccc---------------------------ccCCHHHHHHHHHcCCCCCCccHHHHH
Confidence 56999999999999964321110000 011222222222 3578999999999
Q ss_pred HHHHHcCCcEEEEeCCCH----HHHHHHHHHcCCcCCcc-eEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchH
Q 044553 81 KSAHALGCELRIVSDANL----FFIETILEHLGIRDCFS-EINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKG 155 (275)
Q Consensus 81 ~~L~~~g~~~~IvS~~~~----~~i~~~l~~~gl~~~fd-~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~ 155 (275)
+.|+++|++++|+||.+. ..+...|+++|+..+++ .++.... + ..|.
T Consensus 111 ~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~----------~------------------~~K~ 162 (262)
T 3ocu_A 111 NYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKKD----------K------------------SAKA 162 (262)
T ss_dssp HHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEEESS----------C------------------SCCH
T ss_pred HHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceeccCC----------C------------------CChH
Confidence 999999999999998754 58888999999976653 4443211 1 1156
Q ss_pred HHHHHHHHhhhcCCCCeEEEEcCCCCCcccc
Q 044553 156 VVIERIQASLSKEGNKKIIYLGDGSGDYCPS 186 (275)
Q Consensus 156 ~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a 186 (275)
..++.+... +...++||||..+|+.++
T Consensus 163 ~~r~~l~~~----Gy~iv~~vGD~~~Dl~~~ 189 (262)
T 3ocu_A 163 ARFAEIEKQ----GYEIVLYVGDNLDDFGNT 189 (262)
T ss_dssp HHHHHHHHT----TEEEEEEEESSGGGGCST
T ss_pred HHHHHHHhc----CCCEEEEECCChHHhccc
Confidence 777777654 235699999999999764
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=99.29 E-value=3.3e-11 Score=101.30 Aligned_cols=124 Identities=19% Similarity=0.206 Sum_probs=84.2
Q ss_pred ceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHH--hcCCCCCCHHHHH
Q 044553 3 GIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVL--KRIPIHPRVVPAI 80 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~pg~~e~L 80 (275)
+++||||+||||+++.....-...-+ ...+.+.+.++. ...+++||+.++|
T Consensus 58 ~~avVfDIDgTlldn~~y~~~~~~~~---------------------------~~f~~~~w~~wv~~g~~~~~pg~~ell 110 (260)
T 3pct_A 58 KKAVVVDLDETMIDNSAYAGWQVQSG---------------------------QGFSPKTWTKWVDARQSAAIPGAVEFS 110 (260)
T ss_dssp CEEEEECCBTTTEECHHHHHHHHHHT---------------------------CCCCHHHHHHHHHTTCCEECTTHHHHH
T ss_pred CCEEEEECCccCcCChhHHHhhcccC---------------------------CCCCHHHHHHHHHcCCCCCCccHHHHH
Confidence 45999999999999965321111000 111222222222 3477899999999
Q ss_pred HHHHHcCCcEEEEeCCCH----HHHHHHHHHcCCcCCcc-eEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchH
Q 044553 81 KSAHALGCELRIVSDANL----FFIETILEHLGIRDCFS-EINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKG 155 (275)
Q Consensus 81 ~~L~~~g~~~~IvS~~~~----~~i~~~l~~~gl~~~fd-~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~ 155 (275)
+.|+++|++++|+||.+. ..+...|+++|+..+++ .++.... + ..|.
T Consensus 111 ~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~----------~------------------~~K~ 162 (260)
T 3pct_A 111 NYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLLKKD----------K------------------SNKS 162 (260)
T ss_dssp HHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTTEEEESS----------C------------------SSSH
T ss_pred HHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccceeEecCC----------C------------------CChH
Confidence 999999999999999854 58888999999987664 3442111 1 1156
Q ss_pred HHHHHHHHhhhcCCCCeEEEEcCCCCCccc
Q 044553 156 VVIERIQASLSKEGNKKIIYLGDGSGDYCP 185 (275)
Q Consensus 156 ~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~ 185 (275)
...+.+... +...++||||+.+|+.+
T Consensus 163 ~~r~~L~~~----gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 163 VRFKQVEDM----GYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp HHHHHHHTT----TCEEEEEEESSGGGGCG
T ss_pred HHHHHHHhc----CCCEEEEECCChHHcCc
Confidence 777776652 24679999999999976
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.29 E-value=1.4e-11 Score=104.87 Aligned_cols=41 Identities=17% Similarity=0.211 Sum_probs=33.2
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccC
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLS 190 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~ 190 (275)
+.+..|...++.++..+++. ++++++|||+.||+.++..+|
T Consensus 193 ~~~~~K~~~l~~l~~~lgi~-~~~~i~~GD~~NDi~m~~~ag 233 (279)
T 3mpo_A 193 NRRASKGGTLSELVDQLGLT-ADDVMTLGDQGNDLTMIKYAG 233 (279)
T ss_dssp ESSCCHHHHHHHHHHHTTCC-GGGEEEC--CCTTHHHHHHST
T ss_pred cCCCChHHHHHHHHHHcCCC-HHHEEEECCchhhHHHHHhcC
Confidence 45567999999999999876 489999999999999997655
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.28 E-value=2.9e-11 Score=104.50 Aligned_cols=75 Identities=11% Similarity=0.123 Sum_probs=50.7
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHH--H
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEE--L 227 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e--l 227 (275)
.+..|...++.++..+++. ++++++|||+.||+.++..+| +.++-++. ...+... .. + ...+..+ +
T Consensus 225 ~~~~K~~al~~l~~~lgi~-~~e~i~~GDs~NDi~m~~~ag---~~vam~na-~~~~k~~-Ad-----~-v~~~~~edGv 292 (304)
T 3l7y_A 225 KGLHKGWALQQLLKRWNFT-SDHLMAFGDGGNDIEMLKLAK---YSYAMANA-PKNVKAA-AN-----Y-QAKSNDESGV 292 (304)
T ss_dssp TTCSHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHHCT---EEEECTTS-CHHHHHH-CS-----E-ECCCGGGTHH
T ss_pred CCCCHHHHHHHHHHHhCcC-HHHEEEECCCHHHHHHHHhcC---CeEEcCCc-CHHHHHh-cc-----E-EcCCCCcchH
Confidence 3456999999999999876 489999999999999996654 45543332 2222221 11 1 3455555 7
Q ss_pred HHHHHHHHH
Q 044553 228 EQILLHLVN 236 (275)
Q Consensus 228 ~~~l~~~~~ 236 (275)
...|++++.
T Consensus 293 ~~~l~~~~~ 301 (304)
T 3l7y_A 293 LDVIDNYLA 301 (304)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777777764
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.28 E-value=2.7e-12 Score=108.71 Aligned_cols=73 Identities=8% Similarity=0.059 Sum_probs=49.8
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHH
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEEL 227 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el 227 (275)
.+++|..+++.++..++.. +++++||||+ .+|+.+|+.+|...+++.++......+... ...+ ...++++.||
T Consensus 180 ~~Kp~~~~~~~~~~~~~~~-~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~-~~~p---d~~~~~l~~l 253 (264)
T 3epr_A 180 IGKPNAIIMNKALEILNIP-RNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDL-PIQP---SYVLASLDEW 253 (264)
T ss_dssp CSTTSHHHHHHHHHHHTSC-GGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCGGGGGGC-SSCC---SEEESCGGGC
T ss_pred CCCCCHHHHHHHHHHhCcC-cccEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhc-CCCC---CEEECCHHHH
Confidence 4566778899999998876 5899999999 799999999998766665443333333221 1112 2246777664
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.28 E-value=2.3e-13 Score=116.51 Aligned_cols=100 Identities=12% Similarity=0.050 Sum_probs=74.6
Q ss_pred CHHHHHHHHHHcCCcEEEEeCCCHHHH--H--HHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCC
Q 044553 75 RVVPAIKSAHALGCELRIVSDANLFFI--E--TILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPP 150 (275)
Q Consensus 75 g~~e~L~~L~~~g~~~~IvS~~~~~~i--~--~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~ 150 (275)
...++++.|+++|++ +|+||+..... . .+++..++..+|+.+++.+.. ..+||+|
T Consensus 149 ~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~------~~~KP~p-------------- 207 (284)
T 2hx1_A 149 DLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAIGGVATMIESILGRRFI------RFGKPDS-------------- 207 (284)
T ss_dssp HHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECHHHHHHHHHHHHCSCEE------EESTTSS--------------
T ss_pred cHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccCChHHHHHHHHhCCcee------EecCCCH--------------
Confidence 666777789999999 99999876655 3 123556777888888776543 2568876
Q ss_pred CCchHHHHHHHHHhh----hcCCCCeEEEEcCC-CCCcccccccCCCCeEeecCCc
Q 044553 151 NMCKGVVIERIQASL----SKEGNKKIIYLGDG-SGDYCPSLKLSEGDHVMPRKNF 201 (275)
Q Consensus 151 ~~~K~~~l~~~~~~~----~~~~~~~~i~vGDs-~~Di~~a~~~~~~~~~~~~~~~ 201 (275)
.+++.++..+ +.. +++|+||||+ .+|+.+|+++|+..+++.++..
T Consensus 208 -----~~~~~a~~~l~~~~~~~-~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~ 257 (284)
T 2hx1_A 208 -----QMFMFAYDMLRQKMEIS-KREILMVGDTLHTDILGGNKFGLDTALVLTGNT 257 (284)
T ss_dssp -----HHHHHHHHHHHTTSCCC-GGGEEEEESCTTTHHHHHHHHTCEEEEESSSSS
T ss_pred -----HHHHHHHHHHhhccCCC-cceEEEECCCcHHHHHHHHHcCCeEEEECCCCC
Confidence 5677777776 654 5899999999 4999999999987776665433
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.26 E-value=1.7e-12 Score=109.92 Aligned_cols=78 Identities=10% Similarity=0.137 Sum_probs=51.9
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHH
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELE 228 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~ 228 (275)
.+++|...++.++..++.. ++++++|||+ .+|+.+++.+|...+++.+ |+...+-+.+... .+ ....+++.||.
T Consensus 181 ~~kp~~~~~~~~~~~lgi~-~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~-g~~~~~~~~~~~~--~~-d~v~~~~~el~ 255 (266)
T 3pdw_A 181 IGKPESIIMEQAMRVLGTD-VSETLMVGDNYATDIMAGINAGMDTLLVHT-GVTKREHMTDDME--KP-THAIDSLTEWI 255 (266)
T ss_dssp CSTTSSHHHHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHHTCEEEEECC-C------CCTTSC--CC-SEEESSGGGGH
T ss_pred cCCCCHHHHHHHHHHcCCC-hhhEEEECCCcHHHHHHHHHCCCeEEEECC-CCCChHHHHhcCC--CC-CEEeCCHHHHH
Confidence 4566779999999998876 5899999999 8999999998886555544 3322222211100 12 23578888888
Q ss_pred HHHH
Q 044553 229 QILL 232 (275)
Q Consensus 229 ~~l~ 232 (275)
+-++
T Consensus 256 ~~~~ 259 (266)
T 3pdw_A 256 PYIE 259 (266)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 7654
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=99.23 E-value=1.4e-11 Score=106.37 Aligned_cols=101 Identities=14% Similarity=-0.046 Sum_probs=73.6
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHH---HHHHHHH--------cCCcCCcceEecCCCccCCCCceeecccC
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANLFF---IETILEH--------LGIRDCFSEINTNPGFVDEEGRLRIFPFH 136 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~---i~~~l~~--------~gl~~~fd~i~~~~~~~~~~g~~~~kp~~ 136 (275)
.+..++||+.++|+.|+++|++++|+||++... +...+++ +|+ +|+.+++.+.. ..||+|
T Consensus 185 ~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~-------~~kp~p 255 (301)
T 1ltq_A 185 DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--PLVMQCQREQG-------DTRKDD 255 (301)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--CCSEEEECCTT-------CCSCHH
T ss_pred cccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--CchheeeccCC-------CCcHHH
Confidence 457899999999999999999999999997543 4666777 898 48888876542 235655
Q ss_pred CCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEe
Q 044553 137 DFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVM 196 (275)
Q Consensus 137 ~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~ 196 (275)
..+..++..+...+++.++||||+.+|+.+|+++|...+.+
T Consensus 256 -------------------~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v 296 (301)
T 1ltq_A 256 -------------------VVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQV 296 (301)
T ss_dssp -------------------HHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEEC
T ss_pred -------------------HHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeEEEe
Confidence 33334444433222345799999999999999988765544
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=99.22 E-value=4.1e-11 Score=105.00 Aligned_cols=108 Identities=10% Similarity=0.079 Sum_probs=65.1
Q ss_pred CCceEEEEEcCCcccCCccHHHHHHHhCCChH--------H---HhhcC--CCC-hHHHHHHHHHHHHhCCCCHHHHHHH
Q 044553 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDL--------F---NQLLP--TMP-WNSLMDRMMKELHSQGKTIEDIVEV 66 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~--------~---~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 66 (275)
|++++|+||+||||++++....+.+..+.... . ..... ... ... +..-.......+.......+.
T Consensus 19 ~~~kli~fDlDGTLld~~~~~~l~~~~~~g~~~~~~tGR~~~~~~~~~~~~~~~~~~~-l~~~~~~i~~nGa~i~~~~~~ 97 (332)
T 1y8a_A 19 FQGHMFFTDWEGPWILTDFALELCMAVFNNARFFSNLSEYDDYLAYEVRREGYEAGYT-LKLLTPFLAAAGVKNRDVERI 97 (332)
T ss_dssp -CCCEEEECSBTTTBCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCCTTCCTTTH-HHHHHHHHHHTTCCHHHHHHH
T ss_pred CCceEEEEECcCCCcCccHHHHHHHHHHCCCEEEEEcCCCchhhhhhhhccCeechhh-cCCcCeEEEcCCcEEEECCeE
Confidence 35689999999999999876555444444311 1 11110 110 011 110011111223333222233
Q ss_pred Hhc-CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCC
Q 044553 67 LKR-IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGI 110 (275)
Q Consensus 67 ~~~-~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl 110 (275)
... ..+.|++.++|+.|++ |++++++|+....++....+.+++
T Consensus 98 ~~~~~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~ 141 (332)
T 1y8a_A 98 AELSAKFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGV 141 (332)
T ss_dssp HHHHCCBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTC
T ss_pred eeccCCCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhh
Confidence 444 6789999999999999 999999999887778877777766
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.14 E-value=3.2e-11 Score=97.71 Aligned_cols=91 Identities=13% Similarity=0.082 Sum_probs=69.6
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCP 149 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~ 149 (275)
+.++||+.++|++|++. ++++|+|++...+++.+++.+++..+|+.+++.+.... .| .+ +-
T Consensus 67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~f~~~l~rd~~~~------~k-~~------~l----- 127 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVF------HR-GN------YV----- 127 (195)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSCEEEEECGGGCEE------ET-TE------EE-----
T ss_pred EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCcccEEEEEEccccee------cC-Cc------ee-----
Confidence 56789999999999998 99999999999999999999999999999988765421 11 00 00
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccC
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLS 190 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~ 190 (275)
+.+...+.. +++|++|+|+..++.++.++|
T Consensus 128 ----------K~L~~Lg~~-~~~~vivDDs~~~~~~~~~ng 157 (195)
T 2hhl_A 128 ----------KDLSRLGRE-LSKVIIVDNSPASYIFHPENA 157 (195)
T ss_dssp ----------CCGGGSSSC-GGGEEEEESCGGGGTTCGGGE
T ss_pred ----------eeHhHhCCC-hhHEEEEECCHHHhhhCccCc
Confidence 011122232 589999999999998875543
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=99.09 E-value=8.8e-11 Score=94.03 Aligned_cols=92 Identities=12% Similarity=0.152 Sum_probs=69.7
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCP 149 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~ 149 (275)
+.++||+.++|++|++. ++++|+|++...+++.+++.++...+|+.+++.+......|. ..|
T Consensus 54 v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~~f~~~~~rd~~~~~k~~-~~k---------------- 115 (181)
T 2ght_A 54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFHRGN-YVK---------------- 115 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTCCEEEEECGGGSEEETTE-EEC----------------
T ss_pred EEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCCcEEEEEeccCceecCCc-Eec----------------
Confidence 56799999999999998 999999999999999999999999999988876653211110 001
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
.+...+.. +++|++|||+..++.++...|.
T Consensus 116 -----------~L~~Lg~~-~~~~vivdDs~~~~~~~~~ngi 145 (181)
T 2ght_A 116 -----------DLSRLGRD-LRRVLILDNSPASYVFHPDNAV 145 (181)
T ss_dssp -----------CGGGTCSC-GGGEEEECSCGGGGTTCTTSBC
T ss_pred -----------cHHHhCCC-cceEEEEeCCHHHhccCcCCEe
Confidence 11122232 5899999999999988765443
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.08 E-value=3.6e-10 Score=95.56 Aligned_cols=46 Identities=28% Similarity=0.392 Sum_probs=37.3
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
.+..|...++.++..+++. ++++++||||.||+.++..+| +.++-+
T Consensus 197 ~~~~K~~~l~~l~~~lgi~-~~~~i~~GD~~NDi~m~~~ag---~~vam~ 242 (274)
T 3fzq_A 197 KDFHKGKAIKRLQERLGVT-QKETICFGDGQNDIVMFQASD---VTIAMK 242 (274)
T ss_dssp TTCSHHHHHHHHHHHHTCC-STTEEEECCSGGGHHHHHTCS---EEEEET
T ss_pred CCCCHHHHHHHHHHHcCCC-HHHEEEECCChhHHHHHHhcC---ceEEec
Confidence 4566999999999999876 489999999999999996654 555533
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.07 E-value=3.7e-10 Score=96.60 Aligned_cols=47 Identities=19% Similarity=0.126 Sum_probs=38.4
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
+.+..|...++.++..+++. ++++++|||+.||+.++..+| +.++-+
T Consensus 205 ~~~~~K~~al~~l~~~lgi~-~~~~ia~GD~~NDi~ml~~ag---~~vAm~ 251 (285)
T 3pgv_A 205 AGGVSKGHALEAVAKMLGYT-LSDCIAFGDGMNDAEMLSMAG---KGCIMA 251 (285)
T ss_dssp ETTCSHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHHSS---EEEECT
T ss_pred cCCCChHHHHHHHHHHhCCC-HHHEEEECCcHhhHHHHHhcC---CEEEcc
Confidence 56677999999999998876 489999999999999996654 455543
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.06 E-value=1.4e-10 Score=99.25 Aligned_cols=39 Identities=10% Similarity=0.086 Sum_probs=33.7
Q ss_pred CCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccC
Q 044553 151 NMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLS 190 (275)
Q Consensus 151 ~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~ 190 (275)
+..|...++.++..+++. ++++++|||+.||+.++..+|
T Consensus 209 ~~~K~~~l~~l~~~lgi~-~~e~ia~GD~~NDi~ml~~ag 247 (283)
T 3dao_A 209 GVSKWTALSYLIDRFDLL-PDEVCCFGDNLNDIEMLQNAG 247 (283)
T ss_dssp TCCHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHHSS
T ss_pred CCcHHHHHHHHHHHhCCC-HHHEEEECCCHHHHHHHHhCC
Confidence 355999999999999876 489999999999999996654
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.04 E-value=3.6e-10 Score=95.35 Aligned_cols=148 Identities=11% Similarity=0.065 Sum_probs=84.3
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCH------HHHH-HHHHHcCC-------------cCCcceEecCCCccCCCCce
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANL------FFIE-TILEHLGI-------------RDCFSEINTNPGFVDEEGRL 130 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~------~~i~-~~l~~~gl-------------~~~fd~i~~~~~~~~~~g~~ 130 (275)
...+++.++++.++++|+++.+.|+... ..+. ..++.+++ ..++..++..+.....
T Consensus 85 l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~---- 160 (261)
T 2rbk_A 85 IPQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFITEEEEK---- 160 (261)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEECCCHHHHH----
T ss_pred CCHHHHHHHHHHHHHcCCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCCCccccchhccCceeEEEEEeCHHHHH----
Confidence 3457899999999999999988876532 2222 22233332 2233333332210000
Q ss_pred eecc-cCC---CCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHH
Q 044553 131 RIFP-FHD---FTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDL 206 (275)
Q Consensus 131 ~~kp-~~~---~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l 206 (275)
...+ .+. ..+.++..++.+.+.+|...++.++..++.. ++++++|||+.||+.++..+|. .++-. .+...+
T Consensus 161 ~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~~~-~~~~~~iGD~~nD~~~~~~ag~---~v~~~-n~~~~~ 235 (261)
T 2rbk_A 161 EVLPSIPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIK-LEETMSFGDGGNDISMLRHAAI---GVAMG-QAKEDV 235 (261)
T ss_dssp HHGGGSTTCEEECSSTTCCEEESTTCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSE---EEECT-TSCHHH
T ss_pred HHHHhcCCeEEEEecCCeEEecCCCCChHHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHcCc---eEEec-CccHHH
Confidence 0000 000 0011122333567788999999999998775 4899999999999999977654 33322 222232
Q ss_pred HhhCCCceeEEEeeCCChHH--HHHHHHHH
Q 044553 207 IIRNPMLIKAEIHEWTDGEE--LEQILLHL 234 (275)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~e--l~~~l~~~ 234 (275)
. ... .....+..+ +...|+++
T Consensus 236 ~-~~a------~~v~~~~~~dGv~~~l~~~ 258 (261)
T 2rbk_A 236 K-AAA------DYVTAPIDEDGISKAMKHF 258 (261)
T ss_dssp H-HHS------SEECCCGGGTHHHHHHHHH
T ss_pred H-hhC------CEEeccCchhhHHHHHHHh
Confidence 2 211 124678888 88777654
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.03 E-value=8e-10 Score=92.94 Aligned_cols=115 Identities=15% Similarity=0.104 Sum_probs=68.3
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCH-------HHHHHHHHHcCC------------cCCcceEecCCCccC-----
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANL-------FFIETILEHLGI------------RDCFSEINTNPGFVD----- 125 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~-------~~i~~~l~~~gl------------~~~fd~i~~~~~~~~----- 125 (275)
..+.+.+.++++.++++|+.+.+.|+... ......+...+. ...+..++..+....
T Consensus 81 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 160 (258)
T 2pq0_A 81 PLRREKVRALTEEAHKNGHPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLYYENKDIYQALLFCRAEEEEPYVR 160 (258)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEECSSCEEESSSSCHHHHHHHHHTTCCCCCBCTTGGGGSCCCEEEECSCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhCCCeEEEEeCCcEEEecCCcHHHHHHHHhhcCCccccccchhhccCceEEEEECCHHHHHHHHH
Confidence 34557889999999999999988876541 122333333331 112222332221000
Q ss_pred -CCCceeecccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 126 -EEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 126 -~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
..+....++.+ ...+..+.+..|...++.++..+++. ++++++||||.||+.++..+|.
T Consensus 161 ~~~~~~~~~~~~------~~~ei~~~~~~K~~~l~~l~~~lgi~-~~~~ia~GDs~NDi~ml~~ag~ 220 (258)
T 2pq0_A 161 NYPEFRFVRWHD------VSTDVLPAGGSKAEGIRMMIEKLGID-KKDVYAFGDGLNDIEMLSFVGT 220 (258)
T ss_dssp HCTTEEEEEEET------TEEEEEESSCCHHHHHHHHHHHHTCC-GGGEEEECCSGGGHHHHHHSSE
T ss_pred hCCCeEEEEeCC------ceEEEEECCCChHHHHHHHHHHhCCC-HHHEEEECCcHHhHHHHHhCCc
Confidence 00000001111 11223356678999999999999876 4899999999999999976554
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.02 E-value=1.1e-10 Score=98.67 Aligned_cols=48 Identities=13% Similarity=0.023 Sum_probs=38.8
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
.+.+..|...++.++..+++. ++++++|||+.||+.++..+| +.++-+
T Consensus 189 ~~~~~~K~~~l~~l~~~lgi~-~~~~ia~GD~~NDi~m~~~ag---~~vam~ 236 (268)
T 3r4c_A 189 NVAGTSKATGLSLFADYYRVK-VSEIMACGDGGNDIPMLKAAG---IGVAMG 236 (268)
T ss_dssp EETTCCHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHHSS---EEEECT
T ss_pred eeCCCCHHHHHHHHHHHcCCC-HHHEEEECCcHHhHHHHHhCC---CeEEeC
Confidence 356778999999999999876 489999999999999996654 455433
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=1.5e-10 Score=101.00 Aligned_cols=110 Identities=12% Similarity=0.047 Sum_probs=69.9
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHH----cCCcCCcceEecCCCccCC--------------CCceee
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEH----LGIRDCFSEINTNPGFVDE--------------EGRLRI 132 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~----~gl~~~fd~i~~~~~~~~~--------------~g~~~~ 132 (275)
.++|++.+++++|+++|++++|||++..+.++.+.+. +|+.. +.|++....... +|....
T Consensus 143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~--e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y~~ 220 (327)
T 4as2_A 143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKP--ENVIGVTTLLKNRKTGELTTARKQIAEGKYDP 220 (327)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCG--GGEEEECEEEECTTTCCEECHHHHHHTTCCCG
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCH--HHeEeeeeeeeccccccccccccccccccccc
Confidence 5899999999999999999999999999999999987 56653 367776543321 121111
Q ss_pred cccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccc
Q 044553 133 FPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPS 186 (275)
Q Consensus 133 kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a 186 (275)
...+++...+.....-.-+.+|...|+.++.+ +...++++||| ..|+.|-
T Consensus 221 ~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~----g~~Pi~a~Gns~dgD~~ML 271 (327)
T 4as2_A 221 KANLDLEVTPYLWTPATWMAGKQAAILTYIDR----WKRPILVAGDTPDSDGYML 271 (327)
T ss_dssp GGGTTCEEEEEECSSCSSTHHHHHHHHHHTCS----SCCCSEEEESCHHHHHHHH
T ss_pred cccccccccccccccccccCccHHHHHHHHhh----CCCCeEEecCCCCCCHHHH
Confidence 11111000000000001245699999988743 23458999999 5798655
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.87 E-value=2.8e-09 Score=90.47 Aligned_cols=84 Identities=13% Similarity=0.219 Sum_probs=55.8
Q ss_pred HHcCCcEEEEeCCCHHHHHHHHHHcC--CcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHHHHH
Q 044553 84 HALGCELRIVSDANLFFIETILEHLG--IRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERI 161 (275)
Q Consensus 84 ~~~g~~~~IvS~~~~~~i~~~l~~~g--l~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~ 161 (275)
++.++++.++++.. .+..+++.++ +...|+.+.+..... ... +.+..|...++.+
T Consensus 143 ~~~~~ki~i~~~~~--~~~~~~~~l~~~~~~~~~~~~s~~~~~------ei~---------------~~~~~K~~~~~~l 199 (271)
T 1rlm_A 143 DDVLFKFSLNLPDE--QIPLVIDKLHVALDGIMKPVTSGFGFI------DLI---------------IPGLHKANGISRL 199 (271)
T ss_dssp CSCEEEEEEECCGG--GHHHHHHHHHHHTTTSSEEEECSTTEE------EEE---------------CTTCSHHHHHHHH
T ss_pred CCceEEEEEEcCHH--HHHHHHHHHHHHcCCcEEEEeccCCeE------EEE---------------cCCCChHHHHHHH
Confidence 34567788877653 3555555544 445566555443211 111 2234599999999
Q ss_pred HHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 162 QASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 162 ~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
+..++.. ++++++|||+.||+.++..+|.
T Consensus 200 ~~~l~i~-~~~~~~~GD~~nD~~m~~~ag~ 228 (271)
T 1rlm_A 200 LKRWDLS-PQNVVAIGDSGNDAEMLKMARY 228 (271)
T ss_dssp HHHHTCC-GGGEEEEECSGGGHHHHHHCSE
T ss_pred HHHhCCC-HHHEEEECCcHHHHHHHHHcCC
Confidence 9998876 4899999999999999976554
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=1.8e-08 Score=84.74 Aligned_cols=40 Identities=20% Similarity=0.191 Sum_probs=33.6
Q ss_pred CCCCchHHHHHHHHHhhhcCCC--CeEEEEcCCCCCcccccccC
Q 044553 149 PPNMCKGVVIERIQASLSKEGN--KKIIYLGDGSGDYCPSLKLS 190 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~--~~~i~vGDs~~Di~~a~~~~ 190 (275)
+. ..|...++.++..++.. + +++++||||.||+.++..+|
T Consensus 173 ~~-~~K~~~l~~l~~~~~i~-~~~~~~~~~GD~~nD~~m~~~ag 214 (259)
T 3zx4_A 173 KG-ADKGRAVARLRALWPDP-EEARFAVGLGDSLNDLPLFRAVD 214 (259)
T ss_dssp SS-CCHHHHHHHHHHTCSSH-HHHTSEEEEESSGGGHHHHHTSS
T ss_pred CC-CCHHHHHHHHHHHhCCC-CCCceEEEEeCCHHHHHHHHhCC
Confidence 44 77999999999988764 4 79999999999999996644
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=8.9e-08 Score=79.94 Aligned_cols=43 Identities=23% Similarity=0.253 Sum_probs=36.5
Q ss_pred cCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccC
Q 044553 147 LCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLS 190 (275)
Q Consensus 147 ~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~ 190 (275)
+.+.+.+|...++.++..++.. ++++++|||+.||+.+...++
T Consensus 156 i~~~~~~K~~~l~~l~~~~~~~-~~~~~~~GD~~nD~~m~~~~g 198 (244)
T 1s2o_A 156 LLPQRSNKGNATQYLQQHLAME-PSQTLVCGDSGNDIGLFETSA 198 (244)
T ss_dssp EEETTCSHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHTSSS
T ss_pred eccCCCChHHHHHHHHHHhCCC-HHHEEEECCchhhHHHHhccC
Confidence 3567888999999999988765 489999999999999986544
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=98.58 E-value=1.5e-07 Score=71.73 Aligned_cols=40 Identities=15% Similarity=-0.073 Sum_probs=32.5
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCH---HHHHHHHHHcCCc
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANL---FFIETILEHLGIR 111 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~---~~i~~~l~~~gl~ 111 (275)
+.|++.++|+.|+++|+.++|+|+.+. ..+...++.+|+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 457999999999999999999999873 4455666677774
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.43 E-value=3.6e-07 Score=77.78 Aligned_cols=42 Identities=17% Similarity=0.211 Sum_probs=35.7
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
+.+.+|...++.++..++.. ++++++|||+.||+.++..+|.
T Consensus 194 ~~~~~K~~~l~~l~~~~~~~-~~~~~~~GD~~nD~~m~~~ag~ 235 (282)
T 1rkq_A 194 DKRVNKGTGVKSLADVLGIK-PEEIMAIGDQENDIAMIEYAGV 235 (282)
T ss_dssp ETTCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSSE
T ss_pred CCCCCCHHHHHHHHHHhCCC-HHHEEEECCcHHHHHHHHHCCc
Confidence 56678999999999988765 4899999999999999976554
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=98.39 E-value=9.7e-07 Score=80.85 Aligned_cols=125 Identities=15% Similarity=0.165 Sum_probs=75.2
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHc-C-------------CcCCcceEecCCCcc--CCCCceeec
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHL-G-------------IRDCFSEINTNPGFV--DEEGRLRIF 133 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~-g-------------l~~~fd~i~~~~~~~--~~~g~~~~k 133 (275)
+...|++..+|+.|++.| ++.|+||+...++..+++.+ | +.++||.|++..... -.++..-..
T Consensus 245 v~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A~KP~FF~~~~pfr~ 323 (555)
T 2jc9_A 245 VVKDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLFFGEGTVLRQ 323 (555)
T ss_dssp BCCCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESCCTTGGGTTCCCEEE
T ss_pred cCCChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeCCCCCcccCCCcceE
Confidence 667899999999999999 99999999999999999987 7 456799866543210 010100000
Q ss_pred ccCCC-----CCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCccccc-ccCCCCeEeec
Q 044553 134 PFHDF-----TKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSL-KLSEGDHVMPR 198 (275)
Q Consensus 134 p~~~~-----~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~-~~~~~~~~~~~ 198 (275)
-+++. ......... ++....--+..+...++..+ ++++||||. .+||..++ .+||..+.+..
T Consensus 324 Vd~~tg~l~~~~~~~~l~~--g~vY~gGn~~~~~~llg~~g-~eVLYVGDhIftDIl~~kk~~GWrTiLViP 392 (555)
T 2jc9_A 324 VDTKTGKLKIGTYTGPLQH--GIVYSGGSSDTICDLLGAKG-KDILYIGDHIFGDILKSKKRQGWRTFLVIP 392 (555)
T ss_dssp EETTTTEECSSCCCSCCCT--TCCEEECCHHHHHHHHTCCG-GGEEEEESCCCCCCHHHHHHHCCEEEEECT
T ss_pred eecCCCccccccccccccC--CceeccCCHHHHHHHhCCCC-CeEEEECCEehHhHHhHHhhcCeEEEEEEe
Confidence 00000 000000000 00000001233444444443 799999999 78998885 78998887764
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.32 E-value=2.2e-06 Score=72.69 Aligned_cols=39 Identities=10% Similarity=0.135 Sum_probs=35.2
Q ss_pred CCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcC
Q 044553 74 PRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRD 112 (275)
Q Consensus 74 pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~ 112 (275)
+...++|+.|+++|++++++|+.+...+..+++.++++.
T Consensus 29 ~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 67 (275)
T 1xvi_A 29 QPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG 67 (275)
T ss_dssp CTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC
Confidence 556799999999999999999999999999999998864
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.30 E-value=1.4e-06 Score=82.66 Aligned_cols=87 Identities=18% Similarity=0.316 Sum_probs=69.7
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCP 149 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~ 149 (275)
-++.|++.++|+.|+++|++++++|+.....++.+.+.+|++.+ ++. ..|.
T Consensus 456 D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~----~~~-----------~~P~-------------- 506 (645)
T 3j08_A 456 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLV----IAE-----------VLPH-------------- 506 (645)
T ss_dssp CCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEE----ECS-----------CCTT--------------
T ss_pred CCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEE----EEe-----------CCHH--------------
Confidence 46889999999999999999999999999999999999998633 221 1121
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEee
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMP 197 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~ 197 (275)
.|..+++.+... ++++||||+.||+.+.+.+ ++.++
T Consensus 507 ---~K~~~v~~l~~~------~~v~~vGDg~ND~~al~~A---~vgia 542 (645)
T 3j08_A 507 ---QKSEEVKKLQAK------EVVAFVGDGINDAPALAQA---DLGIA 542 (645)
T ss_dssp ---CHHHHHHHHTTT------CCEEEEECSSSCHHHHHHS---SEEEE
T ss_pred ---hHHHHHHHHhhC------CeEEEEeCCHhHHHHHHhC---CEEEE
Confidence 288999988653 5899999999999888654 44544
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.28 E-value=7.3e-06 Score=69.78 Aligned_cols=39 Identities=26% Similarity=0.351 Sum_probs=33.7
Q ss_pred CCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcC
Q 044553 74 PRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRD 112 (275)
Q Consensus 74 pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~ 112 (275)
+...++|+.|+++|++++++|+.+...+..+++.++++.
T Consensus 24 ~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 62 (288)
T 1nrw_A 24 LENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKT 62 (288)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCCC
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 455688899999999999999999999999998888753
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.22 E-value=1.5e-06 Score=74.88 Aligned_cols=42 Identities=14% Similarity=0.117 Sum_probs=35.6
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
+.+.+|..+++.++..++.. ++++++|||+.||+.++..+|.
T Consensus 220 ~~~~~K~~~l~~l~~~~~~~-~~~~~~~GD~~nD~~m~~~ag~ 261 (301)
T 2b30_A 220 KLGHDKYTGINYLLKHYNIS-NDQVLVVGDAENDIAMLSNFKY 261 (301)
T ss_dssp ETTCCHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHSCSE
T ss_pred CCCCCcHHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHcCC
Confidence 56778999999999988765 4899999999999999866544
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=1.3e-06 Score=72.93 Aligned_cols=52 Identities=19% Similarity=0.206 Sum_probs=42.3
Q ss_pred CCceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHHH
Q 044553 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAI 80 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L 80 (275)
|++|+|+||+||||++++. .+.+.+.++|
T Consensus 2 M~~kli~~DlDGTLl~~~~---------------------------------------------------~i~~~~~~~l 30 (246)
T 3f9r_A 2 MKRVLLLFDVDGTLTPPRL---------------------------------------------------CQTDEMRALI 30 (246)
T ss_dssp CCSEEEEECSBTTTBSTTS---------------------------------------------------CCCHHHHHHH
T ss_pred CCceEEEEeCcCCcCCCCC---------------------------------------------------ccCHHHHHHH
Confidence 7789999999999998742 1235566889
Q ss_pred HHHHHcCCcEEEEeCCCHHHHHH
Q 044553 81 KSAHALGCELRIVSDANLFFIET 103 (275)
Q Consensus 81 ~~L~~~g~~~~IvS~~~~~~i~~ 103 (275)
++|+++|++++++|+++...+..
T Consensus 31 ~~l~~~g~~~~iaTGR~~~~~~~ 53 (246)
T 3f9r_A 31 KRARGAGFCVGTVGGSDFAKQVE 53 (246)
T ss_dssp HHHHHTTCEEEEECSSCHHHHHH
T ss_pred HHHHHCCCEEEEECCCCHHHHHH
Confidence 99999999999999998775443
|
| >3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} | Back alignment and structure |
|---|
Probab=98.15 E-value=2.2e-06 Score=69.38 Aligned_cols=52 Identities=13% Similarity=0.023 Sum_probs=45.5
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc-CCcceEecCCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR-DCFSEINTNPG 122 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~-~~fd~i~~~~~ 122 (275)
+...||+.++|+.+. ++|.++|.|++...+++.+++.++.. .+|+..+..+.
T Consensus 58 v~~RPgl~eFL~~l~-~~yeivI~Tas~~~ya~~vl~~LDp~~~~f~~rl~R~~ 110 (204)
T 3qle_A 58 TAKRPGADYFLGYLS-QYYEIVLFSSNYMMYSDKIAEKLDPIHAFVSYNLFKEH 110 (204)
T ss_dssp EEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHHHHTSTTCSSEEEEECGGG
T ss_pred EEeCCCHHHHHHHHH-hCCEEEEEcCCcHHHHHHHHHHhCCCCCeEEEEEEecc
Confidence 567899999999998 67999999999999999999999987 48887766554
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=4e-06 Score=73.76 Aligned_cols=49 Identities=8% Similarity=-0.029 Sum_probs=36.6
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCC---HHHHHHHHH-HcCCcCCcceEecC
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDAN---LFFIETILE-HLGIRDCFSEINTN 120 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~---~~~i~~~l~-~~gl~~~fd~i~~~ 120 (275)
+.||+.++|+.|++.|++++++||++ .......+. .+|+.--.+.|+++
T Consensus 30 ~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~~i~ts 82 (352)
T 3kc2_A 30 PIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPLQIIQS 82 (352)
T ss_dssp ECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGGGEECT
T ss_pred eCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChhhEeeh
Confidence 46999999999999999999999975 233344444 68986555566643
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=98.13 E-value=1e-05 Score=80.53 Aligned_cols=141 Identities=13% Similarity=0.061 Sum_probs=84.7
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcc----eEecCCCccCCCCceeecccC--CCCCCCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFS----EINTNPGFVDEEGRLRIFPFH--DFTKCSH 143 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd----~i~~~~~~~~~~g~~~~kp~~--~~~~~~~ 143 (275)
-++.|++.++|+.|++.|+++.++|+.....+..+.+.+|+..... .+++++... ..++.. .......
T Consensus 602 D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~------~l~~~~~~~~~~~~~ 675 (995)
T 3ar4_A 602 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFD------DLPLAEQREACRRAC 675 (995)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHH------TSCHHHHHHHHHHCC
T ss_pred CCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcccceEEEchhhh------hCCHHHHHHHHhhCc
Confidence 4688999999999999999999999999999999999999965422 122221100 000000 0000000
Q ss_pred CCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeec-CCchhhHHHhhCCCceeEEEeeCC
Q 044553 144 GCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPR-KNFPLWDLIIRNPMLIKAEIHEWT 222 (275)
Q Consensus 144 ~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~ 222 (275)
-+..+ ....|.++++.+... + +.+.|+|||.||+.+.+. +++.++- .+. +...+.... +..-+
T Consensus 676 v~~r~-~P~~K~~~v~~l~~~----g-~~v~~~GDG~ND~~alk~---Advgiamg~g~---~~ak~aAd~----vl~~~ 739 (995)
T 3ar4_A 676 CFARV-EPSHKSKIVEYLQSY----D-EITAMTGDGVNDAPALKK---AEIGIAMGSGT---AVAKTASEM----VLADD 739 (995)
T ss_dssp EEESC-CSSHHHHHHHHHHTT----T-CCEEEEECSGGGHHHHHH---STEEEEETTSC---HHHHHTCSE----EETTC
T ss_pred EEEEe-CHHHHHHHHHHHHHC----C-CEEEEEcCCchhHHHHHH---CCeEEEeCCCC---HHHHHhCCE----EECCC
Confidence 00000 112499999998865 2 689999999999988755 4555443 233 222222211 22235
Q ss_pred ChHHHHHHHH
Q 044553 223 DGEELEQILL 232 (275)
Q Consensus 223 ~~~el~~~l~ 232 (275)
++..+...++
T Consensus 740 ~~~~i~~~i~ 749 (995)
T 3ar4_A 740 NFSTIVAAVE 749 (995)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 6777776653
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=98.12 E-value=1.1e-05 Score=60.23 Aligned_cols=29 Identities=24% Similarity=0.411 Sum_probs=25.4
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCH
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANL 98 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~ 98 (275)
..+.|++.++|+.|+++|++++++||.+.
T Consensus 23 ~~~~~~~~~~l~~l~~~Gi~~~iaTGR~~ 51 (126)
T 1xpj_A 23 VLPRLDVIEQLREYHQLGFEIVISTARNM 51 (126)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECTTT
T ss_pred CCCCHHHHHHHHHHHhCCCeEEEEeCCCh
Confidence 45678899999999999999999999864
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.11 E-value=5.6e-06 Score=79.63 Aligned_cols=88 Identities=18% Similarity=0.300 Sum_probs=70.0
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCP 149 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~ 149 (275)
-++.|++.+.++.|+++|++++++|+.....++.+.+.+|++. +++.- .|
T Consensus 534 D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~----~~~~~-----------~P--------------- 583 (723)
T 3j09_A 534 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL----VIAEV-----------LP--------------- 583 (723)
T ss_dssp CCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE----EECSC-----------CT---------------
T ss_pred CCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcE----EEccC-----------CH---------------
Confidence 4688999999999999999999999999999999999999863 33211 12
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeec
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPR 198 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~ 198 (275)
..|..+++.+... +.++||||+.||+.+.+. +++.++-
T Consensus 584 --~~K~~~v~~l~~~------~~v~~vGDg~ND~~al~~---A~vgiam 621 (723)
T 3j09_A 584 --HQKSEEVKKLQAK------EVVAFVGDGINDAPALAQ---ADLGIAV 621 (723)
T ss_dssp --TCHHHHHHHHTTT------CCEEEEECSSTTHHHHHH---SSEEEEC
T ss_pred --HHHHHHHHHHhcC------CeEEEEECChhhHHHHhh---CCEEEEe
Confidence 1288999988653 589999999999988755 4455543
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=98.10 E-value=4e-06 Score=80.55 Aligned_cols=89 Identities=20% Similarity=0.277 Sum_probs=70.8
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCP 149 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~ 149 (275)
-++.|++.+.|+.|+++|++++++|+.....++.+.+.+|++. +++. ..|.
T Consensus 553 D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~----v~a~-----------~~P~-------------- 603 (736)
T 3rfu_A 553 DPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKK----VVAE-----------IMPE-------------- 603 (736)
T ss_dssp CCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCC----EECS-----------CCHH--------------
T ss_pred ccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCE----EEEe-----------cCHH--------------
Confidence 4688999999999999999999999999999999999999864 3221 1221
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeec
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPR 198 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~ 198 (275)
.|.++++.+..+ ...+.||||+.||..+... +++.++-
T Consensus 604 ---~K~~~v~~l~~~-----g~~V~~vGDG~ND~paL~~---AdvGIAm 641 (736)
T 3rfu_A 604 ---DKSRIVSELKDK-----GLIVAMAGDGVNDAPALAK---ADIGIAM 641 (736)
T ss_dssp ---HHHHHHHHHHHH-----SCCEEEEECSSTTHHHHHH---SSEEEEE
T ss_pred ---HHHHHHHHHHhc-----CCEEEEEECChHhHHHHHh---CCEEEEe
Confidence 288999998875 3689999999999987754 4455543
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.08 E-value=3.2e-05 Score=65.10 Aligned_cols=38 Identities=13% Similarity=0.041 Sum_probs=33.2
Q ss_pred CCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcC
Q 044553 74 PRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRD 112 (275)
Q Consensus 74 pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~ 112 (275)
+...++|+. +++|++++++|+.+...+..+++.+|++.
T Consensus 22 ~~~~~al~~-~~~Gi~v~iaTGR~~~~~~~~~~~l~~~~ 59 (268)
T 1nf2_A 22 EKDRRNIEK-LSRKCYVVFASGRMLVSTLNVEKKYFKRT 59 (268)
T ss_dssp HHHHHHHHH-HTTTSEEEEECSSCHHHHHHHHHHHSSSC
T ss_pred HHHHHHHHH-HhCCCEEEEECCCChHHHHHHHHHhCCCC
Confidence 445688888 88999999999999999999999998864
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=97.97 E-value=1.6e-05 Score=66.23 Aligned_cols=37 Identities=19% Similarity=0.188 Sum_probs=33.5
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcC
Q 044553 76 VVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRD 112 (275)
Q Consensus 76 ~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~ 112 (275)
+.++|+.|+++|++++|+|+.+...+..+++.+|+..
T Consensus 22 ~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~~ 58 (249)
T 2zos_A 22 AKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58 (249)
T ss_dssp GHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCc
Confidence 6689999999999999999999999999999998864
|
| >3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=97.95 E-value=1.2e-05 Score=70.97 Aligned_cols=52 Identities=12% Similarity=0.162 Sum_probs=45.4
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcC-Ccc-eEecCC
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRD-CFS-EINTNP 121 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~-~fd-~i~~~~ 121 (275)
.+...||+.+||+.+. .+|.++|.|++...++..+++.++... +|+ .+++.+
T Consensus 73 ~v~~RPg~~eFL~~l~-~~yeivI~Tas~~~yA~~vl~~LDp~~~~f~~ri~sr~ 126 (372)
T 3ef0_A 73 YIKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRD 126 (372)
T ss_dssp EEEECTTHHHHHHHHH-TTEEEEEECSSCHHHHHHHHHHHCTTSCSSSSCEECTT
T ss_pred EEEECcCHHHHHHHHh-cCcEEEEEeCCcHHHHHHHHHHhccCCceeeeEEEEec
Confidence 3677899999999999 679999999999999999999999887 787 676544
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=97.77 E-value=6.2e-05 Score=73.95 Aligned_cols=112 Identities=17% Similarity=0.158 Sum_probs=72.6
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCc-c---eEecCCCccCCCCceeecccCCCCCCCCCCC
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCF-S---EINTNPGFVDEEGRLRIFPFHDFTKCSHGCN 146 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~f-d---~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~ 146 (275)
++.|++.++++.|++.|+++.++|+.....+..+.+++|+.... + .+++++... +..++...-....
T Consensus 535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~~~~---------~~~el~~~~~~~~ 605 (920)
T 1mhs_A 535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGGDM---------PGSEVYDFVEAAD 605 (920)
T ss_dssp CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBCCCG---------GGGGGGTTTTTTS
T ss_pred cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCcccC---------CHHHHHHHHhhCe
Confidence 58899999999999999999999999999999999999996321 1 011111000 0000000000000
Q ss_pred c-C-CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 147 L-C-PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 147 ~-~-~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
. + .....|.++++.+... + ..+.|+|||.||..+-+. +++.++-+
T Consensus 606 V~arv~P~~K~~iV~~Lq~~----g-~~Vam~GDGvNDapaLk~---AdvGIAmg 652 (920)
T 1mhs_A 606 GFAEVFPQHKYNVVEILQQR----G-YLVAMTGDGVNDAPSLKK---ADTGIAVE 652 (920)
T ss_dssp CEESCCSTHHHHHHHHHHTT----T-CCCEECCCCGGGHHHHHH---SSEEEEET
T ss_pred EEEEeCHHHHHHHHHHHHhC----C-CeEEEEcCCcccHHHHHh---CCcCcccc
Confidence 1 0 0123599999999764 2 589999999999987754 45555543
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00011 Score=73.21 Aligned_cols=41 Identities=20% Similarity=0.297 Sum_probs=38.9
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
++.|++.++|+.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 599 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~ 639 (1028)
T 2zxe_A 599 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGII 639 (1028)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSS
T ss_pred CCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCC
Confidence 57899999999999999999999999999999999999986
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=97.64 E-value=7.2e-05 Score=62.00 Aligned_cols=55 Identities=16% Similarity=0.232 Sum_probs=40.0
Q ss_pred CCceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHHH
Q 044553 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAI 80 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L 80 (275)
|++|+|+||+||||++.+. .+.+...++|
T Consensus 4 ~~~kli~~DlDGTLl~~~~---------------------------------------------------~i~~~~~~al 32 (246)
T 2amy_A 4 PGPALCLFDVDGTLTAPRQ---------------------------------------------------KITKEMDDFL 32 (246)
T ss_dssp CCSEEEEEESBTTTBCTTS---------------------------------------------------CCCHHHHHHH
T ss_pred CCceEEEEECCCCcCCCCc---------------------------------------------------ccCHHHHHHH
Confidence 6689999999999998732 1234566888
Q ss_pred HHHHHcCCcEEEEeCCCHHHHHHHHHHcCC
Q 044553 81 KSAHALGCELRIVSDANLFFIETILEHLGI 110 (275)
Q Consensus 81 ~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl 110 (275)
+.|+++ ++++|+|+.+... +.+.+++
T Consensus 33 ~~l~~~-i~v~iaTGR~~~~---~~~~l~~ 58 (246)
T 2amy_A 33 QKLRQK-IKIGVVGGSDFEK---VQEQLGN 58 (246)
T ss_dssp HHHTTT-SEEEEECSSCHHH---HHHHHCT
T ss_pred HHHHhC-CeEEEEcCCCHHH---HHHHhcc
Confidence 888888 8899999887543 3445553
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00039 Score=69.48 Aligned_cols=42 Identities=19% Similarity=0.245 Sum_probs=39.2
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
-++.|++.++|+.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 603 Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~ 644 (1034)
T 3ixz_A 603 DPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGII 644 (1034)
T ss_pred CCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 368899999999999999999999999999999999999985
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.51 E-value=4.2e-05 Score=74.98 Aligned_cols=110 Identities=18% Similarity=0.226 Sum_probs=67.8
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCC-c-ceEecCCCccCCCCceeecccCCCCCCCCCCCcC
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDC-F-SEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLC 148 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~-f-d~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~ 148 (275)
++.|++.++++.|++.|+++.++|+.....+..+.+++|+... + +.++.+.. .+. .....+..+......-...+
T Consensus 488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~-~~~--~~~~~~l~~~~~~~~v~arv 564 (885)
T 3b8c_A 488 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTH-KDA--NLASIPVEELIEKADGFAGV 564 (885)
T ss_dssp CCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGG-GGT--TSCCSCHHHHHHTSCCEECC
T ss_pred ccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccc-ccc--ccchhHHHHHHhhCcEEEEE
Confidence 5789999999999999999999999999999999999999531 1 11111110 000 00000000000000000000
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCccccccc
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKL 189 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~ 189 (275)
....|.++++.+... + +.+.|+|||.||..+-+.+
T Consensus 565 -~P~~K~~iV~~lq~~----g-~~Vam~GDGvNDapaLk~A 599 (885)
T 3b8c_A 565 -FPEHKYEIVKKLQER----K-HIVGMTGDGVNDAPALKKA 599 (885)
T ss_dssp -CHHHHHHHHHHHHHT----T-CCCCBCCCSSTTHHHHHHS
T ss_pred -CHHHHHHHHHHHHHC----C-CeEEEEcCCchhHHHHHhC
Confidence 012499999999864 2 5799999999999777553
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=97.46 E-value=8.8e-05 Score=61.35 Aligned_cols=73 Identities=15% Similarity=0.129 Sum_probs=47.0
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCC---h
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTD---G 224 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~ 224 (275)
.+.+..|..+++.++..++ ++++||+.||+.+-..+.. ++.++-++. + + .+++ ...+ -
T Consensus 155 ~~~~~~Kg~al~~l~~~~g------via~GD~~ND~~Ml~~a~~-g~~vam~Na---~---~-----~A~~-v~~~~~~~ 215 (239)
T 1u02_A 155 RVPGVNKGSAIRSVRGERP------AIIAGDDATDEAAFEANDD-ALTIKVGEG---E---T-----HAKF-HVADYIEM 215 (239)
T ss_dssp ECTTCCHHHHHHHHHTTSC------EEEEESSHHHHHHHHTTTT-SEEEEESSS---C---C-----CCSE-EESSHHHH
T ss_pred EcCCCCHHHHHHHHHhhCC------eEEEeCCCccHHHHHHhhC-CcEEEECCC---C---C-----cceE-EeCCCCCH
Confidence 4677889999999988752 9999999999988854310 455544432 0 1 1111 2344 5
Q ss_pred HHHHHHHHHHHHHhc
Q 044553 225 EELEQILLHLVNTIG 239 (275)
Q Consensus 225 ~el~~~l~~~~~~~~ 239 (275)
..+.++|++++....
T Consensus 216 ~gV~~~l~~~~~~~~ 230 (239)
T 1u02_A 216 RKILKFIEMLGVQKK 230 (239)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcc
Confidence 667788887775443
|
| >4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00021 Score=64.67 Aligned_cols=118 Identities=15% Similarity=0.153 Sum_probs=75.1
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHH-c--------CCcCCcceEecCCCc---c----------CCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEH-L--------GIRDCFSEINTNPGF---V----------DEE 127 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~-~--------gl~~~fd~i~~~~~~---~----------~~~ 127 (275)
+...|.+..+|+.|++.|-++.++||+.-.++..+++. + .+.++||.|++.... + ..+
T Consensus 185 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP~FF~~~~~~~~v~~~~ 264 (470)
T 4g63_A 185 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPEN 264 (470)
T ss_dssp EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTTHHHHSCCCEEEECTTT
T ss_pred hhCCHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEECCCCCCcccCCCcceEEECCC
Confidence 44578899999999999999999999999999999886 4 467899998875431 1 011
Q ss_pred CceeecccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccc-cccCCCCeEeecC
Q 044553 128 GRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPS-LKLSEGDHVMPRK 199 (275)
Q Consensus 128 g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a-~~~~~~~~~~~~~ 199 (275)
|.+.. ... ...-.+...|. ...+.+++ +..+ .+|+||||+ ..||..+ +..||..++++..
T Consensus 265 g~l~~-~~~-----~~~~~vY~gGn--~~~l~~ll---g~~g-~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E 326 (470)
T 4g63_A 265 GTMTN-VHG-----PIVPGVYQGGN--AKKFTEDL---GVGG-DEILYIGDHIYGDILRLKKDCNWRTALVVEE 326 (470)
T ss_dssp CCEEE-CCS-----SCCSEEEEECC--HHHHHHHT---TCCG-GGEEEEESCCCSCHHHHHHSCCCEEEEECTT
T ss_pred Ccccc-ccc-----ccCCceeecCc--HHHHHHHh---CCCC-CeEEEECCchHHHHHhhhhccCCeEEEEhHH
Confidence 21110 000 00000101111 23444443 4444 599999999 6898555 4568887777643
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=0.0003 Score=58.84 Aligned_cols=45 Identities=16% Similarity=0.244 Sum_probs=28.6
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcC----CCCCcccccccCCCCeEe
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGD----GSGDYCPSLKLSEGDHVM 196 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGD----s~~Di~~a~~~~~~~~~~ 196 (275)
.+.+..|...++.+ +++. ++++++||| +.||+.+...++..++++
T Consensus 192 ~~~~vsKg~al~~l---~gi~-~~~viafGDs~~~~~NDi~Ml~~~~~~g~av 240 (262)
T 2fue_A 192 FPEGWDKRYCLDSL---DQDS-FDTIHFFGNETSPGGNDFEIFADPRTVGHSV 240 (262)
T ss_dssp EETTCSTTHHHHHH---TTSC-CSEEEEEESCCSTTSTTHHHHHSTTSEEEEC
T ss_pred ecCCCCHHHHHHHH---HCCC-HHHEEEECCCCCCCCCCHHHHhcCccCcEEe
Confidence 35666777777777 4443 467888888 788887765444333433
|
| >3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.001 Score=57.38 Aligned_cols=41 Identities=22% Similarity=0.300 Sum_probs=37.2
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCC
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDC 113 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~ 113 (275)
..||+.+||+++.+. |.++|.|++...++..+++.++....
T Consensus 165 ~RP~l~eFL~~l~~~-yeivIfTas~~~ya~~vld~Ld~~~~ 205 (320)
T 3shq_A 165 MRPYLHEFLTSAYED-YDIVIWSATSMRWIEEKMRLLGVASN 205 (320)
T ss_dssp BCTTHHHHHHHHHHH-EEEEEECSSCHHHHHHHHHHTTCTTC
T ss_pred eCCCHHHHHHHHHhC-CEEEEEcCCcHHHHHHHHHHhCCCCC
Confidence 579999999999964 99999999999999999999987654
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0013 Score=57.63 Aligned_cols=60 Identities=10% Similarity=-0.042 Sum_probs=40.5
Q ss_pred CCCeEEEEcCCC-CCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHHHHH
Q 044553 169 GNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLH 233 (275)
Q Consensus 169 ~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~l~~ 233 (275)
++++++||||+. +||.+|+++|+..+++.++.+.... . .....+ ...++++.|+.+++.+
T Consensus 289 ~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G~~~~~~-~-~~~~~p---d~vi~~l~el~~~il~ 349 (352)
T 3kc2_A 289 PFHAVFMVGDNPASDIIGAQNYGWNSCLVKTGVYNEGD-D-LKECKP---TLIVNDVFDAVTKTLE 349 (352)
T ss_dssp TSSEEEEEESCTTTHHHHHHHHTCEEEECSSSSCCTTC-C-CTTCCC---SEECSSHHHHHHHHHH
T ss_pred CcceEEEEecCcHHHHHHHHHcCCEEEEEccCCCCccc-c-cccCCC---CEEECCHHHHHHHHHH
Confidence 358999999997 6999999999977766544332211 0 001122 2368999999988754
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=95.97 E-value=0.0051 Score=50.86 Aligned_cols=42 Identities=14% Similarity=0.083 Sum_probs=35.0
Q ss_pred CCCCCchHHHHHHHHHhhhc-CCCCeEEEEcCCCCCcccccccCC
Q 044553 148 CPPNMCKGVVIERIQASLSK-EGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~-~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
.+ +..|..+++.++..++. . ++++++|||+.||+.+...+|.
T Consensus 175 ~~-g~sKg~al~~l~~~~~~~~-~~~viafGD~~NDi~Ml~~ag~ 217 (249)
T 2zos_A 175 HG-NSDKGKAAKILLDFYKRLG-QIESYAVGDSYNDFPMFEVVDK 217 (249)
T ss_dssp EC-SCCHHHHHHHHHHHHHTTS-CEEEEEEECSGGGHHHHTTSSE
T ss_pred eC-CCChHHHHHHHHHHhccCC-CceEEEECCCcccHHHHHhCCc
Confidence 45 67799999999998876 5 5899999999999999865443
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=95.84 E-value=0.0023 Score=54.13 Aligned_cols=45 Identities=18% Similarity=0.220 Sum_probs=38.0
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
++.+.+..|...++.++..++.. ++++++|||+.||+.++..+|.
T Consensus 209 ei~~~~~~K~~~~~~~~~~~~~~-~~~~~~~GD~~nD~~m~~~ag~ 253 (288)
T 1nrw_A 209 ELSSRKASKGQALKRLAKQLNIP-LEETAAVGDSLNDKSMLEAAGK 253 (288)
T ss_dssp EEEETTCSHHHHHHHHHHHTTCC-GGGEEEEESSGGGHHHHHHSSE
T ss_pred EEecCCCChHHHHHHHHHHhCCC-HHHEEEEcCCHHHHHHHHHcCc
Confidence 33567788999999999998776 4899999999999999977665
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=95.58 E-value=0.0033 Score=52.51 Aligned_cols=42 Identities=19% Similarity=0.318 Sum_probs=35.0
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
+.+..|..+++.++..++.. ++++++|||+.||+.++..+|.
T Consensus 186 ~~~~~K~~~~~~~~~~~~~~-~~~~~~~GD~~nD~~~~~~ag~ 227 (268)
T 1nf2_A 186 PKNVDKGKALRFLRERMNWK-KEEIVVFGDNENDLFMFEEAGL 227 (268)
T ss_dssp CTTCCHHHHHHHHHHHHTCC-GGGEEEEECSHHHHHHHTTCSE
T ss_pred CCCCChHHHHHHHHHHcCCC-HHHeEEEcCchhhHHHHHHcCC
Confidence 44567999999999988765 4899999999999999966554
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=95.50 E-value=0.004 Score=52.47 Aligned_cols=18 Identities=22% Similarity=0.335 Sum_probs=15.9
Q ss_pred CCceEEEEEcCCcccCCc
Q 044553 1 MSGIVVIFDFDKTIIDCD 18 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~ 18 (275)
|++|+|+||+||||++++
T Consensus 3 mm~kli~~DlDGTLl~~~ 20 (282)
T 1rkq_A 3 LAIKLIAIDMDGTLLLPD 20 (282)
T ss_dssp CCCCEEEECCCCCCSCTT
T ss_pred ccceEEEEeCCCCCCCCC
Confidence 457999999999999975
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=95.32 E-value=0.0054 Score=52.33 Aligned_cols=17 Identities=24% Similarity=0.317 Sum_probs=15.3
Q ss_pred CCceEEEEEcCCcccCC
Q 044553 1 MSGIVVIFDFDKTIIDC 17 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~ 17 (275)
|++|+|+||+||||++.
T Consensus 25 M~ikli~~DlDGTLl~~ 41 (301)
T 2b30_A 25 ADIKLLLIDFDGTLFVD 41 (301)
T ss_dssp CCCCEEEEETBTTTBCC
T ss_pred ccccEEEEECCCCCcCC
Confidence 45799999999999998
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=94.77 E-value=0.014 Score=49.01 Aligned_cols=43 Identities=21% Similarity=0.152 Sum_probs=35.0
Q ss_pred CCCCCchHHHHHHHHHhhh-cCCCCe--EEEEcCCCCCcccccccCC
Q 044553 148 CPPNMCKGVVIERIQASLS-KEGNKK--IIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~-~~~~~~--~i~vGDs~~Di~~a~~~~~ 191 (275)
.+.+.+|..+++.++..++ .. +++ +++|||+.||+.+...+|.
T Consensus 184 ~~~~~~K~~~l~~l~~~~~~~~-~~~~~~~~~GD~~nD~~m~~~ag~ 229 (275)
T 1xvi_A 184 LDASAGKDQAANWIIATYQQLS-GKRPTTLGLGDGPNDAPLLEVMDY 229 (275)
T ss_dssp EETTCCHHHHHHHHHHHHHHHH-SSCCEEEEEESSGGGHHHHHTSSE
T ss_pred ecCCCCHHHHHHHHHHHhhhcc-cccCcEEEECCChhhHHHHHhCCc
Confidence 3456679999999999887 65 467 9999999999998866544
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=93.73 E-value=0.1 Score=43.44 Aligned_cols=48 Identities=17% Similarity=0.182 Sum_probs=40.0
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeC---CCHHHHHHHHHHcCCc-CCcceEec
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSD---ANLFFIETILEHLGIR-DCFSEINT 119 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~---~~~~~i~~~l~~~gl~-~~fd~i~~ 119 (275)
++|++.++|+.|+++|++++++|| .+...+...++.+|+. ..++.+++
T Consensus 31 ~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~~~~~~~ii~ 82 (284)
T 2hx1_A 31 LLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLFSITADKIIS 82 (284)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCTTCCGGGEEE
T ss_pred eChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcCCCCHhhEEc
Confidence 368999999999999999999998 5667788888999997 66666654
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=92.14 E-value=0.064 Score=44.45 Aligned_cols=18 Identities=22% Similarity=0.495 Sum_probs=14.9
Q ss_pred CceEEEEEcCCcccCCcc
Q 044553 2 SGIVVIFDFDKTIIDCDS 19 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~ 19 (275)
++|+|+||+||||++.+.
T Consensus 12 ~~kli~~DlDGTLl~~~~ 29 (262)
T 2fue_A 12 ERVLCLFDVDGTLTPARQ 29 (262)
T ss_dssp -CEEEEEESBTTTBSTTS
T ss_pred CeEEEEEeCccCCCCCCC
Confidence 368999999999998753
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=91.96 E-value=0.051 Score=44.44 Aligned_cols=37 Identities=14% Similarity=-0.028 Sum_probs=29.8
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHc
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHL 108 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~ 108 (275)
.+.|.+.++|+.|+++| +++|+|+.+...+..+++.+
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l 59 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLD 59 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSS
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccc
Confidence 34567788999999999 99999999888887776554
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=91.00 E-value=0.28 Score=40.30 Aligned_cols=47 Identities=23% Similarity=0.152 Sum_probs=34.3
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeCCCHHHHHH---HHHHcCCcCCcceEec
Q 044553 73 HPRVVPAIKSAHALGCELRIVSDANLFFIET---ILEHLGIRDCFSEINT 119 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~---~l~~~gl~~~fd~i~~ 119 (275)
+|++.++|+.|+++|++++++||.+...... .++.+|+....+.+++
T Consensus 19 ~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~i~~ 68 (263)
T 1zjj_A 19 IPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIIT 68 (263)
T ss_dssp CTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGGEEE
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEEe
Confidence 4789999999999999999999986544443 4445687644455554
|
| >3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=90.66 E-value=0.22 Score=44.67 Aligned_cols=51 Identities=12% Similarity=0.191 Sum_probs=43.9
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcC-Ccce-EecCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRD-CFSE-INTNP 121 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~-~fd~-i~~~~ 121 (275)
+...||+.+||+++. ..|.++|.|++...++..+++.++... +|.. +++.+
T Consensus 82 V~~RPgl~eFL~~ls-~~yEivIfTas~~~YA~~Vl~~LDp~~~~f~~Rl~sRd 134 (442)
T 3ef1_A 82 IKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRD 134 (442)
T ss_dssp EEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHHHHHCTTSTTTTTCEECTT
T ss_pred EEeCCCHHHHHHHHh-CCcEEEEEcCCCHHHHHHHHHHhccCCccccceEEEec
Confidence 667899999999998 469999999999999999999998876 6764 66544
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=90.47 E-value=0.043 Score=44.95 Aligned_cols=43 Identities=16% Similarity=0.142 Sum_probs=29.7
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcC----CCCCcccccccCCCCeEe
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGD----GSGDYCPSLKLSEGDHVM 196 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGD----s~~Di~~a~~~~~~~~~~ 196 (275)
.+..|..+++.+ +++. ++++++||| +.||+.+...+|.+++++
T Consensus 185 ~~~~Kg~al~~l---~~i~-~~~viafGD~~~~~~ND~~Ml~~a~~ag~av 231 (246)
T 2amy_A 185 DGWDKRYCLRHV---ENDG-YKTIYFFGDKTMPGGNDHEIFTDPRTMGYSV 231 (246)
T ss_dssp TTCSGGGGGGGT---TTSC-CSEEEEEECSCC---CCCHHHHCTTEEEEEC
T ss_pred CCCchHHHHHHH---hCCC-HHHEEEECCCCCCCCCcHHHHHhCCcceEEe
Confidence 445689999988 5554 589999999 999999885544334443
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=89.86 E-value=0.54 Score=39.59 Aligned_cols=40 Identities=15% Similarity=0.095 Sum_probs=34.1
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeC---CCHHHHHHHHHHcCCc
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSD---ANLFFIETILEHLGIR 111 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~---~~~~~i~~~l~~~gl~ 111 (275)
++|++.++|+.|+++|++++++|| .+...+...++.+|+.
T Consensus 38 ~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 38 AVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 468899999999999999999997 4566777788888886
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=89.56 E-value=0.55 Score=38.71 Aligned_cols=47 Identities=17% Similarity=0.174 Sum_probs=38.6
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEec
Q 044553 73 HPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINT 119 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~ 119 (275)
.+.+.++|+.|+++|++++++|+.+...+..+++.+|+....+.+++
T Consensus 24 ~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~ 70 (279)
T 3mpo_A 24 AQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAIT 70 (279)
T ss_dssp CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEE
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEE
Confidence 45567889999999999999999999999999999998753344443
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=89.20 E-value=0.063 Score=44.24 Aligned_cols=36 Identities=17% Similarity=0.209 Sum_probs=28.2
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCC----CCCcccccccC
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDG----SGDYCPSLKLS 190 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs----~~Di~~a~~~~ 190 (275)
.+..|...++.++. .+++++++||+ .||+.+-..+|
T Consensus 184 ~gv~Kg~al~~L~~-----~~~ev~afGD~~~~g~NDi~Ml~~a~ 223 (246)
T 3f9r_A 184 VGWDKTYCLQFVED-----DFEEIHFFGDKTQEGGNDYEIYTDKR 223 (246)
T ss_dssp TTCSGGGGGGGTTT-----TCSEEEEEESCCSTTSTTHHHHTCTT
T ss_pred CCCCHHHHHHHHHc-----CcccEEEEeCCCCCCCCCHHHHhCCC
Confidence 34568999998887 36899999995 99998875443
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=88.83 E-value=0.74 Score=37.67 Aligned_cols=41 Identities=7% Similarity=0.100 Sum_probs=33.7
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeC---CCHHHHHHHHHHcCCcC
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSD---ANLFFIETILEHLGIRD 112 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~---~~~~~i~~~l~~~gl~~ 112 (275)
+.|++.++|+.|+++|++++++|| .+...+...++.+|+..
T Consensus 34 ~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~ 77 (271)
T 1vjr_A 34 LLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 77 (271)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred ECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 357888999999999999999995 45667777888888753
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=88.59 E-value=0.64 Score=38.29 Aligned_cols=68 Identities=16% Similarity=0.223 Sum_probs=54.1
Q ss_pred CCceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHHH
Q 044553 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAI 80 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L 80 (275)
|++|+|+||+||||++++. .+.+.+.++|
T Consensus 3 M~~kli~fDlDGTLl~~~~---------------------------------------------------~i~~~~~~al 31 (279)
T 4dw8_A 3 LKYKLIVLDLDGTLTNSKK---------------------------------------------------EISSRNRETL 31 (279)
T ss_dssp -CCCEEEECCCCCCSCTTS---------------------------------------------------CCCHHHHHHH
T ss_pred CcceEEEEeCCCCCCCCCC---------------------------------------------------ccCHHHHHHH
Confidence 4579999999999998741 2346677899
Q ss_pred HHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEec
Q 044553 81 KSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINT 119 (275)
Q Consensus 81 ~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~ 119 (275)
+.++++|+.++++|+.+...+..+++.+++..+...+++
T Consensus 32 ~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~ 70 (279)
T 4dw8_A 32 IRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILS 70 (279)
T ss_dssp HHHHHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEE
T ss_pred HHHHHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEE
Confidence 999999999999999999999999999988533333433
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=88.20 E-value=0.56 Score=37.69 Aligned_cols=61 Identities=26% Similarity=0.353 Sum_probs=51.2
Q ss_pred CCceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHHH
Q 044553 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAI 80 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L 80 (275)
||+|+|+||+||||++++. .+.+.+.++|
T Consensus 1 Mm~kli~~DlDGTLl~~~~---------------------------------------------------~i~~~~~~al 29 (231)
T 1wr8_A 1 MKIKAISIDIDGTITYPNR---------------------------------------------------MIHEKALEAI 29 (231)
T ss_dssp -CCCEEEEESTTTTBCTTS---------------------------------------------------CBCHHHHHHH
T ss_pred CceeEEEEECCCCCCCCCC---------------------------------------------------cCCHHHHHHH
Confidence 6789999999999998731 1345677899
Q ss_pred HHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcC
Q 044553 81 KSAHALGCELRIVSDANLFFIETILEHLGIRD 112 (275)
Q Consensus 81 ~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~ 112 (275)
+.|+++|++++++|+.+...+..+++.+|+..
T Consensus 30 ~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~ 61 (231)
T 1wr8_A 30 RRAESLGIPIMLVTGNTVQFAEAASILIGTSG 61 (231)
T ss_dssp HHHHHTTCCEEEECSSCHHHHHHHHHHHTCCS
T ss_pred HHHHHCCCEEEEEcCCChhHHHHHHHHcCCCC
Confidence 99999999999999999999999999888864
|
| >3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A | Back alignment and structure |
|---|
Probab=87.80 E-value=1.6 Score=35.83 Aligned_cols=82 Identities=18% Similarity=0.248 Sum_probs=53.2
Q ss_pred HHHHHHHc-CCcEEEEeCCCHHHHHHHHHHcCCcCCcc--eEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchH
Q 044553 79 AIKSAHAL-GCELRIVSDANLFFIETILEHLGIRDCFS--EINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKG 155 (275)
Q Consensus 79 ~L~~L~~~-g~~~~IvS~~~~~~i~~~l~~~gl~~~fd--~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~ 155 (275)
.|.....+ +..-++||++.---.-..+=-+|+..+|. .|+++.. .+|.
T Consensus 167 ~L~~i~sr~~~vNVLVTs~qLVPaLaK~LLygL~~~fpieNIYSa~k-----------------------------iGKe 217 (274)
T 3geb_A 167 ALNLINSRPNCVNVLVTTTQLIPALAKVLLYGLGSVFPIENIYSATK-----------------------------TGKE 217 (274)
T ss_dssp HHHHHHHSTTEEEEEEESSCHHHHHHHHHHTTCTTTSCGGGEEETTT-----------------------------TCHH
T ss_pred HHHhhccCCceeEEEEecCchHHHHHHHHHhhcccceecccccchhh-----------------------------cCHH
Confidence 34444443 45557888875433323333468888875 6776442 2488
Q ss_pred HHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 156 VVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 156 ~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
..++++..+++.. -.-++|||+..--.+|+.+++
T Consensus 218 sCFerI~~RFG~k--~~yvvIGDG~eEe~AAk~~n~ 251 (274)
T 3geb_A 218 SCFERIMQRFGRK--AVYVVIGDGVEEEQGAKKHNM 251 (274)
T ss_dssp HHHHHHHHHHCTT--SEEEEEESSHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCC--ceEEEECCCHHHHHHHHHcCC
Confidence 9999999998632 477889999776677766554
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=86.44 E-value=2.9 Score=33.83 Aligned_cols=60 Identities=25% Similarity=0.451 Sum_probs=50.0
Q ss_pred CCceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHHH
Q 044553 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAI 80 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L 80 (275)
|++|+|+||+||||++++. .+.+...++|
T Consensus 1 M~~kli~~DlDGTLl~~~~---------------------------------------------------~i~~~~~~al 29 (258)
T 2pq0_A 1 MGRKIVFFDIDGTLLDEQK---------------------------------------------------QLPLSTIEAV 29 (258)
T ss_dssp -CCCEEEECTBTTTBCTTS---------------------------------------------------CCCHHHHHHH
T ss_pred CCceEEEEeCCCCCcCCCC---------------------------------------------------ccCHHHHHHH
Confidence 6679999999999998832 1245667899
Q ss_pred HHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 81 KSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 81 ~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
+.++++|++++++|+.+...+...++.++++
T Consensus 30 ~~l~~~G~~~~~aTGR~~~~~~~~~~~l~~~ 60 (258)
T 2pq0_A 30 RRLKQSGVYVAIATGRAPFMFEHVRKQLGID 60 (258)
T ss_dssp HHHHHTTCEEEEECSSCGGGSHHHHHHHTCC
T ss_pred HHHHHCCCEEEEECCCChHHHHHHHHhcCCC
Confidence 9999999999999999988888888888875
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=86.38 E-value=1.9 Score=35.39 Aligned_cols=60 Identities=13% Similarity=0.227 Sum_probs=46.8
Q ss_pred CCceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCC-HHHH
Q 044553 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPR-VVPA 79 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg-~~e~ 79 (275)
|++|+|+||+||||++++. .+.+. +.++
T Consensus 1 m~~kli~~DlDGTLl~~~~---------------------------------------------------~i~~~~~~~a 29 (271)
T 1rlm_A 1 MAVKVIVTDMDGTFLNDAK---------------------------------------------------TYNQPRFMAQ 29 (271)
T ss_dssp -CCCEEEECCCCCCSCTTS---------------------------------------------------CCCHHHHHHH
T ss_pred CCccEEEEeCCCCCCCCCC---------------------------------------------------cCCHHHHHHH
Confidence 7789999999999998732 11233 3688
Q ss_pred HHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 80 IKSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 80 L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
|+.|+++|++++++|+.+...+..+++.+++.
T Consensus 30 l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 61 (271)
T 1rlm_A 30 YQELKKRGIKFVVASGNQYYQLISFFPELKDE 61 (271)
T ss_dssp HHHHHHHTCEEEEECSSCHHHHGGGCTTTTTT
T ss_pred HHHHHHCCCEEEEEeCCcHHHHHHHHHhcCCC
Confidence 99999999999999999988887777666653
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=85.46 E-value=5.3 Score=32.77 Aligned_cols=61 Identities=18% Similarity=0.300 Sum_probs=50.6
Q ss_pred CCceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHHH
Q 044553 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAI 80 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L 80 (275)
|++|+|+||+||||+++.. .+.+...++|
T Consensus 4 M~~kli~fDlDGTLl~~~~---------------------------------------------------~i~~~~~~al 32 (290)
T 3dnp_A 4 MSKQLLALNIDGALLRSNG---------------------------------------------------KIHQATKDAI 32 (290)
T ss_dssp --CCEEEECCCCCCSCTTS---------------------------------------------------CCCHHHHHHH
T ss_pred CcceEEEEcCCCCCCCCCC---------------------------------------------------ccCHHHHHHH
Confidence 5589999999999998731 2345577899
Q ss_pred HHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcC
Q 044553 81 KSAHALGCELRIVSDANLFFIETILEHLGIRD 112 (275)
Q Consensus 81 ~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~ 112 (275)
+.++++|+.++++|+.+...+..+++.+|+..
T Consensus 33 ~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~ 64 (290)
T 3dnp_A 33 EYVKKKGIYVTLVTNRHFRSAQKIAKSLKLDA 64 (290)
T ss_dssp HHHHHTTCEEEEBCSSCHHHHHHHHHHTTCCS
T ss_pred HHHHHCCCEEEEECCCChHHHHHHHHHcCCCC
Confidence 99999999999999999999999999999864
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=83.13 E-value=1.3 Score=36.75 Aligned_cols=61 Identities=15% Similarity=0.134 Sum_probs=51.2
Q ss_pred CCceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHHH
Q 044553 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAI 80 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L 80 (275)
|++|+|+||+||||++++. -.+.+.+.++|
T Consensus 19 ~~~kli~~DlDGTLl~~~~--------------------------------------------------~~i~~~~~~al 48 (283)
T 3dao_A 19 GMIKLIATDIDGTLVKDGS--------------------------------------------------LLIDPEYMSVI 48 (283)
T ss_dssp CCCCEEEECCBTTTBSTTC--------------------------------------------------SCCCHHHHHHH
T ss_pred cCceEEEEeCcCCCCCCCC--------------------------------------------------CcCCHHHHHHH
Confidence 4579999999999998732 12346677899
Q ss_pred HHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 81 KSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 81 ~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
+.|+++|++++++|+.+...+..+++.+++.
T Consensus 49 ~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~ 79 (283)
T 3dao_A 49 DRLIDKGIIFVVCSGRQFSSEFKLFAPIKHK 79 (283)
T ss_dssp HHHHHTTCEEEEECSSCHHHHHHHTGGGGGG
T ss_pred HHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 9999999999999999999999998888765
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 275 | ||||
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 2e-14 | |
| d2bdua1 | 291 | c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III | 6e-13 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 9e-09 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 3e-05 |
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 68.9 bits (167), Expect = 2e-14
Identities = 42/235 (17%), Positives = 70/235 (29%), Gaps = 25/235 (10%)
Query: 5 VVIFDFDKTIIDCDSDNFVVDELG---ATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIE 61
+I DFD TI D+ ++ L + +L M L E
Sbjct: 6 FIICDFDGTITMNDNIINIMKTFAPPEWMALKDGVLSKTLSIKEGVGRMFGLLPSSLKEE 65
Query: 62 DIVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNP 121
VL+ I + + ++S FF+ +LE + +D N
Sbjct: 66 ITSFVLEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIY---CNH 122
Query: 122 GFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSG 181
D + +P CS+ C CK VI + N+ II +GD
Sbjct: 123 ASFDNDYIHIDWPHSCKGTCSNQC-----GCCKPSVIHELSEP-----NQYIIMIGDSVT 172
Query: 182 DYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHLVN 236
D D R L + + D E+ + + ++
Sbjct: 173 DVEA---AKLSDLCFARDY--LLNECREQ----NLNHLPYQDFYEIRKEIENVKE 218
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Score = 65.0 bits (158), Expect = 6e-13
Identities = 34/223 (15%), Positives = 61/223 (27%), Gaps = 40/223 (17%)
Query: 4 IVVIFDFDKTIIDCDSDNFVVDEL----------------GATDLFNQLLPTMPWNSL-- 45
+ +I DFD T+ + L Q L
Sbjct: 38 LQIITDFDMTLSRFSYNGKRCPTCHNIIDNCKLVTDECRRKLLQLKEQYYAIEVDPVLTV 97
Query: 46 --MDRMMKE--------LHSQGKTIEDIVEVLKR--IPIHPRVVPAIKSAHALGCELRIV 93
M E L QG + E++ + + G + I
Sbjct: 98 EEKFPYMVEWYTKSHGLLIEQGIPKAKLKEIVADSDVMLKEGYENFFGKLQQHGIPVFIF 157
Query: 94 SDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMC 153
S +E ++ G+ ++ +N DE G L+ F +
Sbjct: 158 SAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGAL----- 212
Query: 154 KGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVM 196
+ + N II LGD GD + ++ +H++
Sbjct: 213 -----KNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHIL 250
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.2 bits (124), Expect = 9e-09
Identities = 27/182 (14%), Positives = 63/182 (34%), Gaps = 20/182 (10%)
Query: 6 VIFDFDKTIIDCDSDNFVVDELGATDLFNQLL-----PTMPWNSLMDRMMKELHSQGKTI 60
V FD D T+I + + + G D +++ +P+ + + + + + +
Sbjct: 13 VCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQPSREQV 72
Query: 61 EDIVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTN 120
+ ++ + + P + + ++ ++S +E + L I N
Sbjct: 73 QRLIAE-QPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFAN-- 129
Query: 121 PGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGS 180
RL+ + ++ + I+ K KKII +GDG+
Sbjct: 130 --------RLKFYFNGEYAGFDETQPTAESGGK----GKVIKLLKEKFHFKKIIMIGDGA 177
Query: 181 GD 182
D
Sbjct: 178 TD 179
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 41.7 bits (96), Expect = 3e-05
Identities = 22/198 (11%), Positives = 54/198 (27%), Gaps = 2/198 (1%)
Query: 5 VVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIV 64
+++FDFD T+++ ++ + + E G + ++ L I
Sbjct: 6 LILFDFDSTLVNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLPIE 65
Query: 65 EVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFV 124
+V K I A ++ L +V+ + F + +
Sbjct: 66 KVEKAIKRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVK 125
Query: 125 DEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYC 184
D + + + + + + G +C
Sbjct: 126 DGKLTGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIA-FC 184
Query: 185 PSLKLSEG-DHVMPRKNF 201
L E D + +++
Sbjct: 185 AKPILKEKADICIEKRDL 202
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 275 | |||
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.91 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 99.91 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 99.9 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 99.9 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 99.9 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.9 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 99.89 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 99.89 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 99.87 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 99.87 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 99.86 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 99.85 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 99.84 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 99.84 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 99.83 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 99.83 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 99.78 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 99.76 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 99.76 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 99.74 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.73 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 99.72 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 99.7 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.69 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 99.68 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 99.65 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 99.64 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 99.56 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 99.46 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 99.4 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 99.34 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.31 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.3 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.29 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 99.24 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.18 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 99.11 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.1 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.08 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.04 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.99 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.92 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.89 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 98.84 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.81 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.72 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 98.68 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.62 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 98.59 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 98.55 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.47 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.36 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 98.24 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 98.23 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 97.82 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 97.77 | |
| d2bdea1 | 458 | Cytosolic IMP-GMP specific 5'-nucleotidase {Legion | 97.4 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 97.2 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 96.69 |
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.91 E-value=1.9e-24 Score=177.52 Aligned_cols=212 Identities=21% Similarity=0.204 Sum_probs=141.9
Q ss_pred ceEEEEEcCCcccCCccHHHHHHHhCCChHHH---hhc-CCCChHHHHHHHHHHHHhCCCCHHHHH-HHHhcCCCCCCHH
Q 044553 3 GIVVIFDFDKTIIDCDSDNFVVDELGATDLFN---QLL-PTMPWNSLMDRMMKELHSQGKTIEDIV-EVLKRIPIHPRVV 77 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~pg~~ 77 (275)
+.+|+|||||||+++++...+++.++.+.+.. ... +.......+...+.... +...+.+. .....++++||+.
T Consensus 4 k~lVifD~DGTL~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~pg~~ 81 (226)
T d2feaa1 4 KPFIICDFDGTITMNDNIINIMKTFAPPEWMALKDGVLSKTLSIKEGVGRMFGLLP--SSLKEEITSFVLEDAKIREGFR 81 (226)
T ss_dssp CEEEEECCTTTTBSSCHHHHHHHHHSCTHHHHHHHHHHTTSSCHHHHHHHHHTTSB--GGGHHHHHHHHHHHCCBCTTHH
T ss_pred CeEEEEeCCCCCcCchHHHHHHHHHCcchHHHHHHHHHcCcccHHHHHHHHHHHhc--cccHHHHHHHHHhccchhHHHH
Confidence 57899999999999999999999998764322 222 23344444443332211 11233333 3345688999999
Q ss_pred HHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHH
Q 044553 78 PAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVV 157 (275)
Q Consensus 78 e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~ 157 (275)
++|+.|+++|++++|+||+....++.+++++|+..+ +++++..++.++....+|.+.. .+...+...+|..+
T Consensus 82 ~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~---~~an~~~~~~~~~~~~~~~~~~-----~~~~~~k~~~~~~~ 153 (226)
T d2feaa1 82 EFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDR---IYCNHASFDNDYIHIDWPHSCK-----GTCSNQCGCCKPSV 153 (226)
T ss_dssp HHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGG---EEEEEEECSSSBCEEECTTCCC-----TTCCSCCSSCHHHH
T ss_pred HHHHHHHhcccccccCCcchhhhHHHHHHHcCCccc---eeeeeEEEeCCcceeccccccc-----cccccCCHHHHHHH
Confidence 999999999999999999999999999999988644 6666655555555555665531 01101223334444
Q ss_pred HHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHHHHHHHHH
Q 044553 158 IERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHLVNT 237 (275)
Q Consensus 158 l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~ 237 (275)
+ ..++.. +++++|||||.+|+.+|+. +++.|++.+. .+...+. ..+ +.+|++|+||..+++++.+-
T Consensus 154 ~----~~~~~~-~~~~i~iGDs~~Dl~~a~~---A~~~~a~~~~--~~~~~~~-~~~---~~~~~d~~~i~~~l~~~~~~ 219 (226)
T d2feaa1 154 I----HELSEP-NQYIIMIGDSVTDVEAAKL---SDLCFARDYL--LNECREQ-NLN---HLPYQDFYEIRKEIENVKEV 219 (226)
T ss_dssp H----HHHCCT-TCEEEEEECCGGGHHHHHT---CSEEEECHHH--HHHHHHT-TCC---EECCSSHHHHHHHHHTSHHH
T ss_pred H----HHhcCC-CceEEEEeCchhhHHHHHH---CCEEEEecch--HHHHHHc-CCC---eeecCCHHHHHHHHHHHHHH
Confidence 4 444443 5799999999999999955 5677776432 2223232 223 55899999999999988764
Q ss_pred h
Q 044553 238 I 238 (275)
Q Consensus 238 ~ 238 (275)
.
T Consensus 220 ~ 220 (226)
T d2feaa1 220 Q 220 (226)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=99.91 E-value=2.8e-24 Score=175.41 Aligned_cols=193 Identities=21% Similarity=0.240 Sum_probs=133.9
Q ss_pred CceEEEEEcCCcccCCcc-----HHHHHHHhCCChHHHhhcCCC---ChHHHHHHHHHHHHhCCCCHHHHHH--------
Q 044553 2 SGIVVIFDFDKTIIDCDS-----DNFVVDELGATDLFNQLLPTM---PWNSLMDRMMKELHSQGKTIEDIVE-------- 65 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-------- 65 (275)
.+++|+||+||||+|+.. +..+++++|.+......+... ....................+++.+
T Consensus 2 ~i~a~iFD~DGTL~dt~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (218)
T d1te2a_ 2 QILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAIS 81 (218)
T ss_dssp CCCEEEECCBTTTBCCHHHHHHHHHHHHHHTTCCGGGGGGSCCCTTCCHHHHHHHHHHHSCCSSSCHHHHHHHHHHHHHH
T ss_pred cceEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHhCCCccchhhhhhhcccccchhHHHHHHHHHHHHHH
Confidence 368999999999999855 355788888875544333322 2233333222222112222222221
Q ss_pred -HHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCC
Q 044553 66 -VLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHG 144 (275)
Q Consensus 66 -~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~ 144 (275)
......++||+.++|++|+++|++++|+||++...++.+++++|+.++|+.+++++... ..||.|
T Consensus 82 ~~~~~~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~~~~------~~Kp~~-------- 147 (218)
T d1te2a_ 82 LVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLP------YSKPHP-------- 147 (218)
T ss_dssp HHHHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSS------CCTTST--------
T ss_pred hhhccccccchHHHHHHHhhhccccccccccccccccccccccccccccccccccccccc------cchhhH--------
Confidence 22346789999999999999999999999999999999999999999999999987642 457755
Q ss_pred CCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCCh
Q 044553 145 CNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDG 224 (275)
Q Consensus 145 ~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 224 (275)
..++.++.+++.. |++++||||+.+|+.+|+++|...+++... ....+... ..+ .+.++++
T Consensus 148 -----------~~~~~~~~~l~~~-~~~~l~igD~~~di~aA~~~G~~~i~v~~~-~~~~~~~~-----~~a-~~~i~~l 208 (218)
T d1te2a_ 148 -----------QVYLDCAAKLGVD-PLTCVALEDSVNGMIASKAARMRSIVVPAP-EAQNDPRF-----VLA-NVKLSSL 208 (218)
T ss_dssp -----------HHHHHHHHHHTSC-GGGEEEEESSHHHHHHHHHTTCEEEECCCT-TTTTCGGG-----GGS-SEECSCG
T ss_pred -----------HHHHHHHHHcCCC-chhcEEEeeCHHHHHHHHHcCCEEEEECCC-CCccchhh-----cCC-CEEECCh
Confidence 6677777777765 589999999999999999999876665433 21111111 112 2367888
Q ss_pred HHH
Q 044553 225 EEL 227 (275)
Q Consensus 225 ~el 227 (275)
.||
T Consensus 209 ~el 211 (218)
T d1te2a_ 209 TEL 211 (218)
T ss_dssp GGC
T ss_pred hhC
Confidence 886
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=99.90 E-value=4e-24 Score=174.73 Aligned_cols=199 Identities=16% Similarity=0.160 Sum_probs=135.3
Q ss_pred CC-ceEEEEEcCCcccCCcc-----HHHHHHHhCCChHHHh---hcCCCChHHHHHHHHHH---HHhCCCCHHHHHH---
Q 044553 1 MS-GIVVIFDFDKTIIDCDS-----DNFVVDELGATDLFNQ---LLPTMPWNSLMDRMMKE---LHSQGKTIEDIVE--- 65 (275)
Q Consensus 1 m~-~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--- 65 (275)
|. .|+|+||+||||+|+.. +..+++.+|.+..... ..............+.. ........+.+..
T Consensus 1 M~~~k~iiFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (224)
T d2hsza1 1 MTQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQAEKELTEDEFKYFKR 80 (224)
T ss_dssp CSSCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHHHCSSCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCcccCHHHHHHHHHHHHHHCCCCCCcHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhHHHHHHHHH
Confidence 76 59999999999999865 3667888887532111 11222222222222211 1112222222111
Q ss_pred ---------HHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccC
Q 044553 66 ---------VLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFH 136 (275)
Q Consensus 66 ---------~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~ 136 (275)
......++||+.++|++|+++|++++|+||++...++.+++++|+.++|+.+++++... ..||.|
T Consensus 81 ~~~~~~~~~~~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~~~~------~~kp~p 154 (224)
T d2hsza1 81 QFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLP------EIKPHP 154 (224)
T ss_dssp HHHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSS------SCTTSS
T ss_pred HHHHHHHHhhccccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccccccccccc------cccccc
Confidence 12347799999999999999999999999999999999999999999999999877532 335544
Q ss_pred CCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeE
Q 044553 137 DFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKA 216 (275)
Q Consensus 137 ~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 216 (275)
..++.++..++.. +++++||||+.+|+.+|+.+|+..+++.++..+...+...++
T Consensus 155 -------------------~~~~~~~~~~~~~-~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~----- 209 (224)
T d2hsza1 155 -------------------APFYYLCGKFGLY-PKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKP----- 209 (224)
T ss_dssp -------------------HHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCC-----
T ss_pred -------------------hhhHHHHHHhhhh-hhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCC-----
Confidence 6677777777665 589999999999999999999876666543332233322222
Q ss_pred EEeeCCChHHHHHHH
Q 044553 217 EIHEWTDGEELEQIL 231 (275)
Q Consensus 217 ~~~~~~~~~el~~~l 231 (275)
...++++.||.+++
T Consensus 210 -d~~v~~l~dL~~ii 223 (224)
T d2hsza1 210 -DWIFDDFADILKIT 223 (224)
T ss_dssp -SEEESSGGGGGGGT
T ss_pred -CEEECCHHHHHHhh
Confidence 22578999887654
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=99.90 E-value=7.7e-24 Score=177.27 Aligned_cols=173 Identities=13% Similarity=0.028 Sum_probs=119.9
Q ss_pred CceEEEEEcCCcccCCccH------HHHHHHhCCChHHHhhcCCCC--hHHHHH---------HHHHHHHhCCCCHHHH-
Q 044553 2 SGIVVIFDFDKTIIDCDSD------NFVVDELGATDLFNQLLPTMP--WNSLMD---------RMMKELHSQGKTIEDI- 63 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~~------~~~~~~~g~~~~~~~~~~~~~--~~~~~~---------~~~~~~~~~~~~~~~~- 63 (275)
++|+|+||+||||+|+.+. ..+++++|.+....+...... -....+ ..+............+
T Consensus 1 kIkaviFD~dGTL~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (257)
T d1swva_ 1 KIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQ 80 (257)
T ss_dssp CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCCCCHHHHHTTTTSCHHHHHHHHHHSHHHHHHHHHHHSSCCCHHHHH
T ss_pred CcEEEEEcCCCCeEeCcchHHHHHHHHHHHHcCCCCCHHHHHHHhCCcHHHHHHHHhhhhhhhHHHHHHhcccCCHHHHH
Confidence 3689999999999998642 456667777643333322211 111111 1112222222222211
Q ss_pred ------HHH-----HhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCc-ceEecCCCccCCCCcee
Q 044553 64 ------VEV-----LKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCF-SEINTNPGFVDEEGRLR 131 (275)
Q Consensus 64 ------~~~-----~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~f-d~i~~~~~~~~~~g~~~ 131 (275)
.+. .....++||+.++|++|+++|++++|+||++...++.+++++|+..+| |.+++++... .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~~------~ 154 (257)
T d1swva_ 81 EMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVP------A 154 (257)
T ss_dssp HHHHHHHHHHHHHGGGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSS------C
T ss_pred HHHHHHHHHHHHHhhccCccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhccccccccccccccc------c
Confidence 111 123679999999999999999999999999999999999999999887 6777766532 4
Q ss_pred ecccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 132 IFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 132 ~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
.||+| ..+...+.+++..++++|+||||+.+|+.+|+++|+..+++.++
T Consensus 155 ~KP~p-------------------~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G 203 (257)
T d1swva_ 155 GRPYP-------------------WMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILG 203 (257)
T ss_dssp CTTSS-------------------HHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTT
T ss_pred cccCh-------------------HHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccC
Confidence 68877 56667777777655689999999999999999999876666654
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.90 E-value=7.7e-25 Score=177.23 Aligned_cols=185 Identities=16% Similarity=0.151 Sum_probs=130.9
Q ss_pred ceEEEEEcCCcccCCcc-----HHHHHHHhCCChHHH---hhcCCCChHHHHHHHHHHHHhCCCCHHHHHHH--------
Q 044553 3 GIVVIFDFDKTIIDCDS-----DNFVVDELGATDLFN---QLLPTMPWNSLMDRMMKELHSQGKTIEDIVEV-------- 66 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 66 (275)
+++++||+||||+|+.. +..+++++|.+.... ...........+..+.... +...+.+...
T Consensus 1 ~~a~iFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 77 (204)
T d2go7a1 1 KTAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDR---NLDVEVLNQVRAQSLAEK 77 (204)
T ss_dssp CCEEEECTBTTTEECHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHSCHHHHHHHHHHHH---TCCHHHHHHHHHHHHTTC
T ss_pred CEEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHHhhcccccccccccccchh---hhhHHHHHHHHHHHHHhh
Confidence 47999999999999854 466788888763322 2222223334444333322 2333332222
Q ss_pred HhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCC
Q 044553 67 LKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCN 146 (275)
Q Consensus 67 ~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~ 146 (275)
.....++||+.++|+.|+++|++++|+||+.. .+..+++++|+.++|+.+++++... ..||.|
T Consensus 78 ~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~~i~~s~~~~------~~Kp~~---------- 140 (204)
T d2go7a1 78 NAQVVLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFTEILTSQSGF------VRKPSP---------- 140 (204)
T ss_dssp GGGCEECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEEEEECGGGCC------CCTTSS----------
T ss_pred cccCcccchHHhhhhcccccccchhhhcccch-hhhhhhhhccccccccccccccccc------ccchhH----------
Confidence 23478899999999999999999999999876 5567899999999999999876532 346644
Q ss_pred cCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHH
Q 044553 147 LCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEE 226 (275)
Q Consensus 147 ~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e 226 (275)
.+++.++..++.. |++|+||||+.+|+.+|+++|+..+++.++.+. . ...++++.|
T Consensus 141 ---------~~~~~~~~~~~~~-p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~~~~-----------~---~~~~~~~~d 196 (204)
T d2go7a1 141 ---------EAATYLLDKYQLN-SDNTYYIGDRTLDVEFAQNSGIQSINFLESTYE-----------G---NHRIQALAD 196 (204)
T ss_dssp ---------HHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEESSCCSCT-----------T---EEECSSTTH
T ss_pred ---------HHHHHHHHHhCCC-CceEEEEeCCHHHHHHHHHcCCeEEEEcCCCCC-----------c---CeecCCHHH
Confidence 7788888888765 589999999999999999999876666544321 1 225688888
Q ss_pred HHHHH
Q 044553 227 LEQIL 231 (275)
Q Consensus 227 l~~~l 231 (275)
|.+++
T Consensus 197 l~~l~ 201 (204)
T d2go7a1 197 ISRIF 201 (204)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 77654
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=2.2e-23 Score=170.82 Aligned_cols=201 Identities=17% Similarity=0.165 Sum_probs=136.2
Q ss_pred ceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhc-----CCCChHHHHHHHHHHHHhCCCCHHHHHHHH-hcCCCCCCH
Q 044553 3 GIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLL-----PTMPWNSLMDRMMKELHSQGKTIEDIVEVL-KRIPIHPRV 76 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pg~ 76 (275)
.++|+|||||||++++++..++..+|......... +...+.+.+......+. +...+.+.... ..+.++||+
T Consensus 10 ~~aV~FD~DGTLi~~e~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~pg~ 87 (217)
T d1nnla_ 10 ADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQ--PSREQVQRLIAEQPPHLTPGI 87 (217)
T ss_dssp CSEEEEETBTTTBSSCHHHHHHHHTTCTTTC------------CHHHHHHHHHHHHC--CCHHHHHHHHHHSCCCBCTTH
T ss_pred CCEEEEcCccccCCccHHHHHHHHcCChHHHHHHHHHHHcCCCCHHHHHHHHHHhcc--cchHHHHHHHHhhccccCHHH
Confidence 57999999999999999988888888764322221 22344444444433332 22223333333 347789999
Q ss_pred HHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHH
Q 044553 77 VPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGV 156 (275)
Q Consensus 77 ~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~ 156 (275)
.+++++|+++|++++|+|++....++.+++.+|++.+ .+++++..+..+|...+...+. + |....+|..
T Consensus 88 ~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~--~v~an~~~~~~~G~~~g~~~~~------p---~~~~~~K~~ 156 (217)
T d1nnla_ 88 RELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPAT--NVFANRLKFYFNGEYAGFDETQ------P---TAESGGKGK 156 (217)
T ss_dssp HHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGG--GEEEECEEECTTSCEEEECTTS------G---GGSTTHHHH
T ss_pred HHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCccc--ceeeeeeeeeehhccccceeee------e---eeccchHHH
Confidence 9999999999999999999999999999999999743 6788887777778776643221 0 122456999
Q ss_pred HHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHH
Q 044553 157 VIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELE 228 (275)
Q Consensus 157 ~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~ 228 (275)
+++.+..+.+ +++|++||||.+|+.+++.+| +.++-.+.+..+..+++..+ .+.+|.||+
T Consensus 157 ~v~~~~~~~~---~~~~~~vGDs~~Di~~~~~ag---~~va~~~~~~~~~~~~~ad~------~i~~f~ell 216 (217)
T d1nnla_ 157 VIKLLKEKFH---FKKIIMIGDGATDMEACPPAD---AFIGFGGNVIRQQVKDNAKW------YITDFVELL 216 (217)
T ss_dssp HHHHHHHHHC---CSCEEEEESSHHHHTTTTTSS---EEEEECSSCCCHHHHHHCSE------EESCGGGGC
T ss_pred HHHHHHhccC---ccccEEEEeCHhhHHHHHhCC---ceEEECCCHHHHHHHHhCCC------EeCCHHHhc
Confidence 9998876543 579999999999999996654 44443333333444443322 346777763
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=99.89 E-value=3.4e-25 Score=179.85 Aligned_cols=190 Identities=13% Similarity=0.114 Sum_probs=129.0
Q ss_pred CCceEEEEEcCCcccCCcc-----HHHHHHHhCCChHHHhhcC--CCChHHHHHHHHHHHHhCCCCHHHHH----H----
Q 044553 1 MSGIVVIFDFDKTIIDCDS-----DNFVVDELGATDLFNQLLP--TMPWNSLMDRMMKELHSQGKTIEDIV----E---- 65 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~----~---- 65 (275)
|+.|+|+||+||||+|+.. +..+++.+|.+....+... ...... .+..........+++. +
T Consensus 1 M~~k~viFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (207)
T d2hdoa1 1 MTYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTFPMAAEQ----AMTELGIAASEFDHFQAQYEDVMAS 76 (207)
T ss_dssp CCCSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCHHHHHHHTTSCHHH----HHHHTTCCGGGHHHHHHHHHHHHTT
T ss_pred CCCcEEEEeCCCCcCcCHHHHHHHHHHHHHHcCCCCCHHHHHHHhcchhhh----hhhccccchhhHHHHHHHhhhhhcc
Confidence 8889999999999999854 3567777777532222211 111111 1111111111122222 1
Q ss_pred HHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCC
Q 044553 66 VLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGC 145 (275)
Q Consensus 66 ~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~ 145 (275)
...+..++||+.++|++|++ +++++|+||+....++.+++++|+..+|+.+++++... ..||.|
T Consensus 77 ~~~~~~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~------~~KP~p--------- 140 (207)
T d2hdoa1 77 HYDQIELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTP------KRKPDP--------- 140 (207)
T ss_dssp CGGGCEECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSS------CCTTSS---------
T ss_pred cccccccccchhhhhhhhcc-cccccccccccccccccccccccccccccccccccccc------cchhhh---------
Confidence 23457899999999999985 69999999999999999999999999999999876532 456655
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChH
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGE 225 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 225 (275)
.+++.++.+++.. |++|+|||||.+|+.+|+++|...+.+..+..+..++ ++ + .+.++++.
T Consensus 141 ----------~~~~~~~~~~~~~-~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~--~~-----~-~~~i~~l~ 201 (207)
T d2hdoa1 141 ----------LPLLTALEKVNVA-PQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADH--QK-----V-AHRFQKPL 201 (207)
T ss_dssp ----------HHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGG--SC-----C-SEEESSGG
T ss_pred ----------hhhcccccceeee-ccceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHh--hh-----c-CcEeCCHH
Confidence 6778888887765 5899999999999999999998655544332222211 11 1 12467888
Q ss_pred HHHH
Q 044553 226 ELEQ 229 (275)
Q Consensus 226 el~~ 229 (275)
||++
T Consensus 202 dll~ 205 (207)
T d2hdoa1 202 DILE 205 (207)
T ss_dssp GGGG
T ss_pred HHHh
Confidence 8765
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.89 E-value=2.1e-23 Score=171.54 Aligned_cols=137 Identities=15% Similarity=0.145 Sum_probs=103.5
Q ss_pred cCCCCCCHHHHHHHHHHcC-CcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCc
Q 044553 69 RIPIHPRVVPAIKSAHALG-CELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNL 147 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g-~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~ 147 (275)
...++||+.++|+.|+++| ++++|+||+....++..++.+|+.++||.+++++... ..||.|.
T Consensus 89 ~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~------~~k~~p~---------- 152 (228)
T d2hcfa1 89 DITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDAL------DRNELPH---------- 152 (228)
T ss_dssp GEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCS------SGGGHHH----------
T ss_pred CceecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccccccccccc------cccchhH----------
Confidence 3578999999999999987 8999999999999999999999999999998876532 3344331
Q ss_pred CCCCCchHHHHHHHHHhhh-cCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHH
Q 044553 148 CPPNMCKGVVIERIQASLS-KEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEE 226 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~-~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e 226 (275)
..++.+....+ ...|++|+||||+.+|+.+|+++|+..+.+..+.++..+|...++. ..++++.|
T Consensus 153 --------~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad------~vi~~~~e 218 (228)
T d2hcfa1 153 --------IALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPG------TLFKNFAE 218 (228)
T ss_dssp --------HHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCS------EEESCSCC
T ss_pred --------HHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCC------EEECCHHH
Confidence 22333332221 1135899999999999999999998777766666666666544432 25789999
Q ss_pred HHHHHHHHH
Q 044553 227 LEQILLHLV 235 (275)
Q Consensus 227 l~~~l~~~~ 235 (275)
|.++|..++
T Consensus 219 l~~~l~~l~ 227 (228)
T d2hcfa1 219 TDEVLASIL 227 (228)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999888765
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.87 E-value=8e-23 Score=165.72 Aligned_cols=193 Identities=15% Similarity=0.136 Sum_probs=131.9
Q ss_pred CC-ceEEEEEcCCcccCCcc-----HHHHHHHhCCChHHHhh---cCCCChHHHHHHHHHHHHhCCC--CHHHHH-----
Q 044553 1 MS-GIVVIFDFDKTIIDCDS-----DNFVVDELGATDLFNQL---LPTMPWNSLMDRMMKELHSQGK--TIEDIV----- 64 (275)
Q Consensus 1 m~-~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----- 64 (275)
|. +++|+||+||||+|+.. +..+++++|++....+. ..+..........+. .... ..+.+.
T Consensus 1 M~~ik~VifD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 77 (210)
T d2ah5a1 1 MTSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATCLS---KDQISEAVQIYRSYYKA 77 (210)
T ss_dssp CTTCCEEEECSBTTTEECHHHHHHHHHHHHHHHTCCCCCHHHHHHTSSSCHHHHHHTTSC---GGGHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHhhhcchhhhcccccc---chhhHHHHHHHHHHHHh
Confidence 65 79999999999999854 46677888875321111 111222222211110 0000 001111
Q ss_pred HHHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCC
Q 044553 65 EVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHG 144 (275)
Q Consensus 65 ~~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~ 144 (275)
.......++|++.++|+.|+.+ ++++|+||++...++..++++|+..+|+.+++.+.. +||
T Consensus 78 ~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~~~~~--------~~~---------- 138 (210)
T d2ah5a1 78 KGIYEAQLFPQIIDLLEELSSS-YPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPE--------APH---------- 138 (210)
T ss_dssp TGGGSCEECTTHHHHHHHHHTT-SCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECSS--------CCS----------
T ss_pred hhhhcccchhHHHHHHhhhhcc-cchhhcccccchhhhHHHHhhccccccccccccccc--------ccc----------
Confidence 1123578899999999999876 599999999999999999999999999999876542 232
Q ss_pred CCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCCh
Q 044553 145 CNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDG 224 (275)
Q Consensus 145 ~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 224 (275)
|+..++.++..++.. |++++|||||.+|+.+|+++|...+++..+.....++...++ .+.++++
T Consensus 139 ---------~p~~~~~~~~~~~~~-~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~p------d~vi~~l 202 (210)
T d2ah5a1 139 ---------KADVIHQALQTHQLA-PEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQP------DYIAHKP 202 (210)
T ss_dssp ---------HHHHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCC------SEEESST
T ss_pred ---------cccccchhhhhhhcc-cccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCC------CEEECCH
Confidence 557788888888765 589999999999999999999877776544334445443332 2258999
Q ss_pred HHHHHHH
Q 044553 225 EELEQIL 231 (275)
Q Consensus 225 ~el~~~l 231 (275)
.||.++|
T Consensus 203 ~el~~~l 209 (210)
T d2ah5a1 203 LEVLAYF 209 (210)
T ss_dssp THHHHHT
T ss_pred HHHHHHh
Confidence 9998875
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.87 E-value=2.2e-22 Score=160.80 Aligned_cols=166 Identities=16% Similarity=0.128 Sum_probs=114.5
Q ss_pred CCceEEEEEcCCcccCCcc-----HHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCC-HHHHH----HHHhcC
Q 044553 1 MSGIVVIFDFDKTIIDCDS-----DNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKT-IEDIV----EVLKRI 70 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~ 70 (275)
|++++|+||+||||+|+.. +..+++.+|++.......... .......++........ .+.+. ....+.
T Consensus 1 M~~k~viFD~DGTL~dt~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (187)
T d2fi1a1 1 MKYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQAL--KVSTPFAIETFAPNLENFLEKYKENEARELEHP 78 (187)
T ss_dssp CCCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHH--HHCHHHHHHHHCTTCTTHHHHHHHHHHHHTTSC
T ss_pred CCCCEEEEeCCCCcccCHHHHHHHHHHHHHHcCCCccHHHHHhhh--hccchhhhhhhhHHHHHHHHHHHHHHHHHhhcC
Confidence 8899999999999999643 356677778753222211100 00111122222111111 22222 234568
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCC
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPP 150 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~ 150 (275)
.++||+.++|++|+++|++++|+||++.... ..++++++..+|+.+++++... ..||+|
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~fd~i~~~~~~~------~~KP~p-------------- 137 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYFTEVVTSSSGF------KRKPNP-------------- 137 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGEEEEECGGGCC------CCTTSC--------------
T ss_pred cccchhHHHHHHHHhhhccccccccCccchh-hhhhhhcccccccccccccccc------ccCCCH--------------
Confidence 8999999999999999999999999887655 5799999999999999876532 457766
Q ss_pred CCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEee
Q 044553 151 NMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMP 197 (275)
Q Consensus 151 ~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~ 197 (275)
+.++.++.+++ +++|+||||+..|+.+|+++|...+.+.
T Consensus 138 -----~~~~~~~~~~~---~~~~l~vgDs~~Di~aA~~aG~~~i~v~ 176 (187)
T d2fi1a1 138 -----ESMLYLREKYQ---ISSGLVIGDRPIDIEAGQAAGLDTHLFT 176 (187)
T ss_dssp -----HHHHHHHHHTT---CSSEEEEESSHHHHHHHHHTTCEEEECS
T ss_pred -----HHHHHHHHHcC---CCCeEEEeCCHHHHHHHHHcCCEEEEEC
Confidence 56667777665 4579999999999999999887655543
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.86 E-value=5.9e-22 Score=163.06 Aligned_cols=132 Identities=21% Similarity=0.238 Sum_probs=104.4
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCc
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNL 147 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~ 147 (275)
....++||+.++|++|+ +|++++|+||++...++.+++.+|+.++|+.+++++... ..||+|
T Consensus 97 ~~~~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~------~~KP~~----------- 158 (230)
T d1x42a1 97 RYGELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAG------FFKPHP----------- 158 (230)
T ss_dssp HHCCBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEHHHHT------BCTTSH-----------
T ss_pred hhCcccccHHHHHHHhh-ccCceeeeeccccccchhhhccccccccccccccccccc------ccchhh-----------
Confidence 34788999999999997 479999999999999999999999999999999876431 346654
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHH
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEE 226 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e 226 (275)
++++.++.+++.. |++|+||||+ .+|+.+|+.+|+..+++.+.+.... ...+ + .+.++++.|
T Consensus 159 --------~~~~~~~~~l~~~-p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~--~~~~-----~-d~~i~~l~e 221 (230)
T d1x42a1 159 --------RIFELALKKAGVK-GEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKRE--FWDK-----C-DFIVSDLRE 221 (230)
T ss_dssp --------HHHHHHHHHHTCC-GGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGG--GGGG-----S-SEEESSTTH
T ss_pred --------HHHHHHHhhhccc-ccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcc--cccC-----C-CEEECCHHH
Confidence 6788888888766 5899999998 5899999999998777766544211 1111 1 236899999
Q ss_pred HHHHHHHH
Q 044553 227 LEQILLHL 234 (275)
Q Consensus 227 l~~~l~~~ 234 (275)
|.+.|+++
T Consensus 222 l~~~l~~l 229 (230)
T d1x42a1 222 VIKIVDEL 229 (230)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHc
Confidence 99998864
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.85 E-value=4.7e-21 Score=156.46 Aligned_cols=199 Identities=13% Similarity=0.142 Sum_probs=138.6
Q ss_pred ceEEEEEcCCcccCCcc-----HHHHHHHhCCChH---HHhhcCCCChHHHHHHHHHHHHhCCCCH---HHHHH-----H
Q 044553 3 GIVVIFDFDKTIIDCDS-----DNFVVDELGATDL---FNQLLPTMPWNSLMDRMMKELHSQGKTI---EDIVE-----V 66 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~ 66 (275)
.++||||+||||+|+.. +..+++++|++.. ......+..+......+...... .... +.+.. .
T Consensus 2 ~kaviFD~DGtL~dt~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 80 (222)
T d2fdra1 2 FDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEASI-PLSASLLDKSEKLLDMRL 80 (222)
T ss_dssp CSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCCHHHHHHHHHHHHCC-CCCTHHHHHHHHHHHHHH
T ss_pred ceEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHhhhccccccccccccccc-cccccchhHHHHHHHHHh
Confidence 58999999999999865 3567888887633 22334455666666666555432 2222 22211 2
Q ss_pred HhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCC
Q 044553 67 LKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCN 146 (275)
Q Consensus 67 ~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~ 146 (275)
.....++||+.++|+.|+ .+.+|+||+....++..++++|+.++|+.+++..... |....||.|
T Consensus 81 ~~~~~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~---~~~~~KP~~---------- 144 (222)
T d2fdra1 81 ERDVKIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDL---GADRVKPKP---------- 144 (222)
T ss_dssp HHHCCBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHH---CTTCCTTSS----------
T ss_pred hhccchhhhHHHHhhhcc---ccceeeeecchhhhhhhhcccccccccceeecccccc---cccccccCH----------
Confidence 345889999999998876 4668999999999999999999999998655432211 122456655
Q ss_pred cCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCch----hhHHHhhCCCceeEEEeeCC
Q 044553 147 LCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFP----LWDLIIRNPMLIKAEIHEWT 222 (275)
Q Consensus 147 ~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~ 222 (275)
..+...+.+++.. |++|+||||+..|+.+|+++|+..+++...... ...+...++ ...++
T Consensus 145 ---------~~~~~~~~~l~~~-p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~a------d~vi~ 208 (222)
T d2fdra1 145 ---------DIFLHGAAQFGVS-PDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGA------ETVIS 208 (222)
T ss_dssp ---------HHHHHHHHHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTC------SEEES
T ss_pred ---------HHHHHHHHhhCCC-CceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCC------CEEEC
Confidence 5677777777765 589999999999999999999887777654322 222333333 23689
Q ss_pred ChHHHHHHHHHH
Q 044553 223 DGEELEQILLHL 234 (275)
Q Consensus 223 ~~~el~~~l~~~ 234 (275)
++.||..+|..+
T Consensus 209 ~l~eL~~ll~~l 220 (222)
T d2fdra1 209 RMQDLPAVIAAM 220 (222)
T ss_dssp CGGGHHHHHHHH
T ss_pred CHHHHHHHHHHh
Confidence 999998888765
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.84 E-value=4.4e-21 Score=159.14 Aligned_cols=136 Identities=12% Similarity=0.021 Sum_probs=103.4
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCc
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNL 147 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~ 147 (275)
....++||+.++|+.|+ +|++++|+||++...++..++++|+.++|+.+++++... ..||+|
T Consensus 106 ~~~~~~~~~~~~L~~L~-~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~------~~KP~p----------- 167 (247)
T d2gfha1 106 QHMILADDVKAMLTELR-KEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQK------EEKPAP----------- 167 (247)
T ss_dssp HTCCCCHHHHHHHHHHH-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSS------SCTTCH-----------
T ss_pred ccCccCccHHHHHHHhh-cccceEEeecccchhhhhhhhhccccccccccccccccc------cchhhh-----------
Confidence 56889999999999998 579999999999999999999999999999988776532 457766
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCC-CCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHH
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEE 226 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e 226 (275)
.+++.++..++.. |++|+||||+. +|+.+|+.+|+..+.+......... .....+ ...++++.|
T Consensus 168 --------~~~~~~~~~~~~~-~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~---~~~~~p---~~~i~~l~e 232 (247)
T d2gfha1 168 --------SIFYHCCDLLGVQ-PGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPL---TSSPMP---HYMVSSVLE 232 (247)
T ss_dssp --------HHHHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCS---SCCCCC---SEEESSGGG
T ss_pred --------hhHHHHHHHhhcC-HHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcc---cccCCC---CEEECCHHH
Confidence 6788888887765 58999999995 8999999999875554332221100 111112 236789999
Q ss_pred HHHHHHHHHH
Q 044553 227 LEQILLHLVN 236 (275)
Q Consensus 227 l~~~l~~~~~ 236 (275)
|..+|+++=.
T Consensus 233 L~~ll~~i~~ 242 (247)
T d2gfha1 233 LPALLQSIDC 242 (247)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhh
Confidence 9988886543
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=99.84 E-value=2e-21 Score=158.59 Aligned_cols=168 Identities=14% Similarity=0.168 Sum_probs=119.7
Q ss_pred CceEEEEEcCCcccCCcc-----HHHHHHHhCCChHH---HhhcCCCChHHHHHHHHHHHHhCCCCHHHHH---------
Q 044553 2 SGIVVIFDFDKTIIDCDS-----DNFVVDELGATDLF---NQLLPTMPWNSLMDRMMKELHSQGKTIEDIV--------- 64 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 64 (275)
|+|+|+||+||||+|+.. +..+++.+|.+... ................+... ....+.+.+.
T Consensus 1 MikaiiFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 79 (221)
T d1o08a_ 1 MFKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLA-DKKVSAEEFKELAKRKNDN 79 (221)
T ss_dssp CCCEEEECCBTTTBTHHHHHHHHHHHHHHHTTCCCCCHHHHTTTTTCCHHHHHHHHHTTS-SSCCCHHHHHHHHHHHHHH
T ss_pred CCcEEEEcCCCCeEcCHHHHHHHHHHHHHHcCCCCChHHHHHHHhhccchhhhhhccccc-cccchhhhhhhHHHHHHhh
Confidence 568999999999999754 35677778875332 22222333333333332211 1233333322
Q ss_pred --HHHh---cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCC
Q 044553 65 --EVLK---RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFT 139 (275)
Q Consensus 65 --~~~~---~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~ 139 (275)
+... ...++||+.++|+.|++.|++++++||+. .....++.+|+.++|+.+++++... .+||.|
T Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~~--~~~~~l~~~~l~~~f~~i~~~~~~~------~~KP~~--- 148 (221)
T d1o08a_ 80 YVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASK--NGPFLLERMNLTGYFDAIADPAEVA------ASKPAP--- 148 (221)
T ss_dssp HHHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHTTCGGGCSEECCTTTSS------SCTTST---
T ss_pred ccccccccccccccCCceeccccccccccceEEEeecc--hhhHHHHhhcccccccccccccccc------ccccCh---
Confidence 1111 35689999999999999999999999974 4678899999999999998876532 457765
Q ss_pred CCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeec
Q 044553 140 KCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPR 198 (275)
Q Consensus 140 ~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~ 198 (275)
.+++.++.+++.. |++|+||||+.+|+.+|+.+|+..+++.+
T Consensus 149 ----------------~~~~~~l~~~~i~-~~~~l~VgD~~~di~~A~~aG~~~i~v~~ 190 (221)
T d1o08a_ 149 ----------------DIFIAAAHAVGVA-PSESIGLEDSQAGIQAIKDSGALPIGVGR 190 (221)
T ss_dssp ----------------HHHHHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEESC
T ss_pred ----------------HHHHHHHHHcCCC-CceEEEEecCHHHHHHHHHcCCEEEEECC
Confidence 6788888888875 58999999999999999999987776654
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=99.83 E-value=3.2e-21 Score=156.99 Aligned_cols=131 Identities=16% Similarity=0.172 Sum_probs=106.0
Q ss_pred HhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCC
Q 044553 67 LKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCN 146 (275)
Q Consensus 67 ~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~ 146 (275)
.....++|++.++++.+++.+++++++||+....++..+++.++..+||.+++++... ..||+|
T Consensus 89 ~~~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~~------~~KP~p---------- 152 (220)
T d1zrna_ 89 YLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQ------VYKPDN---------- 152 (220)
T ss_dssp GGGCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGT------CCTTSH----------
T ss_pred hccccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeeeeeee------ccccHH----------
Confidence 4557899999999999999999999999999999999999999999999999876532 457766
Q ss_pred cCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHH
Q 044553 147 LCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEE 226 (275)
Q Consensus 147 ~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e 226 (275)
+.++..+..++.. |++|+||||+..|+.+|+++|+..+++.+.+....++ ...+ ...++++.|
T Consensus 153 ---------~~~~~~~~~~g~~-p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~----~~~~---d~~i~~l~e 215 (220)
T d1zrna_ 153 ---------RVYELAEQALGLD-RSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEM----GQTP---DWEVTSLRA 215 (220)
T ss_dssp ---------HHHHHHHHHHTSC-GGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSS----SCCC---SEEESSHHH
T ss_pred ---------HHHHHHHHHhCCC-CceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccc----cCCC---CEEECCHHH
Confidence 6777778877765 5899999999999999999999988887766543332 1112 235789998
Q ss_pred HHHH
Q 044553 227 LEQI 230 (275)
Q Consensus 227 l~~~ 230 (275)
|.++
T Consensus 216 l~~l 219 (220)
T d1zrna_ 216 VVEL 219 (220)
T ss_dssp HHTT
T ss_pred HHhh
Confidence 8753
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.83 E-value=7.1e-20 Score=151.21 Aligned_cols=139 Identities=9% Similarity=0.093 Sum_probs=106.2
Q ss_pred HhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCC
Q 044553 67 LKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCN 146 (275)
Q Consensus 67 ~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~ 146 (275)
+....++|++.++|+.|+ ++.++++||++...+...++++|+..+||.+++++... ..||+|
T Consensus 89 ~~~~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v~~s~~~~------~~KP~p---------- 150 (245)
T d1qq5a_ 89 YNRLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKR------VFKPHP---------- 150 (245)
T ss_dssp GGSCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGT------CCTTSH----------
T ss_pred ccccccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccccccccccccccc------ccCccH----------
Confidence 445789999999999886 68999999999999999999999999999999877532 457776
Q ss_pred cCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHH----------------HhhC
Q 044553 147 LCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDL----------------IIRN 210 (275)
Q Consensus 147 ~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l----------------~~~~ 210 (275)
+++...+++++.. |++|+||||+.+|+.+|+++|+..+++.|.+.+.... ....
T Consensus 151 ---------~~f~~a~~~lg~~-p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (245)
T d1qq5a_ 151 ---------DSYALVEEVLGVT-PAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMRE 220 (245)
T ss_dssp ---------HHHHHHHHHHCCC-GGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSC
T ss_pred ---------HHHHHHHHHhCCC-hhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhh
Confidence 6777888888765 5899999999999999999999988887765321110 0000
Q ss_pred CC-ceeEEEeeCCChHHHHHHHHHH
Q 044553 211 PM-LIKAEIHEWTDGEELEQILLHL 234 (275)
Q Consensus 211 ~~-~~~~~~~~~~~~~el~~~l~~~ 234 (275)
.. ...+ .+...++.||..+|+.+
T Consensus 221 ~~~~~~p-d~~i~~l~el~~lv~~~ 244 (245)
T d1qq5a_ 221 ETYAEAP-DFVVPALGDLPRLVRGM 244 (245)
T ss_dssp CTTSCCC-SEEESSGGGHHHHHHHH
T ss_pred hhccCCC-CEEECCHHHHHHHHHhh
Confidence 00 0112 23578999999888754
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=99.78 E-value=1e-19 Score=149.92 Aligned_cols=107 Identities=15% Similarity=0.148 Sum_probs=89.0
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecC-CCccCCCCceeecccCCCCCCCCCCCc
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTN-PGFVDEEGRLRIFPFHDFTKCSHGCNL 147 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~-~~~~~~~g~~~~kp~~~~~~~~~~~~~ 147 (275)
...++||+.++|++|+++|++++|+||++...++..++..|+.++|+...+. +.. ...||+|
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d~~------~~~KP~p----------- 187 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTK------IGHKVES----------- 187 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGG------GCCTTCH-----------
T ss_pred ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcceeeccc------cccCCCc-----------
Confidence 3678999999999999999999999999999999999999999888754332 211 1357755
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCc
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNF 201 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~ 201 (275)
.++...+..++.. |++|+||||+.+|+.+|+++|+..+++.+.|.
T Consensus 188 --------~~~~~~~~~~~~~-p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~ 232 (253)
T d1zs9a1 188 --------ESYRKIADSIGCS-TNNILFLTDVTREASAAEEADVHVAVVVRPGN 232 (253)
T ss_dssp --------HHHHHHHHHHTSC-GGGEEEEESCHHHHHHHHHTTCEEEEECCTTC
T ss_pred --------HHHHHHHHHhCCC-cCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCC
Confidence 6777888887776 58999999999999999999999888877654
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.76 E-value=1e-19 Score=142.25 Aligned_cols=102 Identities=16% Similarity=0.209 Sum_probs=81.6
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCH-HHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCC
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANL-FFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCN 146 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~-~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~ 146 (275)
..+.++||+.++|++|+++|++++|+||+.. ...+..++.+++..+|+.+.+.. ||
T Consensus 43 ~~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----------kp------------ 99 (164)
T d1u7pa_ 43 QNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIYP-----------GS------------ 99 (164)
T ss_dssp CEECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSEEEESS-----------SC------------
T ss_pred cccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccceeeeccc-----------CC------------
Confidence 3578999999999999999999999998765 56677889999998888776422 33
Q ss_pred cCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCc
Q 044553 147 LCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNF 201 (275)
Q Consensus 147 ~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~ 201 (275)
|...+..++..++.. |++|+||||+..|+.+|+++|...+.+ .+|+
T Consensus 100 -------~~~~~~~~~~~~~~~-~~~~l~igD~~~di~aA~~aG~~~i~v-~~G~ 145 (164)
T d1u7pa_ 100 -------KVTHFERLHHKTGVP-FSQMVFFDDENRNIIDVGRLGVTCIHI-RDGM 145 (164)
T ss_dssp -------HHHHHHHHHHHHCCC-GGGEEEEESCHHHHHHHHTTTCEEEEC-SSCC
T ss_pred -------ChHHHHHHHHHhCCC-hHHEEEEcCCHHHHHHHHHcCCEEEEE-CCCC
Confidence 456777788887765 589999999999999999988765544 4444
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.76 E-value=1.2e-19 Score=147.70 Aligned_cols=116 Identities=12% Similarity=0.090 Sum_probs=91.6
Q ss_pred HHHhcCCCCCCHHHHHHHHHHcCCcEEEEeCC----CHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCC
Q 044553 65 EVLKRIPIHPRVVPAIKSAHALGCELRIVSDA----NLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTK 140 (275)
Q Consensus 65 ~~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~----~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~ 140 (275)
+......++|++.++|.+|+++|++++++||+ .....+..+...|+.++||.+++++... ..||.|
T Consensus 91 ~~~~~~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~------~~KP~p---- 160 (222)
T d1cr6a1 91 QAMAARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVG------MIKPEP---- 160 (222)
T ss_dssp HHHHTCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHS------CCTTCH----
T ss_pred HHHhcCCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhcc------CCCCCh----
Confidence 34566889999999999999999999999985 3345666677889999999999876532 347755
Q ss_pred CCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHH
Q 044553 141 CSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDL 206 (275)
Q Consensus 141 ~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l 206 (275)
++++..+..++.. |++|+||||+.+|+.+|+++|+..+.+.+......+|
T Consensus 161 ---------------~~~~~~~~~~~v~-p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~~el 210 (222)
T d1cr6a1 161 ---------------QIYNFLLDTLKAK-PNEVVFLDDFGSNLKPARDMGMVTILVHNTASALREL 210 (222)
T ss_dssp ---------------HHHHHHHHHHTSC-TTSEEEEESSSTTTHHHHHHTCEEEECCSSSHHHHHH
T ss_pred ---------------HHHHHHHHHhCCC-cceEEEEECCHHHHHHHHHcCCEEEEECCcchHHHHH
Confidence 6777788877765 5899999999999999999999877776654444443
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.74 E-value=7.4e-19 Score=142.35 Aligned_cols=110 Identities=11% Similarity=0.061 Sum_probs=86.5
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHH----HHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCC
Q 044553 63 IVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLF----FIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDF 138 (275)
Q Consensus 63 ~~~~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~----~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~ 138 (275)
+........++|++.++|+.|+++|++++++||+... ..+......++.++||.|++++... ..||+|
T Consensus 91 ~~~~~~~~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~------~~KP~~-- 162 (225)
T d1zd3a1 91 FDKAISARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVG------MVKPEP-- 162 (225)
T ss_dssp HHHHHHHCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHT------CCTTCH--
T ss_pred HHHHhhcCCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccc------cchhHH--
Confidence 4445667889999999999999999999999987544 3344445567889999998866432 347755
Q ss_pred CCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeec
Q 044553 139 TKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPR 198 (275)
Q Consensus 139 ~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~ 198 (275)
++++..+..++.. |++|+||||+..|+.+|+++|+..+++.+
T Consensus 163 -----------------~~~~~~~~~~~~~-p~e~l~VgD~~~Di~~A~~~G~~ti~v~~ 204 (225)
T d1zd3a1 163 -----------------QIYKFLLDTLKAS-PSEVVFLDDIGANLKPARDLGMVTILVQD 204 (225)
T ss_dssp -----------------HHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHTTCEEEECSS
T ss_pred -----------------HHHHHHhhhcccC-ccceeEEecCHHHHHHHHHcCCEEEEECC
Confidence 7788888888766 58999999999999999999987766544
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.73 E-value=8.2e-18 Score=134.87 Aligned_cols=202 Identities=18% Similarity=0.241 Sum_probs=132.9
Q ss_pred CceEEEEEcCCcccCCccHHHHHHHhCCChHHHhh----cC-CCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCH
Q 044553 2 SGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQL----LP-TMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRV 76 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~ 76 (275)
++|+|+||+||||++++++..+++.+|........ .. ............. ...+..............+++++
T Consensus 3 kkKlv~FDlDGTL~d~es~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 80 (210)
T d1j97a_ 3 KKKLILFDFDSTLVNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVS--LLKDLPIEKVEKAIKRITPTEGA 80 (210)
T ss_dssp CCCEEEECCCCCCBSSCHHHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHH--TTTTCBHHHHHHHHHTCCBCTTH
T ss_pred CCeEEEEeCCCCcCCchHHHHHHHHcCCcHHHHHHHHHHhcccchhHHHHHHHHH--HHhhhHHHHHHHHhhhhhhhhhH
Confidence 57999999999999999999999999886433221 11 1112222211111 11233445555666788999999
Q ss_pred HHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHH
Q 044553 77 VPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGV 156 (275)
Q Consensus 77 ~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~ 156 (275)
.+.++.++.+|+.++++|++....+....++.+...++......+. +...... +. .+..+.+|..
T Consensus 81 ~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~~---------~~~~~~~~~~ 145 (210)
T d1j97a_ 81 EETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKD-----GKLTGDV-EG---------EVLKENAKGE 145 (210)
T ss_dssp HHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEET-----TEEEEEE-EC---------SSCSTTHHHH
T ss_pred HHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhcccc-----ccccccc-cc---------cccccccccc
Confidence 9999999999999999999999999999999888776655443332 1112111 10 0123455788
Q ss_pred HHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHHH
Q 044553 157 VIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQIL 231 (275)
Q Consensus 157 ~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~l 231 (275)
.+..+...++.. ++++++||||.||+.++..+|. ++++ .+. +.+.+.... +....++.+|+++|
T Consensus 146 ~~~~~~~~~~~~-~~~~i~iGDs~nDi~m~~~ag~-~va~--na~---~~lk~~Ad~----vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 146 ILEKIAKIEGIN-LEDTVAVGDGANDISMFKKAGL-KIAF--CAK---PILKEKADI----CIEKRDLREILKYI 209 (210)
T ss_dssp HHHHHHHHHTCC-GGGEEEEESSGGGHHHHHHCSE-EEEE--SCC---HHHHTTCSE----EECSSCGGGGGGGC
T ss_pred hhhhHHHHhccc-ccceEEecCCcChHHHHHHCCC-CEEE--CCC---HHHHHhCCE----EEcCCCHHHHHHHh
Confidence 888888887665 5899999999999999976654 3333 222 333333222 33445677776654
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=99.72 E-value=7.4e-18 Score=133.74 Aligned_cols=144 Identities=14% Similarity=0.143 Sum_probs=96.3
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCH---------------HHHHHHHHHcCCcCCcceEecCCCccCCCCceee
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANL---------------FFIETILEHLGIRDCFSEINTNPGFVDEEGRLRI 132 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~---------------~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~ 132 (275)
++++++||+.++|+.|+++|++++|+||.+. ..+...+...|+. ++.++.+...
T Consensus 24 ~~~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~cp~~--------- 92 (182)
T d2gmwa1 24 DNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIYYCPHH--------- 92 (182)
T ss_dssp GGCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCB---------
T ss_pred HHeeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhccc--ccceeecccc---------
Confidence 4578999999999999999999999999863 1233333444442 2222211111
Q ss_pred cccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCC
Q 044553 133 FPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPM 212 (275)
Q Consensus 133 kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~ 212 (275)
|.. ........|.++++++..+..++.+++.. +++++||||+.+|+.+|+++|.......+.|+...+.....+
T Consensus 93 -p~~---~~~~~~~~~~~rKP~p~m~~~~~~~~~i~-~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~a- 166 (182)
T d2gmwa1 93 -PQG---SVEEFRQVCDCRKPHPGMLLSARDYLHID-MAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAA- 166 (182)
T ss_dssp -TTC---SSGGGBSCCSSSTTSCHHHHHHHHHHTBC-GGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHC-
T ss_pred -ccc---ccccccccccccCCccccccchhhhcccc-cccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCC-
Confidence 100 00111122555666778899999998876 589999999999999999988866566666665544443322
Q ss_pred ceeEEEeeCCChHHHHHHHHH
Q 044553 213 LIKAEIHEWTDGEELEQILLH 233 (275)
Q Consensus 213 ~~~~~~~~~~~~~el~~~l~~ 233 (275)
...++++.|+.++|++
T Consensus 167 -----d~v~~~l~dl~~~ikk 182 (182)
T d2gmwa1 167 -----DWVLNSLADLPQAIKK 182 (182)
T ss_dssp -----SEEESCGGGHHHHHHC
T ss_pred -----CEEECCHHHHHHHhcC
Confidence 2368999999998873
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=99.70 E-value=1.9e-18 Score=136.76 Aligned_cols=168 Identities=14% Similarity=0.168 Sum_probs=111.4
Q ss_pred EEEEEcCCcccCCccH---HHHHHHhCCChHH-----------HhhcC-CCChHHHHHHHHHHHHhCCCCHHHHHHHHh-
Q 044553 5 VVIFDFDKTIIDCDSD---NFVVDELGATDLF-----------NQLLP-TMPWNSLMDRMMKELHSQGKTIEDIVEVLK- 68 (275)
Q Consensus 5 ~viFD~DGTL~d~~~~---~~~~~~~g~~~~~-----------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 68 (275)
+++||+||||++++.. .......+.+... ..... .............. .......+.......
T Consensus 2 l~iFDlDgtL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 80 (197)
T d2b0ca1 2 LYIFDLGNVIVDIDFNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEALCHE-MALPLSYEQFSHGWQA 80 (197)
T ss_dssp EEEECCBTTTEEEETHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHTTCSCHHHHHHHHHHH-HTCCCCHHHHHHHHHT
T ss_pred EEEEeCCCCcCcCHHHHHHHHHHHHhCCCHHHHHHHHhcccHHHHHHhccccHHHHHHHHhhh-hccchhHHHHHHHHHH
Confidence 5789999999987542 2233344444211 11111 11222222222222 222333443333322
Q ss_pred -cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHc-CCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCC
Q 044553 69 -RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHL-GIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCN 146 (275)
Q Consensus 69 -~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~-gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~ 146 (275)
...+++++.+++..++.+|++++++||++.......+..+ ++..+|+.+++++... ..||.|
T Consensus 81 ~~~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~------~~Kp~~---------- 144 (197)
T d2b0ca1 81 VFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLG------MRKPEA---------- 144 (197)
T ss_dssp CEEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHT------CCTTCH----------
T ss_pred hccccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeeccccc------ccccch----------
Confidence 2468899999999999999999999998877777667765 7888999998765431 345544
Q ss_pred cCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 147 LCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 147 ~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
++++.++..++.. |++|+||||+.+|+.+|+++|+..+++.+.
T Consensus 145 ---------~~~~~~~~~~~~~-~~~~l~vgDs~~di~~A~~aG~~ti~v~~~ 187 (197)
T d2b0ca1 145 ---------RIYQHVLQAEGFS-PSDTVFFDDNADNIEGANQLGITSILVKDK 187 (197)
T ss_dssp ---------HHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEECCST
T ss_pred ---------HHHHHHHHhcCCC-CCeEEEEeCCHHHHHHHHHcCCEEEEECCC
Confidence 7788888887765 589999999999999999999877766543
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.69 E-value=9.6e-16 Score=122.29 Aligned_cols=198 Identities=15% Similarity=0.137 Sum_probs=131.8
Q ss_pred ceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHHHHH
Q 044553 3 GIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAIKS 82 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~ 82 (275)
+|+|+||+||||+++ .+..+++..|.........+...+.+.+..-+..+...+.....+......+...++....+..
T Consensus 2 mkli~fDlDGTLl~e-~~~~~a~~~Gi~~~~~tgR~~~~~~~~~~~~v~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (206)
T d1rkua_ 2 MEIACLDLEGVLVPE-IWIAFAEKTGIDALKATTRDIPDYDVLMKQRLRILDEHGLKLGDIQEVIATLKPLEGAVEFVDW 80 (206)
T ss_dssp CEEEEEESBTTTBCC-HHHHHHHHHTCGGGGCCTTTCCCHHHHHHHHHHHHHHTTCCHHHHHHHHTTCCCCTTHHHHHHH
T ss_pred cEEEEEcCccchHHH-HHHHHHHHcCCHHHHHHCCCCCCHHHHHHHHHHHHHhCCCceehhhhhhhhccccchHHHHHHH
Confidence 489999999999985 5677788889864433333345667777666666666666777777778889999999999988
Q ss_pred HHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHHHHHH
Q 044553 83 AHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQ 162 (275)
Q Consensus 83 L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~ 162 (275)
++ .+++.+++|++...........+++...+..... ....+..... .. + |....+...
T Consensus 81 ~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~-~~------------~----~~~~~~~~~ 138 (206)
T d1rkua_ 81 LR-ERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLE----IDDSDRVVGY-QL------------R----QKDPKRQSV 138 (206)
T ss_dssp HH-TTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEE----ECTTSCEEEE-EC------------C----SSSHHHHHH
T ss_pred hh-cCceEEEeccCchHHHHHHHHHhCCchhhcceee----eecccccccc-cc------------c----chhhHHHHH
Confidence 75 6799999999999999999999887655433221 1111111111 00 0 122223344
Q ss_pred HhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHHHHHH
Q 044553 163 ASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHL 234 (275)
Q Consensus 163 ~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~l~~~ 234 (275)
..++.. ++++++||||.||+.|...+| +.++-.. ..++..+.+.. ....+..||.+.|.+.
T Consensus 139 ~~~~i~-~~eviaiGDg~NDi~Ml~~Ag---~gIAmna--~~~v~~~~~~~-----~~~~~~~d~~~~~~~~ 199 (206)
T d1rkua_ 139 IAFKSL-YYRVIAAGDSYNDTTMLSEAH---AGILFHA--PENVIREFPQF-----PAVHTYEDLKREFLKA 199 (206)
T ss_dssp HHHHHT-TCEEEEEECSSTTHHHHHHSS---EEEEESC--CHHHHHHCTTS-----CEECSHHHHHHHHHHH
T ss_pred HHhccc-ccceEEecCCccCHHHHHhCC---ccEEECC--CHHHHHhCCCc-----eeecCHHHHHHHHHHH
Confidence 444444 589999999999999986644 4444322 23555554433 2578999998877754
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=99.68 E-value=1.2e-18 Score=135.54 Aligned_cols=109 Identities=17% Similarity=0.275 Sum_probs=73.7
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCC---------------HHHHHHHHHHcCCcCCcceEecCCCccCCCCceee
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDAN---------------LFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRI 132 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~---------------~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~ 132 (275)
.++.++||+.++|+.|+++|++++|+||.+ ...+...++..|+. ++.++.+.... .++....
T Consensus 27 ~~~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~i~~~~~~~-~~~~~~~ 103 (161)
T d2fpwa1 27 DKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLP-ADECDCR 103 (161)
T ss_dssp GGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCG-GGCCSSS
T ss_pred HHceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccc--cceeeeccccc-ccccccc
Confidence 457899999999999999999999999965 22345566666664 33333222111 1112234
Q ss_pred cccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 133 FPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 133 kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
||+| ..+.+++.+++.. +++++||||+.+|+.+|+++|+..+.+.+.
T Consensus 104 KP~p-------------------~~~~~~~~~~~id-~~~~~~IGD~~~Di~aA~~aG~~~i~i~~~ 150 (161)
T d2fpwa1 104 KPKV-------------------KLVERYLAEQAMD-RANSYVIGDRATDIQLAENMGINGLRYDRE 150 (161)
T ss_dssp TTSS-------------------GGGGGGC----CC-GGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred cccc-------------------HHHHHHHHhcCCC-hhcEEEECCCHHHHHHHHHcCCeEEEECCC
Confidence 7766 4455666666665 589999999999999999999987776544
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.65 E-value=1.7e-15 Score=127.85 Aligned_cols=184 Identities=20% Similarity=0.187 Sum_probs=116.1
Q ss_pred ceEEEEEcCCcccCCcc-------HHHHHHHhC-CChHHHh-------------hcCCCChHHHHHHH-------HHHHH
Q 044553 3 GIVVIFDFDKTIIDCDS-------DNFVVDELG-ATDLFNQ-------------LLPTMPWNSLMDRM-------MKELH 54 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~-------~~~~~~~~g-~~~~~~~-------------~~~~~~~~~~~~~~-------~~~~~ 54 (275)
+-.|+.||||||+..+. ...+++... .++...+ .-...+..+....+ .+.+.
T Consensus 37 klqVisDFD~Tit~~~~~~~~~~s~~~i~~~~~~~~e~~~~~~~~l~~~y~p~E~d~~~s~~ek~~~m~ew~~~~~~ll~ 116 (291)
T d2bdua1 37 KLQIITDFDMTLSRFSYNGKRCPTCHNIIDNCKLVTDECRRKLLQLKEQYYAIEVDPVLTVEEKFPYMVEWYTKSHGLLI 116 (291)
T ss_dssp GEEEEECCTTTTBCSEETTEECCCHHHHHHTSTTSCHHHHHHHHHHHHHHHHHHTCSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred hEEEEecCCCcccccccCCcccchhHHHHhhCCCCCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 34588899999998653 233455432 2322111 11123333322222 22233
Q ss_pred hCCCCHHHHHHHHh--cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceee
Q 044553 55 SQGKTIEDIVEVLK--RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRI 132 (275)
Q Consensus 55 ~~~~~~~~~~~~~~--~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~ 132 (275)
..+.+.+++.+.+. .+.+.||+.+++++|+++|++++|+|+|...+++.+++++|+..---.|++|...++.+|...+
T Consensus 117 ~~~l~~~~i~~~v~~~~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~ 196 (291)
T d2bdua1 117 EQGIPKAKLKEIVADSDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKG 196 (291)
T ss_dssp HHCCBGGGHHHHHHHSCCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEE
T ss_pred HcCCCHHHHHHHHHhcCCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEee
Confidence 34566666666654 4889999999999999999999999999999999999999985322369999998887765444
Q ss_pred cccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhh-cCCCCeEEEEcCCCCCcccccccCCCCeEee
Q 044553 133 FPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLS-KEGNKKIIYLGDGSGDYCPSLKLSEGDHVMP 197 (275)
Q Consensus 133 kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~-~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~ 197 (275)
-+.+. ....+|...+......+. ..++++++++|||.+|+.||..+...+.++.
T Consensus 197 ~~~~~-----------i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~ 251 (291)
T d2bdua1 197 FKGEL-----------IHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILK 251 (291)
T ss_dssp ECSSC-----------CCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEE
T ss_pred ccCCc-----------cccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceee
Confidence 32221 112235444433222221 1235789999999999999976555444443
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=99.64 E-value=2.8e-16 Score=127.06 Aligned_cols=116 Identities=13% Similarity=0.116 Sum_probs=78.8
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCH---------------HHHHHHHHHcCCcCCcceEecCCCccCCCCceee
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANL---------------FFIETILEHLGIRDCFSEINTNPGFVDEEGRLRI 132 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~---------------~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~ 132 (275)
.+++++||+.++|+.|+++||+++|+||.+. ..+...++..|+. ++.++.+.......
T Consensus 45 ~~~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~--~~~~~~~~~~~~~~----- 117 (209)
T d2o2xa1 45 AEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF--VDMVLACAYHEAGV----- 117 (209)
T ss_dssp GGCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCCTTCC-----
T ss_pred HHeEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccc--cceEEEeccccccc-----
Confidence 3578899999999999999999999999541 2233344445542 34444433211100
Q ss_pred cccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 133 FPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 133 kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
.+.....|.+++++..++..++..++.. +++|+||||+.+|+.+|+++|...+++..+
T Consensus 118 --------~~~~~~~~~~rKP~p~ml~~a~~~~~i~-~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g 175 (209)
T d2o2xa1 118 --------GPLAIPDHPMRKPNPGMLVEAGKRLALD-LQRSLIVGDKLADMQAGKRAGLAQGWLVDG 175 (209)
T ss_dssp --------STTCCSSCTTSTTSCHHHHHHHHHHTCC-GGGCEEEESSHHHHHHHHHTTCSEEEEETC
T ss_pred --------ccccccccccccccchhhhHhHHHhCCC-ccceEEeCCCHHHHHHHHHCCCcEEEEeCC
Confidence 0011122445555668899999888876 589999999999999999999877766543
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.56 E-value=4e-15 Score=120.22 Aligned_cols=100 Identities=9% Similarity=0.058 Sum_probs=74.4
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHH-----------HHHcCCcCCcceEecCCCccCCCCceeecccCCCC
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETI-----------LEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFT 139 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~-----------l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~ 139 (275)
.+++++.+++ ..+..+++.|+......... ++.+|+.++|+.|++++.. ..||+|
T Consensus 97 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v~~~~~~-------~~KP~p--- 162 (225)
T d2g80a1 97 PVYADAIDFI----KRKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTS-------GKKTET--- 162 (225)
T ss_dssp CCCHHHHHHH----HHCSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHH-------CCTTCH---
T ss_pred cchhhHHHHH----hhHHhhhhhhhccchhhhhhhhhhhhhHHHHHHhcCCccccceeeecccc-------CCCCCh---
Confidence 3444444444 45678889999877655444 3456888899998876432 247766
Q ss_pred CCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCc
Q 044553 140 KCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNF 201 (275)
Q Consensus 140 ~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~ 201 (275)
++++..+.+++.. |++|+||||+.+|+.+|+++|+..+++.|.|.
T Consensus 163 ----------------~~f~~~~~~lg~~-p~e~l~VgD~~~Dv~~A~~aG~~ti~v~r~g~ 207 (225)
T d2g80a1 163 ----------------QSYANILRDIGAK-ASEVLFLSDNPLELDAAAGVGIATGLASRPGN 207 (225)
T ss_dssp ----------------HHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEEECCTTS
T ss_pred ----------------hHhHHHHHhcccC-chhceeecCCHHHHHHHHHcCCEEEEEeCCCC
Confidence 6778888888776 58999999999999999999998888877653
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=99.46 E-value=1.5e-13 Score=113.72 Aligned_cols=71 Identities=13% Similarity=0.085 Sum_probs=48.4
Q ss_pred CchHHHHHHHHHhhhcCCCCeEEEEcCCC-CCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHH
Q 044553 152 MCKGVVIERIQASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEEL 227 (275)
Q Consensus 152 ~~K~~~l~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el 227 (275)
+++..+++.++.+++.. |++|+||||+. +||.+|+++|+..+++..+.....+ +...+..| ...++++.||
T Consensus 176 KP~p~~~~~a~~~lgi~-p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~-l~~~~~~p---d~i~~sl~eL 247 (250)
T d2c4na1 176 KPSPWIIRAALNKMQAH-SEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDD-IDSMPFRP---SWIYPSVAEI 247 (250)
T ss_dssp TTSTHHHHHHHHHHTCC-GGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGG-GSSCSSCC---SEEESSGGGC
T ss_pred cchhhhHhhhhhhhcCC-chheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHH-HHhCCCCC---CEEECCHHHh
Confidence 44578999999988875 58999999995 6999999999987765443333233 22222222 2256777775
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=99.40 E-value=2.5e-13 Score=112.86 Aligned_cols=77 Identities=13% Similarity=0.059 Sum_probs=55.2
Q ss_pred CCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHH
Q 044553 151 NMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQ 229 (275)
Q Consensus 151 ~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~ 229 (275)
++++..+++.++..++.. +++++||||+ .+||.+|+++|+..+++.++.+...++. ..+..| ...++++.||.+
T Consensus 184 ~KP~p~~~~~a~~~l~~~-~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~-~~~~~P---D~ii~~l~eL~~ 258 (261)
T d1vjra_ 184 GKPNPLVVDVISEKFGVP-KERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLE-RAETKP---DFVFKNLGELAK 258 (261)
T ss_dssp STTSTHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHH-HCSSCC---SEEESSHHHHHH
T ss_pred CCCcHHHHHHHHhhhccC-chhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHh-hcCCCC---CEEECCHHHHHH
Confidence 345668888999888775 5899999999 5799999999998777654434333332 222223 226799999998
Q ss_pred HHH
Q 044553 230 ILL 232 (275)
Q Consensus 230 ~l~ 232 (275)
+|+
T Consensus 259 ~l~ 261 (261)
T d1vjra_ 259 AVQ 261 (261)
T ss_dssp HHC
T ss_pred HhC
Confidence 774
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=99.34 E-value=2.7e-13 Score=103.02 Aligned_cols=130 Identities=15% Similarity=0.035 Sum_probs=75.8
Q ss_pred ceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHHHHH
Q 044553 3 GIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAIKS 82 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~ 82 (275)
+|+|+||+||||+++... ....|. .+....++|++.++|+.
T Consensus 7 pk~vifDiDgTL~~~~~~-----------------~~~~~~----------------------~~~~~~~~p~v~~~l~~ 47 (149)
T d1ltqa1 7 PKAVIFDVDGTLAKMNGR-----------------GPYDLE----------------------KCDTDVINPMVVELSKM 47 (149)
T ss_dssp CEEEEEETBTTTBCCSSC-----------------CTTCGG----------------------GGGGCCBCHHHHHHHHH
T ss_pred CcEEEEEcCCCcEeCCCC-----------------CcCCcc----------------------ccccCccCHHHHHHHHH
Confidence 689999999999998541 000111 11346789999999999
Q ss_pred HHHcCCcEEEEeCCCHHH---HHHHHHHcC-----C-cCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCc
Q 044553 83 AHALGCELRIVSDANLFF---IETILEHLG-----I-RDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMC 153 (275)
Q Consensus 83 L~~~g~~~~IvS~~~~~~---i~~~l~~~g-----l-~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~ 153 (275)
|+++|++++++||.+... +...++..+ + ...++....... +. .+| ....
T Consensus 48 l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~---------------d~~~ 105 (149)
T d1ltqa1 48 YALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQREQ-----GD--TRK---------------DDVV 105 (149)
T ss_dssp HHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECCT-----TC--CSC---------------HHHH
T ss_pred HHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcEEEeecccc-----cc--cCC---------------chHH
Confidence 999999999999986332 222222211 0 011122221111 00 000 0111
Q ss_pred hHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEee
Q 044553 154 KGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMP 197 (275)
Q Consensus 154 K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~ 197 (275)
|...++.+.. ...+.+++|||+..|+.+|+++|...+.+.
T Consensus 106 k~~~l~~~~~----~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~ 145 (149)
T d1ltqa1 106 KEEIFWKHIA----PHFDVKLAIDDRTQVVEMWRRIGVECWQVA 145 (149)
T ss_dssp HHHHHHHHTT----TTCEEEEEEECCHHHHHHHHHTTCCEEECS
T ss_pred HHHHHHHhcc----CCCceEEEEcCCHHHHHHHHHCCCcEEEeC
Confidence 3344443332 234456789999999999999888655543
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.31 E-value=2.8e-12 Score=103.94 Aligned_cols=118 Identities=18% Similarity=0.236 Sum_probs=75.3
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCC-ccCCCCceeecccC---------------
Q 044553 73 HPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPG-FVDEEGRLRIFPFH--------------- 136 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~-~~~~~g~~~~kp~~--------------- 136 (275)
.+++.++|+.|++.|++++++|+.+...++.+.+.+|+...+ +..+.. .+..++... ++..
T Consensus 22 ~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~--i~~~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 98 (225)
T d1l6ra_ 22 STKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPV--FGENGGIMFDNDGSIK-KFFSNEGTNKFLEEMSKRT 98 (225)
T ss_dssp CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCE--EEGGGTEEECTTSCEE-ESSCSHHHHHHHHHHTTTS
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceE--EeecceEEEeCCccEE-EecChHHHHHHHHHHHHhc
Confidence 355668889999999999999999988888888888876431 111111 111111110 1100
Q ss_pred CC------------------------------------CCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCC
Q 044553 137 DF------------------------------------TKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGS 180 (275)
Q Consensus 137 ~~------------------------------------~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~ 180 (275)
.. ....+.++..+.+.+|..+++.++..++.. ++++++||||.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~-~~~v~~~GDs~ 177 (225)
T d1l6ra_ 99 SMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLE-YDEILVIGDSN 177 (225)
T ss_dssp SCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCC-GGGEEEECCSG
T ss_pred CcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccc-hhheeeecCCc
Confidence 00 000001112256778999999999998876 48999999999
Q ss_pred CCcccccccCCCCeEee
Q 044553 181 GDYCPSLKLSEGDHVMP 197 (275)
Q Consensus 181 ~Di~~a~~~~~~~~~~~ 197 (275)
||+.+...+ ++.++
T Consensus 178 nD~~m~~~a---~~~va 191 (225)
T d1l6ra_ 178 NDMPMFQLP---VRKAC 191 (225)
T ss_dssp GGHHHHTSS---SEEEE
T ss_pred chHHHHHHC---CeEEE
Confidence 999988554 44444
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.30 E-value=1.2e-11 Score=99.69 Aligned_cols=154 Identities=18% Similarity=0.252 Sum_probs=90.1
Q ss_pred CCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccC----------------------------
Q 044553 74 PRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVD---------------------------- 125 (275)
Q Consensus 74 pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~---------------------------- 125 (275)
+.+.++|+.|+++|++++++|+.+...++..+...++...+ +..+...+.
T Consensus 22 ~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~--i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (230)
T d1wr8a_ 22 EKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPV--VAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPNA 99 (230)
T ss_dssp HHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCE--EEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCccc--ccccceeeeccccccccccccHHHHHHHHHHHhcccc
Confidence 45667888888899999999999888888888877765431 111000000
Q ss_pred ---------CCCceeecccC--------------C--CCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCC
Q 044553 126 ---------EEGRLRIFPFH--------------D--FTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGS 180 (275)
Q Consensus 126 ---------~~g~~~~kp~~--------------~--~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~ 180 (275)
.......+... . .....+..+.++.+..|..+++.++..++..+ +++++|||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~-~~~~~iGD~~ 178 (230)
T d1wr8a_ 100 RTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKP-KEVAHVGDGE 178 (230)
T ss_dssp CBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCG-GGEEEEECSG
T ss_pred cceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccch-hheeeeecCc
Confidence 00000000000 0 00011111224677889999999999988764 7999999999
Q ss_pred CCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHHHHHHHHHhc
Q 044553 181 GDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHLVNTIG 239 (275)
Q Consensus 181 ~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~~~ 239 (275)
||+.+...++ +.++-.+. . +-+.+.... +..-.+..-+.+.+++++.+.+
T Consensus 179 NDi~ml~~ag---~~vav~na-~-~~~k~~A~~----v~~~~~~~gv~~~i~~~l~~~g 228 (230)
T d1wr8a_ 179 NDLDAFKVVG---YKVAVAQA-P-KILKENADY----VTKKEYGEGGAEAIYHILEKFG 228 (230)
T ss_dssp GGHHHHHHSS---EEEECTTS-C-HHHHTTCSE----ECSSCHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHCC---eEEEECCC-C-HHHHHhCCE----EECCCCcCHHHHHHHHHHHHcC
Confidence 9999986654 44442221 1 223332221 2222444557888888877654
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.29 E-value=4.1e-13 Score=117.86 Aligned_cols=153 Identities=15% Similarity=0.006 Sum_probs=95.3
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcce--EecCCCcc-----CCCCceeecccCCCCCCCC
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSE--INTNPGFV-----DEEGRLRIFPFHDFTKCSH 143 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~--i~~~~~~~-----~~~g~~~~kp~~~~~~~~~ 143 (275)
+|+||+.++|+.|+++|++++++||.+...++.+++++|+.++|+. +++.+... ........||+|+.+...
T Consensus 215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~- 293 (380)
T d1qyia_ 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAA- 293 (380)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHH-
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHH-
Confidence 4667999999999999999999999999999999999999999873 55443321 011223457766300000
Q ss_pred CCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCc--h-hhHHHhhCCCceeEEEee
Q 044553 144 GCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNF--P-LWDLIIRNPMLIKAEIHE 220 (275)
Q Consensus 144 ~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~--~-~~~l~~~~~~~~~~~~~~ 220 (275)
+.....+..........+.. .+++|+|||||.+|+.+|+++|...+++..+.. . ..++..... ...
T Consensus 294 ----~~~~~~~~~~k~~iv~~~~~-~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~A------D~i 362 (380)
T d1qyia_ 294 ----LYGNNRDKYESYINKQDNIV-NKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHA------DYV 362 (380)
T ss_dssp ----HHCCCGGGHHHHHHCCTTCS-CTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTC------SEE
T ss_pred ----HHHcCCCHHHHHHHHHHhCC-CCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCC------CEE
Confidence 00000001111111111222 257899999999999999998876666653321 1 122222222 225
Q ss_pred CCChHHHHHHHHHHH
Q 044553 221 WTDGEELEQILLHLV 235 (275)
Q Consensus 221 ~~~~~el~~~l~~~~ 235 (275)
++++.||..+|.+++
T Consensus 363 i~~~~el~~il~~l~ 377 (380)
T d1qyia_ 363 INHLGELRGVLDNLL 377 (380)
T ss_dssp ESSGGGHHHHHSCTT
T ss_pred ECCHHHHHHHHHHHH
Confidence 799999998887654
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=99.24 E-value=2.8e-12 Score=106.11 Aligned_cols=69 Identities=13% Similarity=0.110 Sum_probs=47.0
Q ss_pred hHHHHHHHHHhhhcCCCCeEEEEcCCC-CCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHH
Q 044553 154 KGVVIERIQASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEEL 227 (275)
Q Consensus 154 K~~~l~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el 227 (275)
-..+++.++.+.+.. |++|+||||+. +||.+|+++|+..+++..+.++..++. .....| ...++++.|+
T Consensus 182 ~p~~~~~al~~l~i~-~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~-~~~~~P---D~vi~sl~e~ 251 (253)
T d1wvia_ 182 EAVIMNKALDRLGVK-RHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVP-ALPIQP---DFVLSSLAEW 251 (253)
T ss_dssp SHHHHHHHHHHHTSC-GGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGG-GCSSCC---SEEESCGGGC
T ss_pred Ccccceehhhhcccc-ccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHh-hcCCCC---CEEECCHHHc
Confidence 368899999988875 58999999995 599999999997777654433333322 212122 1256777664
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.18 E-value=2.1e-11 Score=101.11 Aligned_cols=67 Identities=21% Similarity=0.218 Sum_probs=55.4
Q ss_pred CCceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHHH
Q 044553 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAI 80 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L 80 (275)
|.+|+|+||+||||++.+. .+.|.+.++|
T Consensus 2 ~~iKli~~DlDGTL~~~~~---------------------------------------------------~i~~~~~~al 30 (271)
T d1rkqa_ 2 LAIKLIAIDMDGTLLLPDH---------------------------------------------------TISPAVKNAI 30 (271)
T ss_dssp CCCCEEEECCCCCCSCTTS---------------------------------------------------CCCHHHHHHH
T ss_pred CCeeEEEEeCCccccCCCC---------------------------------------------------ccCHHHHHHH
Confidence 8899999999999987631 1346667889
Q ss_pred HHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEe
Q 044553 81 KSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEIN 118 (275)
Q Consensus 81 ~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~ 118 (275)
++|+++|++++++|+++...+..+++.+++...++.++
T Consensus 31 ~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i 68 (271)
T d1rkqa_ 31 AAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCI 68 (271)
T ss_dssp HHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEE
T ss_pred HHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEE
Confidence 99999999999999999999999999998876555444
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.11 E-value=5.6e-11 Score=97.94 Aligned_cols=46 Identities=22% Similarity=0.341 Sum_probs=37.7
Q ss_pred CCchHHHHHHHHHhhhcCCCCeEEEEcCCC-CCcccccccCCCCeEee
Q 044553 151 NMCKGVVIERIQASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMP 197 (275)
Q Consensus 151 ~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~ 197 (275)
+++++.+++.++..++.. |++|+||||+. +||.+|+++|+..+++.
T Consensus 179 ~KP~~~~~~~~~~~~gi~-~~~~l~IGD~~~~DI~~a~~aG~~si~V~ 225 (253)
T d1yv9a1 179 GKPKAIIMERAIAHLGVE-KEQVIMVGDNYETDIQSGIQNGIDSLLVT 225 (253)
T ss_dssp STTSHHHHHHHHHHHCSC-GGGEEEEESCTTTHHHHHHHHTCEEEEET
T ss_pred cccchhHHHHHHHHhCCC-ccceEEecCChHHHHHHHHHCCCCEEEEC
Confidence 455678889999888875 58999999995 69999999998766553
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.10 E-value=3e-10 Score=92.09 Aligned_cols=37 Identities=19% Similarity=0.188 Sum_probs=33.5
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcC
Q 044553 76 VVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRD 112 (275)
Q Consensus 76 ~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~ 112 (275)
..+.|+.|+++|+.++++|+.+...+..+++.+++..
T Consensus 22 ~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~ 58 (243)
T d1wzca1 22 AKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58 (243)
T ss_dssp GHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence 4578999999999999999999999999999998864
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.08 E-value=8.8e-11 Score=97.91 Aligned_cols=40 Identities=25% Similarity=0.341 Sum_probs=35.3
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcC
Q 044553 73 HPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRD 112 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~ 112 (275)
.+.+.+.|++|+++|++++++|+++...+..+++.+++..
T Consensus 20 ~~~~~~~l~~l~~~Gi~~~i~TGR~~~~~~~~~~~l~~~~ 59 (285)
T d1nrwa_ 20 SLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKT 59 (285)
T ss_dssp CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCCC
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCc
Confidence 4667789999999999999999999999999999998864
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.04 E-value=1.5e-10 Score=95.83 Aligned_cols=77 Identities=12% Similarity=0.088 Sum_probs=51.1
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChH--
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGE-- 225 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-- 225 (275)
.+.+..|..+++.++..+++. ++++++||||.||+.|... ++..++-.+. ..++.+. .. + .-.+..
T Consensus 185 ~p~~~sK~~al~~l~~~lgi~-~~~vi~~GD~~ND~~Ml~~---ag~~vam~Na-~~~lk~~-A~-----~-v~~~~~~~ 252 (269)
T d1rlma_ 185 IIPGLHKANGISRLLKRWDLS-PQNVVAIGDSGNDAEMLKM---ARYSFAMGNA-AENIKQI-AR-----Y-ATDDNNHE 252 (269)
T ss_dssp ECTTCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHH---CSEEEECTTC-CHHHHHH-CS-----E-ECCCGGGT
T ss_pred ecCchHHHHHHHHHhhhhccc-cccEEEEcCCcchHHHHHh---CCeEEEeCCC-CHHHHHh-CC-----E-EcCCCCcc
Confidence 466778999999999999876 4899999999999998844 4556554332 1233222 11 1 123322
Q ss_pred HHHHHHHHHHH
Q 044553 226 ELEQILLHLVN 236 (275)
Q Consensus 226 el~~~l~~~~~ 236 (275)
-+...|+++++
T Consensus 253 Gva~~i~~~l~ 263 (269)
T d1rlma_ 253 GALNVIQAVLD 263 (269)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 27777777775
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.99 E-value=1.7e-09 Score=86.61 Aligned_cols=40 Identities=10% Similarity=0.125 Sum_probs=36.3
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcC
Q 044553 73 HPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRD 112 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~ 112 (275)
.+.+.++|+.|+++|++++++|+.+...+...++.+++..
T Consensus 23 ~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~ 62 (232)
T d1xvia_ 23 WQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG 62 (232)
T ss_dssp CCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccCC
Confidence 4677899999999999999999999999999999999864
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.92 E-value=4e-10 Score=92.89 Aligned_cols=42 Identities=17% Similarity=0.170 Sum_probs=35.6
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccC
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLS 190 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~ 190 (275)
.+.+.+|..+++.+++.++.. ++++++||||.||+.|...++
T Consensus 181 ~p~~~sK~~al~~l~~~~~i~-~~~~~a~GD~~ND~~Ml~~a~ 222 (260)
T d2rbka1 181 TAKGDTKQKGIDEIIRHFGIK-LEETMSFGDGGNDISMLRHAA 222 (260)
T ss_dssp ESTTCSHHHHHHHHHHHHTCC-GGGEEEEECSGGGHHHHHHSS
T ss_pred EeCCCCHHHHHHHHHHhcccc-HhheeEecCCcccHHHHHhCC
Confidence 467788999999999998876 479999999999999885543
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.89 E-value=6.1e-10 Score=90.80 Aligned_cols=46 Identities=20% Similarity=0.185 Sum_probs=37.1
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeec
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPR 198 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~ 198 (275)
+.+.+|..+++.++..++.. +++++++|||.||+.+... ++..++-
T Consensus 158 ~~~~~K~~a~~~l~~~~gi~-~~~~v~~GD~~ND~~Ml~~---~~~~vav 203 (244)
T d1s2oa1 158 PQRSNKGNATQYLQQHLAME-PSQTLVCGDSGNDIGLFET---SARGVIV 203 (244)
T ss_dssp ETTCSHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHTS---SSEEEEC
T ss_pred eCccchhHHHHHHHHhccCC-hhhEEEEcCCCCCHHHHhh---CCcEEEe
Confidence 56778999999999998875 4789999999999988844 4445443
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.84 E-value=1.4e-09 Score=85.58 Aligned_cols=82 Identities=17% Similarity=0.277 Sum_probs=54.1
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCC--------H----HHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCC
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDAN--------L----FFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFT 139 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~--------~----~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~ 139 (275)
++|++.+.|+.|+++||.++|+||.+ . ..+..+++.++.. +...+|...
T Consensus 51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~l~~~--~~i~~~~~~----------------- 111 (195)
T d1yj5a1 51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVATHA----------------- 111 (195)
T ss_dssp SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHHHTSC--CEEEEECSS-----------------
T ss_pred ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHHcCCC--ccEEEecCc-----------------
Confidence 47999999999999999999999953 2 2245566666653 222222111
Q ss_pred CCCCCCCcCCCCCchHHHHHHHHHhhhc---CCCCeEEEEcCCC
Q 044553 140 KCSHGCNLCPPNMCKGVVIERIQASLSK---EGNKKIIYLGDGS 180 (275)
Q Consensus 140 ~~~~~~~~~~~~~~K~~~l~~~~~~~~~---~~~~~~i~vGDs~ 180 (275)
|.+++++..++..+...++. ...++++||||..
T Consensus 112 --------~~~RKP~~GM~~~~~~~~n~~~~id~~~S~~IGD~~ 147 (195)
T d1yj5a1 112 --------GLNRKPVSGMWDHLQEQANEGIPISVEDSVFVGDAA 147 (195)
T ss_dssp --------SSSSTTSTHHHHHHHHTSSSSCCCCGGGCEEECSCC
T ss_pred --------cccCCCccHHHHHHHHHhcccccCCcCceEEEeCcc
Confidence 12233355788888877641 2247899999964
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.81 E-value=3.2e-09 Score=87.84 Aligned_cols=46 Identities=13% Similarity=0.065 Sum_probs=36.9
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEee
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMP 197 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~ 197 (275)
.+.+..|...++.++..++.. +++++++|||.||+.+... ++..++
T Consensus 202 ~~~~~~K~~~l~~l~~~~~i~-~~~vi~~GD~~ND~~Ml~~---a~~~va 247 (283)
T d2b30a1 202 TKLGHDKYTGINYLLKHYNIS-NDQVLVVGDAENDIAMLSN---FKYSFA 247 (283)
T ss_dssp EETTCCHHHHHHHHHHHTTCC-GGGEEEEECSGGGHHHHHS---CSEEEE
T ss_pred cCCcchhHHHHHHHhhhcccc-cceEEEecCChhhHHHHHh---CCcEEE
Confidence 355678999999999988766 4799999999999998844 455554
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.72 E-value=9.4e-09 Score=84.78 Aligned_cols=48 Identities=19% Similarity=0.307 Sum_probs=38.9
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
.+.+..|..+++.++..+++. ++++++||||.||+.+.. .+++.++-.
T Consensus 185 ~~~~~~K~~ai~~l~~~~~i~-~~~vva~GD~~ND~~ml~---~~~~sva~~ 232 (267)
T d1nf2a_ 185 VPKNVDKGKALRFLRERMNWK-KEEIVVFGDNENDLFMFE---EAGLRVAME 232 (267)
T ss_dssp ECTTCCHHHHHHHHHHHHTCC-GGGEEEEECSHHHHHHHT---TCSEEEECT
T ss_pred cCCCCchhHHHHHHHHhhccC-cccEEEEcCCcchHHHHH---hCCcEEEeC
Confidence 467788999999999998876 479999999999999884 455566543
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=98.68 E-value=5.8e-09 Score=82.38 Aligned_cols=95 Identities=14% Similarity=0.073 Sum_probs=62.7
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHH---HHHHHH-HHcCCcCC--cceEecCCCccCCCCceeecccCCCCCCCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLF---FIETIL-EHLGIRDC--FSEINTNPGFVDEEGRLRIFPFHDFTKCSH 143 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~---~i~~~l-~~~gl~~~--fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~ 143 (275)
..+.||+.++++.++++|++++.|||.... ....-| +.+|+... .+.++..+ ++..
T Consensus 85 A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~-----------~~~K------- 146 (209)
T d2b82a1 85 SIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGD-----------KPGQ------- 146 (209)
T ss_dssp CEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCC-----------CTTC-------
T ss_pred cCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCC-----------CCCc-------
Confidence 567899999999999999999999997533 333444 45787422 11222211 1111
Q ss_pred CCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 144 GCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 144 ~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
..|...|++ + .-++++||..+|+.+|..+|..++.+.|.
T Consensus 147 --------~~rr~~Ik~----y-----~I~l~~GD~l~Df~aA~eagi~~iRi~r~ 185 (209)
T d2b82a1 147 --------NTKSQWLQD----K-----NIRIFYGDSDNDITAARDVGARGIRILRA 185 (209)
T ss_dssp --------CCSHHHHHH----T-----TEEEEEESSHHHHHHHHHTTCEEEECCCC
T ss_pred --------hHHHHHHHH----c-----CeEEEecCCHHHHhHHHHcCCCceEeecc
Confidence 113444432 3 35789999999999998888877776654
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.62 E-value=2.5e-08 Score=79.44 Aligned_cols=67 Identities=19% Similarity=0.230 Sum_probs=45.9
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHH
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELE 228 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~ 228 (275)
+.+..|..+++.++.. ++++++|||.||+.|-..++. +++++-+.. + ..|.+ ..++..|+.
T Consensus 155 p~g~~Kg~al~~l~~~------~~~i~~GDs~ND~~Mf~~~~~-~~av~~g~~---------~--~~A~~-~~~~~~ev~ 215 (229)
T d1u02a_ 155 VPGVNKGSAIRSVRGE------RPAIIAGDDATDEAAFEANDD-ALTIKVGEG---------E--THAKF-HVADYIEMR 215 (229)
T ss_dssp CTTCCHHHHHHHHHTT------SCEEEEESSHHHHHHHHTTTT-SEEEEESSS---------C--CCCSE-EESSHHHHH
T ss_pred cCCCCHHHHHHHHhcc------ccceeecCCCChHHHHhccCC-eEEEEeCCC---------C--ccCeE-EcCCHHHHH
Confidence 6788899999999753 589999999999987754443 555543321 0 12212 457888887
Q ss_pred HHHHHH
Q 044553 229 QILLHL 234 (275)
Q Consensus 229 ~~l~~~ 234 (275)
++|+.+
T Consensus 216 ~~l~~l 221 (229)
T d1u02a_ 216 KILKFI 221 (229)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777654
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.59 E-value=5.3e-08 Score=71.95 Aligned_cols=87 Identities=18% Similarity=0.323 Sum_probs=66.1
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCC
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPP 150 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~ 150 (275)
++.|++.+.++.|++.|++++++|+.....+..+.+.+|++ .+++.- .|
T Consensus 21 ~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~----~v~~~~-----------~p---------------- 69 (135)
T d2b8ea1 21 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----LVIAEV-----------LP---------------- 69 (135)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS----EEECSC-----------CH----------------
T ss_pred CCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh----hhcccc-----------ch----------------
Confidence 46899999999999999999999999999999999999985 333211 11
Q ss_pred CCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeec
Q 044553 151 NMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPR 198 (275)
Q Consensus 151 ~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~ 198 (275)
..|...++++... ..+.|+||+.||..+.+. +++.++-
T Consensus 70 -~~k~~~v~~~q~~------~~v~~vGDg~nD~~aL~~---Advgia~ 107 (135)
T d2b8ea1 70 -HQKSEEVKKLQAK------EVVAFVGDGINDAPALAQ---ADLGIAV 107 (135)
T ss_dssp -HHHHHHHHHHTTT------SCEEEEECSSSSHHHHHH---SSEEEEE
T ss_pred -hHHHHHHHHHHcC------CEEEEEeCCCCcHHHHHh---CCeeeec
Confidence 1166777665432 578999999999987644 4555553
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.55 E-value=6.7e-09 Score=83.49 Aligned_cols=38 Identities=24% Similarity=0.364 Sum_probs=28.4
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcC----CCCCcccccccC
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGD----GSGDYCPSLKLS 190 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGD----s~~Di~~a~~~~ 190 (275)
+.+..|..+++.++. . .++++++||| |.||+.+...+|
T Consensus 181 ~~~vsKg~al~~l~~---~-~~~ev~afGD~~~~g~NDi~Ml~~~g 222 (243)
T d2amya1 181 PDGWDKRYCLRHVEN---D-GYKTIYFFGDKTMPGGNDHEIFTDPR 222 (243)
T ss_dssp ETTCSGGGGGGGTTT---S-CCSEEEEEECSCC---CCCHHHHCTT
T ss_pred ccccCHHHHHHHHhC---C-CcceEEEEcCCCCCCCCcHHHHHccC
Confidence 677889999988753 2 3589999999 779998875543
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.47 E-value=1.1e-07 Score=73.62 Aligned_cols=81 Identities=15% Similarity=0.149 Sum_probs=62.4
Q ss_pred HHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHH
Q 044553 79 AIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVI 158 (275)
Q Consensus 79 ~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l 158 (275)
.+..|+..|+.++++|+.....+....+.+++.. ++... ..|...+
T Consensus 40 gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~----~~~~~------------------------------~~K~~~l 85 (177)
T d1k1ea_ 40 GIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL----FFLGK------------------------------LEKETAC 85 (177)
T ss_dssp HHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE----EEESC------------------------------SCHHHHH
T ss_pred HHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc----ccccc------------------------------ccHHHHH
Confidence 5788889999999999998889999999888742 22110 1277888
Q ss_pred HHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEee
Q 044553 159 ERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMP 197 (275)
Q Consensus 159 ~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~ 197 (275)
+.++.+++.. +++|+||||+.+|+.+-.. +++.++
T Consensus 86 ~~~~~~~~i~-~~~v~~vGDd~nDl~~l~~---~g~sia 120 (177)
T d1k1ea_ 86 FDLMKQAGVT-AEQTAYIGDDSVDLPAFAA---CGTSFA 120 (177)
T ss_dssp HHHHHHHTCC-GGGEEEEECSGGGHHHHHH---SSEEEE
T ss_pred HHHHHHhcCC-cceeEEecCCccHHHHHhh---CCeEEE
Confidence 9999888776 5899999999999977644 344444
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.36 E-value=1.7e-07 Score=74.76 Aligned_cols=39 Identities=13% Similarity=0.230 Sum_probs=31.1
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCC----CCCcccccccC
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDG----SGDYCPSLKLS 190 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs----~~Di~~a~~~~ 190 (275)
.+.+..|..+++.++.. ++++++++||+ .||+.+-..+|
T Consensus 180 ~~~~vsKg~al~~L~~~----~~~ev~afGD~~~~G~ND~eml~~a~ 222 (244)
T d2fuea1 180 FPEGWDKRYCLDSLDQD----SFDTIHFFGNETSPGGNDFEIFADPR 222 (244)
T ss_dssp EETTCSTTHHHHHHTTS----CCSEEEEEESCCSTTSTTHHHHHSTT
T ss_pred cchhccHHHHHHHHhcC----ChhhEEEEcCCCCCCCCcHHHHHcCC
Confidence 46788999999988752 36899999996 59998875544
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=98.24 E-value=1.3e-06 Score=63.04 Aligned_cols=48 Identities=25% Similarity=0.371 Sum_probs=39.3
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCC---------------HHHHHHHHHHcCCcCCcceEe
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDAN---------------LFFIETILEHLGIRDCFSEIN 118 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~---------------~~~i~~~l~~~gl~~~fd~i~ 118 (275)
...|.+++.+.|..|++.|+.+.|.|+.. .......|+..|+. ||.++
T Consensus 22 ~~~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~gI~--Yd~Li 84 (124)
T d1xpja_ 22 NVLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQVP--YDEIL 84 (124)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTCC--CSEEE
T ss_pred ccCcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHHcCCC--ceEEE
Confidence 45789999999999999999999999874 24577778888984 46666
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.23 E-value=3.8e-06 Score=64.12 Aligned_cols=140 Identities=14% Similarity=0.074 Sum_probs=81.8
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceE----ecCCCccCCC--CceeecccCCCCCCCCC
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEI----NTNPGFVDEE--GRLRIFPFHDFTKCSHG 144 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i----~~~~~~~~~~--g~~~~kp~~~~~~~~~~ 144 (275)
+|.|++.++|+.|++.|+++.++|+.....+..+.+++|+...-..+ +......... ......+....+..
T Consensus 20 p~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar--- 96 (168)
T d1wpga2 20 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFAR--- 96 (168)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEES---
T ss_pred CCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhc---
Confidence 57899999999999999999999999999999999999985332111 1100000000 00000000000000
Q ss_pred CCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC-CchhhHHHhhCCCceeEEEeeCCC
Q 044553 145 CNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK-NFPLWDLIIRNPMLIKAEIHEWTD 223 (275)
Q Consensus 145 ~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~ 223 (275)
+ ....|..+++.+... + ..+.|+||+.||..+-+. +++.++-. +. +...+.... +..=++
T Consensus 97 ---~-~p~~K~~lv~~l~~~----g-~~Va~vGDG~nD~~AL~~---AdvGIa~~~gt---~~a~~aAdi----vl~~~~ 157 (168)
T d1wpga2 97 ---V-EPSHKSKIVEYLQSY----D-EITAMTGDGVNDAPALKK---AEIGIAMGSGT---AVAKTASEM----VLADDN 157 (168)
T ss_dssp ---C-CHHHHHHHHHHHHHT----T-CCEEEEECSGGGHHHHHH---SSEEEEETTSC---HHHHHTCSE----EETTCC
T ss_pred ---c-chhHHHHHHHHHHhc----c-cceeEEecCCCCHHHHHh---CCEEEEecccc---HHHHHhCCE----EEccCC
Confidence 0 011278888887764 2 579999999999976644 55665533 22 333332221 222256
Q ss_pred hHHHHHHHH
Q 044553 224 GEELEQILL 232 (275)
Q Consensus 224 ~~el~~~l~ 232 (275)
|..+.+.++
T Consensus 158 l~~v~~~I~ 166 (168)
T d1wpga2 158 FSTIVAAVE 166 (168)
T ss_dssp THHHHHHHH
T ss_pred HHHHHHHHH
Confidence 877777665
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.82 E-value=1.6e-05 Score=61.85 Aligned_cols=32 Identities=19% Similarity=0.235 Sum_probs=26.6
Q ss_pred HHhcCCCCCCHHHHHHHHHHcC-CcEEEEeCCC
Q 044553 66 VLKRIPIHPRVVPAIKSAHALG-CELRIVSDAN 97 (275)
Q Consensus 66 ~~~~~~~~pg~~e~L~~L~~~g-~~~~IvS~~~ 97 (275)
++..++|+||+.++++.|++.| +.+.++|+.+
T Consensus 69 ff~~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~ 101 (195)
T d1q92a_ 69 FFFELEPLPGAVEAVKEMASLQNTDVFICTSPI 101 (195)
T ss_dssp TTTTCCBCTTHHHHHHHHHHSTTEEEEEEECCC
T ss_pred HHhhCCcccCHHHHHHHHhhccCccceEEcccc
Confidence 3467899999999999999865 5788888865
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=97.77 E-value=2.5e-05 Score=56.01 Aligned_cols=47 Identities=17% Similarity=0.031 Sum_probs=36.0
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHH---HHHHHHcCCcCCcceEe
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFI---ETILEHLGIRDCFSEIN 118 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i---~~~l~~~gl~~~fd~i~ 118 (275)
..|.|++.++|+.|+++|+.+++.|+...... ...|++.|+. |+.+.
T Consensus 20 ~kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~i~--yd~i~ 69 (122)
T d2obba1 20 GEEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE--FYAAN 69 (122)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC--CSEES
T ss_pred ccccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHcCCC--ceehh
Confidence 35789999999999999999999999876554 4455556664 45553
|
| >d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5' nucleotidase-like domain: Cytosolic IMP-GMP specific 5'-nucleotidase species: Legionella pneumophila [TaxId: 446]
Probab=97.40 E-value=7.1e-05 Score=65.21 Aligned_cols=116 Identities=16% Similarity=0.151 Sum_probs=74.7
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHH-c--------CCcCCcceEecCCCc-------------cCCCC
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEH-L--------GIRDCFSEINTNPGF-------------VDEEG 128 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~-~--------gl~~~fd~i~~~~~~-------------~~~~g 128 (275)
..-|.+..+|..|++.|-++.++||+.-.++..+++. + .+.++||.||+.... ....|
T Consensus 185 ~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~KP~FF~~~~~~~~v~~~~g 264 (458)
T d2bdea1 185 IREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPENG 264 (458)
T ss_dssp ECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCHHHHHHSCCCEEEECTTTC
T ss_pred cCChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCCCCCccCCCCcceEEeCCCC
Confidence 3568899999999999999999999999999988886 4 566799998875431 11122
Q ss_pred ceeecccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccc-cccCCCCeEeec
Q 044553 129 RLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPS-LKLSEGDHVMPR 198 (275)
Q Consensus 129 ~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a-~~~~~~~~~~~~ 198 (275)
.+. +.... .. -.+...| -...+.+++ +..+ .+++||||+ ..||..+ +..||..++++.
T Consensus 265 ~l~-~~~~~--~~---~~vY~gG--n~~~l~~ll---g~~g-~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~ 324 (458)
T d2bdea1 265 TMT-NVHGP--IV---PGVYQGG--NAKKFTEDL---GVGG-DEILYIGDHIYGDILRLKKDCNWRTALVVE 324 (458)
T ss_dssp CEE-ECCSC--CC---SEEEEEC--CHHHHHHHT---TCCG-GGEEEEESSCCSCHHHHHHHHCSEEEEECT
T ss_pred ccc-cCCcc--cc---CCccccC--CHHHHHHHh---CCCC-CcEEEECCccchhhhhhhhhcCCceEEehH
Confidence 221 11000 00 0010111 134444444 3444 599999999 6898655 456888777764
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.20 E-value=1.7e-05 Score=61.06 Aligned_cols=51 Identities=12% Similarity=0.120 Sum_probs=43.7
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNP 121 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~ 121 (275)
+...||+.+||+++.+. +.++|-|++...+++.+++.+.-...|...+..+
T Consensus 54 v~~RP~l~eFL~~l~~~-yei~I~Ta~~~~YA~~il~~ldp~~~~~~~~~r~ 104 (181)
T d1ta0a_ 54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGAFRARLFRE 104 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCSSCCEEEEECGG
T ss_pred EecCCCHHHHHHHHHhc-eEEEEEcCCcHHHHHHHHHHhccCCceeEEEEee
Confidence 55789999999999987 9999999999999999999998776666555443
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.69 E-value=0.0046 Score=48.70 Aligned_cols=188 Identities=12% Similarity=0.050 Sum_probs=110.7
Q ss_pred EEEEcCCcccCCccHHHHHHHhCCC-hH----------HHhhcC--CCChHHHHHHHHHHHHhCCCCHHHHHHHHh-cCC
Q 044553 6 VIFDFDKTIIDCDSDNFVVDELGAT-DL----------FNQLLP--TMPWNSLMDRMMKELHSQGKTIEDIVEVLK-RIP 71 (275)
Q Consensus 6 viFD~DGTL~d~~~~~~~~~~~g~~-~~----------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 71 (275)
.++||.|.|.-.+..-.++..+--. .+ .....+ +..-..-+.-++..+...+.+.+.+.++.+ .+.
T Consensus 2 fvtDcEGPlslnDnA~E~~a~~~~~grfF~~lS~yDD~L~~E~~reGY~aG~TLKLIvPFl~a~Gvt~edL~~fSE~~~~ 81 (308)
T d1y8aa1 2 FFTDWEGPWILTDFALELCMAVFNNARFFSNLSEYDDYLAYEVRREGYEAGYTLKLLTPFLAAAGVKNRDVERIAELSAK 81 (308)
T ss_dssp EEECSBTTTBCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCCTTCCTTTHHHHHHHHHHHTTCCHHHHHHHHHHHCC
T ss_pred ceeccCCCCcccccHHHHHHhcCCCcchhhhhhhhhhHHHHHhhccCCCCccchhhHHHHHHHhCCCHHHHHHHhhhcee
Confidence 6899999999887654333322111 11 111111 222234455556666667888888888776 699
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCc---ee----eccc----CC---
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGR---LR----IFPF----HD--- 137 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~---~~----~kp~----~~--- 137 (275)
+.||+.++|+.+++. .+.+|+|-+..++++++...+|+. +. +++.+...+.-.. .+ .+-+ ++
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp--~e-~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~ee 157 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVR--GE-LHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEE 157 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCC--SE-EEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHH
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCC--ce-eecccccccccCCChHHHHHHHHHhhhccCccHHH
Confidence 999999999999886 899999999999999999999985 22 5554443321000 00 0000 00
Q ss_pred -------CCCCC---CCC-CcCC-CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC-CCeEeecCC
Q 044553 138 -------FTKCS---HGC-NLCP-PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE-GDHVMPRKN 200 (275)
Q Consensus 138 -------~~~~~---~~~-~~~~-~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~-~~~~~~~~~ 200 (275)
+++.. --+ ++=+ .+..|..+++......+.. ..+|||||.+|+.+.+.++. .+++++-.|
T Consensus 158 l~e~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~---~~~~VGDSITDve~Lr~~r~~gGlaIsFNG 230 (308)
T d1y8aa1 158 LFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGID---FPVVVGDSISDYKMFEAARGLGGVAIAFNG 230 (308)
T ss_dssp HHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCS---SCEEEECSGGGHHHHHHHHHTTCEEEEESC
T ss_pred HHHHHHHHhccchHhhHHhhhcccCCchhHHHHHhhcccccCC---cceeccCccccHHHHHHHhcCCCeeEEecC
Confidence 00000 000 0001 2244777777777655543 34999999999966644333 355544333
|