Citrus Sinensis ID: 044635
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 831 | 2.2.26 [Sep-21-2011] | |||||||
| Q94AH8 | 860 | Alpha,alpha-trehalose-pho | yes | no | 0.991 | 0.958 | 0.805 | 0.0 | |
| O23617 | 862 | Alpha,alpha-trehalose-pho | no | no | 0.983 | 0.947 | 0.724 | 0.0 | |
| Q9LMI0 | 851 | Probable alpha,alpha-treh | no | no | 0.980 | 0.957 | 0.639 | 0.0 | |
| Q9LRA7 | 867 | Probable alpha,alpha-treh | no | no | 0.992 | 0.951 | 0.622 | 0.0 | |
| Q0WUI9 | 856 | Probable alpha,alpha-treh | no | no | 0.980 | 0.952 | 0.622 | 0.0 | |
| O80738 | 861 | Probable alpha,alpha-treh | no | no | 0.978 | 0.944 | 0.612 | 0.0 | |
| Q9ZV48 | 862 | Probable alpha,alpha-treh | no | no | 0.972 | 0.937 | 0.564 | 0.0 | |
| Q54K57 | 733 | Alpha,alpha-trehalose-pho | yes | no | 0.845 | 0.959 | 0.333 | 1e-129 | |
| Q9FZ57 | 822 | Probable alpha,alpha-treh | no | no | 0.885 | 0.895 | 0.357 | 1e-122 | |
| Q54NU9 | 790 | Alpha,alpha-trehalose-pho | no | no | 0.815 | 0.858 | 0.329 | 1e-119 |
| >sp|Q94AH8|TPS6_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 OS=Arabidopsis thaliana GN=TPS6 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 1455 bits (3766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 698/867 (80%), Positives = 767/867 (88%), Gaps = 43/867 (4%)
Query: 1 MVSKSYSNLLELASGEAPSFGRMRRRIPRIMTVAGIISDLDDDPADSVCSDPSSSSVQRD 60
MVS+SYSNLLELASG++P+FGRM R+IPRIM VAGI+S++D+D D+ S +D
Sbjct: 1 MVSRSYSNLLELASGDSPTFGRMNRQIPRIMAVAGIMSNIDNDSKDTDLS-------PKD 53
Query: 61 RIIIVANQLPIRAQRKSDNS------------KGWIFSWDENSLLLQLKDGLGDDDIEVI 108
RIIIVAN+LPIRAQR+ D + KGW FSWDENSLLLQLKDGLGD+ IEVI
Sbjct: 54 RIIIVANELPIRAQRRVDGNGSGSSSSSTCCSKGWNFSWDENSLLLQLKDGLGDEAIEVI 113
Query: 109 YVGCLKEEIHVNEQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLS 168
YVGCLKEEI +NEQ+EV QILL++FKCVPTFLP DL++RYYHGFCKQQLWPLFHYMLPLS
Sbjct: 114 YVGCLKEEIPLNEQEEVYQILLESFKCVPTFLPLDLYTRYYHGFCKQQLWPLFHYMLPLS 173
Query: 169 PDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKL 228
PDLGGRF+R+LWQAYVSVNKIFADRIMEVINPEDDFVW+HDYHLMVLPTFLRKRFNRVKL
Sbjct: 174 PDLGGRFDRTLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKL 233
Query: 229 GFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKR 288
GFFLHSPFPSSEIYKTLPIREE+LRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKR
Sbjct: 234 GFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKR 293
Query: 289 GYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDM 348
GYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLP TE KV ELI+++ +G+ MLLGVDDM
Sbjct: 294 GYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETERKVGELIERYGRKGRTMLLGVDDM 353
Query: 349 DIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQT 408
DIFKGI+LKLLAMEQLL+QHPEWQGKVVLVQIANPARG+GKDVKE+QAETYSTV+RIN+T
Sbjct: 354 DIFKGITLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEMQAETYSTVKRINET 413
Query: 409 FGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDG--------------------- 447
FG+PGYDP+VLID PLKFYER+AYYVVAECCLVTAVRDG
Sbjct: 414 FGRPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIVSRQGNEKLDKI 473
Query: 448 ---SEPSSPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHE 504
+ KKSMLVVSEFIGCSPSLSGAIRVNPWN+DAV+DAMDSALE+A+ EKQLRHE
Sbjct: 474 LKLEANNRNKKSMLVVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALEVAEPEKQLRHE 533
Query: 505 KHYRYVSTHDVGYWARSFLQDLERTCREHVRQRCWGIGFGLSFRVVALDPNFKKLSMEHI 564
KHY+YVSTHDVGYWARSFLQDLER+C EH R+RCWGIGFGLSFRVVALD +F+KLSMEHI
Sbjct: 534 KHYKYVSTHDVGYWARSFLQDLERSCGEHGRRRCWGIGFGLSFRVVALDQSFRKLSMEHI 593
Query: 565 VSAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTL 624
VSAYKRT TRAILLDYD TLMPQ SIDK P+SK+IDILN+LCRDK N+VF+VSAKSR+TL
Sbjct: 594 VSAYKRTKTRAILLDYDDTLMPQGSIDKRPSSKSIDILNTLCRDKGNLVFIVSAKSRETL 653
Query: 625 AEWFSPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIE 684
++WFSPCE LGIAAEHGYF RLR+ EWE C+ DC WKQIAEPVM+LYTETTDGSTIE
Sbjct: 654 SDWFSPCEKLGIAAEHGYFLRLRKAVEWENCVAAVDCSWKQIAEPVMELYTETTDGSTIE 713
Query: 685 DKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVA 744
DKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVK GQN VEVKPQGV+KGL+A
Sbjct: 714 DKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKRGQNYVEVKPQGVSKGLIA 773
Query: 745 KRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKA 804
+R+LS MQER LP+FVLC+GDDRSDEDMFEVI SS GPSIAPRAE+FACTVG+KPSKA
Sbjct: 774 RRMLSMMQERGTLPEFVLCIGDDRSDEDMFEVICSSTEGPSIAPRAEIFACTVGQKPSKA 833
Query: 805 KYYLDDTVEIVRLMQGLACVADQMVPV 831
KYYLDDT EIVRLM GLA V DQ+ PV
Sbjct: 834 KYYLDDTTEIVRLMHGLASVTDQITPV 860
|
Regulates plant architecture, shape of epidermal pavement cells and branching of trichomes. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 5 |
| >sp|O23617|TPS5_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 OS=Arabidopsis thaliana GN=TPS5 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1286 bits (3327), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 615/849 (72%), Positives = 725/849 (85%), Gaps = 32/849 (3%)
Query: 1 MVSKSYSNLLELASGEAPSFGRMRRRIPRIMTVAGIISDLDDDP-ADSVCSDPSSSSVQR 59
MVS+SYSNLL+LASG SF R ++R PR+ TV G++S+LDDD ++SVCSD + SSV +
Sbjct: 1 MVSRSYSNLLDLASGNFHSFSREKKRFPRVATVTGVLSELDDDNNSNSVCSD-APSSVTQ 59
Query: 60 DRIIIVANQLPIRAQRKSDNSKGWI-FSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIH 118
DRIIIV NQLPI++ R NS G + FSWD +SLLLQLKDG+ +D+EV+Y+GCLKE+I
Sbjct: 60 DRIIIVGNQLPIKSHR---NSAGKLSFSWDNDSLLLQLKDGM-REDMEVVYIGCLKEQID 115
Query: 119 VNEQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRS 178
EQD+VSQ LL+ FKCVP ++PP+LF++YYHGFCKQ LWPLFHYMLPL+PDLGGRF+RS
Sbjct: 116 TVEQDDVSQRLLENFKCVPAYIPPELFTKYYHGFCKQHLWPLFHYMLPLTPDLGGRFDRS 175
Query: 179 LWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPS 238
LWQAY+SVNKIFAD++MEVI+P+DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPS
Sbjct: 176 LWQAYLSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPS 235
Query: 239 SEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGR 298
SEIY+TLP+R E+LRALLN+DLIGFHTFDYARHFLSCCSRMLGL+Y+SKRG IGLEYYGR
Sbjct: 236 SEIYRTLPVRNELLRALLNADLIGFHTFDYARHFLSCCSRMLGLSYQSKRGTIGLEYYGR 295
Query: 299 TVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKL 358
TVSIKILPVGIH+ QLQS+L+LP T+ KV+EL QF DQ +LLGVDDMDIFKGISLKL
Sbjct: 296 TVSIKILPVGIHISQLQSILNLPETQTKVAELRDQFLDQK--VLLGVDDMDIFKGISLKL 353
Query: 359 LAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVV 418
LAMEQLL QHPE +G+VVLVQIANPARGRGKDV+EVQ+ET +TV+RIN+ FG+PGY PVV
Sbjct: 354 LAMEQLLTQHPEKRGRVVLVQIANPARGRGKDVQEVQSETEATVKRINEMFGRPGYQPVV 413
Query: 419 LIDEPLKFYERIAYYVVAECCLVTAVRDGS-----------------------EPSSPKK 455
LID PL+F+ERIAYYV+AECCLVTAVRDG +PS+ KK
Sbjct: 414 LIDTPLQFFERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNPKLNETIGLDPSAAKK 473
Query: 456 SMLVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDV 515
SMLVVSEFIGCSPSLSGAIRVNPWNIDAV++AMD AL +++ EKQ+RHEKH++YVSTHDV
Sbjct: 474 SMLVVSEFIGCSPSLSGAIRVNPWNIDAVTEAMDYALIVSEAEKQMRHEKHHKYVSTHDV 533
Query: 516 GYWARSFLQDLERTCREHVRQRCWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRA 575
YWARSF+QDLER C +HVR+RCWGIGFGL FRVVALDP+FKKLS+EHIVSAYKRT RA
Sbjct: 534 AYWARSFIQDLERACGDHVRKRCWGIGFGLGFRVVALDPSFKKLSIEHIVSAYKRTKNRA 593
Query: 576 ILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLG 635
ILLDYDGT++ SI +P +TI+ILN+L D N+V+LVS K R+TL EWFS C++LG
Sbjct: 594 ILLDYDGTMVQPGSIRTTPTRETIEILNNLSSDPKNIVYLVSGKDRRTLTEWFSSCDDLG 653
Query: 636 IAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYE 695
+ AEHGYF R +WET V+ WKQIAEPVM+LYTETTDGSTIE KETALVW+Y+
Sbjct: 654 LGAEHGYFIRPNDGTDWETSSLVSGFEWKQIAEPVMRLYTETTDGSTIETKETALVWNYQ 713
Query: 696 DADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQERE 755
ADPDFGSCQAKEL++HLESVL N+PV+VK+GQ LVEVKPQGVNKGLVA+RLL+TMQE+
Sbjct: 714 FADPDFGSCQAKELMEHLESVLTNDPVSVKTGQQLVEVKPQGVNKGLVAERLLTTMQEKG 773
Query: 756 MLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDTVEIV 815
L DF+LCVGDDRSDEDMFEVI+S+ GP+++P AE+FACTVG+KPSKAKYYLDDT EI+
Sbjct: 774 KLLDFILCVGDDRSDEDMFEVIMSAKDGPALSPVAEIFACTVGQKPSKAKYYLDDTAEII 833
Query: 816 RLMQGLACV 824
R++ GLA
Sbjct: 834 RMLDGLAAT 842
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9LMI0|TPS7_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 OS=Arabidopsis thaliana GN=TPS7 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1137 bits (2942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/841 (63%), Positives = 672/841 (79%), Gaps = 26/841 (3%)
Query: 1 MVSKSYSNLLELASGEAPSFGRMRRRIPRIMTVAGIISDLDDDPADSVCSDPSSSSVQRD 60
M+S+SY+NLL+LASG P GR RRR+PR+MTV G +S+ D+D A S + SSV D
Sbjct: 1 MISRSYTNLLDLASGNFPVMGRERRRLPRVMTVPGNVSEFDEDQA-YSVSSDNPSSVSSD 59
Query: 61 RIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVN 120
R+IIVAN+LP++A++++ + W FSWD++SL LQLKDGL +D+E++YVG L ++ N
Sbjct: 60 RMIIVANRLPLKAEKRNGS---WSFSWDQDSLYLQLKDGL-PEDMEILYVGSLSVDVDSN 115
Query: 121 EQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLW 180
EQD+V+QILLD FKCVPTF PPDL S++Y GFCK+Q+WPLFHYMLP S D GGRF+RSLW
Sbjct: 116 EQDDVAQILLDKFKCVPTFFPPDLQSKFYDGFCKRQIWPLFHYMLPFSADHGGRFDRSLW 175
Query: 181 QAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240
+AYV+ NK+F +++EVINP+DDFVW+HDYHLMVLPTFLR+RFNR+++GFFLHSPFPSSE
Sbjct: 176 EAYVATNKLFFQKVIEVINPDDDFVWIHDYHLMVLPTFLRRRFNRIRMGFFLHSPFPSSE 235
Query: 241 IYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTV 300
IY++LP+REEIL+ALLNSDLIGFHTFDYARHFL+CCSRMLGL Y+SKRGYIGLEYYGRTV
Sbjct: 236 IYRSLPVREEILKALLNSDLIGFHTFDYARHFLTCCSRMLGLEYQSKRGYIGLEYYGRTV 295
Query: 301 SIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLA 360
IKI+PVGI+MG++QSV+ E KV EL +F +GK +LLG+DDMDIFKGI+LKLLA
Sbjct: 296 GIKIMPVGINMGRIQSVMRYSEEEGKVMELRNRF--EGKTVLLGIDDMDIFKGINLKLLA 353
Query: 361 MEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLI 420
MEQ+L QHP W+G+ VLVQI NPARG+G DV+E++ E + RIN FGKPGY P++ I
Sbjct: 354 MEQMLRQHPNWRGRAVLVQIVNPARGKGIDVEEIRGEIEESCRRINGEFGKPGYQPIIYI 413
Query: 421 DEPLKFYERIAYYVVAECCLVTAVRDG-------------------SEPSSPKKSMLVVS 461
D P+ E AYY +AEC +VTAVRDG S+ S PKKSMLV S
Sbjct: 414 DTPVSINEINAYYHIAECVVVTAVRDGMNLTPYEYIVCRQGLLGSESDFSGPKKSMLVAS 473
Query: 462 EFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARS 521
EFIGCSPSLSGAIRVNPWN++A +A++ AL M+D EKQLRHEKH+RYVSTHDV YW+RS
Sbjct: 474 EFIGCSPSLSGAIRVNPWNVEATGEALNEALSMSDAEKQLRHEKHFRYVSTHDVAYWSRS 533
Query: 522 FLQDLERTCREHVRQRCWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRAILLDYD 581
FLQDLER C +H ++RCWG+G FRVVALDPNF+KLS+ IVS YKR +RAILLDYD
Sbjct: 534 FLQDLERICVDHFKKRCWGMGISFGFRVVALDPNFRKLSIPCIVSDYKRAKSRAILLDYD 593
Query: 582 GTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHG 641
GTLMPQ SI+K+P+ + ++ L++LC DK N +F+VS + R++L++WF+PC+ +GIAAEHG
Sbjct: 594 GTLMPQNSINKAPSQEVLNFLDALCEDKKNSIFIVSGRGRESLSKWFTPCKKIGIAAEHG 653
Query: 642 YFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDF 701
YF + EEWETC +D GW QI EPVMK YTE+TDGS+IE KE+ALVW Y DADP F
Sbjct: 654 YFLKWSGSEEWETCGQSSDFGWMQIVEPVMKQYTESTDGSSIEIKESALVWQYRDADPGF 713
Query: 702 GSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFV 761
GS QAKE+L+HLESVLANEPV VKSG +VEVKPQGV+KG V++++ S+M + DFV
Sbjct: 714 GSLQAKEMLEHLESVLANEPVAVKSGHYIVEVKPQGVSKGSVSEKIFSSMAGKGKPVDFV 773
Query: 762 LCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDTVEIVRLMQGL 821
LC+GDDRSDEDMFE I ++M+ + A VFACTVG+KPSKAKYYLDDT E+ +++ L
Sbjct: 774 LCIGDDRSDEDMFEAIGNAMSKRLLCDNALVFACTVGQKPSKAKYYLDDTTEVTCMLESL 833
Query: 822 A 822
A
Sbjct: 834 A 834
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9LRA7|TPS9_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 OS=Arabidopsis thaliana GN=TPS9 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1112 bits (2875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/853 (62%), Positives = 665/853 (77%), Gaps = 28/853 (3%)
Query: 1 MVSKSYSNLLELASGEAPSFGRMRRRIPRIMTVAGIISDLDDDPADSVCSDPSSSSVQRD 60
MVS+S +N L+LAS + F + +R +PR+MTV GIIS+LD +D SD +SS+ R+
Sbjct: 1 MVSRSCANFLDLASWDLLDFPQTQRALPRVMTVPGIISELDGGYSDGS-SDVNSSNSSRE 59
Query: 61 RIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVN 120
R IIVAN LP++A+R ++ + W FSWDE+SLLLQL+DG D E +Y+G L +I ++
Sbjct: 60 RKIIVANMLPLQAKRDTETGQ-WCFSWDEDSLLLQLRDGFSSD-TEFVYIGSLNADIGIS 117
Query: 121 EQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLW 180
EQ+EVS LL F CVPTFLP ++ ++Y GFCK LWPLFHYMLP+ PD G RF+R LW
Sbjct: 118 EQEEVSHKLLLDFNCVPTFLPKEMQEKFYLGFCKHHLWPLFHYMLPMFPDHGDRFDRRLW 177
Query: 181 QAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240
QAYVS NKIF+DR+MEVINPE+D+VW+HDYHLMVLPTFLRKRFNR+KLGFFLHSPFPSSE
Sbjct: 178 QAYVSANKIFSDRVMEVINPEEDYVWIHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSE 237
Query: 241 IYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTV 300
IY+TLP+R+++LR LLN DLIGFHTFDYARHFLSCCSRMLGL YESKRG+IGL+Y+GRTV
Sbjct: 238 IYRTLPVRDDLLRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTV 297
Query: 301 SIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLA 360
IKILPVGIHMG+L+SVL+LP T AK+ E+ +QF +GK ++LGVDDMDIFKGISLKL+A
Sbjct: 298 FIKILPVGIHMGRLESVLNLPSTAAKMKEIQEQF--KGKKLILGVDDMDIFKGISLKLIA 355
Query: 361 MEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLI 420
ME+L + +GK+VL+QI NPAR GKDV+E + ETYST +RIN+ +G GY PV+LI
Sbjct: 356 MERLFETYWHMRGKLVLIQIVNPARATGKDVEEAKKETYSTAKRINERYGSAGYQPVILI 415
Query: 421 DEPLKFYERIAYYVVAECCLVTAVRDGSE-----------------------PSSPKKSM 457
D + YE+ AYY +A+CCLV AVRDG S + SM
Sbjct: 416 DRLVPRYEKTAYYAMADCCLVNAVRDGMNLVPYKYIICRQGTPGMDKAMGISHDSARTSM 475
Query: 458 LVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGY 517
LVVSEFIGCSPSLSGAIRVNPW++DAV++A++ AL M + EK+LRHEKHY YVSTHDVGY
Sbjct: 476 LVVSEFIGCSPSLSGAIRVNPWDVDAVAEAVNLALTMGETEKRLRHEKHYHYVSTHDVGY 535
Query: 518 WARSFLQDLERTCREHVRQRCWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRAIL 577
WA+SF+QDLER CREH +RCWGIGFGLSFRV++L P+F+KLS++HIVS Y+ T RAI
Sbjct: 536 WAKSFMQDLERACREHYNKRCWGIGFGLSFRVLSLSPSFRKLSIDHIVSTYRNTQRRAIF 595
Query: 578 LDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIA 637
LDYDGTL+P++SI K+PN++ + +L SLC D N VF+VS + ++L++W SPCENLGIA
Sbjct: 596 LDYDGTLVPESSIIKTPNAEVLSVLKSLCGDPKNTVFVVSGRGWESLSDWLSPCENLGIA 655
Query: 638 AEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDA 697
AEHGYF R +EWETC A+ WK + EPVM+ Y + TDGSTIE KE+ALVW ++DA
Sbjct: 656 AEHGYFIRWSSKKEWETCYSSAEAEWKTMVEPVMRSYMDATDGSTIEYKESALVWHHQDA 715
Query: 698 DPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREML 757
DPDFG+CQAKELLDHLESVLANEPV VK GQ++VEVKPQGV+KGL ++++ M E
Sbjct: 716 DPDFGACQAKELLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGLAVEKVIHQMVEDGNP 775
Query: 758 PDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDTVEIVRL 817
PD V+C+GDDRSDEDMFE I+S++ P + E+FACTVGRKPSKAKY+LDD ++++L
Sbjct: 776 PDMVMCIGDDRSDEDMFESILSTVTNPDLPMPPEIFACTVGRKPSKAKYFLDDVSDVLKL 835
Query: 818 MQGLACVADQMVP 830
+ GLA P
Sbjct: 836 LGGLAAATSSSKP 848
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q0WUI9|TPS8_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 8 OS=Arabidopsis thaliana GN=TPS8 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1110 bits (2871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/842 (62%), Positives = 655/842 (77%), Gaps = 27/842 (3%)
Query: 1 MVSKSYSNLLELASGEAPSFGRMRRRIPRIMTVAGIISDLDDDPADSVCSDPSSSSVQRD 60
MVS+S +N L+L+S + F + R +PR+MTV GII+D+D D V S +S R+
Sbjct: 1 MVSRSCANFLDLSSWDLLDFPQTPRTLPRVMTVPGIITDVDGDTTSEVTS---TSGGSRE 57
Query: 61 RIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVN 120
R IIVAN LP++++R ++ K W F+WDE+SL LQL+DG + E +YVG L +I N
Sbjct: 58 RKIIVANMLPLQSKRDAETGK-WCFNWDEDSLQLQLRDGFSSE-TEFLYVGSLNVDIETN 115
Query: 121 EQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLW 180
EQ+EVSQ LL+ F CV TFL +L +Y GFCK QLWPLFHYMLP+ PD G RF+R LW
Sbjct: 116 EQEEVSQKLLEEFNCVATFLSQELQEMFYLGFCKHQLWPLFHYMLPMFPDHGDRFDRRLW 175
Query: 181 QAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240
QAYVS NKIF+DR+MEVINPEDD+VW+ DYHLMVLPTFLRKRFNR+KLGFFLHSPFPSSE
Sbjct: 176 QAYVSANKIFSDRVMEVINPEDDYVWIQDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSE 235
Query: 241 IYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTV 300
IY+TLP+R+EILR LLN DLIGFHTFDYARHFLSCCSRMLGL YESKRG+IGL+Y+GRTV
Sbjct: 236 IYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTV 295
Query: 301 SIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLA 360
IKILPVG+HMG+L+SVLSL T AK E+ +QF +GK ++LG+DDMDIFKGISLKL+A
Sbjct: 296 YIKILPVGVHMGRLESVLSLDSTAAKTKEIQEQF--KGKKLVLGIDDMDIFKGISLKLIA 353
Query: 361 MEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLI 420
ME L + +GKVVLVQI NPAR GKDV+E + ETY T RIN+ +G Y P+VLI
Sbjct: 354 MEHLFETYWHLKGKVVLVQIVNPARSSGKDVEEAKRETYETARRINERYGTSDYKPIVLI 413
Query: 421 DEPLKFYERIAYYVVAECCLVTAVRDGSE--------------------PSSPKKSMLVV 460
D + E+ AYY A+CCLV AVRDG SSP+ S LVV
Sbjct: 414 DRLVPRSEKTAYYAAADCCLVNAVRDGMNLVPYKYIVCRQGTRSNKAVVDSSPRTSTLVV 473
Query: 461 SEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWAR 520
SEFIGCSPSLSGAIRVNPW++DAV++A++SAL+M++ EKQLRHEKHY Y+STHDVGYWA+
Sbjct: 474 SEFIGCSPSLSGAIRVNPWDVDAVAEAVNSALKMSETEKQLRHEKHYHYISTHDVGYWAK 533
Query: 521 SFLQDLERTCREHVRQRCWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRAILLDY 580
SF+QDLER CR+H +RCWGIGFGL FRV++L P+F+KLS+EHIV Y++T RAI LDY
Sbjct: 534 SFMQDLERACRDHYSKRCWGIGFGLGFRVLSLSPSFRKLSVEHIVPVYRKTQRRAIFLDY 593
Query: 581 DGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEH 640
DGTL+P++SI + P+++ + +L +LC D NN VF+VS + R++L+ W SPCENLGIAAEH
Sbjct: 594 DGTLVPESSIVQDPSNEVVSVLKALCEDPNNTVFIVSGRGRESLSNWLSPCENLGIAAEH 653
Query: 641 GYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPD 700
GYF R + +EWETC D W+ + EPVM+ Y E TDG++IE KE+ALVW ++DADPD
Sbjct: 654 GYFIRWKSKDEWETCYSPTDTEWRSMVEPVMRSYMEATDGTSIEFKESALVWHHQDADPD 713
Query: 701 FGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDF 760
FGSCQAKE+LDHLESVLANEPV VK GQ++VEVKPQGV+KGL A++++ M ER P+
Sbjct: 714 FGSCQAKEMLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGLAAEKVIREMVERGEPPEM 773
Query: 761 VLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDTVEIVRLMQG 820
V+C+GDDRSDEDMFE I+S++ P + + EVFACTVGRKPSKAKY+LDD ++++L++G
Sbjct: 774 VMCIGDDRSDEDMFESILSTVTNPELLVQPEVFACTVGRKPSKAKYFLDDEADVLKLLRG 833
Query: 821 LA 822
L
Sbjct: 834 LG 835
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|O80738|TPS10_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10 OS=Arabidopsis thaliana GN=TPS10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1083 bits (2801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/849 (61%), Positives = 650/849 (76%), Gaps = 36/849 (4%)
Query: 1 MVSKSYSNLLELASGEAPSFGRMRRRIPRIMTVAGIISDLD----DDPADSVCSDPSSSS 56
M SKS+ NLL+LASG+ + R +PR+MTV GIISD+D D V S P
Sbjct: 1 MGSKSFGNLLDLASGDLLDIPQTPRYLPRVMTVPGIISDVDGYGISDGDSDVISLPC--- 57
Query: 57 VQRDRIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEE 116
R+R IIVAN LP+ ++ S+ K W FS D +S LL LKDG + EVIYVG LK
Sbjct: 58 --RERKIIVANFLPLNGKKDSETGK-WKFSLDNDSPLLHLKDGFSPE-TEVIYVGSLKTH 113
Query: 117 IHVNEQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFN 176
+ V+EQDEVS L + F CV TFLP D+ ++Y GFCKQQLWPLFHYMLP+ PD G RF+
Sbjct: 114 VDVSEQDEVSHNLFEEFNCVATFLPQDVHKKFYLGFCKQQLWPLFHYMLPMCPDHGERFD 173
Query: 177 RSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPF 236
R LWQAYVS NKIFAD++M VIN E+D++W+HDYHLMVLPTFLR+RF+RVKLGFFLHSPF
Sbjct: 174 RGLWQAYVSANKIFADKVMGVINLEEDYIWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPF 233
Query: 237 PSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYY 296
PSSEIY+TLP+REE+LR LLN DLIGFHTFDYARHFLSCC RMLGL YESKRG+I L+Y
Sbjct: 234 PSSEIYRTLPVREELLRGLLNCDLIGFHTFDYARHFLSCCCRMLGLEYESKRGHIALDYL 293
Query: 297 GRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISL 356
GRTV +KILP+GIHMG+L+SVL+LP T K+ E+ +++ +GK ++LGVDDMDIFKG+SL
Sbjct: 294 GRTVFLKILPIGIHMGRLESVLNLPATAEKLKEIQEKY--RGKKIILGVDDMDIFKGLSL 351
Query: 357 KLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDP 416
K+LA E LL Q+P GK+VL+QI NPARG GKDV+E + ETY TV+RIN+ +G Y+P
Sbjct: 352 KILAFEHLLQQYPSMLGKIVLIQIVNPARGSGKDVQEARKETYDTVKRINERYGSHDYEP 411
Query: 417 VVLIDEPLKFYERIAYYVVAECCLVTAVRDG-------------SEPSS----------P 453
VVLID P+ +E+ AYY +AECC+V AVRDG PS P
Sbjct: 412 VVLIDRPVPRFEKSAYYALAECCIVNAVRDGMNLVPYKYTVCRQGTPSMNKSLGVSDDLP 471
Query: 454 KKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTH 513
+ S LV+SEFIGCSPSLSGAIRVNPW++DAV+D++ SA+ M+D EKQLRH+KH+ Y+STH
Sbjct: 472 RTSTLVLSEFIGCSPSLSGAIRVNPWDVDAVADSLYSAITMSDFEKQLRHKKHFHYISTH 531
Query: 514 DVGYWARSFLQDLERTCREHVRQRCWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTT 573
DVGYWARSF QDLER R+H +RCWG+G+GL FR+VAL PNF++LS+E VSAY+R++
Sbjct: 532 DVGYWARSFSQDLERASRDHYSKRCWGVGWGLGFRLVALSPNFRRLSIEQTVSAYRRSSK 591
Query: 574 RAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCEN 633
RAI LDYDGTL+P+ SI K P+++ I L +LC D NN +F+VS + + +L+EW +PCEN
Sbjct: 592 RAIFLDYDGTLVPETSIVKDPSAEVISALKALCSDPNNTIFIVSGRGKVSLSEWLAPCEN 651
Query: 634 LGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWS 693
LGIAAEHGYF R + +WET D WK++ EP+M+LYTETTDGS IE KE+ALVW
Sbjct: 652 LGIAAEHGYFTRWNKSSDWETSGLSDDLEWKKVVEPIMRLYTETTDGSNIEAKESALVWH 711
Query: 694 YEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQE 753
++DADPDFGSCQAKELLDHLE+VL NEPV V G +VEVKPQGV+KGLV ++LS M E
Sbjct: 712 HQDADPDFGSCQAKELLDHLETVLVNEPVIVNRGHQIVEVKPQGVSKGLVTGKILSRMLE 771
Query: 754 REMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDTVE 813
+ PDFV+C+GDDRSDE+MFE I ++++ S + E+FACTVGRKPSKAKY+LD+ +
Sbjct: 772 DGIAPDFVVCIGDDRSDEEMFENISTTLSAQSSSMSTEIFACTVGRKPSKAKYFLDEVSD 831
Query: 814 IVRLMQGLA 822
+V+L+QGLA
Sbjct: 832 VVKLLQGLA 840
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9ZV48|TPS11_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 OS=Arabidopsis thaliana GN=TPS11 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 988 bits (2555), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/854 (56%), Positives = 634/854 (74%), Gaps = 46/854 (5%)
Query: 1 MVSKSYSNLLELASGEAPSFGRM-RRRIPRIMT-VAGIISDLDDDPADSVCSDPSSSS-V 57
M +S+ + L L S A + M R RIP +T ++G+ +D DP+ + V
Sbjct: 1 MSPESWKDQLSLVS--ADDYRIMGRNRIPNAVTKLSGLETD-----------DPNGGAWV 47
Query: 58 QRDRIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEI 117
+ + I+V+NQLP+RA R ++K W F +D +SL LQLKDG + EV+YVG L ++
Sbjct: 48 TKPKRIVVSNQLPLRAHRDISSNK-WCFEFDNDSLYLQLKDGF-PPETEVVYVGSLNADV 105
Query: 118 HVNEQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNR 177
+EQ++VSQ LL+ F+CVPTFLP DL ++YYHGFCK LWP+FHY+LP++ G F+R
Sbjct: 106 LPSEQEDVSQFLLEKFQCVPTFLPSDLLNKYYHGFCKHYLWPIFHYLLPMTQAQGSLFDR 165
Query: 178 SLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFP 237
S W+AY +VNKIFAD+I EV+NP+DD+VW+HDYHLM+LPTFLR RF+R+KLG FLHSPFP
Sbjct: 166 SNWRAYTTVNKIFADKIFEVLNPDDDYVWIHDYHLMILPTFLRNRFHRIKLGIFLHSPFP 225
Query: 238 SSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYG 297
SSEIY+TLP+R+EIL+ LN DL+GFHTFDYARHFLSCCSRMLGL YESKRGYIGLEY+G
Sbjct: 226 SSEIYRTLPVRDEILKGFLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFG 285
Query: 298 RTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLK 357
RTVSIKILPVGIHMGQ++S+ + T KV L ++F +G +++LGVDD+D+FKGISLK
Sbjct: 286 RTVSIKILPVGIHMGQIESIKASEKTAEKVKRLRERF--KGNIVMLGVDDLDMFKGISLK 343
Query: 358 LLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPG-YDP 416
AM QLL Q+ E +GKVVLVQI NPAR GKDV++V+ + + IN FG+PG Y P
Sbjct: 344 FWAMGQLLEQNEELRGKVVLVQITNPARSSGKDVQDVEKQINLIADEINSKFGRPGGYKP 403
Query: 417 VVLIDEPLKFYERIAYYVVAECCLVTAVRDG----------SEPSSP------------- 453
+V I+ P+ +++AYY ++EC +V AVRDG + SP
Sbjct: 404 IVFINGPVSTLDKVAYYAISECVVVNAVRDGMNLVPYKYTVTRQGSPALDAALGFGEDDV 463
Query: 454 KKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTH 513
+KS+++VSEFIGCSPSLSGAIRVNPWNIDAV++AM SA+ M+D+EK LRH+KH++Y+S+H
Sbjct: 464 RKSVIIVSEFIGCSPSLSGAIRVNPWNIDAVTNAMSSAMTMSDKEKNLRHQKHHKYISSH 523
Query: 514 DVGYWARSFLQDLERTCREHVRQRCWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTT 573
+V YWARS+ QDL+R C++H +R WG+GFGL F+VVALDPNF++L E IV AY+R+++
Sbjct: 524 NVAYWARSYDQDLQRACKDHYNKRFWGVGFGLFFKVVALDPNFRRLCGETIVPAYRRSSS 583
Query: 574 RAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCEN 633
R ILLDYDGT+M Q ++DK P+ I +LN LC D +N+VF+VS + + L++WF C N
Sbjct: 584 RLILLDYDGTMMDQDTLDKRPSDDLISLLNRLCDDPSNLVFIVSGRGKDPLSKWFDSCPN 643
Query: 634 LGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWS 693
LGI+AEHGYF R + WET AD WK+IA+PVM Y E TDGS IE+KE+A+VW
Sbjct: 644 LGISAEHGYFTRWNSNSPWETSELPADLSWKKIAKPVMNHYMEATDGSFIEEKESAMVWH 703
Query: 694 YEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQE 753
+++AD FGS QAKELLDHLESVL NEPV VK GQ++VEVKPQGV+KG V + L++TM+
Sbjct: 704 HQEADHSFGSWQAKELLDHLESVLTNEPVVVKRGQHIVEVKPQGVSKGKVVEHLIATMRN 763
Query: 754 -REMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDTV 812
+ PDF+LC+GDDRSDEDMF+ I+ SI EVFACTVG+KPSKAKYYLDDT
Sbjct: 764 TKGKRPDFLLCIGDDRSDEDMFDSIVKHQDVSSIG-LEEVFACTVGQKPSKAKYYLDDTP 822
Query: 813 EIVRLMQGLACVAD 826
++++++ LA +D
Sbjct: 823 SVIKMLEWLASASD 836
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q54K57|TPSA_DICDI Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A OS=Dictyostelium discoideum GN=tpsA PE=2 SV=1 | Back alignment and function description |
|---|
Score = 464 bits (1193), Expect = e-129, Method: Compositional matrix adjust.
Identities = 257/770 (33%), Positives = 430/770 (55%), Gaps = 67/770 (8%)
Query: 61 RIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVN 120
R+I+V+N+LP+ +++S+ W L+ L GL + I+VG + EI +
Sbjct: 17 RLIVVSNRLPVSIKKESNGK--WSCKMSSGGLVAAL-SGLKSN---FIWVGWIGAEIEED 70
Query: 121 EQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLW 180
++ E+ ++L + C+P FL + + +Y+GF LWPLFHY LP D R +W
Sbjct: 71 DRKEIKELLWKDYSCIPVFLSEKVANEHYNGFSNGVLWPLFHY-LPGDLDYDDR----IW 125
Query: 181 QAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240
+YV N+ F+ + E++ P +D VWVHDYH+M+LP L+++ ++GFFLH PFPSSE
Sbjct: 126 NSYVEANEQFSSVVAEILKP-NDLVWVHDYHMMLLPEILKQKKPDARIGFFLHIPFPSSE 184
Query: 241 IYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTV 300
I++ LP R+EIL +LN LIGFHT+DYARHFL C+R++GL G+ + R V
Sbjct: 185 IFRVLPCRKEILLGILNCCLIGFHTYDYARHFLKSCTRIVGLETAPN----GVYFKDRFV 240
Query: 301 SIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLA 360
+ + PVGI + L + ++ EL + F +G +L+G+D +D KGI KL A
Sbjct: 241 QVGVFPVGIDPDKFFESLKTTQVQNRIKELKESF--EGTKVLIGIDRLDYIKGIPQKLQA 298
Query: 361 MEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLI 420
+E+L ++PEW+GK+VL+Q+A P+R ++ ++++ E V RIN +G GY P+ +
Sbjct: 299 IERLFQKYPEWKGKLVLIQVAVPSRQDVEEYQKLKKEVEELVGRINGLYGSIGYSPIHYL 358
Query: 421 DEPLKFYERIAYYVVAECCLVTAVRDGSEP--------SSPKKSMLVVSEFIGCSPSLSG 472
+ + E A Y +++ L+T++RDG + +L++SEF G + SLSG
Sbjct: 359 FQSVDPSELTALYNISDAALITSIRDGMNLVAQEYIVCQTENNGVLILSEFTGAAQSLSG 418
Query: 473 AIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRE 532
A+ +NPWN + V+D++ ++L M +E++ +H+ +YV+ H +W F+++L +
Sbjct: 419 AVMINPWNTEEVADSIHNSLLMPPEEREEKHQMLLKYVTKHTASHWGLGFVKELNKASSN 478
Query: 533 HVRQRCWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDK 592
+ ++V + +KL +E +V YK++ R ++ YDGTL+P ++ +
Sbjct: 479 -------------TDKMVTI----QKLDIEKVVDIYKQSKRRLLIFAYDGTLIPYNNVPQ 521
Query: 593 --SPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDE 650
P+ + ++ + L D V+++S + +KTL+EWF + +G++AE+G FF+L
Sbjct: 522 LSRPSQELLNSFDILSNDPKTDVYILSGRDKKTLSEWFLGIQ-IGLSAEYGCFFKLPEST 580
Query: 651 EWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELL 710
EWE +P D WK+ P+ K +T T GS E+KE W Y +ADP FGS QA+EL
Sbjct: 581 EWEQQVPSMDLSWKETIRPLFKYFTLRTPGSFFEEKEMLFTWHYRNADPIFGSIQARELH 640
Query: 711 DHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSD 770
HL+ N P+ V G + V+ +N K++++ + + D +L +GD
Sbjct: 641 LHLD----NLPLDVIVGDKTLGVRSYNINPLSSMKKVITDTIPKGL--DLILLIGD---- 690
Query: 771 EDMFEVIISSMAGPSIAPR--AEVFACTVGRKPSKAKYYLDDTVEIVRLM 818
+ PS P ++F +VG+K K Y+L D E+ L+
Sbjct: 691 ---------THIHPSELPTFDGKIFNISVGKKSVKDSYHLSDPAEVNYLI 731
|
Synthesizes trehalose 6-phosphate, the precursor for the production of trehalose, the main carbohydrate storage reserve of the dormant spore. Trehalose accumulates in both prestalk and prespore cells and then is rapidly metabolized during terminal differentiation of stalk cells, while being stored in spores, where it serves as the principal energy and carbon source for germination. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9FZ57|TPS2_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 2 OS=Arabidopsis thaliana GN=TPS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 439 bits (1130), Expect = e-122, Method: Compositional matrix adjust.
Identities = 286/800 (35%), Positives = 431/800 (53%), Gaps = 64/800 (8%)
Query: 58 QRDRIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLG-DDDIEVIYVGCLKEE 116
+R R+++VAN+LP+ A+R +NS W L+ L LG + +VG +
Sbjct: 10 ERPRLLVVANRLPVSAKRTGENS--WSLEMSPGGLVSGL---LGITSQFDTKWVGWPGVD 64
Query: 117 IHVNEQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYM-LPLSP--DLGG 173
+H + L KC+P FL +F +YY+G+C LWP+ H+M LP D
Sbjct: 65 VHDEIEKNALTESLAEMKCIPVFLN-GVFDQYYNGYCNGILWPILHHMGLPQEDQHDTNQ 123
Query: 174 RFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLH 233
F + + AY N++F D I++ E D VW HDYHLM LP +L++ N++K+G+FLH
Sbjct: 124 TF-ETQYDAYKKANRMFLDVIIDNYE-EGDIVWCHDYHLMFLPQYLKEYNNKIKVGWFLH 181
Query: 234 SPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGL--TYESKRGYI 291
SPFPSSE+YKTLP R E+LRA+L +DL+GFHT+D+ARHFLS C+R+LG+ T+E
Sbjct: 182 SPFPSSEVYKTLPSRSELLRAILAADLLGFHTYDFARHFLSTCTRILGVEGTHE------ 235
Query: 292 GLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIF 351
G+ Y GR + + P+GI + LP +++EL ++F GK ++LGVD +D+
Sbjct: 236 GVVYQGRVTRVAVFPIGIDPDRFIRTCKLPEVTQQMNELQEKF--AGKKVILGVDRLDMI 293
Query: 352 KGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGK 411
KGI K LA E+ L ++P W+ KVVLVQIA P R + ++++++ + V RIN FG
Sbjct: 294 KGIPQKYLAFEKFLEENPYWRDKVVLVQIAVPTRNDVPEYRKLKSQVHGLVGRINGRFGS 353
Query: 412 PGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEPSS--------PKKSMLVVSEF 463
P+ +D + F A Y +A+ LVT++RDG S KK +LV+SEF
Sbjct: 354 VSSLPIHHLDCSVDFNYLCAIYAIADVMLVTSLRDGMNLVSYEFVACQEAKKGVLVLSEF 413
Query: 464 IGCSPSLS-GAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSF 522
G SL GA+ VNPW++ VS A+ AL M +E++ RH +++YV TH W F
Sbjct: 414 AGAGQSLGVGALIVNPWDVTEVSSAIKEALNMPAEERETRHRSNFQYVCTHSAEKWGLDF 473
Query: 523 LQDLERTCREHVRQRCWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRAILLDYDG 582
+ +L E Q R + L +L + ++ Y ++ R I+L + G
Sbjct: 474 MSELNGIIPESEMQ----------MRKIPL-----QLPEQDVIQQYSQSNNRLIILGFFG 518
Query: 583 TLM-PQAS----IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIA 637
TL P S +D N + L +LC D V ++S + L + F N+ +A
Sbjct: 519 TLAEPMNSGTKEMDLKLNPELKGTLKALCNDPKTTVVVLSRSGKNILNKNFGES-NIWLA 577
Query: 638 AEHGYFFRLRRDEEWETCIPV-ADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYED 696
AE+G F + + EW T +P + W + V K +T+ T S E ET+LVW+YE
Sbjct: 578 AENGMFEK-QTTGEWVTNMPQNVNLDWVDGVKNVFKYFTDRTPRSYFEASETSLVWNYEY 636
Query: 697 ADPDFGSCQAKELLDHL-ESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQERE 755
AD +FG QA++LL +L ++N V V G + VEV G KG R+L + R+
Sbjct: 637 ADVEFGRAQARDLLQYLWAGPISNASVDVVRGNHSVEVHAIGETKGAAIGRILGEIVHRK 696
Query: 756 MLP---DFVLCVGDD-RSDEDMFEV----IISSMAGPSIAPRAE-VFACTVGRKPSKAKY 806
+ DFV C G DED++ I+SS + + + E F+ +G+ +KA+Y
Sbjct: 697 SMTTPIDFVFCSGYFLEKDEDIYTFFESKILSSKSPNGLDLKKENYFSAAIGQARTKARY 756
Query: 807 YLDDTVEIVRLMQGLACVAD 826
+D +V L+ LA VAD
Sbjct: 757 VIDSAHGVVDLLHKLAVVAD 776
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q54NU9|TPSB_DICDI Alpha,alpha-trehalose-phosphate synthase [UDP-forming] B OS=Dictyostelium discoideum GN=tpsB PE=3 SV=1 | Back alignment and function description |
|---|
Score = 430 bits (1106), Expect = e-119, Method: Compositional matrix adjust.
Identities = 245/744 (32%), Positives = 402/744 (54%), Gaps = 66/744 (8%)
Query: 101 GDDDIE-VIYVGCLKEEIHVNEQDEVSQILLD---TFKCVPTFLPPDLFSRYYHGFCKQQ 156
D+IE +++G E++ +E+ ++Q + + F+ V FL P F YY G+CK
Sbjct: 89 AKDEIEDWLWIGWSHCEVNEDEEPMLNQAIKEFSPHFEHV--FLNPRQFENYYKGYCKNG 146
Query: 157 LWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLP 216
LW L HY + R W+ YV VN++FA++I V P D +W+HDYHLM++P
Sbjct: 147 LWLLLHYQMNFI-----RMQSEWWEEYVGVNQMFAEKIASVWRP-SDIIWIHDYHLMLVP 200
Query: 217 TFLRKRFN-RVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSC 275
LR+ +GFF H+PFPS E+++ LP R+E+L+ +L+S+LIGF +F+Y RHF S
Sbjct: 201 QMLRQLLPPEASIGFFFHAPFPSYELFRILPNRKELLKGILSSNLIGFQSFEYVRHFKSS 260
Query: 276 CSRMLGLTYESKRGYIGLEYY--GRT--VSIKILPVGIHMGQLQSVLSLPGTEAKVSELI 331
C+R+L L K GLE + G T +++ P+G+ L+LP ++V L
Sbjct: 261 CARLLDLEVHPK----GLEIFEDGSTHFTKLQVYPIGVDYNDFAKNLNLPEVSSRVESLR 316
Query: 332 KQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDV 391
K F +GK +++ D +D +G+ KL EQLL HPE+ GK+V +QI P G +
Sbjct: 317 KIF--KGKKVVVARDRLDQIEGVPRKLEVFEQLLNDHPEYIGKLVFIQIYEPTVEEGDET 374
Query: 392 KE---VQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGS 448
E + V RIN FGK ++P+ I++ + + E A Y +A+ L+T +RDG
Sbjct: 375 DEQKILHKTVNEMVGRINGKFGKLSFNPIEYINKKISYEELSALYKLADIALITPIRDGM 434
Query: 449 EPSSPKK--------SMLVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQ 500
+S + +L++SEF G + L G+I VNP++ + +A+ AL M+ +++
Sbjct: 435 NLTSHEYVVCQKDNFGVLILSEFAGAARCLGGSIIVNPFSKKEIMEAIIEALNMSMHDRK 494
Query: 501 LRHEKHYRYVSTHDVGYWARSFLQDLERTCREHVRQRCWGIGFGLSFRVVALDPNFKKLS 560
L+H+ +Y YV + +W + FL DL ++ + ++ + + +
Sbjct: 495 LKHQINYNYVLANTSSFWGKRFLCDLNEATQKEI-----------------METSVPRAN 537
Query: 561 MEHIVSAYKRTTTRAILLDYDGTLMPQASIDKS--PNSKTIDILNSLCRDKNNMVFLVSA 618
+ I +YK+ R LDYDGTL P + P+ + ID+L+ L D+ N V+++S
Sbjct: 538 FQEIEDSYKKAKVRVFFLDYDGTLTPLVRLPSQAMPSKQLIDVLSKLTEDRRNEVYVISG 597
Query: 619 KSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETT 678
+ R +L +W +G++ EHG F R + + T P A+ WK +M+ + + T
Sbjct: 598 RDRSSLEKWLGHLP-IGMSCEHGVFTRQPGENQPWTESPNAEVQWKDTVLSIMQDFEDRT 656
Query: 679 DGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGV 738
GS E K+ + W Y +ADPDFG QAKEL+ L SV P+ + SG+ +EVKP G+
Sbjct: 657 PGSMTETKQVNITWHYRNADPDFGQFQAKELIAQLRSVANKYPLDILSGKKAIEVKPIGI 716
Query: 739 NKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVG 798
NKG + K +L + DF+LC+GDD++DEDMF+ + + P + C
Sbjct: 717 NKGEIVKMILQKID-----ADFILCIGDDKTDEDMFKALYN-------VPSFTIRVCGDL 764
Query: 799 RKPSKAKYYLDDTVEIVRLMQGLA 822
+ +KA+ ++ + E++ L+ L+
Sbjct: 765 EESTKARGVVESSSEVLTLLNRLS 788
|
Synthesizes trehalose 6-phosphate, the precursor for the production of trehalose, the main carbohydrate storage reserve of the dormant spore. Trehalose accumulates in both prestalk and prespore cells and then is rapidly metabolized during terminal differentiation of stalk cells, while being stored in spores, where it serves as the principal energy and carbon source for germination. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 831 | ||||||
| 147818682 | 854 | hypothetical protein VITISV_023086 [Viti | 1.0 | 0.973 | 0.881 | 0.0 | |
| 359472585 | 865 | PREDICTED: alpha,alpha-trehalose-phospha | 0.993 | 0.954 | 0.884 | 0.0 | |
| 357521377 | 853 | Alpha,alpha-trehalose-phosphate synthase | 0.995 | 0.969 | 0.845 | 0.0 | |
| 224101911 | 851 | predicted protein [Populus trichocarpa] | 0.993 | 0.970 | 0.853 | 0.0 | |
| 224108257 | 854 | predicted protein [Populus trichocarpa] | 0.980 | 0.954 | 0.854 | 0.0 | |
| 356521161 | 853 | PREDICTED: alpha,alpha-trehalose-phospha | 0.993 | 0.968 | 0.844 | 0.0 | |
| 12324075 | 847 | putative trehalose-6-phosphate synthase; | 0.990 | 0.971 | 0.815 | 0.0 | |
| 42572029 | 860 | alpha,alpha-trehalose-phosphate synthase | 0.991 | 0.958 | 0.805 | 0.0 | |
| 297841523 | 857 | predicted protein [Arabidopsis lyrata su | 0.991 | 0.961 | 0.809 | 0.0 | |
| 351629998 | 857 | trehalose-6-phosphate synthase [Salvia m | 1.0 | 0.969 | 0.827 | 0.0 |
| >gi|147818682|emb|CAN76185.1| hypothetical protein VITISV_023086 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1546 bits (4002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 753/854 (88%), Positives = 796/854 (93%), Gaps = 23/854 (2%)
Query: 1 MVSKSYSNLLELASGEAPSFGRMRRRIPRIMTVAGIISDLDDDPADSVCSDPSSSSVQRD 60
MVS+SYSNLLELASGE+PSFGRM RRIPRIMTVAGIISDLDDDP++SVCSDPSSSSVQRD
Sbjct: 1 MVSRSYSNLLELASGESPSFGRMSRRIPRIMTVAGIISDLDDDPSESVCSDPSSSSVQRD 60
Query: 61 RIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVN 120
R+IIVANQLPIRAQRKS+N+ GWIFSWDENSLLLQLKDGLGDD+IEVIYVGCLKEEIH
Sbjct: 61 RLIIVANQLPIRAQRKSENNNGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHPC 120
Query: 121 EQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLW 180
EQDEVSQILL+TFKCVPTFLPPDLF+RYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLW
Sbjct: 121 EQDEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLW 180
Query: 181 QAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240
QAYVSVNKIFADRIMEVINPEDDFVW+HDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE
Sbjct: 181 QAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240
Query: 241 IYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTV 300
IY+TLPIREE+LRALLNSDLIGFHTFDYARHFLSCCSRMLGL+YESKRGYIGLEYYGRTV
Sbjct: 241 IYRTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTV 300
Query: 301 SIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLA 360
SIKILPVGIHMGQLQSVLSLP TE KV+ELIKQF DQ ++MLLGVDDMDIFKGISLKLLA
Sbjct: 301 SIKILPVGIHMGQLQSVLSLPETEEKVAELIKQFCDQDRIMLLGVDDMDIFKGISLKLLA 360
Query: 361 MEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLI 420
MEQLL+QHPEWQGKVVLVQIANPARGRGKDVKEVQ ET+STV+RIN+TFGKPGYDPVVLI
Sbjct: 361 MEQLLVQHPEWQGKVVLVQIANPARGRGKDVKEVQTETFSTVKRINETFGKPGYDPVVLI 420
Query: 421 DEPLKFYERIAYYVVAECCLVTAVRDGS-----------------------EPSSPKKSM 457
DEPLKFYERIAYYVVAECCLVTAVRDG E S PKKSM
Sbjct: 421 DEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKVLGLESSIPKKSM 480
Query: 458 LVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGY 517
LVVSEFIGCSPSLSGAIRVNPWNIDAV+DAMDSALEM + EKQLRHEKHYRYVSTHDVGY
Sbjct: 481 LVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMLEPEKQLRHEKHYRYVSTHDVGY 540
Query: 518 WARSFLQDLERTCREHVRQRCWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRAIL 577
WARSFLQDLERTCR+HVR+RCWGIGFGLSFRVVALDPNF+KLSMEHIVSAYKRTTTRAIL
Sbjct: 541 WARSFLQDLERTCRDHVRRRCWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAIL 600
Query: 578 LDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIA 637
LDYDGTLMPQASIDK P K+I++L +LCRD+NNMV +VSA+SRK L +WFSPCENLGIA
Sbjct: 601 LDYDGTLMPQASIDKGPTPKSIEMLKTLCRDENNMVLIVSARSRKKLEDWFSPCENLGIA 660
Query: 638 AEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDA 697
AEHGYF R + D EWETC+PVADC WKQIAEPVMKLYTETTDGSTIEDKETAL W YEDA
Sbjct: 661 AEHGYFLRPKGDVEWETCVPVADCSWKQIAEPVMKLYTETTDGSTIEDKETALAWCYEDA 720
Query: 698 DPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREML 757
DPDFGSCQAKELLDHLESVLANEPVTVKSGQ+LVEVKPQGV+KG+VAKRLLSTMQER ML
Sbjct: 721 DPDFGSCQAKELLDHLESVLANEPVTVKSGQSLVEVKPQGVSKGIVAKRLLSTMQERGML 780
Query: 758 PDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDTVEIVRL 817
PDFVLC+GDDRSDEDMFE I SSMAG SIAPRAEVFACTVGRKPSKAKYYLDDT EIVRL
Sbjct: 781 PDFVLCIGDDRSDEDMFEAITSSMAGSSIAPRAEVFACTVGRKPSKAKYYLDDTGEIVRL 840
Query: 818 MQGLACVADQMVPV 831
MQGLA V++Q VP+
Sbjct: 841 MQGLASVSEQPVPL 854
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359472585|ref|XP_002284972.2| PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1542 bits (3993), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 751/849 (88%), Positives = 792/849 (93%), Gaps = 23/849 (2%)
Query: 1 MVSKSYSNLLELASGEAPSFGRMRRRIPRIMTVAGIISDLDDDPADSVCSDPSSSSVQRD 60
MVS+SYSNLLELASGE+PSFGRM RRIPRIMTVAGIISDLDDDP++SVCSDPSSSSVQRD
Sbjct: 1 MVSRSYSNLLELASGESPSFGRMSRRIPRIMTVAGIISDLDDDPSESVCSDPSSSSVQRD 60
Query: 61 RIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVN 120
R+IIVANQLPIRAQRKS+N+ GWIFSWDENSLLLQLKDGLGDD+IEVIYVGCLKEEIH
Sbjct: 61 RLIIVANQLPIRAQRKSENNNGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHPC 120
Query: 121 EQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLW 180
EQDEVSQILL+TFKCVPTFLPPDLF+RYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLW
Sbjct: 121 EQDEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLW 180
Query: 181 QAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240
QAYVSVNKIFADRIMEVINPEDDFVW+HDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE
Sbjct: 181 QAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240
Query: 241 IYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTV 300
IY+TLPIREE+LRALLNSDLIGFHTFDYARHFLSCCSRMLGL+YESKRGYIGLEYYGRTV
Sbjct: 241 IYRTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTV 300
Query: 301 SIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLA 360
SIKILPVGIHMGQLQSVLSLP TE KV+ELIKQF DQ ++MLLGVDDMDIFKGISLKLLA
Sbjct: 301 SIKILPVGIHMGQLQSVLSLPETEEKVAELIKQFCDQDRIMLLGVDDMDIFKGISLKLLA 360
Query: 361 MEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLI 420
MEQLL+QHPEWQGKVVLVQIANPARGRGKDVKEVQ ET+STV+RIN+TFGKPGYDPVVLI
Sbjct: 361 MEQLLVQHPEWQGKVVLVQIANPARGRGKDVKEVQTETFSTVKRINETFGKPGYDPVVLI 420
Query: 421 DEPLKFYERIAYYVVAECCLVTAVRDGS-----------------------EPSSPKKSM 457
DEPLKFYERIAYYVVAECCLVTAVRDG E S PKKSM
Sbjct: 421 DEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKVLGLESSIPKKSM 480
Query: 458 LVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGY 517
LVVSEFIGCSPSLSGAIRVNPWNIDAV+DAMDSALEM + EKQLRHEKHYRYVSTHDVGY
Sbjct: 481 LVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMLEPEKQLRHEKHYRYVSTHDVGY 540
Query: 518 WARSFLQDLERTCREHVRQRCWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRAIL 577
WARSFLQDLERTCR+HVR+RCWGIGFGLSFRVVALDPNF+KLSMEHIVSAYKRTTTRAIL
Sbjct: 541 WARSFLQDLERTCRDHVRRRCWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAIL 600
Query: 578 LDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIA 637
LDYDGTLMPQASIDK P K+I++L +LCRD+NNMV +VSA+SRK L +WFSPCENLGIA
Sbjct: 601 LDYDGTLMPQASIDKGPTPKSIEMLKTLCRDENNMVLIVSARSRKKLEDWFSPCENLGIA 660
Query: 638 AEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDA 697
AEHGYF R + D EWETC+PVADC WKQIAEPVMKLYTETTDGSTIEDKETAL W YEDA
Sbjct: 661 AEHGYFLRPKGDVEWETCVPVADCSWKQIAEPVMKLYTETTDGSTIEDKETALAWCYEDA 720
Query: 698 DPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREML 757
DPDFGSCQAKELLDHLESVLANEPVTVKSGQ+LVEVKPQGV+KG+VAKRLLSTMQER ML
Sbjct: 721 DPDFGSCQAKELLDHLESVLANEPVTVKSGQSLVEVKPQGVSKGIVAKRLLSTMQERGML 780
Query: 758 PDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDTVEIVRL 817
PDFVLC+GDDRSDEDMFE I SSMAG SIAPRAEVFACTVGRKPSKAKYYLDDT EIVRL
Sbjct: 781 PDFVLCIGDDRSDEDMFEAITSSMAGSSIAPRAEVFACTVGRKPSKAKYYLDDTGEIVRL 840
Query: 818 MQGLACVAD 826
MQGLA +AD
Sbjct: 841 MQGLASLAD 849
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|357521377|ref|XP_003630977.1| Alpha,alpha-trehalose-phosphate synthase [Medicago truncatula] gi|355524999|gb|AET05453.1| Alpha,alpha-trehalose-phosphate synthase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 1503 bits (3891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 721/853 (84%), Positives = 775/853 (90%), Gaps = 26/853 (3%)
Query: 1 MVSKSYSNLLELASGEAPSFGRMRRRIPRIMTVAGIISDLDDDPADSVCSDPSSSSVQRD 60
MVS+SYSNLLEL SG++P+F + RRIPRIMTVAG+ISD+DDDP ++ CS+PSSSSVQR+
Sbjct: 1 MVSRSYSNLLELVSGDSPTFENINRRIPRIMTVAGLISDVDDDPLETGCSEPSSSSVQRE 60
Query: 61 RIIIVANQLPIRAQRKSD--NSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIH 118
RIIIVANQLPI+AQRK D N W FSWDENSLLLQLKDGLGDDD +VIYVGCLKE++H
Sbjct: 61 RIIIVANQLPIKAQRKQDGNNMNKWFFSWDENSLLLQLKDGLGDDDTDVIYVGCLKEDVH 120
Query: 119 VNEQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRS 178
NEQDEVSQILL+TFKCVPTFLP DLF+RYYHGFCKQQLWPLFHYMLPLSP LGGRFNRS
Sbjct: 121 PNEQDEVSQILLETFKCVPTFLPGDLFTRYYHGFCKQQLWPLFHYMLPLSPGLGGRFNRS 180
Query: 179 LWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPS 238
LWQAYVSVNKIFADRIMEVINPEDD+VW+HDYHLMVLPTFLRKRFNRVKLGFFLHSPFPS
Sbjct: 181 LWQAYVSVNKIFADRIMEVINPEDDYVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPS 240
Query: 239 SEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGR 298
SEIYKTLPIREE+LRALLN+DLIGFHTFDYARHFLSCCSRMLGL+YESKRGYIG+EYYGR
Sbjct: 241 SEIYKTLPIREELLRALLNADLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGIEYYGR 300
Query: 299 TVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKL 358
TVSIKILPVGIHMGQLQSVLSLP TE KVSELI+QF + GK+MLLGVDD DIFKGISLKL
Sbjct: 301 TVSIKILPVGIHMGQLQSVLSLPKTEEKVSELIQQFSNNGKIMLLGVDDTDIFKGISLKL 360
Query: 359 LAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVV 418
LAMEQLLIQHPEW GKVVLVQIANPARG+GKDVKEVQAET +T +RIN+ FGKPGYDPV+
Sbjct: 361 LAMEQLLIQHPEWHGKVVLVQIANPARGKGKDVKEVQAETKATAKRINERFGKPGYDPVI 420
Query: 419 LIDEPLKFYERIAYYVVAECCLVTAVRDGSE----------------------PSSPKKS 456
LI+EPL+FYE++AYYVVAECCLVTAVRDG +S KKS
Sbjct: 421 LIEEPLRFYEKVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGTEKLDKVLGVDASSKKS 480
Query: 457 MLVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVG 516
MLVVSEFIGCSPSLSGAIRVNPWNIDAV+DAMDSALEMAD EKQLRHEKHYRYVSTHDVG
Sbjct: 481 MLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMADSEKQLRHEKHYRYVSTHDVG 540
Query: 517 YWARSFLQDLERTCREHVRQRCWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRAI 576
YWARSFLQDLER C +HVR+R WGIGFGLSFRVVALDPNFKKLSMEHIVSAYK+T TRAI
Sbjct: 541 YWARSFLQDLERICSDHVRRRWWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKQTKTRAI 600
Query: 577 LLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGI 636
LLDYDGTLMPQASIDKSP S +I +LNSLCRD+NNMVF+VSAKSRK L EWFSPCENLGI
Sbjct: 601 LLDYDGTLMPQASIDKSPISNSIKMLNSLCRDENNMVFIVSAKSRKALTEWFSPCENLGI 660
Query: 637 AAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYED 696
AAEHGYF RL+RDEEWETC PVAD WKQIAEPVMKLYTETTDGSTIEDKETALVW YED
Sbjct: 661 AAEHGYFLRLKRDEEWETCAPVADFSWKQIAEPVMKLYTETTDGSTIEDKETALVWCYED 720
Query: 697 ADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREM 756
ADPDFGSCQAKELL+HLESVL NEPVTVKSG N VEVKPQGVNKGLVAKRLLS MQE+ M
Sbjct: 721 ADPDFGSCQAKELLNHLESVLTNEPVTVKSGLNNVEVKPQGVNKGLVAKRLLSAMQEKGM 780
Query: 757 LPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDTVEIVR 816
P+FVLC+GDDRSDEDMFEVI SS GPS+APRAEVFACTVGRKPSKAKYYLDDT IVR
Sbjct: 781 SPEFVLCIGDDRSDEDMFEVITSS--GPSMAPRAEVFACTVGRKPSKAKYYLDDTTGIVR 838
Query: 817 LMQGLACVADQMV 829
++QGLACV+DQ+V
Sbjct: 839 MVQGLACVSDQIV 851
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224101911|ref|XP_002312472.1| predicted protein [Populus trichocarpa] gi|222852292|gb|EEE89839.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1499 bits (3880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 727/852 (85%), Positives = 780/852 (91%), Gaps = 26/852 (3%)
Query: 1 MVSKSYSNLLELASGEAPSFGRMRRRIPRIMTVAGIISDLDDDPADSVCSDPSSSSVQRD 60
MVS+SYSNLLELASGE+PSF RM RRIPRIMTVAGI+SD+DDDP++SVCSDPSSSSVQ
Sbjct: 1 MVSRSYSNLLELASGESPSFERMNRRIPRIMTVAGIMSDIDDDPSESVCSDPSSSSVQMC 60
Query: 61 RIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVN 120
RIIIVANQLPIRAQRKSD SK WIF+WDENSLLLQLKDGLGDD+IEVIYVGCLKEE+H++
Sbjct: 61 RIIIVANQLPIRAQRKSDGSKSWIFNWDENSLLLQLKDGLGDDEIEVIYVGCLKEEVHLS 120
Query: 121 EQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLW 180
EQ+EVSQ LL+TFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLW
Sbjct: 121 EQEEVSQTLLETFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLW 180
Query: 181 QAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240
QAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKR N+VKLGFFLHSPFPSSE
Sbjct: 181 QAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRCNKVKLGFFLHSPFPSSE 240
Query: 241 IYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTV 300
IYKTLPIREE+LRALLNSDLIGFHTFDYARHFLSCCSRMLGL+YESKRGY+G+EY GRTV
Sbjct: 241 IYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYMGIEYCGRTV 300
Query: 301 SIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLA 360
SIKILPVGIHMGQLQSVLSLP TEAKV ELIKQF DQ ++MLLGVDDMDIFKGISLKLLA
Sbjct: 301 SIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLA 360
Query: 361 MEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLI 420
MEQLL+QHPEWQG +VLVQIANPARG+GKDVKEVQAET++ V+RIN+TFGKPGYDP+VLI
Sbjct: 361 MEQLLVQHPEWQGNIVLVQIANPARGKGKDVKEVQAETHAVVKRINETFGKPGYDPIVLI 420
Query: 421 DEPLKFYERIAYYVVAECCLVTAVRD-----------------------GSEPSSPKKSM 457
D PLKFYE++AYYVVAECCLVTAVRD G EPS+PKKSM
Sbjct: 421 DAPLKFYEKVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNDRLNKLLGQEPSTPKKSM 480
Query: 458 LVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGY 517
LV+SEFIGCSPSLSGAIRVNPWNIDAV+DAMD ALEMAD EKQLRHEKHYRYVSTHDVGY
Sbjct: 481 LVISEFIGCSPSLSGAIRVNPWNIDAVADAMDCALEMADPEKQLRHEKHYRYVSTHDVGY 540
Query: 518 WARSFLQDLERTCREHVRQRCWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRAIL 577
WARSF QDLERTCR H R+RCWGIGFGLSFRVVALDPNFKKLSME IVSAYKRTTTRAIL
Sbjct: 541 WARSFFQDLERTCRNHSRRRCWGIGFGLSFRVVALDPNFKKLSMERIVSAYKRTTTRAIL 600
Query: 578 LDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIA 637
LDYDGTLMPQASIDKSP+SK+I I+NSLCRDKNNMVFLVSA+SRK +AEWFS C LG+A
Sbjct: 601 LDYDGTLMPQASIDKSPSSKSIGIINSLCRDKNNMVFLVSARSRKKVAEWFSQCVRLGLA 660
Query: 638 AEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDA 697
AEHGYF RL RD EWETC+PVAD WKQIAEPVM+LYTETTDGST+EDKETALVW YEDA
Sbjct: 661 AEHGYFLRLMRDAEWETCVPVADTTWKQIAEPVMQLYTETTDGSTVEDKETALVWCYEDA 720
Query: 698 DPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREML 757
DPDFGSCQAKELLDHLESVLANEPVTVKSGQN+VEVKPQGV+KGLVAKRLLS MQE E+
Sbjct: 721 DPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSIMQENEIS 780
Query: 758 PDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDTVEIVRL 817
PDFVLC+GDDRSD+DMFEVI +SM AEVFACTVG+KPSKAKYYLDDT EIVRL
Sbjct: 781 PDFVLCIGDDRSDDDMFEVITTSMTA---TQNAEVFACTVGQKPSKAKYYLDDTAEIVRL 837
Query: 818 MQGLACVADQMV 829
MQGLA V++Q +
Sbjct: 838 MQGLASVSEQTL 849
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224108257|ref|XP_002314777.1| predicted protein [Populus trichocarpa] gi|222863817|gb|EEF00948.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1497 bits (3876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 728/852 (85%), Positives = 779/852 (91%), Gaps = 37/852 (4%)
Query: 1 MVSKSYSNLLELASGEAPSFGRMRRRIPRIMTVAGIISDLDDDPADSVCSDPSSSSVQRD 60
MVS+SYSNLLELASGE+PSFGRM RRIPRIMTVAGI+SD+DDDP++SVCSDPSSSS +D
Sbjct: 1 MVSRSYSNLLELASGESPSFGRMSRRIPRIMTVAGIMSDIDDDPSESVCSDPSSSSTPKD 60
Query: 61 RIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVN 120
RIIIVANQLPIRAQRKSD SK WIFSWDENSLLLQLKDGLGDD+IEVIYVGCLKEE+H N
Sbjct: 61 RIIIVANQLPIRAQRKSDGSKSWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEVHPN 120
Query: 121 EQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLW 180
EQDEVSQILL+TFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLW
Sbjct: 121 EQDEVSQILLETFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLW 180
Query: 181 QAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240
QAYVSVNKIFADRIMEVINPEDDFVWVHDYHLM LPTFLRKRFN+VKLGFFLHSPFPSSE
Sbjct: 181 QAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMALPTFLRKRFNKVKLGFFLHSPFPSSE 240
Query: 241 IYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTV 300
IYKTLPIREE+LRALLNSDLIGFHTFDYARHFLSCCSRMLGL+YESKRGYIG+EY GRT
Sbjct: 241 IYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGIEYCGRT- 299
Query: 301 SIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLA 360
LQSVLSLP TEAKV ELIKQF DQ ++MLLGVDDMDIFKGISLKLLA
Sbjct: 300 -------------LQSVLSLPETEAKVKELIKQFSDQDRIMLLGVDDMDIFKGISLKLLA 346
Query: 361 MEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLI 420
MEQLL+QHPEWQGK+VLVQIANPARG+GKDVKEVQAET++ V+RIN+TFGKPGYDP+VLI
Sbjct: 347 MEQLLMQHPEWQGKIVLVQIANPARGKGKDVKEVQAETHAAVKRINETFGKPGYDPIVLI 406
Query: 421 DEPLKFYERIAYYVVAECCLVTAVRDG-----------------------SEPSSPKKSM 457
D PLKFYE++AYYVVAECCLVTAVRDG EPS+PKKSM
Sbjct: 407 DAPLKFYEKVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNDRLNKLLGQEPSTPKKSM 466
Query: 458 LVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGY 517
LV+SEFIGCSPSLSGAIRVNPWNIDAV+DAMD ALEMA+ EKQLRHEKHYRYVSTHDVGY
Sbjct: 467 LVISEFIGCSPSLSGAIRVNPWNIDAVADAMDFALEMAEPEKQLRHEKHYRYVSTHDVGY 526
Query: 518 WARSFLQDLERTCREHVRQRCWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRAIL 577
WARSFLQDLERTCR+H R+RCWGIGFGLSFRVVALDPNFKKLSME IVSAYKRTTTRAIL
Sbjct: 527 WARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPNFKKLSMERIVSAYKRTTTRAIL 586
Query: 578 LDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIA 637
LDYDGTLMPQASIDKSP+SK+IDI+N+LCRDKNNMVFLVSA+SR T+AEWFS CE LG+A
Sbjct: 587 LDYDGTLMPQASIDKSPSSKSIDIINNLCRDKNNMVFLVSARSRNTVAEWFSECEKLGLA 646
Query: 638 AEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDA 697
AEHGYF RL+RD EWET +PVAD WKQIAEPVM+LYTETTDGSTIEDKET+LVW YEDA
Sbjct: 647 AEHGYFLRLKRDAEWETRVPVADTTWKQIAEPVMQLYTETTDGSTIEDKETSLVWCYEDA 706
Query: 698 DPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREML 757
DPDFGSCQAKELLDHLESVLANEPVTVKSGQN+VEVKPQGV+KGLVAKRLLS MQE EM
Sbjct: 707 DPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSIMQENEMS 766
Query: 758 PDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDTVEIVRL 817
PDFVLC+GDDRSDEDMFEVI +SMAGPSIA AEVFACTVGRKPSKAKYYLDDT EIVRL
Sbjct: 767 PDFVLCIGDDRSDEDMFEVITTSMAGPSIAENAEVFACTVGRKPSKAKYYLDDTAEIVRL 826
Query: 818 MQGLACVADQMV 829
MQGLA V++Q++
Sbjct: 827 MQGLASVSEQVL 838
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356521161|ref|XP_003529226.1| PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1489 bits (3855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 720/853 (84%), Positives = 776/853 (90%), Gaps = 27/853 (3%)
Query: 1 MVSKSYSNLLELASGEAPSFGRMRRRIPRIMTVAGIISDLDDDPADSVCSDPSSSSVQRD 60
MVSKSYSNLLELASGEAPSFG M RRIPRIMTVAG+ISD+DDDP +SVCSDPSSS+ RD
Sbjct: 1 MVSKSYSNLLELASGEAPSFGYMNRRIPRIMTVAGLISDVDDDPVESVCSDPSSSTAHRD 60
Query: 61 RIIIVANQLPIRAQRKSD-NSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHV 119
RII+VANQLPIRAQR+ D N W F WDEN+LL QLKDGLGDDDIEVIYVGCLKEE+H
Sbjct: 61 RIIMVANQLPIRAQRRPDGNRSCWSFEWDENALL-QLKDGLGDDDIEVIYVGCLKEEVHP 119
Query: 120 NEQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSL 179
+EQDEVSQ LL+TFKC+PTFLP D F++YYHGFCKQQLWPLFHYMLPLSP+LGGRFNRSL
Sbjct: 120 SEQDEVSQTLLETFKCIPTFLPADQFTKYYHGFCKQQLWPLFHYMLPLSPELGGRFNRSL 179
Query: 180 WQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSS 239
WQAYVSVNKIFADRIMEVINPEDD+VW+HDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSS
Sbjct: 180 WQAYVSVNKIFADRIMEVINPEDDYVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSS 239
Query: 240 EIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRT 299
EIYKTLP+REEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIG+EYYGRT
Sbjct: 240 EIYKTLPVREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGIEYYGRT 299
Query: 300 VSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLL 359
VSIKILPVGIH+GQLQSVL +P TE KV ELI+QF D+G+ +LLGVDDMDIFKGISLKLL
Sbjct: 300 VSIKILPVGIHLGQLQSVLRMPQTEEKVCELIRQFSDKGRTLLLGVDDMDIFKGISLKLL 359
Query: 360 AMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVL 419
AMEQLLIQHPE++ KVVLVQIANPARGRGKDVKEVQAET +TV+RIN+TFGKPG+DPV+L
Sbjct: 360 AMEQLLIQHPEYREKVVLVQIANPARGRGKDVKEVQAETKATVKRINETFGKPGFDPVIL 419
Query: 420 IDEPLKFYERIAYYVVAECCLVTAVRDGSE----------------------PSSP-KKS 456
I+EPLKFYER+AYYVVAECCLVTAVRDG SSP KKS
Sbjct: 420 IEEPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEMLDAVLGLASSPKKKS 479
Query: 457 MLVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVG 516
MLVVSEFIGCSPSLSGAIRVNPWNIDAV+DAMDSALEMAD EK+LRHEKHYRYVSTHDVG
Sbjct: 480 MLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMADSEKELRHEKHYRYVSTHDVG 539
Query: 517 YWARSFLQDLERTCREHVRQRCWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRAI 576
YWARSFLQDLERTC +HVR+R WGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRT TRAI
Sbjct: 540 YWARSFLQDLERTCSDHVRRRWWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTATRAI 599
Query: 577 LLDYDGTLMPQAS-IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLG 635
LLDYDGTLMPQ+S IDKSP+SK+I+IL+SLCRDKNNMVFLVSA+SRK L+EWFSPCENLG
Sbjct: 600 LLDYDGTLMPQSSTIDKSPSSKSIEILSSLCRDKNNMVFLVSARSRKMLSEWFSPCENLG 659
Query: 636 IAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYE 695
+AAEHGYF R++RDEEWET + D WKQIAEPVMKLYTETTDGSTIEDKETALVW YE
Sbjct: 660 VAAEHGYFLRMKRDEEWETHVAATDTSWKQIAEPVMKLYTETTDGSTIEDKETALVWCYE 719
Query: 696 DADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQERE 755
DADPDFGSCQAKELLDHLESVLANEPVTVKS QN VEVKPQGV+KGLVA RLLS MQE+
Sbjct: 720 DADPDFGSCQAKELLDHLESVLANEPVTVKSDQNNVEVKPQGVSKGLVATRLLSAMQEKG 779
Query: 756 MLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDTVEIV 815
M PDFVLC+GDDRSDEDMFEVI SSM G IAP+AEVFACTV RKPSKAKYYLDDT EIV
Sbjct: 780 MCPDFVLCIGDDRSDEDMFEVITSSMGG-LIAPKAEVFACTVCRKPSKAKYYLDDTTEIV 838
Query: 816 RLMQGLACVADQM 828
RL+QGLACV++Q+
Sbjct: 839 RLLQGLACVSEQI 851
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|12324075|gb|AAG52003.1|AC012563_13 putative trehalose-6-phosphate synthase; 46897-44149 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1457 bits (3772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 697/855 (81%), Positives = 766/855 (89%), Gaps = 32/855 (3%)
Query: 1 MVSKSYSNLLELASGEAPSFGRMRRRIPRIMTVAGIISDLDDDPADSVCSDPSSSSVQRD 60
MVS+SYSNLLELASG++P+FGRM R+IPRIM VAGI+S++D+D D+ S +D
Sbjct: 1 MVSRSYSNLLELASGDSPTFGRMNRQIPRIMAVAGIMSNIDNDSKDTDLS-------PKD 53
Query: 61 RIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVN 120
RIIIVAN+LPIRAQR+ D + GW FSWDENSLLLQLKDGLGD+ IEVIYVGCLKEEI +N
Sbjct: 54 RIIIVANELPIRAQRRVDGN-GWNFSWDENSLLLQLKDGLGDEAIEVIYVGCLKEEIPLN 112
Query: 121 EQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLW 180
EQ+EV QILL++FKCVPTFLP DL++RYYHGFCKQQLWPLFHYMLPLSPDLGGRF+R+LW
Sbjct: 113 EQEEVYQILLESFKCVPTFLPLDLYTRYYHGFCKQQLWPLFHYMLPLSPDLGGRFDRTLW 172
Query: 181 QAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240
QAYVSVNKIFADRIMEVINPEDDFVW+HDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE
Sbjct: 173 QAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 232
Query: 241 IYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTV 300
IYKTLPIREE+LRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTV
Sbjct: 233 IYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTV 292
Query: 301 SIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLA 360
SIKILPVGIHMGQLQSVLSLP TE KV ELI+++ +G+ MLLGVDDMDIFKGI+LKLLA
Sbjct: 293 SIKILPVGIHMGQLQSVLSLPETERKVGELIERYGRKGRTMLLGVDDMDIFKGITLKLLA 352
Query: 361 MEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLI 420
MEQLL+QHPEWQGKVVLVQIANPARG+GKDVKE+QAETYSTV+RIN+TFG+PGYDP+VLI
Sbjct: 353 MEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEMQAETYSTVKRINETFGRPGYDPIVLI 412
Query: 421 DEPLKFYERIAYYVVAECCLVTAVRDG------------------------SEPSSPKKS 456
D PLKFYER+AYYVVAECCLVTAVRDG + KKS
Sbjct: 413 DAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIVSRQGNEKLDKILKLEANNRNKKS 472
Query: 457 MLVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVG 516
MLVVSEFIGCSPSLSGAIRVNPWN+DAV+DAMDSALE+A+ EKQLRHEKHY+YVSTHDVG
Sbjct: 473 MLVVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALEVAEPEKQLRHEKHYKYVSTHDVG 532
Query: 517 YWARSFLQDLERTCREHVRQRCWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRAI 576
YWARSFLQDLER+C EH R+RCWGIGFGLSFRVVALD +F+KLSMEHIVSAYKRT TRAI
Sbjct: 533 YWARSFLQDLERSCGEHGRRRCWGIGFGLSFRVVALDQSFRKLSMEHIVSAYKRTKTRAI 592
Query: 577 LLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGI 636
LLDYD TLMPQ SIDK P+SK+IDILN+LCRDK N+VF+VSAKSR+TL++WFSPCE LGI
Sbjct: 593 LLDYDDTLMPQGSIDKRPSSKSIDILNTLCRDKGNLVFIVSAKSRETLSDWFSPCEKLGI 652
Query: 637 AAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYED 696
AAEHGYF RLR+ EWE C+ DC WKQIAEPVM+LYTETTDGSTIEDKETALVWSYED
Sbjct: 653 AAEHGYFLRLRKAVEWENCVAAVDCSWKQIAEPVMELYTETTDGSTIEDKETALVWSYED 712
Query: 697 ADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREM 756
ADPDFGSCQAKELLDHLESVLANEPVTVK GQN VEVKPQGV+KGL+A+R+LS MQER
Sbjct: 713 ADPDFGSCQAKELLDHLESVLANEPVTVKRGQNYVEVKPQGVSKGLIARRMLSMMQERGT 772
Query: 757 LPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDTVEIVR 816
LP+FVLC+GDDRSDEDMFEVI SS GPSIAPRAE+FACTVG+KPSKAKYYLDDT EIVR
Sbjct: 773 LPEFVLCIGDDRSDEDMFEVICSSTEGPSIAPRAEIFACTVGQKPSKAKYYLDDTTEIVR 832
Query: 817 LMQGLACVADQMVPV 831
LM GLA V DQ+ PV
Sbjct: 833 LMHGLASVTDQITPV 847
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|42572029|ref|NP_974105.1| alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 [Arabidopsis thaliana] gi|172045841|sp|Q94AH8.2|TPS6_ARATH RecName: Full=Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6; AltName: Full=Trehalose-6-phosphate synthase 6; Short=AtTPS6 gi|332196617|gb|AEE34738.1| alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1455 bits (3766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 698/867 (80%), Positives = 767/867 (88%), Gaps = 43/867 (4%)
Query: 1 MVSKSYSNLLELASGEAPSFGRMRRRIPRIMTVAGIISDLDDDPADSVCSDPSSSSVQRD 60
MVS+SYSNLLELASG++P+FGRM R+IPRIM VAGI+S++D+D D+ S +D
Sbjct: 1 MVSRSYSNLLELASGDSPTFGRMNRQIPRIMAVAGIMSNIDNDSKDTDLS-------PKD 53
Query: 61 RIIIVANQLPIRAQRKSDNS------------KGWIFSWDENSLLLQLKDGLGDDDIEVI 108
RIIIVAN+LPIRAQR+ D + KGW FSWDENSLLLQLKDGLGD+ IEVI
Sbjct: 54 RIIIVANELPIRAQRRVDGNGSGSSSSSTCCSKGWNFSWDENSLLLQLKDGLGDEAIEVI 113
Query: 109 YVGCLKEEIHVNEQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLS 168
YVGCLKEEI +NEQ+EV QILL++FKCVPTFLP DL++RYYHGFCKQQLWPLFHYMLPLS
Sbjct: 114 YVGCLKEEIPLNEQEEVYQILLESFKCVPTFLPLDLYTRYYHGFCKQQLWPLFHYMLPLS 173
Query: 169 PDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKL 228
PDLGGRF+R+LWQAYVSVNKIFADRIMEVINPEDDFVW+HDYHLMVLPTFLRKRFNRVKL
Sbjct: 174 PDLGGRFDRTLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKL 233
Query: 229 GFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKR 288
GFFLHSPFPSSEIYKTLPIREE+LRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKR
Sbjct: 234 GFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKR 293
Query: 289 GYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDM 348
GYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLP TE KV ELI+++ +G+ MLLGVDDM
Sbjct: 294 GYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETERKVGELIERYGRKGRTMLLGVDDM 353
Query: 349 DIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQT 408
DIFKGI+LKLLAMEQLL+QHPEWQGKVVLVQIANPARG+GKDVKE+QAETYSTV+RIN+T
Sbjct: 354 DIFKGITLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEMQAETYSTVKRINET 413
Query: 409 FGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDG--------------------- 447
FG+PGYDP+VLID PLKFYER+AYYVVAECCLVTAVRDG
Sbjct: 414 FGRPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIVSRQGNEKLDKI 473
Query: 448 ---SEPSSPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHE 504
+ KKSMLVVSEFIGCSPSLSGAIRVNPWN+DAV+DAMDSALE+A+ EKQLRHE
Sbjct: 474 LKLEANNRNKKSMLVVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALEVAEPEKQLRHE 533
Query: 505 KHYRYVSTHDVGYWARSFLQDLERTCREHVRQRCWGIGFGLSFRVVALDPNFKKLSMEHI 564
KHY+YVSTHDVGYWARSFLQDLER+C EH R+RCWGIGFGLSFRVVALD +F+KLSMEHI
Sbjct: 534 KHYKYVSTHDVGYWARSFLQDLERSCGEHGRRRCWGIGFGLSFRVVALDQSFRKLSMEHI 593
Query: 565 VSAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTL 624
VSAYKRT TRAILLDYD TLMPQ SIDK P+SK+IDILN+LCRDK N+VF+VSAKSR+TL
Sbjct: 594 VSAYKRTKTRAILLDYDDTLMPQGSIDKRPSSKSIDILNTLCRDKGNLVFIVSAKSRETL 653
Query: 625 AEWFSPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIE 684
++WFSPCE LGIAAEHGYF RLR+ EWE C+ DC WKQIAEPVM+LYTETTDGSTIE
Sbjct: 654 SDWFSPCEKLGIAAEHGYFLRLRKAVEWENCVAAVDCSWKQIAEPVMELYTETTDGSTIE 713
Query: 685 DKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVA 744
DKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVK GQN VEVKPQGV+KGL+A
Sbjct: 714 DKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKRGQNYVEVKPQGVSKGLIA 773
Query: 745 KRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKA 804
+R+LS MQER LP+FVLC+GDDRSDEDMFEVI SS GPSIAPRAE+FACTVG+KPSKA
Sbjct: 774 RRMLSMMQERGTLPEFVLCIGDDRSDEDMFEVICSSTEGPSIAPRAEIFACTVGQKPSKA 833
Query: 805 KYYLDDTVEIVRLMQGLACVADQMVPV 831
KYYLDDT EIVRLM GLA V DQ+ PV
Sbjct: 834 KYYLDDTTEIVRLMHGLASVTDQITPV 860
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|297841523|ref|XP_002888643.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297334484|gb|EFH64902.1| predicted protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1455 bits (3766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 699/864 (80%), Positives = 771/864 (89%), Gaps = 40/864 (4%)
Query: 1 MVSKSYSNLLELASGEAPSFGRMRRRIPRIMTVAGIISDLDDDPADSVCSDPSSSSVQRD 60
MVS+SYSNLLELASG++P+FGRM R+IPRIM VAGI+S++D+D ++ S +D
Sbjct: 1 MVSRSYSNLLELASGDSPTFGRMNRQIPRIMAVAGIMSNIDNDSKETDLS-------PKD 53
Query: 61 RIIIVANQLPIRAQRKSDNS---------KGWIFSWDENSLLLQLKDGLGDDDIEVIYVG 111
RIIIVAN+LPIRAQR+ + S KGW FSWDENSLLLQLKDGLGD+ IEVIYVG
Sbjct: 54 RIIIVANELPIRAQRRLEGSGSSTSTCCSKGWNFSWDENSLLLQLKDGLGDEAIEVIYVG 113
Query: 112 CLKEEIHVNEQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDL 171
CLKEEI +NEQ+EV Q+LL++FKCVPTFLP DL++RYYHGFCKQQLWPLFHYMLPLSPDL
Sbjct: 114 CLKEEIPLNEQEEVYQVLLESFKCVPTFLPLDLYTRYYHGFCKQQLWPLFHYMLPLSPDL 173
Query: 172 GGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFF 231
GGRF+R+LWQAYVSVNKIFADRIMEVINPEDDFVW+HDYHLMVLPTFLRKRFNRVKLGFF
Sbjct: 174 GGRFDRALWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFF 233
Query: 232 LHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYI 291
LHSPFPSSEIYKTLPIREE+LRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYI
Sbjct: 234 LHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYI 293
Query: 292 GLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIF 351
GLEYYGRTVSIKILPVGIHMGQLQSVLSLP TE KV ELI+++ +G+ MLLGVDDMDIF
Sbjct: 294 GLEYYGRTVSIKILPVGIHMGQLQSVLSLPETERKVGELIERYGRKGRTMLLGVDDMDIF 353
Query: 352 KGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGK 411
KGI+LKLLAMEQLL+QHPEWQGKVVLVQIANPARG+GKDVKE+QAETYSTV+RIN+TFG+
Sbjct: 354 KGITLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEMQAETYSTVKRINETFGR 413
Query: 412 PGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGS----------------------- 448
PGYDP+VLID PLKFYER+AYYVVAECCLVTAVRDG
Sbjct: 414 PGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIVSRQGNEKLDKILKL 473
Query: 449 EPSS-PKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHY 507
EP++ KKSMLVVSEFIGCSPSLSGAIRVNPWN+DAV+DAMDSALE+A+ EKQLRHEKHY
Sbjct: 474 EPNNHNKKSMLVVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALEVAEPEKQLRHEKHY 533
Query: 508 RYVSTHDVGYWARSFLQDLERTCREHVRQRCWGIGFGLSFRVVALDPNFKKLSMEHIVSA 567
+YVSTHDVGYWARSFLQDLER+C EH R+RCWGIGFGLSFRVVALD +F+KLSMEHIVSA
Sbjct: 534 KYVSTHDVGYWARSFLQDLERSCGEHGRRRCWGIGFGLSFRVVALDQSFRKLSMEHIVSA 593
Query: 568 YKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEW 627
YKRT TRAILLDYD TLMPQ SIDK P+SK+IDILN+LCRDK N+VF+VSAKSR+TL++W
Sbjct: 594 YKRTKTRAILLDYDDTLMPQGSIDKRPSSKSIDILNTLCRDKGNLVFIVSAKSRETLSDW 653
Query: 628 FSPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKE 687
FSPCE LGIAAEHGYF RLR+ EWE C+ ADC WKQIAEPVM+LYTETTDGSTIEDKE
Sbjct: 654 FSPCEKLGIAAEHGYFLRLRKAVEWENCVAAADCSWKQIAEPVMELYTETTDGSTIEDKE 713
Query: 688 TALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRL 747
TALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVK GQN VEVKPQGV+KGL+A+R+
Sbjct: 714 TALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKRGQNYVEVKPQGVSKGLIARRM 773
Query: 748 LSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYY 807
LS MQER LP+FVLC+GDDRSDEDMFEVI SS GPSIAPRAE+FACTVG+KPSKAKYY
Sbjct: 774 LSMMQERGTLPEFVLCIGDDRSDEDMFEVICSSTEGPSIAPRAEIFACTVGQKPSKAKYY 833
Query: 808 LDDTVEIVRLMQGLACVADQMVPV 831
LDDT EIVRLM GLA V DQ+ PV
Sbjct: 834 LDDTTEIVRLMHGLASVTDQITPV 857
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|351629998|gb|AEQ54916.1| trehalose-6-phosphate synthase [Salvia miltiorrhiza] | Back alignment and taxonomy information |
|---|
Score = 1447 bits (3747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 708/856 (82%), Positives = 772/856 (90%), Gaps = 25/856 (2%)
Query: 1 MVSKSYSNLLELASGEAPS--FGRMRRRIPRIMTVAGIISDLDDDPADSVCSDPSSSSVQ 58
MVS+SYSNLLELASGEAPS F RM RRIPRIMTVAGI+SD+DDD +DSV SDPSSSS Q
Sbjct: 1 MVSRSYSNLLELASGEAPSPSFSRMSRRIPRIMTVAGIMSDIDDDGSDSVSSDPSSSSSQ 60
Query: 59 RDRIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIH 118
+DRIIIVANQLPI+ +K+DNSKGW FSWD+NSL LQLKD LGD+D E IYVGCLKEEIH
Sbjct: 61 KDRIIIVANQLPIKVHKKTDNSKGWTFSWDDNSLYLQLKDCLGDEDTEFIYVGCLKEEIH 120
Query: 119 VNEQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRS 178
N+QDEVSQILL+TFKC+PTFLPPDL+SRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRS
Sbjct: 121 PNDQDEVSQILLETFKCIPTFLPPDLYSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRS 180
Query: 179 LWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPS 238
WQAYVSVNKIFADRIMEVINPEDD+VWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPS
Sbjct: 181 SWQAYVSVNKIFADRIMEVINPEDDYVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPS 240
Query: 239 SEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGR 298
SEIYKTLPIREEILR LLNSDLIGFHTFDYARHFLSCCSRMLG++YESKRGYIGL+YYGR
Sbjct: 241 SEIYKTLPIREEILRGLLNSDLIGFHTFDYARHFLSCCSRMLGISYESKRGYIGLDYYGR 300
Query: 299 TVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKL 358
TVSIKILPVGIHMGQLQSVLSLP TEAKV+EL+KQF QG+ MLLGVDDMDIFKGISLKL
Sbjct: 301 TVSIKILPVGIHMGQLQSVLSLPETEAKVAELVKQFSGQGRTMLLGVDDMDIFKGISLKL 360
Query: 359 LAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVV 418
LAMEQLL+QHPE +GKVVLVQIA PARG+GKDVKEVQ ETY+TV+RIN+TFG+PGYDPV+
Sbjct: 361 LAMEQLLLQHPEKKGKVVLVQIALPARGKGKDVKEVQDETYATVKRINETFGEPGYDPVI 420
Query: 419 LIDEPLKFYERIAYYVVAECCLVTAVRD-----------------------GSEPSSPKK 455
LID+P KFYER+AYYV AECCLVTAVRD G E S+PKK
Sbjct: 421 LIDQPPKFYERVAYYVAAECCLVTAVRDGMNLIPYEYVISRQGNERLDKILGPEASTPKK 480
Query: 456 SMLVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDV 515
SMLVVSEFIGCSPSLSGAIRVNPWNID V++AM+SA+ MA+ EKQLRHEKHY+YVSTHDV
Sbjct: 481 SMLVVSEFIGCSPSLSGAIRVNPWNIDVVAEAMESAIVMAEPEKQLRHEKHYKYVSTHDV 540
Query: 516 GYWARSFLQDLERTCREHVRQRCWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRA 575
YW +SFLQDLERTC++HVR+RCWGIGFGLSFRVVALDPNF+KL+MEHIVSAYKRTTTRA
Sbjct: 541 SYWGKSFLQDLERTCKDHVRRRCWGIGFGLSFRVVALDPNFRKLAMEHIVSAYKRTTTRA 600
Query: 576 ILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLG 635
ILLDYDGTLMPQ SIDK P+SKT+DILNSLCRDKNN+VF+VS++ R L WFS CE LG
Sbjct: 601 ILLDYDGTLMPQNSIDKKPSSKTLDILNSLCRDKNNVVFIVSSRPRDKLDAWFSSCEKLG 660
Query: 636 IAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYE 695
IAAEHGYF R++RDEEWET IP +C WKQIAEPVM+LYTETTDGS IE KET++ W YE
Sbjct: 661 IAAEHGYFMRMKRDEEWETSIPAVECNWKQIAEPVMQLYTETTDGSMIELKETSMGWCYE 720
Query: 696 DADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQERE 755
DADPDFGSCQAKELLDHLESVLANEPVTVKS N VEVKPQGV+KGLVAKRLLS+MQER
Sbjct: 721 DADPDFGSCQAKELLDHLESVLANEPVTVKSDSNCVEVKPQGVSKGLVAKRLLSSMQERG 780
Query: 756 MLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDTVEIV 815
MLPDFVLC+GDDRSDEDMFEVI SS GPSIAP AEVFACTVGRKPSKAKYYLDDT EIV
Sbjct: 781 MLPDFVLCIGDDRSDEDMFEVISSSTTGPSIAPLAEVFACTVGRKPSKAKYYLDDTAEIV 840
Query: 816 RLMQGLACVADQMVPV 831
RLM+GLACV++ M+P+
Sbjct: 841 RLMKGLACVSELMIPI 856
|
Source: Salvia miltiorrhiza Species: Salvia miltiorrhiza Genus: Salvia Family: Lamiaceae Order: Lamiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 831 | ||||||
| TAIR|locus:2200216 | 860 | ATTPS6 [Arabidopsis thaliana ( | 0.529 | 0.511 | 0.790 | 0.0 | |
| TAIR|locus:2129425 | 862 | TPS5 "trehalose phosphatase/sy | 0.558 | 0.538 | 0.680 | 0.0 | |
| TAIR|locus:2202290 | 851 | TPS7 "trehalose-phosphatase/sy | 0.558 | 0.545 | 0.591 | 3.3e-292 | |
| TAIR|locus:2199847 | 867 | TPS9 "trehalose-phosphatase/sy | 0.531 | 0.509 | 0.606 | 1.9e-287 | |
| TAIR|locus:2016179 | 856 | TPS8 "trehalose-6-phosphatase | 0.529 | 0.514 | 0.606 | 1.5e-285 | |
| TAIR|locus:2195678 | 861 | TPS10 "trehalose phosphate syn | 0.531 | 0.513 | 0.601 | 3.4e-279 | |
| TAIR|locus:2054027 | 862 | TPS11 "trehalose phosphatase/s | 0.458 | 0.441 | 0.601 | 1.5e-256 | |
| DICTYBASE|DDB_G0287657 | 733 | tpsA "alpha,alpha-trehalose-ph | 0.744 | 0.844 | 0.347 | 1.6e-117 | |
| TAIR|locus:2202990 | 942 | TPS1 "trehalose-6-phosphate sy | 0.856 | 0.755 | 0.346 | 6.2e-112 | |
| DICTYBASE|DDB_G0284975 | 790 | tpsB "alpha,alpha-trehalose-ph | 0.806 | 0.848 | 0.333 | 7.8e-110 |
| TAIR|locus:2200216 ATTPS6 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1874 (664.7 bits), Expect = 0., Sum P(2) = 0.
Identities = 363/459 (79%), Positives = 395/459 (86%)
Query: 1 MVSKSYSNLLELASGEAPSFGRMRRRIPRIMTVAGIIXXXXXXXXXXXXXXXXXXXXXXX 60
MVS+SYSNLLELASG++P+FGRM R+IPRIM VAGI+
Sbjct: 1 MVSRSYSNLLELASGDSPTFGRMNRQIPRIMAVAGIMSNIDNDSKDTDLSPKDR------ 54
Query: 61 XIIIVANQLPIRAQRKSDN------------SKGWIFSWDENSXXXXXXXXXXXXXIEVI 108
IIIVAN+LPIRAQR+ D SKGW FSWDENS IEVI
Sbjct: 55 -IIIVANELPIRAQRRVDGNGSGSSSSSTCCSKGWNFSWDENSLLLQLKDGLGDEAIEVI 113
Query: 109 YVGCLKEEIHVNEQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLS 168
YVGCLKEEI +NEQ+EV QILL++FKCVPTFLP DL++RYYHGFCKQQLWPLFHYMLPLS
Sbjct: 114 YVGCLKEEIPLNEQEEVYQILLESFKCVPTFLPLDLYTRYYHGFCKQQLWPLFHYMLPLS 173
Query: 169 PDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKL 228
PDLGGRF+R+LWQAYVSVNKIFADRIMEVINPEDDFVW+HDYHLMVLPTFLRKRFNRVKL
Sbjct: 174 PDLGGRFDRTLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKL 233
Query: 229 GFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKR 288
GFFLHSPFPSSEIYKTLPIREE+LRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKR
Sbjct: 234 GFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKR 293
Query: 289 GYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDM 348
GYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLP TE KV ELI+++ +G+ MLLGVDDM
Sbjct: 294 GYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETERKVGELIERYGRKGRTMLLGVDDM 353
Query: 349 DIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQT 408
DIFKGI+LKLLAMEQLL+QHPEWQGKVVLVQIANPARG+GKDVKE+QAETYSTV+RIN+T
Sbjct: 354 DIFKGITLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEMQAETYSTVKRINET 413
Query: 409 FGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDG 447
FG+PGYDP+VLID PLKFYER+AYYVVAECCLVTAVRDG
Sbjct: 414 FGRPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDG 452
|
|
| TAIR|locus:2129425 TPS5 "trehalose phosphatase/synthase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1677 (595.4 bits), Expect = 0., Sum P(2) = 0.
Identities = 328/482 (68%), Positives = 384/482 (79%)
Query: 1 MVSKSYSNLLELASGEAPSFGRMRRRIPRIMTVAGIIXXXXXXXXXXXXXXXXXXXXXXX 60
MVS+SYSNLL+LASG SF R ++R PR+ TV G++
Sbjct: 1 MVSRSYSNLLDLASGNFHSFSREKKRFPRVATVTGVLSELDDDNNSNSVCSDAPSSVTQD 60
Query: 61 XIIIVANQLPIRAQRKSDNSKGWI-FSWDENSXXXXXXXXXXXXXIEVIYVGCLKEEIHV 119
IIIV NQLPI++ R NS G + FSWD N +EV+Y+GCLKE+I
Sbjct: 61 RIIIVGNQLPIKSHR---NSAGKLSFSWD-NDSLLLQLKDGMREDMEVVYIGCLKEQIDT 116
Query: 120 NEQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSL 179
EQD+VSQ LL+ FKCVP ++PP+LF++YYHGFCKQ LWPLFHYMLPL+PDLGGRF+RSL
Sbjct: 117 VEQDDVSQRLLENFKCVPAYIPPELFTKYYHGFCKQHLWPLFHYMLPLTPDLGGRFDRSL 176
Query: 180 WQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSS 239
WQAY+SVNKIFAD++MEVI+P+DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSS
Sbjct: 177 WQAYLSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSS 236
Query: 240 EIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRT 299
EIY+TLP+R E+LRALLN+DLIGFHTFDYARHFLSCCSRMLGL+Y+SKRG IGLEYYGRT
Sbjct: 237 EIYRTLPVRNELLRALLNADLIGFHTFDYARHFLSCCSRMLGLSYQSKRGTIGLEYYGRT 296
Query: 300 VSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLL 359
VSIKILPVGIH+ QLQS+L+LP T+ KV+EL QF DQ KV LLGVDDMDIFKGISLKLL
Sbjct: 297 VSIKILPVGIHISQLQSILNLPETQTKVAELRDQFLDQ-KV-LLGVDDMDIFKGISLKLL 354
Query: 360 AMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVL 419
AMEQLL QHPE +G+VVLVQIANPARGRGKDV+EVQ+ET +TV+RIN+ FG+PGY PVVL
Sbjct: 355 AMEQLLTQHPEKRGRVVLVQIANPARGRGKDVQEVQSETEATVKRINEMFGRPGYQPVVL 414
Query: 420 IDEPLKFYERIAYYVVAECCLVTAVRDGSEPSSPKKSMLVVSEFIGC---SPSLSGAIRV 476
ID PL+F+ERIAYYV+AECCLVTAVRDG L+ E+I C +P L+ I +
Sbjct: 415 IDTPLQFFERIAYYVIAECCLVTAVRDGMN--------LIPYEYIICRQGNPKLNETIGL 466
Query: 477 NP 478
+P
Sbjct: 467 DP 468
|
|
| TAIR|locus:2202290 TPS7 "trehalose-phosphatase/synthase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1495 (531.3 bits), Expect = 3.3e-292, Sum P(2) = 3.3e-292
Identities = 279/472 (59%), Positives = 355/472 (75%)
Query: 1 MVSKSYSNLLELASGEAPSFGRMRRRIPRIMTVAGIIXXXXXXXXXXXXXXXXXXXXXXX 60
M+S+SY+NLL+LASG P GR RRR+PR+MTV G +
Sbjct: 1 MISRSYTNLLDLASGNFPVMGRERRRLPRVMTVPGNVSEFDEDQAYSVSSDNPSSVSSDR 60
Query: 61 XIIIVANQLPIRAQRKSDNSKGWIFSWDENSXXXXXXXXXXXXXIEVIYVGCLKEEIHVN 120
+IIVAN+LP++A++++ + W FSWD++S +E++YVG L ++ N
Sbjct: 61 -MIIVANRLPLKAEKRNGS---WSFSWDQDSLYLQLKDGLPED-MEILYVGSLSVDVDSN 115
Query: 121 EQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLW 180
EQD+V+QILLD FKCVPTF PPDL S++Y GFCK+Q+WPLFHYMLP S D GGRF+RSLW
Sbjct: 116 EQDDVAQILLDKFKCVPTFFPPDLQSKFYDGFCKRQIWPLFHYMLPFSADHGGRFDRSLW 175
Query: 181 QAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240
+AYV+ NK+F +++EVINP+DDFVW+HDYHLMVLPTFLR+RFNR+++GFFLHSPFPSSE
Sbjct: 176 EAYVATNKLFFQKVIEVINPDDDFVWIHDYHLMVLPTFLRRRFNRIRMGFFLHSPFPSSE 235
Query: 241 IYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTV 300
IY++LP+REEIL+ALLNSDLIGFHTFDYARHFL+CCSRMLGL Y+SKRGYIGLEYYGRTV
Sbjct: 236 IYRSLPVREEILKALLNSDLIGFHTFDYARHFLTCCSRMLGLEYQSKRGYIGLEYYGRTV 295
Query: 301 SIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLA 360
IKI+PVGI+MG++QSV+ E KV EL +F +GK +LLG+DDMDIFKGI+LKLLA
Sbjct: 296 GIKIMPVGINMGRIQSVMRYSEEEGKVMELRNRF--EGKTVLLGIDDMDIFKGINLKLLA 353
Query: 361 MEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLI 420
MEQ+L QHP W+G+ VLVQI NPARG+G DV+E++ E + RIN FGKPGY P++ I
Sbjct: 354 MEQMLRQHPNWRGRAVLVQIVNPARGKGIDVEEIRGEIEESCRRINGEFGKPGYQPIIYI 413
Query: 421 DEPLKFYERIAYYVVAECCLVTAVRDGSEPSSPKKSMLVVSEFIGCSPSLSG 472
D P+ E AYY +AEC +VTAVRDG +P + ++ +G SG
Sbjct: 414 DTPVSINEINAYYHIAECVVVTAVRDGMN-LTPYEYIVCRQGLLGSESDFSG 464
|
|
| TAIR|locus:2199847 TPS9 "trehalose-phosphatase/synthase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1435 (510.2 bits), Expect = 1.9e-287, Sum P(2) = 1.9e-287
Identities = 271/447 (60%), Positives = 337/447 (75%)
Query: 1 MVSKSYSNLLELASGEAPSFGRMRRRIPRIMTVAGIIXXXXXXXXXXXXXXXXXXXXXXX 60
MVS+S +N L+LAS + F + +R +PR+MTV GII
Sbjct: 1 MVSRSCANFLDLASWDLLDFPQTQRALPRVMTVPGIISELDGGYSDGSSDVNSSNSSRER 60
Query: 61 XIIIVANQLPIRAQRKSDNSKGWIFSWDENSXXXXXXXXXXXXXIEVIYVGCLKEEIHVN 120
II VAN LP++A+R ++ + W FSWDE+S E +Y+G L +I ++
Sbjct: 61 KII-VANMLPLQAKRDTETGQ-WCFSWDEDSLLLQLRDGFSSDT-EFVYIGSLNADIGIS 117
Query: 121 EQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLW 180
EQ+EVS LL F CVPTFLP ++ ++Y GFCK LWPLFHYMLP+ PD G RF+R LW
Sbjct: 118 EQEEVSHKLLLDFNCVPTFLPKEMQEKFYLGFCKHHLWPLFHYMLPMFPDHGDRFDRRLW 177
Query: 181 QAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240
QAYVS NKIF+DR+MEVINPE+D+VW+HDYHLMVLPTFLRKRFNR+KLGFFLHSPFPSSE
Sbjct: 178 QAYVSANKIFSDRVMEVINPEEDYVWIHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSE 237
Query: 241 IYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTV 300
IY+TLP+R+++LR LLN DLIGFHTFDYARHFLSCCSRMLGL YESKRG+IGL+Y+GRTV
Sbjct: 238 IYRTLPVRDDLLRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTV 297
Query: 301 SIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLA 360
IKILPVGIHMG+L+SVL+LP T AK+ E+ +QF +GK ++LGVDDMDIFKGISLKL+A
Sbjct: 298 FIKILPVGIHMGRLESVLNLPSTAAKMKEIQEQF--KGKKLILGVDDMDIFKGISLKLIA 355
Query: 361 MEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLI 420
ME+L + +GK+VL+QI NPAR GKDV+E + ETYST +RIN+ +G GY PV+LI
Sbjct: 356 MERLFETYWHMRGKLVLIQIVNPARATGKDVEEAKKETYSTAKRINERYGSAGYQPVILI 415
Query: 421 DEPLKFYERIAYYVVAECCLVTAVRDG 447
D + YE+ AYY +A+CCLV AVRDG
Sbjct: 416 DRLVPRYEKTAYYAMADCCLVNAVRDG 442
|
|
| TAIR|locus:2016179 TPS8 "trehalose-6-phosphatase synthase S8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1398 (497.2 bits), Expect = 1.5e-285, Sum P(2) = 1.5e-285
Identities = 271/447 (60%), Positives = 326/447 (72%)
Query: 1 MVSKSYSNLLELASGEAPSFGRMRRRIPRIMTVAGIIXXXXXXXXXXXXXXXXXXXXXXX 60
MVS+S +N L+L+S + F + R +PR+MTV GII
Sbjct: 1 MVSRSCANFLDLSSWDLLDFPQTPRTLPRVMTVPGIITDVDGDTTSEVTSTSGGSRERK- 59
Query: 61 XIIIVANQLPIRAQRKSDNSKGWIFSWDENSXXXXXXXXXXXXXIEVIYVGCLKEEIHVN 120
IIVAN LP++++R ++ K W F+WDE+S E +YVG L +I N
Sbjct: 60 --IIVANMLPLQSKRDAETGK-WCFNWDEDSLQLQLRDGFSSET-EFLYVGSLNVDIETN 115
Query: 121 EQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLW 180
EQ+EVSQ LL+ F CV TFL +L +Y GFCK QLWPLFHYMLP+ PD G RF+R LW
Sbjct: 116 EQEEVSQKLLEEFNCVATFLSQELQEMFYLGFCKHQLWPLFHYMLPMFPDHGDRFDRRLW 175
Query: 181 QAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240
QAYVS NKIF+DR+MEVINPEDD+VW+ DYHLMVLPTFLRKRFNR+KLGFFLHSPFPSSE
Sbjct: 176 QAYVSANKIFSDRVMEVINPEDDYVWIQDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSE 235
Query: 241 IYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTV 300
IY+TLP+R+EILR LLN DLIGFHTFDYARHFLSCCSRMLGL YESKRG+IGL+Y+GRTV
Sbjct: 236 IYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTV 295
Query: 301 SIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLA 360
IKILPVG+HMG+L+SVLSL T AK E+ +QF +GK ++LG+DDMDIFKGISLKL+A
Sbjct: 296 YIKILPVGVHMGRLESVLSLDSTAAKTKEIQEQF--KGKKLVLGIDDMDIFKGISLKLIA 353
Query: 361 MEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLI 420
ME L + +GKVVLVQI NPAR GKDV+E + ETY T RIN+ +G Y P+VLI
Sbjct: 354 MEHLFETYWHLKGKVVLVQIVNPARSSGKDVEEAKRETYETARRINERYGTSDYKPIVLI 413
Query: 421 DEPLKFYERIAYYVVAECCLVTAVRDG 447
D + E+ AYY A+CCLV AVRDG
Sbjct: 414 DRLVPRSEKTAYYAAADCCLVNAVRDG 440
|
|
| TAIR|locus:2195678 TPS10 "trehalose phosphate synthase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1398 (497.2 bits), Expect = 3.4e-279, Sum P(2) = 3.4e-279
Identities = 269/447 (60%), Positives = 330/447 (73%)
Query: 1 MVSKSYSNLLELASGEAPSFGRMRRRIPRIMTVAGIIXXXXXXXXXXXXXXXXXXXXXXX 60
M SKS+ NLL+LASG+ + R +PR+MTV GII
Sbjct: 1 MGSKSFGNLLDLASGDLLDIPQTPRYLPRVMTVPGIISDVDGYGISDGDSDVISLPCRER 60
Query: 61 XIIIVANQLPIRAQRKSDNSKGWIFSWDENSXXXXXXXXXXXXXIEVIYVGCLKEEIHVN 120
II VAN LP+ ++ S+ K W FS D +S EVIYVG LK + V+
Sbjct: 61 KII-VANFLPLNGKKDSETGK-WKFSLDNDSPLLHLKDGFSPET-EVIYVGSLKTHVDVS 117
Query: 121 EQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLW 180
EQDEVS L + F CV TFLP D+ ++Y GFCKQQLWPLFHYMLP+ PD G RF+R LW
Sbjct: 118 EQDEVSHNLFEEFNCVATFLPQDVHKKFYLGFCKQQLWPLFHYMLPMCPDHGERFDRGLW 177
Query: 181 QAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240
QAYVS NKIFAD++M VIN E+D++W+HDYHLMVLPTFLR+RF+RVKLGFFLHSPFPSSE
Sbjct: 178 QAYVSANKIFADKVMGVINLEEDYIWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSE 237
Query: 241 IYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTV 300
IY+TLP+REE+LR LLN DLIGFHTFDYARHFLSCC RMLGL YESKRG+I L+Y GRTV
Sbjct: 238 IYRTLPVREELLRGLLNCDLIGFHTFDYARHFLSCCCRMLGLEYESKRGHIALDYLGRTV 297
Query: 301 SIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLA 360
+KILP+GIHMG+L+SVL+LP T K+ E+ +++ +GK ++LGVDDMDIFKG+SLK+LA
Sbjct: 298 FLKILPIGIHMGRLESVLNLPATAEKLKEIQEKY--RGKKIILGVDDMDIFKGLSLKILA 355
Query: 361 MEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLI 420
E LL Q+P GK+VL+QI NPARG GKDV+E + ETY TV+RIN+ +G Y+PVVLI
Sbjct: 356 FEHLLQQYPSMLGKIVLIQIVNPARGSGKDVQEARKETYDTVKRINERYGSHDYEPVVLI 415
Query: 421 DEPLKFYERIAYYVVAECCLVTAVRDG 447
D P+ +E+ AYY +AECC+V AVRDG
Sbjct: 416 DRPVPRFEKSAYYALAECCIVNAVRDG 442
|
|
| TAIR|locus:2054027 TPS11 "trehalose phosphatase/synthase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1267 (451.1 bits), Expect = 1.5e-256, Sum P(2) = 1.5e-256
Identities = 232/386 (60%), Positives = 299/386 (77%)
Query: 63 IIVANQLPIRAQRKSDNSKGWIFSWDENSXXXXXXXXXXXXXIEVIYVGCLKEEIHVNEQ 122
I+V+NQLP+RA R ++K W F +D +S EV+YVG L ++ +EQ
Sbjct: 53 IVVSNQLPLRAHRDISSNK-WCFEFDNDSLYLQLKDGFPPET-EVVYVGSLNADVLPSEQ 110
Query: 123 DEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQA 182
++VSQ LL+ F+CVPTFLP DL ++YYHGFCK LWP+FHY+LP++ G F+RS W+A
Sbjct: 111 EDVSQFLLEKFQCVPTFLPSDLLNKYYHGFCKHYLWPIFHYLLPMTQAQGSLFDRSNWRA 170
Query: 183 YVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIY 242
Y +VNKIFAD+I EV+NP+DD+VW+HDYHLM+LPTFLR RF+R+KLG FLHSPFPSSEIY
Sbjct: 171 YTTVNKIFADKIFEVLNPDDDYVWIHDYHLMILPTFLRNRFHRIKLGIFLHSPFPSSEIY 230
Query: 243 KTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSI 302
+TLP+R+EIL+ LN DL+GFHTFDYARHFLSCCSRMLGL YESKRGYIGLEY+GRTVSI
Sbjct: 231 RTLPVRDEILKGFLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTVSI 290
Query: 303 KILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAME 362
KILPVGIHMGQ++S+ + T KV L ++F +G +++LGVDD+D+FKGISLK AM
Sbjct: 291 KILPVGIHMGQIESIKASEKTAEKVKRLRERF--KGNIVMLGVDDLDMFKGISLKFWAMG 348
Query: 363 QLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPG-YDPVVLID 421
QLL Q+ E +GKVVLVQI NPAR GKDV++V+ + + IN FG+PG Y P+V I+
Sbjct: 349 QLLEQNEELRGKVVLVQITNPARSSGKDVQDVEKQINLIADEINSKFGRPGGYKPIVFIN 408
Query: 422 EPLKFYERIAYYVVAECCLVTAVRDG 447
P+ +++AYY ++EC +V AVRDG
Sbjct: 409 GPVSTLDKVAYYAISECVVVNAVRDG 434
|
|
| DICTYBASE|DDB_G0287657 tpsA "alpha,alpha-trehalose-phosphate synthase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 1120 (399.3 bits), Expect = 1.6e-117, Sum P(2) = 1.6e-117
Identities = 231/665 (34%), Positives = 384/665 (57%)
Query: 62 IIIVANQLPIRAQRKSDNSKGWIFSWDENSXXXXXXXXXXXXXIEVIYVGCLKEEIHVNE 121
+I+V+N+LP+ +++S N K W I+VG + EI ++
Sbjct: 18 LIVVSNRLPVSIKKES-NGK-----WSCKMSSGGLVAALSGLKSNFIWVGWIGAEIEEDD 71
Query: 122 QDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQ 181
+ E+ ++L + C+P FL + + +Y+GF LWPLFHY LP D R +W
Sbjct: 72 RKEIKELLWKDYSCIPVFLSEKVANEHYNGFSNGVLWPLFHY-LPGDLDYDDR----IWN 126
Query: 182 AYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEI 241
+YV N+ F+ + E++ P +D VWVHDYH+M+LP L+++ ++GFFLH PFPSSEI
Sbjct: 127 SYVEANEQFSSVVAEILKP-NDLVWVHDYHMMLLPEILKQKKPDARIGFFLHIPFPSSEI 185
Query: 242 YKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVS 301
++ LP R+EIL +LN LIGFHT+DYARHFL C+R++GL E+ G+ + R V
Sbjct: 186 FRVLPCRKEILLGILNCCLIGFHTYDYARHFLKSCTRIVGL--ETAPN--GVYFKDRFVQ 241
Query: 302 IKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAM 361
+ + PVGI + L + ++ EL + F +G +L+G+D +D KGI KL A+
Sbjct: 242 VGVFPVGIDPDKFFESLKTTQVQNRIKELKESF--EGTKVLIGIDRLDYIKGIPQKLQAI 299
Query: 362 EQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLID 421
E+L ++PEW+GK+VL+Q+A P+R ++ ++++ E V RIN +G GY P+ +
Sbjct: 300 ERLFQKYPEWKGKLVLIQVAVPSRQDVEEYQKLKKEVEELVGRINGLYGSIGYSPIHYLF 359
Query: 422 EPLKFYERIAYYVVAECCLVTAVRDGSEP--------SSPKKSMLVVSEFIGCSPSLSGA 473
+ + E A Y +++ L+T++RDG + +L++SEF G + SLSGA
Sbjct: 360 QSVDPSELTALYNISDAALITSIRDGMNLVAQEYIVCQTENNGVLILSEFTGAAQSLSGA 419
Query: 474 IRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCREH 533
+ +NPWN + V+D++ ++L M +E++ +H+ +YV+ H +W F+++L +
Sbjct: 420 VMINPWNTEEVADSIHNSLLMPPEEREEKHQMLLKYVTKHTASHWGLGFVKELNKASSN- 478
Query: 534 VRQRCWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDK- 592
+ ++V + +KL +E +V YK++ R ++ YDGTL+P ++ +
Sbjct: 479 ------------TDKMVTI----QKLDIEKVVDIYKQSKRRLLIFAYDGTLIPYNNVPQL 522
Query: 593 -SPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEE 651
P+ + ++ + L D V+++S + +KTL+EWF + +G++AE+G FF+L E
Sbjct: 523 SRPSQELLNSFDILSNDPKTDVYILSGRDKKTLSEWFLGIQ-IGLSAEYGCFFKLPESTE 581
Query: 652 WETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLD 711
WE +P D WK+ P+ K +T T GS E+KE W Y +ADP FGS QA+EL
Sbjct: 582 WEQQVPSMDLSWKETIRPLFKYFTLRTPGSFFEEKEMLFTWHYRNADPIFGSIQARELHL 641
Query: 712 HLESV 716
HL+++
Sbjct: 642 HLDNL 646
|
|
| TAIR|locus:2202990 TPS1 "trehalose-6-phosphate synthase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1069 (381.4 bits), Expect = 6.2e-112, Sum P(2) = 6.2e-112
Identities = 272/785 (34%), Positives = 418/785 (53%)
Query: 62 IIIVANQLPIRAQRKSDNSKGWIFSWDENSXXXXXXXXXXXXXIEVIYVGCLKEEIHVNE 121
+++VAN+LP+ A R+ ++S W E S E ++G VN
Sbjct: 94 LLVVANRLPVSAVRRGEDS--WSL---EISAGGLVSALLGVKEFEARWIGWAG----VNV 144
Query: 122 QDEVSQILLDTF----KCVPTFLPPDLFSRYYHGFCKQQLWPLFHYM-LPLSPDLGG-RF 175
DEV Q L +C+P FL ++ +YY+G+C LWPLFHY+ LP L R
Sbjct: 145 PDEVGQKALSKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRS 204
Query: 176 NRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSP 235
+S + AY N++FAD + E E D VW HDYHLM LP L++ +++K+G+FLH+P
Sbjct: 205 FQSQFAAYKKANQMFADVVNEHYE-EGDVVWCHDYHLMFLPKCLKEYNSKMKVGWFLHTP 263
Query: 236 FPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEY 295
FPSSEI++TLP R E+LR++L +DL+GFHT+DYARHF+S C+R+LGL + G+E
Sbjct: 264 FPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE----GVED 319
Query: 296 YGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGIS 355
GR + P+GI + L +P + EL ++F G+ ++LGVD +D+ KGI
Sbjct: 320 QGRLTRVAAFPIGIDSDRFIRALEVPEVIQHMKELKERF--AGRKVMLGVDRLDMIKGIP 377
Query: 356 LKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYD 415
K+LA E+ L ++ W+ KVVL+QIA P R + +++ ++ + V RIN FG
Sbjct: 378 QKILAFEKFLEENANWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAV 437
Query: 416 PVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEPSS--------PKKSMLVVSEFIGCS 467
P+ +D L F+ A Y V + LVT++RDG S KK +L++SEF G +
Sbjct: 438 PIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQEAKKGVLILSEFAGAA 497
Query: 468 PSL-SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDL 526
SL +GAI VNPWNI V+ ++ AL M +E++ RH ++ +V TH WA +F+ +L
Sbjct: 498 QSLGAGAILVNPWNITEVAASIGQALNMTAEEREKRHRHNFHHVKTHTAQEWAETFVSEL 557
Query: 527 ERTCREHVRQRCWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRAILLDYDGTLMP 586
T E R+ + P +L + Y ++ R ++L ++ TL
Sbjct: 558 NDTVIE------------AQLRISKVPP---ELPQHDAIQRYSKSNNRLLILGFNATLTE 602
Query: 587 QASID--KSPNSKTIDI---------LNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLG 635
+ K +D+ L +LC D + + ++S SR L + F + +
Sbjct: 603 PVDNQGRRGDQIKEMDLNLHPELKGPLKALCSDPSTTIVVLSGSSRSVLDKNFGEYD-MW 661
Query: 636 IAAEHGYFFRLRRDEEWETCIPV-ADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSY 694
+AAE+G F RL E W T +P + W + V K +TE T S E ++T+L+W+Y
Sbjct: 662 LAAENGMFLRLTNGE-WMTTMPEHLNMEWVDSVKHVFKYFTERTPRSHFETRDTSLIWNY 720
Query: 695 EDADPDFGSCQAKELLDHL-ESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQE 753
+ AD +FG QA++LL HL ++N V V G VEV+ GV KG R+L +
Sbjct: 721 KYADIEFGRLQARDLLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGAAIDRILGEIVH 780
Query: 754 REML--P-DFVLCVGDDRS-DEDMFEVIISSMAG--PSIA---PRAEVFA-CTVG--RKP 801
+ + P D+VLC+G DED++ + P+IA P ++ A + G R P
Sbjct: 781 SKSMTTPIDYVLCIGHFLGKDEDVYTFFEPELPSDMPAIARSRPSSDSGAKSSSGDRRPP 840
Query: 802 SKAKY 806
SK+ +
Sbjct: 841 SKSTH 845
|
|
| DICTYBASE|DDB_G0284975 tpsB "alpha,alpha-trehalose-phosphate synthase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 1085 (387.0 bits), Expect = 7.8e-110, P = 7.8e-110
Identities = 246/737 (33%), Positives = 401/737 (54%)
Query: 108 IYVGCLKEEIHVNEQDEVSQILLDT---FKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYM 164
+++G E++ +E+ ++Q + + F+ V FL P F YY G+CK LW L HY
Sbjct: 97 LWIGWSHCEVNEDEEPMLNQAIKEFSPHFEHV--FLNPRQFENYYKGYCKNGLWLLLHYQ 154
Query: 165 LPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFN 224
+ R W+ YV VN++FA++I V P D +W+HDYHLM++P LR+
Sbjct: 155 MNFI-----RMQSEWWEEYVGVNQMFAEKIASVWRPSD-IIWIHDYHLMLVPQMLRQLLP 208
Query: 225 -RVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLT 283
+GFF H+PFPS E+++ LP R+E+L+ +L+S+LIGF +F+Y RHF S C+R+L L
Sbjct: 209 PEASIGFFFHAPFPSYELFRILPNRKELLKGILSSNLIGFQSFEYVRHFKSSCARLLDLE 268
Query: 284 YESKRGYIGLEYY--GRT--VSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGK 339
K GLE + G T +++ P+G+ L+LP ++V L K F +GK
Sbjct: 269 VHPK----GLEIFEDGSTHFTKLQVYPIGVDYNDFAKNLNLPEVSSRVESLRKIF--KGK 322
Query: 340 VMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETY 399
+++ D +D +G+ KL EQLL HPE+ GK+V +QI P G + E Q +
Sbjct: 323 KVVVARDRLDQIEGVPRKLEVFEQLLNDHPEYIGKLVFIQIYEPTVEEGDETDE-QKILH 381
Query: 400 STVE----RINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEPSSPKK 455
TV RIN FGK ++P+ I++ + + E A Y +A+ L+T +RDG +S +
Sbjct: 382 KTVNEMVGRINGKFGKLSFNPIEYINKKISYEELSALYKLADIALITPIRDGMNLTSHEY 441
Query: 456 --------SMLVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHY 507
+L++SEF G + L G+I VNP++ + +A+ AL M+ +++L+H+ +Y
Sbjct: 442 VVCQKDNFGVLILSEFAGAARCLGGSIIVNPFSKKEIMEAIIEALNMSMHDRKLKHQINY 501
Query: 508 RYVSTHDVGYWARSFLQDLERTCREHVRQRCWGIGFGLSFRVVALDPNFKKLSMEHIVSA 567
YV + +W + FL DL ++ + ++ + + + + I +
Sbjct: 502 NYVLANTSSFWGKRFLCDLNEATQKEI-----------------METSVPRANFQEIEDS 544
Query: 568 YKRTTTRAILLDYDGTLMPQASIDKS--PNSKTIDILNSLCRDKNNMVFLVSAKSRKTLA 625
YK+ R LDYDGTL P + P+ + ID+L+ L D+ N V+++S + R +L
Sbjct: 545 YKKAKVRVFFLDYDGTLTPLVRLPSQAMPSKQLIDVLSKLTEDRRNEVYVISGRDRSSLE 604
Query: 626 EWFSPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIED 685
+W +G++ EHG F R + + T P A+ WK +M+ + + T GS E
Sbjct: 605 KWLGHLP-IGMSCEHGVFTRQPGENQPWTESPNAEVQWKDTVLSIMQDFEDRTPGSMTET 663
Query: 686 KETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAK 745
K+ + W Y +ADPDFG QAKEL+ L SV P+ + SG+ +EVKP G+NKG + K
Sbjct: 664 KQVNITWHYRNADPDFGQFQAKELIAQLRSVANKYPLDILSGKKAIEVKPIGINKGEIVK 723
Query: 746 RLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAK 805
+L + DF+LC+GDD++DEDMF+ + + PS R C + +KA+
Sbjct: 724 MILQKIDA-----DFILCIGDDKTDEDMFKALYNV---PSFTIRV----CGDLEESTKAR 771
Query: 806 YYLDDTVEIVRLMQGLA 822
++ + E++ L+ L+
Sbjct: 772 GVVESSSEVLTLLNRLS 788
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q54K57 | TPSA_DICDI | 2, ., 4, ., 1, ., 1, 5 | 0.3337 | 0.8459 | 0.9590 | yes | no |
| Q94AH8 | TPS6_ARATH | 2, ., 4, ., 1, ., 1, 5 | 0.8050 | 0.9915 | 0.9581 | yes | no |
| O23617 | TPS5_ARATH | 2, ., 4, ., 1, ., 1, 5 | 0.7243 | 0.9831 | 0.9477 | no | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| grail3.0010065002 | trehalose-phosphatase/synthase 6 (EC-2.4.1.15) (852 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| gw1.XIII.2712.1 | cinnamyl-alcohol dehydrogenase (EC-1.1.1.219) (322 aa) | • | 0.510 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 831 | |||
| PLN02205 | 854 | PLN02205, PLN02205, alpha,alpha-trehalose-phosphat | 0.0 | |
| pfam00982 | 470 | pfam00982, Glyco_transf_20, Glycosyltransferase fa | 0.0 | |
| PRK14501 | 726 | PRK14501, PRK14501, putative bifunctional trehalos | 0.0 | |
| cd03788 | 460 | cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase ( | 0.0 | |
| PLN03063 | 797 | PLN03063, PLN03063, alpha,alpha-trehalose-phosphat | 1e-168 | |
| PLN03064 | 934 | PLN03064, PLN03064, alpha,alpha-trehalose-phosphat | 1e-165 | |
| COG0380 | 486 | COG0380, OtsA, Trehalose-6-phosphate synthase [Car | 1e-144 | |
| TIGR02400 | 456 | TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-p | 1e-135 | |
| pfam02358 | 235 | pfam02358, Trehalose_PPase, Trehalose-phosphatase | 2e-82 | |
| TIGR02398 | 487 | TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosph | 9e-63 | |
| PRK10117 | 474 | PRK10117, PRK10117, trehalose-6-phosphate synthase | 5e-61 | |
| COG1877 | 266 | COG1877, OtsB, Trehalose-6-phosphatase [Carbohydra | 4e-41 | |
| TIGR00685 | 244 | TIGR00685, T6PP, trehalose-phosphatase | 8e-22 | |
| TIGR01484 | 204 | TIGR01484, HAD-SF-IIB, HAD-superfamily hydrolase, | 1e-18 | |
| PRK10187 | 266 | PRK10187, PRK10187, trehalose-6-phosphate phosphat | 8e-07 | |
| PLN03017 | 366 | PLN03017, PLN03017, trehalose-phosphatase | 3e-05 | |
| COG0561 | 264 | COG0561, Cof, Predicted hydrolases of the HAD supe | 1e-04 | |
| PLN02580 | 384 | PLN02580, PLN02580, trehalose-phosphatase | 1e-04 | |
| PLN02151 | 354 | PLN02151, PLN02151, trehalose-phosphatase | 1e-04 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 5e-04 |
| >gnl|CDD|177855 PLN02205, PLN02205, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 1692 bits (4383), Expect = 0.0
Identities = 762/854 (89%), Positives = 809/854 (94%), Gaps = 23/854 (2%)
Query: 1 MVSKSYSNLLELASGEAPSFGRMRRRIPRIMTVAGIISDLDDDPADSVCSDPSSSSVQRD 60
MVS+SYSNLLELASGE+PSFGRM RRIPRIMTVAGI+SD+DDDP++SVCSDPSSSSV +D
Sbjct: 1 MVSRSYSNLLELASGESPSFGRMNRRIPRIMTVAGIMSDIDDDPSESVCSDPSSSSVPKD 60
Query: 61 RIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVN 120
RIIIVANQLPIRAQRKSD SKGWIFSWDENSLLLQLKDGLGDD+IEVIYVGCLKEEIH+N
Sbjct: 61 RIIIVANQLPIRAQRKSDGSKGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLN 120
Query: 121 EQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLW 180
EQ+EVSQILL+TFKCVPTFLPPDLF+RYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLW
Sbjct: 121 EQEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLW 180
Query: 181 QAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240
QAYVSVNKIFADRIMEVINPEDDFVW+HDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE
Sbjct: 181 QAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240
Query: 241 IYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTV 300
IYKTLPIREE+LRALLNSDLIGFHTFDYARHFLSCCSRMLGL+YESKRGYIGLEYYGRTV
Sbjct: 241 IYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTV 300
Query: 301 SIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLA 360
SIKILPVGIHMGQLQSVLSLP TEAKV ELIKQF DQ ++MLLGVDDMDIFKGISLKLLA
Sbjct: 301 SIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLA 360
Query: 361 MEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLI 420
MEQLL+QHPEWQGKVVLVQIANPARG+GKDVKEVQAET+STV+RIN+TFGKPGYDP+VLI
Sbjct: 361 MEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLI 420
Query: 421 DEPLKFYERIAYYVVAECCLVTAVRDG-----------------------SEPSSPKKSM 457
D PLKFYER+AYYVVAECCLVTAVRDG EPS+PKKSM
Sbjct: 421 DAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSM 480
Query: 458 LVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGY 517
LVVSEFIGCSPSLSGAIRVNPWNIDAV+DAMDSALEMA+ EKQLRHEKHYRYVSTHDVGY
Sbjct: 481 LVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGY 540
Query: 518 WARSFLQDLERTCREHVRQRCWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRAIL 577
WARSFLQDLERTCR+H R+RCWGIGFGLSFRVVALDPNF+KLSMEHIVSAYKRTTTRAIL
Sbjct: 541 WARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAIL 600
Query: 578 LDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIA 637
LDYDGTLMPQASIDKSP+SK+IDILN+LCRDKNNMVF+VSA+SRKTLA+WFSPCE LGIA
Sbjct: 601 LDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIA 660
Query: 638 AEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDA 697
AEHGYF RL+RD EWETC+PVADC WKQIAEPVM+LYTETTDGSTIEDKETALVW YEDA
Sbjct: 661 AEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDA 720
Query: 698 DPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREML 757
DPDFGSCQAKELLDHLESVLANEPVTVKSGQN+VEVKPQGV+KGLVAKRLLS MQER ML
Sbjct: 721 DPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSIMQERGML 780
Query: 758 PDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDTVEIVRL 817
PDFVLC+GDDRSDEDMFEVI SSMAGPSIAPRAEVFACTVG+KPSKAKYYLDDT EIVRL
Sbjct: 781 PDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQKPSKAKYYLDDTAEIVRL 840
Query: 818 MQGLACVADQMVPV 831
MQGLA V++Q++P
Sbjct: 841 MQGLASVSEQILPE 854
|
Length = 854 |
| >gnl|CDD|216227 pfam00982, Glyco_transf_20, Glycosyltransferase family 20 | Back alignment and domain information |
|---|
Score = 640 bits (1653), Expect = 0.0
Identities = 233/479 (48%), Positives = 319/479 (66%), Gaps = 21/479 (4%)
Query: 61 RIIIVANQLPIRAQRKSDNSKGWIFSWDENSL-LLQLKDGLGDDDIEVIYVGCLKEEIHV 119
R+++V+N+LP+ A+R+ + W FS +S L+ +GL + E ++VG +
Sbjct: 2 RLVVVSNRLPVTAKREEEGK--WEFSIKMSSGGLVSALNGL-SEATEGVWVGWPGVPVDE 58
Query: 120 NE-QDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRS 178
+E +D VSQ+L + F CVP FL + YY+GF LWPLFHY LP P+ F+RS
Sbjct: 59 DEPKDRVSQLLKEKFTCVPVFLDDEDVDEYYNGFSNSILWPLFHYRLP--PNNEDEFDRS 116
Query: 179 LWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPS 238
W AYV VNK+FAD+I+EV D +WVHDYHLM+LP LRKR K+GFFLH PFPS
Sbjct: 117 WWDAYVKVNKLFADKIVEVYKD-GDLIWVHDYHLMLLPQMLRKRLPDAKIGFFLHIPFPS 175
Query: 239 SEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGR 298
SEI++ LP+REEILR LL +DLIGFHT+DYARHFLSCCSR+LGL S G+EY GR
Sbjct: 176 SEIFRCLPVREEILRGLLGADLIGFHTYDYARHFLSCCSRLLGLETTSDG---GVEYGGR 232
Query: 299 TVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKL 358
TVS+ P+GI G+++S L P + KV EL ++F ++ K++ LGVD +D KGI KL
Sbjct: 233 TVSVGAFPIGIDPGRIESGLKSPSVQEKVKELKERFGNKKKLI-LGVDRLDYIKGIPQKL 291
Query: 359 LAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVV 418
LA E+ L ++PEW+GKVVLVQIA P+RG ++ + ++++ V RIN FG Y PV
Sbjct: 292 LAFERFLEEYPEWRGKVVLVQIAVPSRGDVEEYQNLRSQVEELVGRINGEFGTLDYTPVH 351
Query: 419 LIDEPLKFYERIAYYVVAECCLVTAVRDGSE--------PSSPKKSMLVVSEFIGCSPSL 470
+ L F E IA Y +A+ CLVT++RDG +K +L++SEF G + SL
Sbjct: 352 HLHRSLDFDELIALYAIADVCLVTSLRDGMNLVAYEYVACQQDRKGVLILSEFAGAAQSL 411
Query: 471 -SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLER 528
GAI VNPW+I+ V++A++ AL M+++E+Q RH K ++Y+S HDV YWA SFL DL+R
Sbjct: 412 NDGAILVNPWDIEEVAEAINEALTMSEEERQKRHRKLFKYISKHDVQYWAESFLSDLKR 470
|
Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. Length = 470 |
| >gnl|CDD|184712 PRK14501, PRK14501, putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Score = 583 bits (1506), Expect = 0.0
Identities = 279/782 (35%), Positives = 400/782 (51%), Gaps = 79/782 (10%)
Query: 61 RIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVG----CLKEE 116
R+IIV+N+LP+ R+ G + L L+ ++VG L+EE
Sbjct: 2 RLIIVSNRLPVTVVREDG---GVELTPSVGGLATGLRSFHERG--GGLWVGWPGLDLEEE 56
Query: 117 IHVNEQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFN 176
EQ + L+ VP FL + RYY GFC LWPLFHY + F
Sbjct: 57 --SEEQRARIEPRLEELGLVPVFLSAEEVDRYYEGFCNSTLWPLFHYFPEYTE-----FE 109
Query: 177 RSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPF 236
W++Y VN+ FA+ I + P D VWVHDY LM+LP LR+R ++GFFLH PF
Sbjct: 110 DRFWESYERVNQRFAEAIAAIARP-GDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPF 168
Query: 237 PSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYY 296
PS E+++ LP REEIL LL +DLIGFHT+DY RHFLS R+LG YE++ G I L
Sbjct: 169 PSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLG--YETELGEIRLG-- 224
Query: 297 GRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISL 356
GR V + P+GI + + P + ++ L + + K+ +L +D +D KGI
Sbjct: 225 GRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGR-KI-ILSIDRLDYTKGIPR 282
Query: 357 KLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDP 416
+LLA E+ L ++PEW+GKV LVQ+A P+R +E++ E V RIN FG + P
Sbjct: 283 RLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTP 342
Query: 417 VVLIDEPLKFYERIAYYVVAECCLVTAVRDG----------SEPSSPKKSMLVVSEFIGC 466
+ L F E +A Y A+ LVT +RDG S +L++SE G
Sbjct: 343 IHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTD--GDGVLILSEMAGA 400
Query: 467 SPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDL 526
+ L+ A+ VNP +I+ ++ A+ ALEM ++E++ R + + +DV WA FL +L
Sbjct: 401 AAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDEL 460
Query: 527 ERTCREHVRQRCWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRAILLDYDGTLMP 586
++ F + P + E I++ Y+ + R +LLDYDGTL+P
Sbjct: 461 REAAEKNKA-----------FASKPITPA----AAEEIIARYRAASRRLLLLDYDGTLVP 505
Query: 587 ------QASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEH 640
A DK + D+L L D N V ++S + R TL WF + + AEH
Sbjct: 506 FAPDPELAVPDK----ELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDL-PIHLVAEH 560
Query: 641 GYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPD 700
G + R EW+ PVA WK P+++ + + T GS IE+KE +L W Y +ADP+
Sbjct: 561 GAWSRA-PGGEWQLLEPVAT-EWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPE 618
Query: 701 FGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDF 760
G +A EL+ L S+L+N P+ V G +VEV+P GVNKG +RLL DF
Sbjct: 619 LGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGP-----YDF 673
Query: 761 VLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDTVEIVRLMQG 820
VL +GDD +DEDMF A VG S+A+Y L E+ L++
Sbjct: 674 VLAIGDDTTDEDMFR-----------ALPETAITVKVGPGESRARYRLPSQREVRELLRR 722
Query: 821 LA 822
L
Sbjct: 723 LL 724
|
Length = 726 |
| >gnl|CDD|99963 cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Score = 571 bits (1474), Expect = 0.0
Identities = 207/477 (43%), Positives = 279/477 (58%), Gaps = 27/477 (5%)
Query: 61 RIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVN 120
R+++V+N+LP+ +R D G + L GL ++VG E
Sbjct: 1 RLVVVSNRLPVSIERDGD---GEFEARRSAGGLATALKGLLKR-TGGLWVGWSGIEEDEE 56
Query: 121 EQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLW 180
E+DEVS LL + P FL P+ F YY+GF + LWPLFHY L L RF+R W
Sbjct: 57 EEDEVSTELLGEYTVAPVFLSPEEFEGYYNGFSNEVLWPLFHYRLDL-----ARFDREDW 111
Query: 181 QAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240
+AYV VN+ FAD I EV+ P D VWVHDYHL++LP LR+R ++GFFLH PFPSSE
Sbjct: 112 EAYVRVNRKFADAIAEVLRP-GDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPSSE 170
Query: 241 IYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTV 300
I++ LP REE+LR LL +DLIGF T YAR+FLSCCSR+LGL G+EY GR V
Sbjct: 171 IFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTD---DGGVEYGGRRV 227
Query: 301 SIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLA 360
+ P+GI + + + P + + +EL ++ G+ +++GVD +D KGI +LLA
Sbjct: 228 RVGAFPIGIDPDAFRKLAASPEVQERAAELRERL--GGRKLIVGVDRLDYSKGIPERLLA 285
Query: 361 MEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLI 420
E+LL ++PEW+GKVVLVQIA P+R + +E++ E V RIN FG + PV +
Sbjct: 286 FERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYL 345
Query: 421 DEPLKFYERIAYYVVAECCLVTAVRDG----------SEPSSPKKSMLVVSEFIGCSPSL 470
L E A Y A+ LVT +RDG +L++SEF G + L
Sbjct: 346 YRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVAC--QDDDPGVLILSEFAGAAEEL 403
Query: 471 SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLE 527
SGA+ VNP++ID V+DA+ AL M +E++ RH K YV THDV WA SFL DL
Sbjct: 404 SGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDLA 460
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. Length = 460 |
| >gnl|CDD|215555 PLN03063, PLN03063, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 505 bits (1303), Expect = e-168
Identities = 282/816 (34%), Positives = 430/816 (52%), Gaps = 79/816 (9%)
Query: 58 QRDRIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEI 117
+R R+++VAN+LP+ A+R ++S W L+ L LG + E ++G ++
Sbjct: 9 ERPRLLVVANRLPVSAKRTGEDS--WSLEMSPGGLVSAL---LGVKEFETKWIGWPGVDV 63
Query: 118 HVNEQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYM-LPLSPDLGGRFN 176
H L C+P FL ++F +YY+G+C LWP+FHYM LP
Sbjct: 64 HDEIGKAALTESLAEKGCIPVFLN-EVFDQYYNGYCNNILWPIFHYMGLPQEDRHDA--T 120
Query: 177 RSL---WQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLH 233
R+ + AY N++F D + E E D VW HDYHLM LP +L++ N++K+G+FLH
Sbjct: 121 RTFESQYDAYKKANRMFLDVVKENYE-EGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLH 179
Query: 234 SPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGL--TYESKRGYI 291
+PFPSSEIYKTLP R E+LRA+L +DLIGFHT+D+ARHFLS C+R+LG+ T+E
Sbjct: 180 TPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHE------ 233
Query: 292 GLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIF 351
G+ G+ + + P+GI + + LP + + EL + F G+ ++LGVD +D+
Sbjct: 234 GVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFF--AGRKVILGVDRLDMI 291
Query: 352 KGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGK 411
KGI K LA E+ L ++PEW+ KV+LVQIA P R + ++++++ + V RIN FG
Sbjct: 292 KGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGS 351
Query: 412 PGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEPSS--------PKKSMLVVSEF 463
P+ +D + F A Y + + LVT++RDG S KK +LV+SEF
Sbjct: 352 VSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEF 411
Query: 464 IGCSPSL-SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSF 522
G SL +GA+ VNPWNI VS A+ AL M+D+E++ RH +++YV TH WA F
Sbjct: 412 AGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDF 471
Query: 523 LQDLERTCREHVRQRCWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRAILLDYDG 582
+ +L E R + L + ++ Y ++ R ++L + G
Sbjct: 472 MSELNDIIVEA------------ELRTRNIPLE---LPEQDVIQQYSKSNNRLLILGFYG 516
Query: 583 TLM-PQASIDKSP----NSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIA 637
TL P+ S K + + + L +LC D V ++S + L + F N+ +A
Sbjct: 517 TLTEPRNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGE-YNIWLA 575
Query: 638 AEHGYFFRLRRDEEWETCIPV-ADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYED 696
AE+G F R EW T +P + W + V K +T+ T S +E ET+LVW+YE
Sbjct: 576 AENGMFLR-HTSGEWVTTMPEHMNLDWVDGVKNVFKYFTDRTPRSYVEKSETSLVWNYEY 634
Query: 697 ADPDFGSCQAKELLDHL-ESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQERE 755
AD +FG QA+++L HL ++N V V GQ VEV GV KG R+L + +
Sbjct: 635 ADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAIGRILGEIVHNK 694
Query: 756 MLP---DFVLCVGDDRS-DEDMF-----EVIISSMAGPSIAPRAE--------------V 792
+ DFV C G DED++ E++ + S ++
Sbjct: 695 SMTTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENY 754
Query: 793 FACTVGRKPSKAKYYLDDTVEIVRLMQGLACVADQM 828
F+C +G+ +KA+Y LD + ++V L+ LA M
Sbjct: 755 FSCAIGQARTKARYVLDSSNDVVSLLHKLAVANTTM 790
|
Length = 797 |
| >gnl|CDD|215556 PLN03064, PLN03064, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 503 bits (1298), Expect = e-165
Identities = 282/808 (34%), Positives = 419/808 (51%), Gaps = 84/808 (10%)
Query: 7 SNLLELASGEAPSFGRMRRRIPRIMTVAGIISDLDDDPADSVCSDPSSSSVQRDRIIIVA 66
S E + + +++ A S L D C R R+++VA
Sbjct: 46 SEAFENDLRLSEGDNDSSSHVEQLLEGAAAESALPDG-----CERQEGRRPLRQRLLVVA 100
Query: 67 NQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVNEQDEVS 126
N+LP+ A R+ ++S W L+ L LG + E ++G VN DEV
Sbjct: 101 NRLPVSAVRRGEDS--WSLEISAGGLVSAL---LGVKEFEARWIGWAG----VNVPDEVG 151
Query: 127 Q----ILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYM-LPLSPDLGG-RFNRSLW 180
Q L +C+P FL ++ +YY+G+C LWPLFHY+ LP L R +S +
Sbjct: 152 QKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQF 211
Query: 181 QAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240
AY N++FAD + E E D VW HDYHLM LP L++ + +K+G+FLH+PFPSSE
Sbjct: 212 AAYKKANQMFADVVNEHYE-EGDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSE 270
Query: 241 IYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGL--TYESKRGYIGLEYYGR 298
I++TLP R E+LR++L +DL+GFHT+DYARHF+S C+R+LGL T E G+E GR
Sbjct: 271 IHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE------GVEDQGR 324
Query: 299 TVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKL 358
+ P+GI + L P + + EL ++F G+ ++LGVD +D+ KGI K+
Sbjct: 325 LTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERF--AGRKVMLGVDRLDMIKGIPQKI 382
Query: 359 LAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQ---AETYSTVERINQTFGKPGYD 415
LA E+ L ++PEW+ KVVL+QIA P R DV E Q ++ + V RIN FG
Sbjct: 383 LAFEKFLEENPEWRDKVVLLQIAVPTR---TDVPEYQKLTSQVHEIVGRINGRFGTLTAV 439
Query: 416 PVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEPSS--------PKKSMLVVSEFIGCS 467
P+ +D L F+ A Y V + LVT++RDG S KK +L++SEF G +
Sbjct: 440 PIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAA 499
Query: 468 PSL-SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDL 526
SL +GAI VNPWNI V+ ++ AL M ++E++ RH ++ +V+TH WA +F+ +L
Sbjct: 500 QSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVSEL 559
Query: 527 ERTCREHVRQRCWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRAILLDYDGTLMP 586
T E R + P +L E + Y ++ R ++L ++ TL
Sbjct: 560 NDTVVE------------AQLRTRQVPP---QLPPEDAIQRYLQSNNRLLILGFNATLTE 604
Query: 587 QASIDKS-------------PNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCEN 633
P K + L +LC D + ++S R L E F +
Sbjct: 605 PVDTPGRRGDQIKEMELRLHPELK--EPLRALCSDPKTTIVVLSGSDRSVLDENFGEF-D 661
Query: 634 LGIAAEHGYFFRLRRDEEWETCIP-VADCGWKQIAEPVMKLYTETTDGSTIEDKETALVW 692
+ +AAE+G F R + EW T +P + W + V + +TE T S E +ET+LVW
Sbjct: 662 MWLAAENGMFLRHTKG-EWMTTMPEHLNMDWVDSVKHVFEYFTERTPRSHFETRETSLVW 720
Query: 693 SYEDADPDFGSCQAKELLDHL-ESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTM 751
+Y+ AD +FG QA+++L HL ++N V V G VEV+P GV KG R+L +
Sbjct: 721 NYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKGAAIDRILGEI 780
Query: 752 --QEREMLP-DFVLCVGDDRS-DEDMFE 775
+ P D+VLC+G DED++
Sbjct: 781 VHSKSMTTPIDYVLCIGHFLGKDEDIYT 808
|
Length = 934 |
| >gnl|CDD|223457 COG0380, OtsA, Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 434 bits (1117), Expect = e-144
Identities = 187/492 (38%), Positives = 273/492 (55%), Gaps = 28/492 (5%)
Query: 47 SVCSDPSSSSVQRDRIIIVANQLPIRAQRKSDNSKGWIFSWDEN--SLLLQLKDGLGDDD 104
+ + P S R+I+V+N+LP++ + D I + L+ LK L
Sbjct: 6 PITASPLEDS----RLIVVSNRLPVKKTPEGDKG---IEFGKRSAGGLVTALKPLL--RV 56
Query: 105 IEVIYVGCLKEEIHVNEQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYM 164
++G +E + + + F P L + + YY+GF LWPLFHY
Sbjct: 57 DGGTWIGWSGTTGPTDESSDDLKERIGEFTSAPVILSDEDYEGYYNGFSNAILWPLFHYF 116
Query: 165 LPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFN 224
+ + R+ W AYV VN+ FAD+I+E+ P D +WVHDYHL+++P LR+R
Sbjct: 117 IDD-----VAYERNWWDAYVKVNRKFADKIVEIYEP-GDIIWVHDYHLLLVPQMLRERIP 170
Query: 225 RVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTY 284
K+GFFLH PFPSSE+++ LP REEIL LL +DLIGF T YAR+FL CSR+LG+T
Sbjct: 171 DAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTG 230
Query: 285 ESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLG 344
++ + G GR V + P+GI + + L P + KV EL + + K +++G
Sbjct: 231 DADIRFNG--ADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAEL-GRNKKLIVG 287
Query: 345 VDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVER 404
VD +D KGI +LLA E+LL ++PEW+GKVVL+QIA P+R ++ + ++ + V R
Sbjct: 288 VDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGR 347
Query: 405 INQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSE--------PSSPKKS 456
IN FG + PV + L E +A Y A+ LVT +RDG K
Sbjct: 348 INGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKPG 407
Query: 457 MLVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVG 516
+L++SEF G + L A+ VNPW+ V+DA+ AL M+ +E++ RHEK + V THDV
Sbjct: 408 VLILSEFAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVA 467
Query: 517 YWARSFLQDLER 528
WA SFL DL +
Sbjct: 468 RWANSFLDDLAQ 479
|
Length = 486 |
| >gnl|CDD|233848 TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 410 bits (1056), Expect = e-135
Identities = 178/477 (37%), Positives = 262/477 (54%), Gaps = 30/477 (6%)
Query: 61 RIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEI-HV 119
R+I+V+N+LP+ R G S L + L L ++ G + +
Sbjct: 1 RLIVVSNRLPVPITRG-----GLEPS--AGGLAVALLGALKA--TGGVWFGWSGKTVEED 51
Query: 120 NEQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSL 179
+ + L P FL + YY+GF LWPLFHY L R++R
Sbjct: 52 EGEPFLRTELEGKITLAPVFLSEEDVDGYYNGFSNSTLWPLFHYRPDLI-----RYDRKA 106
Query: 180 WQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSS 239
W+AY VN++FA+ + ++ P D VWVHDYHLM+LP LR+ + K+GFFLH PFPSS
Sbjct: 107 WEAYRRVNRLFAEALAPLLQP-GDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPSS 165
Query: 240 EIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRT 299
EIY+TLP R E+L LL DL+GF T+D AR+FLS SR LGL G+E GRT
Sbjct: 166 EIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPN----GVESGGRT 221
Query: 300 VSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLL 359
V + P+GI + + P + +++EL + +G+ +++GVD +D KG+ +LL
Sbjct: 222 VRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESL--KGRKLIIGVDRLDYSKGLPERLL 279
Query: 360 AMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVL 419
A E+ L +HPEW+GKVVLVQIA P+RG + ++++ + V RIN FG + P+
Sbjct: 280 AFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRY 339
Query: 420 IDEPLKFYERIAYYVVAECCLVTAVRDGSEPSS--------PKKSMLVVSEFIGCSPSLS 471
++ E +A Y A+ LVT +RDG + PK +L++SEF G + L+
Sbjct: 340 LNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN 399
Query: 472 GAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLER 528
GA+ VNP++ID ++DA+ AL M +E++ RH + +DV W FL DL
Sbjct: 400 GALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDLNS 456
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsible for synthesis of only trace amounts of trehalose while the majority is synthesized by the TreYZ pathway; the significance of OtsA in this species is unclear (see Wolf, et al., PMID:12890033) [Cellular processes, Adaptations to atypical conditions]. Length = 456 |
| >gnl|CDD|216992 pfam02358, Trehalose_PPase, Trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 263 bits (675), Expect = 2e-82
Identities = 110/238 (46%), Positives = 141/238 (59%), Gaps = 7/238 (2%)
Query: 577 LLDYDGTLMPQAS--IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENL 634
LDYDGTL P P+ + + +LN L D N V ++S +SR + F NL
Sbjct: 1 FLDYDGTLSPIVEDPDAAVPSDRLLSLLNRLASDPPNTVAIISGRSRA-FEDLFFGVPNL 59
Query: 635 GIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSY 694
G+AAEHG F R E+W V D WK+ +++ YTE T GS IEDK++AL W Y
Sbjct: 60 GLAAEHGAFIRDPGGEDWTNLAEVEDLDWKKEVAAILEEYTERTPGSYIEDKKSALAWHY 119
Query: 695 EDADPDFGSCQAKELLDHLESVLANEP-VTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQE 753
+AD DFG QAKEL +HLESVL + P V V G+ +VEV+P GV+KG A+RLL +
Sbjct: 120 RNADDDFGVFQAKELAEHLESVLKDYPDVRVTQGKKVVEVRPVGVSKGKAAERLLEELGS 179
Query: 754 REMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDT 811
PDF LC+GDDR+DEDMF+V+ EV A +VG KPS AKY+LDD
Sbjct: 180 AGSPPDFPLCIGDDRTDEDMFDVV---NPTKMSGLSIEVGATSVGSKPSSAKYFLDDP 234
|
This family consist of trehalose-phosphatases EC:3.1.3.12 these enzyme catalyze the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. The aligned region is present in trehalose-phosphatases and comprises the entire length of the protein it is also found in the C-terminus of trehalose-6-phosphate synthase EC:2.4.1.15 adjacent to the trehalose-6-phosphate synthase domain - pfam00982. It would appear that the two equivalent genes in the E. coli otsBA operon otsA the trehalose-6-phosphate synthase and otsB trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. Length = 235 |
| >gnl|CDD|131451 TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Score = 218 bits (558), Expect = 9e-63
Identities = 120/409 (29%), Positives = 191/409 (46%), Gaps = 33/409 (8%)
Query: 140 LPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVIN 199
L + +YH K+ WP+ H P +F WQ ++ VN+ FA+
Sbjct: 77 LSKEQVDIFYHITSKEAFWPILH-TFPER----FQFREDDWQVFLKVNRAFAEAACLEAA 131
Query: 200 PEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSD 259
E VWVHDY+L ++P ++R+ +K+ FF H+PFPS++++ LP RE+I+ +LL D
Sbjct: 132 -EGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCD 190
Query: 260 LIGFHTFDYARHFLSCCSRMLGLTYESK-----------------RGYIGLEYYGRTVSI 302
IGFH Y +F+ ++ L S+ R L+ R V +
Sbjct: 191 YIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKL 250
Query: 303 KILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAME 362
PVG +++S L+ + + + G ++L + +D KGI KL A E
Sbjct: 251 GAHPVGTDPERIRSALAAASIREMMERIRSEL--AGVKLILSAERVDYTKGILEKLNAYE 308
Query: 363 QLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDE 422
+LL + PE GKV LV PA E+Q + V RIN F + G+ P+
Sbjct: 309 RLLERRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTR 368
Query: 423 PLKFYERIAYYVVAECCLVTAVRDG--------SEPSSPKKSMLVVSEFIGCSPSLSGAI 474
L + E A++ +A+ +T +RDG +LV+SEF G + L GA+
Sbjct: 369 SLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAGAAVELKGAL 428
Query: 475 RVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFL 523
NP++ + + + AL M E+Q R + + V+ +DV WA FL
Sbjct: 429 LTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQRWADEFL 477
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. Length = 487 |
| >gnl|CDD|182249 PRK10117, PRK10117, trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Score = 213 bits (545), Expect = 5e-61
Identities = 121/396 (30%), Positives = 214/396 (54%), Gaps = 31/396 (7%)
Query: 148 YYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWV 207
YY+ F LWP FHY L L +F R W+ Y+ VN + AD+++ ++ DD +W+
Sbjct: 76 YYNQFSNAVLWPAFHYRLDLV-----QFQRPAWEGYLRVNALLADKLLPLLKD-DDIIWI 129
Query: 208 HDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFD 267
HDYHL+ + LRKR ++GFFLH PFP+ EI+ LP +E+L L + DL+GF T +
Sbjct: 130 HDYHLLPFASELRKRGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTEN 189
Query: 268 YARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKV 327
FL C S + +T S + + +G+ ++ P+GI ++ + P K+
Sbjct: 190 DRLAFLDCLSNLTRVTTRSGKSHTA---WGKAFRTEVYPIGIEPDEIAKQAAGP-LPPKL 245
Query: 328 SELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGR 387
++L + + + V+ +D KG+ + LA E LL ++P+ GK+ QIA +RG
Sbjct: 246 AQLKAELKNVQNI--FSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGD 303
Query: 388 GKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYER---IAYYVVAECCLVTAV 444
+ ++++ + + RIN +G+ G+ P+ +++ ++R + + ++ LVT +
Sbjct: 304 VQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQ---HFDRKLLMKIFRYSDVGLVTPL 360
Query: 445 RDG-----------SEPSSPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALE 493
RDG +P++P +LV+S+F G + L+ A+ VNP++ D V+ A+D AL
Sbjct: 361 RDGMNLVAKEYVAAQDPANP--GVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALT 418
Query: 494 MADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLERT 529
M E+ RH + + +D+ +W F+ DL++
Sbjct: 419 MPLAERISRHAEMLDVIVKNDINHWQECFISDLKQI 454
|
Length = 474 |
| >gnl|CDD|224789 COG1877, OtsB, Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 151 bits (384), Expect = 4e-41
Identities = 71/254 (27%), Positives = 111/254 (43%), Gaps = 19/254 (7%)
Query: 559 LSMEHIVSAYKRTTTRAILLDYDGTLMPQA--SIDKSPNSKTIDILNSLCRDKNNMVFLV 616
L ++ Y R + LDYDGTL P+ + + +L L D N+V ++
Sbjct: 4 LQSNQLLEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAII 63
Query: 617 SAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTE 676
S +S L F +G+ AEHG R + W AD W + +++ Y E
Sbjct: 64 SGRSLAELERLFGV-PGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVE 122
Query: 677 TTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQ 736
T GS IE K A+ Y +A+ D G+ A L + L + V G+ +VE++P
Sbjct: 123 RTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELK---LRVTPGKMVVELRPP 179
Query: 737 GVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACT 796
GV+KG K + M E F + GDD +DED F ++ + ++
Sbjct: 180 GVSKGAAIKYI---MDELPFDGRFPIFAGDDLTDEDAFAA-VNKLDSITV---------K 226
Query: 797 VGRKPSKAKYYLDD 810
VG ++AK+ L
Sbjct: 227 VGVGSTQAKFRLAG 240
|
Length = 266 |
| >gnl|CDD|233092 TIGR00685, T6PP, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 95.3 bits (237), Expect = 8e-22
Identities = 72/261 (27%), Positives = 110/261 (42%), Gaps = 33/261 (12%)
Query: 574 RAILLDYDGTLMPQASIDKSPNS-----KTIDILNSLCRDKNNMVFLVSAKSRKTLAEWF 628
RA DYDGTL I P++ + + IL L +N ++++S +
Sbjct: 4 RAFFFDYDGTLSE---IVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGV 60
Query: 629 SPCENLGIAAEHGYFFRL----RRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIE 684
LG+A EHG + + IP WK A + + T G IE
Sbjct: 61 KL-PGLGLAGEHGCEMKDNGSCQDWVNLTEKIPS----WKVRANELREEITTR-PGVFIE 114
Query: 685 DKETALVWSYEDA-DPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLV 743
K AL W Y A P+ +AKEL E +L+ + V G+ +VE+KP+ VNKG +
Sbjct: 115 RKGVALAWHYRQAPVPELARFRAKELK---EKILSFTDLEVMDGKAVVELKPRFVNKGEI 171
Query: 744 AKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVI--ISSMAGPSIAPRAEVFACTVGRKP 801
KRL + + + +GDD +DED F V+ G P G K
Sbjct: 172 VKRL---LWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGS------GSKK 222
Query: 802 SKAKYYLDDTVEIVRLMQGLA 822
+ AK++L +++ + L
Sbjct: 223 TVAKFHLTGPQQVLEFLGLLV 243
|
Trehalose, a neutral disaccharide of two glucose residues, is an important osmolyte for dessication and/or salt tolerance in a number of prokaryotic and eukaryotic species, including E. coli, Saccharomyces cerevisiae, and Arabidopsis thaliana. Many bacteria also utilize trehalose in the synthesis of trehalolipids, specialized cell wall constituents believed to be involved in the uptake of hydrophobic substances. Trehalose dimycolate (TDM, cord factor) and related substances are important constituents of the mycobacterial waxy coat and responsible for various clinically important immunological interactions with host organism. This enzyme, trehalose-phosphatase, removes a phosphate group in the final step of trehalose biosynthesis. The trehalose-phosphatase from Saccharomyces cerevisiae is fused to the synthase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes [Cellular processes, Adaptations to atypical conditions]. Length = 244 |
| >gnl|CDD|233434 TIGR01484, HAD-SF-IIB, HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Score = 84.7 bits (210), Expect = 1e-18
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 13/206 (6%)
Query: 575 AILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENL 634
+ D DGTL+ + + SP +TI+ L L R+ V LV+ +S + E L
Sbjct: 1 LLFFDLDGTLLDPNAHELSP--ETIEALERL-REAGVKVVLVTGRSLAEIKELLKQL-PL 56
Query: 635 GIAAEHGYFFRLRRDEEWETCIPVAD--CGWKQIAEPVMKLYTETTDGSTIEDKETALVW 692
+ AE+G + + V + G K+ +K +E G+ IEDK A+
Sbjct: 57 PLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAI 116
Query: 693 SYEDADPDFGSCQAKELLDHLESVLANEPV--TVKSGQNLVEVKPQGVNKGLVAKRLLST 750
Y A+ ++ + LE + N+ + G+ +EV P GV+KG + L
Sbjct: 117 HYVGAELGQEL--DSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQAL--- 171
Query: 751 MQEREMLPDFVLCVGDDRSDEDMFEV 776
++E D +L GD +DE+MFEV
Sbjct: 172 LKELNGKRDEILAFGDSGNDEEMFEV 197
|
This subfamily falls within the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The Class II subfamilies are characterized by a domain that is located between the second and third conserved catalytic motifs of the superfamily domain. The IIB subfamily is distinguished from the IIA subfamily (TIGR01460) by homology and the predicted secondary structure of this domain by PSI-PRED. The IIB subfamily's Class II domain has the following predicted structure: Helix-Sheet-Sheet-(Helix or Sheet)-Helix-Sheet-(variable)-Helix-Sheet-Sheet. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing OMNI|TC0379 and OMNI|SA2196 whose relationship to the other groups is unclear [Unknown function, Enzymes of unknown specificity]. Length = 204 |
| >gnl|CDD|182291 PRK10187, PRK10187, trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 50.9 bits (122), Expect = 8e-07
Identities = 64/266 (24%), Positives = 104/266 (39%), Gaps = 55/266 (20%)
Query: 575 AILLDYDGTLMPQASIDKSPNSKTI--DILNSLCR--DKNN-MVFLVSAKSRKTLAEWFS 629
A D DGTL A I P+ + +IL L N+ + L+S +S L
Sbjct: 16 AWFFDLDGTL---AEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAK 72
Query: 630 PCENLGIAAEHGYFFRLRRDEEWETCI-----PVADCGWKQIAEPVMKLYTETTDGSTIE 684
P +A HG RRD +T I +A Q+ + +L G+ +E
Sbjct: 73 PYR-FPLAGVHG---AERRDINGKTHIVHLPDAIARDISVQLHTALAQL-----PGAELE 123
Query: 685 DKETALVWSYEDADPDFGSCQAKELLDHLESVLA--------NEPVTVKSGQNLVEVKPQ 736
K A Y QA + H +++LA + ++ G+ +VE+KP+
Sbjct: 124 AKGMAFALHYR---------QAPQ---HEDALLALAQRITQIWPQLALQPGKCVVEIKPR 171
Query: 737 GVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACT 796
G NKG + P F VGDD +DE F V ++ + G S+
Sbjct: 172 GTNKGEAIAAFMQEAPFAGRTPVF---VGDDLTDEAGFAV-VNRLGGISV---------K 218
Query: 797 VGRKPSKAKYYLDDTVEIVRLMQGLA 822
VG ++A + L ++ ++ +
Sbjct: 219 VGTGATQASWRLAGVPDVWSWLEMIT 244
|
Length = 266 |
| >gnl|CDD|178591 PLN03017, PLN03017, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 46.6 bits (110), Expect = 3e-05
Identities = 68/285 (23%), Positives = 117/285 (41%), Gaps = 52/285 (18%)
Query: 562 EHIVSAYKRTTTRAILLDYDGTLMP--------------QASIDKSPNSKTIDILNSLCR 607
E I+ A R + LDYDGTL P + ++ K I+ C
Sbjct: 101 EQIMEA-SRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLAKCFPTAIVTGRCI 159
Query: 608 DKNNMVFLVSAKSRKTLAE-WFSPCENLGIAAEHGYFFRLRRDEE------WETCIPVAD 660
DK + LAE +++ + I F R +R ++ +P+ D
Sbjct: 160 DK--------VYNFVKLAELYYAGSHGMDIKGPAKGFSRHKRVKQSLLYQPANDYLPMID 211
Query: 661 CGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANE 720
++Q+ E T++T G+ +E+ + + D S EL+ + SVL N
Sbjct: 212 EVYRQLLEK-----TKSTPGAKVENHKFCASVHFRCVDEKKWS----ELVLQVRSVLKNF 262
Query: 721 P-VTVKSGQNLVEVKPQ-GVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVII 778
P + + G+ + E++P +KG + LL ++ F + +GDDR+DED F++
Sbjct: 263 PTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKM-- 320
Query: 779 SSMAGPSIAPRAEVFACTVGRKP--SKAKYYLDDTVEIVRLMQGL 821
+ R E F V + P + A Y L D E++ + L
Sbjct: 321 -------LRDRGEGFGILVSKFPKDTDASYSLQDPSEVMDFLARL 358
|
Length = 366 |
| >gnl|CDD|223635 COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 1e-04
Identities = 38/232 (16%), Positives = 76/232 (32%), Gaps = 33/232 (14%)
Query: 571 TTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSP 630
+ + D DGTL+ +K+ + +T + L L R+K V L + + +
Sbjct: 1 MMIKLLAFDLDGTLLDS---NKTISPETKEALARL-REKGVKVVLATGRPLPDVLSILEE 56
Query: 631 --------CENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGST 682
N G +G ++ E + + ++ + +
Sbjct: 57 LGLDGPLITFN-GALIYNGGELLFQKPLSREDVEELLELLEDFQGIALVLYTDDGIYLTK 115
Query: 683 IEDKETALVWSYEDADPDFGS------------CQAKELLDHLESVLANEP-----VTVK 725
+ + P + E+L+ L L
Sbjct: 116 KRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSS 175
Query: 726 SGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVI 777
SG +++ P+GV+KG +RL + + + V+ GD +D +M EV
Sbjct: 176 SGPISLDITPKGVSKGYALQRLAKLLGIK---LEEVIAFGDSTNDIEMLEVA 224
|
Length = 264 |
| >gnl|CDD|215317 PLN02580, PLN02580, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 1e-04
Identities = 71/290 (24%), Positives = 120/290 (41%), Gaps = 48/290 (16%)
Query: 560 SMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRD--KNNMVFLVS 617
S E I + + + A+ LDYDGTL P +D + D + S ++ K ++S
Sbjct: 107 SFEQIAN-FAKGKKIALFLDYDGTLSP--IVDDPDRALMSDAMRSAVKNVAKYFPTAIIS 163
Query: 618 AKSRKTLAEWFSPCENLGIAAEHGYFF----RLRRDEEWETCIPVADCGWKQI------- 666
+SR + E E L A HG R + CI D K++
Sbjct: 164 GRSRDKVYELVGLTE-LYYAGSHGMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPAS 222
Query: 667 -----AEPVMKLYTETTD---GSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLA 718
+ V + E+T G+ +E+ + + Y + D A+ + D L+
Sbjct: 223 EFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWPLVAQCVHDVLK---- 278
Query: 719 NEP-VTVKSGQNLVEVKPQ-GVNKGLVAKRLLSTM---QEREMLPDFVLCVGDDRSDEDM 773
P + + G+ ++EV+P NKG + LL ++ ++LP ++ GDDR+DED
Sbjct: 279 KYPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYI---GDDRTDEDA 335
Query: 774 FEVIISSMAGPSIAPRAEVFACTVGRKP--SKAKYYLDDTVEIVRLMQGL 821
F+V+ G + V P S A Y L D E++ ++ L
Sbjct: 336 FKVLREGNRG---------YGILVSSVPKESNAFYSLRDPSEVMEFLKSL 376
|
Length = 384 |
| >gnl|CDD|177812 PLN02151, PLN02151, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 44.7 bits (105), Expect = 1e-04
Identities = 58/263 (22%), Positives = 115/263 (43%), Gaps = 36/263 (13%)
Query: 576 ILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNM--VFLVSAKSRKTLAEWFSPCEN 633
+ LDYDGTL P +D + + + R +VS + R+ ++ + E
Sbjct: 101 MFLDYDGTLSP--IVDDPDRAFMSKKMRNTVRKLAKCFPTAIVSGRCREKVSSFVKLTE- 157
Query: 634 LGIAAEHGYFFR-------LRRDEEWETC------IPVADCGWKQIAEPVMKLYTETTDG 680
L A HG + +++ + C +PV + +K++ E T++ G
Sbjct: 158 LYYAGSHGMDIKGPEQGSKYKKENQSLLCQPATEFLPVINEVYKKLVEK-----TKSIPG 212
Query: 681 STIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEP-VTVKSGQNLVEVKPQ-GV 738
+ +E+ + + + + S +L + + SVL N P + + G+ ++E++P
Sbjct: 213 AKVENNKFCASVHFRCVEENKWS----DLANQVRSVLKNYPKLMLTQGRKVLEIRPIIKW 268
Query: 739 NKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVG 798
+KG + LL ++ F + +GDDR+DED F+++ G I +A
Sbjct: 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGIL--VSKYA---- 322
Query: 799 RKPSKAKYYLDDTVEIVRLMQGL 821
K + A Y L + E++ ++ L
Sbjct: 323 -KETNASYSLQEPDEVMEFLERL 344
|
Length = 354 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 5e-04
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 8/83 (9%)
Query: 705 QAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCV 764
EL L+ + + SG +E+ P+GV+KG K L + + + V+
Sbjct: 152 DLDELEKELKELFGSLITITSSGPGYLEIMPKGVSKGTALKALAKHLG---IDLEEVIAF 208
Query: 765 GDDRSDEDMFEVIISSMAGPSIA 787
GD +D +M E+ AG +A
Sbjct: 209 GDGENDIEMLEL-----AGLGVA 226
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 831 | |||
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 100.0 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 100.0 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 100.0 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 100.0 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 100.0 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 100.0 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 100.0 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 100.0 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 100.0 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 100.0 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| PLN03017 | 366 | trehalose-phosphatase | 100.0 | |
| PLN02151 | 354 | trehalose-phosphatase | 100.0 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 100.0 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 100.0 | |
| PLN02580 | 384 | trehalose-phosphatase | 100.0 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.95 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.94 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.94 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.94 | |
| PLN02887 | 580 | hydrolase family protein | 99.93 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.93 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.93 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.92 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 99.92 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.91 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.9 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.9 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 99.9 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.9 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.89 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 99.88 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.88 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.87 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 99.87 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.86 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 99.86 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 99.86 | |
| PLN02423 | 245 | phosphomannomutase | 99.85 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 99.85 | |
| PLN02316 | 1036 | synthase/transferase | 99.84 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 99.84 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.84 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 99.83 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 99.83 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 99.83 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 99.82 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 99.82 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.81 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 99.8 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 99.8 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.79 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 99.79 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 99.79 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 99.79 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 99.79 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 99.78 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.77 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 99.77 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 99.76 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.76 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 99.75 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 99.74 | |
| PLN00142 | 815 | sucrose synthase | 99.74 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 99.73 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 99.73 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.73 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 99.72 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 99.72 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 99.71 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.7 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.7 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.7 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.69 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 99.69 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 99.69 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.68 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.68 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 99.68 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.67 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.67 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 99.67 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.67 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.67 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.66 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.66 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.65 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.65 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.62 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 99.6 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.6 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 99.59 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.58 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.58 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.55 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.55 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.54 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.54 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.52 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.51 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.51 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.51 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 99.5 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.49 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.47 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.45 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.45 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.44 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.4 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.25 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.24 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 99.22 | |
| PF03332 | 220 | PMM: Eukaryotic phosphomannomutase; InterPro: IPR0 | 99.01 | |
| KOG3189 | 252 | consensus Phosphomannomutase [Lipid transport and | 98.98 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 98.93 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 98.92 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 98.92 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 98.91 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.89 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.88 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 98.86 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 98.82 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 98.78 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 98.74 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 98.73 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 98.71 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.7 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 98.63 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.55 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 98.52 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 98.48 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.46 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.38 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 98.37 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 98.33 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 98.33 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 98.17 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.12 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 98.11 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.05 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 98.02 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.0 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 98.0 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 97.95 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 97.93 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.9 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 97.86 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 97.86 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 97.75 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 97.71 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.67 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.65 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.62 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.56 | |
| PRK06769 | 173 | hypothetical protein; Validated | 97.46 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 97.44 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 97.38 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 97.21 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.02 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 96.97 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 96.94 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 96.89 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 96.86 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 96.83 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 96.79 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 96.78 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 96.76 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 96.67 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 96.65 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 96.6 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.57 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.54 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 96.52 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 96.46 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 96.25 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 96.24 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 96.23 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 96.09 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 96.01 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 95.93 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 95.91 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 95.85 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 95.84 | |
| PRK08238 | 479 | hypothetical protein; Validated | 95.78 | |
| PF06437 | 408 | ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0 | 95.63 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 95.63 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 95.62 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 95.5 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 95.49 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 95.39 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 95.35 | |
| PLN02940 | 382 | riboflavin kinase | 95.14 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 95.06 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 95.03 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 95.02 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 94.98 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 94.95 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 94.93 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 94.86 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 94.86 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 94.78 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 94.76 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 94.57 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 94.52 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 94.52 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 94.48 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 94.32 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 94.31 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 94.3 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 94.27 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 94.27 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 94.14 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 94.02 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 93.96 | |
| PLN02954 | 224 | phosphoserine phosphatase | 93.89 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 93.79 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 93.79 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 93.75 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 93.7 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 93.66 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 93.55 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 93.44 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 93.39 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 93.38 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 93.32 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 93.08 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 93.06 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 92.94 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 92.75 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 92.69 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 92.67 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 92.38 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 92.21 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 92.19 | |
| PLN02954 | 224 | phosphoserine phosphatase | 92.06 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 91.92 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 91.88 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 91.6 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 91.54 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 91.37 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 91.28 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 90.86 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 90.75 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 89.6 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 89.47 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 89.24 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 89.11 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 89.1 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 88.76 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 88.12 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 87.75 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 86.82 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 86.78 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 86.76 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 86.72 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 86.64 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 86.51 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 86.38 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 86.29 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 86.17 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 86.07 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 85.89 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 84.65 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 84.54 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 83.88 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 83.07 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 82.4 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 82.18 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 82.1 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 81.98 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 81.92 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 81.72 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 81.16 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 80.82 |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-188 Score=1675.32 Aligned_cols=828 Identities=92% Similarity=1.455 Sum_probs=778.8
Q ss_pred CCcccccchhhhhcCCCCCccccccCccceeeccccccCCCCCCCCCCCCCCCCCCCCCCcEEEEEcCCccceeecCCCC
Q 044635 1 MVSKSYSNLLELASGEAPSFGRMRRRIPRIMTVAGIISDLDDDPADSVCSDPSSSSVQRDRIIIVANQLPIRAQRKSDNS 80 (831)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~iivsnrlP~~~~~~~~~~ 80 (831)
|+||||+|||||++||++.++++.+++|++|++||+++++|+++.++.+++.++++.+.+|+||||||||+.++++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rliiVsnrlPv~~~~~~~g~ 80 (854)
T PLN02205 1 MVSRSYSNLLELASGESPSFGRMNRRIPRIMTVAGIMSDIDDDPSESVCSDPSSSSVPKDRIIIVANQLPIRAQRKSDGS 80 (854)
T ss_pred CcChhhccHHHhccCCcccccccccCCCceecCCCcccccccccccccccccccCCCCCCcEEEEEccCceEEEEcCCCC
Confidence 89999999999999999999999999999999999999999988877777776566777999999999999999876654
Q ss_pred CCeEEeeCCCchHHHhhhccCCCCCCeEEEeccCCcCCcchhhhHhHhhccCeeEEEEeCChHhhhhHhhhhhccccccc
Q 044635 81 KGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVNEQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPL 160 (831)
Q Consensus 81 ~~~~~~~~~~~l~~~l~~~l~~~~~~~~wvG~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~gf~~~~lWp~ 160 (831)
++|+|++++|||+++|++++.....+++||||+|.++++++|+++.+.++++|+|+||||+++++++||+||||++|||+
T Consensus 81 ~~~~~~~~~ggL~~~l~~~~~~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv~l~~~~~~~~Y~gf~n~~LWPl 160 (854)
T PLN02205 81 KGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNEQEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPL 160 (854)
T ss_pred cceEEEeCCCchHHHHhhhhhcccCceEEEEecCCCCCchhhhhHHHHHhcCceEEEeeCCHHHHHHHHHhhhhccccch
Confidence 68999999999999999988642268999999999888888888888888899999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChH
Q 044635 161 FHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240 (831)
Q Consensus 161 ~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e 240 (831)
|||+++..|+++.+|+++.|++|++||++||++|+++++|++|+|||||||||+||+|||+++|+++||||||||||++|
T Consensus 161 fH~~~~~~~~~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~e 240 (854)
T PLN02205 161 FHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240 (854)
T ss_pred hccCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChH
Confidence 99998888887779999999999999999999999999986799999999999999999999999999999999999999
Q ss_pred HhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCC
Q 044635 241 IYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSL 320 (831)
Q Consensus 241 ~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~ 320 (831)
+||+||||+|||+|||+||+|||||++|+|||++||+|+||+++..++|.++++|+||.++|+++|+|||++.|...+..
T Consensus 241 ifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~ 320 (854)
T PLN02205 241 IYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSL 320 (854)
T ss_pred HHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999888888899999999999999999999999999999
Q ss_pred cchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHH
Q 044635 321 PGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYS 400 (831)
Q Consensus 321 ~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~ 400 (831)
+++.+++++++++++.+|+++|+||||+|++|||.+||+||++||++||+|+|||+||||++|+|+++++|++++++|++
T Consensus 321 ~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~ 400 (854)
T PLN02205 321 PETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHS 400 (854)
T ss_pred hhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHH
Confidence 99999999999999433799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCC--------CCC---------------CCCce
Q 044635 401 TVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSE--------PSS---------------PKKSM 457 (831)
Q Consensus 401 lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma--------~~~---------------~~~g~ 457 (831)
+|++||++||+.+|+||+|+++.++++|+.|||++||||++||+||||+ |+. +++|+
T Consensus 401 ~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gv 480 (854)
T PLN02205 401 TVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSM 480 (854)
T ss_pred HHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccccCCCCc
Confidence 9999999999999999999999999999999999999999999999993 332 25899
Q ss_pred EEEecccccccccCCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhhhcc
Q 044635 458 LVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCREHVRQR 537 (831)
Q Consensus 458 lVlSe~~G~~~~l~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~~~~ 537 (831)
||+|||+||+++|++|++|||||++++|+||++||+||.+||+.||++++++|++||+.+|+++|+++|.++|++|++++
T Consensus 481 LiLSEfaGaa~~L~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~~~~~~~~~ 560 (854)
T PLN02205 481 LVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHSRRR 560 (854)
T ss_pred eEeeeccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998899
Q ss_pred ccccCcCcceeEeecCcccccCCHHHHHHHHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEEC
Q 044635 538 CWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVS 617 (831)
Q Consensus 538 ~~~~~~g~~~~~~~~~~~f~~l~~~~~~~~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~S 617 (831)
||++|||++||+++++|+|++|+++.++++|+++++|+|++||||||++..+....|+++++++|++|++++++.|+|+|
T Consensus 561 ~~~~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvS 640 (854)
T PLN02205 561 CWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVS 640 (854)
T ss_pred hcccccccccccccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEe
Confidence 99999999999999999999999999999999999999999999999996544668999999999999999999999999
Q ss_pred CCCHhhHHHHhCCCCCceEEecCCEEEEeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccC
Q 044635 618 AKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDA 697 (831)
Q Consensus 618 GR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~ 697 (831)
||++..+++||+.+++++++||||++++++++..|+......+..|++.+.++++.|.+++||+++|.|+++++|||+++
T Consensus 641 GR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~a 720 (854)
T PLN02205 641 ARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDA 720 (854)
T ss_pred CCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhhhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhC
Confidence 99999999999988779999999999999887789765544467899999999999999999999999999999999999
Q ss_pred CCccchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHc
Q 044635 698 DPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVI 777 (831)
Q Consensus 698 d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a 777 (831)
||+++..+++++..+++..+.+.++.+.+|+.++||+|+++|||.|+++|++.+...|+++++++|||||.|||+||+++
T Consensus 721 dpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~ 800 (854)
T PLN02205 721 DPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVI 800 (854)
T ss_pred ChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHh
Confidence 99999999999999999999888888999999999999999999999999976544588999999999999999999999
Q ss_pred chhcCCCCCCCCCceEEEEeCCCCcccceEeCChhHHHHHHHHHHhhhccC
Q 044635 778 ISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDTVEIVRLMQGLACVADQM 828 (831)
Q Consensus 778 ~~~~~~~~~~~~~~~~~v~vG~~~s~A~y~l~d~~eV~~~L~~L~~~~~~~ 828 (831)
+....+..+++.+++|+|+||.++|+|+|+|+|+++|+++|+.|++.+.+.
T Consensus 801 ~~~~~g~~~~~~~~~~~v~VG~~~S~A~y~L~d~~eV~~lL~~L~~~~~~~ 851 (854)
T PLN02205 801 TSSMAGPSIAPRAEVFACTVGQKPSKAKYYLDDTAEIVRLMQGLASVSEQI 851 (854)
T ss_pred hhhccCCcccccccceeEEECCCCccCeEecCCHHHHHHHHHHHHhcchhh
Confidence 854444456677788999999999999999999999999999999988764
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-157 Score=1399.11 Aligned_cols=739 Identities=36% Similarity=0.671 Sum_probs=663.2
Q ss_pred CCcEEEEEcCCccceeecCCCCCCeEEeeCCCchHHHhhhccCCCCCCeEEEeccCCcCCcc-hhhhHhHhhccCeeEEE
Q 044635 59 RDRIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVN-EQDEVSQILLDTFKCVP 137 (831)
Q Consensus 59 ~~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~wvG~~~~~~~~~-~~~~~~~~~~~~~~~~p 137 (831)
+.|+||||||||+.++++++ |+|+++++.|||+++|.+ + +. .+++||||+|..++.+ +++.+... +.+|+|+|
T Consensus 93 ~~rlIiVSNRlPv~~~~~~~--g~~~~~~s~GGLvsaL~~-~-~~-~~~~WVGw~g~~~~~~~~~~~~~~~-l~~~~~~p 166 (934)
T PLN03064 93 RQRLLVVANRLPVSAVRRGE--DSWSLEISAGGLVSALLG-V-KE-FEARWIGWAGVNVPDEVGQKALTKA-LAEKRCIP 166 (934)
T ss_pred CCCEEEEECCCCcceeecCC--CceEEeECCCCcHHHhcc-c-cc-CCeEEEeeCCCCCCCcchhHHHHHH-hccCceEE
Confidence 68999999999999988765 689999999999999975 5 44 7999999999877654 44555444 57899999
Q ss_pred EeCChHhhhhHhhhhhccccccccccCC-CCCCC-CCCccChhhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccch
Q 044635 138 TFLPPDLFSRYYHGFCKQQLWPLFHYML-PLSPD-LGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVL 215 (831)
Q Consensus 138 v~l~~~~~~~~y~gf~~~~lWp~~H~~~-~~~~~-~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~ll 215 (831)
|||+++++++||+||||++|||+|||+. +..+. ...+|++++|++|++||++||++|+++++| +|+|||||||||+|
T Consensus 167 V~l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-gD~VWVHDYHL~Ll 245 (934)
T PLN03064 167 VFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEE-GDVVWCHDYHLMFL 245 (934)
T ss_pred EeCCHHHHHHHHHHhhhcccchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhHH
Confidence 9999999999999999999999999973 21110 114688899999999999999999999987 49999999999999
Q ss_pred HHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEE
Q 044635 216 PTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEY 295 (831)
Q Consensus 216 p~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~ 295 (831)
|.|||+++|+++||||||||||++|+|||||+|++||+|||+||+|||||++|++||++||+|+||++... .++.+
T Consensus 246 P~~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~----~~v~~ 321 (934)
T PLN03064 246 PKCLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTP----EGVED 321 (934)
T ss_pred HHHHHHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccC----CeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999998543 35899
Q ss_pred cCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcE
Q 044635 296 YGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKV 375 (831)
Q Consensus 296 ~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~v 375 (831)
+||.++|.++|+|||++.|...+..+++++.++++++++ .++++||+|||||++|||.++|+||++||++||+|++||
T Consensus 322 ~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~--~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kV 399 (934)
T PLN03064 322 QGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERF--AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKV 399 (934)
T ss_pred CCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHh--CCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCE
Confidence 999999999999999999999999999999999999999 899999999999999999999999999999999999999
Q ss_pred EEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCC-------
Q 044635 376 VLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGS------- 448 (831)
Q Consensus 376 vLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGm------- 448 (831)
+||||++|+|+++++|+++++++.++|++||++||+.+|+||+|+.+.++++|+.++|++|||||+||+||||
T Consensus 400 VLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Ey 479 (934)
T PLN03064 400 VLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEF 479 (934)
T ss_pred EEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -CCCCCCCceEEEeccccccccc-CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHH
Q 044635 449 -EPSSPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDL 526 (831)
Q Consensus 449 -a~~~~~~g~lVlSe~~G~~~~l-~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 526 (831)
+|+..++|+||+|||+||+++| .+|++|||||++++|+||.+||+|+++||+.|+++++++|.+||+.+|+++|+++|
T Consensus 480 va~~~~~~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L 559 (934)
T PLN03064 480 VACQDSKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVSEL 559 (934)
T ss_pred HHhhcCCCCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHH
Confidence 4666788999999999999999 58999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccccccCcCcceeEeecCcccccCCHHHHHHHHHhcCceeEEecCCCccCCCCCC-----------CCCCC
Q 044635 527 ERTCREHVRQRCWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASI-----------DKSPN 595 (831)
Q Consensus 527 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~f~~l~~~~~~~~y~~s~~rli~~D~DGTLl~~~~~-----------~~~~s 595 (831)
.++..++.. ++. . -+.+|+.+.+.++|+++++|+||+||||||++..+. ...|+
T Consensus 560 ~~~~~~~~~-~~~-----------~---~~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~ 624 (934)
T PLN03064 560 NDTVVEAQL-RTR-----------Q---VPPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLH 624 (934)
T ss_pred HHHHhhhhc-ccc-----------c---cCCCCCHHHHHHHHHhccceEEEEecCceeccCCCCcccccccccccccCCC
Confidence 988654321 111 1 124799999999999999999999999999986432 23478
Q ss_pred HHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCceEEE-cCCcCCccHHHHHHHHHHHH
Q 044635 596 SKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWET-CIPVADCGWKQIAEPVMKLY 674 (831)
Q Consensus 596 ~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~w~~-~~~~~~~~w~~~v~~il~~~ 674 (831)
++++++|++|+++++|.|+|+|||+.+.+++||+.+ +++++||||++++.+ +..|.. .....+..|++.+.++|++|
T Consensus 625 p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~-~L~LaAEHG~~~R~~-~~~w~~~~~~~~~~~W~~~v~~ile~~ 702 (934)
T PLN03064 625 PELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF-DMWLAAENGMFLRHT-KGEWMTTMPEHLNMDWVDSVKHVFEYF 702 (934)
T ss_pred HHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCC-CceEEeeCCeEEecC-CCcceeccccccchHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999987 799999999999876 457874 33334668999999999999
Q ss_pred hccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHH-HhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhh
Q 044635 675 TETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHL-ESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQE 753 (831)
Q Consensus 675 ~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L-~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~ 753 (831)
++++||+++|.|+++++|||+++||+++..|++++.+++ +..+.+.++.+..|+.+|||+|.++|||.|+++|++.+..
T Consensus 703 ~eRtPGS~IE~K~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~gvnKG~Av~~ll~~~~~ 782 (934)
T PLN03064 703 TERTPRSHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKGAAIDRILGEIVH 782 (934)
T ss_pred HhcCCCcEEEEcCcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcCCCCHHHHHHHHHHhhhh
Confidence 999999999999999999999999999999999999999 4556677899999999999999999999999999997632
Q ss_pred cC---CCcccEEEEcCCch-hHHHHHHcchhcCCC-------------------------------C----------C--
Q 044635 754 RE---MLPDFVLCVGDDRS-DEDMFEVIISSMAGP-------------------------------S----------I-- 786 (831)
Q Consensus 754 ~g---~~~d~vla~GD~~N-De~Mf~~a~~~~~~~-------------------------------~----------~-- 786 (831)
.+ .++|||+|+|||.. ||+||+++..-.... . .
T Consensus 783 ~~~~~~~~DFvlc~GDd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 862 (934)
T PLN03064 783 SKSMTTPIDYVLCIGHFLGKDEDIYTFFEPELPSDSPAIARSRSPDGLKSSGDRRPSGKLPSSRSNSKNSQGKKQRSLLS 862 (934)
T ss_pred ccccCCCCCEEEEeCCCCCCcHHHHHHHhccCCcccccccccccCCcccCCccccccCCCccccccccccccccCCcccc
Confidence 22 36899999999875 999999986521100 0 0
Q ss_pred -------------------C----------CCCceEEEEeCCCCcccceEeCChhHHHHHHHHHHhhhcc
Q 044635 787 -------------------A----------PRAEVFACTVGRKPSKAKYYLDDTVEIVRLMQGLACVADQ 827 (831)
Q Consensus 787 -------------------~----------~~~~~~~v~vG~~~s~A~y~l~d~~eV~~~L~~L~~~~~~ 827 (831)
+ ...+.|+|+||.|.|+|+|++++.+||+.+|+.|++.++.
T Consensus 863 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (934)
T PLN03064 863 SAKSGVNHAASHGSDRRPSPEKIGWSVLDLKGENYFSCAVGRKRSNARYLLGSSDDVVSFLKELANASSS 932 (934)
T ss_pred cccccccccccCCccccCCccccccccccccCcceEEEEeccccccceeecCCHHHHHHHHHHHhccccC
Confidence 0 1234599999999999999999999999999999998765
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-150 Score=1346.49 Aligned_cols=741 Identities=36% Similarity=0.673 Sum_probs=659.1
Q ss_pred CCCCcEEEEEcCCccceeecCCCCCCeEEeeCCCchHHHhhhccCCCCCCeEEEeccCCcCCcc-hhhhHhHhhccCeeE
Q 044635 57 VQRDRIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVN-EQDEVSQILLDTFKC 135 (831)
Q Consensus 57 ~~~~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~wvG~~~~~~~~~-~~~~~~~~~~~~~~~ 135 (831)
...+||||||||||+.+.++++ |+|++++++|||+.+|.+ +. . .+++||||+|.+++++ ++..+. ..+.+|+|
T Consensus 8 ~~~~rliiVsnrlp~~~~~~~~--~~~~~~~~~ggl~~al~~-~~-~-~~~~Wvgw~g~~~~~~~~~~~~~-~~~~~~~~ 81 (797)
T PLN03063 8 GERPRLLVVANRLPVSAKRTGE--DSWSLEMSPGGLVSALLG-VK-E-FETKWIGWPGVDVHDEIGKAALT-ESLAEKGC 81 (797)
T ss_pred cCCCCEEEEECCCCccceecCC--CceEEeeCCCCHHHHHHH-HH-h-cCceEEEeCCCcCCcccchhHHH-HHhhcCCe
Confidence 3578999999999999887654 689999999999999985 44 3 6999999999876554 333333 34678999
Q ss_pred EEEeCChHhhhhHhhhhhccccccccccC-CCCCCC-CCCccChhhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccc
Q 044635 136 VPTFLPPDLFSRYYHGFCKQQLWPLFHYM-LPLSPD-LGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLM 213 (831)
Q Consensus 136 ~pv~l~~~~~~~~y~gf~~~~lWp~~H~~-~~~~~~-~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~ 213 (831)
+|||| ++++++||+||||++|||+|||+ .+..+. ...+|.++.|++|++||++||++|++.+++ +|+|||||||||
T Consensus 82 ~pv~l-~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~d~vWvhDYhL~ 159 (797)
T PLN03063 82 IPVFL-NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEE-GDVVWCHDYHLM 159 (797)
T ss_pred EEeeh-HHHHHHHHHHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhh
Confidence 99999 99999999999999999999998 232222 114566789999999999999999999987 499999999999
Q ss_pred chHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeE
Q 044635 214 VLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGL 293 (831)
Q Consensus 214 llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~ 293 (831)
+||+|||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||+++|+|++|++.... .+
T Consensus 160 llp~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~----~i 235 (797)
T PLN03063 160 FLPQYLKEYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHE----GV 235 (797)
T ss_pred hHHHHHHHhCCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCC----ce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999875432 47
Q ss_pred EEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCC
Q 044635 294 EYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQG 373 (831)
Q Consensus 294 ~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~ 373 (831)
.++|+.++|.++|+|||++.|.+....+.+.....++++++ .++++|++|||||+.|||..+|+||++||+++|++++
T Consensus 236 ~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~ 313 (797)
T PLN03063 236 VDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFF--AGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRD 313 (797)
T ss_pred EECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhc--CCCeEEEEecccccccCHHHHHHHHHHHHHhCccccC
Confidence 89999999999999999999988777777777788889888 7899999999999999999999999999999999999
Q ss_pred cEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCC-----
Q 044635 374 KVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGS----- 448 (831)
Q Consensus 374 ~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGm----- 448 (831)
+++||||+.|+|+++++|+++++++.+++++||++||+.+|.||+++.+.++.+++.++|++|||||+||++|||
T Consensus 314 kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~l 393 (797)
T PLN03063 314 KVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSY 393 (797)
T ss_pred cEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ---CCCCCCCceEEEeccccccccc-CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHH
Q 044635 449 ---EPSSPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQ 524 (831)
Q Consensus 449 ---a~~~~~~g~lVlSe~~G~~~~l-~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 524 (831)
+|..+..|++|+|||+|+++++ .+|++|||||++++|+||.++|+|+++||+.|+++++++|.+||+.+|+++|++
T Consensus 394 EamA~g~p~~gvlVlSe~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~ 473 (797)
T PLN03063 394 EFVACQKAKKGVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMS 473 (797)
T ss_pred hHheeecCCCCCEEeeCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCHHHHHHHHHH
Confidence 4555678899999999999999 589999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhccccccCcCcceeEeecCcccccCCHHHHHHHHHhcCceeEEecCCCccCCCCC-----CCCCCCHHHH
Q 044635 525 DLERTCREHVRQRCWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRAILLDYDGTLMPQAS-----IDKSPNSKTI 599 (831)
Q Consensus 525 ~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~f~~l~~~~~~~~y~~s~~rli~~D~DGTLl~~~~-----~~~~~s~~~~ 599 (831)
+|.++++.+..+. ...+.+|+.+.+.++|+++++|+||+||||||++..+ ....|+++++
T Consensus 474 ~l~~~~~~~~~~~---------------~~~~~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~ 538 (797)
T PLN03063 474 ELNDIIVEAELRT---------------RNIPLELPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQIKEMDLGLHPELK 538 (797)
T ss_pred HHHHHhhhhhhcc---------------cCCCCCCCHHHHHHHHHhccCeEEEEecCccccCCCCCccccccCCCCHHHH
Confidence 9999887643211 1234579999999999999999999999999998643 2245899999
Q ss_pred HHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCceEEEcC-CcCCccHHHHHHHHHHHHhccC
Q 044635 600 DILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWETCI-PVADCGWKQIAEPVMKLYTETT 678 (831)
Q Consensus 600 ~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~w~~~~-~~~~~~w~~~v~~il~~~~e~~ 678 (831)
++|++|+++++|.|+|+|||+.+.+++|++.+ +++++||||++++.+ +..|.... ...+..|++.+.++|++|++++
T Consensus 539 ~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~-~l~l~aeHG~~~r~~-~~~w~~~~~~~~~~~w~~~v~~~l~~~~~rt 616 (797)
T PLN03063 539 ETLKALCSDPKTTVVVLSRSGKDILDKNFGEY-NIWLAAENGMFLRHT-SGEWVTTMPEHMNLDWVDGVKNVFKYFTDRT 616 (797)
T ss_pred HHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCC-CCcEEEeCCEEEecC-CCceeeccccccChhHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999875 799999999999876 45787543 2335789999999999999999
Q ss_pred CCeeEeeccceEEEeeccCCCccchHHHHHHHHHHH-hHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhc---
Q 044635 679 DGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLE-SVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQER--- 754 (831)
Q Consensus 679 ~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~-~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~--- 754 (831)
||+++|.|+++++|||+++||+++..++.++.+++. ..+.+.++.+..|+.+|||+|+++|||.|+++|++.+...
T Consensus 617 pGs~iE~K~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~gvnKG~Av~~ll~~~~~~~~~ 696 (797)
T PLN03063 617 PRSYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAIGRILGEIVHNKSM 696 (797)
T ss_pred CCcEEEEcCeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcCCCChHHHHHHHHHHhhhcccc
Confidence 999999999999999999999999999999999984 4556678999999999999999999999999999976321
Q ss_pred CCCcccEEEEcCCc-hhHHHHHHcchhcCC--------C-----------CCCCCCceEEEEeCCCCcccceEeCChhHH
Q 044635 755 EMLPDFVLCVGDDR-SDEDMFEVIISSMAG--------P-----------SIAPRAEVFACTVGRKPSKAKYYLDDTVEI 814 (831)
Q Consensus 755 g~~~d~vla~GD~~-NDe~Mf~~a~~~~~~--------~-----------~~~~~~~~~~v~vG~~~s~A~y~l~d~~eV 814 (831)
+..+|||+|+||+. .||+||+++...... . .....+++|+|+||.++|+|+|||+|++||
T Consensus 697 ~~~~dfvl~~Gdd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VG~~~s~A~y~l~~~~eV 776 (797)
T PLN03063 697 TTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYFSCAIGQARTKARYVLDSSNDV 776 (797)
T ss_pred CCCCCEEEEeCCCCCCcHHHHHhccccccccccccccccccccccccccccccccCceEEEEECCCCccCeecCCCHHHH
Confidence 23679999999984 699999998742100 0 012356789999999999999999999999
Q ss_pred HHHHHHHHhhhccC
Q 044635 815 VRLMQGLACVADQM 828 (831)
Q Consensus 815 ~~~L~~L~~~~~~~ 828 (831)
+++|+.|++...+.
T Consensus 777 ~~lL~~l~~~~~~~ 790 (797)
T PLN03063 777 VSLLHKLAVANTTM 790 (797)
T ss_pred HHHHHHHhccCccc
Confidence 99999999876553
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-140 Score=1271.01 Aligned_cols=712 Identities=37% Similarity=0.669 Sum_probs=649.0
Q ss_pred CcEEEEEcCCccceeecCCCCCCeEEeeCCCchHHHhhhccCCCCCCeEEEeccCCcCCc---chhhhHhHhhccCeeEE
Q 044635 60 DRIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHV---NEQDEVSQILLDTFKCV 136 (831)
Q Consensus 60 ~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~wvG~~~~~~~~---~~~~~~~~~~~~~~~~~ 136 (831)
+||||||||||+.+.+++ |+|++++++|||+.+|.+.+.+ .+++||||+|.+.+. .++.++. ..+.+|+|+
T Consensus 1 ~~livvsnr~p~~~~~~~---~~~~~~~~~ggl~~~l~~~~~~--~~~~wvg~~g~~~~~~~~~~~~~~~-~~~~~~~~~ 74 (726)
T PRK14501 1 SRLIIVSNRLPVTVVRED---GGVELTPSVGGLATGLRSFHER--GGGLWVGWPGLDLEEESEEQRARIE-PRLEELGLV 74 (726)
T ss_pred CCEEEEEcCCCcceeecC---CceEEeeCCCchHHHHHHHhhc--CCeEEEEeCCCCccccchhhhhhhh-hhccCceEE
Confidence 489999999999988764 5899999999999999876654 689999999976543 2223333 446789999
Q ss_pred EEeCChHhhhhHhhhhhccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchH
Q 044635 137 PTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLP 216 (831)
Q Consensus 137 pv~l~~~~~~~~y~gf~~~~lWp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp 216 (831)
||||++++++.||+||||++|||+|||+++. ..|++++|++|++||++||++|++.++++ |+|||||||||+||
T Consensus 75 ~v~l~~~~~~~~y~gf~n~~lWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~~~~~~~~~-d~vwvhDYhl~l~p 148 (726)
T PRK14501 75 PVFLSAEEVDRYYEGFCNSTLWPLFHYFPEY-----TEFEDRFWESYERVNQRFAEAIAAIARPG-DVVWVHDYQLMLLP 148 (726)
T ss_pred EEeCCHHHHHHHHHHhhhccccchhcccCcc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEeCchhhhHH
Confidence 9999999999999999999999999999865 47999999999999999999999999974 99999999999999
Q ss_pred HHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEc
Q 044635 217 TFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYY 296 (831)
Q Consensus 217 ~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~ 296 (831)
++||+++|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||+|+++++... .+++++
T Consensus 149 ~~lr~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~----~~~~~~ 224 (726)
T PRK14501 149 AMLRERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETEL----GEIRLG 224 (726)
T ss_pred HHHHhhCCCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCC----CeEEEC
Confidence 9999999999999999999999999999999999999999999999999999999999999999987532 258899
Q ss_pred CEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEE
Q 044635 297 GRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVV 376 (831)
Q Consensus 297 gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vv 376 (831)
|+.++|.++|+|||++.|.+....+.+....+++++.+ .++++|++|||+++.||+..+|+||++|++++|+++|+++
T Consensus 225 gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~ 302 (726)
T PRK14501 225 GRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDL--RGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVR 302 (726)
T ss_pred CEEEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHc--CCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEE
Confidence 99999999999999999998887777777788888888 8899999999999999999999999999999999999999
Q ss_pred EEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCC--------
Q 044635 377 LVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGS-------- 448 (831)
Q Consensus 377 Lvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGm-------- 448 (831)
|+||+.|+|.+.++|+++++++.+++++||++||+.+|+||+++.+.++++|+.++|++|||||+||++|||
T Consensus 303 lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eam 382 (726)
T PRK14501 303 LVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYV 382 (726)
T ss_pred EEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEE
Confidence 999999999888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceEEEecccccccccCCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHH
Q 044635 449 EPSSPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLER 528 (831)
Q Consensus 449 a~~~~~~g~lVlSe~~G~~~~l~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 528 (831)
+|..+..|++|+|+++|+++++.+|++|||||++++|+||.++|+|+.+|++.|++++++++.++|+.+|+++|++++.+
T Consensus 383 a~~~~~~g~~vls~~~G~~~~l~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~ 462 (726)
T PRK14501 383 ASRTDGDGVLILSEMAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELRE 462 (726)
T ss_pred EEcCCCCceEEEecccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 34445568999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccccccCcCcceeEeecCcccccCCHHHHHHHHHhcCceeEEecCCCccCCCCC--CCCCCCHHHHHHHHHHh
Q 044635 529 TCREHVRQRCWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRAILLDYDGTLMPQAS--IDKSPNSKTIDILNSLC 606 (831)
Q Consensus 529 ~~~~~~~~~~~~~~~g~~~~~~~~~~~f~~l~~~~~~~~y~~s~~rli~~D~DGTLl~~~~--~~~~~s~~~~~~L~~L~ 606 (831)
+++++.... +..++.++.+.+.++|+.+++|+|++||||||++... ....++++++++|++|+
T Consensus 463 ~~~~~~~~~---------------~~~~~~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~ 527 (726)
T PRK14501 463 AAEKNKAFA---------------SKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLA 527 (726)
T ss_pred HHhhhhccc---------------cccCCccCHHHHHHHHHhccceEEEEecCccccCCCCCcccCCCCHHHHHHHHHHH
Confidence 887653211 1235678999999999999999999999999998532 23568999999999999
Q ss_pred hcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeec
Q 044635 607 RDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDK 686 (831)
Q Consensus 607 ~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k 686 (831)
+++|+.|+|+|||++..++++++.+ ++++|++||++++.+ ++.|..... .+..|++.+.++++.|.++++|+++|.|
T Consensus 528 ~d~g~~V~ivSGR~~~~l~~~~~~~-~l~liaenG~~i~~~-~~~w~~~~~-~~~~w~~~v~~il~~~~~~~~gs~ie~k 604 (726)
T PRK14501 528 ADPNTDVAIISGRDRDTLERWFGDL-PIHLVAEHGAWSRAP-GGEWQLLEP-VATEWKDAVRPILEEFVDRTPGSFIEEK 604 (726)
T ss_pred cCCCCeEEEEeCCCHHHHHHHhCCC-CeEEEEeCCEEEeCC-CCceEECCC-cchhHHHHHHHHHHHHHhcCCCcEEEEc
Confidence 9889999999999999999999876 589999999999865 457875433 4678999999999999999999999999
Q ss_pred cceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcC
Q 044635 687 ETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGD 766 (831)
Q Consensus 687 ~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD 766 (831)
+.+++|||+++|++++..+++++.++++..+.+.++.+.+|+.++||+|+++|||.|++++++ ++++++++||||
T Consensus 605 ~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~-----~~~~d~vl~~GD 679 (726)
T PRK14501 605 EASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLE-----AGPYDFVLAIGD 679 (726)
T ss_pred ceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHh-----cCCCCEEEEECC
Confidence 999999999999999988899999999998888888899999999999999999999999998 467899999999
Q ss_pred CchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCCcccceEeCChhHHHHHHHHHHh
Q 044635 767 DRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDTVEIVRLMQGLAC 823 (831)
Q Consensus 767 ~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~s~A~y~l~d~~eV~~~L~~L~~ 823 (831)
|.||++||+.++. ..++|+||++++.|+|+++++++|+++|+.|++
T Consensus 680 ~~nDe~Mf~~~~~-----------~~~~v~vG~~~s~A~~~l~~~~eV~~~L~~l~~ 725 (726)
T PRK14501 680 DTTDEDMFRALPE-----------TAITVKVGPGESRARYRLPSQREVRELLRRLLD 725 (726)
T ss_pred CCChHHHHHhccc-----------CceEEEECCCCCcceEeCCCHHHHHHHHHHHhc
Confidence 9999999999752 138999999999999999999999999999985
|
|
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-130 Score=1136.30 Aligned_cols=720 Identities=55% Similarity=0.964 Sum_probs=676.3
Q ss_pred CCcEEEEEcCCccceeecCCCCCCeEEeeCCCchHHHhhhccCCCCCCeEEEeccCCcCCcchhhhHhHhhccCeeEEEE
Q 044635 59 RDRIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVNEQDEVSQILLDTFKCVPT 138 (831)
Q Consensus 59 ~~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~wvG~~~~~~~~~~~~~~~~~~~~~~~~~pv 138 (831)
..|+|+|||+||+.+.++.++ +.|.|+++.+||+.++..++.+ ++..||||++.++++++++.+.+.++..++|+||
T Consensus 2 ~~r~i~vsn~lp~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~--~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~~pv 78 (732)
T KOG1050|consen 2 RPRIIVVSNRLPLKASKRTDT-GKWSFSFSPGSLVSQLKGIFRE--MEVKWVGPLGDELDDSEKEDVSQELLEEFDSVPV 78 (732)
T ss_pred CceEEEEEccCceecccccCC-CceeeecCCCCchhhhhccccc--ceeeEEeeccccCchhhHhHhhhhhhhhcCceee
Confidence 469999999999998655555 7999999999999999887764 7999999999889999999999999999999999
Q ss_pred eCChHhhhhHhhhhhccccccccccC-CCCCCCCCCccChhhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHH
Q 044635 139 FLPPDLFSRYYHGFCKQQLWPLFHYM-LPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPT 217 (831)
Q Consensus 139 ~l~~~~~~~~y~gf~~~~lWp~~H~~-~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~ 217 (831)
+++++...++|+||||++|||+|||+ .+..+.+. .|+.+.|++|+++|+.||++|++.++ ++|+|||||||||++|+
T Consensus 79 ~~~~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~~~-~~~~~~w~~y~~~n~~f~d~ive~~~-~~d~vwihdyhlmllp~ 156 (732)
T KOG1050|consen 79 FLDDELFDSYYNGYCKSILWPLFHYMLIPSEPAFK-LFDLELWKAYVKVNQAFADKIVEVYE-EGDIVWIHDYHLMLLPQ 156 (732)
T ss_pred ecCCchhhhhhhhhhhhcccceeecccCCCchhhh-hhHHHHHHHHHHHhHHHHHHHHHhcc-CCCcEEEEcchhhccch
Confidence 99999999999999999999999999 66666654 78899999999999999999999999 57999999999999999
Q ss_pred HHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcC
Q 044635 218 FLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYG 297 (831)
Q Consensus 218 ~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~g 297 (831)
|+|++.++++||||+|+|||++|+|+|+|.|+|||+||++||+|||||++|+|||++||.|++++++.+.++..++.+.|
T Consensus 157 ~lr~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rg 236 (732)
T KOG1050|consen 157 MLRERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRG 236 (732)
T ss_pred hhhcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEE
Q 044635 298 RTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVL 377 (831)
Q Consensus 298 r~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvL 377 (831)
|.+.|.+.|+|||+.+|......+.+..+..+++..+ +|+++|++|||+|+.||+..++.||+++|++||+|+++|+|
T Consensus 237 r~~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~--~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvl 314 (732)
T KOG1050|consen 237 RDVSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPF--KGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVL 314 (732)
T ss_pred ceeeeeecccccchHHhhccccchhHHHHHHHHhhhc--cCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEE
Confidence 9999999999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCC--------
Q 044635 378 VQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSE-------- 449 (831)
Q Consensus 378 vqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma-------- 449 (831)
+||++|+++++++|++++.++..++.+||++||+..++||+++...++..++.++|.+||+|++++++||||
T Consensus 315 iqi~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~ 394 (732)
T KOG1050|consen 315 IQIENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYIL 394 (732)
T ss_pred EEEecCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999994
Q ss_pred CCCCCCceEEEeccccccccc-CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHH
Q 044635 450 PSSPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLER 528 (831)
Q Consensus 450 ~~~~~~g~lVlSe~~G~~~~l-~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 528 (831)
|...+.+++|+|||+||++.+ ++++++||||.+++|.+|..||+|+++|+..|+.++++++..|++..|+.+|++.+
T Consensus 395 ~~~~~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~~~~~~~l-- 472 (732)
T KOG1050|consen 395 CQENKKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWAKSFLQGL-- 472 (732)
T ss_pred hhcccCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHHHHHHHhh--
Confidence 455667999999999999999 89999999999999999999999999999999999999999999999999999944
Q ss_pred HHHHhhhccccccCcCcceeEeecCcccccCCHHHHHHHHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhc
Q 044635 529 TCREHVRQRCWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRD 608 (831)
Q Consensus 529 ~~~~~~~~~~~~~~~g~~~~~~~~~~~f~~l~~~~~~~~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d 608 (831)
++||+.|+ +.+++..+ |+.+.+++.|+++++|+|++|||||+++..+.. +...|+.||.|
T Consensus 473 -------~~~~~~~~-~~~~~~~~------l~~~~~i~~y~~s~~rli~ldyd~t~~~~~~~~------~~~~l~~L~~d 532 (732)
T KOG1050|consen 473 -------KRIWKVGF-LGFRVTPL------LTAEHIVSDYKKSKKRLILLDYDLTLIPPRSIK------AISILKDLCSD 532 (732)
T ss_pred -------hhhhhhcc-cccccccc------cChhHhhhhhhhccceEEEecccccccCCCCch------HHHHHHHHhcC
Confidence 45677788 78887665 889999999999999999999999999844322 99999999999
Q ss_pred CCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccc
Q 044635 609 KNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKET 688 (831)
Q Consensus 609 ~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~ 688 (831)
|+|.|+|+|||++..+..|+..++++|++||||++++.+++ |+... .+.+|++.+.+++++|++||||+++|.|++
T Consensus 533 p~n~v~i~s~~~r~~l~~~~~~~~~lgl~aEhG~f~r~~~~--w~~~~--~~~~w~~~v~~i~~~~~ert~GS~ie~k~~ 608 (732)
T KOG1050|consen 533 PKNIVYIVSGRGRSVLEKWFFGCKNLGLAAEHGYFVRIPGK--WETCV--LDLDWKDLVKDIFQYYTERTPGSYIERKET 608 (732)
T ss_pred CCCeEEEEEccCchhhhhhccccccceeecccCceeccCCc--eeeec--ccccHHHHHHHHHHHHHhcCCCceecccCc
Confidence 99999999999999999999999999999999999999876 99876 689999999999999999999999999999
Q ss_pred eEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCc
Q 044635 689 ALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDR 768 (831)
Q Consensus 689 ~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~ 768 (831)
+++|||+++||+++.+||+++.++|+. .+.++.++.|+..|||.|.|+|||.++++++..+ ..++||++|+||+.
T Consensus 609 ~l~~hy~~ad~~~g~~qA~el~~~l~~--~~~~~~v~~g~~~Vev~~~gvsk~~~~~~~~~~~---~~~~df~~c~g~d~ 683 (732)
T KOG1050|consen 609 ALVWHYRNADPEFGELQAKELLEHLES--KNEPVEVVRGKHIVEVRPQGVSKGLAAERILSEM---VKEPDFVLCIGDDR 683 (732)
T ss_pred eEEEeeeccCcchhHHHHHHHHHHhcc--cCCCeEEEecCceEEEcccccchHHHHHHHHHhc---CCCcceEEEecCCC
Confidence 999999999999999999999999998 7889999999999999999999999999999987 45679999999999
Q ss_pred hhHHHHHHcchhcCCCCCCCCCceEEEEeCCCCcccceEeCChhHHHHHHH
Q 044635 769 SDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDTVEIVRLMQ 819 (831)
Q Consensus 769 NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~s~A~y~l~d~~eV~~~L~ 819 (831)
.|++||.++........ ....|+|+||.++|+|+|+++++.||+++|+
T Consensus 684 tDed~~~~~~~~~~~~~---~~~~F~~~~g~~~t~a~~~~~~~~~v~~~l~ 731 (732)
T KOG1050|consen 684 TDEDMFEFISKAKDPEK---VEEIFACTVGQKPSKAKYFLDDTHEVIRLLQ 731 (732)
T ss_pred ChHHHHHHHhhccCCcc---cceEEEEEcCCCCcccccccCChHHHHhhcc
Confidence 99999999986532221 1678999999999999999999999999986
|
|
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-117 Score=985.30 Aligned_cols=446 Identities=28% Similarity=0.551 Sum_probs=410.5
Q ss_pred CcEEEEEcCCccceeecCCCCCCeEEeeCCCchHHHhhhccCCCCCCeEEEeccCCcCCcchhhhHhHhhccCeeEEEEe
Q 044635 60 DRIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVNEQDEVSQILLDTFKCVPTF 139 (831)
Q Consensus 60 ~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~wvG~~~~~~~~~~~~~~~~~~~~~~~~~pv~ 139 (831)
+||||||||+|+.. + + +.++|||+++|.+.+.+ .+++||||+|...++ .+.+......+|+|.||+
T Consensus 2 ~rLivVSNRlp~~~-----~---~--~~~~GGL~~aL~~~l~~--~~g~WvGW~g~~~~~--~~~~~~~~~~~~~~~~v~ 67 (474)
T PRK10117 2 SRLVVVSNRIAPPD-----E---H--KASAGGLAVGILGALKA--AGGLWFGWSGETGNE--DQPLKKVKKGNITWASFN 67 (474)
T ss_pred CCEEEEECCCcCCC-----C---C--CcCCCCcHHHHHHHHHh--cCceEEEecCCCCCC--cccchhhhcCCceEEEec
Confidence 68999999999622 1 1 34568999999998765 599999999964322 222433334679999999
Q ss_pred CChHhhhhHhhhhhccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHH
Q 044635 140 LPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFL 219 (831)
Q Consensus 140 l~~~~~~~~y~gf~~~~lWp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~l 219 (831)
|+++++++||+||||++|||+|||+++. ..|+++.|++|++||++||++|++.++| +|+|||||||||+||++|
T Consensus 68 L~~~~~~~yY~gfsn~~LWPlfHy~~~~-----~~~~~~~w~~Y~~VN~~FA~~v~~~~~~-~D~VWVHDYhL~llp~~L 141 (474)
T PRK10117 68 LSEQDYDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWEGYLRVNALLADKLLPLLKD-DDIIWIHDYHLLPFASEL 141 (474)
T ss_pred CCHHHHHHHHhhhhhcchhhhhCCCCCc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeccHhhHHHHHH
Confidence 9999999999999999999999999765 5899999999999999999999999997 599999999999999999
Q ss_pred HhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEE
Q 044635 220 RKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRT 299 (831)
Q Consensus 220 r~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~ 299 (831)
|+++|+++||||||||||++|+|++||+|+|||+|||+||+|||||++|++||++||++++|++.... ..+.++||.
T Consensus 142 R~~~~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~---~~v~~~gr~ 218 (474)
T PRK10117 142 RKRGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSG---KSHTAWGKA 218 (474)
T ss_pred HHhCCCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCC---CeEEECCeE
Confidence 99999999999999999999999999999999999999999999999999999999999999875321 256788999
Q ss_pred EEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 044635 300 VSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQ 379 (831)
Q Consensus 300 ~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvq 379 (831)
++|.++|+|||++.|...+..+ +...++++++++ .++++|+|||||||+|||+++|+||++||++||+|+|||+|+|
T Consensus 219 v~v~~~PigID~~~~~~~a~~~-~~~~~~~lr~~~--~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQ 295 (474)
T PRK10117 219 FRTEVYPIGIEPDEIAKQAAGP-LPPKLAQLKAEL--KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQ 295 (474)
T ss_pred EEEEEEECeEcHHHHHHHhhch-HHHHHHHHHHHc--CCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEE
Confidence 9999999999999999887765 567788999999 7899999999999999999999999999999999999999999
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCC--------CC
Q 044635 380 IANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSE--------PS 451 (831)
Q Consensus 380 ig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma--------~~ 451 (831)
|+.|+|+++++|++++++|+++|++||++||+.+|+||+|+++.++++++.|+|++||||+|||+||||+ |+
T Consensus 296 ia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q 375 (474)
T PRK10117 296 IAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQ 375 (474)
T ss_pred EcCCCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeee
Confidence 9999999999999999999999999999999999999999999999999999999999999999999993 44
Q ss_pred C-CCCceEEEecccccccccCCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHH
Q 044635 452 S-PKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTC 530 (831)
Q Consensus 452 ~-~~~g~lVlSe~~G~~~~l~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 530 (831)
. +++|+||+|||+||+++|.+|++|||||++++|+||++||+||.+||+.|+++++++|.+||+.+|+++||.+|.++.
T Consensus 376 ~~~~~GvLILSefAGaA~~L~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~ 455 (474)
T PRK10117 376 DPANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIV 455 (474)
T ss_pred cCCCCccEEEecccchHHHhCCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhh
Confidence 4 678999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred H
Q 044635 531 R 531 (831)
Q Consensus 531 ~ 531 (831)
.
T Consensus 456 ~ 456 (474)
T PRK10117 456 P 456 (474)
T ss_pred h
Confidence 3
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-115 Score=984.66 Aligned_cols=455 Identities=28% Similarity=0.461 Sum_probs=418.5
Q ss_pred EEcCCccceeecCCCCCCeEEeeCCCchHHHhhhccCCCCCCeEEEeccCCcCCc-chh-hhHhHhhccCeeEEEEeCCh
Q 044635 65 VANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHV-NEQ-DEVSQILLDTFKCVPTFLPP 142 (831)
Q Consensus 65 vsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~wvG~~~~~~~~-~~~-~~~~~~~~~~~~~~pv~l~~ 142 (831)
||||||+.+.++++|..+|++++++|||+++|.+.+.+. .+++||||+|.+.++ ++. ..+......+|+|.||+|++
T Consensus 1 vsnRlP~~~~~~~~g~~~~~~~~s~gGL~~al~~~l~~~-~~g~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 79 (487)
T TIGR02398 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSFFGDG-RAGTWVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSK 79 (487)
T ss_pred CCcCCCceeEECCCCCceEEeccCCCchHHHHHHHhhcc-cceEEEeeCCCCcccccccccccccccCCceeEEEEeCCH
Confidence 799999999987654235888999999999999887554 679999999975221 111 11222224579999999999
Q ss_pred HhhhhHhhhhhccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHHHhh
Q 044635 143 DLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKR 222 (831)
Q Consensus 143 ~~~~~~y~gf~~~~lWp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~~ 222 (831)
++++.||+||||++|||+|||+++. ..|+++.|++|++||++||++|++.+++ +|+|||||||||+||++||++
T Consensus 80 ~~~~~~Y~gf~n~~LWPlfH~~~~~-----~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~d~vWVhDYhL~llp~~LR~~ 153 (487)
T TIGR02398 80 EQVDIFYHITSKEAFWPILHTFPER-----FQFREDDWQVFLKVNRAFAEAACLEAAE-GATVWVHDYNLWLVPGYIRQL 153 (487)
T ss_pred HHHHHHHhhhhhccccccccCCccc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhHHHHHHHHh
Confidence 9999999999999999999998654 5899999999999999999999999987 599999999999999999999
Q ss_pred cCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccC--------------
Q 044635 223 FNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKR-------------- 288 (831)
Q Consensus 223 ~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~-------------- 288 (831)
.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||+|+||+++....
T Consensus 154 ~~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~ 233 (487)
T TIGR02398 154 RPDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALG 233 (487)
T ss_pred CCCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCcccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999998765432
Q ss_pred ---ceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHHHHHH
Q 044635 289 ---GYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLL 365 (831)
Q Consensus 289 ---~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~~~lL 365 (831)
..+++.++||.++|+++|+|||++.|.+....+++.+.++++|+++ .++++|++|||||++|||+++|+||++||
T Consensus 234 ~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~--~~~kiIl~VDRLDy~KGI~~kl~Afe~~L 311 (487)
T TIGR02398 234 EERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSEL--AGVKLILSAERVDYTKGILEKLNAYERLL 311 (487)
T ss_pred ccccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHc--CCceEEEEecccccccCHHHHHHHHHHHH
Confidence 1235889999999999999999999999888888989999999999 78999999999999999999999999999
Q ss_pred HhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCc
Q 044635 366 IQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVR 445 (831)
Q Consensus 366 ~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~ 445 (831)
++||+++||++|||||.|+|++.++|++++++++++|++||++||+.+|+||+++++.++++++.+||++||||++||+|
T Consensus 312 ~~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lr 391 (487)
T TIGR02398 312 ERRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLR 391 (487)
T ss_pred HhCccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCC--------CCCCCCCceEEEecccccccccCCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHH
Q 044635 446 DGS--------EPSSPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGY 517 (831)
Q Consensus 446 eGm--------a~~~~~~g~lVlSe~~G~~~~l~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 517 (831)
||| +|+.+++|+||+|||+||+++|.+|++|||||++++|+||.+||+||.+||+.|+++++++|.+||+.+
T Consensus 392 DGmNLVa~Eyva~~~~~~GvLILSefaGaa~~l~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~ 471 (487)
T TIGR02398 392 DGLNLVAKEYVAAQGLLDGVLVLSEFAGAAVELKGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQR 471 (487)
T ss_pred cccCcchhhHHhhhcCCCCCEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHH
Confidence 999 455677899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 044635 518 WARSFLQDLER 528 (831)
Q Consensus 518 W~~~~l~~l~~ 528 (831)
|+++||.+|..
T Consensus 472 W~~~fl~~l~~ 482 (487)
T TIGR02398 472 WADEFLAAVSP 482 (487)
T ss_pred HHHHHHHHhhh
Confidence 99999999864
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-116 Score=993.11 Aligned_cols=459 Identities=46% Similarity=0.859 Sum_probs=351.7
Q ss_pred cEEEEEcCCccceeecCCCCCC--eEEeeCCCchHHHhhhccCCCCCCeEEEeccCCcCCcch--hhhHhHhhccCeeEE
Q 044635 61 RIIIVANQLPIRAQRKSDNSKG--WIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVNE--QDEVSQILLDTFKCV 136 (831)
Q Consensus 61 r~iivsnrlP~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~l~~~~~~~~wvG~~~~~~~~~~--~~~~~~~~~~~~~~~ 136 (831)
|+||||||||+.++++++. |. |+++.+.|||++++.+.+.+ .+++||||+|.+.+..+ ++.+.+.+.++|+|+
T Consensus 2 ~livVsnrlPv~~~r~~~~-G~~~~~~~~~~ggL~~al~~l~~~--~~~~WvGw~g~~~~~~~~~~~~v~~~~~~~~~~~ 78 (474)
T PF00982_consen 2 RLIVVSNRLPVSVKRDPDD-GSWGWSWKPSAGGLVSALDPLLKK--RGGIWVGWPGVDVDEEEDEQDRVEPRLLDEYNCV 78 (474)
T ss_dssp --------------------------GGGGS-HHHHHHHHHHHH--H-EEEEEEEEEES-TTS---EEEE---ETTEEEE
T ss_pred Ccccccccccccccccccc-cccccccccCCCcHHHHHHHHHhc--CCCEEEEeCCCcCccccccccchhhhcccCceEE
Confidence 7999999999999988733 45 88889999999999775554 69999999998776544 556777788999999
Q ss_pred EEeCChHhhhhHhhhhhccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchH
Q 044635 137 PTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLP 216 (831)
Q Consensus 137 pv~l~~~~~~~~y~gf~~~~lWp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp 216 (831)
||||+++++++||+||||++|||+|||.++..|.. ..|+.+.|++|++||++||++|++.+++ +|+|||||||||+||
T Consensus 79 pV~l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~~~-~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~D~VWVhDYhL~llP 156 (474)
T PF00982_consen 79 PVFLSPEEYDGYYNGFCNQVLWPLFHYRLDSRPDL-ARFEEEWWEAYKRVNRRFADAIAEVYRP-GDLVWVHDYHLMLLP 156 (474)
T ss_dssp EEEE-HHHHHHHTTTHHHHTHHHHHTT-GG----G-----HHHHHHHHHHHHHHHHHHGGG--T-T-EEEEESGGGTTHH
T ss_pred EEEcCHHHHHHHHHhhhhhccCccccccccccccc-chhhHHHHHHHHHHHHHHHHHHHHhCcC-CCEEEEeCCcHHHHH
Confidence 99999999999999999999999999987622322 6899999999999999999999999996 599999999999999
Q ss_pred HHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEc
Q 044635 217 TFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYY 296 (831)
Q Consensus 217 ~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~ 296 (831)
++||+++|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||+|++|+++...+| ++.++
T Consensus 157 ~~LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~--~v~~~ 234 (474)
T PF00982_consen 157 QMLRERGPDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRG--TVEYN 234 (474)
T ss_dssp HHHHHTT--SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE---EEET
T ss_pred HHHHhhcCCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCc--eEEEC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999887765 69999
Q ss_pred CEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCC-cEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcE
Q 044635 297 GRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQG-KVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKV 375 (831)
Q Consensus 297 gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~-~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~v 375 (831)
||.++|.++|+|||++.|...+.++++.+..+++++++ ++ +++|++|||+|++|||+++|+||++||++||+++|||
T Consensus 235 Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~--~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv 312 (474)
T PF00982_consen 235 GRRVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKF--KGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKV 312 (474)
T ss_dssp TEEEEEEE------HHHHHHHHH-S---HHHHHHHHHT--TT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTE
T ss_pred CEEEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhc--CCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcE
Confidence 99999999999999999999999999999999999999 77 5999999999999999999999999999999999999
Q ss_pred EEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCC-------
Q 044635 376 VLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGS------- 448 (831)
Q Consensus 376 vLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGm------- 448 (831)
+|+||+.|+|++.++|++++++++++|++||++||+.+|+||+|+.+.++++++.|+|++||||++||+||||
T Consensus 313 ~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Ey 392 (474)
T PF00982_consen 313 VLIQIAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEY 392 (474)
T ss_dssp EEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHH
T ss_pred EEEEEeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -CCCCCCCceEEEecccccccccC-CCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHH
Q 044635 449 -EPSSPKKSMLVVSEFIGCSPSLS-GAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDL 526 (831)
Q Consensus 449 -a~~~~~~g~lVlSe~~G~~~~l~-~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 526 (831)
+|+.+++|+||+|||+||+++|. +|++|||||++++|+||++||+||++||+.|+++++++|.+||+.+|+++||++|
T Consensus 393 va~q~~~~GvLiLSefaGaa~~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L 472 (474)
T PF00982_consen 393 VACQDDNPGVLILSEFAGAAEQLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDL 472 (474)
T ss_dssp HHHS-TS--EEEEETTBGGGGT-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHH
T ss_pred EEEecCCCCceEeeccCCHHHHcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHh
Confidence 45667899999999999999997 6699999999999999999999999999999999999999999999999999999
Q ss_pred HH
Q 044635 527 ER 528 (831)
Q Consensus 527 ~~ 528 (831)
++
T Consensus 473 ~~ 474 (474)
T PF00982_consen 473 KR 474 (474)
T ss_dssp HT
T ss_pred hC
Confidence 74
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-111 Score=935.09 Aligned_cols=459 Identities=40% Similarity=0.702 Sum_probs=423.8
Q ss_pred CCCCCCcEEEEEcCCccceeecCCCCCCeEEeeCCCchHHHhhhccCCCCCCeEEEeccCCcCCcchhhhHhHhhccCee
Q 044635 55 SSVQRDRIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVNEQDEVSQILLDTFK 134 (831)
Q Consensus 55 ~~~~~~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~wvG~~~~~~~~~~~~~~~~~~~~~~~ 134 (831)
+.....|+|+||||+|+...+..++ +...+..++|||+++|++.+.. .+++|+||+|...+..+..........++.
T Consensus 10 ~~~~~~r~ivvsnR~p~~~~~~~~~-~~~~~~~s~ggL~~~l~~~~~~--~~~~W~gw~G~~~~~~~~~~~~~~~~~~~~ 86 (486)
T COG0380 10 SPLEDSRLIVVSNRLPVKKTPEGDK-GIEFGKRSAGGLVTALKPLLRV--DGGTWIGWSGTTGPTDESSDDLKERIGEFT 86 (486)
T ss_pred CcccCCcEEEEEccCCCcccccCCC-cceeeccCCcchhhhcchhhHh--hcceEEecCceeccccccchhhhhccccce
Confidence 4567889999999999998765555 6788899999999999875554 699999999976542232223333345899
Q ss_pred EEEEeCChHhhhhHhhhhhccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccc
Q 044635 135 CVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMV 214 (831)
Q Consensus 135 ~~pv~l~~~~~~~~y~gf~~~~lWp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~l 214 (831)
..||+++.+++++||+||||++|||+|||+++. ..|++.+|++|++||++||++|++.+++ +|+||||||||+|
T Consensus 87 ~~~v~l~~~~~~~~Y~~fsn~iLWP~~Hy~~~~-----~~~~~~~w~~Y~~vN~~FAd~i~~~~~~-gDiIWVhDYhL~L 160 (486)
T COG0380 87 SAPVILSDEDYEGYYNGFSNAILWPLFHYFIDD-----VAYERNWWDAYVKVNRKFADKIVEIYEP-GDIIWVHDYHLLL 160 (486)
T ss_pred EEEEecCHHHHHHHHHHhhHhhhcceeeeecCc-----cccchHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEEechhhh
Confidence 999999999999999999999999999999875 5899999999999999999999999997 5999999999999
Q ss_pred hHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEE
Q 044635 215 LPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLE 294 (831)
Q Consensus 215 lp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~ 294 (831)
||+|||++.|+++||||||||||++|+|+|||+|+||++|||+||+|||||++|++||+++|+|+++... ...+.
T Consensus 161 ~P~mlR~~~~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~-----~~~~~ 235 (486)
T COG0380 161 VPQMLRERIPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTG-----DADIR 235 (486)
T ss_pred hHHHHHHhCCCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhccccc-----ccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999998652 11233
Q ss_pred ---EcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCC-cEEEEeccCcccccCHHHHHHHHHHHHHhCCC
Q 044635 295 ---YYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQG-KVMLLGVDDMDIFKGISLKLLAMEQLLIQHPE 370 (831)
Q Consensus 295 ---~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~-~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~ 370 (831)
++|+.+++.++|+|||+..|.....++.++.++.++++.+ .+ +++|++|||+||+||++.+++||++||++||+
T Consensus 236 ~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~--~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe 313 (486)
T COG0380 236 FNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAEL--GRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPE 313 (486)
T ss_pred ccccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHh--cCCceEEEEehhcccccCcHHHHHHHHHHHHhChh
Confidence 4489999999999999999999999999988999999999 55 99999999999999999999999999999999
Q ss_pred CCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCC--
Q 044635 371 WQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGS-- 448 (831)
Q Consensus 371 ~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGm-- 448 (831)
|+|||+|+||+.|+|++.++|+.++.+++++|++||++||+.+|+||+|++++++++++.+||++||++++||+||||
T Consensus 314 ~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNL 393 (486)
T COG0380 314 WRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNL 393 (486)
T ss_pred hhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ------CCCCCCCceEEEecccccccccCCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHH
Q 044635 449 ------EPSSPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSF 522 (831)
Q Consensus 449 ------a~~~~~~g~lVlSe~~G~~~~l~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~ 522 (831)
+|+.+++|+||+|||+||+.+|.+|++|||||.+++|+||++||+|+.+||++|++++++.|.+||+++|+++|
T Consensus 394 vakEyVa~q~~~~G~LiLSeFaGaa~~L~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d~~~W~~~f 473 (486)
T COG0380 394 VAKEYVAAQRDKPGVLILSEFAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSF 473 (486)
T ss_pred HHHHHHHhhcCCCCcEEEeccccchhhhccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 45668899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 044635 523 LQDLERT 529 (831)
Q Consensus 523 l~~l~~~ 529 (831)
+.+|.++
T Consensus 474 l~~la~~ 480 (486)
T COG0380 474 LDDLAQA 480 (486)
T ss_pred HHHHHhc
Confidence 9999873
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-103 Score=896.60 Aligned_cols=446 Identities=39% Similarity=0.719 Sum_probs=413.1
Q ss_pred cEEEEEcCCccceeecCCCCCCeEEeeCCCchHHHhhhccCCCCCCeEEEeccCCcCCcc-hhhhHhHhhccCeeEEEEe
Q 044635 61 RIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVN-EQDEVSQILLDTFKCVPTF 139 (831)
Q Consensus 61 r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~wvG~~~~~~~~~-~~~~~~~~~~~~~~~~pv~ 139 (831)
||||||||+|+.+.++ + ++++.|||+++|.+.+.+ .+++||||+|...+++ ++.++...+..+|+|+|||
T Consensus 1 ~livvsnr~p~~~~~~----~---~~~~~gGl~~al~~~~~~--~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~v~ 71 (456)
T TIGR02400 1 RLIVVSNRLPVPITRG----G---LEPSAGGLAVALLGALKA--TGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVF 71 (456)
T ss_pred CEEEEECCCCccccCC----C---CCcCCCCHHHHHHHHHhc--cCcEEEEeCCCCCCccchhhhHHHhhccCceEEEEE
Confidence 6999999999987653 2 566789999999987765 5999999999765532 3344555567889999999
Q ss_pred CChHhhhhHhhhhhccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHH
Q 044635 140 LPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFL 219 (831)
Q Consensus 140 l~~~~~~~~y~gf~~~~lWp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~l 219 (831)
|++++++.||+||||++|||+|||+++. ..|+++.|++|++||++||++|++++++ +|+|||||||||+||.+|
T Consensus 72 l~~~~~~~~y~gf~n~~lWPl~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~i~~~~~~-~d~vwvhDYhl~l~p~~l 145 (456)
T TIGR02400 72 LSEEDVDGYYNGFSNSTLWPLFHYRPDL-----IRYDRKAWEAYRRVNRLFAEALAPLLQP-GDIVWVHDYHLMLLPAML 145 (456)
T ss_pred CCHHHHHHHHHHhhhhhcchhhcccccc-----cccCHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEecchhhHHHHHH
Confidence 9999999999999999999999999654 5899999999999999999999999987 599999999999999999
Q ss_pred HhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEE
Q 044635 220 RKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRT 299 (831)
Q Consensus 220 r~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~ 299 (831)
|++.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||+|++|++.... ++.+.|+.
T Consensus 146 r~~~~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~----~~~~~g~~ 221 (456)
T TIGR02400 146 RELGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPN----GVESGGRT 221 (456)
T ss_pred HhhCCCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCC----ceEECCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999876532 46788999
Q ss_pred EEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 044635 300 VSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQ 379 (831)
Q Consensus 300 ~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvq 379 (831)
++|.++|+|||++.|.+....+.+.+..+++|+++ .++++|++|||+++.||++.+|+||++|++++|+++++++|+|
T Consensus 222 ~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~ 299 (456)
T TIGR02400 222 VRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESL--KGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQ 299 (456)
T ss_pred EEEEEecCcCCHHHHHHHhcChhHHHHHHHHHHHc--CCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEE
Confidence 99999999999999998887777778888899999 7999999999999999999999999999999999999999999
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCC--------CCC
Q 044635 380 IANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGS--------EPS 451 (831)
Q Consensus 380 ig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGm--------a~~ 451 (831)
|+.|+|+++++|+++++++++++++||++||..+|.|++++.+.++++|+.++|++|||||+||++||| ||.
T Consensus 300 v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g 379 (456)
T TIGR02400 300 IAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQ 379 (456)
T ss_pred EecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 455
Q ss_pred CCCCceEEEecccccccccCCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHH
Q 044635 452 SPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLE 527 (831)
Q Consensus 452 ~~~~g~lVlSe~~G~~~~l~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 527 (831)
.+..|++|+|+++|+++++.+|++|||+|++++|+||.++|+|+.+||+.|+++++++|.+||+.+|+++|+.+|.
T Consensus 380 ~P~~g~vVlS~~~G~~~~l~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 380 DPKDGVLILSEFAGAAQELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDLN 455 (456)
T ss_pred CCCCceEEEeCCCCChHHhCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 5556889999999999999999999999999999999999999999999999999999999999999999999874
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-94 Score=825.94 Aligned_cols=451 Identities=46% Similarity=0.790 Sum_probs=416.1
Q ss_pred cEEEEEcCCccceeecCCCCCCeEEeeCCCchHHHhhhccCCCCCCeEEEeccCCcCCcchhhhHhHhhccCeeEEEEeC
Q 044635 61 RIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVNEQDEVSQILLDTFKCVPTFL 140 (831)
Q Consensus 61 r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~wvG~~~~~~~~~~~~~~~~~~~~~~~~~pv~l 140 (831)
|+||||||+|+.+.++++ |.|+++++.|||+.+|.+.+.+ .+++||||++.+.+..+...+.+....+|+|+|||+
T Consensus 1 ~li~vsnr~p~~~~~~~~--~~~~~~~~~ggl~~~l~~~~~~--~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~~v~l 76 (460)
T cd03788 1 RLVVVSNRLPVSIERDGD--GEFEARRSAGGLATALKGLLKR--TGGLWVGWSGIEEDEEEEDEVSTELLGEYTVAPVFL 76 (460)
T ss_pred CEEEEECCCCceeEEcCC--CceEeccCCCcHHHHHHHHHhc--CCeEEEEeCCCCCCcccchhhhhhhcCCceEEEeeC
Confidence 689999999999998765 5899999999999999876554 699999999987665444345556678999999999
Q ss_pred ChHhhhhHhhhhhccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHHH
Q 044635 141 PPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLR 220 (831)
Q Consensus 141 ~~~~~~~~y~gf~~~~lWp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr 220 (831)
++++++.||+||||++|||+|||+.+. .+|++++|++|++||++||++|++.+++ +|+||||||||+++|.+||
T Consensus 77 ~~~~~~~~y~~f~~~~LWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fa~~i~~~~~~-~d~iwihDyhl~llp~~lr 150 (460)
T cd03788 77 SPEEFEGYYNGFSNEVLWPLFHYRLDL-----ARFDREDWEAYVRVNRKFADAIAEVLRP-GDLVWVHDYHLLLLPQMLR 150 (460)
T ss_pred CHHHHHHHHHHhhhhhcchhhcCCCCc-----cccCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeChhhhHHHHHHH
Confidence 999999999999999999999999876 5899999999999999999999999997 5999999999999999999
Q ss_pred hhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEE
Q 044635 221 KRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTV 300 (831)
Q Consensus 221 ~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~ 300 (831)
++.++++||||||||||++|+|+++|+|++|+++||+||+|||||++|++||+++|+++++++.... ..+.++|+.+
T Consensus 151 ~~~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~---~~i~~~g~~~ 227 (460)
T cd03788 151 ERGPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDD---GGVEYGGRRV 227 (460)
T ss_pred hhCCCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCC---ceEEECCEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999886542 3688999999
Q ss_pred EEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEE
Q 044635 301 SIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQI 380 (831)
Q Consensus 301 ~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqi 380 (831)
+|.++|+|||++.|......+......++++..+ +++++|++|||+++.||+..+|+||+++++++|+++++++|+||
T Consensus 228 ~i~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~--~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~v 305 (460)
T cd03788 228 RVGAFPIGIDPDAFRKLAASPEVQERAAELRERL--GGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQI 305 (460)
T ss_pred EEEEEeCeEcHHHHHHHhcCchhHHHHHHHHHhc--CCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEE
Confidence 9999999999999988766666655556666666 78999999999999999999999999999999999999999999
Q ss_pred ecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCC--------CCCC
Q 044635 381 ANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGS--------EPSS 452 (831)
Q Consensus 381 g~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGm--------a~~~ 452 (831)
|.|+|+++++++++++++++++++||.+||..+|.||+++.+.++.+++.++|++|||||+||++||| +|..
T Consensus 306 g~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~ 385 (460)
T cd03788 306 AVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQD 385 (460)
T ss_pred ccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEec
Confidence 99999999999999999999999999999998999999999999999999999999999999999999 3333
Q ss_pred CCCceEEEecccccccccCCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHH
Q 044635 453 PKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDL 526 (831)
Q Consensus 453 ~~~g~lVlSe~~G~~~~l~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 526 (831)
+++|++|+|+++|+++++.+|++|||+|++++|++|.++|+|+++|++.+++++++++.++++..|+++|+++|
T Consensus 386 p~~g~vV~S~~~G~~~~~~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l 459 (460)
T cd03788 386 DDPGVLILSEFAGAAEELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDL 459 (460)
T ss_pred CCCceEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence 45677999999999999889999999999999999999999999999999999999999999999999999987
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-35 Score=303.97 Aligned_cols=248 Identities=29% Similarity=0.450 Sum_probs=214.0
Q ss_pred CHHHHHHHHHhcCceeEEecCCCccCCCCC--CCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEE
Q 044635 560 SMEHIVSAYKRTTTRAILLDYDGTLMPQAS--IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIA 637 (831)
Q Consensus 560 ~~~~~~~~y~~s~~rli~~D~DGTLl~~~~--~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~li 637 (831)
....+.+.|..+++++||+||||||++... ....|+++++++|++|+++++|.|+|+|||+...++.|++ +++++++
T Consensus 5 ~~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~-v~~i~l~ 83 (266)
T COG1877 5 QSNQLLEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG-VPGIGLI 83 (266)
T ss_pred hhhhhccccccccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC-CCCccEE
Confidence 445677889999999999999999998543 3456899999999999999999999999999999999998 8899999
Q ss_pred ecCCEEEEeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHh
Q 044635 638 AEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVL 717 (831)
Q Consensus 638 aenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l 717 (831)
|+||++++..++.-|+......+..|++.+..++++|.+++||+++|.|++++.|||++++++....++........
T Consensus 84 aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~--- 160 (266)
T COG1877 84 AEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLI--- 160 (266)
T ss_pred EecceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhcc---
Confidence 99999999888888887776777889999999999999999999999999999999999987765433333222222
Q ss_pred cCCC-eEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEE
Q 044635 718 ANEP-VTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACT 796 (831)
Q Consensus 718 ~~~~-v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~ 796 (831)
+.. +.++.|+..||++|.++|||.+++++++.. ....++++|.|||.+||+||++++.+. .+++.
T Consensus 161 -~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~---~~~~~~~~~aGDD~TDE~~F~~v~~~~----------~~~v~ 226 (266)
T COG1877 161 -NELKLRVTPGKMVVELRPPGVSKGAAIKYIMDEL---PFDGRFPIFAGDDLTDEDAFAAVNKLD----------SITVK 226 (266)
T ss_pred -ccccEEEEeCceEEEEeeCCcchHHHHHHHHhcC---CCCCCcceecCCCCccHHHHHhhccCC----------CceEE
Confidence 222 889999999999999999999999999986 444468999999999999999998642 26899
Q ss_pred eCCCCcccceEeCChhHHHHHHHHHHhhh
Q 044635 797 VGRKPSKAKYYLDDTVEIVRLMQGLACVA 825 (831)
Q Consensus 797 vG~~~s~A~y~l~d~~eV~~~L~~L~~~~ 825 (831)
+|.+.+.|++.+.++......|.++....
T Consensus 227 v~~~~t~a~~~~~~~~~~~~~l~~~~~~~ 255 (266)
T COG1877 227 VGVGSTQAKFRLAGVYGFLRSLYKLLEAL 255 (266)
T ss_pred ecCCcccccccccccHHHHHHHHHHHHHh
Confidence 99999999999999999999998887654
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=310.36 Aligned_cols=227 Identities=40% Similarity=0.655 Sum_probs=154.1
Q ss_pred EecCCCccCCCCC--CCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCceEEE
Q 044635 577 LLDYDGTLMPQAS--IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWET 654 (831)
Q Consensus 577 ~~D~DGTLl~~~~--~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~w~~ 654 (831)
|+||||||.+..+ ....++++++++|++|+++++|.|+|+|||+...+ +.+..+++++++|+||++++.+++..|..
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~-~~~~~~~~i~l~gehG~e~~~~~~~~~~~ 79 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDL-ERFGGIPNIGLAGEHGAEIRRPGGSEWTN 79 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHH-HHH-S-SS-EEEEGGGTEEEETTE-EEE-
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHh-HHhcCCCCceEEEEeeEEeccCccccccc
Confidence 7999999999654 34578899999999999999999999999999994 45556789999999999999998888886
Q ss_pred cCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCC-CeEEEEcCeEEEE
Q 044635 655 CIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANE-PVTVKSGQNLVEV 733 (831)
Q Consensus 655 ~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~-~v~v~~g~~~vEV 733 (831)
.....+..|++.+.++++++.++++|+++|.|+++++|||++++++++..++.++.+++.+.+... ++.+..|+.+|||
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEv 159 (235)
T PF02358_consen 80 LPADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEV 159 (235)
T ss_dssp TTGGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEE
T ss_pred cccccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEE
Confidence 555556789999999999999999999999999999999999999999889999999999977664 8999999999999
Q ss_pred EeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeC-----CCCcccceEe
Q 044635 734 KPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVG-----RKPSKAKYYL 808 (831)
Q Consensus 734 ~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG-----~~~s~A~y~l 808 (831)
+|.+++||.|+++|++.+...+..+++++|+|||.+||+||++++... ...+++.|| .++|.|+|+|
T Consensus 160 rp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~--------~~~~~i~V~~~~~~~~~t~A~y~l 231 (235)
T PF02358_consen 160 RPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELE--------EGGFGIKVGSVSVGEKPTAASYRL 231 (235)
T ss_dssp E-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS------------EEEEES---------------
T ss_pred EeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcc--------cCCCCeEEEeeccccccccccccc
Confidence 999999999999999987333344789999999999999999998631 112455555 4679999999
Q ss_pred CChh
Q 044635 809 DDTV 812 (831)
Q Consensus 809 ~d~~ 812 (831)
+|+.
T Consensus 232 ~~p~ 235 (235)
T PF02358_consen 232 DDPS 235 (235)
T ss_dssp ----
T ss_pred ccCC
Confidence 9863
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-32 Score=322.56 Aligned_cols=536 Identities=15% Similarity=0.143 Sum_probs=321.2
Q ss_pred CEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhh-----------------cCCChHHH-HHHHhcCCeEeec
Q 044635 203 DFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYK-----------------TLPIREEI-LRALLNSDLIGFH 264 (831)
Q Consensus 203 d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~-----------------~lp~r~ei-l~~ll~~dligf~ 264 (831)
|+|.-|+++--.+...|++++ ++|..++.|+- ..+-++ .++.|-+. -..+-.||.|.-.
T Consensus 312 DvIHaHyw~sG~aa~~L~~~l-gVP~V~T~HSL--gr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIas 388 (1050)
T TIGR02468 312 YVIHGHYADAGDSAALLSGAL-NVPMVLTGHSL--GRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITS 388 (1050)
T ss_pred CEEEECcchHHHHHHHHHHhh-CCCEEEECccc--hhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEe
Confidence 899999888888888887766 68999999963 111111 11222121 3346678999888
Q ss_pred CHHhHHHHHHHH-------HHHhCCeecccCceeeEEEcCE-EEEEEEeecccChHHHHHhhCCcch-------------
Q 044635 265 TFDYARHFLSCC-------SRMLGLTYESKRGYIGLEYYGR-TVSIKILPVGIHMGQLQSVLSLPGT------------- 323 (831)
Q Consensus 265 t~~~~~~Fl~~~-------~r~l~~~~~~~~~~~~~~~~gr-~~~i~v~P~GId~~~~~~~~~~~~~------------- 323 (831)
|......-...- .|.|.. ...+ ++.++|+ .-++.|+|+|||+++|.+.......
T Consensus 389 T~qE~~eq~~lY~~~~~~~~~~~~~--~~~~---gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~ 463 (1050)
T TIGR02468 389 TRQEIEEQWGLYDGFDVILERKLRA--RARR---GVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPD 463 (1050)
T ss_pred CHHHHHHHHHHhccCCchhhhhhhh--hhcc---cccccccCCCCeEEeCCCCcHHHccCCCccccchhccccccccccc
Confidence 876665432110 011111 0111 2333333 2388999999999999753211100
Q ss_pred HHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhH----HHHHHHHH
Q 044635 324 EAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDV----KEVQAETY 399 (831)
Q Consensus 324 ~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~----~~l~~~i~ 399 (831)
.....+++..+..+++++||+|||+++.||+..+|+||..+.+..+.. ++.+ ++|... ..... ..+..++.
T Consensus 464 ~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~--nL~L-IiG~gd--d~d~l~~~~~~~l~~L~ 538 (1050)
T TIGR02468 464 PPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRD--DIDEMSSGSSSVLTSVL 538 (1050)
T ss_pred chhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCC--CEEE-EEecCc--hhhhhhccchHHHHHHH
Confidence 011223444333567899999999999999999999999986543321 2333 456321 11110 12334555
Q ss_pred HHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHc----CEeEECCCccCCC---CCCCC-CceEEEeccccccccc-
Q 044635 400 STVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVA----ECCLVTAVRDGSE---PSSPK-KSMLVVSEFIGCSPSL- 470 (831)
Q Consensus 400 ~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~A----Dv~vvtS~~eGma---~~~~~-~g~lVlSe~~G~~~~l- 470 (831)
.++.+.+ ....+.|.++++++++.++|+.| |+||+||++|||. .+++. +.|+|+|...|..+.+
T Consensus 539 ~li~~lg-------L~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~ 611 (1050)
T TIGR02468 539 KLIDKYD-------LYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHR 611 (1050)
T ss_pred HHHHHhC-------CCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhc
Confidence 5555532 22345567889999999999998 6999999999982 13333 4578888887777766
Q ss_pred --CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhhh-cccc-----c--
Q 044635 471 --SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCREHVR-QRCW-----G-- 540 (831)
Q Consensus 471 --~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~~-~~~~-----~-- 540 (831)
.+|++|+|.|++++|++|.++|+. ++.++...+..++.+.++++...++++++.+......+.. ++.. .
T Consensus 612 ~g~nGlLVdP~D~eaLA~AL~~LL~D-pelr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~~~~~~~~~~~~~~~~~~~ 690 (1050)
T TIGR02468 612 VLDNGLLVDPHDQQAIADALLKLVAD-KQLWAECRQNGLKNIHLFSWPEHCKTYLSRIASCRPRHPQWQRDTDDGEEASE 690 (1050)
T ss_pred cCCcEEEECCCCHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccCccccccccccccccc
Confidence 479999999999999999999974 4445555566777888899999999999888776544311 0000 0
Q ss_pred ---cC--------cCcceeEeecCccccc----------CCH----HHHHHH-----------------------HH--h
Q 044635 541 ---IG--------FGLSFRVVALDPNFKK----------LSM----EHIVSA-----------------------YK--R 570 (831)
Q Consensus 541 ---~~--------~g~~~~~~~~~~~f~~----------l~~----~~~~~~-----------------------y~--~ 570 (831)
.+ ..|++.+ |-.... ++. ..+..+ |. +
T Consensus 691 ~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 767 (1050)
T TIGR02468 691 DESPGDSLRDIQDISLNLSV---DGDKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPKGSSAKAQQGSGAGKYPALR 767 (1050)
T ss_pred ccCccccccccccchhhccc---cccccccccccccccccchhhHHHHHHHHHhhccccccccccccccccccccCcccc
Confidence 01 0111110 000000 000 011111 11 1
Q ss_pred cCceeEE--ecCCCccCCCCCCCCCCCHHHHHHHHHHhh---cCCCeEEEECCCCHhhHHHHhCC--CC---CceEEecC
Q 044635 571 TTTRAIL--LDYDGTLMPQASIDKSPNSKTIDILNSLCR---DKNNMVFLVSAKSRKTLAEWFSP--CE---NLGIAAEH 640 (831)
Q Consensus 571 s~~rli~--~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~---d~g~~V~I~SGR~~~~l~~~~~~--~~---~~~liaen 640 (831)
..+++|+ +|+|+| +. ..+.+.++++.+.+ .....++++|||+...+...+.. ++ ...+||.-
T Consensus 768 ~~~~~~via~D~d~~-~~-------~~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~~~PD~lI~~v 839 (1050)
T TIGR02468 768 RRKRLFVIAVDCYDD-KD-------LLQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLNPTDFDALICNS 839 (1050)
T ss_pred ccceEEEEEeccCCC-CC-------hHHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCC
Confidence 1256666 999999 32 12333344444432 23467899999999999998854 33 56899999
Q ss_pred CEEEEeCC-----CceEEEc---CCcCCccHH-HHHHHHHHHHhcc--------CCCeeEeeccce--EEEeeccCCCcc
Q 044635 641 GYFFRLRR-----DEEWETC---IPVADCGWK-QIAEPVMKLYTET--------TDGSTIEDKETA--LVWSYEDADPDF 701 (831)
Q Consensus 641 Ga~i~~~~-----~~~w~~~---~~~~~~~w~-~~v~~il~~~~e~--------~~gs~ie~k~~~--l~~~~~~~d~~~ 701 (831)
|+.|+++. +..|..- ....+..|. +.+...+..+... .++...+..+.. ....|.-.|++.
T Consensus 840 GTeIyy~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~~q~~~k~SY~v~d~~~ 919 (1050)
T TIGR02468 840 GSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEEDEESSTDHCYAFKVKDPSK 919 (1050)
T ss_pred CcceeccCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhhcccccccccccceecChhhCCCceEEEEecCccc
Confidence 99999862 1222210 011235673 3455555444331 122233322211 222232113321
Q ss_pred chHHHHHHHHHHHhHhcCCCeE-EEE-cCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEE-EcCCch-h-HHHHHH
Q 044635 702 GSCQAKELLDHLESVLANEPVT-VKS-GQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLC-VGDDRS-D-EDMFEV 776 (831)
Q Consensus 702 ~~~~a~el~~~L~~~l~~~~v~-v~~-g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla-~GD~~N-D-e~Mf~~ 776 (831)
. ...+++.+.|... ..... +++ +..+++|.|..+|||.|+++|..++ |++.+++++ +||+.| | ++|+.-
T Consensus 920 ~-~~v~elr~~Lr~~--gLr~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rw---gi~l~~v~VfaGdSGntD~e~Ll~G 993 (1050)
T TIGR02468 920 V-PPVKELRKLLRIQ--GLRCHAVYCRNGTRLNVIPLLASRSQALRYLFVRW---GIELANMAVFVGESGDTDYEGLLGG 993 (1050)
T ss_pred C-ccHHHHHHHHHhC--CCceEEEeecCCcEeeeeeCCCCHHHHHHHHHHHc---CCChHHeEEEeccCCCCCHHHHhCC
Confidence 1 1245555555542 22222 333 4599999999999999999999999 999999955 999999 9 556543
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-33 Score=302.81 Aligned_cols=242 Identities=24% Similarity=0.337 Sum_probs=195.5
Q ss_pred HHHhcCceeEEecCCCccCCCCC-CCC-CCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEE
Q 044635 567 AYKRTTTRAILLDYDGTLMPQAS-IDK-SPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFF 644 (831)
Q Consensus 567 ~y~~s~~rli~~D~DGTLl~~~~-~~~-~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i 644 (831)
++.+.+..+||+||||||+|..+ .+. .++++++++|++|++ +..|+|+|||++..+.++++ +.+++++++||+++
T Consensus 105 ~~~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~-l~~l~l~g~hGa~i 181 (366)
T PLN03017 105 EASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLAK--CFPTAIVTGRCIDKVYNFVK-LAELYYAGSHGMDI 181 (366)
T ss_pred HHhcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHhc--CCcEEEEeCCCHHHHHHhhc-ccCceEEEcCCcEE
Confidence 33456889999999999997554 233 799999999999984 78999999999999999965 46789999999999
Q ss_pred EeCCCceEEE-------cCCcCCccHHHHHHHH---HHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHH
Q 044635 645 RLRRDEEWET-------CIPVADCGWKQIAEPV---MKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLE 714 (831)
Q Consensus 645 ~~~~~~~w~~-------~~~~~~~~w~~~v~~i---l~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~ 714 (831)
+.+++. |.. ........|...+.++ ++.+++++||+++|.|.++++||||++++.. +.++..++.
T Consensus 182 ~~p~~~-~~~~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~----~~~l~~~~~ 256 (366)
T PLN03017 182 KGPAKG-FSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKK----WSELVLQVR 256 (366)
T ss_pred ecCCCc-ceeccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHH----HHHHHHHHH
Confidence 876542 221 1111234577766666 5556779999999999999999999997642 467777788
Q ss_pred hHhcCCC-eEEEEcCeEEEEEeC-CCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCce
Q 044635 715 SVLANEP-VTVKSGQNLVEVKPQ-GVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEV 792 (831)
Q Consensus 715 ~~l~~~~-v~v~~g~~~vEV~p~-gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~ 792 (831)
.++.+.+ +.+..|+..+||+|. ++|||.|+++|++.+...+...++++|+|||.+||+||+++... ...
T Consensus 257 ~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~---------~~G 327 (366)
T PLN03017 257 SVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDR---------GEG 327 (366)
T ss_pred HHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhc---------CCc
Confidence 8777765 789999999999995 99999999999998732223356899999999999999999642 124
Q ss_pred EEEEeC--CCCcccceEeCChhHHHHHHHHHHhhh
Q 044635 793 FACTVG--RKPSKAKYYLDDTVEIVRLMQGLACVA 825 (831)
Q Consensus 793 ~~v~vG--~~~s~A~y~l~d~~eV~~~L~~L~~~~ 825 (831)
++|.|| .++|.|+|+|+++++|..+|+.|+.-.
T Consensus 328 ~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~~~ 362 (366)
T PLN03017 328 FGILVSKFPKDTDASYSLQDPSEVMDFLARLVEWK 362 (366)
T ss_pred eEEEECCCCCCCcceEeCCCHHHHHHHHHHHHHHH
Confidence 899999 578999999999999999999998753
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=301.70 Aligned_cols=240 Identities=21% Similarity=0.349 Sum_probs=196.0
Q ss_pred HhcCceeEEecCCCccCCCCC--CCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEe
Q 044635 569 KRTTTRAILLDYDGTLMPQAS--IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRL 646 (831)
Q Consensus 569 ~~s~~rli~~D~DGTLl~~~~--~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~ 646 (831)
.+.++++||+||||||+|..+ ....++++++++|++|++ +..|+|+|||++..+.++++ ++.++++++||++++.
T Consensus 94 ~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~-~~~l~laGsHG~e~~~ 170 (354)
T PLN02151 94 SEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAK--CFPTAIVSGRCREKVSSFVK-LTELYYAGSHGMDIKG 170 (354)
T ss_pred hcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhc--CCCEEEEECCCHHHHHHHcC-CccceEEEeCCceeec
Confidence 456789999999999998543 334789999999999986 56899999999999999997 5679999999999987
Q ss_pred CC-CceEEE----cCCcCCccHHHHHHHHHHHHh---ccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhc
Q 044635 647 RR-DEEWET----CIPVADCGWKQIAEPVMKLYT---ETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLA 718 (831)
Q Consensus 647 ~~-~~~w~~----~~~~~~~~w~~~v~~il~~~~---e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~ 718 (831)
++ +..|+. .....+..|...+.++++.+. +++||+++|.|.++++||||+++++ +..++..++++++.
T Consensus 171 p~~g~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~----~~~~l~~~l~~v~~ 246 (354)
T PLN02151 171 PEQGSKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEEN----KWSDLANQVRSVLK 246 (354)
T ss_pred CCCCccccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChH----HHHHHHHHHHHHHh
Confidence 64 335531 111234578887887776654 6899999999999999999999765 23567777888777
Q ss_pred CCC-eEEEEcCeEEEEEeC-CCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEE
Q 044635 719 NEP-VTVKSGQNLVEVKPQ-GVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACT 796 (831)
Q Consensus 719 ~~~-v~v~~g~~~vEV~p~-gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~ 796 (831)
+.+ +.+..|+..+||+|. ++|||.|+++|++.+...+...++++|+|||.+||+||+++.... ..+++.
T Consensus 247 ~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~---------~G~gI~ 317 (354)
T PLN02151 247 NYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKK---------QGLGIL 317 (354)
T ss_pred hCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcC---------CCccEE
Confidence 766 789999999999995 999999999999987333334568999999999999999986421 126777
Q ss_pred eC--CCCcccceEeCChhHHHHHHHHHHhh
Q 044635 797 VG--RKPSKAKYYLDDTVEIVRLMQGLACV 824 (831)
Q Consensus 797 vG--~~~s~A~y~l~d~~eV~~~L~~L~~~ 824 (831)
|| .++|.|+|+|+++++|..+|+.|+.-
T Consensus 318 Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~~ 347 (354)
T PLN02151 318 VSKYAKETNASYSLQEPDEVMEFLERLVEW 347 (354)
T ss_pred eccCCCCCcceEeCCCHHHHHHHHHHHHHh
Confidence 87 68999999999999999999999874
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-33 Score=295.17 Aligned_cols=237 Identities=28% Similarity=0.400 Sum_probs=196.7
Q ss_pred cCceeEEecCCCccCCCCC--CCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCC
Q 044635 571 TTTRAILLDYDGTLMPQAS--IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRR 648 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~--~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~ 648 (831)
+++++|++||||||++..+ ....+++++.++|++|++++++.|+|+|||+...+...+ .+++++++++||++++.++
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~-~~~~~~l~g~hG~~~~~~g 79 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGV-KLPGLGLAGEHGCEMKDNG 79 (244)
T ss_pred CCcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccC-CCCceeEEeecCEEEecCC
Confidence 5789999999999998532 345678999999999999999999999999988877655 3477899999999998633
Q ss_pred Cc-eEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccC-CCccchHHHHHHHHHHHhHhcCCCeEEEE
Q 044635 649 DE-EWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDA-DPDFGSCQAKELLDHLESVLANEPVTVKS 726 (831)
Q Consensus 649 ~~-~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~-d~~~~~~~a~el~~~L~~~l~~~~v~v~~ 726 (831)
.. .|.... .....|++.+.++++++.++ ||+++|.|+.+++|||+.+ |++++..++.++..++. ...++.+..
T Consensus 80 ~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~-pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~~---~~~~~~v~~ 154 (244)
T TIGR00685 80 SCQDWVNLT-EKIPSWKVRANELREEITTR-PGVFIERKGVALAWHYRQAPVPELARFRAKELKEKIL---SFTDLEVMD 154 (244)
T ss_pred Ccceeeech-hhhhhHHHHHHHHHHHHhcC-CCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHHh---cCCCEEEEE
Confidence 22 454322 22247888899999988887 9999999999999999998 78887777777776654 334688899
Q ss_pred cCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEe--CCCCccc
Q 044635 727 GQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTV--GRKPSKA 804 (831)
Q Consensus 727 g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~v--G~~~s~A 804 (831)
|+.++|++|.++|||.+++++++.+ +..++++++|||+.||++||+.+.... .....++++| |.+++.|
T Consensus 155 g~~~~e~~p~~~~Kg~a~~~~~~~~---~~~~~~~i~iGD~~~D~~~~~~~~~~~------~~~g~~~v~v~~g~~~~~A 225 (244)
T TIGR00685 155 GKAVVELKPRFVNKGEIVKRLLWHQ---PGSGISPVYLGDDITDEDAFRVVNNQW------GNYGFYPVPIGSGSKKTVA 225 (244)
T ss_pred CCeEEEEeeCCCCHHHHHHHHHHhc---ccCCCceEEEcCCCcHHHHHHHHhccc------CCCCeEEEEEecCCcCCCc
Confidence 9999999999999999999999998 788899999999999999999993210 1112478888 8889999
Q ss_pred ceEeCChhHHHHHHHHHH
Q 044635 805 KYYLDDTVEIVRLMQGLA 822 (831)
Q Consensus 805 ~y~l~d~~eV~~~L~~L~ 822 (831)
+|+++++++|..+|+.|+
T Consensus 226 ~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 226 KFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred eEeCCCHHHHHHHHHHHh
Confidence 999999999999999886
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-33 Score=296.85 Aligned_cols=234 Identities=19% Similarity=0.243 Sum_probs=189.7
Q ss_pred CceeEEecCCCccCCCCC--CCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCC
Q 044635 572 TTRAILLDYDGTLMPQAS--IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRD 649 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~--~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~ 649 (831)
+.++|++||||||++..+ ....++++++++|++|++++++.|+|+|||+...+.++++.+ .+.++++||++++..++
T Consensus 13 ~~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~ 91 (266)
T PRK10187 13 ANYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPY-RFPLAGVHGAERRDING 91 (266)
T ss_pred CCEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc-cceEEEeCCCeeecCCC
Confidence 368999999999998432 355789999999999988789999999999999999999865 46799999999987654
Q ss_pred ceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCe
Q 044635 650 EEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQN 729 (831)
Q Consensus 650 ~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~ 729 (831)
..+.. ..+.+|.+.+...++.+.++++|+++|.|+.+++|||+.++ +- .....++.+.+.+.+. .+.+.+|+.
T Consensus 92 ~~~~~---~l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~-~~-~~~~~~l~~~i~~~~~--~~~~~~g~~ 164 (266)
T PRK10187 92 KTHIV---HLPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAP-QH-EDALLALAQRITQIWP--QLALQPGKC 164 (266)
T ss_pred Ceeec---cCChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCC-cc-HHHHHHHHHHHHhhCC--ceEEeCCCE
Confidence 33322 23456666677777777888999999999999999998773 21 1122233333333222 366778999
Q ss_pred EEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCCcccceEeC
Q 044635 730 LVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLD 809 (831)
Q Consensus 730 ~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~s~A~y~l~ 809 (831)
++||+|+++|||.|++++++++ |+..+++++|||+.||++||+++... ..++|+||++.+.|+|+|+
T Consensus 165 ~lEi~p~g~~Kg~al~~ll~~~---~~~~~~v~~~GD~~nD~~mf~~~~~~----------~g~~vavg~a~~~A~~~l~ 231 (266)
T PRK10187 165 VVEIKPRGTNKGEAIAAFMQEA---PFAGRTPVFVGDDLTDEAGFAVVNRL----------GGISVKVGTGATQASWRLA 231 (266)
T ss_pred EEEeeCCCCCHHHHHHHHHHhc---CCCCCeEEEEcCCccHHHHHHHHHhc----------CCeEEEECCCCCcCeEeCC
Confidence 9999999999999999999998 88899999999999999999999532 1279999999999999999
Q ss_pred ChhHHHHHHHHHHhhhc
Q 044635 810 DTVEIVRLMQGLACVAD 826 (831)
Q Consensus 810 d~~eV~~~L~~L~~~~~ 826 (831)
++++|..+|+.|+....
T Consensus 232 ~~~~v~~~L~~l~~~~~ 248 (266)
T PRK10187 232 GVPDVWSWLEMITTAQQ 248 (266)
T ss_pred CHHHHHHHHHHHHHhhh
Confidence 99999999999997554
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-33 Score=304.41 Aligned_cols=241 Identities=23% Similarity=0.343 Sum_probs=190.7
Q ss_pred HHHHhcCceeEEecCCCccCCCCC--CCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEE
Q 044635 566 SAYKRTTTRAILLDYDGTLMPQAS--IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYF 643 (831)
Q Consensus 566 ~~y~~s~~rli~~D~DGTLl~~~~--~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~ 643 (831)
.+|.+++++++|+||||||.+... ....++++++++|++|+++ ..|+|+|||++..+.++++. +.++++++||++
T Consensus 112 ~~~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~--~~VAIVSGR~~~~L~~~l~~-~~l~laGsHG~e 188 (384)
T PLN02580 112 ANFAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY--FPTAIISGRSRDKVYELVGL-TELYYAGSHGMD 188 (384)
T ss_pred HHHhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHHhCC-CCccEEEeCCce
Confidence 478999999999999999998553 3456799999999999885 47999999999999999974 579999999999
Q ss_pred EEeCCC----ceEEEcC------------CcCCccHHHHHHHHHHH---HhccCCCeeEeeccceEEEeeccCCCccchH
Q 044635 644 FRLRRD----EEWETCI------------PVADCGWKQIAEPVMKL---YTETTDGSTIEDKETALVWSYEDADPDFGSC 704 (831)
Q Consensus 644 i~~~~~----~~w~~~~------------~~~~~~w~~~v~~il~~---~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~ 704 (831)
++.+.+ ..|..++ ......|...+.++++. ++++++|+++|.|.++++||||+++++++..
T Consensus 189 ~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR~a~~~~~~~ 268 (384)
T PLN02580 189 IMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWPL 268 (384)
T ss_pred eecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeCCCCchHHHH
Confidence 986522 1222110 11135677666666665 5567899999999999999999998876555
Q ss_pred HHHHHHHHHHhHhcCCC-eEEEEcCeEEEEEe-CCCCHHHHHHHHHHHhhhcCCCcc-c--EEEEcCCchhHHHHHHcch
Q 044635 705 QAKELLDHLESVLANEP-VTVKSGQNLVEVKP-QGVNKGLVAKRLLSTMQEREMLPD-F--VLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 705 ~a~el~~~L~~~l~~~~-v~v~~g~~~vEV~p-~gvnKG~al~~Ll~~l~~~g~~~d-~--vla~GD~~NDe~Mf~~a~~ 779 (831)
+++++...+ .+.+ +.+..|+.++||+| .++|||.|+++|++.+ |+..+ + ++|||||.|||+||+++..
T Consensus 269 ~~~~l~~~l----~~~~~l~v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~---g~~~~d~~~pi~iGDD~TDedmF~~L~~ 341 (384)
T PLN02580 269 VAQCVHDVL----KKYPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESL---GLSNCDDVLPIYIGDDRTDEDAFKVLRE 341 (384)
T ss_pred HHHHHHHHH----HhCCceEEEeCCeEEEEecCCCCCHHHHHHHHHHhc---CCCcccceeEEEECCCchHHHHHHhhhc
Confidence 454444443 3443 78889999999999 5999999999999988 66543 3 5999999999999999864
Q ss_pred hcCCCCCCCCCceEEEEeCC--CCcccceEeCChhHHHHHHHHHHhhh
Q 044635 780 SMAGPSIAPRAEVFACTVGR--KPSKAKYYLDDTVEIVRLMQGLACVA 825 (831)
Q Consensus 780 ~~~~~~~~~~~~~~~v~vG~--~~s~A~y~l~d~~eV~~~L~~L~~~~ 825 (831)
.. ..++|.||+ +.+.|+|+|+|+++|..+|+.|+.-.
T Consensus 342 ~~---------~G~~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~~~ 380 (384)
T PLN02580 342 GN---------RGYGILVSSVPKESNAFYSLRDPSEVMEFLKSLVTWK 380 (384)
T ss_pred cC---------CceEEEEecCCCCccceEEcCCHHHHHHHHHHHHHhh
Confidence 21 126777775 68999999999999999999998753
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-26 Score=244.90 Aligned_cols=225 Identities=20% Similarity=0.284 Sum_probs=160.7
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCCCc
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRRDE 650 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~~~ 650 (831)
.+|+|++|+||||++ .++.++++++++|+++.+ +|..|+|+|||+...+.+.+..+. ..++|++||++|++.+..
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~al~~~~~-~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 77 (264)
T COG0561 2 MIKLLAFDLDGTLLD---SNKTISPETKEALARLRE-KGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGEL 77 (264)
T ss_pred CeeEEEEcCCCCccC---CCCccCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcE
Confidence 579999999999999 677799999999999976 699999999999999999998874 337999999999998433
Q ss_pred eEEEcCCcCCccHHHHHHHHHHHHhcc--CCCeeEeeccceEE------------E-----eeccC---CC------ccc
Q 044635 651 EWETCIPVADCGWKQIAEPVMKLYTET--TDGSTIEDKETALV------------W-----SYEDA---DP------DFG 702 (831)
Q Consensus 651 ~w~~~~~~~~~~w~~~v~~il~~~~e~--~~gs~ie~k~~~l~------------~-----~~~~~---d~------~~~ 702 (831)
.....+ + ++.+..+++...+. ....+......... . ..... +. ...
T Consensus 78 i~~~~l---~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (264)
T COG0561 78 LFQKPL---S---REDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKD 151 (264)
T ss_pred EeeecC---C---HHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecC
Confidence 333332 1 34556666554322 11111111100000 0 00000 00 001
Q ss_pred hHHHHHHHHHHHhHhcCCCeEEEEcCeE-EEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhc
Q 044635 703 SCQAKELLDHLESVLANEPVTVKSGQNL-VEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSM 781 (831)
Q Consensus 703 ~~~a~el~~~L~~~l~~~~v~v~~g~~~-vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~ 781 (831)
.....++...+.+.+......+.++..+ +||+|+|+|||.|+++|++++ |+++++|+||||+.||++||+.++
T Consensus 152 ~~~~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~l---gi~~~~v~afGD~~ND~~Ml~~ag--- 225 (264)
T COG0561 152 HEILEELVEALRKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLL---GIKLEEVIAFGDSTNDIEMLEVAG--- 225 (264)
T ss_pred hHhHHHHHHHHhhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHh---CCCHHHeEEeCCccccHHHHHhcC---
Confidence 1233445555555555455566666554 999999999999999999998 999999999999999999999998
Q ss_pred CCCCCCCCCceEEEEeCCC----CcccceEe--CChhHHHHHHHHHHh
Q 044635 782 AGPSIAPRAEVFACTVGRK----PSKAKYYL--DDTVEIVRLMQGLAC 823 (831)
Q Consensus 782 ~~~~~~~~~~~~~v~vG~~----~s~A~y~l--~d~~eV~~~L~~L~~ 823 (831)
++|+|||+ +..|++++ ++.++|.+.|+++..
T Consensus 226 -----------~gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~~~ 262 (264)
T COG0561 226 -----------LGVAMGNADEELKELADYVTTSNDEDGVAEALEKLLL 262 (264)
T ss_pred -----------eeeeccCCCHHHHhhCCcccCCccchHHHHHHHHHhc
Confidence 47888886 46788664 578999999998753
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.9e-26 Score=244.59 Aligned_cols=224 Identities=17% Similarity=0.187 Sum_probs=155.6
Q ss_pred ceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCCCc-
Q 044635 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRRDE- 650 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~~~- 650 (831)
+|+|++|+||||++ .++.++++++++|++|.+ +|+.|+++|||+...+.+++..+. ..++|+.||+.|++..+.
T Consensus 2 ~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~ 77 (272)
T PRK15126 2 ARLAAFDMDGTLLM---PDHHLGEKTLSTLARLRE-RDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGEL 77 (272)
T ss_pred ccEEEEeCCCcCcC---CCCcCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCE
Confidence 68999999999998 677899999999999977 699999999999999999987763 457899999999964443
Q ss_pred eEEEcCCcCCccHHHHHHHHHHHHhcc--------CCCeeEeeccc---------eEEEeec---cCC-Ccc-------c
Q 044635 651 EWETCIPVADCGWKQIAEPVMKLYTET--------TDGSTIEDKET---------ALVWSYE---DAD-PDF-------G 702 (831)
Q Consensus 651 ~w~~~~~~~~~~w~~~v~~il~~~~e~--------~~gs~ie~k~~---------~l~~~~~---~~d-~~~-------~ 702 (831)
.+...++ .+.+.++++...+. ..+.+...... ...+... ... ... .
T Consensus 78 l~~~~i~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~ 151 (272)
T PRK15126 78 LHRQDLP------ADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGD 151 (272)
T ss_pred EEeecCC------HHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECC
Confidence 3333322 23455555433221 11111110000 0000000 000 000 1
Q ss_pred hHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcC
Q 044635 703 SCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMA 782 (831)
Q Consensus 703 ~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~ 782 (831)
.....++...+.+.+......+.++..++||+|+++|||+|+++|++++ |+++++++||||+.||++||+.++.
T Consensus 152 ~~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~---gi~~~~v~afGD~~NDi~Ml~~ag~--- 225 (272)
T PRK15126 152 HDDLTRLQIQLNEALGERAHLCFSATDCLEVLPVGCNKGAALAVLSQHL---GLSLADCMAFGDAMNDREMLGSVGR--- 225 (272)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHh---CCCHHHeEEecCCHHHHHHHHHcCC---
Confidence 1223444555555443322234456789999999999999999999999 9999999999999999999999984
Q ss_pred CCCCCCCCceEEEEeCCC----Ccccce--Ee--CChhHHHHHHHHHHh
Q 044635 783 GPSIAPRAEVFACTVGRK----PSKAKY--YL--DDTVEIVRLMQGLAC 823 (831)
Q Consensus 783 ~~~~~~~~~~~~v~vG~~----~s~A~y--~l--~d~~eV~~~L~~L~~ 823 (831)
+++|||+ +..|+| ++ ++.++|.++|+++..
T Consensus 226 -----------~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~~~~ 263 (272)
T PRK15126 226 -----------GFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLD 263 (272)
T ss_pred -----------ceeccCChHHHHHhCCCCeecCCCcchHHHHHHHHHhc
Confidence 6778876 466776 44 478999999999874
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.6e-26 Score=242.29 Aligned_cols=223 Identities=13% Similarity=0.169 Sum_probs=153.1
Q ss_pred ceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCCCce
Q 044635 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRRDEE 651 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~~~~ 651 (831)
+|+|++|+||||++ .++.++++++++|++|.+ +|+.|+|||||+...+.+.+..+. ..++|+.||+.|++.++..
T Consensus 2 ikli~~DlDGTLl~---~~~~is~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~ 77 (266)
T PRK10976 2 YQVVASDLDGTLLS---PDHTLSPYAKETLKLLTA-RGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNL 77 (266)
T ss_pred ceEEEEeCCCCCcC---CCCcCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCE
Confidence 58999999999998 677899999999999977 699999999999999999887773 4578999999998753332
Q ss_pred -EEEcCCcCCccHHHHHHHHHHHHhcc---------CCCeeEeeccc-----------eEEEe-eccCCC-cc-------
Q 044635 652 -WETCIPVADCGWKQIAEPVMKLYTET---------TDGSTIEDKET-----------ALVWS-YEDADP-DF------- 701 (831)
Q Consensus 652 -w~~~~~~~~~~w~~~v~~il~~~~e~---------~~gs~ie~k~~-----------~l~~~-~~~~d~-~~------- 701 (831)
+...+ + .+.+.++++...+. ..+.++..... ..... ...... ..
T Consensus 78 i~~~~l---~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~ 151 (266)
T PRK10976 78 IFSHNL---D---RDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTC 151 (266)
T ss_pred ehhhcC---C---HHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEc
Confidence 22222 1 24455555543221 11111111000 00000 000000 00
Q ss_pred -chHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchh
Q 044635 702 -GSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISS 780 (831)
Q Consensus 702 -~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~ 780 (831)
......++.+.+.+.+......+.++..++||+|+++|||.|+++|++++ |+++++|+||||+.||++||+.++.
T Consensus 152 ~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~l---gi~~~~viafGD~~NDi~Ml~~ag~- 227 (266)
T PRK10976 152 DSHEKLLPLEQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKL---GYSLKDCIAFGDGMNDAEMLSMAGK- 227 (266)
T ss_pred CCHHHHHHHHHHHHHHhCCcEEEEEeCCceEEEEcCCCChHHHHHHHHHHc---CCCHHHeEEEcCCcccHHHHHHcCC-
Confidence 01122334444444443222234567789999999999999999999999 9999999999999999999999985
Q ss_pred cCCCCCCCCCceEEEEeCCC----Ccccc--eEe--CChhHHHHHHHHHH
Q 044635 781 MAGPSIAPRAEVFACTVGRK----PSKAK--YYL--DDTVEIVRLMQGLA 822 (831)
Q Consensus 781 ~~~~~~~~~~~~~~v~vG~~----~s~A~--y~l--~d~~eV~~~L~~L~ 822 (831)
+|+|||+ +..|+ +++ ++.++|.++|+++.
T Consensus 228 -------------~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~~~ 264 (266)
T PRK10976 228 -------------GCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRKLY 264 (266)
T ss_pred -------------CeeecCCcHHHHHhCCCCeecccCchHHHHHHHHHHh
Confidence 5778876 45665 555 57899999999875
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-25 Score=239.97 Aligned_cols=224 Identities=17% Similarity=0.230 Sum_probs=154.3
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC----CceEEecCCEEEEeC
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE----NLGIAAEHGYFFRLR 647 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~----~~~liaenGa~i~~~ 647 (831)
++|+|++|+||||++ .++.++++++++|++|.+ .|+.|+|||||+...+...+..+. ..++|+.||+.|+..
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~ 77 (270)
T PRK10513 2 AIKLIAIDMDGTLLL---PDHTISPAVKQAIAAARA-KGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKA 77 (270)
T ss_pred ceEEEEEecCCcCcC---CCCccCHHHHHHHHHHHH-CCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEEC
Confidence 478999999999998 677899999999999977 699999999999999998887763 246899999999874
Q ss_pred C-Cc-eEEEcCCcCCccHHHHHHHHHHHHhcc--------CCCeeEeeccce-----------EEEeecc---CCCc--c
Q 044635 648 R-DE-EWETCIPVADCGWKQIAEPVMKLYTET--------TDGSTIEDKETA-----------LVWSYED---ADPD--F 701 (831)
Q Consensus 648 ~-~~-~w~~~~~~~~~~w~~~v~~il~~~~e~--------~~gs~ie~k~~~-----------l~~~~~~---~d~~--~ 701 (831)
. +. .+...++ .+.+..+++...+. ..+.|...+... ....+.. .++. +
T Consensus 78 ~~~~~i~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (270)
T PRK10513 78 ADGETVAQTALS------YDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQF 151 (270)
T ss_pred CCCCEEEecCCC------HHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCc
Confidence 3 33 3333332 12334444332211 112222111100 0000000 0000 0
Q ss_pred ------c-hHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHH
Q 044635 702 ------G-SCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMF 774 (831)
Q Consensus 702 ------~-~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf 774 (831)
. .....++...+.+.+......+.++..++||+|+|+|||.|+++|++++ |+++++++||||+.||++||
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~---gi~~~~v~afGD~~NDi~Ml 228 (270)
T PRK10513 152 PKVMMIDEPEILDAAIARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHL---GIKPEEVMAIGDQENDIAMI 228 (270)
T ss_pred eEEEEeCCHHHHHHHHHHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHHH
Confidence 0 1122333344443332222234567789999999999999999999999 99999999999999999999
Q ss_pred HHcchhcCCCCCCCCCceEEEEeCCC----CcccceEe--CChhHHHHHHHHHH
Q 044635 775 EVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYL--DDTVEIVRLMQGLA 822 (831)
Q Consensus 775 ~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l--~d~~eV~~~L~~L~ 822 (831)
+.++ ++|+|||+ +..|+|++ ++.++|.++|+++.
T Consensus 229 ~~ag--------------~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 229 EYAG--------------VGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred HhCC--------------ceEEecCccHHHHHhcCeeccCCCcchHHHHHHHHh
Confidence 9998 46888886 57899987 46899999999874
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-24 Score=249.61 Aligned_cols=230 Identities=16% Similarity=0.232 Sum_probs=157.4
Q ss_pred HHHHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC---C-------c
Q 044635 565 VSAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE---N-------L 634 (831)
Q Consensus 565 ~~~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~---~-------~ 634 (831)
.+.| +.++|+|++|+||||++ .++.++++++++|++|.+ .|+.|+|||||+...+..++..+. . .
T Consensus 301 ~~~~-~~~iKLIa~DLDGTLLn---~d~~Is~~t~eAI~kl~e-kGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~ 375 (580)
T PLN02887 301 LRFY-KPKFSYIFCDMDGTLLN---SKSQISETNAKALKEALS-RGVKVVIATGKARPAVIDILKMVDLAGKDGIISESS 375 (580)
T ss_pred hhhh-ccCccEEEEeCCCCCCC---CCCccCHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHhCcccccceEeecc
Confidence 3344 45789999999999999 678899999999999987 699999999999999988887652 1 2
Q ss_pred eEEecCCEEEEeCCCc-eEEEcCCcCCccHHHHHHHHHHHHhcc--------CCCeeEeeccceEE-Ee--ec--c---C
Q 044635 635 GIAAEHGYFFRLRRDE-EWETCIPVADCGWKQIAEPVMKLYTET--------TDGSTIEDKETALV-WS--YE--D---A 697 (831)
Q Consensus 635 ~liaenGa~i~~~~~~-~w~~~~~~~~~~w~~~v~~il~~~~e~--------~~gs~ie~k~~~l~-~~--~~--~---~ 697 (831)
+.|+.||+.|++..+. .+...++ .+.+.++++...+. .++.|......... ++ +. . .
T Consensus 376 p~I~~NGA~I~d~~g~~I~~~~L~------~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~i 449 (580)
T PLN02887 376 PGVFLQGLLVYGRQGREIYRSNLD------QEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEIM 449 (580)
T ss_pred cEEeecCeEEEECCCcEEEEEeCC------HHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhcccccccc
Confidence 4567799999864443 3443332 24455555543321 11111110000000 00 00 0 0
Q ss_pred -C-------Ccc------ch--HHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccE
Q 044635 698 -D-------PDF------GS--CQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFV 761 (831)
Q Consensus 698 -d-------~~~------~~--~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~v 761 (831)
+ ... .. ....++...+.+.+......+.++..++||+|+|+|||.|+++|++++ |+++++|
T Consensus 450 ~~l~~~~~~~~i~Ki~~~~~~e~~~~~l~~~l~~~~~~~~~v~~S~~~~lEI~p~gvSKG~ALk~L~e~l---GI~~eev 526 (580)
T PLN02887 450 SSVDQLLAAADIQKVIFLDTAEGVSSVLRPYWSEATGDRANVVQAQPDMLEIVPPGTSKGNGVKMLLNHL---GVSPDEI 526 (580)
T ss_pred CCHHHhhcccCeeEEEEEcChHHHHHHHHHHHHHHhcCcEEEEEecCcEEEEecCCCCHHHHHHHHHHHc---CCCHHHE
Confidence 0 000 00 011223334444443322335567789999999999999999999999 9999999
Q ss_pred EEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEe--CChhHHHHHHHHHH
Q 044635 762 LCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYL--DDTVEIVRLMQGLA 822 (831)
Q Consensus 762 la~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l--~d~~eV~~~L~~L~ 822 (831)
+||||+.||++||+.++ ++|+|||+ +..|+|++ ++.++|.++|++++
T Consensus 527 iAFGDs~NDIeMLe~AG--------------~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek~~ 579 (580)
T PLN02887 527 MAIGDGENDIEMLQLAS--------------LGVALSNGAEKTKAVADVIGVSNDEDGVADAIYRYA 579 (580)
T ss_pred EEEecchhhHHHHHHCC--------------CEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHHhh
Confidence 99999999999999998 47888886 57899987 47899999999864
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-24 Score=232.99 Aligned_cols=222 Identities=17% Similarity=0.134 Sum_probs=150.6
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC--CceEEecCCEEEEeCCC
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE--NLGIAAEHGYFFRLRRD 649 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~--~~~liaenGa~i~~~~~ 649 (831)
.+++|++|+||||++ .++.++++++++|++|.+ +|+.|+++|||+...+..++..+. ..++|++||+.|+.+.+
T Consensus 6 ~~~lI~~DlDGTLL~---~~~~i~~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~ 81 (271)
T PRK03669 6 DPLLIFTDLDGTLLD---SHTYDWQPAAPWLTRLRE-AQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQ 81 (271)
T ss_pred CCeEEEEeCccCCcC---CCCcCcHHHHHHHHHHHH-cCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCc
Confidence 579999999999998 567788999999999976 699999999999999999988763 24799999999987643
Q ss_pred c-------eEEEcCCcCCccHHHHHHHHHHHHhccCCCee-Eeeccc-----eEEE---------eeccCCCcc----ch
Q 044635 650 E-------EWETCIPVADCGWKQIAEPVMKLYTETTDGST-IEDKET-----ALVW---------SYEDADPDF----GS 703 (831)
Q Consensus 650 ~-------~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~-ie~k~~-----~l~~---------~~~~~d~~~----~~ 703 (831)
. .+...+ + .+.+..+++...+...-.+ ...... .... ........+ ..
T Consensus 82 ~~~~~~~~~~~~~l---~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (271)
T PRK03669 82 WQDHPDFPRIISGI---S---HGEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSD 155 (271)
T ss_pred ccCCCCceEeecCC---C---HHHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCH
Confidence 1 111111 1 2345555554332101000 000000 0000 000000000 01
Q ss_pred HHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCC---CcccEEEEcCCchhHHHHHHcchh
Q 044635 704 CQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREM---LPDFVLCVGDDRSDEDMFEVIISS 780 (831)
Q Consensus 704 ~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~---~~d~vla~GD~~NDe~Mf~~a~~~ 780 (831)
....++.+.+.. ..+.+.++..++||+|+++|||.|+++|++++ |+ ++++|+||||+.||++||+.++.
T Consensus 156 ~~~~~~~~~l~~----~~~~~~~~~~~iEi~~~g~sKg~al~~l~~~l---gi~~~~~~~viafGDs~NDi~Ml~~ag~- 227 (271)
T PRK03669 156 ERMAQFTARLAE----LGLQFVQGARFWHVLDASAGKDQAANWLIATY---QQLSGTRPTTLGLGDGPNDAPLLDVMDY- 227 (271)
T ss_pred HHHHHHHHHHHH----CCCEEEecCeeEEEecCCCCHHHHHHHHHHHH---HhhcCCCceEEEEcCCHHHHHHHHhCCE-
Confidence 122333444432 23455556679999999999999999999999 99 99999999999999999999984
Q ss_pred cCCCCCCCCCceEEEEeCCC----------CcccceEeC--ChhHHHHHHHHHHhh
Q 044635 781 MAGPSIAPRAEVFACTVGRK----------PSKAKYYLD--DTVEIVRLMQGLACV 824 (831)
Q Consensus 781 ~~~~~~~~~~~~~~v~vG~~----------~s~A~y~l~--d~~eV~~~L~~L~~~ 824 (831)
+|+||+. +..|.|+++ +.+++.+.|+.+...
T Consensus 228 -------------gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~~~~~~ 270 (271)
T PRK03669 228 -------------AVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLDHFFSA 270 (271)
T ss_pred -------------EEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHHHHHhc
Confidence 6666632 236778885 577999999988653
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-24 Score=225.86 Aligned_cols=213 Identities=20% Similarity=0.218 Sum_probs=148.3
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCC-C
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRR-D 649 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~-~ 649 (831)
.+|+|++|+||||++ .++.+++++.++|++|.+ .|+.|+|+|||+...+.+++..+. +.++|++||+.++... +
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~ 77 (230)
T PRK01158 2 KIKAIAIDIDGTITD---KDRRLSLKAVEAIRKAEK-LGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDG 77 (230)
T ss_pred ceeEEEEecCCCcCC---CCCccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCC
Confidence 368999999999998 677899999999999986 699999999999999988876663 4579999999998763 2
Q ss_pred c-eEEEcCCcCCccHHHHHHHHHHHHhccCCCe--eEeec--cce--EEEeeccCCCccchHHHHHHHHHHHhHhcCCCe
Q 044635 650 E-EWETCIPVADCGWKQIAEPVMKLYTETTDGS--TIEDK--ETA--LVWSYEDADPDFGSCQAKELLDHLESVLANEPV 722 (831)
Q Consensus 650 ~-~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs--~ie~k--~~~--l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v 722 (831)
. .+.... + .+..+++...+..+.. .+... ... ....+.. . ..+++...++.. ...+
T Consensus 78 ~~~~~~~~---~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~l~~~--~~~~ 140 (230)
T PRK01158 78 KRIFLGDI---E-----ECEKAYSELKKRFPEASTSLTKLDPDYRKTEVALRRT----V---PVEEVRELLEEL--GLDL 140 (230)
T ss_pred CEEEEcch---H-----HHHHHHHHHHHhccccceeeecCCcccccceeeeccc----c---cHHHHHHHHHHc--CCcE
Confidence 2 233221 1 1222232222211111 01100 000 0000110 0 112233333322 2234
Q ss_pred EEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC--
Q 044635 723 TVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK-- 800 (831)
Q Consensus 723 ~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~-- 800 (831)
.+..+..++||.|+++|||.|++++++++ |++++++++|||+.||++||+.++ ++++|||+
T Consensus 141 ~~~~~~~~~ei~~~~~~Kg~al~~l~~~~---~i~~~~~i~~GD~~NDi~m~~~ag--------------~~vam~Na~~ 203 (230)
T PRK01158 141 EIVDSGFAIHIKSPGVNKGTGLKKLAELM---GIDPEEVAAIGDSENDLEMFEVAG--------------FGVAVANADE 203 (230)
T ss_pred EEEecceEEEEeeCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHHHHhcC--------------ceEEecCccH
Confidence 55556678999999999999999999998 999999999999999999999997 46788876
Q ss_pred --CcccceEe--CChhHHHHHHHHHH
Q 044635 801 --PSKAKYYL--DDTVEIVRLMQGLA 822 (831)
Q Consensus 801 --~s~A~y~l--~d~~eV~~~L~~L~ 822 (831)
+..|+|++ ++.++|++.|+++.
T Consensus 204 ~vk~~a~~v~~~n~~~Gv~~~l~~~~ 229 (230)
T PRK01158 204 ELKEAADYVTEKSYGEGVAEAIEHLL 229 (230)
T ss_pred HHHHhcceEecCCCcChHHHHHHHHh
Confidence 46789987 46788999998763
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.5e-24 Score=225.80 Aligned_cols=217 Identities=19% Similarity=0.279 Sum_probs=157.3
Q ss_pred EEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCCCceEEE
Q 044635 576 ILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRRDEEWET 654 (831)
Q Consensus 576 i~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~~~~w~~ 654 (831)
||+|+||||++ .+..++++++++|++|.+ .|+.++++|||++..+.+++..+. ..++|+.||+++....+.....
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l~~-~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~ 76 (254)
T PF08282_consen 1 IFSDLDGTLLN---SDGKISPETIEALKELQE-KGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYE 76 (254)
T ss_dssp EEEECCTTTCS---TTSSSCHHHHHHHHHHHH-TTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEE
T ss_pred cEEEECCceec---CCCeeCHHHHHHHHhhcc-cceEEEEEccCcccccccccccccchhhhcccccceeeecccccchh
Confidence 79999999999 677799999999999987 599999999999999999998774 4699999999995554444332
Q ss_pred cCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEE------------------Ee-ecc----CCCc-------cchH
Q 044635 655 CIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALV------------------WS-YED----ADPD-------FGSC 704 (831)
Q Consensus 655 ~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~------------------~~-~~~----~d~~-------~~~~ 704 (831)
.. .+ .+.+..+++...+..-...+...+.... +. ... .... ....
T Consensus 77 ~~--i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~ 151 (254)
T PF08282_consen 77 KP--ID---SDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPE 151 (254)
T ss_dssp ES--B----HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHH
T ss_pred hh--ee---ccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccch
Confidence 21 11 3445555555443211111111100000 00 000 0000 0123
Q ss_pred HHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCC
Q 044635 705 QAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGP 784 (831)
Q Consensus 705 ~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~ 784 (831)
+..++.+++.+.+.+....+.++..++||+|+++|||.|+++|++++ |++++++++|||+.||++||+.++
T Consensus 152 ~~~~l~~~l~~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~---~i~~~~~~~~GD~~ND~~Ml~~~~------ 222 (254)
T PF08282_consen 152 DLEQLREELKKKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYL---GISPEDIIAFGDSENDIEMLELAG------ 222 (254)
T ss_dssp HHHHHHHHHHHHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHH---TTSGGGEEEEESSGGGHHHHHHSS------
T ss_pred hhhhhhhhhccccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhc---ccccceeEEeecccccHhHHhhcC------
Confidence 55677778887776544667789999999999999999999999999 999999999999999999999997
Q ss_pred CCCCCCceEEEEeCCC----CcccceEeCC--hhHHHHHH
Q 044635 785 SIAPRAEVFACTVGRK----PSKAKYYLDD--TVEIVRLM 818 (831)
Q Consensus 785 ~~~~~~~~~~v~vG~~----~s~A~y~l~d--~~eV~~~L 818 (831)
++|+||++ +..|++++.+ .++|++.|
T Consensus 223 --------~~~am~na~~~~k~~a~~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 223 --------YSVAMGNATPELKKAADYITPSNNDDGVAKAI 254 (254)
T ss_dssp --------EEEEETTS-HHHHHHSSEEESSGTCTHHHHHH
T ss_pred --------eEEEEcCCCHHHHHhCCEEecCCCCChHHHhC
Confidence 57899987 5789998753 37787765
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-24 Score=223.80 Aligned_cols=192 Identities=28% Similarity=0.376 Sum_probs=149.9
Q ss_pred eEEecCCCccCCCCCCC-CCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCceEE
Q 044635 575 AILLDYDGTLMPQASID-KSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWE 653 (831)
Q Consensus 575 li~~D~DGTLl~~~~~~-~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~w~ 653 (831)
||++|+||||++ .+ ..+++++.++|++|+++ |+.|+|+|||+...+..+++.+ +.++|++||++++.+++..|.
T Consensus 1 li~~D~DgTL~~---~~~~~~~~~~~~~l~~l~~~-g~~~~i~TGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~~~~~ 75 (204)
T TIGR01484 1 LLFFDLDGTLLD---PNAHELSPETIEALERLREA-GVKVVLVTGRSLAEIKELLKQL-PLPLIAENGALIFYPGEILYI 75 (204)
T ss_pred CEEEeCcCCCcC---CCCCcCCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHhC-CCCEEECCCcEEEECCEEEEE
Confidence 689999999998 44 67999999999999884 7999999999999999999874 588999999999987666665
Q ss_pred EcCCcCCccHHH------HHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcC-CCeEEE-
Q 044635 654 TCIPVADCGWKQ------IAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLAN-EPVTVK- 725 (831)
Q Consensus 654 ~~~~~~~~~w~~------~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~-~~v~v~- 725 (831)
. . ...|.. .+..++..+.+.+++..++.+...+.+++... ........++...++....+ ..+.+.
T Consensus 76 ~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (204)
T TIGR01484 76 E--P--SDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGA--ELGQELDSKMRERLEKIGRNDLELEAIY 149 (204)
T ss_pred c--c--cccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEecc--chhhHHHHHHHHHHHhhccccCcEEEEE
Confidence 4 1 122332 22334444555677888888889999998864 11112234555555554322 346666
Q ss_pred EcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchh
Q 044635 726 SGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISS 780 (831)
Q Consensus 726 ~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~ 780 (831)
++..++||+|++++||.+++.+++++ +++++++++|||+.||++||+.++.+
T Consensus 150 s~~~~~ev~p~~~~K~~~~~~~~~~~---~~~~~~~~~~GD~~nD~~~~~~~~~~ 201 (204)
T TIGR01484 150 VGKTDLEVLPAGVDKGSALQALLKEL---NGKRDEILAFGDSGNDEEMFEVAGLA 201 (204)
T ss_pred ecCCEEEEecCCCChHHHHHHHHHHh---CCCHHHEEEEcCCHHHHHHHHHcCCc
Confidence 79999999999999999999999998 89999999999999999999999864
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.9e-23 Score=222.82 Aligned_cols=221 Identities=18% Similarity=0.275 Sum_probs=150.7
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCC-C
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRR-D 649 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~-~ 649 (831)
++|+|++|+||||++ .++.++++++++|++|.+ +|+.|+|||||+...+...+..+. ..++|+.||+.+++.. +
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~ai~~~~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~ 77 (272)
T PRK10530 2 TYRVIALDLDGTLLT---PKKTILPESLEALARARE-AGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAK 77 (272)
T ss_pred CccEEEEeCCCceEC---CCCccCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCC
Confidence 468999999999998 677899999999999987 699999999999999999888773 4469999999999753 3
Q ss_pred ceE-EEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceE------------EEe----------eccCCC-------
Q 044635 650 EEW-ETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETAL------------VWS----------YEDADP------- 699 (831)
Q Consensus 650 ~~w-~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l------------~~~----------~~~~d~------- 699 (831)
..+ ...++ .+.+.++++...+..-...+...+..+ .|. +...+.
T Consensus 78 ~~l~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (272)
T PRK10530 78 KVLEADPLP------VQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAARQ 151 (272)
T ss_pred EEEEecCCC------HHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHhh
Confidence 333 22222 244555555443221111111000000 000 000000
Q ss_pred -c--c--c-----hHHHHHHHHHHHhHhcCCCeE-EEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCc
Q 044635 700 -D--F--G-----SCQAKELLDHLESVLANEPVT-VKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDR 768 (831)
Q Consensus 700 -~--~--~-----~~~a~el~~~L~~~l~~~~v~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~ 768 (831)
. + . ....+++.+.+.+ ...+. ..++..++||.|+++|||.|++++++++ |++++++++|||+.
T Consensus 152 ~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~---gi~~~e~i~~GD~~ 225 (272)
T PRK10530 152 VNAIWKFALTHEDLPQLQHFAKHVEH---ELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQ---GWSMKNVVAFGDNF 225 (272)
T ss_pred cCCcEEEEEecCCHHHHHHHHHHHhh---hcCceEEEecCceEEEecCCCChHHHHHHHHHHc---CCCHHHeEEeCCCh
Confidence 0 0 0 0011122222222 22222 3345678999999999999999999998 99999999999999
Q ss_pred hhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEe--CChhHHHHHHHHHH
Q 044635 769 SDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYL--DDTVEIVRLMQGLA 822 (831)
Q Consensus 769 NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l--~d~~eV~~~L~~L~ 822 (831)
||++||+.++ ++|+||++ +..|+|++ ++.++|.++|+++.
T Consensus 226 NDi~m~~~ag--------------~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 226 NDISMLEAAG--------------LGVAMGNADDAVKARADLVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred hhHHHHHhcC--------------ceEEecCchHHHHHhCCEEEecCCCCcHHHHHHHHh
Confidence 9999999998 46788875 46788887 46789999998864
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.8e-23 Score=218.78 Aligned_cols=217 Identities=20% Similarity=0.278 Sum_probs=147.2
Q ss_pred eEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCCCc-eE
Q 044635 575 AILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRRDE-EW 652 (831)
Q Consensus 575 li~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~~~-~w 652 (831)
+|++|+||||++ .++.++++++++|++|.+ .|+.|+|+|||+...+.+.+..+. ..++|+.||+.++..++. .+
T Consensus 1 li~~DlDGTLl~---~~~~i~~~~~~~i~~l~~-~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~ 76 (256)
T TIGR00099 1 LIFIDLDGTLLN---DDHTISPSTKEALAKLRE-KGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILY 76 (256)
T ss_pred CEEEeCCCCCCC---CCCccCHHHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEe
Confidence 689999999999 677899999999999987 599999999999999999888773 348999999999976433 33
Q ss_pred EEcCCcCCccHHHHHHHHHHHHhccC--------CCeeEeeccce-EEEe----ecc---C-CC-----c-c-------c
Q 044635 653 ETCIPVADCGWKQIAEPVMKLYTETT--------DGSTIEDKETA-LVWS----YED---A-DP-----D-F-------G 702 (831)
Q Consensus 653 ~~~~~~~~~~w~~~v~~il~~~~e~~--------~gs~ie~k~~~-l~~~----~~~---~-d~-----~-~-------~ 702 (831)
...++ .+.+.++++.+.+.. .+.|+...... +... +.. . +. + + .
T Consensus 77 ~~~i~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (256)
T TIGR00099 77 KKPLD------LDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLD 150 (256)
T ss_pred ecCCC------HHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECC
Confidence 33332 244555555443321 11222111000 0000 000 0 00 0 0 0
Q ss_pred hHHHHHHHHHHHh-HhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhc
Q 044635 703 SCQAKELLDHLES-VLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSM 781 (831)
Q Consensus 703 ~~~a~el~~~L~~-~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~ 781 (831)
.....++...+.+ .+......+.++..++||+|+++|||.|++++++.+ |++++++++|||+.||++||+.++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~---~~~~~~~~~~GD~~nD~~m~~~~~~-- 225 (256)
T TIGR00099 151 PEDLDLLIEALNKLELEENVSVVSSGPYSIEITAKGVSKGSALQSLAEAL---GISLEDVIAFGDGMNDIEMLEAAGY-- 225 (256)
T ss_pred HHHHHHHHHHhhhhhhcCCEEEEEecCceEEecCCCCChHHHHHHHHHHc---CCCHHHEEEeCCcHHhHHHHHhCCc--
Confidence 1122333344432 122221234577889999999999999999999998 9999999999999999999999984
Q ss_pred CCCCCCCCCceEEEEeCCC----CcccceEeC--ChhHHHHHH
Q 044635 782 AGPSIAPRAEVFACTVGRK----PSKAKYYLD--DTVEIVRLM 818 (831)
Q Consensus 782 ~~~~~~~~~~~~~v~vG~~----~s~A~y~l~--d~~eV~~~L 818 (831)
+|+||++ +..|+|++. +.++|.++|
T Consensus 226 ------------~~a~~na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 226 ------------GVAMGNADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred ------------eeEecCchHHHHHhCCEEecCCCCcchhhhC
Confidence 5777775 467888874 567777653
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.7e-23 Score=214.25 Aligned_cols=211 Identities=21% Similarity=0.226 Sum_probs=143.2
Q ss_pred EEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCCC--ceE
Q 044635 576 ILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRRD--EEW 652 (831)
Q Consensus 576 i~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~~--~~w 652 (831)
|++|+||||++ .++.+++++.++|++|.+ .|+.|++||||+...+.+++..+. ..++|++||+.|+..++ ..|
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l~~-~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~ 76 (225)
T TIGR01482 1 IASDIDGTLTD---PNRAINESALEAIRKAES-VGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIF 76 (225)
T ss_pred CeEeccCccCC---CCcccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEE
Confidence 68999999998 667899999999999976 699999999999999988887764 56899999999988653 345
Q ss_pred EEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCeEEE
Q 044635 653 ETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVE 732 (831)
Q Consensus 653 ~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vE 732 (831)
...+ +..|................-.+ .. ...........++ ..+.++..+ +.. .+.+.++..++|
T Consensus 77 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~----~~~~~~~~~----~~~-~~~~~~~~~~~e 142 (225)
T TIGR01482 77 LAYL---EEEWFLDIVIAKTFPFSRLKVQY-PR-RASLVKMRYGIDV----DTVREIIKE----LGL-NLVAVDSGFDIH 142 (225)
T ss_pred eccc---CHHHHHHHHHhcccchhhhcccc-cc-ccceEEEeecCCH----HHHHHHHHh----cCc-eEEEecCCcEEE
Confidence 4332 22343221111100000000000 00 0011111111111 112222222 211 233335667999
Q ss_pred EEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEe
Q 044635 733 VKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYL 808 (831)
Q Consensus 733 V~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l 808 (831)
|+|+++|||.+++++++++ |++++++++|||+.||++||+.++ ++++|||+ +..|+|++
T Consensus 143 i~~~~~~K~~~i~~l~~~~---~i~~~~~i~~GD~~NDi~m~~~ag--------------~~vam~Na~~~~k~~A~~vt 205 (225)
T TIGR01482 143 ILPQGVNKGVAVKKLKEKL---GIKPGETLVCGDSENDIDLFEVPG--------------FGVAVANAQPELKEWADYVT 205 (225)
T ss_pred EeeCCCCHHHHHHHHHHHh---CCCHHHEEEECCCHhhHHHHHhcC--------------ceEEcCChhHHHHHhcCeec
Confidence 9999999999999999998 999999999999999999999998 46888886 57899987
Q ss_pred C--ChhH----HHHHHHHH
Q 044635 809 D--DTVE----IVRLMQGL 821 (831)
Q Consensus 809 ~--d~~e----V~~~L~~L 821 (831)
. +.++ |.+.|+++
T Consensus 206 ~~~~~~G~~~~v~~~l~~~ 224 (225)
T TIGR01482 206 ESPYGEGGAEAIGEILQAI 224 (225)
T ss_pred CCCCCCcHHHHHHHHHHhh
Confidence 4 5677 88888765
|
catalyze the same reaction as SPP. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.4e-23 Score=218.74 Aligned_cols=221 Identities=17% Similarity=0.247 Sum_probs=150.7
Q ss_pred eeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC---CCceEEecCCEEEEeCCC-
Q 044635 574 RAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC---ENLGIAAEHGYFFRLRRD- 649 (831)
Q Consensus 574 rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~---~~~~liaenGa~i~~~~~- 649 (831)
.+|++|+||||+++...+...++++.++++++.+ +|+.|+++|||+...+..+...+ ....+|++||+.|+.++.
T Consensus 2 ~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~-~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~ 80 (249)
T TIGR01485 2 LLLVSDLDNTLVDHTDGDNQALLRLNALLEDHRG-EDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAE 80 (249)
T ss_pred eEEEEcCCCcCcCCCCCChHHHHHHHHHHHHhhc-cCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCC
Confidence 5899999999997433456678999999999976 68999999999999999886543 233589999999987541
Q ss_pred ---ceEEEcCCcCCccHH-HHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCC--Ce-
Q 044635 650 ---EEWETCIPVADCGWK-QIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANE--PV- 722 (831)
Q Consensus 650 ---~~w~~~~~~~~~~w~-~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~--~v- 722 (831)
..|... ....|. +.+..+...+...++....+.+...+.+..... .+.++...+.+.+... .+
T Consensus 81 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~-------~~~~~~~~l~~~l~~~~~~~~ 150 (249)
T TIGR01485 81 VPDQHWAEY---LSEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPE-------AAPEVIKQLTEMLKETGLDVK 150 (249)
T ss_pred cCCHHHHHH---HhcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechh-------hhhHHHHHHHHHHHhcCCCEE
Confidence 111111 112343 223334333433334433344445555543321 1223344444444332 23
Q ss_pred EEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCCc
Q 044635 723 TVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPS 802 (831)
Q Consensus 723 ~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~s 802 (831)
.+.++..++||+|+++|||.|++++++++ |++++++++|||+.||++||+.++. .+|+|+|+..
T Consensus 151 ~~~~~~~~ldi~~~~~~K~~al~~l~~~~---~i~~~~~i~~GD~~ND~~ml~~~~~-------------~~va~~na~~ 214 (249)
T TIGR01485 151 LIYSSGKDLDILPQGSGKGQALQYLLQKL---AMEPSQTLVCGDSGNDIELFEIGSV-------------RGVIVSNAQE 214 (249)
T ss_pred EEEECCceEEEEeCCCChHHHHHHHHHHc---CCCccCEEEEECChhHHHHHHccCC-------------cEEEECCCHH
Confidence 34678899999999999999999999998 9999999999999999999998431 4677887621
Q ss_pred ----cc-------ceEeC--ChhHHHHHHHHH
Q 044635 803 ----KA-------KYYLD--DTVEIVRLMQGL 821 (831)
Q Consensus 803 ----~A-------~y~l~--d~~eV~~~L~~L 821 (831)
.| .|+.+ .++++++.|+.+
T Consensus 215 ~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~~ 246 (249)
T TIGR01485 215 ELLQWYDENAKDKIYHASERCAGGIIEAIAHF 246 (249)
T ss_pred HHHHHHHhcccCcEEEecCCCcHHHHHHHHHc
Confidence 21 15554 468899888875
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-22 Score=210.46 Aligned_cols=208 Identities=19% Similarity=0.267 Sum_probs=141.4
Q ss_pred ceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCCCce
Q 044635 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRRDEE 651 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~~~~ 651 (831)
+|+|++|+||||++ .++.+++++.++|++|++ +|+.|+++|||++..+..++..+. ..++|++||+.+++.++..
T Consensus 1 ik~v~~DlDGTLl~---~~~~i~~~~~~~i~~l~~-~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~ 76 (215)
T TIGR01487 1 IKLVAIDIDGTLTE---PNRMISERAIEAIRKAEK-KGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDI 76 (215)
T ss_pred CcEEEEecCCCcCC---CCcccCHHHHHHHHHHHH-CCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcE
Confidence 47999999999998 677899999999999977 699999999999999999887774 3479999999999865432
Q ss_pred EEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCeEE
Q 044635 652 WETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLV 731 (831)
Q Consensus 652 w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~v 731 (831)
.. . .....|....... ..+....-.. ........+... .+ ..+.+...++ ...+.+..+..++
T Consensus 77 ~~--~-~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~--~~-----~~~~~~~~l~----~~~~~~~~~~~~~ 139 (215)
T TIGR01487 77 FL--A-NMEEEWFLDEEKK-KRFPRDRLSN--EYPRASLVIMRE--GK-----DVDEVREIIK----ERGLNLVDSGFAI 139 (215)
T ss_pred EE--e-cccchhhHHHhhh-hhhhhhhccc--ccceeEEEEecC--Cc-----cHHHHHHHHH----hCCeEEEecCceE
Confidence 11 1 1111221100000 0010000000 000011111111 00 1123333332 2344555566789
Q ss_pred EEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceE
Q 044635 732 EVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYY 807 (831)
Q Consensus 732 EV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~ 807 (831)
||.|.+++||.+++++++++ |++++++++|||+.||++||+.++ ++|+|||+ +..|+|+
T Consensus 140 ei~~~~~~K~~~i~~l~~~~---~i~~~~~i~iGDs~ND~~ml~~ag--------------~~vam~na~~~~k~~A~~v 202 (215)
T TIGR01487 140 HIMKKGVDKGVGVEKLKELL---GIKPEEVAAIGDSENDIDLFRVVG--------------FKVAVANADDQLKEIADYV 202 (215)
T ss_pred EEecCCCChHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHhCC--------------CeEEcCCccHHHHHhCCEE
Confidence 99999999999999999998 999999999999999999999998 46788876 5788998
Q ss_pred eC--ChhHHHHHH
Q 044635 808 LD--DTVEIVRLM 818 (831)
Q Consensus 808 l~--d~~eV~~~L 818 (831)
+. +.++|.++|
T Consensus 203 ~~~~~~~Gv~~~l 215 (215)
T TIGR01487 203 TSNPYGEGVVEVL 215 (215)
T ss_pred cCCCCCchhhhhC
Confidence 84 567777653
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.3e-22 Score=212.97 Aligned_cols=219 Identities=16% Similarity=0.078 Sum_probs=146.4
Q ss_pred eEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCCCce--
Q 044635 575 AILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRRDEE-- 651 (831)
Q Consensus 575 li~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~~~~-- 651 (831)
+|++|+||||++ .++...+.++++|++|.+ .|+.|+++|||+...+..++..+. ..++|++||++|+..++..
T Consensus 1 li~~DlDGTll~---~~~~~~~~~~~~i~~l~~-~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~ 76 (256)
T TIGR01486 1 WIFTDLDGTLLD---PHGYDWGPAKEVLERLQE-LGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTE 76 (256)
T ss_pred CEEEcCCCCCcC---CCCcCchHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccC
Confidence 689999999998 455344579999999977 599999999999999999998774 4689999999999865432
Q ss_pred ---EEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccc---------eE-------EEeeccCCCccchHHHHHHHHH
Q 044635 652 ---WETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKET---------AL-------VWSYEDADPDFGSCQAKELLDH 712 (831)
Q Consensus 652 ---w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~---------~l-------~~~~~~~d~~~~~~~a~el~~~ 712 (831)
|.... ...| +.+.++++.+.+..+..+...... .+ ... .....-+.. ..+....
T Consensus 77 ~~~~~~~~---~i~~-~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~ 149 (256)
T TIGR01486 77 PEYPVIAL---GIPY-EKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQR-REYSETILW--SEERRER 149 (256)
T ss_pred CCeEEEEc---CCCH-HHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhh-CccCCceec--ChHHHHH
Confidence 22111 1222 556666665433221111100000 00 000 000000000 1122333
Q ss_pred HHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCC--cccEEEEcCCchhHHHHHHcchhcCCCCCCCCC
Q 044635 713 LESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREML--PDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRA 790 (831)
Q Consensus 713 L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~--~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~ 790 (831)
+.+.+....+.+..+..++||.|+++|||.|++++++++ |++ .+++++|||+.||++||+.++.
T Consensus 150 ~~~~~~~~~~~~~~s~~~~ei~~~~~~Kg~ai~~l~~~~---~i~~~~~~~~a~GD~~ND~~Ml~~ag~----------- 215 (256)
T TIGR01486 150 FTEALVELGLEVTHGNRFYHVLGAGSDKGKAANALKQFY---NQPGGAIKVVGLGDSPNDLPLLEVVDL----------- 215 (256)
T ss_pred HHHHHHHcCCEEEeCCceEEEecCCCCHHHHHHHHHHHH---hhcCCCceEEEEcCCHhhHHHHHHCCE-----------
Confidence 333333334555556679999999999999999999998 888 9999999999999999999984
Q ss_pred ceEEEEeCCCC-------cc--cc-eEe--CChhHHHHHHHHH
Q 044635 791 EVFACTVGRKP-------SK--AK-YYL--DDTVEIVRLMQGL 821 (831)
Q Consensus 791 ~~~~v~vG~~~-------s~--A~-y~l--~d~~eV~~~L~~L 821 (831)
+|+|||++ .. |. |++ ++.++|.+.|+++
T Consensus 216 ---~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~~ 255 (256)
T TIGR01486 216 ---AVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEHL 255 (256)
T ss_pred ---EEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHHh
Confidence 66777653 22 34 666 4689999999876
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-21 Score=205.72 Aligned_cols=198 Identities=17% Similarity=0.138 Sum_probs=129.1
Q ss_pred cCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC--CC-ceEEecCCEEEEeC
Q 044635 571 TTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC--EN-LGIAAEHGYFFRLR 647 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~--~~-~~liaenGa~i~~~ 647 (831)
.+.|+|++|+||||++ .++.++++++++|+++.+ .|+.|+|||||+...+.+.++.. .. .++|+.||+.|+..
T Consensus 3 ~~~klia~DlDGTLL~---~~~~is~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~~ 78 (247)
T PTZ00174 3 MKKTILLFDVDGTLTK---PRNPITQEMKDTLAKLKS-KGFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYKD 78 (247)
T ss_pred CCCeEEEEECcCCCcC---CCCCCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEEC
Confidence 4689999999999999 788899999999999977 69999999999999998888632 22 46899999999975
Q ss_pred CCceEEEcCCc-CCccHHHHHHHHHHHHh-----ccCCCeeEeeccceEEEeec-cCCC-----cc----c-hHHHHHHH
Q 044635 648 RDEEWETCIPV-ADCGWKQIAEPVMKLYT-----ETTDGSTIEDKETALVWSYE-DADP-----DF----G-SCQAKELL 710 (831)
Q Consensus 648 ~~~~w~~~~~~-~~~~w~~~v~~il~~~~-----e~~~gs~ie~k~~~l~~~~~-~~d~-----~~----~-~~~a~el~ 710 (831)
+...+...+.. .+.++...+...++.+. ....+.+++.........+. .... ++ . .....++.
T Consensus 79 ~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (247)
T PTZ00174 79 GELFHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKYDKEHHIREKFI 158 (247)
T ss_pred CeEEEEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhcCCcchHHHHHH
Confidence 43333332211 22233333333332220 11223443332111111110 0000 00 0 11224555
Q ss_pred HHHHhHhcCCCeEEEE-cCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcC----CchhHHHHHHcch
Q 044635 711 DHLESVLANEPVTVKS-GQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGD----DRSDEDMFEVIIS 779 (831)
Q Consensus 711 ~~L~~~l~~~~v~v~~-g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD----~~NDe~Mf~~a~~ 779 (831)
+.+.+.+.+..+.... +..++||+|+|+|||.|+++|+++ +++|+|||| +.||++||+.++.
T Consensus 159 ~~l~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~-------~~eviafGD~~~~~~NDieMl~~~~~ 225 (247)
T PTZ00174 159 QDLKKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND-------FKEIHFFGDKTFEGGNDYEIYNDPRT 225 (247)
T ss_pred HHHHHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh-------hhhEEEEcccCCCCCCcHhhhhcCCC
Confidence 6665555443344343 457999999999999999999987 489999999 8999999998753
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.4e-21 Score=205.59 Aligned_cols=214 Identities=18% Similarity=0.247 Sum_probs=146.0
Q ss_pred eEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC---CceEEecCCEEEEeCCCc-
Q 044635 575 AILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE---NLGIAAEHGYFFRLRRDE- 650 (831)
Q Consensus 575 li~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~---~~~liaenGa~i~~~~~~- 650 (831)
+|++|+||||++ .++.+++.+ ++++ + .++|+.++++|||+...+.+.+..+. ...+|++||+.|+.....
T Consensus 1 li~~DlDgTLl~---~~~~~~~~~-~~~~-~-~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~~ 74 (236)
T TIGR02471 1 LIITDLDNTLLG---DDEGLASFV-ELLR-G-SGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPELQ 74 (236)
T ss_pred CeEEeccccccC---CHHHHHHHH-HHHH-h-cCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCCC
Confidence 689999999998 566676666 7776 5 44699999999999999999998762 235999999998765321
Q ss_pred ---eEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccc--eEEEeeccCCCccchHHHHHHHHHHHhHhcCCCe-EE
Q 044635 651 ---EWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKET--ALVWSYEDADPDFGSCQAKELLDHLESVLANEPV-TV 724 (831)
Q Consensus 651 ---~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~--~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v-~v 724 (831)
.|... ....|.. ..+ ..+....++..++.+.. ...+++... ++.. ....++...++... ..+ .+
T Consensus 75 ~~~~~~~~---~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~-~~~~~~~~~l~~~~--~~~~~~ 144 (236)
T TIGR02471 75 PDRFWQKH---IDHDWRR--QAV-VEALADIPGLTLQDDQEQGPFKISYLLD-PEGE-PILPQIRQRLRQQS--QAAKVI 144 (236)
T ss_pred CChhHHHH---HhcCCCH--HHH-HHHHhcCCCcEeCChhcCCCeeEEEEEC-cccc-hHHHHHHHHHHhcc--CCEEEE
Confidence 11100 0111211 112 23333456655554431 244555532 2211 12334444444421 222 34
Q ss_pred EEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----
Q 044635 725 KSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK---- 800 (831)
Q Consensus 725 ~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~---- 800 (831)
.++..++||+|+++|||.|+++|++++ |++++++++|||+.||++||+.++ ++++||++
T Consensus 145 ~~~~~~~ei~~~~~~K~~al~~l~~~~---g~~~~~~i~~GD~~nD~~ml~~~~--------------~~iav~na~~~~ 207 (236)
T TIGR02471 145 LSCGWFLDVLPLRASKGLALRYLSYRW---GLPLEQILVAGDSGNDEEMLRGLT--------------LGVVVGNHDPEL 207 (236)
T ss_pred EECCceEEEeeCCCChHHHHHHHHHHh---CCCHHHEEEEcCCccHHHHHcCCC--------------cEEEEcCCcHHH
Confidence 567789999999999999999999998 999999999999999999999886 46788886
Q ss_pred Ccccc----eEeC--ChhHHHHHHHHH
Q 044635 801 PSKAK----YYLD--DTVEIVRLMQGL 821 (831)
Q Consensus 801 ~s~A~----y~l~--d~~eV~~~L~~L 821 (831)
+..|+ |+++ +.++|.+.|+.+
T Consensus 208 k~~a~~~~~~v~~~~~~~Gv~~~i~~~ 234 (236)
T TIGR02471 208 EGLRHQQRIYFANNPHAFGILEGINHY 234 (236)
T ss_pred HHhhcCCcEEEcCCCChhHHHHHHHhh
Confidence 45677 6663 567899999865
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.5e-21 Score=206.97 Aligned_cols=225 Identities=15% Similarity=0.119 Sum_probs=148.6
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCCCc
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRRDE 650 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~~~ 650 (831)
.+|+|++|+||||++ .++.+++++.++|++|.+ .|+.|+|+|||+...+...+..+. ..++|+.||++|+.+++.
T Consensus 3 ~~kli~~DlDGTLl~---~~~~~~~~~~~ai~~l~~-~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~ 78 (273)
T PRK00192 3 MKLLVFTDLDGTLLD---HHTYSYEPAKPALKALKE-KGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNY 78 (273)
T ss_pred cceEEEEcCcccCcC---CCCcCcHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccc
Confidence 478999999999998 566788999999999976 699999999999999998888763 457999999999875431
Q ss_pred -------------eEEEcCCcCCccHHHHHHHHHHHHhccCCCeeE-eec----cc----eEEE---e-ecc--CCCccc
Q 044635 651 -------------EWETCIPVADCGWKQIAEPVMKLYTETTDGSTI-EDK----ET----ALVW---S-YED--ADPDFG 702 (831)
Q Consensus 651 -------------~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~i-e~k----~~----~l~~---~-~~~--~d~~~~ 702 (831)
.|..... .+ .+.+.++++.+.+.....+. ... +. .+.. . ... ...-+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (273)
T PRK00192 79 FPFQPDGERLKGDYWVIELG---PP-YEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFL 154 (273)
T ss_pred cccCCccccccCCceEEEcC---CC-HHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCcee
Confidence 2322111 12 24455555433221110000 000 00 0000 0 000 000000
Q ss_pred hHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCc-ccEEEEcCCchhHHHHHHcchhc
Q 044635 703 SCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLP-DFVLCVGDDRSDEDMFEVIISSM 781 (831)
Q Consensus 703 ~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~-d~vla~GD~~NDe~Mf~~a~~~~ 781 (831)
.....+..+.+...+...++.+..++.++||+|++ +||.|++++++++ |+++ +++++|||+.||++||+.++.
T Consensus 155 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~-~Kg~al~~l~~~~---~i~~~~~v~~~GDs~NDi~m~~~ag~-- 228 (273)
T PRK00192 155 WNGSEAAKERFEEALKRLGLKVTRGGRFLHLLGGG-DKGKAVRWLKELY---RRQDGVETIALGDSPNDLPMLEAADI-- 228 (273)
T ss_pred ecCchHHHHHHHHHHHHcCCEEEECCeEEEEeCCC-CHHHHHHHHHHHH---hccCCceEEEEcCChhhHHHHHhCCe--
Confidence 00011223334443433455666678899999999 9999999999998 9999 999999999999999999984
Q ss_pred CCCCCCCCCceEEEEeCCCC--------ccc-ceEe----CChhHHHHHHHHHH
Q 044635 782 AGPSIAPRAEVFACTVGRKP--------SKA-KYYL----DDTVEIVRLMQGLA 822 (831)
Q Consensus 782 ~~~~~~~~~~~~~v~vG~~~--------s~A-~y~l----~d~~eV~~~L~~L~ 822 (831)
+|+|||++ ..| +++. ++.++|++.|+++.
T Consensus 229 ------------~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~~~ 270 (273)
T PRK00192 229 ------------AVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINKLL 270 (273)
T ss_pred ------------eEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHHHH
Confidence 67777753 233 3544 35789999999874
|
|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.1e-21 Score=213.24 Aligned_cols=299 Identities=16% Similarity=0.159 Sum_probs=200.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHh
Q 044635 177 RSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALL 256 (831)
Q Consensus 177 ~~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll 256 (831)
...+..|...++.++.++....+ .|+|++|+++.+.++...+. .++|+.+++|+++.... . .....+.+.+.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~--~Dvv~~h~~~~~~~~~~~~~--~~~~~i~~~H~~~~~~~--~--~~~~~~~~~~~ 134 (372)
T cd03792 63 EEEKEIYLEWNEENAERPLLDLD--ADVVVIHDPQPLALPLFKKK--RGRPWIWRCHIDLSSPN--R--RVWDFLQPYIE 134 (372)
T ss_pred HHHHHHHHHHHHHHhccccccCC--CCEEEECCCCchhHHHhhhc--CCCeEEEEeeeecCCCc--H--HHHHHHHHHHH
Confidence 44678888888888776433333 49999999998877766543 36789999999886431 0 01123334445
Q ss_pred cCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-
Q 044635 257 NSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH- 335 (831)
Q Consensus 257 ~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~- 335 (831)
.+|.+.+.+.++++.++ ..+ ++ ++|+|||+...... +........++++++
T Consensus 135 ~~d~~i~~~~~~~~~~~----------------------~~~--~~-vipngvd~~~~~~~---~~~~~~~~~~~~~~~~ 186 (372)
T cd03792 135 DYDAAVFHLPEYVPPQV----------------------PPR--KV-IIPPSIDPLSGKNR---ELSPADIEYILEKYGI 186 (372)
T ss_pred hCCEEeecHHHhcCCCC----------------------CCc--eE-EeCCCCCCCccccC---CCCHHHHHHHHHHhCC
Confidence 67877776633221110 112 23 89999997532111 111233456677787
Q ss_pred cCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCc
Q 044635 336 DQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYD 415 (831)
Q Consensus 336 ~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~ 415 (831)
..++++|+++||+++.||++.+++||..+.+++|+++ |+++|..... .++..++.++ +.++.+ .. .
T Consensus 187 ~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~----l~i~G~g~~~-~~~~~~~~~~---~~~~~~----~~--~ 252 (372)
T cd03792 187 DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQ----LVLVGSGATD-DPEGWIVYEE---VLEYAE----GD--P 252 (372)
T ss_pred CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCE----EEEEeCCCCC-CchhHHHHHH---HHHHhC----CC--C
Confidence 5688999999999999999999999999988888766 9999964321 1222232222 222211 11 1
Q ss_pred cEEEecCC-CCHHHHHHHHHHcCEeEECCCccCCCC---CCCC-CceEEEeccccccccc---CCCceeCCCCHHHHHHH
Q 044635 416 PVVLIDEP-LKFYERIAYYVVAECCLVTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDA 487 (831)
Q Consensus 416 pv~~~~~~-v~~~el~aly~~ADv~vvtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~a 487 (831)
.|+++... ++.+++.++|++||+|++||.+|||.. +++. +.|+|+|...|..+.+ .+|+++++ .+++|++
T Consensus 253 ~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~~--~~~~a~~ 330 (372)
T cd03792 253 DIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVDT--VEEAAVR 330 (372)
T ss_pred CeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEeCC--cHHHHHH
Confidence 36665543 489999999999999999999999821 2222 4578888888877777 35777764 6789999
Q ss_pred HHHHhcCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHHHH
Q 044635 488 MDSALEMADQEKQLRHEKHYRYV-STHDVGYWARSFLQDLER 528 (831)
Q Consensus 488 i~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 528 (831)
|.+++++ +++++...+..++++ ..+++...++++++.+++
T Consensus 331 i~~ll~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 331 ILYLLRD-PELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHHHHcC-HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 9999975 455556666677776 578999999888876654
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.3e-21 Score=200.65 Aligned_cols=196 Identities=19% Similarity=0.122 Sum_probs=125.4
Q ss_pred eEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-C-ceEEecCCEEEEeCCCce-
Q 044635 575 AILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-N-LGIAAEHGYFFRLRRDEE- 651 (831)
Q Consensus 575 li~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~-~~liaenGa~i~~~~~~~- 651 (831)
+|++|+||||++ .++.++++++++|++|.+ +|+.|+++|||+...+..++..+. . .++||+||+.|+......
T Consensus 1 ~i~~DlDGTLL~---~~~~~~~~~~~~l~~l~~-~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~ 76 (221)
T TIGR02463 1 WVFSDLDGTLLD---SHSYDWQPAAPWLTRLQE-AGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLEELWRE 76 (221)
T ss_pred CEEEeCCCCCcC---CCCCCcHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcCccccc
Confidence 589999999998 555566669999999976 699999999999999999988763 3 579999999998753321
Q ss_pred E---EEcCCcCCccHHHHHHHHHHHHhccCCCee-Eeecc--------ceEEE------eeccCCCccchHHHHHHHHHH
Q 044635 652 W---ETCIPVADCGWKQIAEPVMKLYTETTDGST-IEDKE--------TALVW------SYEDADPDFGSCQAKELLDHL 713 (831)
Q Consensus 652 w---~~~~~~~~~~w~~~v~~il~~~~e~~~gs~-ie~k~--------~~l~~------~~~~~d~~~~~~~a~el~~~L 713 (831)
+ ..... ...| +.+.++++...+.....+ ..... ..+.. ..+....-+......+..+.+
T Consensus 77 ~~~~~~~~~--~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (221)
T TIGR02463 77 EPGYPRIIL--GISY-GIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWRDSDSRMPRF 153 (221)
T ss_pred CCCceEEec--CCCH-HHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEecCchhHHHHH
Confidence 1 00101 1122 335555543322100000 00000 00000 000000000000001222333
Q ss_pred HhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchh
Q 044635 714 ESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISS 780 (831)
Q Consensus 714 ~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~ 780 (831)
.+.+...++.+.++..++||+|++++||.|++++++++ |++++++++|||+.||++||+.++.+
T Consensus 154 ~~~l~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~l---gi~~~~vi~~GD~~NDi~ml~~ag~~ 217 (221)
T TIGR02463 154 TALLADLGLAIVQGNRFSHVLGASSSKGKAANWLKATY---NQPDVKTLGLGDGPNDLPLLEVADYA 217 (221)
T ss_pred HHHHHHcCCeEEecCCeeEEecCCCCHHHHHHHHHHHh---CCCCCcEEEECCCHHHHHHHHhCCce
Confidence 33333334555667789999999999999999999998 99999999999999999999999864
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.4e-19 Score=203.89 Aligned_cols=267 Identities=18% Similarity=0.226 Sum_probs=189.0
Q ss_pred CCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhC
Q 044635 202 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLG 281 (831)
Q Consensus 202 ~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~ 281 (831)
+|+|+||+.. .+-..++++.|++++.+.+|..|. ++.++ .++.|.+.+.. .+.++.. .+
T Consensus 100 ~~vi~v~~~~--~~~~~~~~~~~~~~~v~~~h~~~~-~~~~~-------------~~~~ii~~S~~-~~~~~~~---~~- 158 (380)
T PRK15484 100 DSVIVIHNSM--KLYRQIRERAPQAKLVMHMHNAFE-PELLD-------------KNAKIIVPSQF-LKKFYEE---RL- 158 (380)
T ss_pred CcEEEEeCcH--HhHHHHHhhCCCCCEEEEEecccC-hhHhc-------------cCCEEEEcCHH-HHHHHHh---hC-
Confidence 5999999743 444667888999999999997762 22221 36777776643 3333321 00
Q ss_pred CeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccccCHHHHHHH
Q 044635 282 LTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIFKGISLKLLA 360 (831)
Q Consensus 282 ~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~KGi~~~l~A 360 (831)
...++.++|+|||...|.+. . ...++++++ ..++++|+++||+.+.||+..+++|
T Consensus 159 ----------------~~~~i~vIpngvd~~~~~~~-----~---~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A 214 (380)
T PRK15484 159 ----------------PNADISIVPNGFCLETYQSN-----P---QPNLRQQLNISPDETVLLYAGRISPDKGILLLMQA 214 (380)
T ss_pred ----------------CCCCEEEecCCCCHHHcCCc-----c---hHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHH
Confidence 11246789999998877421 1 124456665 4578999999999999999999999
Q ss_pred HHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeE
Q 044635 361 MEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCL 440 (831)
Q Consensus 361 ~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v 440 (831)
+.++.+++|+++ |+++|.+......+..++++++.+++.+.+. .++ +.+.++.+++..+|+.||++|
T Consensus 215 ~~~l~~~~p~~~----lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~--------~v~-~~G~~~~~~l~~~~~~aDv~v 281 (380)
T PRK15484 215 FEKLATAHSNLK----LVVVGDPTASSKGEKAAYQKKVLEAAKRIGD--------RCI-MLGGQPPEKMHNYYPLADLVV 281 (380)
T ss_pred HHHHHHhCCCeE----EEEEeCCccccccchhHHHHHHHHHHHhcCC--------cEE-EeCCCCHHHHHHHHHhCCEEE
Confidence 999999999876 9999965432222334567777777766431 244 567889999999999999999
Q ss_pred ECCCc-cCCCC---CCCC-CceEEEeccccccccc---CCCc-eeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhh-h
Q 044635 441 VTAVR-DGSEP---SSPK-KSMLVVSEFIGCSPSL---SGAI-RVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRY-V 510 (831)
Q Consensus 441 vtS~~-eGma~---~~~~-~g~lVlSe~~G~~~~l---~~al-lVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~-v 510 (831)
+||.. |||.. +++. +.|+|+|..+|..+.+ .+|+ +++|.|++++|++|.+++++++ +....++.+++ .
T Consensus 282 ~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~--~~~~~~~ar~~~~ 359 (380)
T PRK15484 282 VPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPE--LTQIAEQAKDFVF 359 (380)
T ss_pred eCCCCccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCHH--HHHHHHHHHHHHH
Confidence 99974 88721 3333 4467777776666655 2465 6789999999999999998764 33445566655 4
Q ss_pred ccCCHHHHHHHHHHHHHH
Q 044635 511 STHDVGYWARSFLQDLER 528 (831)
Q Consensus 511 ~~~~~~~W~~~~l~~l~~ 528 (831)
.++++..-++++++.++.
T Consensus 360 ~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 360 SKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred HhCCHHHHHHHHHHHHHH
Confidence 678888888888887764
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.2e-21 Score=215.64 Aligned_cols=230 Identities=17% Similarity=0.233 Sum_probs=149.5
Q ss_pred HhcCceeEEecCCCccCCCCCCCCCCCHHHHHHH-HHHhhcCCCeEEEECCCCHhhHHHHhCCC---CCceEEecCCEEE
Q 044635 569 KRTTTRAILLDYDGTLMPQASIDKSPNSKTIDIL-NSLCRDKNNMVFLVSAKSRKTLAEWFSPC---ENLGIAAEHGYFF 644 (831)
Q Consensus 569 ~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L-~~L~~d~g~~V~I~SGR~~~~l~~~~~~~---~~~~liaenGa~i 644 (831)
..+.+.+|++|+||||++.. .++..+.....++ +++.+ +|..++++|||+...+.++.+.+ .+..+|+.||+.|
T Consensus 5 ~~~~~~lI~sDLDGTLL~~~-~~~~~s~~~~~~l~~~~~~-~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I 82 (413)
T PLN02382 5 SGSPRLMIVSDLDHTMVDHH-DPENLSLLRFNALWEAEYR-HDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEI 82 (413)
T ss_pred cCCCCEEEEEcCCCcCcCCC-CccchhHHHHHHHHHHhhc-CCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEE
Confidence 34567899999999999832 1346675555555 77765 69999999999988777776544 2345788899999
Q ss_pred EeCCCc----eEEEcCCcCCccHHH-HHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcC
Q 044635 645 RLRRDE----EWETCIPVADCGWKQ-IAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLAN 719 (831)
Q Consensus 645 ~~~~~~----~w~~~~~~~~~~w~~-~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~ 719 (831)
+..+.. .|.... +..|.. .+.+.+..|.........+.+...+.+.+.+. .+.++...+.+.+..
T Consensus 83 ~~~~~~~~d~~w~~~l---~~~w~~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~-------~~~~~~~~l~~~~~~ 152 (413)
T PLN02382 83 AYGESMVPDHGWVEYL---NKKWDREIVVEETSKFPELKLQPETEQRPHKVSFYVDKK-------KAQEVIKELSERLEK 152 (413)
T ss_pred EeCCCCccChhHHHHH---hccCChhhHHHHHhcCCCcccCCcccCCCeEEEEEechH-------HhHHHHHHHHHHHHh
Confidence 865321 121111 123322 12222222211111222233334444443321 233445555554432
Q ss_pred C--Ce-EEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEE
Q 044635 720 E--PV-TVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACT 796 (831)
Q Consensus 720 ~--~v-~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~ 796 (831)
. .+ .+.++..++||+|+++|||.|+++|++++...|++++++++|||+.||++||+.++. ++|+
T Consensus 153 ~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~-------------~gva 219 (413)
T PLN02382 153 RGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDV-------------YGVM 219 (413)
T ss_pred cCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCC-------------CEEE
Confidence 2 23 346788999999999999999999999986668999999999999999999999872 3678
Q ss_pred eCCCC----c--------ccceEe---CChhHHHHHHHHHHh
Q 044635 797 VGRKP----S--------KAKYYL---DDTVEIVRLMQGLAC 823 (831)
Q Consensus 797 vG~~~----s--------~A~y~l---~d~~eV~~~L~~L~~ 823 (831)
|||+. . .|++++ ++.+++.+.|+.+.-
T Consensus 220 m~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~f~l 261 (413)
T PLN02382 220 VSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGHFNL 261 (413)
T ss_pred EcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHHhCC
Confidence 88762 1 235553 358999999998763
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.6e-20 Score=193.04 Aligned_cols=211 Identities=18% Similarity=0.156 Sum_probs=138.6
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC-CC--ceEEecCCEEEEeCC
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC-EN--LGIAAEHGYFFRLRR 648 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~-~~--~~liaenGa~i~~~~ 648 (831)
.++++++|+||||++ .++.+++++.++|++|.+ ++.|+++|||+...+.+.+... .. .++|++||+++...+
T Consensus 6 ~~~i~~~D~DGTLl~---~~~~i~~~~~~ai~~l~~--~i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~~g 80 (245)
T PLN02423 6 PGVIALFDVDGTLTA---PRKEATPEMLEFMKELRK--VVTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHKDG 80 (245)
T ss_pred cceEEEEeccCCCcC---CCCcCCHHHHHHHHHHHh--CCEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEeCC
Confidence 455777999999998 778899999999999985 4999999999999998888764 21 478999999998544
Q ss_pred CceEEEcCCc-CCccHHHHHHHHHHHHhc--------cCCCeeEeeccceEEEe--eccCCCc---------cchHHHHH
Q 044635 649 DEEWETCIPV-ADCGWKQIAEPVMKLYTE--------TTDGSTIEDKETALVWS--YEDADPD---------FGSCQAKE 708 (831)
Q Consensus 649 ~~~w~~~~~~-~~~~w~~~v~~il~~~~e--------~~~gs~ie~k~~~l~~~--~~~~d~~---------~~~~~a~e 708 (831)
...+...+.. .+ .+.+.++++...+ ...+.+++..+...... +.++... .......+
T Consensus 81 ~~i~~~~l~~~l~---~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~ 157 (245)
T PLN02423 81 KLIGTQSLKSFLG---EDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPK 157 (245)
T ss_pred EEEEEecccccCC---HHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhCccchHHHH
Confidence 3222221111 11 1334444433221 12244555433222111 1111000 01122344
Q ss_pred HHHHHHhHhcCCCeE-EEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcC----CchhHHHHHHcchhcCC
Q 044635 709 LLDHLESVLANEPVT-VKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGD----DRSDEDMFEVIISSMAG 783 (831)
Q Consensus 709 l~~~L~~~l~~~~v~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD----~~NDe~Mf~~a~~~~~~ 783 (831)
+...+.+.+.+..+. ..+|..++||+|+|+|||.|++.|+ +++++++||| +.||++||+.-+-
T Consensus 158 ~~~~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~--------~~~e~~aFGD~~~~~~ND~eMl~~~~~---- 225 (245)
T PLN02423 158 MVSVLREKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE--------DFDEIHFFGDKTYEGGNDHEIFESERT---- 225 (245)
T ss_pred HHHHHHHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc--------CcCeEEEEeccCCCCCCcHHHHhCCCc----
Confidence 555565655442333 3345689999999999999999997 5799999999 8999999997542
Q ss_pred CCCCCCCceEEEEeCCCCcccceEeCChhHHHHHHHHHH
Q 044635 784 PSIAPRAEVFACTVGRKPSKAKYYLDDTVEIVRLMQGLA 822 (831)
Q Consensus 784 ~~~~~~~~~~~v~vG~~~s~A~y~l~d~~eV~~~L~~L~ 822 (831)
.+.+ +.++++..++|++|.
T Consensus 226 ---------~~~~-----------~~~~~~~~~~~~~~~ 244 (245)
T PLN02423 226 ---------IGHT-----------VTSPDDTREQCTALF 244 (245)
T ss_pred ---------ceEE-----------eCCHHHHHHHHHHhc
Confidence 3444 378999999888763
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.6e-19 Score=209.83 Aligned_cols=316 Identities=14% Similarity=0.146 Sum_probs=207.7
Q ss_pred HHHHHHHHHHHHHHHHHH-cCCCCCEEEEeCccccchHHHHHhh-----cCCCeEEEEEecc-----CCChHHhhc--CC
Q 044635 180 WQAYVSVNKIFADRIMEV-INPEDDFVWVHDYHLMVLPTFLRKR-----FNRVKLGFFLHSP-----FPSSEIYKT--LP 246 (831)
Q Consensus 180 w~~Y~~vN~~fa~~i~~~-~~~~~d~vwvhDyhL~llp~~lr~~-----~~~~~i~~flH~P-----fP~~e~f~~--lp 246 (831)
...|.-+.+..++.+... ..| |+|.+||||-.++|.++.+. +.++++.|++|-= ||... +.. +|
T Consensus 590 ~~RF~~FsrAaLe~~~~~~~~P--DIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~-l~~lGL~ 666 (977)
T PLN02939 590 FKRFSYFSRAALELLYQSGKKP--DIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASD-LASCGLD 666 (977)
T ss_pred HHHHHHHHHHHHHHHHhcCCCC--CEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHH-HHHcCCC
Confidence 344555555555544432 344 89999999999985554432 4568999999953 33211 111 22
Q ss_pred C---------------hHHH-HHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccC
Q 044635 247 I---------------REEI-LRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIH 310 (831)
Q Consensus 247 ~---------------r~ei-l~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId 310 (831)
+ +-.+ --|+..||.|..-++.|++.-+. ..--|++. .+..+..++.++|+|||
T Consensus 667 ~~~l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t--e~G~GL~~---------~L~~~~~Kl~gIlNGID 735 (977)
T PLN02939 667 VHQLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS--EGGRGLQD---------TLKFHSKKFVGILNGID 735 (977)
T ss_pred HHHccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH--HhccchHH---------HhccccCCceEEeccee
Confidence 1 1112 24677799999889999887654 10001110 12234567889999999
Q ss_pred hHHHHHhhCC-------c----chHHHHHHHHHHhc-c---CCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcE
Q 044635 311 MGQLQSVLSL-------P----GTEAKVSELIKQFH-D---QGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKV 375 (831)
Q Consensus 311 ~~~~~~~~~~-------~----~~~~~~~~lr~~~~-~---~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~v 375 (831)
.+.|.+.... . .-......+++++| + .+.++|++|||+++.||+..+++|+.++++ ++ +
T Consensus 736 ~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~d----v 809 (977)
T PLN02939 736 TDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LG----G 809 (977)
T ss_pred hhhcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cC----C
Confidence 9988643210 0 00123457888997 4 256899999999999999999999998875 33 3
Q ss_pred EEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCCC---CC
Q 044635 376 VLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEP---SS 452 (831)
Q Consensus 376 vLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~---~~ 452 (831)
.||++|. |++ ..+++++..++.+.+. .+ .|.+ .+.++......+|++||+||+||.+|||.. ++
T Consensus 810 qLVIvGd-----Gp~-~~~e~eL~~La~~l~l----~d--rV~F-lG~~de~lah~IYAaADIFLmPSr~EPfGLvqLEA 876 (977)
T PLN02939 810 QFVLLGS-----SPV-PHIQREFEGIADQFQS----NN--NIRL-ILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIA 876 (977)
T ss_pred EEEEEeC-----CCc-HHHHHHHHHHHHHcCC----CC--eEEE-EeccCHHHHHHHHHhCCEEEECCCccCCcHHHHHH
Confidence 4888883 322 2345666777666432 11 2444 456777777899999999999999998832 33
Q ss_pred CCCc-eEEEeccccccccc------------CCCceeCCCCHHHHHHHHHHHhc---CCHHHHHHHHHHHhhhhccCCHH
Q 044635 453 PKKS-MLVVSEFIGCSPSL------------SGAIRVNPWNIDAVSDAMDSALE---MADQEKQLRHEKHYRYVSTHDVG 516 (831)
Q Consensus 453 ~~~g-~lVlSe~~G~~~~l------------~~allVnP~d~~~~A~ai~~aL~---m~~~er~~r~~~~~~~v~~~~~~ 516 (831)
+..| |+|++..+|..+.+ .+|++|+|.|+++++++|.+++. ..++.++...++. ....+++.
T Consensus 877 MAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~a--m~~dFSWe 954 (977)
T PLN02939 877 MRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKD--MNIDFSWD 954 (977)
T ss_pred HHCCCCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHH--HHhcCCHH
Confidence 3344 88999988887655 25899999999999999999986 2333333322222 23678889
Q ss_pred HHHHHHHHHHHHHH
Q 044635 517 YWARSFLQDLERTC 530 (831)
Q Consensus 517 ~W~~~~l~~l~~~~ 530 (831)
..++.+++-..++.
T Consensus 955 ~~A~qYeeLY~~ll 968 (977)
T PLN02939 955 SSASQYEELYQRAV 968 (977)
T ss_pred HHHHHHHHHHHHHH
Confidence 88988876666554
|
|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.7e-19 Score=216.27 Aligned_cols=307 Identities=12% Similarity=0.113 Sum_probs=210.8
Q ss_pred hhHHHHHHHHHHHHHHHHHH-cCCCCCEEEEeCccccchHHHHHhh-----cCCCeEEEEEeccCCChHHhhcCCChHHH
Q 044635 178 SLWQAYVSVNKIFADRIMEV-INPEDDFVWVHDYHLMVLPTFLRKR-----FNRVKLGFFLHSPFPSSEIYKTLPIREEI 251 (831)
Q Consensus 178 ~~w~~Y~~vN~~fa~~i~~~-~~~~~d~vwvhDyhL~llp~~lr~~-----~~~~~i~~flH~PfP~~e~f~~lp~r~ei 251 (831)
+....|.-+++..++.+.+. +.| |+|.+||+|-.++|.++++. +.++|+.+++|-.- | .+..+
T Consensus 687 Dd~~RF~~F~~Aale~l~~~~~~P--DIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~-----~----~~n~l 755 (1036)
T PLN02316 687 NDGERFGFFCHAALEFLLQSGFHP--DIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLE-----F----GANHI 755 (1036)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCC--CEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCcc-----c----chhHH
Confidence 33455666666666655433 234 89999999999999999875 35689999999531 1 11234
Q ss_pred HHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCC--c-----c--
Q 044635 252 LRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSL--P-----G-- 322 (831)
Q Consensus 252 l~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~--~-----~-- 322 (831)
-.++..||.|.--++.|++..+.. + .+ ..+..++.++|+|||++.|.+.... | .
T Consensus 756 k~~l~~AD~ViTVS~tya~EI~~~-----~----------~l--~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~ 818 (1036)
T PLN02316 756 GKAMAYADKATTVSPTYSREVSGN-----S----------AI--APHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENV 818 (1036)
T ss_pred HHHHHHCCEEEeCCHHHHHHHHhc-----c----------Cc--ccccCCEEEEECCccccccCCcccccccccCCchhh
Confidence 467788999999899888766531 0 00 1124577899999999887543110 0 0
Q ss_pred ---hHHHHHHHHHHhc-c-CCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHH
Q 044635 323 ---TEAKVSELIKQFH-D-QGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAE 397 (831)
Q Consensus 323 ---~~~~~~~lr~~~~-~-~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~ 397 (831)
-......+++++| + .+.++|++||||++.||+..+++|+.++++. + +.||++|. |++ ..++.+
T Consensus 819 ~~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~--~----~qlVIvG~-----Gpd-~~~e~~ 886 (1036)
T PLN02316 819 VEGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER--N----GQVVLLGS-----APD-PRIQND 886 (1036)
T ss_pred hhhhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc--C----cEEEEEeC-----CCC-HHHHHH
Confidence 0123456888887 4 3678999999999999999999999999863 3 34777883 333 245677
Q ss_pred HHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCC---CCCCCCc-eEEEeccccccccc-C-
Q 044635 398 TYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSE---PSSPKKS-MLVVSEFIGCSPSL-S- 471 (831)
Q Consensus 398 i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma---~~~~~~g-~lVlSe~~G~~~~l-~- 471 (831)
+.+++.++...+.. .|.+.. ..+......+|++||+||+||.+||+. .++++.| |+|++..+|..+.+ .
T Consensus 887 l~~La~~Lg~~~~~----rV~f~g-~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~ 961 (1036)
T PLN02316 887 FVNLANQLHSSHHD----RARLCL-TYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDV 961 (1036)
T ss_pred HHHHHHHhCccCCC----eEEEEe-cCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhcccc
Confidence 88888776544321 244433 344444457999999999999999883 2444455 89999988888776 2
Q ss_pred --------------CCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHHHHH
Q 044635 472 --------------GAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYV-STHDVGYWARSFLQDLERT 529 (831)
Q Consensus 472 --------------~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~ 529 (831)
+|++|+|.|+++++++|.++|......+....+..++.+ ..+++..-++++++-..++
T Consensus 962 d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a 1034 (1036)
T PLN02316 962 DHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSA 1034 (1036)
T ss_pred ccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 589999999999999999999864332222233333333 5578888888777665554
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.2e-19 Score=206.34 Aligned_cols=292 Identities=19% Similarity=0.208 Sum_probs=189.5
Q ss_pred CCEEEEeCccccchHHHHHhhc----CCCeEEEEEeccCC----ChHHhhcC--CC-------------hHHHHHHHhcC
Q 044635 202 DDFVWVHDYHLMVLPTFLRKRF----NRVKLGFFLHSPFP----SSEIYKTL--PI-------------REEILRALLNS 258 (831)
Q Consensus 202 ~d~vwvhDyhL~llp~~lr~~~----~~~~i~~flH~PfP----~~e~f~~l--p~-------------r~eil~~ll~~ 258 (831)
-|+|.+||||-.++|.+++++. .++|+.++.|..-. ..+.+..+ |+ ..-+-.++..|
T Consensus 119 pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 198 (466)
T PRK00654 119 PDIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYA 198 (466)
T ss_pred CceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhc
Confidence 3999999999999999998663 46899999997521 11111111 11 01122355667
Q ss_pred CeEeecCHHhHHHHHHHHHHHhCCeecccCceeeE--EEcCEEEEEEEeecccChHHHHHhhCC-----------cchHH
Q 044635 259 DLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGL--EYYGRTVSIKILPVGIHMGQLQSVLSL-----------PGTEA 325 (831)
Q Consensus 259 dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~--~~~gr~~~i~v~P~GId~~~~~~~~~~-----------~~~~~ 325 (831)
|.|...++.|++..... ..|. ++ .+..+..++.++|+|||.+.|.+.... .....
T Consensus 199 d~vitvS~~~~~ei~~~---~~~~---------gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~ 266 (466)
T PRK00654 199 DRVTTVSPTYAREITTP---EFGY---------GLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAE 266 (466)
T ss_pred CcCeeeCHHHHHHhccc---cCCc---------ChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHH
Confidence 77666666665543210 0000 00 011234478899999999988643110 01122
Q ss_pred HHHHHHHHhc-c-CCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHH
Q 044635 326 KVSELIKQFH-D-QGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVE 403 (831)
Q Consensus 326 ~~~~lr~~~~-~-~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~ 403 (831)
..+.++++++ + .+.++|++|||+++.||++.+++|+++++++ + +.|+++|.+ + ..+++++++++.
T Consensus 267 ~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~----~~lvivG~g-----~--~~~~~~l~~l~~ 333 (466)
T PRK00654 267 NKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--G----GQLVLLGTG-----D--PELEEAFRALAA 333 (466)
T ss_pred HHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc--C----CEEEEEecC-----c--HHHHHHHHHHHH
Confidence 3456788887 3 3678999999999999999999999998764 3 348888832 2 134556666665
Q ss_pred HHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCCC---CCCC-CceEEEeccccccccc---------
Q 044635 404 RINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSL--------- 470 (831)
Q Consensus 404 ~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l--------- 470 (831)
+.+. .++++.+. +.+....+|+.||++|+||.+||++. +++. +.|+|+|...|..+.+
T Consensus 334 ~~~~--------~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~ 404 (466)
T PRK00654 334 RYPG--------KVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGE 404 (466)
T ss_pred HCCC--------cEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCC
Confidence 5421 25555543 56667899999999999999999821 2333 4588999988888877
Q ss_pred CCCceeCCCCHHHHHHHHHHHhcCC--HHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHH
Q 044635 471 SGAIRVNPWNIDAVSDAMDSALEMA--DQEKQLRHEKHYRYVSTHDVGYWARSFLQDLERT 529 (831)
Q Consensus 471 ~~allVnP~d~~~~A~ai~~aL~m~--~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 529 (831)
.+|++|+|.|+++++++|.++|... ++.++...++.. ...+++..-++++++-.+++
T Consensus 405 ~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~lY~~~ 463 (466)
T PRK00654 405 ATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM--AQDFSWDKSAEEYLELYRRL 463 (466)
T ss_pred CceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCChHHHHHHHHHHHHHH
Confidence 3489999999999999999998632 222222222222 25677777777776655543
|
|
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.9e-19 Score=204.39 Aligned_cols=317 Identities=14% Similarity=0.148 Sum_probs=207.9
Q ss_pred hhHHHHHHHHHHHHHHHHHH-cCCCCCEEEEeCccccchHHHHHhhc------CCCeEEEEEeccC-----CChHHhhcC
Q 044635 178 SLWQAYVSVNKIFADRIMEV-INPEDDFVWVHDYHLMVLPTFLRKRF------NRVKLGFFLHSPF-----PSSEIYKTL 245 (831)
Q Consensus 178 ~~w~~Y~~vN~~fa~~i~~~-~~~~~d~vwvhDyhL~llp~~lr~~~------~~~~i~~flH~Pf-----P~~e~f~~l 245 (831)
+....|.-+++..++.+.+. ++| |+|.+||||-.++|.+++++. .++|+.++.|... |...+-..+
T Consensus 119 d~~~rf~~f~~a~l~~~~~~~~~p--DiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~ 196 (489)
T PRK14098 119 GSAEKVIFFNVGVLETLQRLGWKP--DIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLL 196 (489)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCCC--CEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhC
Confidence 44567777777777766542 344 899999999999999998754 4789999999742 221111113
Q ss_pred CCh------------HHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHH
Q 044635 246 PIR------------EEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQ 313 (831)
Q Consensus 246 p~r------------~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~ 313 (831)
|+. .-+-.++..||.|---++.|++.-++....-.|++. ....+..++.++|+|||.+.
T Consensus 197 ~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~---------~l~~~~~kl~~I~NGID~~~ 267 (489)
T PRK14098 197 PEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDK---------VLEERKMRLHGILNGIDTRQ 267 (489)
T ss_pred CHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHH---------HHHhcCCCeeEEeCCccccc
Confidence 321 123346677888877777777654320000001100 00113457889999999998
Q ss_pred HHHhhCCc-----------chHHHHHHHHHHhc-c--CCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 044635 314 LQSVLSLP-----------GTEAKVSELIKQFH-D--QGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQ 379 (831)
Q Consensus 314 ~~~~~~~~-----------~~~~~~~~lr~~~~-~--~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvq 379 (831)
|.+..... ........++++++ + +++++|++|||+++.||++.+++|+.++++. + +.|++
T Consensus 268 ~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~--~----~~lvi 341 (489)
T PRK14098 268 WNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL--D----IQLVI 341 (489)
T ss_pred cCCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc--C----cEEEE
Confidence 86432110 00123456777776 3 3578999999999999999999999998752 3 44888
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCCC---CCCCCc
Q 044635 380 IANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEP---SSPKKS 456 (831)
Q Consensus 380 ig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~---~~~~~g 456 (831)
+|. |+. .+++++++++.+. +. .|.+ .+.++.+++..+|++||+||+||..||++. +++..|
T Consensus 342 vG~-----G~~--~~~~~l~~l~~~~----~~----~V~~-~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G 405 (489)
T PRK14098 342 CGS-----GDK--EYEKRFQDFAEEH----PE----QVSV-QTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYG 405 (489)
T ss_pred EeC-----CCH--HHHHHHHHHHHHC----CC----CEEE-EEecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCC
Confidence 884 221 2456666666553 11 2444 456889999999999999999999999722 334444
Q ss_pred -eEEEeccccccccc-------CCCceeCCCCHHHHHHHHHHHhcC--CHHHHHHHHHHHhhhhccCCHHHHHHHHHHHH
Q 044635 457 -MLVVSEFIGCSPSL-------SGAIRVNPWNIDAVSDAMDSALEM--ADQEKQLRHEKHYRYVSTHDVGYWARSFLQDL 526 (831)
Q Consensus 457 -~lVlSe~~G~~~~l-------~~allVnP~d~~~~A~ai~~aL~m--~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 526 (831)
++|++...|..+.+ .+|++|+|.|++++|++|.+++.+ .++.++...++. ....+++..-++++++-.
T Consensus 406 ~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~--~~~~fsw~~~a~~y~~lY 483 (489)
T PRK14098 406 TIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLEA--MERDFSWKNSAEEYAQLY 483 (489)
T ss_pred CCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHH--hcCCCChHHHHHHHHHHH
Confidence 78888888887766 268999999999999999998743 222222211111 235678777777776655
Q ss_pred HHH
Q 044635 527 ERT 529 (831)
Q Consensus 527 ~~~ 529 (831)
+++
T Consensus 484 ~~~ 486 (489)
T PRK14098 484 REL 486 (489)
T ss_pred HHH
Confidence 543
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.4e-18 Score=195.23 Aligned_cols=285 Identities=14% Similarity=0.108 Sum_probs=197.7
Q ss_pred CCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhc---CCC--hHHHH--HHHhcCCeEeecCHHhHHHHHH
Q 044635 202 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKT---LPI--REEIL--RALLNSDLIGFHTFDYARHFLS 274 (831)
Q Consensus 202 ~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~---lp~--r~eil--~~ll~~dligf~t~~~~~~Fl~ 274 (831)
.|+|.+|++...+++.++++ ..++|+.+.+|..++-...+.. .|. ...++ ..+-.+|.+.+.+...++.+..
T Consensus 102 ~Diih~h~~~~~~~~~~~~~-~~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~ 180 (405)
T TIGR03449 102 YDLIHSHYWLSGQVGWLLRD-RWGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDLVR 180 (405)
T ss_pred CCeEEechHHHHHHHHHHHH-hcCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHHHH
Confidence 48999998666555556554 3468899999965432221111 121 11221 2345689999999988877754
Q ss_pred HHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccccC
Q 044635 275 CCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIFKG 353 (831)
Q Consensus 275 ~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~KG 353 (831)
. .+ ....++.++|+|||.+.|.+. + ....+++++ ..++++|+++||+.+.||
T Consensus 181 ~----~~---------------~~~~ki~vi~ngvd~~~~~~~---~-----~~~~~~~~~~~~~~~~i~~~G~l~~~K~ 233 (405)
T TIGR03449 181 H----YD---------------ADPDRIDVVAPGADLERFRPG---D-----RATERARLGLPLDTKVVAFVGRIQPLKA 233 (405)
T ss_pred H----cC---------------CChhhEEEECCCcCHHHcCCC---c-----HHHHHHhcCCCCCCcEEEEecCCCcccC
Confidence 1 11 123467889999999887421 1 123456665 457889999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCc-hhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHH
Q 044635 354 ISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRG-KDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAY 432 (831)
Q Consensus 354 i~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~-~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~al 432 (831)
+..+++|++++++++|+. ++.|+++|.+.. ++ +.. +++++++++.+ ..+.+.+.|.++.+++..+
T Consensus 234 ~~~li~a~~~l~~~~~~~--~~~l~ivG~~~~-~g~~~~----~~l~~~~~~~~-------l~~~v~~~g~~~~~~~~~~ 299 (405)
T TIGR03449 234 PDVLLRAVAELLDRDPDR--NLRVIVVGGPSG-SGLATP----DALIELAAELG-------IADRVRFLPPRPPEELVHV 299 (405)
T ss_pred HHHHHHHHHHHHhhCCCc--ceEEEEEeCCCC-CcchHH----HHHHHHHHHcC-------CCceEEECCCCCHHHHHHH
Confidence 999999999999998872 467999996532 23 333 33444444432 2334556778999999999
Q ss_pred HHHcCEeEECCCccCCCC---CCCC-CceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHH
Q 044635 433 YVVAECCLVTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEK 505 (831)
Q Consensus 433 y~~ADv~vvtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~ 505 (831)
|+.||++++||..||++. +++. +.|+|+|...|..+.+ ..|++++|.|++++|++|.++++. ++++....+.
T Consensus 300 l~~ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~-~~~~~~~~~~ 378 (405)
T TIGR03449 300 YRAADVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDD-PRTRIRMGAA 378 (405)
T ss_pred HHhCCEEEECCCCCCcChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhC-HHHHHHHHHH
Confidence 999999999999998821 2222 4577777777766666 357999999999999999999974 3445555556
Q ss_pred HhhhhccCCHHHHHHHHHHHHHHH
Q 044635 506 HYRYVSTHDVGYWARSFLQDLERT 529 (831)
Q Consensus 506 ~~~~v~~~~~~~W~~~~l~~l~~~ 529 (831)
.++.+..+++...++++++-+.++
T Consensus 379 ~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 379 AVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHH
Confidence 677778889888888887766543
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.5e-19 Score=205.19 Aligned_cols=199 Identities=18% Similarity=0.113 Sum_probs=132.2
Q ss_pred cCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCCC
Q 044635 571 TTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRRD 649 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~~ 649 (831)
.++|+|++|+||||++ .++..+++++++|++|.+ .|+.|++||||+...+..++..+. ..++|++||+.|+.+++
T Consensus 414 ~~~KLIfsDLDGTLLd---~d~~i~~~t~eAL~~L~e-kGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~~~ 489 (694)
T PRK14502 414 QFKKIVYTDLDGTLLN---PLTYSYSTALDALRLLKD-KELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIPKD 489 (694)
T ss_pred ceeeEEEEECcCCCcC---CCCccCHHHHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEECCC
Confidence 3689999999999999 566677899999999987 599999999999999998887763 45899999999998754
Q ss_pred -------------ceEEEcCCcCCccHHHHHHHHHHHHhccCC----------CeeEeeccceEEEe----ecc------
Q 044635 650 -------------EEWETCIPVADCGWKQIAEPVMKLYTETTD----------GSTIEDKETALVWS----YED------ 696 (831)
Q Consensus 650 -------------~~w~~~~~~~~~~w~~~v~~il~~~~e~~~----------gs~ie~k~~~l~~~----~~~------ 696 (831)
..+.... ..+ .+.+.++++...+... ..++.... ...+. +..
T Consensus 490 ~~~~~~~~~~~~~~~iI~~~-~l~---~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~-d~~~~ei~~~TgL~~~~a 564 (694)
T PRK14502 490 YFRLPFAYDRVAGNYLVIEL-GMA---YKDIRHILKKALAEACTEIENSEKAGNIFITSFG-DMSVEDVSRLTDLNLKQA 564 (694)
T ss_pred cccccccccccCCCeEEEEc-CCC---HHHHHHHHHHHHHhhcceeeeeeccCcEEEecCC-cccHHHHHHhhCCCHHHH
Confidence 1111111 111 2344455544433111 11111100 00000 000
Q ss_pred --CC------CccchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEE--cC
Q 044635 697 --AD------PDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCV--GD 766 (831)
Q Consensus 697 --~d------~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~--GD 766 (831)
+. +-+... ..+.++.+.+.+....+.+..+..++||. +++|||.|+++|++.+ +++.+++++| ||
T Consensus 565 ~~a~~Re~seKIl~~g-d~e~Leel~~~L~~~~l~v~~g~rfleI~-~gvdKG~AL~~L~e~~---gI~~~eViafalGD 639 (694)
T PRK14502 565 ELAKQREYSETVHIEG-DKRSTNIVLNHIQQSGLEYSFGGRFYEVT-GGNDKGKAIKILNELF---RLNFGNIHTFGLGD 639 (694)
T ss_pred HHHhhccCceeEEEcC-CHHHHHHHHHHHHHcCcEEEECCEEEEeC-CCCCHHHHHHHHHHHh---CCCccceEEEEcCC
Confidence 00 000000 01233444444444356677799999999 5999999999999998 8888999999 99
Q ss_pred CchhHHHHHHcchhcCC
Q 044635 767 DRSDEDMFEVIISSMAG 783 (831)
Q Consensus 767 ~~NDe~Mf~~a~~~~~~ 783 (831)
+.||++||++++.+++|
T Consensus 640 s~NDisMLe~Ag~gVAM 656 (694)
T PRK14502 640 SENDYSMLETVDSPILV 656 (694)
T ss_pred cHhhHHHHHhCCceEEE
Confidence 99999999999965443
|
|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.4e-18 Score=201.62 Aligned_cols=309 Identities=16% Similarity=0.188 Sum_probs=199.9
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHHHhhcC--CCeEEEEEeccCC----ChHHhhcCCChH------
Q 044635 182 AYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFN--RVKLGFFLHSPFP----SSEIYKTLPIRE------ 249 (831)
Q Consensus 182 ~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~--~~~i~~flH~PfP----~~e~f~~lp~r~------ 249 (831)
.|..+++..++.+... ...-|+|.+||+|-.++|.++++... ++|+.++.|...+ +.+.+..++...
T Consensus 110 r~~~f~~a~~~~~~~~-~~~~DiiH~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~ 188 (473)
T TIGR02095 110 RFAFFSRAAAELLSGL-GWQPDVVHAHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHME 188 (473)
T ss_pred HHHHHHHHHHHHHHhc-CCCCCEEEECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCch
Confidence 3444444444444332 11238999999999999999988765 3899999997643 122222222110
Q ss_pred ---------HHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEE--EcCEEEEEEEeecccChHHHHHhh
Q 044635 250 ---------EILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLE--YYGRTVSIKILPVGIHMGQLQSVL 318 (831)
Q Consensus 250 ---------eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~--~~gr~~~i~v~P~GId~~~~~~~~ 318 (831)
-+-.++..||.|-.-++.|++..... ..|. +++ +..+..++.++|+|||.+.|.+..
T Consensus 189 ~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~---~~~~---------~l~~~l~~~~~ki~~I~NGid~~~~~p~~ 256 (473)
T TIGR02095 189 GLEFYGRVNFLKGGIVYADRVTTVSPTYAREILTP---EFGY---------GLDGVLKARSGKLRGILNGIDTEVWNPAT 256 (473)
T ss_pred hhhcCCchHHHHHHHHhCCcCeecCHhHHHHhcCC---cCCc---------cchhHHHhcCCCeEEEeCCCCccccCCCC
Confidence 12335666777777676666554321 0000 010 011345788999999999886421
Q ss_pred CCc-----------chHHHHHHHHHHhc-cC--CcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCC
Q 044635 319 SLP-----------GTEAKVSELIKQFH-DQ--GKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPA 384 (831)
Q Consensus 319 ~~~-----------~~~~~~~~lr~~~~-~~--~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~ 384 (831)
... .-......++++++ +. ++++|+++||+.+.||++.+++|++++.++. +.|+++|..
T Consensus 257 ~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g- 329 (473)
T TIGR02095 257 DPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELG------GQLVVLGTG- 329 (473)
T ss_pred CcccccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcC------cEEEEECCC-
Confidence 100 01123456788887 43 6889999999999999999999999987642 448888842
Q ss_pred CCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCC---CCCCC-CceEEE
Q 044635 385 RGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSE---PSSPK-KSMLVV 460 (831)
Q Consensus 385 r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma---~~~~~-~g~lVl 460 (831)
+ .++++++.+++.+. +. .+.++. ..+.+++..+|+.||++++||..||+. .+++. +.|+|+
T Consensus 330 ----~--~~~~~~l~~~~~~~----~~----~v~~~~-~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~ 394 (473)
T TIGR02095 330 ----D--PELEEALRELAERY----PG----NVRVII-GYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIV 394 (473)
T ss_pred ----C--HHHHHHHHHHHHHC----CC----cEEEEE-cCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEE
Confidence 2 23456666666542 21 244443 467888899999999999999999882 12222 458999
Q ss_pred eccccccccc---------CCCceeCCCCHHHHHHHHHHHhcC---CHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHH
Q 044635 461 SEFIGCSPSL---------SGAIRVNPWNIDAVSDAMDSALEM---ADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLE 527 (831)
Q Consensus 461 Se~~G~~~~l---------~~allVnP~d~~~~A~ai~~aL~m---~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 527 (831)
|...|..+.+ .+|++++|.|++++|++|.++|.+ .++.++...++.. ...+++...++++++-.+
T Consensus 395 s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~Y~ 471 (473)
T TIGR02095 395 RRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAM--SQDFSWDKSAKQYVELYR 471 (473)
T ss_pred ccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCCcHHHHHHHHHHHH
Confidence 9998888877 247999999999999999999873 2233332222222 256788887777765443
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.2e-18 Score=201.70 Aligned_cols=290 Identities=18% Similarity=0.179 Sum_probs=186.2
Q ss_pred CEEEEeCccccchHHHHHhh-cCCCeEEEEEecc-----CCChHHhhc--CCCh-------------HHHHHHHhcCCeE
Q 044635 203 DFVWVHDYHLMVLPTFLRKR-FNRVKLGFFLHSP-----FPSSEIYKT--LPIR-------------EEILRALLNSDLI 261 (831)
Q Consensus 203 d~vwvhDyhL~llp~~lr~~-~~~~~i~~flH~P-----fP~~e~f~~--lp~r-------------~eil~~ll~~dli 261 (831)
|+|.+||||-.++|.+++.+ ..++++.++.|.. ||. +.+.. +|.. .-+-.++..||.|
T Consensus 135 DIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~v 213 (485)
T PRK14099 135 DIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRI 213 (485)
T ss_pred CEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCee
Confidence 89999999999999998753 3467899999964 322 11111 1110 0133445566666
Q ss_pred eecCHHhHHHHHHHHHHHhCCeecccCceeeEE--EcCEEEEEEEeecccChHHHHHhhCCc-----c------hHHHHH
Q 044635 262 GFHTFDYARHFLSCCSRMLGLTYESKRGYIGLE--YYGRTVSIKILPVGIHMGQLQSVLSLP-----G------TEAKVS 328 (831)
Q Consensus 262 gf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~--~~gr~~~i~v~P~GId~~~~~~~~~~~-----~------~~~~~~ 328 (831)
---++.|++.....- .| .+++ +..+..++.++|+|||.+.|.+..... . .....+
T Consensus 214 itVS~~~a~ei~~~~---~g---------~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~ 281 (485)
T PRK14099 214 TTVSPTYALEIQGPE---AG---------MGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKA 281 (485)
T ss_pred eecChhHHHHHhccc---CC---------cChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHH
Confidence 655665555433200 00 0000 011345788999999999886532110 0 011235
Q ss_pred HHHHHhc-cC--CcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHH
Q 044635 329 ELIKQFH-DQ--GKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERI 405 (831)
Q Consensus 329 ~lr~~~~-~~--~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~I 405 (831)
.++++++ +. +.++|++|||+++.||++.+++|+.+++++ + +.|+++|. |+ .++++++++++.+.
T Consensus 282 ~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~--~----~~lvivG~-----G~--~~~~~~l~~l~~~~ 348 (485)
T PRK14099 282 ALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE--G----AQLALLGS-----GD--AELEARFRAAAQAY 348 (485)
T ss_pred HHHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc--C----cEEEEEec-----CC--HHHHHHHHHHHHHC
Confidence 6778887 32 467888999999999999999999998753 3 34888884 22 23455666665542
Q ss_pred hccCCCCCCccEEEecCCCCHHHHHHHH-HHcCEeEECCCccCCC---CCCCCCc-eEEEeccccccccc----------
Q 044635 406 NQTFGKPGYDPVVLIDEPLKFYERIAYY-VVAECCLVTAVRDGSE---PSSPKKS-MLVVSEFIGCSPSL---------- 470 (831)
Q Consensus 406 N~~~g~~~~~pv~~~~~~v~~~el~aly-~~ADv~vvtS~~eGma---~~~~~~g-~lVlSe~~G~~~~l---------- 470 (831)
+. .++++.+. .+++..+| +.||+||+||.+||++ .+++..| ++|+|..+|..+.+
T Consensus 349 ----~~----~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~ 418 (485)
T PRK14099 349 ----PG----QIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIAT 418 (485)
T ss_pred ----CC----CEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeeccccccccc
Confidence 21 25455554 67888887 4699999999999983 2444455 88889888887766
Q ss_pred --CCCceeCCCCHHHHHHHHHHHhc--CCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHH
Q 044635 471 --SGAIRVNPWNIDAVSDAMDSALE--MADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTC 530 (831)
Q Consensus 471 --~~allVnP~d~~~~A~ai~~aL~--m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 530 (831)
.+|++|+|.|++++|++|.+++. ..++.++...++.+ ...+++..-++++++-.+++.
T Consensus 419 ~~~~G~l~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~~~--~~~fSw~~~a~~y~~lY~~l~ 480 (485)
T PRK14099 419 GVATGVQFSPVTADALAAALRKTAALFADPVAWRRLQRNGM--TTDVSWRNPAQHYAALYRSLV 480 (485)
T ss_pred CCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhh--hhcCChHHHHHHHHHHHHHHH
Confidence 25899999999999999998532 13333333232222 367888888888776666554
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.5e-18 Score=199.36 Aligned_cols=313 Identities=15% Similarity=0.131 Sum_probs=185.9
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChH--Hhh------------cC
Q 044635 180 WQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE--IYK------------TL 245 (831)
Q Consensus 180 w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e--~f~------------~l 245 (831)
|.....+...+...+.+... ..|+|.+|+++-.++..++++.. ++|+.+..|....... +.. .+
T Consensus 94 ~~~~~~~~~~l~~~~~~~~~-~~DvIH~h~~~~~~~~~~~~~~~-~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (439)
T TIGR02472 94 WPYLDELADNLLQHLRQQGH-LPDLIHAHYADAGYVGARLSRLL-GVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNI 171 (439)
T ss_pred hhhHHHHHHHHHHHHHHcCC-CCCEEEEcchhHHHHHHHHHHHh-CCCEEEecccccchhhhhcccCCCChhhhhhhcch
Confidence 44444444445454443321 13999999987666666665544 6799999997532211 000 00
Q ss_pred CChH-HHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEE-cCEEEEEEEeecccChHHHHHhhCCcch
Q 044635 246 PIRE-EILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEY-YGRTVSIKILPVGIHMGQLQSVLSLPGT 323 (831)
Q Consensus 246 p~r~-eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~-~gr~~~i~v~P~GId~~~~~~~~~~~~~ 323 (831)
+.+- .....+-.+|.|...+...++.-+. .+ +-...++.++|+|||++.|.+....+..
T Consensus 172 ~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~-------------------~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~ 232 (439)
T TIGR02472 172 SRRIEAEEETLAHASLVITSTHQEIEEQYA-------------------LYDSYQPERMQVIPPGVDLSRFYPPQSSEET 232 (439)
T ss_pred HHHHHHHHHHHHhCCEEEECCHHHHHHHHH-------------------hccCCCccceEEECCCcChhhcCCCCccccc
Confidence 1110 0112333466655544332221110 00 1123478889999999988643221111
Q ss_pred HHHHHHHHHHhc-cCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecC-CCCCch-hHHHHHHHHHH
Q 044635 324 EAKVSELIKQFH-DQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANP-ARGRGK-DVKEVQAETYS 400 (831)
Q Consensus 324 ~~~~~~lr~~~~-~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p-~r~~~~-~~~~l~~~i~~ 400 (831)
...+..+++++ .+++++|++|||+++.||+..+|+||.++.+..+.. ++++ ++|.. .+.... ...++.+++..
T Consensus 233 -~~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~--~l~l-i~G~g~~~~~l~~~~~~~~~~~~~ 308 (439)
T TIGR02472 233 -SEIDNLLAPFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMA--NLVL-VLGCRDDIRKMESQQREVLQKVLL 308 (439)
T ss_pred -hhHHHHHHhhccccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhc--cEEE-EeCCccccccccHHHHHHHHHHHH
Confidence 11222223333 456789999999999999999999998642211111 2322 34521 111111 01122333444
Q ss_pred HHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHc----CEeEECCCccCCC---CCCCC-CceEEEecccccccccC-
Q 044635 401 TVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVA----ECCLVTAVRDGSE---PSSPK-KSMLVVSEFIGCSPSLS- 471 (831)
Q Consensus 401 lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~A----Dv~vvtS~~eGma---~~~~~-~g~lVlSe~~G~~~~l~- 471 (831)
++.++ ++...+.|.+.++.+++.++|+.| |+||+||.+|||. .+++. +.|+|+|...|+.+.+.
T Consensus 309 ~~~~~-------~l~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~ 381 (439)
T TIGR02472 309 LIDRY-------DLYGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIAN 381 (439)
T ss_pred HHHHc-------CCCceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcC
Confidence 44442 233345567889999999999988 9999999999982 12222 45788888877777663
Q ss_pred --CCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHH
Q 044635 472 --GAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYV-STHDVGYWARSFLQD 525 (831)
Q Consensus 472 --~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~ 525 (831)
+|++|+|.|++++|++|.++++.+ ++++...++.++++ ..+++..-++++++-
T Consensus 382 ~~~G~lv~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l 437 (439)
T TIGR02472 382 CRNGLLVDVLDLEAIASALEDALSDS-SQWQLWSRNGIEGVRRHYSWDAHVEKYLRI 437 (439)
T ss_pred CCcEEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 589999999999999999999854 55666666677766 457877777766654
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.7e-18 Score=194.56 Aligned_cols=297 Identities=14% Similarity=0.127 Sum_probs=188.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCC--hHH-hh-cCCCh--------HH
Q 044635 183 YVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPS--SEI-YK-TLPIR--------EE 250 (831)
Q Consensus 183 Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~--~e~-f~-~lp~r--------~e 250 (831)
...+-+.......+.+.| |+|..| +.+....++++.+|++++..++|..|-. .+. |. ..+.+ ..
T Consensus 71 ~~~~~~~~~~~~~~~~~p--dvi~~h--~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (396)
T cd03818 71 GQAVARALLALRAKGFRP--DVIVAH--PGWGETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNR 146 (396)
T ss_pred HHHHHHHHHHHHhcCCCC--CEEEEC--CccchhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHh
Confidence 333333333333344455 899998 5667777899999999998877643311 110 11 11111 11
Q ss_pred ---HHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHH
Q 044635 251 ---ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKV 327 (831)
Q Consensus 251 ---il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~ 327 (831)
+...+-.+|.+...+......|.. .. ..++.++|+|||.+.|.+... ..
T Consensus 147 ~~~~~~~~~~ad~vi~~s~~~~~~~~~--------------------~~--~~ki~vI~ngvd~~~f~~~~~------~~ 198 (396)
T cd03818 147 NALILLALAQADAGVSPTRWQRSTFPA--------------------EL--RSRISVIHDGIDTDRLRPDPQ------AR 198 (396)
T ss_pred hhHhHHHHHhCCEEECCCHHHHhhCcH--------------------hh--ccceEEeCCCccccccCCCch------hh
Confidence 234566778887766544443321 01 136788999999988853211 11
Q ss_pred HHHHHHhc-cCCcEEEEeccC-cccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchh---HHHHHHHHHHHH
Q 044635 328 SELIKQFH-DQGKVMLLGVDD-MDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKD---VKEVQAETYSTV 402 (831)
Q Consensus 328 ~~lr~~~~-~~~~~iil~VdR-ld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~---~~~l~~~i~~lv 402 (831)
..++.... ..++++|+++|| +.+.||++.+++|+.++.+++|+++ |+++|......+.. ..++++ ++.
T Consensus 199 ~~~~~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~----lvivG~~~~~~g~~~~~~~~~~~---~~~ 271 (396)
T cd03818 199 LRLPNGRVLTPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDAR----VVIVGGDGVSYGAPPPDGESWKQ---HML 271 (396)
T ss_pred hcccccccCCCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcE----EEEEcCCCcccCCCCCCcccHHH---HHH
Confidence 11222221 257789999998 9999999999999999999999877 99898532111110 011122 222
Q ss_pred HHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCC---CCCCC-CceEEEeccccccccc---CCCce
Q 044635 403 ERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSE---PSSPK-KSMLVVSEFIGCSPSL---SGAIR 475 (831)
Q Consensus 403 ~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma---~~~~~-~g~lVlSe~~G~~~~l---~~all 475 (831)
++++.+.+. ..| .+.|.++.+++.++|+.||++++||..||++ .+++. +.|+|+|...|..+.+ .+|++
T Consensus 272 ~~~~~~~~~---~~V-~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~e~i~~~~~G~l 347 (396)
T cd03818 272 DELGGRLDL---SRV-HFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVREVITDGENGLL 347 (396)
T ss_pred HHhhcccCc---ceE-EEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCchhhcccCCceEE
Confidence 333322221 134 4567899999999999999999999998862 12222 4577777777666666 35899
Q ss_pred eCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcc-CCHHHHHHHHH
Q 044635 476 VNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVST-HDVGYWARSFL 523 (831)
Q Consensus 476 VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l 523 (831)
|+|.|++++|++|.++|+.+ +++....++.++++.+ +++...+++++
T Consensus 348 v~~~d~~~la~~i~~ll~~~-~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 348 VDFFDPDALAAAVIELLDDP-ARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred cCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 99999999999999999865 4555566677777766 66555555443
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.4e-17 Score=189.24 Aligned_cols=270 Identities=16% Similarity=0.107 Sum_probs=184.8
Q ss_pred CCEEEEeCccccchHHHHHhh-cCCCeEEEEEeccCCC-hHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHH
Q 044635 202 DDFVWVHDYHLMVLPTFLRKR-FNRVKLGFFLHSPFPS-SEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRM 279 (831)
Q Consensus 202 ~d~vwvhDyhL~llp~~lr~~-~~~~~i~~flH~PfP~-~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~ 279 (831)
-|+|..|..+.-.+..++++. ....++.+++|-+-.. ..+.. ..+..+-+.+-.+|.|-..+....+.+.+
T Consensus 119 ~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~~~~--~~~~~~~~~~~~ad~vv~~S~~~~~~l~~----- 191 (406)
T PRK15427 119 ADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSREVLN--HYTPEYQQLFRRGDLMLPISDLWAGRLQK----- 191 (406)
T ss_pred CCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccchhhh--hhhHHHHHHHHhCCEEEECCHHHHHHHHH-----
Confidence 389999987766666777663 2245677888854211 11110 11122333344688887766544433321
Q ss_pred hCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHH
Q 044635 280 LGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLL 359 (831)
Q Consensus 280 l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~ 359 (831)
+|. ...+|.++|+|||.+.|..... ... .+...|++|||+.+.||++.+++
T Consensus 192 ~g~---------------~~~ki~vi~nGvd~~~f~~~~~------------~~~--~~~~~il~vGrl~~~Kg~~~ll~ 242 (406)
T PRK15427 192 MGC---------------PPEKIAVSRMGVDMTRFSPRPV------------KAP--ATPLEIISVARLTEKKGLHVAIE 242 (406)
T ss_pred cCC---------------CHHHEEEcCCCCCHHHcCCCcc------------ccC--CCCeEEEEEeCcchhcCHHHHHH
Confidence 121 1236778999999988742110 011 34567999999999999999999
Q ss_pred HHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEe
Q 044635 360 AMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECC 439 (831)
Q Consensus 360 A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~ 439 (831)
|+..+.+++|+++ |+++| +|+..+ ++++++++. +..+.+.+.|.++++|+..+|+.||+|
T Consensus 243 a~~~l~~~~~~~~----l~ivG-----~G~~~~----~l~~~~~~~-------~l~~~V~~~G~~~~~el~~~l~~aDv~ 302 (406)
T PRK15427 243 ACRQLKEQGVAFR----YRILG-----IGPWER----RLRTLIEQY-------QLEDVVEMPGFKPSHEVKAMLDDADVF 302 (406)
T ss_pred HHHHHHhhCCCEE----EEEEE-----CchhHH----HHHHHHHHc-------CCCCeEEEeCCCCHHHHHHHHHhCCEE
Confidence 9999988888765 88888 444433 444444442 233466778899999999999999999
Q ss_pred EECCCc------cCCC---CCCCC-CceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 044635 440 LVTAVR------DGSE---PSSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKH 506 (831)
Q Consensus 440 vvtS~~------eGma---~~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~ 506 (831)
|+||.. ||+. .+++. +.|+|+|..+|..+.+ .+|++|+|.|++++|++|.+++++++++++...++.
T Consensus 303 v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~~l~~~d~~~~~~~~~~a 382 (406)
T PRK15427 303 LLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLAAFSQLDTDELAPVVKRA 382 (406)
T ss_pred EECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 999984 8872 12222 4577777777776666 358999999999999999999997777777777778
Q ss_pred hhhh-ccCCHHHHHHHHHHHHH
Q 044635 507 YRYV-STHDVGYWARSFLQDLE 527 (831)
Q Consensus 507 ~~~v-~~~~~~~W~~~~l~~l~ 527 (831)
++++ .++++...++++.+-++
T Consensus 383 r~~v~~~f~~~~~~~~l~~~~~ 404 (406)
T PRK15427 383 REKVETDFNQQVINRELASLLQ 404 (406)
T ss_pred HHHHHHhcCHHHHHHHHHHHHh
Confidence 8777 55888888887766554
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.9e-18 Score=180.08 Aligned_cols=186 Identities=20% Similarity=0.172 Sum_probs=118.7
Q ss_pred eEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCCC----
Q 044635 575 AILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRRD---- 649 (831)
Q Consensus 575 li~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~~---- 649 (831)
+|++|+||||++ .+. .+++++++|++|.+ .|+.++++|||+...+..++..+. ..++|++||+.|+.+.+
T Consensus 1 li~~DlDGTLl~---~~~-~~~~~~~ai~~l~~-~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~~~~~~ 75 (225)
T TIGR02461 1 VIFTDLDGTLLP---PGY-EPGPAREALEELKD-LGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPRGYFPF 75 (225)
T ss_pred CEEEeCCCCCcC---CCC-CchHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecCccccc
Confidence 689999999998 333 45689999999987 599999999999999998887763 45899999999998643
Q ss_pred ---------c--eEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEee---cc----ceEEEee------ccCC-Cc-cc-
Q 044635 650 ---------E--EWETCIPVADCGWKQIAEPVMKLYTETTDGSTIED---KE----TALVWSY------EDAD-PD-FG- 702 (831)
Q Consensus 650 ---------~--~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~---k~----~~l~~~~------~~~d-~~-~~- 702 (831)
. .+...+ + .+.+.++++...+..+-.+... .+ ..+.... +... .- ++
T Consensus 76 ~~~~~~~~~~~~i~~~~l---~---~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~ 149 (225)
T TIGR02461 76 PVGAGREVGNYEVIELGK---P---VAKIRAALKEAENEYGLKYYGNSTAEEVEKLTGLPRELAPLAKRREYSETIFLWS 149 (225)
T ss_pred cccccccCCCeEEEEcCC---C---HHHHHHHHHHHHHhcCccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCCcccCCC
Confidence 1 122111 1 2344555543332111111000 00 0000000 0000 00 00
Q ss_pred hHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCC--CcccEEEEcCCchhHHHHHHcch
Q 044635 703 SCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREM--LPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 703 ~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~--~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
..+..++.+.+ ....+.+..+..++++ ++++|||.|++.+++.+ ++ +...+++|||+.||++||+.++.
T Consensus 150 ~e~~~~~~~~~----~~~~~~~~~s~~~~~i-~~~~sK~~al~~l~~~~---~~~~~~~~~i~~GD~~nD~~ml~~ag~ 220 (225)
T TIGR02461 150 REGWEAILVTA----RARGLKYTHGGRFYTV-HGGSDKGKAIKRLLDLY---KLRPGAIESVGLGDSENDFPMFEVVDL 220 (225)
T ss_pred HHHHHHHHHHH----HHcCCcEEECCEEEEE-CCCCCHHHHHHHHHHHh---ccccCcccEEEEcCCHHHHHHHHhCCC
Confidence 11122333333 2344667777777876 55999999999999987 55 56689999999999999999984
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.79 E-value=3e-18 Score=179.72 Aligned_cols=189 Identities=15% Similarity=0.159 Sum_probs=130.0
Q ss_pred ceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCCCce
Q 044635 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRRDEE 651 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~~~~ 651 (831)
+|+||+|+||||++ ++...++.+.++|++|.+ .|+.|+++|||+...+..+++.+. ..++|++||+.|+.+.+
T Consensus 1 ~KLIftDLDGTLLd---~~~~~~~~a~~aL~~Lk~-~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNGA~I~~p~~-- 74 (302)
T PRK12702 1 MRLVLSSLDGSLLD---LEFNSYGAARQALAALER-RSIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDGSAIYVPEH-- 74 (302)
T ss_pred CcEEEEeCCCCCcC---CCCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCCcEEEEccc--
Confidence 47999999999999 666788999999999987 599999999999999999988773 45899999999998743
Q ss_pred EEEc-C-----CcCCccH-------HHHHHHHHHHHhccCCCeeEe------------------------eccceEEEee
Q 044635 652 WETC-I-----PVADCGW-------KQIAEPVMKLYTETTDGSTIE------------------------DKETALVWSY 694 (831)
Q Consensus 652 w~~~-~-----~~~~~~w-------~~~v~~il~~~~e~~~gs~ie------------------------~k~~~l~~~~ 694 (831)
|... . ...+..| ...++.+++...+.....+.- .++++..+.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~SEp~~w 154 (302)
T PRK12702 75 YFPAGILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQKREYSEIFSY 154 (302)
T ss_pred cccccccccccccCCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCcceEe
Confidence 2200 0 0011111 234444554433322211111 1122222222
Q ss_pred ccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEe------------------C---CCCHHHHHHHHHHHhhh
Q 044635 695 EDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKP------------------Q---GVNKGLVAKRLLSTMQE 753 (831)
Q Consensus 695 ~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p------------------~---gvnKG~al~~Ll~~l~~ 753 (831)
... ..++ .+.+...++.+..|..++.++. . +++||.|+++|.+.+..
T Consensus 155 ~~~--------~~~~----~~~~~~~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~ 222 (302)
T PRK12702 155 SGD--------PARL----REAFAQQEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQR 222 (302)
T ss_pred cCC--------HHHH----HHHHHHcCCeEEecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHHh
Confidence 211 1112 4445566778889998988886 5 99999999999999854
Q ss_pred cCCCcccEEEEcCCchhHHHHHHcchh
Q 044635 754 REMLPDFVLCVGDDRSDEDMFEVIISS 780 (831)
Q Consensus 754 ~g~~~d~vla~GD~~NDe~Mf~~a~~~ 780 (831)
.. ..=.++++|||.||++|++++...
T Consensus 223 ~~-~~~~tiaLGDspND~~mLe~~D~~ 248 (302)
T PRK12702 223 HL-GPIKALGIGCSPPDLAFLRWSEQK 248 (302)
T ss_pred cc-CCceEEEecCChhhHHHHHhCCee
Confidence 33 233799999999999999999853
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.2e-19 Score=191.76 Aligned_cols=198 Identities=20% Similarity=0.323 Sum_probs=122.9
Q ss_pred ceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC---CCceEEecCCEEEEeCCC
Q 044635 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC---ENLGIAAEHGYFFRLRRD 649 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~---~~~~liaenGa~i~~~~~ 649 (831)
++||++|+||||++ .+..-..+..+.++ ....++..++++|||+..++.+.+... .+..+|+.+|+.|+....
T Consensus 2 ~~ll~sDlD~Tl~~---~~~~~~~~l~~~l~-~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~~ 77 (247)
T PF05116_consen 2 PRLLASDLDGTLID---GDDEALARLEELLE-QQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGEN 77 (247)
T ss_dssp SEEEEEETBTTTBH---CHHHHHHHHHHHHH-HHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESST
T ss_pred CEEEEEECCCCCcC---CCHHHHHHHHHHHH-HhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcCC
Confidence 68999999999993 12222244444444 223568889999999999999888653 357899999999998431
Q ss_pred ----ceEEEcCCcCCccHHH-HHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCC--e
Q 044635 650 ----EEWETCIPVADCGWKQ-IAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEP--V 722 (831)
Q Consensus 650 ----~~w~~~~~~~~~~w~~-~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~--v 722 (831)
..|...+ +..|.. .+.+++..+.+-.+....+...+.+.+.+...+. ...++.|++.+...+ +
T Consensus 78 ~~~d~~w~~~i---~~~w~~~~v~~~l~~~~~l~~q~~~~q~~~k~sy~~~~~~~-------~~~~~~i~~~l~~~~l~~ 147 (247)
T PF05116_consen 78 WQPDEEWQAHI---DERWDRERVEEILAELPGLRPQPESEQRPFKISYYVDPDDS-------ADILEEIRARLRQRGLRV 147 (247)
T ss_dssp TEE-HHHHHHH---HTT--HHHHHHHHHCHCCEEEGGCCCGCCTCECEEEETTSH-------CHHHHHHHHHHHCCTCEE
T ss_pred CcChHHHHHHH---HhcCChHHHHHHHHHhhCcccCCccccCCeeEEEEEecccc-------hhHHHHHHHHHHHcCCCe
Confidence 1232222 223433 4445554443211111122233445555443221 123344554444333 3
Q ss_pred E-EEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCC
Q 044635 723 T-VKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKP 801 (831)
Q Consensus 723 ~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~ 801 (831)
. +.++..+++|.|+++|||.|+++|++++ ++++++|+++|||.||++||.... .+|.|||+.
T Consensus 148 ~~i~s~~~~ldilP~~a~K~~Al~~L~~~~---~~~~~~vl~aGDSgND~~mL~~~~--------------~~vvV~Na~ 210 (247)
T PF05116_consen 148 NVIYSNGRDLDILPKGASKGAALRYLMERW---GIPPEQVLVAGDSGNDLEMLEGGD--------------HGVVVGNAQ 210 (247)
T ss_dssp EEEECTCCEEEEEETT-SHHHHHHHHHHHH---T--GGGEEEEESSGGGHHHHCCSS--------------EEEE-TTS-
T ss_pred eEEEccceeEEEccCCCCHHHHHHHHHHHh---CCCHHHEEEEeCCCCcHHHHcCcC--------------CEEEEcCCC
Confidence 3 4468899999999999999999999999 999999999999999999995543 589999863
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.2e-17 Score=184.57 Aligned_cols=282 Identities=15% Similarity=0.117 Sum_probs=192.1
Q ss_pred CCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhh-----cCCChHH-HHHHHhcCCeEeecCHHhHHHHHHH
Q 044635 202 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYK-----TLPIREE-ILRALLNSDLIGFHTFDYARHFLSC 275 (831)
Q Consensus 202 ~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~-----~lp~r~e-il~~ll~~dligf~t~~~~~~Fl~~ 275 (831)
.|+|.+|++...+.+.+++ +..++|+.+.+|..+|...... ....... ....+-.+|.|...+....+.+...
T Consensus 84 ~divh~~~~~~~~~~~~~~-~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~ 162 (388)
T TIGR02149 84 ADVVHSHTWYTFLAGHLAK-KLYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDILKY 162 (388)
T ss_pred CCeEeecchhhhhHHHHHH-HhcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHHHH
Confidence 4899999988766655544 4557899999998765322110 0000111 1234456788888777666655431
Q ss_pred HHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccccCH
Q 044635 276 CSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIFKGI 354 (831)
Q Consensus 276 ~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~KGi 354 (831)
- -+ -...++.++|+|+|...+.+. ....++++++ +.++++|+++||+.+.||+
T Consensus 163 ~---~~---------------~~~~~i~vi~ng~~~~~~~~~--------~~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~ 216 (388)
T TIGR02149 163 Y---PD---------------LDPEKVHVIYNGIDTKEYKPD--------DGNVVLDRYGIDRSRPYILFVGRITRQKGV 216 (388)
T ss_pred c---CC---------------CCcceEEEecCCCChhhcCCC--------chHHHHHHhCCCCCceEEEEEcccccccCH
Confidence 0 01 012467789999999877421 1234566666 5677899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHH
Q 044635 355 SLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYV 434 (831)
Q Consensus 355 ~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~ 434 (831)
..+++|+.++. ++++ |+++|.. ++..++.+++.+.+...+... ..|+++.+.++.+++..+|+
T Consensus 217 ~~li~a~~~l~---~~~~----l~i~g~g-----~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~ 279 (388)
T TIGR02149 217 PHLLDAVHYIP---KDVQ----VVLCAGA-----PDTPEVAEEVRQAVALLDRNR-----TGIIWINKMLPKEELVELLS 279 (388)
T ss_pred HHHHHHHHHHh---hcCc----EEEEeCC-----CCcHHHHHHHHHHHHHhcccc-----CceEEecCCCCHHHHHHHHH
Confidence 99999999873 3443 7766632 222345556666655543221 24777888899999999999
Q ss_pred HcCEeEECCCccCCCC---CCCC-CceEEEeccccccccc---CCCceeCCCCH------HHHHHHHHHHhcCCHHHHHH
Q 044635 435 VAECCLVTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNI------DAVSDAMDSALEMADQEKQL 501 (831)
Q Consensus 435 ~ADv~vvtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~------~~~A~ai~~aL~m~~~er~~ 501 (831)
.||++|+||..||++. ++.. +.|+|+|...|..+.+ .+|++++|.|+ ++++++|.++++. ++++..
T Consensus 280 ~aDv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~-~~~~~~ 358 (388)
T TIGR02149 280 NAEVFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLAD-PELAKK 358 (388)
T ss_pred hCCEEEeCCccCCCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhC-HHHHHH
Confidence 9999999999998821 2222 4578888877777666 35899999998 9999999999874 445555
Q ss_pred HHHHHhhhh-ccCCHHHHHHHHHHHHHH
Q 044635 502 RHEKHYRYV-STHDVGYWARSFLQDLER 528 (831)
Q Consensus 502 r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 528 (831)
..+..++++ .++++..+++++++-+++
T Consensus 359 ~~~~a~~~~~~~~s~~~~~~~~~~~y~~ 386 (388)
T TIGR02149 359 MGIAGRKRAEEEFSWGSIAKKTVEMYRK 386 (388)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 555556655 668999999988877664
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=99.79 E-value=2e-17 Score=191.55 Aligned_cols=281 Identities=14% Similarity=0.153 Sum_probs=189.2
Q ss_pred HHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCCh-H---HHHHH-HhcCCeEeecCHHhHH
Q 044635 196 EVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIR-E---EILRA-LLNSDLIGFHTFDYAR 270 (831)
Q Consensus 196 ~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r-~---eil~~-ll~~dligf~t~~~~~ 270 (831)
+..+| |+|++|+...+..+.++-.+..++|+.+.+|.-+|..-.....++. + .+.+- .-.+|.|...+....+
T Consensus 141 ~~~kp--DiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~~~ 218 (465)
T PLN02871 141 ARFKP--DLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALGK 218 (465)
T ss_pred HhCCC--CEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHHHH
Confidence 33455 8999998776666665544455788999999765532111111111 0 11111 2247888887776665
Q ss_pred HHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc--cCCcEEEEeccCc
Q 044635 271 HFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH--DQGKVMLLGVDDM 348 (831)
Q Consensus 271 ~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~--~~~~~iil~VdRl 348 (831)
.+... +. ....++.++|+|||.+.|.+.... ..+++++. .+++++|+++||+
T Consensus 219 ~l~~~-----~~--------------~~~~kv~vi~nGvd~~~f~p~~~~-------~~~~~~~~~~~~~~~~i~~vGrl 272 (465)
T PLN02871 219 ELEAA-----GV--------------TAANRIRVWNKGVDSESFHPRFRS-------EEMRARLSGGEPEKPLIVYVGRL 272 (465)
T ss_pred HHHHc-----CC--------------CCcCeEEEeCCccCccccCCcccc-------HHHHHHhcCCCCCCeEEEEeCCC
Confidence 55421 10 012367789999999888532211 23344442 2467899999999
Q ss_pred ccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHH
Q 044635 349 DIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYE 428 (831)
Q Consensus 349 d~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~e 428 (831)
.+.||+..+++|++++ |+++ |+++| +|+.. +++++++... +|+ |.|.++.+|
T Consensus 273 ~~~K~~~~li~a~~~~----~~~~----l~ivG-----~G~~~----~~l~~~~~~~----------~V~-f~G~v~~~e 324 (465)
T PLN02871 273 GAEKNLDFLKRVMERL----PGAR----LAFVG-----DGPYR----EELEKMFAGT----------PTV-FTGMLQGDE 324 (465)
T ss_pred chhhhHHHHHHHHHhC----CCcE----EEEEe-----CChHH----HHHHHHhccC----------CeE-EeccCCHHH
Confidence 9999999999888654 6554 88888 34443 3444443321 354 567899999
Q ss_pred HHHHHHHcCEeEECCCccCCCC---CCCC-CceEEEecccccccccC------CCceeCCCCHHHHHHHHHHHhcCCHHH
Q 044635 429 RIAYYVVAECCLVTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSLS------GAIRVNPWNIDAVSDAMDSALEMADQE 498 (831)
Q Consensus 429 l~aly~~ADv~vvtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l~------~allVnP~d~~~~A~ai~~aL~m~~~e 498 (831)
+..+|+.||++|+||..|||+. +++. +.|+|+|...|..+.+. +|++++|.|++++|++|.++++. ++.
T Consensus 325 v~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~ 403 (465)
T PLN02871 325 LSQAYASGDVFVMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLAD-PEL 403 (465)
T ss_pred HHHHHHHCCEEEECCcccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhC-HHH
Confidence 9999999999999999999821 2222 45777888877766653 48999999999999999999974 455
Q ss_pred HHHHHHHHhhhhccCCHHHHHHHHHHH-HHHHHHHh
Q 044635 499 KQLRHEKHYRYVSTHDVGYWARSFLQD-LERTCREH 533 (831)
Q Consensus 499 r~~r~~~~~~~v~~~~~~~W~~~~l~~-l~~~~~~~ 533 (831)
++...+..++++.++++...++++++. ..++...+
T Consensus 404 ~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~~ 439 (465)
T PLN02871 404 RERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWFW 439 (465)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 556666778888899999999999884 55555443
|
|
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.5e-17 Score=186.83 Aligned_cols=271 Identities=13% Similarity=0.132 Sum_probs=181.2
Q ss_pred CEEEEeCccccch-HHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHH-HHhcCCeEeecCHHhHHHHHHHHHHHh
Q 044635 203 DFVWVHDYHLMVL-PTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILR-ALLNSDLIGFHTFDYARHFLSCCSRML 280 (831)
Q Consensus 203 d~vwvhDyhL~ll-p~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~-~ll~~dligf~t~~~~~~Fl~~~~r~l 280 (831)
|+|.+|+++..+. ...+-.+..++|+.+..|..|+..+.... +...+.+ .+-.+|.|.+.+....+++....
T Consensus 90 DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~---- 163 (398)
T cd03796 90 TIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADASSI--HTNKLLRFSLADVDHVICVSHTSKENTVLRA---- 163 (398)
T ss_pred CEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccchhhH--HhhHHHHHhhccCCEEEEecHhHhhHHHHHh----
Confidence 8999999775543 33343445568999999987653322110 1112222 23467888887776555443210
Q ss_pred CCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHH
Q 044635 281 GLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLA 360 (831)
Q Consensus 281 ~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A 360 (831)
+ ....++.++|+|+|.+.|.+... . .- +++++|+++||+.+.||+..+++|
T Consensus 164 ~---------------~~~~k~~vi~ngvd~~~f~~~~~-----~-------~~--~~~~~i~~~grl~~~Kg~~~li~a 214 (398)
T cd03796 164 S---------------LDPERVSVIPNAVDSSDFTPDPS-----K-------RD--NDKITIVVISRLVYRKGIDLLVGI 214 (398)
T ss_pred C---------------CChhhEEEEcCccCHHHcCCCcc-----c-------CC--CCceEEEEEeccchhcCHHHHHHH
Confidence 0 12346778999999988753211 0 11 567899999999999999999999
Q ss_pred HHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeE
Q 044635 361 MEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCL 440 (831)
Q Consensus 361 ~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v 440 (831)
+..+.+++|+++ |+++|. ++..++++ +++++. +..+.+.+.|.++.+++..+|+.||+++
T Consensus 215 ~~~l~~~~~~~~----l~i~G~-----g~~~~~l~----~~~~~~-------~l~~~v~~~G~~~~~~~~~~l~~ad~~v 274 (398)
T cd03796 215 IPEICKKHPNVR----FIIGGD-----GPKRILLE----EMREKY-------NLQDRVELLGAVPHERVRDVLVQGHIFL 274 (398)
T ss_pred HHHHHhhCCCEE----EEEEeC-----CchHHHHH----HHHHHh-------CCCCeEEEeCCCCHHHHHHHHHhCCEEE
Confidence 999988888766 888883 34433444 444332 2223344567899999999999999999
Q ss_pred ECCCccCCCC---CCCC-CceEEEeccccccccc-CC-CceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhh-hhccC
Q 044635 441 VTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSL-SG-AIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYR-YVSTH 513 (831)
Q Consensus 441 vtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l-~~-allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~-~v~~~ 513 (831)
+||..||+.. +++. +.|+|+|...|..+.+ .+ +++++| |+++++++|.+++.++.+.+. ..+..++ ...++
T Consensus 275 ~pS~~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~~~~~~~~-~~~~l~~~l~~~l~~~~~~~~-~~~~~~~~~~~~f 352 (398)
T cd03796 275 NTSLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPDMILLAEP-DVESIVRKLEEAISILRTGKH-DPWSFHNRVKKMY 352 (398)
T ss_pred eCChhhccCHHHHHHHHcCCCEEECCCCCchhheeCCceeecCC-CHHHHHHHHHHHHhChhhhhh-HHHHHHHHHHhhC
Confidence 9999999821 2333 4577777777776666 33 444554 999999999999987654433 3344444 44668
Q ss_pred CHHHHHHHHHHHHHHHH
Q 044635 514 DVGYWARSFLQDLERTC 530 (831)
Q Consensus 514 ~~~~W~~~~l~~l~~~~ 530 (831)
++..-++++++-+++..
T Consensus 353 s~~~~~~~~~~~y~~l~ 369 (398)
T cd03796 353 SWEDVAKRTEKVYDRIL 369 (398)
T ss_pred CHHHHHHHHHHHHHHHh
Confidence 88888888887777654
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.9e-17 Score=190.71 Aligned_cols=308 Identities=17% Similarity=0.197 Sum_probs=198.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHHHhhc-----CCCeEEEEEeccCCCh----HHhhcC--CC--
Q 044635 181 QAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRF-----NRVKLGFFLHSPFPSS----EIYKTL--PI-- 247 (831)
Q Consensus 181 ~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~-----~~~~i~~flH~PfP~~----e~f~~l--p~-- 247 (831)
..|...++...+.+.+. ...-|+|.+||+|-.++|.++++.. .++|+.|..|.+.+.. ..+..+ ++
T Consensus 110 ~~~~~f~~~~~~~l~~~-~~~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~ 188 (476)
T cd03791 110 ERFALFSRAALELLRRL-GWKPDIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEE 188 (476)
T ss_pred HHHHHHHHHHHHHHHhc-CCCCcEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccc
Confidence 44544555555544432 1224899999999999999998774 5789999999864321 111111 11
Q ss_pred ------------hHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEE--EcCEEEEEEEeecccChHH
Q 044635 248 ------------REEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLE--YYGRTVSIKILPVGIHMGQ 313 (831)
Q Consensus 248 ------------r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~--~~gr~~~i~v~P~GId~~~ 313 (831)
..-+..++..||.|...++.|++..++.- .|. +++ ...+..++.++|+|||.+.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~-----------~~~-gl~~~~~~~~~ki~~I~NGid~~~ 256 (476)
T cd03791 189 LFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPE-----------FGE-GLDGLLRARAGKLSGILNGIDYDV 256 (476)
T ss_pred hhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCC-----------CCc-chHHHHHhccCCeEEEeCCCcCcc
Confidence 02233456667777777776666544210 000 000 0123457889999999988
Q ss_pred HHHhhCCc-----------chHHHHHHHHHHhc-c--CCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 044635 314 LQSVLSLP-----------GTEAKVSELIKQFH-D--QGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQ 379 (831)
Q Consensus 314 ~~~~~~~~-----------~~~~~~~~lr~~~~-~--~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvq 379 (831)
|.+..... ........++++++ + .++++|+++||+.+.||++.+++|++++.+++ +.|++
T Consensus 257 ~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi 330 (476)
T cd03791 257 WNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLVI 330 (476)
T ss_pred cCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEEE
Confidence 86432211 11223456778886 3 57899999999999999999999999987653 44888
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCC---CCCCC-C
Q 044635 380 IANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSE---PSSPK-K 455 (831)
Q Consensus 380 ig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma---~~~~~-~ 455 (831)
+|.. + .++++++.+++.+.. ..++++.+ .+.+++..+|+.||++++||..||++ .+++. +
T Consensus 331 ~G~g-----~--~~~~~~~~~~~~~~~--------~~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G 394 (476)
T cd03791 331 LGSG-----D--PEYEEALRELAARYP--------GRVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYG 394 (476)
T ss_pred EecC-----C--HHHHHHHHHHHHhCC--------CcEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCC
Confidence 8842 1 234555666655421 13666554 45777889999999999999999882 12222 4
Q ss_pred ceEEEeccccccccc-C--------CCceeCCCCHHHHHHHHHHHhcCCH--HHHHHHHHHHhhhhccCCHHHHHHHHHH
Q 044635 456 SMLVVSEFIGCSPSL-S--------GAIRVNPWNIDAVSDAMDSALEMAD--QEKQLRHEKHYRYVSTHDVGYWARSFLQ 524 (831)
Q Consensus 456 g~lVlSe~~G~~~~l-~--------~allVnP~d~~~~A~ai~~aL~m~~--~er~~r~~~~~~~v~~~~~~~W~~~~l~ 524 (831)
.|+|+|...|..+.+ . +|+++.|.|+++++++|.+++.... +++....++..+ ..+++..-++++++
T Consensus 395 ~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~ 472 (476)
T cd03791 395 TVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYLE 472 (476)
T ss_pred CCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--cCCChHHHHHHHHH
Confidence 578888888888777 2 6999999999999999999986432 222222222222 34666666666554
Q ss_pred H
Q 044635 525 D 525 (831)
Q Consensus 525 ~ 525 (831)
-
T Consensus 473 ~ 473 (476)
T cd03791 473 L 473 (476)
T ss_pred H
Confidence 3
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.77 E-value=8.4e-17 Score=181.12 Aligned_cols=279 Identities=17% Similarity=0.116 Sum_probs=190.0
Q ss_pred CEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCC------hH-HHHHHHhcCCeEeecCHHhHHHHHHH
Q 044635 203 DFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPI------RE-EILRALLNSDLIGFHTFDYARHFLSC 275 (831)
Q Consensus 203 d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~------r~-eil~~ll~~dligf~t~~~~~~Fl~~ 275 (831)
|+|.+|.+....++..+.+. .++|+.+..|...+.........+ +. .....+..+|.+.+.+......+...
T Consensus 103 Div~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~ 181 (398)
T cd03800 103 DLIHAHYWDSGLVALLLARR-LGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIASTPQEAEELYSL 181 (398)
T ss_pred cEEEEecCccchHHHHHHhh-cCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHH
Confidence 89999988777766666544 478899999975532211100000 11 11234557999999888766655431
Q ss_pred HHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccccCH
Q 044635 276 CSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIFKGI 354 (831)
Q Consensus 276 ~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~KGi 354 (831)
.+ ....++.++|+|+|.+.+...... ...+++++ ..++.+|+++||+++.||+
T Consensus 182 ----~~---------------~~~~~~~vi~ng~~~~~~~~~~~~-------~~~~~~~~~~~~~~~i~~~gr~~~~k~~ 235 (398)
T cd03800 182 ----YG---------------AYPRRIRVVPPGVDLERFTPYGRA-------EARRARLLRDPDKPRILAVGRLDPRKGI 235 (398)
T ss_pred ----cc---------------ccccccEEECCCCCccceecccch-------hhHHHhhccCCCCcEEEEEcccccccCH
Confidence 00 112247789999998877532211 01133333 4578899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHH
Q 044635 355 SLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYV 434 (831)
Q Consensus 355 ~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~ 434 (831)
..+++|+..+.+++|+++ |+++|...... ......+++.++++.+ ..+-+.+.+.++.+++..+|+
T Consensus 236 ~~ll~a~~~l~~~~~~~~----l~i~G~~~~~~---~~~~~~~~~~~~~~~~-------~~~~v~~~g~~~~~~~~~~~~ 301 (398)
T cd03800 236 DTLIRAYAELPELRERAN----LVIVGGPRDDI---LAMDEEELRELARELG-------VIDRVDFPGRVSREDLPALYR 301 (398)
T ss_pred HHHHHHHHHHHHhCCCeE----EEEEECCCCcc---hhhhhHHHHHHHHhcC-------CCceEEEeccCCHHHHHHHHH
Confidence 999999999988877765 99898543221 1222334455544432 223445678999999999999
Q ss_pred HcCEeEECCCccCCCC---CCC-CCceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHh
Q 044635 435 VAECCLVTAVRDGSEP---SSP-KKSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHY 507 (831)
Q Consensus 435 ~ADv~vvtS~~eGma~---~~~-~~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~ 507 (831)
.||++++||..||+.. ++. .+.|+|+|+..|..+.+ ..|++++|.|+++++++|.++++.+ +++....++.+
T Consensus 302 ~adi~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~a~ 380 (398)
T cd03800 302 AADVFVNPALYEPFGLTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDP-ALRRRLSRAGL 380 (398)
T ss_pred hCCEEEecccccccCcHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHH
Confidence 9999999999999831 222 24588888888887777 3589999999999999999999754 45555555666
Q ss_pred hhh-ccCCHHHHHHHHH
Q 044635 508 RYV-STHDVGYWARSFL 523 (831)
Q Consensus 508 ~~v-~~~~~~~W~~~~l 523 (831)
+++ ..+++...+++++
T Consensus 381 ~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 381 RRARARYTWERVAARLL 397 (398)
T ss_pred HHHHHhCCHHHHHHHHh
Confidence 776 7788888887764
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=99.77 E-value=8.2e-17 Score=178.32 Aligned_cols=278 Identities=17% Similarity=0.184 Sum_probs=187.2
Q ss_pred HHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHH-hcCCeEeecCHHhHHHH
Q 044635 194 IMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRAL-LNSDLIGFHTFDYARHF 272 (831)
Q Consensus 194 i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~l-l~~dligf~t~~~~~~F 272 (831)
+++..+| |+|++|.+|..++..+++...+..++....|...+..-+ +..+.+.. ..++.+...+....+.|
T Consensus 74 ~~~~~~p--div~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~~ 145 (360)
T cd04951 74 ILRQFKP--DVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGRL------RMLAYRLTDFLSDLTTNVSKEALDYF 145 (360)
T ss_pred HHHhcCC--CEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhHH------HHHHHHHHhhccCceEEEcHHHHHHH
Confidence 4455666 899999999888888887776777888888854322111 11111111 12444444455444444
Q ss_pred HHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccc
Q 044635 273 LSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIF 351 (831)
Q Consensus 273 l~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~ 351 (831)
+... .-...++.++|+|+|...|... ......++++++ ..++++++++||+.+.
T Consensus 146 ~~~~-------------------~~~~~~~~~i~ng~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~g~~~~~ 200 (360)
T cd04951 146 IASK-------------------AFNANKSFVVYNGIDTDRFRKD------PARRLKIRNALGVKNDTFVILAVGRLVEA 200 (360)
T ss_pred Hhcc-------------------CCCcccEEEEccccchhhcCcc------hHHHHHHHHHcCcCCCCEEEEEEeeCchh
Confidence 4210 0012367789999998876421 122345667776 5678999999999999
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHH
Q 044635 352 KGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIA 431 (831)
Q Consensus 352 KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~a 431 (831)
||+..+++|+.++.+++|+++ |+++|. ++..++++ +.+.+.+ ..+.+.+.++ .+++..
T Consensus 201 kg~~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~~~----~~~~~~~-------~~~~v~~~g~--~~~~~~ 258 (360)
T cd04951 201 KDYPNLLKAFAKLLSDYLDIK----LLIAGD-----GPLRATLE----RLIKALG-------LSNRVKLLGL--RDDIAA 258 (360)
T ss_pred cCcHHHHHHHHHHHhhCCCeE----EEEEcC-----CCcHHHHH----HHHHhcC-------CCCcEEEecc--cccHHH
Confidence 999999999999998888766 888883 33333333 3333322 2233334454 468999
Q ss_pred HHHHcCEeEECCCccCCCC---CCC-CCceEEEeccccccccc-CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 044635 432 YYVVAECCLVTAVRDGSEP---SSP-KKSMLVVSEFIGCSPSL-SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKH 506 (831)
Q Consensus 432 ly~~ADv~vvtS~~eGma~---~~~-~~g~lVlSe~~G~~~~l-~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~ 506 (831)
+|+.||++++||..|||+. ++. .+.|+|+|...|..+.+ .+|..++|.|++++|++|.++++.+++.+..+....
T Consensus 259 ~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~~ 338 (360)
T cd04951 259 YYNAADLFVLSSAWEGFGLVVAEAMACELPVVATDAGGVREVVGDSGLIVPISDPEALANKIDEILKMSGEERDIIGARR 338 (360)
T ss_pred HHHhhceEEecccccCCChHHHHHHHcCCCEEEecCCChhhEecCCceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 9999999999999999821 222 24578888877766666 568999999999999999999987777666655553
Q ss_pred hhhhccCCHHHHHHHHHHHH
Q 044635 507 YRYVSTHDVGYWARSFLQDL 526 (831)
Q Consensus 507 ~~~v~~~~~~~W~~~~l~~l 526 (831)
......+++..+++++++-+
T Consensus 339 ~~~~~~~s~~~~~~~~~~~y 358 (360)
T cd04951 339 ERIVKKFSINSIVQQWLTLY 358 (360)
T ss_pred HHHHHhcCHHHHHHHHHHHh
Confidence 34457788888888776543
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.4e-16 Score=179.55 Aligned_cols=280 Identities=17% Similarity=0.135 Sum_probs=185.3
Q ss_pred CCEEEEeCccccchH-HHHHhhcCCCeEEEEEeccCCChHHh-hcCC--Ch----HHHHH-HHhcCCeEeecCHHhHHHH
Q 044635 202 DDFVWVHDYHLMVLP-TFLRKRFNRVKLGFFLHSPFPSSEIY-KTLP--IR----EEILR-ALLNSDLIGFHTFDYARHF 272 (831)
Q Consensus 202 ~d~vwvhDyhL~llp-~~lr~~~~~~~i~~flH~PfP~~e~f-~~lp--~r----~eil~-~ll~~dligf~t~~~~~~F 272 (831)
.|+|++|...+...+ .++-.+..+.++.+..|--||..-.- ...+ .. ..+.+ .+-.+|.|...+....+.+
T Consensus 107 ~Div~~~~p~~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~ 186 (412)
T PRK10307 107 PDRVIGVVPTLFCAPGARLLARLSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMMNKA 186 (412)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHhhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHH
Confidence 389999976654332 33333444567777777555432110 0011 00 11111 2335888888887666655
Q ss_pred HHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccc
Q 044635 273 LSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIF 351 (831)
Q Consensus 273 l~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~ 351 (831)
.+ .+ ....++.++|+|||.+.|.+... .....++++++ +.++++|+++||+.+.
T Consensus 187 ~~-----~~---------------~~~~~i~vi~ngvd~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~G~l~~~ 241 (412)
T PRK10307 187 RE-----KG---------------VAAEKVIFFPNWSEVARFQPVAD-----ADVDALRAQLGLPDGKKIVLYSGNIGEK 241 (412)
T ss_pred HH-----cC---------------CCcccEEEECCCcCHhhcCCCCc-----cchHHHHHHcCCCCCCEEEEEcCccccc
Confidence 32 11 12346788999999988753211 11235677776 5677899999999999
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHH
Q 044635 352 KGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIA 431 (831)
Q Consensus 352 KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~a 431 (831)
||+..+++|++++ +++|+++ |+++| +|+..++ +++++++. +...|+ +.|.++.+++..
T Consensus 242 kg~~~li~a~~~l-~~~~~~~----l~ivG-----~g~~~~~----l~~~~~~~-------~l~~v~-f~G~~~~~~~~~ 299 (412)
T PRK10307 242 QGLELVIDAARRL-RDRPDLI----FVICG-----QGGGKAR----LEKMAQCR-------GLPNVH-FLPLQPYDRLPA 299 (412)
T ss_pred cCHHHHHHHHHHh-ccCCCeE----EEEEC-----CChhHHH----HHHHHHHc-------CCCceE-EeCCCCHHHHHH
Confidence 9999999999876 4556544 88888 3444333 44444432 222455 457899999999
Q ss_pred HHHHcCEeEECCCccCCC--C-----CCCC-CceEEEeccccc--cccc-CCCceeCCCCHHHHHHHHHHHhcCCHHHHH
Q 044635 432 YYVVAECCLVTAVRDGSE--P-----SSPK-KSMLVVSEFIGC--SPSL-SGAIRVNPWNIDAVSDAMDSALEMADQEKQ 500 (831)
Q Consensus 432 ly~~ADv~vvtS~~eGma--~-----~~~~-~g~lVlSe~~G~--~~~l-~~allVnP~d~~~~A~ai~~aL~m~~~er~ 500 (831)
+|+.||++|+||..|++. . +... +.|+|+|...|. .+.+ .+|++++|.|++++|++|.++++++ +++.
T Consensus 300 ~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~~~G~~~~~~d~~~la~~i~~l~~~~-~~~~ 378 (412)
T PRK10307 300 LLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVEGIGVCVEPESVEALVAAIAALARQA-LLRP 378 (412)
T ss_pred HHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHhCCcEEeCCCCHHHHHHHHHHHHhCH-HHHH
Confidence 999999999999988731 0 1122 457777777663 2333 6899999999999999999998754 5555
Q ss_pred HHHHHHhhhhc-cCCHHHHHHHHHHHHHHH
Q 044635 501 LRHEKHYRYVS-THDVGYWARSFLQDLERT 529 (831)
Q Consensus 501 ~r~~~~~~~v~-~~~~~~W~~~~l~~l~~~ 529 (831)
...++.++++. .+++...++++++.+.+.
T Consensus 379 ~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~ 408 (412)
T PRK10307 379 KLGTVAREYAERTLDKENVLRQFIADIRGL 408 (412)
T ss_pred HHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 56667777775 689999999998887764
|
|
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.5e-16 Score=178.43 Aligned_cols=205 Identities=12% Similarity=0.124 Sum_probs=146.7
Q ss_pred EEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 044635 300 VSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQ 379 (831)
Q Consensus 300 ~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvq 379 (831)
.++.++|+|||.+.|.+... ......++.+...++.+|+++||+++.||+..+++|+..+++++|+...++.|++
T Consensus 160 ~~~~vi~ngvd~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i 234 (374)
T TIGR03088 160 AKIHQIYNGVDTERFHPSRG-----DRSPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVI 234 (374)
T ss_pred hhEEEeccCccccccCCCcc-----chhhhhHhhcCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEE
Confidence 45678999999987753211 1111122223245688999999999999999999999999999987666788999
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCC---CCCCC-C
Q 044635 380 IANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSE---PSSPK-K 455 (831)
Q Consensus 380 ig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma---~~~~~-~ 455 (831)
+|. |+..+++ ++.+.+. +....+++.|. .+++..+|+.||++|+||..||+. .+++. +
T Consensus 235 ~G~-----g~~~~~~----~~~~~~~-------~~~~~v~~~g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G 296 (374)
T TIGR03088 235 VGD-----GPARGAC----EQMVRAA-------GLAHLVWLPGE--RDDVPALMQALDLFVLPSLAEGISNTILEAMASG 296 (374)
T ss_pred ecC-----CchHHHH----HHHHHHc-------CCcceEEEcCC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHcC
Confidence 983 3333333 3443332 23345666664 568999999999999999999982 12222 4
Q ss_pred ceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHHHH
Q 044635 456 SMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYV-STHDVGYWARSFLQDLER 528 (831)
Q Consensus 456 g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 528 (831)
.|+|+|..+|..+.+ .+|++++|.|++++|++|.++++. ++++....++.++++ ..+++...++++.+-+.+
T Consensus 297 ~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 297 LPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSD-PAARRAHGAAGRARAEQQFSINAMVAAYAGLYDQ 372 (374)
T ss_pred CCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 577777877777766 358999999999999999999874 445555566677776 578888888877665543
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.8e-16 Score=183.79 Aligned_cols=336 Identities=11% Similarity=0.105 Sum_probs=196.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCC----ChHHh-hcCC------
Q 044635 178 SLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFP----SSEIY-KTLP------ 246 (831)
Q Consensus 178 ~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP----~~e~f-~~lp------ 246 (831)
+.|.....++...++.+........|+|..|.+.=-++...+.++. +++..+..|+.=. .+..+ ....
T Consensus 362 ~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~l-gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~ 440 (784)
T TIGR02470 362 EIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKL-GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFS 440 (784)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhc-CCCEEEECCcchhhcccccccccccchhHHHhh
Confidence 4566666666666666654443223899998766556776776655 6888888885411 11100 0010
Q ss_pred Ch-HHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCee-cccCceeeEEEcC---EEEEEEEeecccChHHHHHhhCCc
Q 044635 247 IR-EEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTY-ESKRGYIGLEYYG---RTVSIKILPVGIHMGQLQSVLSLP 321 (831)
Q Consensus 247 ~r-~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~-~~~~~~~~~~~~g---r~~~i~v~P~GId~~~~~~~~~~~ 321 (831)
.+ +.=+..|-.||.|.-.|++-...-.+.+.. .+... -...+...+ .+| ...++.++|+|+|+..|.+.....
T Consensus 441 ~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~q-Y~s~~~ft~p~Ly~v-vnGid~~~~Ki~VVpPGVD~~iF~P~~~~~ 518 (784)
T TIGR02470 441 CQFTADLIAMNAADFIITSTYQEIAGTKDSVGQ-YESHQAFTMPGLYRV-VHGIDVFDPKFNIVSPGADESIYFPYSDKE 518 (784)
T ss_pred hhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhh-hhhcccccccceeee-ecCccCCcCCeEEECCCcChhhcCCCCchh
Confidence 01 001256667999987775332211111100 00000 000011111 111 123788999999999886432211
Q ss_pred ch-HHHH----------HHHHHHhc---cCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCC-
Q 044635 322 GT-EAKV----------SELIKQFH---DQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARG- 386 (831)
Q Consensus 322 ~~-~~~~----------~~lr~~~~---~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~- 386 (831)
.. .... ...++.+| .+++++|++|||+++.||+..+++||.++.+..+ .+.||+||.+...
T Consensus 519 ~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~----~~~LVIVGGg~~~~ 594 (784)
T TIGR02470 519 KRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRE----LVNLVVVAGKLDAK 594 (784)
T ss_pred hhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCC----CeEEEEEeCCcccc
Confidence 00 0000 12234554 3578999999999999999999999987644333 4558989864321
Q ss_pred --CchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHH-H---cCEeEECCCccCCC---CCCCC-Cc
Q 044635 387 --RGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYV-V---AECCLVTAVRDGSE---PSSPK-KS 456 (831)
Q Consensus 387 --~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~-~---ADv~vvtS~~eGma---~~~~~-~g 456 (831)
...+..+..+++.+++.+.+ -.+ .|.++....+..++..+|+ + +||||+||.+|||+ .+++. +.
T Consensus 595 ~s~d~ee~~~i~~L~~la~~~g----L~g--~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGl 668 (784)
T TIGR02470 595 ESKDREEQAEIEKMHNLIDQYQ----LHG--QIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGL 668 (784)
T ss_pred cccchhHHHHHHHHHHHHHHhC----CCC--eEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCC
Confidence 11122223455666665533 222 3554432345666667776 2 46999999999982 13333 45
Q ss_pred eEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhc---CCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHH
Q 044635 457 MLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALE---MADQEKQLRHEKHYRYV-STHDVGYWARSFLQDL 526 (831)
Q Consensus 457 ~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l 526 (831)
|+|+|..+|..+.+ .+|++|+|.|++++|++|.++++ ..++.+....+..++++ +.+++...+++++.-+
T Consensus 669 PVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 669 PTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred CEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 88888888888877 36899999999999999999874 24445555555666666 6688888888776544
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.4e-16 Score=174.45 Aligned_cols=270 Identities=17% Similarity=0.100 Sum_probs=179.4
Q ss_pred HHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccC----CChHHhhcCCChHHHHH-HHhcCCeEeecCHHh
Q 044635 194 IMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPF----PSSEIYKTLPIREEILR-ALLNSDLIGFHTFDY 268 (831)
Q Consensus 194 i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~Pf----P~~e~f~~lp~r~eil~-~ll~~dligf~t~~~ 268 (831)
+.+..+| |+|++|+.+..+....+. +..++|+.+.+|.-. +.............+.+ .+-.+|.|-+.+...
T Consensus 77 ~~~~~~~--dvvh~~~~~~~~~~~~~~-~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 77 LLRRHRP--DLVHAHFGFDGVYALPLA-RRLGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred HHHhhCC--CEEEeccCchHHHHHHHH-HHcCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHH
Confidence 4455566 899999766444333333 334688888888421 11111111001122222 234578888887655
Q ss_pred HHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCc
Q 044635 269 ARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDM 348 (831)
Q Consensus 269 ~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRl 348 (831)
.+.+... | ....++.++|+|+|.+.+.+.. . ..+++.++++||+
T Consensus 154 ~~~~~~~-----~---------------~~~~~i~vi~~g~d~~~~~~~~--------------~--~~~~~~i~~~G~~ 197 (367)
T cd05844 154 RDRLLAL-----G---------------FPPEKVHVHPIGVDTAKFTPAT--------------P--ARRPPRILFVGRF 197 (367)
T ss_pred HHHHHHc-----C---------------CCHHHeEEecCCCCHHhcCCCC--------------C--CCCCcEEEEEEee
Confidence 5544421 1 1223567899999987764210 0 1456789999999
Q ss_pred ccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHH
Q 044635 349 DIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYE 428 (831)
Q Consensus 349 d~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~e 428 (831)
.+.||+..+++|+..+.+++|+++ |+++|. ++. .++++.++++. ++.+.+.+.+.++.++
T Consensus 198 ~~~K~~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~----~~~~~~~~~~~-------~~~~~v~~~g~~~~~~ 257 (367)
T cd05844 198 VEKKGPLLLLEAFARLARRVPEVR----LVIIGD-----GPL----LAALEALARAL-------GLGGRVTFLGAQPHAE 257 (367)
T ss_pred ccccChHHHHHHHHHHHHhCCCeE----EEEEeC-----chH----HHHHHHHHHHc-------CCCCeEEECCCCCHHH
Confidence 999999999999999998888765 888883 333 23444444442 1223455677899999
Q ss_pred HHHHHHHcCEeEECCC------ccCCCC---CCC-CCceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCC
Q 044635 429 RIAYYVVAECCLVTAV------RDGSEP---SSP-KKSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMA 495 (831)
Q Consensus 429 l~aly~~ADv~vvtS~------~eGma~---~~~-~~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~ 495 (831)
+..+|+.||++++||. .||+.. ++. .+.|+|+|...|..+.+ .+|++++|.|+++++++|.++++.+
T Consensus 258 l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~ 337 (367)
T cd05844 258 VRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEGDVAALAAALGRLLADP 337 (367)
T ss_pred HHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECCCCHHHHHHHHHHHHcCH
Confidence 9999999999999997 477721 121 25688888888877766 4689999999999999999998743
Q ss_pred HHHHHHHHHHHhhhh-ccCCHHHHHHHHH
Q 044635 496 DQEKQLRHEKHYRYV-STHDVGYWARSFL 523 (831)
Q Consensus 496 ~~er~~r~~~~~~~v-~~~~~~~W~~~~l 523 (831)
+.+.....+.++++ ..+++..+++++.
T Consensus 338 -~~~~~~~~~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 338 -DLRARMGAAGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred -HHHHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 44555556667766 5688888887664
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.5e-16 Score=183.93 Aligned_cols=331 Identities=13% Similarity=0.116 Sum_probs=194.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEecc-----------CCCh-HHhhc
Q 044635 177 RSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSP-----------FPSS-EIYKT 244 (831)
Q Consensus 177 ~~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~P-----------fP~~-e~f~~ 244 (831)
.+.|..-.+++...++.+........|+|.-|.+.=-++...|++++ ++|..+..|+- |... +-|+.
T Consensus 384 e~l~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~l-gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~ 462 (815)
T PLN00142 384 FDVWPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKFDDKYHF 462 (815)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHh-CCCEEEEcccchhhhccccCCcccccchhhhh
Confidence 45677777777777776654443123899999555556666776665 78999999942 2111 11111
Q ss_pred -CCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCc---------eeeEEEcCEEEEEEEeecccChHHH
Q 044635 245 -LPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRG---------YIGLEYYGRTVSIKILPVGIHMGQL 314 (831)
Q Consensus 245 -lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~---------~~~~~~~gr~~~i~v~P~GId~~~~ 314 (831)
+-...|. ..|-.||.|.-.|+.-....-..+. .|.+..+ ..+++++ .-++.++|+|+|...|
T Consensus 463 ~~r~~aE~-~a~~~Ad~IIasT~qEi~g~~~~i~-----qy~sh~~f~~p~L~rvv~GId~~--~~ki~VVppGvD~~~F 534 (815)
T PLN00142 463 SCQFTADL-IAMNHADFIITSTYQEIAGSKDTVG-----QYESHTAFTLPGLYRVVHGIDVF--DPKFNIVSPGADMSIY 534 (815)
T ss_pred hhchHHHH-HHHHhhhHHHhCcHHHHhcccchhh-----hhhcccccccchhhhhhcccccc--ccCeeEECCCCChhhc
Confidence 0111122 2555677666554332211000000 0000000 0011111 2278889999999988
Q ss_pred HHhhCCc--------chHHH---HHHHHHHhc---cCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEE
Q 044635 315 QSVLSLP--------GTEAK---VSELIKQFH---DQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQI 380 (831)
Q Consensus 315 ~~~~~~~--------~~~~~---~~~lr~~~~---~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqi 380 (831)
.+..... ..... ....++.++ ..++++|++|||+++.||+..+++||.++.+..+++ .|++|
T Consensus 535 ~P~~~~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~----~LVIV 610 (815)
T PLN00142 535 FPYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELV----NLVVV 610 (815)
T ss_pred CCCChHHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCc----EEEEE
Confidence 6321100 00000 001123333 245789999999999999999999999886665554 49989
Q ss_pred ecCC-CCCchhHH--HHHHHHHHHHHHHhccCCCCCCccEEEec---CCCCHHHHHHHHH-HcCEeEECCCccCCC---C
Q 044635 381 ANPA-RGRGKDVK--EVQAETYSTVERINQTFGKPGYDPVVLID---EPLKFYERIAYYV-VAECCLVTAVRDGSE---P 450 (831)
Q Consensus 381 g~p~-r~~~~~~~--~l~~~i~~lv~~IN~~~g~~~~~pv~~~~---~~v~~~el~aly~-~ADv~vvtS~~eGma---~ 450 (831)
|.+. .....+.+ +..+++.+++.+.+ ..+ .|.++. +..+..+++.+|+ ++|+||+||.+|||. .
T Consensus 611 Ggg~d~~~s~d~ee~~el~~L~~La~~lg----L~~--~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvL 684 (815)
T PLN00142 611 GGFIDPSKSKDREEIAEIKKMHSLIEKYN----LKG--QFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVV 684 (815)
T ss_pred ECCccccccccHHHHHHHHHHHHHHHHcC----CCC--cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHH
Confidence 8541 11111111 12244555555533 222 255443 2455678888777 579999999999982 1
Q ss_pred CCCC-CceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhc---CCHHHHHHHHHHHhhhh-ccCCHHHHHHHH
Q 044635 451 SSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALE---MADQEKQLRHEKHYRYV-STHDVGYWARSF 522 (831)
Q Consensus 451 ~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~W~~~~ 522 (831)
+++. +.|+|+|..+|..+.+ .+|++|+|.|++++|++|.++|. .+++.+....+..++.+ +.+++...++++
T Consensus 685 EAMA~GlPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rl 764 (815)
T PLN00142 685 EAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERL 764 (815)
T ss_pred HHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 3333 4588888888888777 36899999999999999987753 34555555566667776 668888888877
Q ss_pred HHHH
Q 044635 523 LQDL 526 (831)
Q Consensus 523 l~~l 526 (831)
++-.
T Consensus 765 l~L~ 768 (815)
T PLN00142 765 LTLG 768 (815)
T ss_pred HHHH
Confidence 7643
|
|
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.4e-16 Score=172.51 Aligned_cols=266 Identities=15% Similarity=0.186 Sum_probs=181.4
Q ss_pred HHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHH
Q 044635 196 EVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSC 275 (831)
Q Consensus 196 ~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~ 275 (831)
+..++ |+|.+|..+...+..++.+ ..++|+.+.+|-.++.... ...+ +..+|.+.+.+....+.+..
T Consensus 75 ~~~~~--dii~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~------~~~~---~~~~~~vi~~s~~~~~~~~~- 141 (355)
T cd03819 75 REEKV--DIVHARSRAPAWSAYLAAR-RTRPPFVTTVHGFYSVNFR------YNAI---MARGDRVIAVSNFIADHIRE- 141 (355)
T ss_pred HHcCC--CEEEECCCchhHHHHHHHH-hcCCCEEEEeCCchhhHHH------HHHH---HHhcCEEEEeCHHHHHHHHH-
Confidence 33454 8999998776555554443 3478999999976654431 2222 34588888777655544431
Q ss_pred HHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccccCH
Q 044635 276 CSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIFKGI 354 (831)
Q Consensus 276 ~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~KGi 354 (831)
..+. ...++.++|+|+|...|...... ......++++++ ..++++++++||+.+.||+
T Consensus 142 ---~~~~---------------~~~k~~~i~ngi~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~ 200 (355)
T cd03819 142 ---NYGV---------------DPDRIRVIPRGVDLDRFDPGAVP---PERILALAREWPLPKGKPVILLPGRLTRWKGQ 200 (355)
T ss_pred ---hcCC---------------ChhhEEEecCCccccccCccccc---hHHHHHHHHHcCCCCCceEEEEeeccccccCH
Confidence 1111 22467789999999887532221 122233666765 5678899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHH
Q 044635 355 SLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYV 434 (831)
Q Consensus 355 ~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~ 434 (831)
..+++|+..+.+++++++ |+++|... ..+.+.+++.+.+.+.+ ..+-+.+.+. .+++..+|+
T Consensus 201 ~~li~~~~~l~~~~~~~~----l~ivG~~~-----~~~~~~~~~~~~~~~~~-------~~~~v~~~g~--~~~~~~~l~ 262 (355)
T cd03819 201 EVFIEALARLKKDDPDVH----LLIVGDAQ-----GRRFYYAELLELIKRLG-------LQDRVTFVGH--CSDMPAAYA 262 (355)
T ss_pred HHHHHHHHHHHhcCCCeE----EEEEECCc-----ccchHHHHHHHHHHHcC-------CcceEEEcCC--cccHHHHHH
Confidence 999999999988767655 88888432 22344455554444422 2122334444 678999999
Q ss_pred HcCEeEECC-CccCCCC---CCCC-CceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 044635 435 VAECCLVTA-VRDGSEP---SSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKH 506 (831)
Q Consensus 435 ~ADv~vvtS-~~eGma~---~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~ 506 (831)
.||++++|| ..||+.. ++.. +.|+|++...|..+.+ .+|++++|.|+++++++|..++..+++++....++.
T Consensus 263 ~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a 342 (355)
T cd03819 263 LADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKA 342 (355)
T ss_pred hCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHH
Confidence 999999999 7888821 2222 4577888776666656 258999999999999999988887888887777777
Q ss_pred hhhhccC
Q 044635 507 YRYVSTH 513 (831)
Q Consensus 507 ~~~v~~~ 513 (831)
++++.++
T Consensus 343 ~~~~~~~ 349 (355)
T cd03819 343 RMCVETL 349 (355)
T ss_pred HHHHHHh
Confidence 7777554
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.4e-15 Score=169.82 Aligned_cols=283 Identities=12% Similarity=0.077 Sum_probs=185.5
Q ss_pred HHHHHHHHHHHcCCCCCEEEEeCccccchHHHHHhhcC---CCeEEEEEeccCCChHHhhcCCC-hHHHHHHHhcCCeEe
Q 044635 187 NKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFN---RVKLGFFLHSPFPSSEIYKTLPI-REEILRALLNSDLIG 262 (831)
Q Consensus 187 N~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~---~~~i~~flH~PfP~~e~f~~lp~-r~eil~~ll~~dlig 262 (831)
++.+.+.+ +..+| |+|.+|.+....++..+..+.. +.++.+.+|-.-. .....-+. +.-+...+-.+|.|.
T Consensus 73 ~~~l~~~i-~~~~~--divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~--~~~~~~~~~~~~~~~~~~~~d~ii 147 (371)
T cd04962 73 ASKIAEVA-KRYKL--DLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDI--TLVGQDPSFQPATRFSIEKSDGVT 147 (371)
T ss_pred HHHHHHHH-hcCCc--cEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCcc--ccccccccchHHHHHHHhhCCEEE
Confidence 34454444 44455 8999998776566666544322 6788888884211 01111121 222334555789999
Q ss_pred ecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEE
Q 044635 263 FHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVM 341 (831)
Q Consensus 263 f~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~i 341 (831)
..+....+.+...+ +..-++.++|+|+|...+.... ....+++++ ..++++
T Consensus 148 ~~s~~~~~~~~~~~--------------------~~~~~i~vi~n~~~~~~~~~~~--------~~~~~~~~~~~~~~~~ 199 (371)
T cd04962 148 AVSESLRQETYELF--------------------DITKEIEVIPNFVDEDRFRPKP--------DEALKRRLGAPEGEKV 199 (371)
T ss_pred EcCHHHHHHHHHhc--------------------CCcCCEEEecCCcCHhhcCCCc--------hHHHHHhcCCCCCCeE
Confidence 98887666554311 1122567899999987764211 123445565 567899
Q ss_pred EEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCcc-EEEe
Q 044635 342 LLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDP-VVLI 420 (831)
Q Consensus 342 il~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~p-v~~~ 420 (831)
++++||+.+.||+..+++|++++.++ ++++ |+++|. +++..++++ ++.+.+ ..+ |.+
T Consensus 200 il~~g~l~~~K~~~~li~a~~~l~~~-~~~~----l~i~G~-----g~~~~~~~~----~~~~~~-------~~~~v~~- 257 (371)
T cd04962 200 LIHISNFRPVKRIDDVIRIFAKVRKE-VPAR----LLLVGD-----GPERSPAER----LARELG-------LQDDVLF- 257 (371)
T ss_pred EEEecccccccCHHHHHHHHHHHHhc-CCce----EEEEcC-----CcCHHHHHH----HHHHcC-------CCceEEE-
Confidence 99999999999999999999988655 3344 888873 333333333 333322 222 444
Q ss_pred cCCCCHHHHHHHHHHcCEeEECCCccCCCC---CCC-CCceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhc
Q 044635 421 DEPLKFYERIAYYVVAECCLVTAVRDGSEP---SSP-KKSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALE 493 (831)
Q Consensus 421 ~~~v~~~el~aly~~ADv~vvtS~~eGma~---~~~-~~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~ 493 (831)
.+. .+++..+|+.||++|+||..||+.. ++. .+.|+|+|+..|..+.+ .+|++++|.|++++|++|.++++
T Consensus 258 ~g~--~~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~ 335 (371)
T cd04962 258 LGK--QDHVEELLSIADLFLLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLE 335 (371)
T ss_pred ecC--cccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHh
Confidence 444 3579999999999999999999821 222 25588888888877766 35899999999999999999997
Q ss_pred CCHHHHHHHHHHHhhh-hccCCHHHHHHHHHHHHH
Q 044635 494 MADQEKQLRHEKHYRY-VSTHDVGYWARSFLQDLE 527 (831)
Q Consensus 494 m~~~er~~r~~~~~~~-v~~~~~~~W~~~~l~~l~ 527 (831)
.+ +++....+++++. ...+++...++++++-++
T Consensus 336 ~~-~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 369 (371)
T cd04962 336 DD-ELWQEFSRAARNRAAERFDSERIVPQYEALYR 369 (371)
T ss_pred CH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 44 4444445556666 567888888887776554
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.8e-15 Score=167.42 Aligned_cols=270 Identities=16% Similarity=0.155 Sum_probs=185.7
Q ss_pred CCEEEEeC-ccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCC--------hHHH-HHHHhcCCeEeecCHHhHHH
Q 044635 202 DDFVWVHD-YHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPI--------REEI-LRALLNSDLIGFHTFDYARH 271 (831)
Q Consensus 202 ~d~vwvhD-yhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~--------r~ei-l~~ll~~dligf~t~~~~~~ 271 (831)
-|+|++|. ..+..++....++..+.++.+.+|-.||.......... ...+ -..+-.+|.+-+.+...++.
T Consensus 100 ~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~ 179 (394)
T cd03794 100 PDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGMREY 179 (394)
T ss_pred CCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECHHHHHH
Confidence 38999998 44555666665666689999999998875533221111 1111 22345689999998877776
Q ss_pred HHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCccc
Q 044635 272 FLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDI 350 (831)
Q Consensus 272 Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~ 350 (831)
+.. .+ ....++.++|+|++...+...... .. +.+.. ..++.+++++||+.+
T Consensus 180 ~~~-----~~---------------~~~~~~~~i~~~~~~~~~~~~~~~----~~----~~~~~~~~~~~~i~~~G~~~~ 231 (394)
T cd03794 180 LVR-----RG---------------VPPEKISVIPNGVDLELFKPPPAD----ES----LRKELGLDDKFVVLYAGNIGR 231 (394)
T ss_pred HHh-----cC---------------CCcCceEEcCCCCCHHHcCCccch----hh----hhhccCCCCcEEEEEecCccc
Confidence 651 01 123467889999998876532110 11 22222 467889999999999
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHH
Q 044635 351 FKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERI 430 (831)
Q Consensus 351 ~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~ 430 (831)
.||+..+++|+.++.+. |+++ |+++|. ++....+++.+. . .+...|+++ +.++.+++.
T Consensus 232 ~k~~~~l~~~~~~l~~~-~~~~----l~i~G~-----~~~~~~~~~~~~----~-------~~~~~v~~~-g~~~~~~~~ 289 (394)
T cd03794 232 AQGLDTLLEAAALLKDR-PDIR----FLIVGD-----GPEKEELKELAK----A-------LGLDNVTFL-GRVPKEELP 289 (394)
T ss_pred ccCHHHHHHHHHHHhhc-CCeE----EEEeCC-----cccHHHHHHHHH----H-------cCCCcEEEe-CCCChHHHH
Confidence 99999999999998776 6554 888873 333333333211 1 122346665 489999999
Q ss_pred HHHHHcCEeEECCCccCC---C-----CCCC-CCceEEEecccccccccC---CCceeCCCCHHHHHHHHHHHhcCCHHH
Q 044635 431 AYYVVAECCLVTAVRDGS---E-----PSSP-KKSMLVVSEFIGCSPSLS---GAIRVNPWNIDAVSDAMDSALEMADQE 498 (831)
Q Consensus 431 aly~~ADv~vvtS~~eGm---a-----~~~~-~~g~lVlSe~~G~~~~l~---~allVnP~d~~~~A~ai~~aL~m~~~e 498 (831)
++|+.||++++||..|++ + .++. .+.|+|++...|..+.+. +|+++++.|+++++++|.++++. +++
T Consensus 290 ~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~-~~~ 368 (394)
T cd03794 290 ELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDD-PEE 368 (394)
T ss_pred HHHHhhCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhC-hHH
Confidence 999999999999998864 1 1222 255888888888777773 58999999999999999999954 455
Q ss_pred HHHHHHHHhhhhc-cCCHHHHHHHH
Q 044635 499 KQLRHEKHYRYVS-THDVGYWARSF 522 (831)
Q Consensus 499 r~~r~~~~~~~v~-~~~~~~W~~~~ 522 (831)
+....++.++++. .+++..+++++
T Consensus 369 ~~~~~~~~~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 369 RAEMGENGRRYVEEKFSREKLAERL 393 (394)
T ss_pred HHHHHHHHHHHHHHhhcHHHHHHhc
Confidence 5566666777776 78888888765
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.72 E-value=6.9e-16 Score=171.12 Aligned_cols=258 Identities=12% Similarity=0.060 Sum_probs=168.1
Q ss_pred HHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHH-HHHHhcCCeEeecCHHhHHHHHH
Q 044635 196 EVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEI-LRALLNSDLIGFHTFDYARHFLS 274 (831)
Q Consensus 196 ~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~ei-l~~ll~~dligf~t~~~~~~Fl~ 274 (831)
+..++ |+|.+|..++..++.++.++.....+.+..|..+...+.+........+ ...+..+|.+-..+....+.+..
T Consensus 77 ~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~ 154 (358)
T cd03812 77 KKNKY--DIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWLFG 154 (358)
T ss_pred hcCCC--CEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHHHh
Confidence 34444 8999999987777777766655556677788776554433322211011 11223456666555544433321
Q ss_pred HHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccccC
Q 044635 275 CCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIFKG 353 (831)
Q Consensus 275 ~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~KG 353 (831)
. ....++.++|+|+|...+.... ... .. +++++ ..++.+|+++||+++.||
T Consensus 155 ~---------------------~~~~~~~vi~ngvd~~~~~~~~---~~~---~~-~~~~~~~~~~~~i~~vGr~~~~Kg 206 (358)
T cd03812 155 K---------------------VKNKKFKVIPNGIDLEKFIFNE---EIR---KK-RRELGILEDKFVIGHVGRFSEQKN 206 (358)
T ss_pred C---------------------CCcccEEEEeccCcHHHcCCCc---hhh---hH-HHHcCCCCCCEEEEEEeccccccC
Confidence 0 1124678899999998774321 111 11 33444 567899999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHH
Q 044635 354 ISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYY 433 (831)
Q Consensus 354 i~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly 433 (831)
++.+++|+..+.+++|+++ |+++|. ++..+.+++.+ ++. +..+.+.+.+. .+++..+|
T Consensus 207 ~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~~~~~~~~----~~~-------~~~~~v~~~g~--~~~~~~~~ 264 (358)
T cd03812 207 HEFLIEIFAELLKKNPNAK----LLLVGD-----GELEEEIKKKV----KEL-------GLEDKVIFLGV--RNDVPELL 264 (358)
T ss_pred hHHHHHHHHHHHHhCCCeE----EEEEeC-----CchHHHHHHHH----Hhc-------CCCCcEEEecc--cCCHHHHH
Confidence 9999999999999998766 888883 34433444333 321 22233344554 67899999
Q ss_pred HHcCEeEECCCccCCC---CCCCC-CceEEEecccccccccC--CCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHH
Q 044635 434 VVAECCLVTAVRDGSE---PSSPK-KSMLVVSEFIGCSPSLS--GAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEK 505 (831)
Q Consensus 434 ~~ADv~vvtS~~eGma---~~~~~-~g~lVlSe~~G~~~~l~--~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~ 505 (831)
+.||++|+||..||+. .+++. +.|+|+|..+|..+.+. ++++..+.+++++|++|.++++.++.++..+..+
T Consensus 265 ~~adi~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a~~i~~l~~~~~~~~~~~~~~ 342 (358)
T cd03812 265 QAMDVFLFPSLYEGLPLVLIEAQASGLPCILSDTITKEVDLTDLVKFLSLDESPEIWAEEILKLKSEDRRERSSESIK 342 (358)
T ss_pred HhcCEEEecccccCCCHHHHHHHHhCCCEEEEcCCchhhhhccCccEEeCCCCHHHHHHHHHHHHhCcchhhhhhhhh
Confidence 9999999999999982 12222 55888888888777773 3455555678999999999999887655444333
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.1e-16 Score=175.98 Aligned_cols=268 Identities=15% Similarity=0.110 Sum_probs=172.9
Q ss_pred CCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCCh-------------H--HH------------
Q 044635 199 NPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIR-------------E--EI------------ 251 (831)
Q Consensus 199 ~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r-------------~--ei------------ 251 (831)
.| | |||.+ +-+..+..+.+.++++|+++.+|-|.-+++.+..+-.+ . .+
T Consensus 107 ~p--D-v~i~~-~g~~~~~~~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~~ 182 (419)
T cd03806 107 VP--D-IFIDT-MGYPFTYPLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAFL 182 (419)
T ss_pred CC--C-EEEEc-CCcccHHHHHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHHHHH
Confidence 56 6 55543 33333344556677999999999443345554322111 1 11
Q ss_pred -HHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHH
Q 044635 252 -LRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSEL 330 (831)
Q Consensus 252 -l~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~l 330 (831)
.-.+-.||.|-..+..-.+++.+. . +...++.++|+|+|.+.|.....
T Consensus 183 ~~~~~~~aD~ii~~S~~~~~~~~~~----~----------------~~~~~~~vi~~gvd~~~~~~~~~----------- 231 (419)
T cd03806 183 YGLAGSFADVVMVNSTWTRNHIRSL----W----------------KRNTKPSIVYPPCDVEELLKLPL----------- 231 (419)
T ss_pred HHHHhhcCCEEEECCHHHHHHHHHH----h----------------CcCCCcEEEcCCCCHHHhccccc-----------
Confidence 112336788877776555544321 1 11125678899999987742210
Q ss_pred HHHhccCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCC-CcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccC
Q 044635 331 IKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQ-GKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTF 409 (831)
Q Consensus 331 r~~~~~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~-~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~ 409 (831)
..- .++++|+++||+.+.||+..+|+||.++.+++|+.. .++.|+++|.... .+..++.+++++++++.+
T Consensus 232 -~~~--~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~---~~~~~~~~~L~~~~~~l~--- 302 (419)
T cd03806 232 -DEK--TRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRN---EDDEKRVEDLKLLAKELG--- 302 (419)
T ss_pred -ccc--cCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCC---cccHHHHHHHHHHHHHhC---
Confidence 011 456799999999999999999999999999887621 2466999985321 111235566666666543
Q ss_pred CCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCC---CCCCCCc-eEEEeccccccccc-C------CCceeCC
Q 044635 410 GKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSE---PSSPKKS-MLVVSEFIGCSPSL-S------GAIRVNP 478 (831)
Q Consensus 410 g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma---~~~~~~g-~lVlSe~~G~~~~l-~------~allVnP 478 (831)
....+.|.+.++.+++..+|+.||++|.||..|||. .+++..| |+|++..+|..+++ . +|++++
T Consensus 303 ----l~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~- 377 (419)
T cd03806 303 ----LEDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS- 377 (419)
T ss_pred ----CCCeEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC-
Confidence 223445567899999999999999999999999882 2333344 67777766765433 3 478874
Q ss_pred CCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHH
Q 044635 479 WNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVG 516 (831)
Q Consensus 479 ~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~ 516 (831)
|++++|++|.++++++++++..+.+..++...+++..
T Consensus 378 -d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~ 414 (419)
T cd03806 378 -TAEEYAEAIEKILSLSEEERLRIRRAARSSVKRFSDE 414 (419)
T ss_pred -CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHH
Confidence 9999999999999998776665444444444555543
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.71 E-value=6.9e-16 Score=179.02 Aligned_cols=272 Identities=14% Similarity=0.107 Sum_probs=178.9
Q ss_pred CCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCCh---HHhhc---CCChHHH--------H-HHHhcCCeEeec
Q 044635 200 PEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSS---EIYKT---LPIREEI--------L-RALLNSDLIGFH 264 (831)
Q Consensus 200 ~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~---e~f~~---lp~r~ei--------l-~~ll~~dligf~ 264 (831)
++-|+|++|......++..+.++..++|+.+..|--+|.. +++.. .+....+ . ...-.||.|...
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~Ii~~ 251 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAADRITTL 251 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCCEEEec
Confidence 3459999998766666666656666899999999655421 22211 0000111 1 112245655544
Q ss_pred CHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEe
Q 044635 265 TFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLG 344 (831)
Q Consensus 265 t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~ 344 (831)
+....+ .+. .++....++.++|+|||.+.|..... . .. ..++++|++
T Consensus 252 s~~~~~-~~~-------------------~~g~~~~ki~vIpNgid~~~f~~~~~---------~--~~--~~~~~~i~~ 298 (475)
T cd03813 252 YEGNRE-RQI-------------------EDGADPEKIRVIPNGIDPERFAPARR---------A--RP--EKEPPVVGL 298 (475)
T ss_pred CHHHHH-HHH-------------------HcCCCHHHeEEeCCCcCHHHcCCccc---------c--cc--CCCCcEEEE
Confidence 432221 111 11222346788999999988753211 0 11 256789999
Q ss_pred ccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCC
Q 044635 345 VDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPL 424 (831)
Q Consensus 345 VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v 424 (831)
+||+.+.||+..+++|+..+.++.|+++ |+++|.. ++..++.+++++++++.+. .+.+.+.|
T Consensus 299 vGrl~~~Kg~~~li~a~~~l~~~~p~~~----l~IvG~g-----~~~~~~~~e~~~li~~l~l-------~~~V~f~G-- 360 (475)
T cd03813 299 IGRVVPIKDIKTFIRAAAIVRKKIPDAE----GWVIGPT-----DEDPEYAEECRELVESLGL-------EDNVKFTG-- 360 (475)
T ss_pred EeccccccCHHHHHHHHHHHHHhCCCeE----EEEECCC-----CcChHHHHHHHHHHHHhCC-------CCeEEEcC--
Confidence 9999999999999999999998888766 8888843 2223456677777776542 12334454
Q ss_pred CHHHHHHHHHHcCEeEECCCccCCCC---CCCC-CceEEEeccccccccc-C--------CCceeCCCCHHHHHHHHHHH
Q 044635 425 KFYERIAYYVVAECCLVTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSL-S--------GAIRVNPWNIDAVSDAMDSA 491 (831)
Q Consensus 425 ~~~el~aly~~ADv~vvtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l-~--------~allVnP~d~~~~A~ai~~a 491 (831)
.+++..+|+.||++|+||..||+.. +++. +.|+|+|..+|+.+.+ . +|++++|.|++++|++|.++
T Consensus 361 -~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~l 439 (475)
T cd03813 361 -FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARAILRL 439 (475)
T ss_pred -CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHHHHHH
Confidence 6789999999999999999999821 2222 4577777777777666 3 48999999999999999999
Q ss_pred hcCCHHHHHHHHHHHhhhhcc-CCHHHHHHHHHH
Q 044635 492 LEMADQEKQLRHEKHYRYVST-HDVGYWARSFLQ 524 (831)
Q Consensus 492 L~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~ 524 (831)
++. ++++....+..++++.+ +++...++++.+
T Consensus 440 l~~-~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 440 LKD-PELRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred hcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 984 44555556667777765 455555555443
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.7e-15 Score=164.02 Aligned_cols=280 Identities=17% Similarity=0.134 Sum_probs=191.2
Q ss_pred HHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhh----cCCChHHHHHHHhcCCeEeecCHHhHH
Q 044635 195 MEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYK----TLPIREEILRALLNSDLIGFHTFDYAR 270 (831)
Q Consensus 195 ~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~----~lp~r~eil~~ll~~dligf~t~~~~~ 270 (831)
.+..++ |+|++|+++...+.. +..+.++.++.+.+|-++|...... ...........+-.+|.+-+.+....+
T Consensus 81 ~~~~~~--Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~ 157 (374)
T cd03801 81 LRRERF--DVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATRE 157 (374)
T ss_pred hhhcCC--cEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHHH
Confidence 344444 899999999888776 4455678999999999887543221 111122233444567888888876666
Q ss_pred HHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcc
Q 044635 271 HFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMD 349 (831)
Q Consensus 271 ~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld 349 (831)
.+.+.. .....++.++|+|+|...+.... ...+.... ..+++.++++||++
T Consensus 158 ~~~~~~-------------------~~~~~~~~~i~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~g~~~ 209 (374)
T cd03801 158 ELRELG-------------------GVPPEKITVIPNGVDTERFRPAP---------RAARRRLGIPEDEPVILFVGRLV 209 (374)
T ss_pred HHHhcC-------------------CCCCCcEEEecCcccccccCccc---------hHHHhhcCCcCCCeEEEEecchh
Confidence 554311 01124677899999987764211 12222332 35678999999999
Q ss_pred cccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHH
Q 044635 350 IFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYER 429 (831)
Q Consensus 350 ~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el 429 (831)
+.||+..+++|+..+.+++|+++ |+++| .++....+++ ++.+.+ ..+-+.+.+.++.+|+
T Consensus 210 ~~k~~~~~i~~~~~~~~~~~~~~----l~i~G-----~~~~~~~~~~----~~~~~~-------~~~~v~~~g~~~~~~~ 269 (374)
T cd03801 210 PRKGVDLLLEALAKLRKEYPDVR----LVIVG-----DGPLREELEA----LAAELG-------LGDRVTFLGFVPDEDL 269 (374)
T ss_pred hhcCHHHHHHHHHHHhhhcCCeE----EEEEe-----CcHHHHHHHH----HHHHhC-------CCcceEEEeccChhhH
Confidence 99999999999999988887655 88888 2333333333 332221 1233456678999999
Q ss_pred HHHHHHcCEeEECCCccCCCC---CC-CCCceEEEecccccccccC---CCceeCCCCHHHHHHHHHHHhcCCHHHHHHH
Q 044635 430 IAYYVVAECCLVTAVRDGSEP---SS-PKKSMLVVSEFIGCSPSLS---GAIRVNPWNIDAVSDAMDSALEMADQEKQLR 502 (831)
Q Consensus 430 ~aly~~ADv~vvtS~~eGma~---~~-~~~g~lVlSe~~G~~~~l~---~allVnP~d~~~~A~ai~~aL~m~~~er~~r 502 (831)
..+|+.||++++|+..||+.. ++ ..+.|+|++...|..+.+. .|+++++.|+++++++|.++++.+.. +...
T Consensus 270 ~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~-~~~~ 348 (374)
T cd03801 270 PALYAAADVFVLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDPEL-RRRL 348 (374)
T ss_pred HHHHHhcCEEEecchhccccchHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcChHH-HHHH
Confidence 999999999999999998821 11 2255788888777777663 68999999999999999999986543 3333
Q ss_pred HHHHh-hhhccCCHHHHHHHHHHHH
Q 044635 503 HEKHY-RYVSTHDVGYWARSFLQDL 526 (831)
Q Consensus 503 ~~~~~-~~v~~~~~~~W~~~~l~~l 526 (831)
.+..+ .....+++..+++++++-+
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 349 GEAARERVAERFSWDRVAARTEEVY 373 (374)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHhh
Confidence 44444 5567789999888776643
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.2e-15 Score=181.20 Aligned_cols=272 Identities=11% Similarity=0.078 Sum_probs=167.9
Q ss_pred CEEEEeCccccchHHHHHhhcCCCeEEE-EEeccCC---ChHHhhcCCChHHHHHHHhcCCeEeec--CHHhHHHHHHHH
Q 044635 203 DFVWVHDYHLMVLPTFLRKRFNRVKLGF-FLHSPFP---SSEIYKTLPIREEILRALLNSDLIGFH--TFDYARHFLSCC 276 (831)
Q Consensus 203 d~vwvhDyhL~llp~~lr~~~~~~~i~~-flH~PfP---~~e~f~~lp~r~eil~~ll~~dligf~--t~~~~~~Fl~~~ 276 (831)
|+|.+|.+.-.++..+..+. ..+|+.+ .+|. +| ..+.++. ....+.+.+..++.+.+- +....+.+..
T Consensus 402 DIVH~h~~~a~~lg~lAa~~-~gvPvIv~t~h~-~~~~~~~~~~~~--~~~~l~~~l~~~~~~i~Vs~S~~~~~~l~~-- 475 (694)
T PRK15179 402 SVVHIWQDGSIFACALAALL-AGVPRIVLSVRT-MPPVDRPDRYRV--EYDIIYSELLKMRGVALSSNSQFAAHRYAD-- 475 (694)
T ss_pred cEEEEeCCcHHHHHHHHHHH-cCCCEEEEEeCC-CccccchhHHHH--HHHHHHHHHHhcCCeEEEeCcHHHHHHHHH--
Confidence 89999998877776666543 3455544 4564 22 2221110 011222334444433332 2222223322
Q ss_pred HHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHH
Q 044635 277 SRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISL 356 (831)
Q Consensus 277 ~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~ 356 (831)
.+ +....+|.++|+|||...|.+ .+........++... +.+.++|++|||+++.||+..
T Consensus 476 --~~---------------g~~~~kI~VI~NGVd~~~f~~---~~~~~~~~~~~~~~~-~~~~~vIg~VGRL~~~KG~~~ 534 (694)
T PRK15179 476 --WL---------------GVDERRIPVVYNGLAPLKSVQ---DDACTAMMAQFDART-SDARFTVGTVMRVDDNKRPFL 534 (694)
T ss_pred --Hc---------------CCChhHEEEECCCcCHHhcCC---CchhhHHHHhhcccc-CCCCeEEEEEEeCCccCCHHH
Confidence 11 122347888999999887742 111111112222222 245678999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHc
Q 044635 357 KLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVA 436 (831)
Q Consensus 357 ~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~A 436 (831)
+|+||.++++++|+++ |+++|. |+.. +++++++.+.+ ....+.|.|.. +++..+|+.|
T Consensus 535 LI~A~a~l~~~~p~~~----LvIvG~-----G~~~----~~L~~l~~~lg-------L~~~V~flG~~--~dv~~ll~aa 592 (694)
T PRK15179 535 WVEAAQRFAASHPKVR----FIMVGG-----GPLL----ESVREFAQRLG-------MGERILFTGLS--RRVGYWLTQF 592 (694)
T ss_pred HHHHHHHHHHHCcCeE----EEEEcc-----Ccch----HHHHHHHHHcC-------CCCcEEEcCCc--chHHHHHHhc
Confidence 9999999999999876 998984 3333 34445554432 23455566664 4799999999
Q ss_pred CEeEECCCccCCC---CCCCC-CceEEEeccccccccc---CCCceeCCCCH--HHHHHHHHHHhcCCHHHHHHHHHHHh
Q 044635 437 ECCLVTAVRDGSE---PSSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNI--DAVSDAMDSALEMADQEKQLRHEKHY 507 (831)
Q Consensus 437 Dv~vvtS~~eGma---~~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~--~~~A~ai~~aL~m~~~er~~r~~~~~ 507 (831)
|++|+||.+|||. .+++. +.|+|+|...|..+.+ .+|++|+|.|+ ++++++|.+++........ ..++.+
T Consensus 593 Dv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~~~~~-l~~~ar 671 (694)
T PRK15179 593 NAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCAADPG-IARKAA 671 (694)
T ss_pred CEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChhccHH-HHHHHH
Confidence 9999999999982 12222 4567777777777766 35899998875 6899999888875433222 234556
Q ss_pred hhh-ccCCHHHHHHHHHH
Q 044635 508 RYV-STHDVGYWARSFLQ 524 (831)
Q Consensus 508 ~~v-~~~~~~~W~~~~l~ 524 (831)
+++ .++++...++++++
T Consensus 672 ~~a~~~FS~~~~~~~~~~ 689 (694)
T PRK15179 672 DWASARFSLNQMIASTVR 689 (694)
T ss_pred HHHHHhCCHHHHHHHHHH
Confidence 655 46777776666654
|
|
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.70 E-value=7.1e-16 Score=170.42 Aligned_cols=267 Identities=18% Similarity=0.169 Sum_probs=185.1
Q ss_pred CEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCCh--HHhhc---CCChHHHHHHHhcCCeEeecCHHhHHHHHHHHH
Q 044635 203 DFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSS--EIYKT---LPIREEILRALLNSDLIGFHTFDYARHFLSCCS 277 (831)
Q Consensus 203 d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~--e~f~~---lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~ 277 (831)
|+||+|.+..... +....|+.+.+|-.+|.. +.+.. ...+.-+...+..+|.+.+.+...++.+....
T Consensus 87 Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~- 159 (365)
T cd03809 87 DLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLRYL- 159 (365)
T ss_pred CeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHHHHh-
Confidence 8999998887776 456889999999655422 11111 11234455666778999998877666665421
Q ss_pred HHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccccCHHH
Q 044635 278 RMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIFKGISL 356 (831)
Q Consensus 278 r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~KGi~~ 356 (831)
+. ...++.++|+|+|...+.... . .. +.+.. ..++++|+++||+.+.||+..
T Consensus 160 ---~~---------------~~~~~~vi~~~~~~~~~~~~~----~-~~----~~~~~~~~~~~~i~~~G~~~~~K~~~~ 212 (365)
T cd03809 160 ---GV---------------PPDKIVVIPLGVDPRFRPPPA----E-AE----VLRALYLLPRPYFLYVGTIEPRKNLER 212 (365)
T ss_pred ---Cc---------------CHHHEEeeccccCccccCCCc----h-HH----HHHHhcCCCCCeEEEeCCCccccCHHH
Confidence 10 123567899999987764211 1 11 11222 367889999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHc
Q 044635 357 KLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVA 436 (831)
Q Consensus 357 ~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~A 436 (831)
+++|+..+.+++|+++ |+++|... ........++ .+ . +..+.+.+.+.++.+++..+|+.|
T Consensus 213 ~l~~~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~----~~----~---~~~~~v~~~g~~~~~~~~~~~~~~ 273 (365)
T cd03809 213 LLEAFARLPAKGPDPK----LVIVGKRG----WLNEELLARL----RE----L---GLGDRVRFLGYVSDEELAALYRGA 273 (365)
T ss_pred HHHHHHHHHHhcCCCC----EEEecCCc----cccHHHHHHH----HH----c---CCCCeEEECCCCChhHHHHHHhhh
Confidence 9999999998888655 88888432 1112222222 11 1 223456677899999999999999
Q ss_pred CEeEECCCccCCCC---CCCC-CceEEEeccccccccc-CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhc
Q 044635 437 ECCLVTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSL-SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVS 511 (831)
Q Consensus 437 Dv~vvtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l-~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~ 511 (831)
|++++||..||++. ++.. +.|+|+|+..|..+.+ .+++.++|.|+++++++|.++++ .++.+....+..++.+.
T Consensus 274 d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~l~~-~~~~~~~~~~~~~~~~~ 352 (365)
T cd03809 274 RAFVFPSLYEGFGLPVLEAMACGTPVIASNISSLPEVAGDAALYFDPLDPEALAAAIERLLE-DPALREELRERGLARAK 352 (365)
T ss_pred hhhcccchhccCCCCHHHHhcCCCcEEecCCCCccceecCceeeeCCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH
Confidence 99999999999831 2222 4466666665555555 57899999999999999999986 44555555566677888
Q ss_pred cCCHHHHHHHHH
Q 044635 512 THDVGYWARSFL 523 (831)
Q Consensus 512 ~~~~~~W~~~~l 523 (831)
++++..++++++
T Consensus 353 ~~sw~~~~~~~~ 364 (365)
T cd03809 353 RFSWEKTARRTL 364 (365)
T ss_pred hCCHHHHHHHHh
Confidence 999999998775
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.7e-15 Score=165.49 Aligned_cols=265 Identities=15% Similarity=0.185 Sum_probs=174.4
Q ss_pred HHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChH----------HHHHHHhcCCeEeec
Q 044635 195 MEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIRE----------EILRALLNSDLIGFH 264 (831)
Q Consensus 195 ~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~----------eil~~ll~~dligf~ 264 (831)
.+..+| |+|++|+...+........+..++++.+.+|.+|+. +....+... -....+-.+|.+-+.
T Consensus 80 ~~~~~~--Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~ 155 (374)
T cd03817 80 LKELGP--DIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYED--YTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAP 155 (374)
T ss_pred HhhcCC--CEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHH--HHHHHhcccchhHHHHHHHHHHHHhhhCCEEEec
Confidence 344555 899999875544444444444578999999988863 222222111 111233457888877
Q ss_pred CHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEE
Q 044635 265 TFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLL 343 (831)
Q Consensus 265 t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil 343 (831)
+......+.. . +...++.++|+|+|...+..... ...++.++ ..++++|+
T Consensus 156 s~~~~~~~~~-----~----------------~~~~~~~vi~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~i~ 206 (374)
T cd03817 156 SEKIADLLRE-----Y----------------GVKRPIEVIPTGIDLDRFEPVDG--------DDERRKLGIPEDEPVLL 206 (374)
T ss_pred cHHHHHHHHh-----c----------------CCCCceEEcCCccchhccCccch--------hHHHHhcCCCCCCeEEE
Confidence 7764443321 0 11224788999999877643211 11134444 45678999
Q ss_pred eccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCC
Q 044635 344 GVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEP 423 (831)
Q Consensus 344 ~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~ 423 (831)
++||+.+.||+..+++|+..+.++.|+++ |+++|. ++.. .++.+++.+.+ ..+.+.+.+.
T Consensus 207 ~~G~~~~~k~~~~l~~~~~~~~~~~~~~~----l~i~G~-----~~~~----~~~~~~~~~~~-------~~~~v~~~g~ 266 (374)
T cd03817 207 YVGRLAKEKNIDFLIRAFARLLKEEPDVK----LVIVGD-----GPER----EELEELARELG-------LADRVIFTGF 266 (374)
T ss_pred EEeeeecccCHHHHHHHHHHHHHhCCCeE----EEEEeC-----CchH----HHHHHHHHHcC-------CCCcEEEecc
Confidence 99999999999999999999988767654 888883 3332 33334443322 2234456778
Q ss_pred CCHHHHHHHHHHcCEeEECCCccCCCC---CCCC-CceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCH
Q 044635 424 LKFYERIAYYVVAECCLVTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMAD 496 (831)
Q Consensus 424 v~~~el~aly~~ADv~vvtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~ 496 (831)
++.+++..+|+.||++++||..||+.. ++.. +.|+|++...|..+.+ .+|+++++.|. +++++|.++++++.
T Consensus 267 ~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~ 345 (374)
T cd03817 267 VPREELPDYYKAADLFVFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPE 345 (374)
T ss_pred CChHHHHHHHHHcCEEEecccccCcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHHhChH
Confidence 999999999999999999999998721 2222 4567777766666655 36899999888 99999999998765
Q ss_pred HHHHHHHHHHhhhhccCC
Q 044635 497 QEKQLRHEKHYRYVSTHD 514 (831)
Q Consensus 497 ~er~~r~~~~~~~v~~~~ 514 (831)
. ++...+..++++.+++
T Consensus 346 ~-~~~~~~~~~~~~~~~~ 362 (374)
T cd03817 346 L-RRRLSKNAEESAEKFS 362 (374)
T ss_pred H-HHHHHHHHHHHHHHHH
Confidence 4 3445556666666654
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.9e-15 Score=163.78 Aligned_cols=259 Identities=15% Similarity=0.133 Sum_probs=176.0
Q ss_pred CEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCC
Q 044635 203 DFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGL 282 (831)
Q Consensus 203 d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~ 282 (831)
|+|++|..+...+..++..+....+..+.+|.+-..... ....+.+.+-.+|.+-..+....+.+.+. .
T Consensus 81 Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~vi~~s~~~~~~l~~~----~-- 149 (355)
T cd03799 81 DHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRSP-----DAIDLDEKLARADFVVAISEYNRQQLIRL----L-- 149 (355)
T ss_pred CEEEECCCCchHHHHHHHHHhcCCCEEEEEecccccccC-----chHHHHHHHhhCCEEEECCHHHHHHHHHh----c--
Confidence 899999876666666666666678899999853221111 11234445557999999888777665431 0
Q ss_pred eecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHHH
Q 044635 283 TYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAME 362 (831)
Q Consensus 283 ~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~~ 362 (831)
+....++.++|+|+|...+.... ... ..++..|+++||+.+.||++.+++|++
T Consensus 150 -------------~~~~~~~~vi~~~~d~~~~~~~~------------~~~--~~~~~~i~~~g~~~~~k~~~~l~~~~~ 202 (355)
T cd03799 150 -------------GCDPDKIHVVHCGVDLERFPPRP------------PPP--PGEPLRILSVGRLVEKKGLDYLLEALA 202 (355)
T ss_pred -------------CCCcccEEEEeCCcCHHHcCCcc------------ccc--cCCCeEEEEEeeeccccCHHHHHHHHH
Confidence 12234678899999988774211 011 256778999999999999999999999
Q ss_pred HHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEEC
Q 044635 363 QLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVT 442 (831)
Q Consensus 363 ~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvt 442 (831)
++.+++|+++ |+++|. ++...+ +.+.+.+. ++.+.+.+.+.++.+++.++|+.||++++|
T Consensus 203 ~l~~~~~~~~----l~i~G~-----~~~~~~----~~~~~~~~-------~~~~~v~~~g~~~~~~l~~~~~~adi~l~~ 262 (355)
T cd03799 203 LLKDRGIDFR----LDIVGD-----GPLRDE----LEALIAEL-------GLEDRVTLLGAKSQEEVRELLRAADLFVLP 262 (355)
T ss_pred HHhhcCCCeE----EEEEEC-----CccHHH----HHHHHHHc-------CCCCeEEECCcCChHHHHHHHHhCCEEEec
Confidence 9987766654 888883 233223 33333332 222456677899999999999999999999
Q ss_pred CCc------cCCCC---CCCC-CceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhh
Q 044635 443 AVR------DGSEP---SSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRY 509 (831)
Q Consensus 443 S~~------eGma~---~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~ 509 (831)
|.. ||+.. ++.. +.|+|+|...|..+.+ .+|++++|.|+++++++|.++++.+.. +....+..++.
T Consensus 263 s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~-~~~~~~~a~~~ 341 (355)
T cd03799 263 SVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLLDDPEL-RREMGEAGRAR 341 (355)
T ss_pred ceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHHHHHhCHHH-HHHHHHHHHHH
Confidence 999 99821 2222 4577777765555555 258999999999999999999986543 44444555666
Q ss_pred h-ccCCHHHHHH
Q 044635 510 V-STHDVGYWAR 520 (831)
Q Consensus 510 v-~~~~~~~W~~ 520 (831)
+ ..+++...++
T Consensus 342 ~~~~~s~~~~~~ 353 (355)
T cd03799 342 VEEEFDIRKQAA 353 (355)
T ss_pred HHHhcCHHHHhh
Confidence 5 4466555443
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.8e-15 Score=165.89 Aligned_cols=275 Identities=15% Similarity=0.104 Sum_probs=173.0
Q ss_pred CCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHH---------HHhcCCeEeecCHHhHHHH
Q 044635 202 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILR---------ALLNSDLIGFHTFDYARHF 272 (831)
Q Consensus 202 ~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~---------~ll~~dligf~t~~~~~~F 272 (831)
.|+|.+|+.... ++ +++. ....++.|.+| ||.......-.+...+.+ .+-.+|.|...+......+
T Consensus 95 ~Dvi~~~~~~~~-~~-~~~~-~~~~~~i~~~h--~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~~~ 169 (392)
T cd03805 95 YDVFIVDQVSAC-VP-LLKL-FSPSKILFYCH--FPDQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTASVF 169 (392)
T ss_pred CCEEEEcCcchH-HH-HHHH-hcCCcEEEEEe--cChHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHHHH
Confidence 489998876543 22 2332 22388999999 443322111111111111 1334788777665444433
Q ss_pred HHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccc
Q 044635 273 LSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIF 351 (831)
Q Consensus 273 l~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~ 351 (831)
... ++. .....+.++|+|+|.+.|.+....+ .++... ..++.+|+++||+.+.
T Consensus 170 ~~~----~~~--------------~~~~~~~vi~n~vd~~~~~~~~~~~--------~~~~~~~~~~~~~i~~~grl~~~ 223 (392)
T cd03805 170 KKT----FPS--------------LAKNPREVVYPCVDTDSFESTSEDP--------DPGLLIPKSGKKTFLSINRFERK 223 (392)
T ss_pred HHH----hcc--------------cccCCcceeCCCcCHHHcCcccccc--------cccccccCCCceEEEEEeeeccc
Confidence 321 110 0111235789999998875321110 111112 3678899999999999
Q ss_pred cCHHHHHHHHHHHHHhC---CCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHH-HhccCCCCCCccEEEecCCCCHH
Q 044635 352 KGISLKLLAMEQLLIQH---PEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVER-INQTFGKPGYDPVVLIDEPLKFY 427 (831)
Q Consensus 352 KGi~~~l~A~~~lL~~~---P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~-IN~~~g~~~~~pv~~~~~~v~~~ 427 (831)
||++.+++|++++.++. |+++ |+.+|..... .....++.+++.+++++ .+ ...-+.+.|.++.+
T Consensus 224 Kg~~~ll~a~~~l~~~~~~~~~~~----l~i~G~~~~~-~~~~~~~~~~l~~~~~~~~~-------l~~~V~f~g~~~~~ 291 (392)
T cd03805 224 KNIALAIEAFAILKDKLAEFKNVR----LVIAGGYDPR-VAENVEYLEELQRLAEELLL-------LEDQVIFLPSISDS 291 (392)
T ss_pred CChHHHHHHHHHHHhhcccccCeE----EEEEcCCCCC-CchhHHHHHHHHHHHHHhcC-------CCceEEEeCCCChH
Confidence 99999999999998877 6554 8888854321 12223445566666554 21 22344456789999
Q ss_pred HHHHHHHHcCEeEECCCccCCCC---CCCC-CceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCHHHHH
Q 044635 428 ERIAYYVVAECCLVTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMADQEKQ 500 (831)
Q Consensus 428 el~aly~~ADv~vvtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~~er~ 500 (831)
++..+|+.||++++||..||+.. ++.. +.|+|+|...|..+.+ .+|++++| |++++|++|.++++.++ +++
T Consensus 292 ~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~~-~~~ 369 (392)
T cd03805 292 QKELLLSSARALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDPD-LAD 369 (392)
T ss_pred HHHHHHhhCeEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHHhChH-HHH
Confidence 99999999999999999998821 2333 4577777777766666 25788877 99999999999998664 455
Q ss_pred HHHHHHhhhh-ccCCHHHHHHH
Q 044635 501 LRHEKHYRYV-STHDVGYWARS 521 (831)
Q Consensus 501 ~r~~~~~~~v-~~~~~~~W~~~ 521 (831)
...++.++++ .++++..++++
T Consensus 370 ~~~~~a~~~~~~~~s~~~~~~~ 391 (392)
T cd03805 370 RMGAAGRKRVKEKFSTEAFAER 391 (392)
T ss_pred HHHHHHHHHHHHhcCHHHHhhh
Confidence 5555666665 55777766654
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.8e-15 Score=164.70 Aligned_cols=274 Identities=18% Similarity=0.178 Sum_probs=177.7
Q ss_pred CEEEEeCccccchHH---HHH--hhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHH
Q 044635 203 DFVWVHDYHLMVLPT---FLR--KRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCS 277 (831)
Q Consensus 203 d~vwvhDyhL~llp~---~lr--~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~ 277 (831)
|+|.+|+++-...|. .+. .+..+.|+.+.+|.+.|...... ...-.-..+-.+|.|-+.+.+.++++....
T Consensus 78 dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~---~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~- 153 (366)
T cd03822 78 DVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPRPG---DRALLRLLLRRADAVIVMSSELLRALLLRA- 153 (366)
T ss_pred CEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccchh---hhHHHHHHHhcCCEEEEeeHHHHHHHHhhc-
Confidence 899998733221111 111 12367899999998622221111 111222233458999888755555554310
Q ss_pred HHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHH
Q 044635 278 RMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLK 357 (831)
Q Consensus 278 r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~ 357 (831)
...++.++|+|++...+.... . . ++.....++.+|+++||+.+.||+..+
T Consensus 154 --------------------~~~~~~~i~~~~~~~~~~~~~------~-~---~~~~~~~~~~~i~~~G~~~~~K~~~~l 203 (366)
T cd03822 154 --------------------YPEKIAVIPHGVPDPPAEPPE------S-L---KALGGLDGRPVLLTFGLLRPYKGLELL 203 (366)
T ss_pred --------------------CCCcEEEeCCCCcCcccCCch------h-h---HhhcCCCCCeEEEEEeeccCCCCHHHH
Confidence 024677899999976653210 1 1 122113678899999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcC
Q 044635 358 LLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAE 437 (831)
Q Consensus 358 l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~AD 437 (831)
++|++.+.+++|+++ |+++|... +.....+.+..+++.+. +.. ..|.+..+.++.+++..+|+.||
T Consensus 204 l~a~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~~~~i~~~----~~~--~~v~~~~~~~~~~~~~~~~~~ad 269 (366)
T cd03822 204 LEALPLLVAKHPDVR----LLVAGETH----PDLERYRGEAYALAERL----GLA--DRVIFINRYLPDEELPELFSAAD 269 (366)
T ss_pred HHHHHHHHhhCCCeE----EEEeccCc----cchhhhhhhhHhHHHhc----CCC--CcEEEecCcCCHHHHHHHHhhcC
Confidence 999999998888765 88888422 11111111111222222 111 13555555599999999999999
Q ss_pred EeEECCCcc--CCCC---CCCC-CceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhh
Q 044635 438 CCLVTAVRD--GSEP---SSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYR 508 (831)
Q Consensus 438 v~vvtS~~e--Gma~---~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~ 508 (831)
++++||..| |+.. ++.. +.|+|+|...| .+++ .+|++++|.|++++|++|..+++.+ +++....++.++
T Consensus 270 ~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~~-~~~~~~~~~~~~ 347 (366)
T cd03822 270 VVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLLADP-ELAQALRARARE 347 (366)
T ss_pred EEEecccccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHHcCh-HHHHHHHHHHHH
Confidence 999999999 8721 2222 44777777666 6666 4689999999999999999999854 445555667788
Q ss_pred hhccCCHHHHHHHHHHHH
Q 044635 509 YVSTHDVGYWARSFLQDL 526 (831)
Q Consensus 509 ~v~~~~~~~W~~~~l~~l 526 (831)
++.++++..+++++.+-+
T Consensus 348 ~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 348 YARAMSWERVAERYLRLL 365 (366)
T ss_pred HHhhCCHHHHHHHHHHHh
Confidence 888899999998877643
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.68 E-value=6e-15 Score=162.61 Aligned_cols=273 Identities=18% Similarity=0.189 Sum_probs=173.0
Q ss_pred CCEEEEeCcc-ccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHH------HHHHHhcCCeEeecCHHhHHHHHH
Q 044635 202 DDFVWVHDYH-LMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREE------ILRALLNSDLIGFHTFDYARHFLS 274 (831)
Q Consensus 202 ~d~vwvhDyh-L~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~e------il~~ll~~dligf~t~~~~~~Fl~ 274 (831)
.|+|++|+.. ....+.....+..+.++.+..|-.++...... -+.+.. .-..+-.+|.+.+.+.........
T Consensus 88 ~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~ 166 (375)
T cd03821 88 ADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALPH-KALKKRLAWFLFERRLLQAAAAVHATSEQEAAEIRR 166 (375)
T ss_pred CCEEEEecccchHHHHHHHHHHHhCCCEEEEcccccccccccc-chhhhHHHHHHHHHHHHhcCCEEEECCHHHHHHHHh
Confidence 4899999843 33333332233457889999997665443100 011111 112233466666665433322211
Q ss_pred HHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccccC
Q 044635 275 CCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIFKG 353 (831)
Q Consensus 275 ~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~KG 353 (831)
.+...++.++|+|+|.+.+..... . .. ++.++ ..++++++++||+++.||
T Consensus 167 ---------------------~~~~~~~~vi~~~~~~~~~~~~~~-----~--~~-~~~~~~~~~~~~i~~~G~~~~~K~ 217 (375)
T cd03821 167 ---------------------LGLKAPIAVIPNGVDIPPFAALPS-----R--GR-RRKFPILPDKRIILFLGRLHPKKG 217 (375)
T ss_pred ---------------------hCCcccEEEcCCCcChhccCcchh-----h--hh-hhhccCCCCCcEEEEEeCcchhcC
Confidence 122346788999999987743211 1 11 45554 467889999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHH
Q 044635 354 ISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYY 433 (831)
Q Consensus 354 i~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly 433 (831)
+..+++|+.++.+++|+++ |+++|... . .+ ...+..++.+. +..+.+.+.|.++.+++..+|
T Consensus 218 ~~~li~a~~~l~~~~~~~~----l~i~G~~~---~-~~---~~~~~~~~~~~-------~~~~~v~~~g~~~~~~~~~~~ 279 (375)
T cd03821 218 LDLLIEAFAKLAERFPDWH----LVIAGPDE---G-GY---RAELKQIAAAL-------GLEDRVTFTGMLYGEDKAAAL 279 (375)
T ss_pred HHHHHHHHHHhhhhcCCeE----EEEECCCC---c-ch---HHHHHHHHHhc-------CccceEEEcCCCChHHHHHHH
Confidence 9999999999998888766 88888421 1 12 12222222221 222445567899999999999
Q ss_pred HHcCEeEECCCccCCCC---CCCC-CceEEEecccccccccC-CCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhh
Q 044635 434 VVAECCLVTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSLS-GAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYR 508 (831)
Q Consensus 434 ~~ADv~vvtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l~-~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~ 508 (831)
+.||++++||..||+.. ++.. +.|+|+|...|..+.+. +...+.|.+.++++++|.++++++ +++....++.++
T Consensus 280 ~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~-~~~~~~~~~~~~ 358 (375)
T cd03821 280 ADADLFVLPSHSENFGIVVAEALACGTPVVTTDKVPWQELIEYGCGWVVDDDVDALAAALRRALELP-QRLKAMGENGRA 358 (375)
T ss_pred hhCCEEEeccccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhcCceEEeCCChHHHHHHHHHHHhCH-HHHHHHHHHHHH
Confidence 99999999999999832 2222 45777777777666662 333344556799999999999877 555555666666
Q ss_pred h-hccCCHHHHHHHHH
Q 044635 509 Y-VSTHDVGYWARSFL 523 (831)
Q Consensus 509 ~-v~~~~~~~W~~~~l 523 (831)
+ ...+++..-+++++
T Consensus 359 ~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 359 LVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHHhcCHHHHHHHhh
Confidence 6 56677776666554
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.4e-14 Score=166.38 Aligned_cols=309 Identities=13% Similarity=0.110 Sum_probs=197.7
Q ss_pred hhccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcc-ccchHHHHHhhcCCCeEEE
Q 044635 152 FCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYH-LMVLPTFLRKRFNRVKLGF 230 (831)
Q Consensus 152 f~~~~lWp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyh-L~llp~~lr~~~~~~~i~~ 230 (831)
+-..-.||-||.+. ..-...|-++..+.+ +. |.|||-==- ...+| ++| +...||+|
T Consensus 109 ~~~~~~~~~~t~~~--------~~~~~~~l~~~~~~~---------~~---p~v~vDt~~~~~~~p-l~~--~~~~~v~~ 165 (463)
T PLN02949 109 WIEEETYPRFTMIG--------QSLGSVYLAWEALCK---------FT---PLYFFDTSGYAFTYP-LAR--LFGCKVVC 165 (463)
T ss_pred ccccccCCceehHH--------HHHHHHHHHHHHHHh---------cC---CCEEEeCCCcccHHH-HHH--hcCCcEEE
Confidence 33455678777652 223567777766654 12 348874111 12223 344 34789999
Q ss_pred EEeccCCChHHhhcCCCh-------------------HH----H---H--HHHhcCCeEeecCHHhHHHHHHHHHHHhCC
Q 044635 231 FLHSPFPSSEIYKTLPIR-------------------EE----I---L--RALLNSDLIGFHTFDYARHFLSCCSRMLGL 282 (831)
Q Consensus 231 flH~PfP~~e~f~~lp~r-------------------~e----i---l--~~ll~~dligf~t~~~~~~Fl~~~~r~l~~ 282 (831)
.+|-|--+.+....+-.+ +. + + ..+-.+|.|-..+..-.+++.+. .+
T Consensus 166 yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~~----~~- 240 (463)
T PLN02949 166 YTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEAL----WR- 240 (463)
T ss_pred EEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHHH----cC-
Confidence 999665566444432110 00 0 0 01135687777766555555321 11
Q ss_pred eecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHHH
Q 044635 283 TYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAME 362 (831)
Q Consensus 283 ~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~~ 362 (831)
...++.++++|+|...+... +. +.. .++++++++||+.+.||+..+|+||.
T Consensus 241 ---------------~~~~i~vvyp~vd~~~~~~~---~~---------~~~--~~~~~il~vGR~~~~Kg~~llI~A~~ 291 (463)
T PLN02949 241 ---------------IPERIKRVYPPCDTSGLQAL---PL---------ERS--EDPPYIISVAQFRPEKAHALQLEAFA 291 (463)
T ss_pred ---------------CCCCeEEEcCCCCHHHcccC---Cc---------ccc--CCCCEEEEEEeeeccCCHHHHHHHHH
Confidence 11245678889998766211 10 011 34578999999999999999999999
Q ss_pred HHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEEC
Q 044635 363 QLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVT 442 (831)
Q Consensus 363 ~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvt 442 (831)
+++++.++-.-++.|+++|... .++..++.+++++++++.+ .+..+.|.+.++.+++.++|+.||+++.|
T Consensus 292 ~l~~~~~~~~~~~~LvIvG~~~---~~~~~~~~~eL~~la~~l~-------L~~~V~f~g~v~~~el~~ll~~a~~~v~~ 361 (463)
T PLN02949 292 LALEKLDADVPRPKLQFVGSCR---NKEDEERLQKLKDRAKELG-------LDGDVEFHKNVSYRDLVRLLGGAVAGLHS 361 (463)
T ss_pred HHHHhccccCCCcEEEEEeCCC---CcccHHHHHHHHHHHHHcC-------CCCcEEEeCCCCHHHHHHHHHhCcEEEeC
Confidence 9987543211234599999542 1222334456666665532 22334456789999999999999999999
Q ss_pred CCccCCC---CCCCCCc-eEEEeccccccccc-C------CCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhc
Q 044635 443 AVRDGSE---PSSPKKS-MLVVSEFIGCSPSL-S------GAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVS 511 (831)
Q Consensus 443 S~~eGma---~~~~~~g-~lVlSe~~G~~~~l-~------~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~ 511 (831)
|..|||+ .+++..| |+|++..+|..+++ . +|++++ |++++|++|.++++++++++.+..++.++.+.
T Consensus 362 s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~ 439 (463)
T PLN02949 362 MIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLRMRETERLEIAAAARKRAN 439 (463)
T ss_pred CccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 9999983 2444445 78888877765333 1 367764 89999999999999887777777777888888
Q ss_pred cCCHHHHHHHHHHHHHHH
Q 044635 512 THDVGYWARSFLQDLERT 529 (831)
Q Consensus 512 ~~~~~~W~~~~l~~l~~~ 529 (831)
+++....++++++.+...
T Consensus 440 ~FS~e~~~~~~~~~i~~l 457 (463)
T PLN02949 440 RFSEQRFNEDFKDAIRPI 457 (463)
T ss_pred HcCHHHHHHHHHHHHHHH
Confidence 899988888887777654
|
|
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=6.2e-15 Score=167.95 Aligned_cols=288 Identities=9% Similarity=0.037 Sum_probs=173.5
Q ss_pred HHHcCCCCCEEEEeCccccchHHHHHhhcCCCeE-EEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHH
Q 044635 195 MEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKL-GFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFL 273 (831)
Q Consensus 195 ~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i-~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl 273 (831)
+...+| |+|..|++.-.++..+.... ..+++ ....|. ++...--+.+-.. .+.+..++++.-.+. ++.+..
T Consensus 276 ir~~rp--DIVHt~~~~a~l~g~laA~l-agvpviv~~~h~-~~~~~~~r~~~~e---~~~~~~a~~i~~~sd-~v~~s~ 347 (578)
T PRK15490 276 LCERKL--DYLSVWQDGACLMIALAALI-AGVPRIQLGLRG-LPPVVRKRLFKPE---YEPLYQALAVVPGVD-FMSNNH 347 (578)
T ss_pred HHHcCC--CEEEEcCcccHHHHHHHHHh-cCCCEEEEeecc-cCCcchhhHHHHH---HHHhhhhceeEecch-hhhccH
Confidence 344466 89999999976665555443 34555 344565 3322111111000 112333455433332 333332
Q ss_pred HHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccC
Q 044635 274 SCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKG 353 (831)
Q Consensus 274 ~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KG 353 (831)
...+.+.. .++-...+|.++|+|||...|.+....+ ......++..+ +.+..+|++|+|+.+.||
T Consensus 348 ~v~~~l~~------------~lgip~~KI~VIyNGVD~~rf~p~~~~~--~~~r~~~~~~l-~~~~~vIg~VgRl~~~Kg 412 (578)
T PRK15490 348 CVTRHYAD------------WLKLEAKHFQVVYNGVLPPSTEPSSEVP--HKIWQQFTQKT-QDADTTIGGVFRFVGDKN 412 (578)
T ss_pred HHHHHHHH------------HhCCCHHHEEEEeCCcchhhcCccchhh--HHHHHHhhhcc-CCCCcEEEEEEEEehhcC
Confidence 21121100 0111344788999999998876432111 01112222223 245678999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHH
Q 044635 354 ISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYY 433 (831)
Q Consensus 354 i~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly 433 (831)
...+|+|+.++++++|+++ |+++| +|+.. +++++++.+.+ +.+-+.|.|. .+++..+|
T Consensus 413 ~~~LI~A~a~llk~~pdir----LvIVG-----dG~~~----eeLk~la~elg-------L~d~V~FlG~--~~Dv~~~L 470 (578)
T PRK15490 413 PFAWIDFAARYLQHHPATR----FVLVG-----DGDLR----AEAQKRAEQLG-------ILERILFVGA--SRDVGYWL 470 (578)
T ss_pred HHHHHHHHHHHHhHCCCeE----EEEEe-----CchhH----HHHHHHHHHcC-------CCCcEEECCC--hhhHHHHH
Confidence 9999999999999999866 88888 34433 34444444432 2233344555 56899999
Q ss_pred HHcCEeEECCCccCCC---CCCCC-CceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCH--HHHHHHHH
Q 044635 434 VVAECCLVTAVRDGSE---PSSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMAD--QEKQLRHE 504 (831)
Q Consensus 434 ~~ADv~vvtS~~eGma---~~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~--~er~~r~~ 504 (831)
+.||+||+||.+|||. .+++. +.|+|+|...|+.+.+ .+|++|+|.|++++++++..+..+.. .++....+
T Consensus 471 aaADVfVlPS~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA~aL~~ll~~~~~mg~ 550 (578)
T PRK15490 471 QKMNVFILFSRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYAEKLVNLWRSRTGICQ 550 (578)
T ss_pred HhCCEEEEcccccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999982 12222 4578888887777766 46899999999999998854433222 22223335
Q ss_pred HHhhhh-ccCCHHHHHHHHHHHHH
Q 044635 505 KHYRYV-STHDVGYWARSFLQDLE 527 (831)
Q Consensus 505 ~~~~~v-~~~~~~~W~~~~l~~l~ 527 (831)
+.++++ .++++...++.+++-+.
T Consensus 551 ~ARe~V~e~FS~e~Mv~~y~ki~~ 574 (578)
T PRK15490 551 QTQSFLQERFTVEHMVGTFVKTIA 574 (578)
T ss_pred HHHHHHHhhCCHHHHHHHHHHHHH
Confidence 567766 45888888777766554
|
|
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.67 E-value=8e-15 Score=160.98 Aligned_cols=274 Identities=19% Similarity=0.191 Sum_probs=183.7
Q ss_pred CCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhC
Q 044635 202 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLG 281 (831)
Q Consensus 202 ~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~ 281 (831)
-|+|++|......+......+..+.++.+..|.+++....... ..+......+-.+|.+.+.+....+.|....
T Consensus 94 ~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~----- 167 (377)
T cd03798 94 PDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-LLRALLRRALRRADAVIAVSEALADELKALG----- 167 (377)
T ss_pred CCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc-----
Confidence 3899999555444444444444557899999977764432221 1233344455678999998887776665311
Q ss_pred CeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccccCHHHHHHH
Q 044635 282 LTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIFKGISLKLLA 360 (831)
Q Consensus 282 ~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~KGi~~~l~A 360 (831)
....++.++|+|+|...+..... ... +++. ..++..++++||+.+.||+..+++|
T Consensus 168 ---------------~~~~~~~~i~~~~~~~~~~~~~~-----~~~----~~~~~~~~~~~i~~~g~~~~~k~~~~li~~ 223 (377)
T cd03798 168 ---------------IDPEKVTVIPNGVDTERFSPADR-----AEA----RKLGLPEDKKVILFVGRLVPRKGIDYLIEA 223 (377)
T ss_pred ---------------CCCCceEEcCCCcCcccCCCcch-----HHH----HhccCCCCceEEEEeccCccccCHHHHHHH
Confidence 11236778999999877643211 111 2222 3578899999999999999999999
Q ss_pred HHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeE
Q 044635 361 MEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCL 440 (831)
Q Consensus 361 ~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v 440 (831)
++.+.+++|+++ |+++|. ++....+++.+ +.. +..+.+.+.+.++.+++..+|+.||+++
T Consensus 224 ~~~~~~~~~~~~----l~i~g~-----~~~~~~~~~~~----~~~-------~~~~~v~~~g~~~~~~~~~~~~~ad~~i 283 (377)
T cd03798 224 LARLLKKRPDVH----LVIVGD-----GPLREALEALA----AEL-------GLEDRVTFLGAVPHEEVPAYYAAADVFV 283 (377)
T ss_pred HHHHHhcCCCeE----EEEEcC-----CcchHHHHHHH----Hhc-------CCcceEEEeCCCCHHHHHHHHHhcCeee
Confidence 999988777654 887773 23333333332 221 2334556678899999999999999999
Q ss_pred ECCCccCCCC---CC-CCCceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccC
Q 044635 441 VTAVRDGSEP---SS-PKKSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTH 513 (831)
Q Consensus 441 vtS~~eGma~---~~-~~~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~ 513 (831)
+||..||+.. ++ ..+.|+|+|...|..+.+ .+|++++|.|+++++++|.++++++.. ....+........+
T Consensus 284 ~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~--~~~~~~~~~~~~~~ 361 (377)
T cd03798 284 LPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLADPWL--RLGRAARRRVAERF 361 (377)
T ss_pred cchhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCcHH--HHhHHHHHHHHHHh
Confidence 9999998821 22 225577888777766665 245899999999999999999987754 22223334445667
Q ss_pred CHHHHHHHHHHHHH
Q 044635 514 DVGYWARSFLQDLE 527 (831)
Q Consensus 514 ~~~~W~~~~l~~l~ 527 (831)
++..+++++.+-+.
T Consensus 362 s~~~~~~~~~~~~~ 375 (377)
T cd03798 362 SWENVAERLLELYR 375 (377)
T ss_pred hHHHHHHHHHHHHh
Confidence 77777777766554
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.1e-14 Score=159.80 Aligned_cols=278 Identities=14% Similarity=0.131 Sum_probs=181.0
Q ss_pred HcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHH-hcCCeEeecCHHhHHHHHHH
Q 044635 197 VINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRAL-LNSDLIGFHTFDYARHFLSC 275 (831)
Q Consensus 197 ~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~l-l~~dligf~t~~~~~~Fl~~ 275 (831)
..++ |+|.+|+++.......+.......++.+..|.-++... -...+....+.+-+ -.+|.+...+......+...
T Consensus 78 ~~~~--div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~ 154 (365)
T cd03807 78 RLRP--DVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLG-KKSTRLVARLRRLLSSFIPLIVANSAAAAEYHQAI 154 (365)
T ss_pred hhCC--CEEEeccccccHHHHHHHHhcCCCcEEEEecCCccccc-chhHhHHHHHHHHhccccCeEEeccHHHHHHHHHc
Confidence 3455 89999999987777766665467889998887665432 00001111122111 13566655554433333220
Q ss_pred HHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccccCH
Q 044635 276 CSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIFKGI 354 (831)
Q Consensus 276 ~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~KGi 354 (831)
+ ....++.++|+|+|...+..... .....+++++ +.++.+++++||+.+.||+
T Consensus 155 -----~---------------~~~~~~~vi~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~ 208 (365)
T cd03807 155 -----G---------------YPPKKIVVIPNGVDTERFSPDLD------ARARLREELGLPEDTFLIGIVARLHPQKDH 208 (365)
T ss_pred -----C---------------CChhheeEeCCCcCHHhcCCccc------chHHHHHhcCCCCCCeEEEEecccchhcCH
Confidence 1 11235677899999887643211 1234456666 5678899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHH
Q 044635 355 SLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYV 434 (831)
Q Consensus 355 ~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~ 434 (831)
..+++|+..+.+++|+++ |+++|... ....++.... .. .+ ..+.+.+.+. .+++..+|+
T Consensus 209 ~~li~a~~~l~~~~~~~~----l~i~G~~~-----~~~~~~~~~~---~~----~~---~~~~v~~~g~--~~~~~~~~~ 267 (365)
T cd03807 209 ATLLRAAALLLKKFPNAR----LLLVGDGP-----DRANLELLAL---KE----LG---LEDKVILLGE--RSDVPALLN 267 (365)
T ss_pred HHHHHHHHHHHHhCCCeE----EEEecCCc-----chhHHHHHHH---Hh----cC---CCceEEEccc--cccHHHHHH
Confidence 999999999988888765 88888432 2222222221 11 11 2233444443 568999999
Q ss_pred HcCEeEECCCccCCCC---CCCC-CceEEEecccccccccC-CCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhh
Q 044635 435 VAECCLVTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSLS-GAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRY 509 (831)
Q Consensus 435 ~ADv~vvtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l~-~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~ 509 (831)
.||++++||..||+.. ++.. +.|+|+|...|..+.+. +|+++++.|+++++++|.++++.+ +++....+..+++
T Consensus 268 ~adi~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~~ 346 (365)
T cd03807 268 ALDVFVLSSLSEGFPNVLLEAMACGLPVVATDVGDNAELVGDTGFLVPPGDPEALAEAIEALLADP-ALRQALGEAARER 346 (365)
T ss_pred hCCEEEeCCccccCCcHHHHHHhcCCCEEEcCCCChHHHhhcCCEEeCCCCHHHHHHHHHHHHhCh-HHHHHHHHHHHHH
Confidence 9999999999998821 2222 45778888777766664 589999999999999999999876 4555555666666
Q ss_pred hc-cCCHHHHHHHHHHH
Q 044635 510 VS-THDVGYWARSFLQD 525 (831)
Q Consensus 510 v~-~~~~~~W~~~~l~~ 525 (831)
+. .+++...++++.+-
T Consensus 347 ~~~~~s~~~~~~~~~~~ 363 (365)
T cd03807 347 IEENFSIEAMVEAYEEL 363 (365)
T ss_pred HHHhCCHHHHHHHHHHH
Confidence 64 47877777776653
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.7e-15 Score=169.80 Aligned_cols=357 Identities=15% Similarity=0.162 Sum_probs=194.5
Q ss_pred ccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHHH-cCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEE
Q 044635 154 KQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEV-INPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFL 232 (831)
Q Consensus 154 ~~~lWp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~-~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~fl 232 (831)
+.-||-.|+--. |.....+++..-=.|.. ..|-+...+. .....|++..||++-......||++.++++..|+.
T Consensus 105 ~~~lW~~~~i~s---~~~~~d~nea~~fgy~~--~~~i~~~~~~~~~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTt 179 (590)
T cd03793 105 KGELWELCGIGS---PEGDRETNDAIIFGFLV--AWFLGEFAEQFDDEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTT 179 (590)
T ss_pred HHHHHHHcCCCC---CCCCCcchHHHHHHHHH--HHHHHHHHhhccCCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEe
Confidence 345899988643 32223344332223311 1222222222 11235899999999999999999999999999999
Q ss_pred eccCCChHHhhcCCCh-HHHHHHHhcCCeEeecC-------HHhHHHHHH-----HHHHHhCCeecccCceeeEEEcCEE
Q 044635 233 HSPFPSSEIYKTLPIR-EEILRALLNSDLIGFHT-------FDYARHFLS-----CCSRMLGLTYESKRGYIGLEYYGRT 299 (831)
Q Consensus 233 H~PfP~~e~f~~lp~r-~eil~~ll~~dligf~t-------~~~~~~Fl~-----~~~r~l~~~~~~~~~~~~~~~~gr~ 299 (831)
| +.++-|.|-.. ..+-. ++-.|.- .-+.++.++ .|+++..++..+.+. ..+.+++.
T Consensus 180 H----AT~~GR~l~~g~~~~y~-----~l~~~~~d~eA~~~~I~~r~~iE~~aa~~Ad~fttVS~it~~E--~~~Ll~~~ 248 (590)
T cd03793 180 H----ATLLGRYLCAGNVDFYN-----NLDYFDVDKEAGKRGIYHRYCIERAAAHCAHVFTTVSEITAYE--AEHLLKRK 248 (590)
T ss_pred c----ccccccccccCCcccch-----hhhhcchhhhhhcccchHHHHHHHHHHhhCCEEEECChHHHHH--HHHHhCCC
Confidence 9 44455531110 00000 0000100 001222222 112221111111000 01223343
Q ss_pred EEEEEeecccChHHHHHhhCCc----chHHH-----HHHHHHHhc-cCCcEEEEe-ccCccc-ccCHHHHHHHHHHHHHh
Q 044635 300 VSIKILPVGIHMGQLQSVLSLP----GTEAK-----VSELIKQFH-DQGKVMLLG-VDDMDI-FKGISLKLLAMEQLLIQ 367 (831)
Q Consensus 300 ~~i~v~P~GId~~~~~~~~~~~----~~~~~-----~~~lr~~~~-~~~~~iil~-VdRld~-~KGi~~~l~A~~~lL~~ 367 (831)
..+ |+|+|||++.|....... ...++ ...++.+|+ ..+++++++ +||+++ .||++.+|+|+.++-..
T Consensus 249 pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~ 327 (590)
T cd03793 249 PDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYL 327 (590)
T ss_pred CCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHH
Confidence 333 899999999986432110 01111 223456665 457888888 899999 99999999999998542
Q ss_pred CCC-CCCcEEEEEEecCCCCCc---------hhHHHHHHHHHHHHHHHhcc---------C-------------------
Q 044635 368 HPE-WQGKVVLVQIANPARGRG---------KDVKEVQAETYSTVERINQT---------F------------------- 409 (831)
Q Consensus 368 ~P~-~~~~vvLvqig~p~r~~~---------~~~~~l~~~i~~lv~~IN~~---------~------------------- 409 (831)
-.. -.++.|+..+..|+...+ .-..++++.+.++..+|..+ .
T Consensus 328 l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~ 407 (590)
T cd03793 328 LKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRI 407 (590)
T ss_pred HHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHH
Confidence 111 112233333444554331 22345666666666666555 1
Q ss_pred ----------------------------------C-CCCCccEEEecCCCC------HHHHHHHHHHcCEeEECCCccCC
Q 044635 410 ----------------------------------G-KPGYDPVVLIDEPLK------FYERIAYYVVAECCLVTAVRDGS 448 (831)
Q Consensus 410 ----------------------------------g-~~~~~pv~~~~~~v~------~~el~aly~~ADv~vvtS~~eGm 448 (831)
. ..+-..|+|....++ ..+...+|+.||++|+||.+|||
T Consensus 408 ~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~f 487 (590)
T cd03793 408 FALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPW 487 (590)
T ss_pred HhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCC
Confidence 0 012223555443332 33588899999999999999998
Q ss_pred CC---CCCC-CceEEEecccccc----cccC----CCceeC-------CCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhh
Q 044635 449 EP---SSPK-KSMLVVSEFIGCS----PSLS----GAIRVN-------PWNIDAVSDAMDSALEMADQEKQLRHEKHYRY 509 (831)
Q Consensus 449 a~---~~~~-~g~lVlSe~~G~~----~~l~----~allVn-------P~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~ 509 (831)
+. ++.. +.|+|.|..+|.. +.+. .|+.|. |.+++++|++|.+.++++..++........+.
T Consensus 488 G~~~lEAma~G~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~~~r~~~~~r~~~~r~ 567 (590)
T cd03793 488 GYTPAECTVMGIPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQLSRRQRIIQRNRTERL 567 (590)
T ss_pred CcHHHHHHHcCCCEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHH
Confidence 21 2222 4588888887773 3332 478887 56678999999998876544333322233355
Q ss_pred hccCCHHHHHHHHHHHHH
Q 044635 510 VSTHDVGYWARSFLQDLE 527 (831)
Q Consensus 510 v~~~~~~~W~~~~l~~l~ 527 (831)
....++.+-+..+++.-.
T Consensus 568 s~~f~W~~~~~~Y~~A~~ 585 (590)
T cd03793 568 SDLLDWRNLGRYYRKARQ 585 (590)
T ss_pred HHhCCHHHHHHHHHHHHH
Confidence 556666666665555433
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.5e-14 Score=167.76 Aligned_cols=266 Identities=13% Similarity=0.088 Sum_probs=167.1
Q ss_pred CCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChH-Hhhc-C---CChHHHHHHHhcCCeEeecCHHhHHHHHHH
Q 044635 201 EDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE-IYKT-L---PIREEILRALLNSDLIGFHTFDYARHFLSC 275 (831)
Q Consensus 201 ~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e-~f~~-l---p~r~eil~~ll~~dligf~t~~~~~~Fl~~ 275 (831)
+.|++.++--. ...+.++ +..+.+|+..++|.-.=+.. .-.. . +.-+..++.+-.+|.|...|....+.....
T Consensus 211 ~~di~i~dr~~-~~~~~~~-~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~~l~~~ 288 (500)
T TIGR02918 211 KKDIIILDRST-GIGQAVL-ENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQILKNQ 288 (500)
T ss_pred CCCEEEEcCCc-ccchHHH-hcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHHHHHHH
Confidence 45887775434 3444444 56678999999995331110 0000 0 111222344445688777776544433321
Q ss_pred HHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHH
Q 044635 276 CSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGIS 355 (831)
Q Consensus 276 ~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~ 355 (831)
.. .+.+...+|.++|+|++...+. +. .. ..+..|++|||+.+.||+.
T Consensus 289 ~~----------------~~~~~~~ki~viP~g~~~~~~~-----~~----------~~--r~~~~il~vGrl~~~Kg~~ 335 (500)
T TIGR02918 289 FK----------------KYYNIEPRIYTIPVGSLDELQY-----PE----------QE--RKPFSIITASRLAKEKHID 335 (500)
T ss_pred hh----------------hhcCCCCcEEEEcCCCcccccC-----cc----------cc--cCCeEEEEEeccccccCHH
Confidence 11 1122234677899998654321 10 01 3456899999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHH
Q 044635 356 LKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVV 435 (831)
Q Consensus 356 ~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ 435 (831)
.+|+|+.++.+++|+++ |+++| +|+.. +++++++.+.+ ....+.+.|+. ++..+|+.
T Consensus 336 ~li~A~~~l~~~~p~~~----l~i~G-----~G~~~----~~l~~~i~~~~-------l~~~V~f~G~~---~~~~~~~~ 392 (500)
T TIGR02918 336 WLVKAVVKAKKSVPELT----FDIYG-----EGGEK----QKLQKIINENQ-------AQDYIHLKGHR---NLSEVYKD 392 (500)
T ss_pred HHHHHHHHHHhhCCCeE----EEEEE-----CchhH----HHHHHHHHHcC-------CCCeEEEcCCC---CHHHHHHh
Confidence 99999999999999876 88888 34443 34555554432 12334455654 57889999
Q ss_pred cCEeEECCCccCCCC---CCCCCc-eEEEeccc-cccccc---CCCceeCC----CC----HHHHHHHHHHHhcCCHHHH
Q 044635 436 AECCLVTAVRDGSEP---SSPKKS-MLVVSEFI-GCSPSL---SGAIRVNP----WN----IDAVSDAMDSALEMADQEK 499 (831)
Q Consensus 436 ADv~vvtS~~eGma~---~~~~~g-~lVlSe~~-G~~~~l---~~allVnP----~d----~~~~A~ai~~aL~m~~~er 499 (831)
||++|+||.+|||+. +++.+| |+|+|... |..+.+ .+|++|+| .| ++++|++|.++|+ ++++
T Consensus 393 adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~--~~~~ 470 (500)
T TIGR02918 393 YELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFN--SNDI 470 (500)
T ss_pred CCEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhC--hHHH
Confidence 999999999999832 333445 66666665 555555 36899973 34 8899999999994 3455
Q ss_pred HHHHHHHhhhhccCCHHHHHHHHHHHH
Q 044635 500 QLRHEKHYRYVSTHDVGYWARSFLQDL 526 (831)
Q Consensus 500 ~~r~~~~~~~v~~~~~~~W~~~~l~~l 526 (831)
....+..++...+++...-++++.+-+
T Consensus 471 ~~~~~~a~~~a~~fs~~~v~~~w~~ll 497 (500)
T TIGR02918 471 DAFHEYSYQIAEGFLTANIIEKWKKLV 497 (500)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 555667777788888776666655443
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.5e-14 Score=159.60 Aligned_cols=272 Identities=15% Similarity=0.108 Sum_probs=179.8
Q ss_pred HHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCCh----HHHH-HHHhcCCeEeecCHHhHH
Q 044635 196 EVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIR----EEIL-RALLNSDLIGFHTFDYAR 270 (831)
Q Consensus 196 ~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r----~eil-~~ll~~dligf~t~~~~~ 270 (831)
+..+| |+|++|...........-.+..++++.+++|..||..-........ ..+. ...-.+|.+-+.+.....
T Consensus 80 ~~~~p--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~ 157 (364)
T cd03814 80 DAFAP--DVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLAD 157 (364)
T ss_pred HhcCC--CEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHH
Confidence 44565 8999996544333333333345788999999888733221111111 1122 223357888887776655
Q ss_pred HHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCccc
Q 044635 271 HFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDI 350 (831)
Q Consensus 271 ~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~ 350 (831)
.+.. .+ ..++.++|+|+|...|.+.... ...+++++..++++++++||+.+
T Consensus 158 ~~~~--------------------~~--~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~~G~~~~ 208 (364)
T cd03814 158 ELRA--------------------RG--FRRVRLWPRGVDTELFHPRRRD-------EALRARLGPPDRPVLLYVGRLAP 208 (364)
T ss_pred HHhc--------------------cC--CCceeecCCCccccccCccccc-------HHHHHHhCCCCCeEEEEEecccc
Confidence 2221 00 1246788999998877532111 12233333356789999999999
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHH
Q 044635 351 FKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERI 430 (831)
Q Consensus 351 ~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~ 430 (831)
.||+..+++|+.++.++ |+++ |+++|. +++...++ . ....|. +.+.++.+++.
T Consensus 209 ~k~~~~~i~~~~~l~~~-~~~~----l~i~G~-----~~~~~~~~--------~--------~~~~v~-~~g~~~~~~~~ 261 (364)
T cd03814 209 EKNLEALLDADLPLRRR-PPVR----LVIVGD-----GPARARLE--------A--------RYPNVH-FLGFLDGEELA 261 (364)
T ss_pred ccCHHHHHHHHHHhhhc-CCce----EEEEeC-----CchHHHHh--------c--------cCCcEE-EEeccCHHHHH
Confidence 99999999999999877 7665 888883 23222222 0 011344 45678999999
Q ss_pred HHHHHcCEeEECCCccCCCC---CCCC-CceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHH
Q 044635 431 AYYVVAECCLVTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRH 503 (831)
Q Consensus 431 aly~~ADv~vvtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~ 503 (831)
.+|+.||++++||..||++. ++.. +.|+|++...|..+.+ ..|++++|.|.++++++|.++++.+ +++....
T Consensus 262 ~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~ 340 (364)
T cd03814 262 AAYASADVFVFPSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLADP-ELRRRMA 340 (364)
T ss_pred HHHHhCCEEEECcccccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCH-HHHHHHH
Confidence 99999999999999998721 2222 4577777777777666 3689999999999999999999754 4555556
Q ss_pred HHHhhhhccCCHHHHHHHHHHHH
Q 044635 504 EKHYRYVSTHDVGYWARSFLQDL 526 (831)
Q Consensus 504 ~~~~~~v~~~~~~~W~~~~l~~l 526 (831)
+..++.+.++++..+++++++-+
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 341 ARARAEAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHHHHHHhhcCHHHHHHHHHHhh
Confidence 66777778889888888777543
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.4e-14 Score=162.98 Aligned_cols=268 Identities=12% Similarity=0.099 Sum_probs=177.2
Q ss_pred CCCCCEEEEeCccccchH-HHHHhhcCCCeEEEEEecc--CCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHH
Q 044635 199 NPEDDFVWVHDYHLMVLP-TFLRKRFNRVKLGFFLHSP--FPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSC 275 (831)
Q Consensus 199 ~~~~d~vwvhDyhL~llp-~~lr~~~~~~~i~~flH~P--fP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~ 275 (831)
+++.|+++.|-++..... .+++++....++....|-. ++.......++.++.+ +-.+|.|.+.+....+.+...
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~~~~~~~~~~~~~~~---~~~~d~ii~~S~~~~~~l~~~ 201 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYEDRYPSGYIPLRRYL---LSSLDAVFPCSEQGRNYLQKR 201 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhhhhccccchHHHHHH---HhcCCEEEECCHHHHHHHHHH
Confidence 344577777655544433 3566666656688888832 1111111112222222 346899998887666544321
Q ss_pred HHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHH
Q 044635 276 CSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGIS 355 (831)
Q Consensus 276 ~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~ 355 (831)
++ ....++.++|+|++...+... .. ..++..|+++||+.+.||++
T Consensus 202 ----~~---------------~~~~ki~vi~~gv~~~~~~~~--------------~~--~~~~~~il~~Grl~~~Kg~~ 246 (407)
T cd04946 202 ----YP---------------AYKEKIKVSYLGVSDPGIISK--------------PS--KDDTLRIVSCSYLVPVKRVD 246 (407)
T ss_pred ----CC---------------CccccEEEEECCcccccccCC--------------CC--CCCCEEEEEeeccccccCHH
Confidence 11 123466788999997655311 01 15678899999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHH
Q 044635 356 LKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVV 435 (831)
Q Consensus 356 ~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ 435 (831)
.+++|+.++.+++|+.. +.++.+| +|+..+++ ++++.+. + ..+.+.+.|.++.+|+.++|+.
T Consensus 247 ~li~a~~~l~~~~p~~~--l~~~iiG-----~g~~~~~l----~~~~~~~----~---~~~~V~f~G~v~~~e~~~~~~~ 308 (407)
T cd04946 247 LIIKALAALAKARPSIK--IKWTHIG-----GGPLEDTL----KELAESK----P---ENISVNFTGELSNSEVYKLYKE 308 (407)
T ss_pred HHHHHHHHHHHhCCCce--EEEEEEe-----CchHHHHH----HHHHHhc----C---CCceEEEecCCChHHHHHHHhh
Confidence 99999999999988764 6677777 34443333 3443321 1 1134556789999999999986
Q ss_pred --cCEeEECCCccCCCC---CCCC-CceEEEecccccccccC---CCceeCC-CCHHHHHHHHHHHhcCCHHHHHHHHHH
Q 044635 436 --AECCLVTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSLS---GAIRVNP-WNIDAVSDAMDSALEMADQEKQLRHEK 505 (831)
Q Consensus 436 --ADv~vvtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l~---~allVnP-~d~~~~A~ai~~aL~m~~~er~~r~~~ 505 (831)
||+++.||..||+.. +++. +.|+|+|..+|..+.+. +|++++| .|++++|++|.++++ +++++....++
T Consensus 309 ~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I~~ll~-~~~~~~~m~~~ 387 (407)
T cd04946 309 NPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSLSKFID-NEEEYQTMREK 387 (407)
T ss_pred cCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHHHHHHh-CHHHHHHHHHH
Confidence 788999999999921 2222 45777888777777663 4688876 489999999999998 44556555666
Q ss_pred Hhhhh-ccCCHHHHHHHHH
Q 044635 506 HYRYV-STHDVGYWARSFL 523 (831)
Q Consensus 506 ~~~~v-~~~~~~~W~~~~l 523 (831)
.++++ .++++..+.++|+
T Consensus 388 ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 388 AREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHcCHHHhHHHhc
Confidence 77776 5678887777764
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.65 E-value=7.5e-14 Score=153.51 Aligned_cols=257 Identities=16% Similarity=0.166 Sum_probs=165.6
Q ss_pred HHHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHH
Q 044635 193 RIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHF 272 (831)
Q Consensus 193 ~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~F 272 (831)
++++..++ |+|++|.+..+.++.....+...+|+.+.+|-.++.. |....+.. ..|.+-..+....+.|
T Consensus 90 ~~~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~------~~~~~~~~---~~d~ii~~s~~~~~~~ 158 (359)
T cd03823 90 RLLEDFRP--DVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLIC------PRQGLFKK---GGDAVIAPSRFLLDRY 158 (359)
T ss_pred HHHHHcCC--CEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeec------chhhhhcc---CCCEEEEeCHHHHHHH
Confidence 33444455 8999998755544443333344689999999655322 21111111 1288877776555555
Q ss_pred HHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCccccc
Q 044635 273 LSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFK 352 (831)
Q Consensus 273 l~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~K 352 (831)
... + ....++.++|+|+|...+..... .. ..++.+++++||+.+.|
T Consensus 159 ~~~-----~---------------~~~~~~~vi~n~~~~~~~~~~~~-------------~~-~~~~~~i~~~G~~~~~k 204 (359)
T cd03823 159 VAN-----G---------------LFAEKISVIRNGIDLDRAKRPRR-------------AP-PGGRLRFGFIGQLTPHK 204 (359)
T ss_pred HHc-----C---------------CCccceEEecCCcChhhcccccc-------------CC-CCCceEEEEEecCcccc
Confidence 420 0 11347788999999987642110 11 25678899999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHH
Q 044635 353 GISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAY 432 (831)
Q Consensus 353 Gi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~al 432 (831)
|+..+++|+..+.+ ++++ |+++|... .....+... + ..+.+.+.+.++.+++..+
T Consensus 205 ~~~~li~~~~~l~~--~~~~----l~i~G~~~-----~~~~~~~~~-----------~---~~~~v~~~g~~~~~~~~~~ 259 (359)
T cd03823 205 GVDLLLEAFKRLPR--GDIE----LVIVGNGL-----ELEEESYEL-----------E---GDPRVEFLGAYPQEEIDDF 259 (359)
T ss_pred CHHHHHHHHHHHHh--cCcE----EEEEcCch-----hhhHHHHhh-----------c---CCCeEEEeCCCCHHHHHHH
Confidence 99999999998866 5544 88888432 211111111 1 1134456778999999999
Q ss_pred HHHcCEeEECCC-ccCCCC---CCCC-CceEEEecccccccccC---CCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHH
Q 044635 433 YVVAECCLVTAV-RDGSEP---SSPK-KSMLVVSEFIGCSPSLS---GAIRVNPWNIDAVSDAMDSALEMADQEKQLRHE 504 (831)
Q Consensus 433 y~~ADv~vvtS~-~eGma~---~~~~-~g~lVlSe~~G~~~~l~---~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~ 504 (831)
|+.||++++||. .||+.. ++.. +.|+|+|...|..+.+. +|++++|.|+++++++|.++++.+ +.++...+
T Consensus 260 ~~~ad~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~-~~~~~~~~ 338 (359)
T cd03823 260 YAEIDVLVVPSIWPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDDP-DLLERLRA 338 (359)
T ss_pred HHhCCEEEEcCcccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhCh-HHHHHHHH
Confidence 999999999997 688821 2222 45788888777776663 589999999999999999999844 44444444
Q ss_pred HHhhhhccCCHHHHHHHHH
Q 044635 505 KHYRYVSTHDVGYWARSFL 523 (831)
Q Consensus 505 ~~~~~v~~~~~~~W~~~~l 523 (831)
..++.+.. ..++++++
T Consensus 339 ~~~~~~~~---~~~~~~~~ 354 (359)
T cd03823 339 GIEPPRSI---EDQAEEYL 354 (359)
T ss_pred hHHHhhhH---HHHHHHHH
Confidence 45554433 44444443
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.65 E-value=8e-15 Score=164.32 Aligned_cols=277 Identities=16% Similarity=0.081 Sum_probs=177.6
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCCh-HHhhcCCC---hHHHHHHHhc
Q 044635 182 AYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSS-EIYKTLPI---REEILRALLN 257 (831)
Q Consensus 182 ~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~-e~f~~lp~---r~eil~~ll~ 257 (831)
...+.-+.|-+++.. .. ..|+|.+|-.+.... .+.......+...++|...-.. ..-...++ .+.++..+-.
T Consensus 82 ~~~~l~~~~l~~l~~-~~-~~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (372)
T cd04949 82 NEEELFAFFLDELNK-DT-KPDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDK 157 (372)
T ss_pred CHHHHHHHHHHHHhc-CC-CCCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhh
Confidence 344444455555543 22 348888887776654 2333444566778888532111 00001122 2455555667
Q ss_pred CCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccC
Q 044635 258 SDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQ 337 (831)
Q Consensus 258 ~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~ 337 (831)
+|.|.+.|..-.+.+.... + ...++.++|+|++...+.... ... .
T Consensus 158 ~d~ii~~s~~~~~~l~~~~----~----------------~~~~v~~ip~g~~~~~~~~~~-------------~~~--~ 202 (372)
T cd04949 158 VDGVIVATEQQKQDLQKQF----G----------------NYNPIYTIPVGSIDPLKLPAQ-------------FKQ--R 202 (372)
T ss_pred CCEEEEccHHHHHHHHHHh----C----------------CCCceEEEcccccChhhcccc-------------hhh--c
Confidence 8999988876666664321 1 111267899999987664210 011 4
Q ss_pred CcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccE
Q 044635 338 GKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPV 417 (831)
Q Consensus 338 ~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv 417 (831)
.+..++++||+.+.||+..+|+|+.++.+++|+++ |+++|.. +....++..+ .+. +....
T Consensus 203 ~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~----l~i~G~g-----~~~~~~~~~~----~~~-------~~~~~ 262 (372)
T cd04949 203 KPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDAT----LDIYGYG-----DEEEKLKELI----EEL-------GLEDY 262 (372)
T ss_pred CCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcE----EEEEEeC-----chHHHHHHHH----HHc-------CCcce
Confidence 56789999999999999999999999999999876 8888843 3323333332 222 22234
Q ss_pred EEecCCCCHHHHHHHHHHcCEeEECCCccCCCC---CCCCCc-eEEEeccc-cccccc---CCCceeCCCCHHHHHHHHH
Q 044635 418 VLIDEPLKFYERIAYYVVAECCLVTAVRDGSEP---SSPKKS-MLVVSEFI-GCSPSL---SGAIRVNPWNIDAVSDAMD 489 (831)
Q Consensus 418 ~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~---~~~~~g-~lVlSe~~-G~~~~l---~~allVnP~d~~~~A~ai~ 489 (831)
+.+.|. .+++.++|+.||++|+||..||+.. ++...| |+|++... |..+.+ .+|++++|.|++++|++|.
T Consensus 263 v~~~g~--~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~~i~ 340 (372)
T cd04949 263 VFLKGY--TRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAEAII 340 (372)
T ss_pred EEEcCC--CCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHHHHH
Confidence 455553 5689999999999999999998831 333344 66777665 555555 4689999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHhhhhccCCHHHHHH
Q 044635 490 SALEMADQEKQLRHEKHYRYVSTHDVGYWAR 520 (831)
Q Consensus 490 ~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 520 (831)
.+|+.+ +.+....+..++...++++..+++
T Consensus 341 ~ll~~~-~~~~~~~~~a~~~~~~~s~~~~~~ 370 (372)
T cd04949 341 ELLNDP-KLLQKFSEAAYENAERYSEENVWE 370 (372)
T ss_pred HHHcCH-HHHHHHHHHHHHHHHHhhHHHHHh
Confidence 999865 444455555666666666655544
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.62 E-value=3e-14 Score=155.11 Aligned_cols=255 Identities=13% Similarity=0.126 Sum_probs=167.3
Q ss_pred CEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCC
Q 044635 203 DFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGL 282 (831)
Q Consensus 203 d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~ 282 (831)
|+|++|+.+...+...+.... .++.+..|..++....... +.......+-.+|.+-+.+......+.
T Consensus 85 d~i~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~ii~~s~~~~~~~~--------- 151 (348)
T cd03820 85 DVVISFLTSLLTFLASLGLKI--VKLIVSEHNSPDAYKKRLR--RLLLRRLLYRRADAVVVLTEEDRALYY--------- 151 (348)
T ss_pred CEEEEcCchHHHHHHHHhhcc--ccEEEecCCCccchhhhhH--HHHHHHHHHhcCCEEEEeCHHHHHHhh---------
Confidence 899999888222222222211 4888888977654332211 111123344567888777765441110
Q ss_pred eecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHHH
Q 044635 283 TYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAME 362 (831)
Q Consensus 283 ~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~~ 362 (831)
.....++.++|+|++...+... . ..+++.++++||+.+.||++.+++|+.
T Consensus 152 -------------~~~~~~~~vi~~~~~~~~~~~~---------------~--~~~~~~i~~~g~~~~~K~~~~l~~~~~ 201 (348)
T cd03820 152 -------------KKFNKNVVVIPNPLPFPPEEPS---------------S--DLKSKRILAVGRLVPQKGFDLLIEAWA 201 (348)
T ss_pred -------------ccCCCCeEEecCCcChhhcccc---------------C--CCCCcEEEEEEeeccccCHHHHHHHHH
Confidence 1122367789999998765311 1 156789999999999999999999999
Q ss_pred HHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEEC
Q 044635 363 QLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVT 442 (831)
Q Consensus 363 ~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvt 442 (831)
++.+.+|+++ |+++|. ++....++ +++.+. +..+.+.+.+. .+++..+|+.||++++|
T Consensus 202 ~l~~~~~~~~----l~i~G~-----~~~~~~~~----~~~~~~-------~~~~~v~~~g~--~~~~~~~~~~ad~~i~p 259 (348)
T cd03820 202 KIAKKHPDWK----LRIVGD-----GPEREALE----ALIKEL-------GLEDRVILLGF--TKNIEEYYAKASIFVLT 259 (348)
T ss_pred HHHhcCCCeE----EEEEeC-----CCCHHHHH----HHHHHc-------CCCCeEEEcCC--cchHHHHHHhCCEEEeC
Confidence 9988888765 888883 23333333 333332 22344555554 68999999999999999
Q ss_pred CCccCCCC---CCC-CCceEEEeccccccccc----CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCC
Q 044635 443 AVRDGSEP---SSP-KKSMLVVSEFIGCSPSL----SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHD 514 (831)
Q Consensus 443 S~~eGma~---~~~-~~g~lVlSe~~G~~~~l----~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 514 (831)
|..||+.. ++. .+.|+|+|...|..+++ ..|+++++.|+++++++|.++++.+ +.+....+..++.+.+++
T Consensus 260 s~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~ 338 (348)
T cd03820 260 SRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDE-ELRKRMGANARESAERFS 338 (348)
T ss_pred ccccccCHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhC
Confidence 99999821 222 24577777765555444 2689999999999999999999754 344444445577788888
Q ss_pred HHHHHHHHH
Q 044635 515 VGYWARSFL 523 (831)
Q Consensus 515 ~~~W~~~~l 523 (831)
+...++++.
T Consensus 339 ~~~~~~~~~ 347 (348)
T cd03820 339 IENIIKQWE 347 (348)
T ss_pred HHHHHHHhc
Confidence 888777664
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.3e-14 Score=157.39 Aligned_cols=236 Identities=12% Similarity=0.097 Sum_probs=154.4
Q ss_pred HHHHHcCCCCCEEEEeCccccchHHHHHhhc-CCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHH
Q 044635 193 RIMEVINPEDDFVWVHDYHLMVLPTFLRKRF-NRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARH 271 (831)
Q Consensus 193 ~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~-~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~ 271 (831)
++.+..+| |+|++|+.....+..++++.. ...++..+.|..++....+. ...+-.+|.+-..+..-.+.
T Consensus 78 ~~l~~~~~--Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~--------~~~~~~~d~~i~~S~~~~~~ 147 (359)
T PRK09922 78 KWLKETQP--DIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAE--------CKKITCADYHLAISSGIKEQ 147 (359)
T ss_pred HHHHhcCC--CEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchhh--------hhhhhcCCEEEEcCHHHHHH
Confidence 34455555 899999987777666666543 33556666776554432221 11235688888777655444
Q ss_pred HHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcc--
Q 044635 272 FLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMD-- 349 (831)
Q Consensus 272 Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld-- 349 (831)
+.. .+. ...++.++|+|||.+.+... .+ .. .++++++++||+.
T Consensus 148 ~~~-----~~~---------------~~~ki~vi~N~id~~~~~~~--~~-----------~~--~~~~~i~~~Grl~~~ 192 (359)
T PRK09922 148 MMA-----RGI---------------SAQRISVIYNPVEIKTIIIP--PP-----------ER--DKPAVFLYVGRLKFE 192 (359)
T ss_pred HHH-----cCC---------------CHHHEEEEcCCCCHHHccCC--Cc-----------cc--CCCcEEEEEEEEecc
Confidence 432 121 11246678999997654211 00 01 3467899999996
Q ss_pred cccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCC--CHH
Q 044635 350 IFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPL--KFY 427 (831)
Q Consensus 350 ~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v--~~~ 427 (831)
..||+..+++|+.++ .+ ++.|+++| +|++.+++ ++++++.| ...-+.+.|.+ +.+
T Consensus 193 ~~k~~~~l~~a~~~~---~~----~~~l~ivG-----~g~~~~~l----~~~~~~~~-------l~~~v~f~G~~~~~~~ 249 (359)
T PRK09922 193 GQKNVKELFDGLSQT---TG----EWQLHIIG-----DGSDFEKC----KAYSRELG-------IEQRIIWHGWQSQPWE 249 (359)
T ss_pred cCcCHHHHHHHHHhh---CC----CeEEEEEe-----CCccHHHH----HHHHHHcC-------CCCeEEEecccCCcHH
Confidence 459999999999876 22 35699888 34443344 44444432 22234455554 458
Q ss_pred HHHHHHHHcCEeEECCCccCCC---CCCCC-CceEEEec-ccccccccC---CCceeCCCCHHHHHHHHHHHhcCCH
Q 044635 428 ERIAYYVVAECCLVTAVRDGSE---PSSPK-KSMLVVSE-FIGCSPSLS---GAIRVNPWNIDAVSDAMDSALEMAD 496 (831)
Q Consensus 428 el~aly~~ADv~vvtS~~eGma---~~~~~-~g~lVlSe-~~G~~~~l~---~allVnP~d~~~~A~ai~~aL~m~~ 496 (831)
++..+|+.||++|+||..|||. .+++. +.|+|+|. ..|+.+.+. +|++|+|.|++++|++|.+.++.++
T Consensus 250 ~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~ 326 (359)
T PRK09922 250 VVQQKIKNVSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVISGEV 326 (359)
T ss_pred HHHHHHhcCcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHHhCcc
Confidence 9999999999999999999982 12222 45778887 677666663 5899999999999999999998764
|
|
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.60 E-value=2e-14 Score=157.23 Aligned_cols=188 Identities=18% Similarity=0.197 Sum_probs=131.4
Q ss_pred eecccChHHHHHhhCCcchHHHHHHHHHHhc-c-CCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEec
Q 044635 305 LPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-D-QGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIAN 382 (831)
Q Consensus 305 ~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~-~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~ 382 (831)
+|.|||.+.|.+.. ....+++++++ . .+..++++|||+++.||+..+++|++++.+++|++..++.|+++|.
T Consensus 118 I~~GVD~~~f~p~~------~~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~ 191 (335)
T PHA01633 118 VFHGINFKIVENAE------KLVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH 191 (335)
T ss_pred eeCCCChhhcCccc------hhhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH
Confidence 56799999885321 11234555553 1 4678899999999999999999999999999999876777877761
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEec--CCCCHHHHHHHHHHcCEeEECCCccCCC---CCCCC-Cc
Q 044635 383 PARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLID--EPLKFYERIAYYVVAECCLVTAVRDGSE---PSSPK-KS 456 (831)
Q Consensus 383 p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~--~~v~~~el~aly~~ADv~vvtS~~eGma---~~~~~-~g 456 (831)
. ++.++ +..+ .|.+.. +.++.+++.++|+.||++|+||..|||. .+++. +.
T Consensus 192 ------~-------~~~~l--------~l~~--~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~ 248 (335)
T PHA01633 192 ------K-------QFTQL--------EVPA--NVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGT 248 (335)
T ss_pred ------H-------HHHHc--------CCCC--cEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCC
Confidence 1 11111 1111 355553 6778999999999999999999999982 23333 34
Q ss_pred eEEEecccccccccC---------------------CCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCH
Q 044635 457 MLVVSEFIGCSPSLS---------------------GAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDV 515 (831)
Q Consensus 457 ~lVlSe~~G~~~~l~---------------------~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~ 515 (831)
|+|+|...|..+..+ .|+.++++|++++|++|.+++.+.+.+ +|..+.++..+++++
T Consensus 249 PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~~~--~~~~~~~~~a~~f~~ 326 (335)
T PHA01633 249 PVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQDRE--ERSMKLKELAKKYDI 326 (335)
T ss_pred CEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccChh--hhhHHHHHHHHhcCH
Confidence 666665554443222 145788999999999999998876432 334456677888887
Q ss_pred HHHHHHHH
Q 044635 516 GYWARSFL 523 (831)
Q Consensus 516 ~~W~~~~l 523 (831)
..-+++++
T Consensus 327 ~~~~~~~~ 334 (335)
T PHA01633 327 RNLYTRFL 334 (335)
T ss_pred HHHHHHhh
Confidence 77766654
|
|
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.6e-14 Score=161.12 Aligned_cols=182 Identities=13% Similarity=-0.017 Sum_probs=120.9
Q ss_pred eecccChHHHHHhhCCcchHHHHHHHHHHhccCC--cEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEec
Q 044635 305 LPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQG--KVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIAN 382 (831)
Q Consensus 305 ~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~--~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~ 382 (831)
.+.|||.+.|..... .+++.+.+.+ .+++++||||.+.||+..+|+||.++.+..|+++ |+++|
T Consensus 201 ~v~GVd~~~f~~~~~---------~~~~~~~~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~~----l~ivG- 266 (462)
T PLN02846 201 NVHGVNPKFLEIGKL---------KLEQQKNGEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKELSGLE----VDLYG- 266 (462)
T ss_pred cCceechhhcCCCcc---------cHhhhcCCCCCcceEEEEEecCcccCCHHHHHHHHHHHHhhCCCeE----EEEEC-
Confidence 357999988753221 1222332122 4579999999999999999999999988888765 88888
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCC---CCCCCCceEE
Q 044635 383 PARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSE---PSSPKKSMLV 459 (831)
Q Consensus 383 p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma---~~~~~~g~lV 459 (831)
+|++.+++++.+.+ .+ + .++++.|..+.+ ++|+.+|+||+||.+||+. .+++..|.+|
T Consensus 267 ----dGp~~~~L~~~a~~----l~-------l-~~~vf~G~~~~~---~~~~~~DvFv~pS~~Et~g~v~lEAmA~G~PV 327 (462)
T PLN02846 267 ----SGEDSDEVKAAAEK----LE-------L-DVRVYPGRDHAD---PLFHDYKVFLNPSTTDVVCTTTAEALAMGKIV 327 (462)
T ss_pred ----CCccHHHHHHHHHh----cC-------C-cEEEECCCCCHH---HHHHhCCEEEECCCcccchHHHHHHHHcCCcE
Confidence 67776555554443 22 2 144466654443 6899999999999999982 2344445444
Q ss_pred Eeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHH
Q 044635 460 VSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLE 527 (831)
Q Consensus 460 lSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 527 (831)
++...+..+.+ .+|+.+ .|.++++++|.++|+.++++... .. ...+++..=++++++.++
T Consensus 328 Va~~~~~~~~v~~~~ng~~~--~~~~~~a~ai~~~l~~~~~~~~~---~a---~~~~SWe~~~~~l~~~~~ 390 (462)
T PLN02846 328 VCANHPSNEFFKQFPNCRTY--DDGKGFVRATLKALAEEPAPLTD---AQ---RHELSWEAATERFLRVAD 390 (462)
T ss_pred EEecCCCcceeecCCceEec--CCHHHHHHHHHHHHccCchhHHH---HH---HHhCCHHHHHHHHHHHhc
Confidence 44444445555 355566 48999999999999855433221 11 136777777777776654
|
|
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.4e-13 Score=157.09 Aligned_cols=263 Identities=10% Similarity=0.021 Sum_probs=157.4
Q ss_pred CCEEEEeCcccc--chHHHHHhhcCCCeEEEEEeccCCChHHhhcCCCh-------HHHHHHH-hcCCeEeecCHHhHHH
Q 044635 202 DDFVWVHDYHLM--VLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIR-------EEILRAL-LNSDLIGFHTFDYARH 271 (831)
Q Consensus 202 ~d~vwvhDyhL~--llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r-------~eil~~l-l~~dligf~t~~~~~~ 271 (831)
.|+|.+|..... .+...+-.+..+.|+.+.+|--+++..-. ..+.. ..+-+-+ -.||.|-..+....+.
T Consensus 96 ~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~ad~ii~vS~~~~~~ 174 (415)
T cd03816 96 ADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTILAL-KLGENHPLVRLAKWYEKLFGRLADYNLCVTKAMKED 174 (415)
T ss_pred CCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHHhc-ccCCCCHHHHHHHHHHHHHhhcCCEeeecCHHHHHH
Confidence 489999975432 22233334445789999999644321100 01100 0111111 2367776666543333
Q ss_pred HHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHH-------------Hhc--c
Q 044635 272 FLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIK-------------QFH--D 336 (831)
Q Consensus 272 Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~-------------~~~--~ 336 (831)
+.+ ++....+|.++|+| +...|.+... ........+ ..+ .
T Consensus 175 l~~--------------------~~~~~~ki~vI~Ng-~~~~f~p~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (415)
T cd03816 175 LQQ--------------------FNNWKIRATVLYDR-PPEQFRPLPL----EEKHELFLKLAKTFLTRELRIGAVQLSE 229 (415)
T ss_pred HHh--------------------hhccCCCeeecCCC-CHHHceeCcH----HHHHHHHHhccccccccccccccceecC
Confidence 221 11123467789998 4555543211 111111111 111 2
Q ss_pred CCcEEEEeccCcccccCHHHHHHHHHHHHHh------CCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCC
Q 044635 337 QGKVMLLGVDDMDIFKGISLKLLAMEQLLIQ------HPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFG 410 (831)
Q Consensus 337 ~~~~iil~VdRld~~KGi~~~l~A~~~lL~~------~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g 410 (831)
++..+++++||+.+.||+..+|+|+..+.+. +|+ +.|+++| +|+..+++++.+ ++.
T Consensus 230 ~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~----i~l~ivG-----~G~~~~~l~~~~----~~~----- 291 (415)
T cd03816 230 ERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPK----LLCIITG-----KGPLKEKYLERI----KEL----- 291 (415)
T ss_pred CCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCC----EEEEEEe-----cCccHHHHHHHH----HHc-----
Confidence 3457889999999999999999999998763 354 4599888 444444444444 332
Q ss_pred CCCCccEEEecCCCCHHHHHHHHHHcCEeEECC---CccCCC---CCCCC-CceEEEeccccccccc---CCCceeCCCC
Q 044635 411 KPGYDPVVLIDEPLKFYERIAYYVVAECCLVTA---VRDGSE---PSSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWN 480 (831)
Q Consensus 411 ~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS---~~eGma---~~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d 480 (831)
+...++++.+.++.+++..+|++||++|+++ ..+|+. .+++. +.|+|+|...|..+.+ .+|++|+ |
T Consensus 292 --~l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d 367 (415)
T cd03816 292 --KLKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--D 367 (415)
T ss_pred --CCCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--C
Confidence 3346888888899999999999999998642 235541 11122 4577788877777666 3588884 8
Q ss_pred HHHHHHHHHHHhcCC--HHHHHHHHHHHhhhhcc
Q 044635 481 IDAVSDAMDSALEMA--DQEKQLRHEKHYRYVST 512 (831)
Q Consensus 481 ~~~~A~ai~~aL~m~--~~er~~r~~~~~~~v~~ 512 (831)
++++|++|.++++.+ +++++...+..++....
T Consensus 368 ~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~~ 401 (415)
T cd03816 368 SEELAEQLIDLLSNFPNRGKLNSLKKGAQEESEL 401 (415)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhhc
Confidence 999999999999872 55555555555655543
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.6e-13 Score=150.14 Aligned_cols=272 Identities=15% Similarity=0.117 Sum_probs=177.3
Q ss_pred HHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCC-ChHHH-HHHHhcCCeEeecCHHhHHHHH
Q 044635 196 EVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLP-IREEI-LRALLNSDLIGFHTFDYARHFL 273 (831)
Q Consensus 196 ~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp-~r~ei-l~~ll~~dligf~t~~~~~~Fl 273 (831)
+..+| |+|++|..+..++..++.+.....++.+.+|...+......... ....+ -..+-.+|.+.+.+....+.+.
T Consensus 77 ~~~~~--dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~ 154 (359)
T cd03808 77 RKERP--DIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTSGGLKRRLYLLLERLALRFTDKVIFQNEDDRDLAL 154 (359)
T ss_pred HhcCC--CEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhccchhHHHHHHHHHHHHHhhccEEEEcCHHHHHHHH
Confidence 33455 89999988877777777665666778888886433211100000 00111 1123357899988887777665
Q ss_pred HHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccC
Q 044635 274 SCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKG 353 (831)
Q Consensus 274 ~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KG 353 (831)
+.- .. .....+.+.|+|+|...+..... . .. .++..++++||+.+.||
T Consensus 155 ~~~----~~--------------~~~~~~~~~~~~~~~~~~~~~~~-----~-------~~--~~~~~i~~~G~~~~~k~ 202 (359)
T cd03808 155 KLG----II--------------KKKKTVLIPGSGVDLDRFSPSPE-----P-------IP--EDDPVFLFVARLLKDKG 202 (359)
T ss_pred Hhc----CC--------------CcCceEEecCCCCChhhcCcccc-----c-------cC--CCCcEEEEEeccccccC
Confidence 411 00 01235667899999877642211 0 11 56789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHH
Q 044635 354 ISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYY 433 (831)
Q Consensus 354 i~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly 433 (831)
+..+++|+..+.+++|+++ |+++|.... . ...... ++...+ . -..|.+ .+. .+++..+|
T Consensus 203 ~~~li~~~~~l~~~~~~~~----l~i~G~~~~---~--~~~~~~---~~~~~~----~--~~~v~~-~g~--~~~~~~~~ 261 (359)
T cd03808 203 IDELLEAARILKAKGPNVR----LLLVGDGDE---E--NPAAIL---EIEKLG----L--EGRVEF-LGF--RDDVPELL 261 (359)
T ss_pred HHHHHHHHHHHHhcCCCeE----EEEEcCCCc---c--hhhHHH---HHHhcC----C--cceEEE-eec--cccHHHHH
Confidence 9999999999988788765 888885331 1 111111 122211 1 113444 444 67899999
Q ss_pred HHcCEeEECCCccCCCC---CC-CCCceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 044635 434 VVAECCLVTAVRDGSEP---SS-PKKSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKH 506 (831)
Q Consensus 434 ~~ADv~vvtS~~eGma~---~~-~~~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~ 506 (831)
+.||++++||.+||+.. ++ ..+.|+|+|...|..+.+ ..|+++++.|+++++++|.+++..+ +.+....+..
T Consensus 262 ~~adi~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~-~~~~~~~~~~ 340 (359)
T cd03808 262 AAADVFVLPSYREGLPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDP-ELRARMGQAA 340 (359)
T ss_pred HhccEEEecCcccCcchHHHHHHHcCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhCH-HHHHHHHHHH
Confidence 99999999999998821 22 225578888888887776 3589999999999999999988654 4444445556
Q ss_pred hhh-hccCCHHHHHHHHH
Q 044635 507 YRY-VSTHDVGYWARSFL 523 (831)
Q Consensus 507 ~~~-v~~~~~~~W~~~~l 523 (831)
+++ ...++...+++.++
T Consensus 341 ~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 341 RKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHHHhcCHHHHHHHhh
Confidence 666 57788888877664
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.55 E-value=8.4e-14 Score=160.22 Aligned_cols=314 Identities=13% Similarity=0.138 Sum_probs=174.8
Q ss_pred EeCChHhhhhHhhhhhcccc--ccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCc-cccc
Q 044635 138 TFLPPDLFSRYYHGFCKQQL--WPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDY-HLMV 214 (831)
Q Consensus 138 v~l~~~~~~~~y~gf~~~~l--Wp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDy-hL~l 214 (831)
+|=++++++.|......+-. -|-|-.. ++| ++|..+.- .-.-+-.. .+ .+...+| |+|.+|.- ||-.
T Consensus 379 ~F~~p~eQe~~ir~wl~~r~g~~~~~~i~--fYp---g~~~~~~~-SI~p~gdI-~~-~L~~f~P--DVVHLatP~~LGw 448 (794)
T PLN02501 379 TFSSPEEQESYIRNWLEERIGFKADFKIS--FYP---GKFSKERR-SIIPAGDT-SQ-FIPSKDA--DIAILEEPEHLNW 448 (794)
T ss_pred ccCCHHHHHHHHHHHHHHhcCCCCCceEE--eec---chhccCCc-cccchHHH-HH-HhhccCC--CEEEECCchhhcc
Confidence 78888888888877663321 1222111 222 33432211 11111111 11 1223344 89998853 3444
Q ss_pred h--HHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHH--HHHHhCCeecccCce
Q 044635 215 L--PTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSC--CSRMLGLTYESKRGY 290 (831)
Q Consensus 215 l--p~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~--~~r~l~~~~~~~~~~ 290 (831)
. ....-+++. ++...+||.||.+=-+..+..-+.++. .++++|+.. |++++.++.....
T Consensus 449 ~~~Glr~ArKl~--PVVasyHTny~eYl~~y~~g~L~~~ll-------------k~l~~~v~r~hcD~VIaPS~atq~-- 511 (794)
T PLN02501 449 YHHGKRWTDKFN--HVVGVVHTNYLEYIKREKNGALQAFFV-------------KHINNWVTRAYCHKVLRLSAATQD-- 511 (794)
T ss_pred HHHHHHHHHHcC--CeEEEEeCCcHHHHhHhcchhHHHHHH-------------HHHHHHHHHhhCCEEEcCCHHHHH--
Confidence 4 222333443 699999999985322222221111111 233344443 6666665522211
Q ss_pred eeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccccCHHHHHHHHHHHHHhCC
Q 044635 291 IGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHP 369 (831)
Q Consensus 291 ~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P 369 (831)
+. +. .|. ...|||++.|.+... ... +.+++ ....+.+++||||.+.||+..+|+|+..+.++.|
T Consensus 512 ----L~-~~-vI~-nVnGVDte~F~P~~r-------~~~-~r~lgi~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~p 576 (794)
T PLN02501 512 ----LP-KS-VIC-NVHGVNPKFLKIGEK-------VAE-ERELGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELD 576 (794)
T ss_pred ----hc-cc-cee-ecccccccccCCcch-------hHH-HHhcCCccccCceEEEEcccccCCHHHHHHHHHHHHhhCC
Confidence 11 11 111 115999998864321 011 13343 2233568999999999999999999999988888
Q ss_pred CCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCC
Q 044635 370 EWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSE 449 (831)
Q Consensus 370 ~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma 449 (831)
+++ |+++| +|++.+++++. +.+.+ . .|+|+ +.. ++..++|+.|||||+||.+|||.
T Consensus 577 nvr----LvIVG-----DGP~reeLe~l----a~eLg-------L-~V~FL-G~~--dd~~~lyasaDVFVlPS~sEgFG 632 (794)
T PLN02501 577 GFN----LDVFG-----NGEDAHEVQRA----AKRLD-------L-NLNFL-KGR--DHADDSLHGYKVFINPSISDVLC 632 (794)
T ss_pred CeE----EEEEc-----CCccHHHHHHH----HHHcC-------C-EEEec-CCC--CCHHHHHHhCCEEEECCCcccch
Confidence 765 88888 56655455444 44322 1 25554 433 34458999999999999999992
Q ss_pred ---CCCCCCc-eEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHH
Q 044635 450 ---PSSPKKS-MLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSF 522 (831)
Q Consensus 450 ---~~~~~~g-~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~ 522 (831)
.+++.+| |+|++...| .+.+ .++++ +.|+++++++|.++|..++. + ..++. ...+++..-++++
T Consensus 633 lVlLEAMA~GlPVVATd~pG-~e~V~~g~nGll--~~D~EafAeAI~~LLsd~~~-r-l~~~a----~~~~SWeAaadrL 703 (794)
T PLN02501 633 TATAEALAMGKFVVCADHPS-NEFFRSFPNCLT--YKTSEDFVAKVKEALANEPQ-P-LTPEQ----RYNLSWEAATQRF 703 (794)
T ss_pred HHHHHHHHcCCCEEEecCCC-CceEeecCCeEe--cCCHHHHHHHHHHHHhCchh-h-hHHHH----HhhCCHHHHHHHH
Confidence 2333345 666666655 4434 23433 37899999999999987652 2 22221 2366777767766
Q ss_pred HHHH
Q 044635 523 LQDL 526 (831)
Q Consensus 523 l~~l 526 (831)
++..
T Consensus 704 le~~ 707 (794)
T PLN02501 704 MEYS 707 (794)
T ss_pred HHhh
Confidence 6543
|
|
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.9e-13 Score=155.07 Aligned_cols=182 Identities=12% Similarity=0.006 Sum_probs=115.2
Q ss_pred EEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccC-c-ccccCHHHHHHHHHHHHHhCCCCCCcEEE
Q 044635 300 VSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDD-M-DIFKGISLKLLAMEQLLIQHPEWQGKVVL 377 (831)
Q Consensus 300 ~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdR-l-d~~KGi~~~l~A~~~lL~~~P~~~~~vvL 377 (831)
.++.++|+|||++.+..... . ...+ . ..++++|++|+| + ++.||+..+++|+.++ .+ ++.|
T Consensus 212 ~~i~vI~NGid~~~~~~~~~---~----~~~~-~--~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~----~~~L 274 (405)
T PRK10125 212 GRCRIINNGIDMATEAILAE---L----PPVR-E--TQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GD----KIEL 274 (405)
T ss_pred CCEEEeCCCcCccccccccc---c----cccc-c--CCCCCEEEEEEeccccCCccHHHHHHHHHhC---CC----CeEE
Confidence 36788999999754321100 0 0101 1 156788999999 4 4789999999999875 23 3558
Q ss_pred EEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCC---CCCCC
Q 044635 378 VQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSE---PSSPK 454 (831)
Q Consensus 378 vqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma---~~~~~ 454 (831)
+++|... ... . ..+.++....+..++..+|+.||+||+||..|||. .+++.
T Consensus 275 ~ivG~g~-----~~~-----------------~----~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA 328 (405)
T PRK10125 275 HTFGKFS-----PFT-----------------A----GNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALS 328 (405)
T ss_pred EEEcCCC-----ccc-----------------c----cceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHH
Confidence 8888421 100 0 02444432346789999999999999999999992 23333
Q ss_pred -CceEEEeccccccccc--CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhh-hccCCHHHHHHHHHHHH
Q 044635 455 -KSMLVVSEFIGCSPSL--SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRY-VSTHDVGYWARSFLQDL 526 (831)
Q Consensus 455 -~g~lVlSe~~G~~~~l--~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~-v~~~~~~~W~~~~l~~l 526 (831)
+.|+|+|..+|..+.+ .+|++|+|.|++++|+++...+... +........++. ...++....++++++-.
T Consensus 329 ~G~PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~~--~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY 402 (405)
T PRK10125 329 IGVPVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQA--VFGTTLAEFSQRSRAAYSGQQMLEEYVNFY 402 (405)
T ss_pred cCCCEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHHH--hhhhHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 4577777777765555 4699999999999998654332110 000011223333 45688888777766544
|
|
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.3e-13 Score=146.94 Aligned_cols=237 Identities=17% Similarity=0.147 Sum_probs=154.2
Q ss_pred CEEEEeCc-cccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhC
Q 044635 203 DFVWVHDY-HLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLG 281 (831)
Q Consensus 203 d~vwvhDy-hL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~ 281 (831)
|+|++|++ ...++..+ ..+. +.++.+.+|..++...... .+........+..+|.+-+.+....+.+.... +
T Consensus 83 dii~~~~~~~~~~~~~~-~~~~-~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~----~ 155 (353)
T cd03811 83 DVVISHLTTTPNVLALL-AARL-GTKLIVWEHNSLSLELKRK-LRLLLLIRKLYRRADKIVAVSEGVKEDLLKLL----G 155 (353)
T ss_pred CEEEEcCccchhHHHHH-Hhhc-CCceEEEEcCcchhhhccc-hhHHHHHHhhccccceEEEeccchhhhHHHhh----c
Confidence 89999988 44444333 3333 7899999998776432211 11111234455668888887776665554321 0
Q ss_pred CeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccccCHHHHHHH
Q 044635 282 LTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIFKGISLKLLA 360 (831)
Q Consensus 282 ~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~KGi~~~l~A 360 (831)
....++.++|+|+|...+..... .. . ++. ..++.+++++||+.+.||+..+++|
T Consensus 156 ---------------~~~~~~~vi~~~~~~~~~~~~~~-----~~--~---~~~~~~~~~~i~~~g~~~~~k~~~~~i~~ 210 (353)
T cd03811 156 ---------------IPPDKIEVIYNPIDIEEIRALAE-----EP--L---ELGIPPDGPVILAVGRLSPQKGFDTLIRA 210 (353)
T ss_pred ---------------CCccccEEecCCcChhhcCcccc-----hh--h---hcCCCCCceEEEEEecchhhcChHHHHHH
Confidence 01346778999999887643211 00 0 222 3678899999999999999999999
Q ss_pred HHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeE
Q 044635 361 MEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCL 440 (831)
Q Consensus 361 ~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v 440 (831)
+.++.+++++++ |+++|. ++...+++ +++.+.+ ..+.+.+.+.+ +++..+|+.||+++
T Consensus 211 ~~~l~~~~~~~~----l~i~G~-----~~~~~~~~----~~~~~~~-------~~~~v~~~g~~--~~~~~~~~~~d~~i 268 (353)
T cd03811 211 FALLRKEGPDAR----LVILGD-----GPLREELE----ALAKELG-------LADRVHFLGFQ--SNPYPYLKAADLFV 268 (353)
T ss_pred HHHhhhcCCCce----EEEEcC-----CccHHHHH----HHHHhcC-------CCccEEEeccc--CCHHHHHHhCCEEE
Confidence 999988777665 888883 23333333 3333322 12333445553 46889999999999
Q ss_pred ECCCccCCCC---CCC-CCceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhc
Q 044635 441 VTAVRDGSEP---SSP-KKSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALE 493 (831)
Q Consensus 441 vtS~~eGma~---~~~-~~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~ 493 (831)
+||..||+.. ++. .+.|+|+|+..|..+.+ .+|++++|.|.+++++.+..+..
T Consensus 269 ~ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~ 328 (353)
T cd03811 269 LSSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALLD 328 (353)
T ss_pred eCcccCCCCcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHHh
Confidence 9999999821 222 24577778777777666 35899999999999544444433
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.54 E-value=5.3e-13 Score=147.65 Aligned_cols=255 Identities=16% Similarity=0.130 Sum_probs=161.2
Q ss_pred CCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCC-hHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHh
Q 044635 202 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPI-REEILRALLNSDLIGFHTFDYARHFLSCCSRML 280 (831)
Q Consensus 202 ~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~-r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l 280 (831)
.|+|++|....+.....+... .+.+..+++|........+. .. +.-.-..+..+|.+.+.+..+.+.+.. .
T Consensus 84 ~Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~----~- 155 (357)
T cd03795 84 ADVIHLHFPNPLADLALLLLP-RKKPVVVHWHSDIVKQKLLL--KLYRPLQRRFLRRADAIVATSPNYAETSPV----L- 155 (357)
T ss_pred CCEEEEecCcchHHHHHHHhc-cCceEEEEEcChhhccchhh--hhhhHHHHHHHHhcCEEEeCcHHHHHHHHH----h-
Confidence 389999976544332222222 46788889996432221110 11 111223455688888887766654432 0
Q ss_pred CCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHH
Q 044635 281 GLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLA 360 (831)
Q Consensus 281 ~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A 360 (831)
.....++.++|+|+|...+..... . .. .......++.+|+++||+.+.||+..+++|
T Consensus 156 ---------------~~~~~~~~~i~~gi~~~~~~~~~~-----~-~~--~~~~~~~~~~~i~~~G~~~~~K~~~~li~a 212 (357)
T cd03795 156 ---------------RRFRDKVRVIPLGLDPARYPRPDA-----L-EE--AIWRRAAGRPFFLFVGRLVYYKGLDVLLEA 212 (357)
T ss_pred ---------------cCCccceEEecCCCChhhcCCcch-----h-hh--HhhcCCCCCcEEEEecccccccCHHHHHHH
Confidence 011146778999999887642111 0 01 111113567899999999999999999999
Q ss_pred HHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeE
Q 044635 361 MEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCL 440 (831)
Q Consensus 361 ~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v 440 (831)
++++. ++.|+++|. ++... ++.+++.+. +..+-+.+.|.++.+++..+|+.||+++
T Consensus 213 ~~~l~--------~~~l~i~G~-----g~~~~----~~~~~~~~~-------~~~~~V~~~g~v~~~~~~~~~~~ad~~i 268 (357)
T cd03795 213 AAALP--------DAPLVIVGE-----GPLEA----ELEALAAAL-------GLLDRVRFLGRLDDEEKAALLAACDVFV 268 (357)
T ss_pred HHhcc--------CcEEEEEeC-----ChhHH----HHHHHHHhc-------CCcceEEEcCCCCHHHHHHHHHhCCEEE
Confidence 98873 455888883 33333 333333222 2223445678999999999999999999
Q ss_pred ECCC--ccCCCC---CCCC-CceEEEeccccccccc----CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhh
Q 044635 441 VTAV--RDGSEP---SSPK-KSMLVVSEFIGCSPSL----SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYV 510 (831)
Q Consensus 441 vtS~--~eGma~---~~~~-~g~lVlSe~~G~~~~l----~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v 510 (831)
+||. .||+.. ++.. +.|+|+|+..|..+.+ ..|++++|.|+++++++|.++++.+ +++....++.++++
T Consensus 269 ~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~-~~~~~~~~~~~~~~ 347 (357)
T cd03795 269 FPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLEDP-ELRERLGEAARERA 347 (357)
T ss_pred eCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHH
Confidence 9996 477621 2222 4567777766666655 2578999999999999999999854 44555555566665
Q ss_pred cc
Q 044635 511 ST 512 (831)
Q Consensus 511 ~~ 512 (831)
.+
T Consensus 348 ~~ 349 (357)
T cd03795 348 EE 349 (357)
T ss_pred HH
Confidence 44
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.52 E-value=9.3e-13 Score=145.31 Aligned_cols=207 Identities=14% Similarity=0.085 Sum_probs=138.8
Q ss_pred cCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhcc
Q 044635 257 NSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHD 336 (831)
Q Consensus 257 ~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~ 336 (831)
.+|.|-..+......+... +. ....++.++|+|||.+.|.+... ..
T Consensus 94 ~ad~ii~~S~~~~~~l~~~-----g~--------------~~~~~i~vIpNGVd~~~f~~~~~-------------~~-- 139 (331)
T PHA01630 94 PVDEIVVPSQWSKNAFYTS-----GL--------------KIPQPIYVIPHNLNPRMFEYKPK-------------EK-- 139 (331)
T ss_pred cCCEEEECCHHHHHHHHHc-----CC--------------CCCCCEEEECCCCCHHHcCCCcc-------------cc--
Confidence 4888888887665555421 11 00125778999999887742100 11
Q ss_pred CCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCcc
Q 044635 337 QGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDP 416 (831)
Q Consensus 337 ~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~p 416 (831)
.++.++++++|+.+.||++.+|+|++++.+++|+++ |+++|.. .. +. ++. + + .+
T Consensus 140 ~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~----llivG~~-----~~--~~--~l~------~--~--~~--- 193 (331)
T PHA01630 140 PHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFY----FLIKSSN-----ML--DP--RLF------G--L--NG--- 193 (331)
T ss_pred CCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEE----EEEEeCc-----cc--ch--hhc------c--c--cc---
Confidence 345677788899999999999999999988887655 8888821 11 11 110 0 0 11
Q ss_pred EEEecCCCCHHHHHHHHHHcCEeEECCCccCCC---CCCCC-CceEEEecccccccccC---C-----------------
Q 044635 417 VVLIDEPLKFYERIAYYVVAECCLVTAVRDGSE---PSSPK-KSMLVVSEFIGCSPSLS---G----------------- 472 (831)
Q Consensus 417 v~~~~~~v~~~el~aly~~ADv~vvtS~~eGma---~~~~~-~g~lVlSe~~G~~~~l~---~----------------- 472 (831)
+.+.++.+++..+|+.||+||+||..|||+ .+++. +.|+|+|..+|..+.+. +
T Consensus 194 ---~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~ 270 (331)
T PHA01630 194 ---VKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNP 270 (331)
T ss_pred ---eeccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCC
Confidence 134688999999999999999999999882 13333 45777777766666552 2
Q ss_pred ---CceeCCCCHHHHHHHHHHHhcCC-HHHHHHH-HHHHhhhhccCCHHHHHHHHHHHHH
Q 044635 473 ---AIRVNPWNIDAVSDAMDSALEMA-DQEKQLR-HEKHYRYVSTHDVGYWARSFLQDLE 527 (831)
Q Consensus 473 ---allVnP~d~~~~A~ai~~aL~m~-~~er~~r-~~~~~~~v~~~~~~~W~~~~l~~l~ 527 (831)
|++++| |.++++++|.++|..+ +++++.+ ........+++++...++++++-++
T Consensus 271 ~~~G~~v~~-~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~ 329 (331)
T PHA01630 271 IHVGYFLDP-DIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILE 329 (331)
T ss_pred cccccccCC-CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 445566 7888999999999864 2333333 3344556788999999998877664
|
|
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.6e-12 Score=144.24 Aligned_cols=264 Identities=13% Similarity=0.032 Sum_probs=161.1
Q ss_pred CEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHH-----HHHhcCCeEeecCHHhHHHHHHHHH
Q 044635 203 DFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEIL-----RALLNSDLIGFHTFDYARHFLSCCS 277 (831)
Q Consensus 203 d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil-----~~ll~~dligf~t~~~~~~Fl~~~~ 277 (831)
|+++||.......+....-+..+.++.+.+|..-.....+.. ....++ ..+-.+|.|-+.+....+.+..
T Consensus 86 ~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~--~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~--- 160 (363)
T cd04955 86 DIDHVHALGPAIAPFLPLLRLKGKKVVVNMDGLEWKRAKWGR--PAKRYLKFGEKLAVKFADRLIADSPGIKEYLKE--- 160 (363)
T ss_pred CeEEEEecCccHHHHHHHHHhcCCCEEEEccCcceeeccccc--chhHHHHHHHHHHHhhccEEEeCCHHHHHHHHH---
Confidence 667777655543333222222367888888852111111100 011111 2344678888877655444321
Q ss_pred HHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHH
Q 044635 278 RMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLK 357 (831)
Q Consensus 278 r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~ 357 (831)
.. |... .++|+|+|...+.. ....++.++..+++.++++||+.+.||+..+
T Consensus 161 -~~----------------~~~~--~~i~ngv~~~~~~~----------~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~l 211 (363)
T cd04955 161 -KY----------------GRDS--TYIPYGADHVVSSE----------EDEILKKYGLEPGRYYLLVGRIVPENNIDDL 211 (363)
T ss_pred -hc----------------CCCC--eeeCCCcChhhcch----------hhhhHHhcCCCCCcEEEEEecccccCCHHHH
Confidence 11 1111 67899999876532 0122333332345568899999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcC
Q 044635 358 LLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAE 437 (831)
Q Consensus 358 l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~AD 437 (831)
++|+.++.. ++.|+++|... ...++.+++.+. ++. .+.+.+.|.++.+++..+|+.||
T Consensus 212 i~a~~~l~~-------~~~l~ivG~~~-----~~~~~~~~~~~~-------~~~---~~~V~~~g~~~~~~~~~~~~~ad 269 (363)
T cd04955 212 IEAFSKSNS-------GKKLVIVGNAD-----HNTPYGKLLKEK-------AAA---DPRIIFVGPIYDQELLELLRYAA 269 (363)
T ss_pred HHHHHhhcc-------CceEEEEcCCC-----CcchHHHHHHHH-------hCC---CCcEEEccccChHHHHHHHHhCC
Confidence 999987632 34588888532 112333333321 111 13345678999999999999999
Q ss_pred EeEECCCc-cCCC---CCCCC-CceEEEeccccccccc-CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhc
Q 044635 438 CCLVTAVR-DGSE---PSSPK-KSMLVVSEFIGCSPSL-SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVS 511 (831)
Q Consensus 438 v~vvtS~~-eGma---~~~~~-~g~lVlSe~~G~~~~l-~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~ 511 (831)
++++||.. ||+. .++.. +.|+|+|...|..+.+ .++.+++|.|. +|++|.++++.++ .+....++.++.+.
T Consensus 270 ~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~g~~~~~~~~--l~~~i~~l~~~~~-~~~~~~~~~~~~~~ 346 (363)
T cd04955 270 LFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFNREVLGDKAIYFKVGDD--LASLLEELEADPE-EVSAMAKAARERIR 346 (363)
T ss_pred EEEeCCccCCCCChHHHHHHHcCCCEEEecCCccceeecCCeeEecCchH--HHHHHHHHHhCHH-HHHHHHHHHHHHHH
Confidence 99999999 9882 12222 4577777776666655 56888888776 9999999998763 34444455566554
Q ss_pred -cCCHHHHHHHHHHH
Q 044635 512 -THDVGYWARSFLQD 525 (831)
Q Consensus 512 -~~~~~~W~~~~l~~ 525 (831)
.+++..-++++++-
T Consensus 347 ~~fs~~~~~~~~~~~ 361 (363)
T cd04955 347 EKYTWEKIADQYEEL 361 (363)
T ss_pred HhCCHHHHHHHHHHH
Confidence 47877777776654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.51 E-value=2e-12 Score=146.78 Aligned_cols=186 Identities=12% Similarity=0.081 Sum_probs=125.5
Q ss_pred EEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHH----HHHHHHHHhCCCCCCcE
Q 044635 300 VSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKL----LAMEQLLIQHPEWQGKV 375 (831)
Q Consensus 300 ~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l----~A~~~lL~~~P~~~~~v 375 (831)
.++.++|+|||.+.|.+.... ...+ ..++++|+++||+++.||++.++ .++..+.+++|+++
T Consensus 196 ~~v~vipngvd~~~f~~~~~~----------~~~~-~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~--- 261 (397)
T TIGR03087 196 GRITAFPNGVDADFFSPDRDY----------PNPY-PPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAE--- 261 (397)
T ss_pred CCeEEeecccchhhcCCCccc----------cCCC-CCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcE---
Confidence 367788999999887532110 0112 24567899999999999999887 56667777889876
Q ss_pred EEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCC-ccCCC---CC
Q 044635 376 VLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAV-RDGSE---PS 451 (831)
Q Consensus 376 vLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~-~eGma---~~ 451 (831)
|+++|. ++. .++.++.. . ..|. +.|.++ ++..+|+.||++|+||. .||+. .+
T Consensus 262 -l~ivG~-----g~~-----~~~~~l~~----~------~~V~-~~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lE 317 (397)
T TIGR03087 262 -FYIVGA-----KPS-----PAVRALAA----L------PGVT-VTGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLE 317 (397)
T ss_pred -EEEECC-----CCh-----HHHHHhcc----C------CCeE-EeeecC--CHHHHHHhCCEEEecccccCCcccHHHH
Confidence 888883 222 12333211 0 1244 556776 68999999999999996 58882 23
Q ss_pred CCCCc-eEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHH
Q 044635 452 SPKKS-MLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYV-STHDVGYWARSFLQDL 526 (831)
Q Consensus 452 ~~~~g-~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l 526 (831)
++..| |+|+|.. |+.... ..++++. .|++++|++|.++++. ++.++...++.++++ ..+++...++++.+-+
T Consensus 318 Ama~G~PVV~t~~-~~~~i~~~~~~g~lv~-~~~~~la~ai~~ll~~-~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l 394 (397)
T TIGR03087 318 AMAMAKPVVASPE-AAEGIDALPGAELLVA-ADPADFAAAILALLAN-PAEREELGQAARRRVLQHYHWPRNLARLDALL 394 (397)
T ss_pred HHHcCCCEEecCc-ccccccccCCcceEeC-CCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 33344 5666654 322221 3578885 8999999999999974 445555666777777 5688888888775544
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.7e-12 Score=147.55 Aligned_cols=294 Identities=18% Similarity=0.164 Sum_probs=190.5
Q ss_pred CCEEEEeCccccchHHHHHhh---cCCCeEEEEEec-----cCC-ChHHhhcCCC---h----------HHHHHHHhcCC
Q 044635 202 DDFVWVHDYHLMVLPTFLRKR---FNRVKLGFFLHS-----PFP-SSEIYKTLPI---R----------EEILRALLNSD 259 (831)
Q Consensus 202 ~d~vwvhDyhL~llp~~lr~~---~~~~~i~~flH~-----PfP-~~e~f~~lp~---r----------~eil~~ll~~d 259 (831)
.|+|.+||||..|+|.++++. ...++..|+.|. .|| ...-.-.||. . .-+--|+..+|
T Consensus 131 pDIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad 210 (487)
T COG0297 131 PDIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYAD 210 (487)
T ss_pred CCEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheecc
Confidence 489999999999999999997 778999999993 233 1222223441 1 22334566678
Q ss_pred eEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCC-----------cchHHHHH
Q 044635 260 LIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSL-----------PGTEAKVS 328 (831)
Q Consensus 260 ligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~-----------~~~~~~~~ 328 (831)
.|.--++.|+..-.. ...|. ...-.+.+ +.-++.-+=+|||.....+.... +.-.....
T Consensus 211 ~vttVSptYa~Ei~t---~~~g~-----gl~g~l~~--~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~ 280 (487)
T COG0297 211 AVTTVSPTYAGEIYT---PEYGE-----GLEGLLSW--RSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKV 280 (487)
T ss_pred EEEEECHHHHHhhcc---ccccc-----cchhhhhh--ccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHH
Confidence 888777877765541 00000 00001111 11344455567776554321110 01223345
Q ss_pred HHHHHhc-c--CCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHH
Q 044635 329 ELIKQFH-D--QGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERI 405 (831)
Q Consensus 329 ~lr~~~~-~--~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~I 405 (831)
.++++++ + .+.+++..|+|++..||++.+++|++.++++. ++ ||++|.+ -..++..+..++.++
T Consensus 281 ~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~----~vilG~g-------d~~le~~~~~la~~~ 347 (487)
T COG0297 281 ALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQ----LVLLGTG-------DPELEEALRALASRH 347 (487)
T ss_pred HHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ce----EEEEecC-------cHHHHHHHHHHHHhc
Confidence 6778887 3 25699999999999999999999999999987 55 8888843 146778888888887
Q ss_pred hccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCCC----CCCCCceEEEecccccccccC----------
Q 044635 406 NQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEP----SSPKKSMLVVSEFIGCSPSLS---------- 471 (831)
Q Consensus 406 N~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~----~~~~~g~lVlSe~~G~~~~l~---------- 471 (831)
..++ .+.-..+..-...+|..||++++||..|++++ ...-++++|+.+.+|.++.+.
T Consensus 348 ~~~~---------~~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~ 418 (487)
T COG0297 348 PGRV---------LVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGV 418 (487)
T ss_pred CceE---------EEEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCc
Confidence 6533 22223456667889999999999999998843 123356999999999988762
Q ss_pred -CCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhh--ccCCHHHHHHHHHHHHHH
Q 044635 472 -GAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYV--STHDVGYWARSFLQDLER 528 (831)
Q Consensus 472 -~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v--~~~~~~~W~~~~l~~l~~ 528 (831)
+|+++.|.|+++++.||.+|+..-..... .++.....- ...++..=+.++..-.+.
T Consensus 419 gtGf~f~~~~~~~l~~al~rA~~~y~~~~~-~w~~~~~~~m~~d~sw~~sa~~y~~lY~~ 477 (487)
T COG0297 419 GTGFLFLQTNPDHLANALRRALVLYRAPPL-LWRKVQPNAMGADFSWDLSAKEYVELYKP 477 (487)
T ss_pred eeEEEEecCCHHHHHHHHHHHHHHhhCCHH-HHHHHHHhhcccccCchhHHHHHHHHHHH
Confidence 47888888999999999999875432221 022222222 344455555555444333
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.50 E-value=5.3e-13 Score=131.56 Aligned_cols=200 Identities=20% Similarity=0.217 Sum_probs=123.4
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC--CCceEEecCCEEEEeCCC
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC--ENLGIAAEHGYFFRLRRD 649 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~--~~~~liaenGa~i~~~~~ 649 (831)
..++||+|+||||+++. .+. +.....+.+|.. .|..|++||..+...+..+-..+ ++.++|+|||+.|+.+.+
T Consensus 6 ~~~lIFtDlD~TLl~~~-ye~---~pA~pv~~el~d-~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~p~~ 80 (274)
T COG3769 6 MPLLIFTDLDGTLLPHS-YEW---QPAAPVLLELKD-AGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYLPKG 80 (274)
T ss_pred cceEEEEcccCcccCCC-CCC---CccchHHHHHHH-cCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEeccc
Confidence 46899999999999921 233 334445666654 69999999999999888777665 568999999999998743
Q ss_pred ceEEEcCC---------cCCc-cHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCc-------------cchHHH
Q 044635 650 EEWETCIP---------VADC-GWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPD-------------FGSCQA 706 (831)
Q Consensus 650 ~~w~~~~~---------~~~~-~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~-------------~~~~~a 706 (831)
|..... .... .-.+.+.+.++...+...-.+....+....-.+....++ ...+..
T Consensus 81 --~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rEyseti~~rs~ 158 (274)
T COG3769 81 --WFPFDGKPREISGISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAMLREYSETIIWRSS 158 (274)
T ss_pred --ccccCCCCceecceEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHHHHhhhheeeccc
Confidence 322100 0000 011233333333322211111111000000000000000 001112
Q ss_pred HHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 707 KELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 707 ~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
++...++...+...++.++.|..+.-|......||.|++++++.+...+- ..-++++||+.||.+||+.+..
T Consensus 159 d~~~~~~~~~L~e~glt~v~garf~~v~~as~gKg~Aa~~ll~~y~rl~~-~r~t~~~GDg~nD~Pl~ev~d~ 230 (274)
T COG3769 159 DERMAQFTARLNERGLTFVHGARFWHVLDASAGKGQAANWLLETYRRLGG-ARTTLGLGDGPNDAPLLEVMDY 230 (274)
T ss_pred chHHHHHHHHHHhcCceEEeccceEEEeccccCccHHHHHHHHHHHhcCc-eeEEEecCCCCCcccHHHhhhh
Confidence 23445566667667788999999998999999999999999998754332 2259999999999999999975
|
|
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.2e-12 Score=143.52 Aligned_cols=241 Identities=15% Similarity=0.110 Sum_probs=152.1
Q ss_pred CCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCC----ChH-HhhcCCC-------------hHHHHHHHhcCCeEee
Q 044635 202 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFP----SSE-IYKTLPI-------------REEILRALLNSDLIGF 263 (831)
Q Consensus 202 ~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP----~~e-~f~~lp~-------------r~eil~~ll~~dligf 263 (831)
.|+|.++.. .+....+ ..++.+..+++|.|.+ ..+ .....+. +....+.+-.+|.|..
T Consensus 84 ~D~v~~~~~--~~~~~~~--~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~ 159 (351)
T cd03804 84 YDLVISSSH--AVAKGVI--TRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYFIA 159 (351)
T ss_pred CCEEEEcCc--HHhcccc--CCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 488877643 2222222 4457788888898631 111 1111111 0111233457788888
Q ss_pred cCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEE
Q 044635 264 HTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLL 343 (831)
Q Consensus 264 ~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil 343 (831)
.+....+.+... . +. ...++|+|+|.+.|.... ..+++++
T Consensus 160 ~S~~~~~~~~~~----~----------------~~--~~~vi~~~~d~~~~~~~~------------------~~~~~il 199 (351)
T cd03804 160 NSRFVARRIKKY----Y----------------GR--DATVIYPPVDTDRFTPAE------------------EKEDYYL 199 (351)
T ss_pred CCHHHHHHHHHH----h----------------CC--CcEEECCCCCHhhcCcCC------------------CCCCEEE
Confidence 777666555431 1 11 224678999987764210 2345789
Q ss_pred eccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCC
Q 044635 344 GVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEP 423 (831)
Q Consensus 344 ~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~ 423 (831)
++||+.+.||++.+++|++++ | ++ |+++|. ++..+++++ . .. ..|. +.|.
T Consensus 200 ~~G~~~~~K~~~~li~a~~~~----~-~~----l~ivG~-----g~~~~~l~~-------~------~~--~~V~-~~g~ 249 (351)
T cd03804 200 SVGRLVPYKRIDLAIEAFNKL----G-KR----LVVIGD-----GPELDRLRA-------K------AG--PNVT-FLGR 249 (351)
T ss_pred EEEcCccccChHHHHHHHHHC----C-Cc----EEEEEC-----ChhHHHHHh-------h------cC--CCEE-EecC
Confidence 999999999999999999875 4 44 888883 343333332 1 01 1354 5678
Q ss_pred CCHHHHHHHHHHcCEeEECCCccCCCC---CCCC-CceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCH
Q 044635 424 LKFYERIAYYVVAECCLVTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMAD 496 (831)
Q Consensus 424 v~~~el~aly~~ADv~vvtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~ 496 (831)
++.+++.++|+.||++++||. ||++. +++. +.|+|++..+|..+.+ .+|++++|.|++++|++|..+++.+.
T Consensus 250 ~~~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~~~la~~i~~l~~~~~ 328 (351)
T cd03804 250 VSDEELRDLYARARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQTVESLAAAVERFEKNED 328 (351)
T ss_pred CCHHHHHHHHHhCCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCCCHHHHHHHHHHHHhCcc
Confidence 999999999999999999999 98832 2222 4577788877766666 35899999999999999999998774
Q ss_pred HHHHHHHHHHhhhhccCCHHHHHHH
Q 044635 497 QEKQLRHEKHYRYVSTHDVGYWARS 521 (831)
Q Consensus 497 ~er~~r~~~~~~~v~~~~~~~W~~~ 521 (831)
.. .+.+++...++++....++
T Consensus 329 ~~----~~~~~~~~~~~~~~~~~~~ 349 (351)
T cd03804 329 FD----PQAIRAHAERFSESRFREK 349 (351)
T ss_pred cC----HHHHHHHHHhcCHHHHHHH
Confidence 11 2233444455555555443
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.47 E-value=4.2e-12 Score=140.87 Aligned_cols=192 Identities=15% Similarity=0.131 Sum_probs=132.3
Q ss_pred EEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCccc--ccCHHHHHHHHHHHHHh-CCCCCCcE
Q 044635 300 VSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDI--FKGISLKLLAMEQLLIQ-HPEWQGKV 375 (831)
Q Consensus 300 ~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~--~KGi~~~l~A~~~lL~~-~P~~~~~v 375 (831)
.++.++|+|||...+.+.. ....++.++ +.++.+++.+++... .||+..+++|++.+.++ .|+ +
T Consensus 159 ~~~~vi~ngi~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~----~ 226 (365)
T cd03825 159 IPIEVIPNGIDTTIFRPRD--------KREARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDD----I 226 (365)
T ss_pred CceEEeCCCCcccccCCCc--------HHHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCC----e
Confidence 3678899999988764211 123455555 456677777777654 89999999999988665 344 5
Q ss_pred EEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCC-HHHHHHHHHHcCEeEECCCccCCCC---C
Q 044635 376 VLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLK-FYERIAYYVVAECCLVTAVRDGSEP---S 451 (831)
Q Consensus 376 vLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~-~~el~aly~~ADv~vvtS~~eGma~---~ 451 (831)
.++++|... .... . . ....+.+.+.++ .+++..+|+.||++++||..||++. +
T Consensus 227 ~~~i~G~~~-----~~~~--~-------~---------~~~~v~~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~E 283 (365)
T cd03825 227 ELVVFGASD-----PEIP--P-------D---------LPFPVHYLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIE 283 (365)
T ss_pred EEEEeCCCc-----hhhh--c-------c---------CCCceEecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHH
Confidence 588888432 1000 0 0 112234566777 8899999999999999999999832 2
Q ss_pred CCC-CceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHH
Q 044635 452 SPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYV-STHDVGYWARSFLQDL 526 (831)
Q Consensus 452 ~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l 526 (831)
+.. +.|+|++...|..+.+ ..|+++++.|++++|++|.++++.+ +++....++.++++ ..+++...++++++-+
T Consensus 284 am~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y 362 (365)
T cd03825 284 ALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADP-DEREELGEAARELAENEFDSRVQAKRYLSLY 362 (365)
T ss_pred HHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 222 4577777776666666 2589999999999999999999744 34444455566665 4678888888777654
Q ss_pred H
Q 044635 527 E 527 (831)
Q Consensus 527 ~ 527 (831)
+
T Consensus 363 ~ 363 (365)
T cd03825 363 E 363 (365)
T ss_pred h
Confidence 4
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.45 E-value=7.6e-12 Score=137.38 Aligned_cols=236 Identities=14% Similarity=0.035 Sum_probs=149.0
Q ss_pred CCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhC
Q 044635 202 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLG 281 (831)
Q Consensus 202 ~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~ 281 (831)
-|+|.+|+....++ + .+..+.|+.+.+|..++.... .........+.+-+-+....+.+.
T Consensus 88 ~Divh~~~~~~~~~---~-~~~~~~~~v~~~h~~~~~~~~--------~~~~~~~~~~~~~~~s~~~~~~~~-------- 147 (335)
T cd03802 88 FDIVHNHSLHLPLP---F-ARPLPVPVVTTLHGPPDPELL--------KLYYAARPDVPFVSISDAQRRPWP-------- 147 (335)
T ss_pred CCEEEecCcccchh---h-hcccCCCEEEEecCCCCcccc--------hHHHhhCcCCeEEEecHHHHhhcc--------
Confidence 38999999888776 2 334578899999987653211 123333444444333322221110
Q ss_pred CeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHH
Q 044635 282 LTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAM 361 (831)
Q Consensus 282 ~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~ 361 (831)
.. .++.++|+|+|.+.|.. .. .++.+++++||+.+.||+..+++|+
T Consensus 148 ---------------~~-~~~~vi~ngvd~~~~~~----------------~~--~~~~~i~~~Gr~~~~Kg~~~li~~~ 193 (335)
T cd03802 148 ---------------PL-PWVATVHNGIDLDDYPF----------------RG--PKGDYLLFLGRISPEKGPHLAIRAA 193 (335)
T ss_pred ---------------cc-cccEEecCCcChhhCCC----------------CC--CCCCEEEEEEeeccccCHHHHHHHH
Confidence 00 46778999999987742 01 4567899999999999999999987
Q ss_pred HHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEE
Q 044635 362 EQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLV 441 (831)
Q Consensus 362 ~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vv 441 (831)
.+ ++++ |+++|.. +....+...+.+... ..+-+.+.|.++.+++..+|+.||++++
T Consensus 194 ~~-----~~~~----l~i~G~~-----~~~~~~~~~~~~~~~----------~~~~v~~~G~~~~~~~~~~~~~~d~~v~ 249 (335)
T cd03802 194 RR-----AGIP----LKLAGPV-----SDPDYFYREIAPELL----------DGPDIEYLGEVGGAEKAELLGNARALLF 249 (335)
T ss_pred Hh-----cCCe----EEEEeCC-----CCHHHHHHHHHHhcc----------cCCcEEEeCCCCHHHHHHHHHhCcEEEe
Confidence 54 3444 8888843 222222222222210 0123445678999999999999999999
Q ss_pred CCC-ccCCC---CCCCC-CceEEEecccccccccC---CCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhh-hcc
Q 044635 442 TAV-RDGSE---PSSPK-KSMLVVSEFIGCSPSLS---GAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRY-VST 512 (831)
Q Consensus 442 tS~-~eGma---~~~~~-~g~lVlSe~~G~~~~l~---~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~-v~~ 512 (831)
||. .||+. .+++. +.|+|+|...|..+.+. +|+++++ +++++++|.+++..+.+. .++. ..+
T Consensus 250 ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~~~~~-------~~~~~~~~ 320 (335)
T cd03802 250 PILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRLDRAA-------CRRRAERR 320 (335)
T ss_pred CCcccCCcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhccHHHH-------HHHHHHHh
Confidence 997 58872 12333 44777777777766662 5889987 999999999987654321 1122 255
Q ss_pred CCHHHHHHHHHH
Q 044635 513 HDVGYWARSFLQ 524 (831)
Q Consensus 513 ~~~~~W~~~~l~ 524 (831)
+++..-++++++
T Consensus 321 ~s~~~~~~~~~~ 332 (335)
T cd03802 321 FSAARMVDDYLA 332 (335)
T ss_pred CCHHHHHHHHHH
Confidence 666665555544
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.45 E-value=8.9e-12 Score=140.17 Aligned_cols=232 Identities=9% Similarity=-0.058 Sum_probs=143.6
Q ss_pred CEEEEeCccccc--hHHHHHhhcCCCeEEEEEeccCCChHHhhc--C--CC----hHHHHHHH-hcCCeEeecCHHhHHH
Q 044635 203 DFVWVHDYHLMV--LPTFLRKRFNRVKLGFFLHSPFPSSEIYKT--L--PI----REEILRAL-LNSDLIGFHTFDYARH 271 (831)
Q Consensus 203 d~vwvhDyhL~l--lp~~lr~~~~~~~i~~flH~PfP~~e~f~~--l--p~----r~eil~~l-l~~dligf~t~~~~~~ 271 (831)
|+|++|..+.+. ++..+-.+..++|+.+.+|.-+.+ .+.. . +. ...+.+.+ -.+|.|-..+....+.
T Consensus 102 DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S~~~~~~ 179 (371)
T PLN02275 102 DVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYT--LLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTKAMQHE 179 (371)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHH--HHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECCHHHHHH
Confidence 899999877533 233333444568899999965321 1110 0 00 01111121 2367777777655554
Q ss_pred HHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccc
Q 044635 272 FLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIF 351 (831)
Q Consensus 272 Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~ 351 (831)
..+. .|.. +.++|+|+ .+.|.+... . ..+......+++++||+.+.
T Consensus 180 l~~~--------------------~g~~--i~vi~n~~-~~~f~~~~~-----~------~~~~~~~~~~i~~~grl~~~ 225 (371)
T PLN02275 180 LDQN--------------------WGIR--ATVLYDQP-PEFFRPASL-----E------IRLRPNRPALVVSSTSWTPD 225 (371)
T ss_pred HHHh--------------------cCCC--eEEECCCC-HHHcCcCCc-----h------hcccCCCcEEEEEeCceecc
Confidence 4320 0111 56788884 455542211 0 11111345688899999999
Q ss_pred cCHHHHHHHHHHHHH-----------------hCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCC
Q 044635 352 KGISLKLLAMEQLLI-----------------QHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGY 414 (831)
Q Consensus 352 KGi~~~l~A~~~lL~-----------------~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~ 414 (831)
||+..+++|+..+.. ++|+ +.|+++| +|+..+++++++.++ +.
T Consensus 226 k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~----i~l~ivG-----~G~~~~~l~~~~~~~-----------~l 285 (371)
T PLN02275 226 EDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPR----LLFIITG-----KGPQKAMYEEKISRL-----------NL 285 (371)
T ss_pred CCHHHHHHHHHHHHhhhhhccccccccccccccCCC----eEEEEEe-----CCCCHHHHHHHHHHc-----------CC
Confidence 999999999988742 3454 5599998 555555555544442 33
Q ss_pred ccEEEecCCCCHHHHHHHHHHcCEeEECC---CccCCC---CCCCC-CceEEEeccccccccc---CCCceeCCCCHHHH
Q 044635 415 DPVVLIDEPLKFYERIAYYVVAECCLVTA---VRDGSE---PSSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNIDAV 484 (831)
Q Consensus 415 ~pv~~~~~~v~~~el~aly~~ADv~vvtS---~~eGma---~~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~~~~ 484 (831)
..++++.+.++.+++..+|+.||+||+++ ..|||. .+++. +.|+|+|...|..+.+ .+|++|+ |++++
T Consensus 286 ~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~l 363 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGKNGLLFS--SSSEL 363 (371)
T ss_pred CceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccCCCCeEEEC--CHHHH
Confidence 45777777789999999999999999753 236661 12222 4577777776766666 3588986 69999
Q ss_pred HHHHHHHh
Q 044635 485 SDAMDSAL 492 (831)
Q Consensus 485 A~ai~~aL 492 (831)
|++|.++|
T Consensus 364 a~~i~~l~ 371 (371)
T PLN02275 364 ADQLLELL 371 (371)
T ss_pred HHHHHHhC
Confidence 99998765
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.6e-11 Score=140.59 Aligned_cols=272 Identities=17% Similarity=0.193 Sum_probs=161.5
Q ss_pred HHHHHHHHcCCCCCEEEEeCccccchHHHHHh-hcCCCeEEEEEeccCC-ChHHhhcCCChHHHHHHHh-cCCeEeecCH
Q 044635 190 FADRIMEVINPEDDFVWVHDYHLMVLPTFLRK-RFNRVKLGFFLHSPFP-SSEIYKTLPIREEILRALL-NSDLIGFHTF 266 (831)
Q Consensus 190 fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~-~~~~~~i~~flH~PfP-~~e~f~~lp~r~eil~~ll-~~dligf~t~ 266 (831)
...++++.++| |+|++|++.++ |.++.. +..++|+.+..|.-.+ +...++.+ ..+.+.++ .+|.|..++.
T Consensus 115 ~~~~~l~~~~P--d~v~~~~~~~~--~~~l~~~~~~~ip~vl~~~~~~~~s~~~~~~~---~~~~r~~~~~~d~ii~~S~ 187 (425)
T PRK05749 115 AVRRFLRFWRP--KLVIIMETELW--PNLIAELKRRGIPLVLANARLSERSFKRYQKF---KRFYRLLFKNIDLVLAQSE 187 (425)
T ss_pred HHHHHHHhhCC--CEEEEEecchh--HHHHHHHHHCCCCEEEEeccCChhhHHHHHHH---HHHHHHHHHhCCEEEECCH
Confidence 34445666777 79999988765 555533 3346777776554222 22233222 22333333 3799999998
Q ss_pred HhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEecc
Q 044635 267 DYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVD 346 (831)
Q Consensus 267 ~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~Vd 346 (831)
...+.|.+ +|.. .. +.++|++ +.+.+. .+........++++++ .+++++++++
T Consensus 188 ~~~~~l~~-----~g~~---------------~~-i~vi~n~-~~d~~~----~~~~~~~~~~~r~~~~-~~~~vil~~~ 240 (425)
T PRK05749 188 EDAERFLA-----LGAK---------------NE-VTVTGNL-KFDIEV----PPELAARAATLRRQLA-PNRPVWIAAS 240 (425)
T ss_pred HHHHHHHH-----cCCC---------------CC-cEecccc-cccCCC----ChhhHHHHHHHHHHhc-CCCcEEEEeC
Confidence 88877754 2321 11 3344542 221111 1111123456677774 5678889998
Q ss_pred CcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcc---CCCCCC----ccEEE
Q 044635 347 DMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQT---FGKPGY----DPVVL 419 (831)
Q Consensus 347 Rld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~---~g~~~~----~pv~~ 419 (831)
+. .|+...+++||.++++++|+++ |+++| ++++. .+++.+++++.+-. +.. +. ...++
T Consensus 241 ~~--~~~~~~ll~A~~~l~~~~~~~~----liivG-----~g~~r---~~~l~~~~~~~gl~~~~~~~-~~~~~~~~~v~ 305 (425)
T PRK05749 241 TH--EGEEELVLDAHRALLKQFPNLL----LILVP-----RHPER---FKEVEELLKKAGLSYVRRSQ-GEPPSADTDVL 305 (425)
T ss_pred CC--chHHHHHHHHHHHHHHhCCCcE----EEEcC-----CChhh---HHHHHHHHHhCCCcEEEccC-CCCCCCCCcEE
Confidence 75 6889999999999998899876 88777 34442 12344444432211 100 00 01233
Q ss_pred ecCCCCHHHHHHHHHHcCEeEE-CCCccCCC---CCCCC-CceEEEecccccccc----c-CCCceeCCCCHHHHHHHHH
Q 044635 420 IDEPLKFYERIAYYVVAECCLV-TAVRDGSE---PSSPK-KSMLVVSEFIGCSPS----L-SGAIRVNPWNIDAVSDAMD 489 (831)
Q Consensus 420 ~~~~v~~~el~aly~~ADv~vv-tS~~eGma---~~~~~-~g~lVlSe~~G~~~~----l-~~allVnP~d~~~~A~ai~ 489 (831)
+.+ +..|+..+|+.||++++ +|+.||+. .+++. +.|+|.+...|...+ + .+|.++.|.|++++|++|.
T Consensus 306 l~~--~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~~~d~~~La~~l~ 383 (425)
T PRK05749 306 LGD--TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQVEDAEDLAKAVT 383 (425)
T ss_pred EEe--cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEEECCHHHHHHHHH
Confidence 332 36799999999999666 67778662 13333 346666654443322 2 4678888999999999999
Q ss_pred HHhcCCHHHHHHHHHHHhhhhccC
Q 044635 490 SALEMADQEKQLRHEKHYRYVSTH 513 (831)
Q Consensus 490 ~aL~m~~~er~~r~~~~~~~v~~~ 513 (831)
++++. ++.+....++.++++.++
T Consensus 384 ~ll~~-~~~~~~m~~~a~~~~~~~ 406 (425)
T PRK05749 384 YLLTD-PDARQAYGEAGVAFLKQN 406 (425)
T ss_pred HHhcC-HHHHHHHHHHHHHHHHhC
Confidence 99974 455555666777777665
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.9e-12 Score=128.68 Aligned_cols=147 Identities=18% Similarity=0.289 Sum_probs=105.8
Q ss_pred HHHHHhc-cCCcEEEEeccCcccccCHHHHHHHHHHHHHh-CCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHh
Q 044635 329 ELIKQFH-DQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQ-HPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERIN 406 (831)
Q Consensus 329 ~lr~~~~-~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~-~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN 406 (831)
.++.+.+ ..++++|+++||+++.||+..+++|+..+.++ .|++. |+++| .++.. ..+..++...+
T Consensus 4 ~~~~~~~~~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~----l~i~G-----~~~~~----~~~~~~~~~~~ 70 (172)
T PF00534_consen 4 KLREKLKIPDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYK----LVIVG-----DGEYK----KELKNLIEKLN 70 (172)
T ss_dssp HHHHHTTT-TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEE----EEEES-----HCCHH----HHHHHHHHHTT
T ss_pred HHHHHcCCCCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeE----EEEEc-----ccccc----ccccccccccc
Confidence 4455555 57899999999999999999999999999875 66654 88887 22222 33333433322
Q ss_pred ccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCCC---CC-CCCceEEEeccccccccc---CCCceeCCC
Q 044635 407 QTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEP---SS-PKKSMLVVSEFIGCSPSL---SGAIRVNPW 479 (831)
Q Consensus 407 ~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~---~~-~~~g~lVlSe~~G~~~~l---~~allVnP~ 479 (831)
. .. .+.++ +.++.+++.++|+.||++|.||..||++. ++ ..+.|+|+|...|..+.+ .+|++++|.
T Consensus 71 ~----~~--~i~~~-~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~ 143 (172)
T PF00534_consen 71 L----KE--NIIFL-GYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPN 143 (172)
T ss_dssp C----GT--TEEEE-ESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTT
T ss_pred c----cc--ccccc-ccccccccccccccceeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCC
Confidence 1 11 35554 46779999999999999999999999821 11 125688888866666666 346899999
Q ss_pred CHHHHHHHHHHHhcCC
Q 044635 480 NIDAVSDAMDSALEMA 495 (831)
Q Consensus 480 d~~~~A~ai~~aL~m~ 495 (831)
|+++++++|.+++.++
T Consensus 144 ~~~~l~~~i~~~l~~~ 159 (172)
T PF00534_consen 144 DIEELADAIEKLLNDP 159 (172)
T ss_dssp SHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCH
Confidence 9999999999999865
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.2e-10 Score=127.63 Aligned_cols=263 Identities=12% Similarity=0.081 Sum_probs=151.7
Q ss_pred cCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCCh-HHHHHHHhcCCeEeecCHHhHHHHHHHH
Q 044635 198 INPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIR-EEILRALLNSDLIGFHTFDYARHFLSCC 276 (831)
Q Consensus 198 ~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r-~eil~~ll~~dligf~t~~~~~~Fl~~~ 276 (831)
.+.++.++|.+.--...+... .+..++.|-+|=-|+..... -+.. ...-..+-.||+|-..+....+.+..
T Consensus 99 ~~~~~~i~~~~~P~~~~~~~~----~~~~~~Vyd~~D~~~~~~~~--~~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~-- 170 (373)
T cd04950 99 LGFGRPILWYYTPYTLPVAAL----LQASLVVYDCVDDLSAFPGG--PPELLEAERRLLKRADLVFTTSPSLYEAKRR-- 170 (373)
T ss_pred cCCCCcEEEEeCccHHHHHhh----cCCCeEEEEcccchhccCCC--CHHHHHHHHHHHHhCCEEEECCHHHHHHHhh--
Confidence 344457888874333332222 45667777766444322110 0100 11223344589888777655543221
Q ss_pred HHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHH
Q 044635 277 SRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISL 356 (831)
Q Consensus 277 ~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~ 356 (831)
+ + .++.++|+|+|.+.|......+.. .+... ..++++|+++|++++.+++.
T Consensus 171 ------------------~-~--~~i~~i~ngvd~~~f~~~~~~~~~------~~~~~-~~~~~~i~y~G~l~~~~d~~- 221 (373)
T cd04950 171 ------------------L-N--PNVVLVPNGVDYEHFAAARDPPPP------PADLA-ALPRPVIGYYGAIAEWLDLE- 221 (373)
T ss_pred ------------------C-C--CCEEEcccccCHHHhhcccccCCC------hhHHh-cCCCCEEEEEeccccccCHH-
Confidence 1 1 356789999999999643221110 11111 25678999999999976664
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHc
Q 044635 357 KLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVA 436 (831)
Q Consensus 357 ~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~A 436 (831)
+|.+ +.+.+|+++ |++||... ...+. ..+ . ....|+ +.|.++.+++.++|+.|
T Consensus 222 ll~~---la~~~p~~~----~vliG~~~-----~~~~~----~~~----~------~~~nV~-~~G~~~~~~l~~~l~~~ 274 (373)
T cd04950 222 LLEA---LAKARPDWS----FVLIGPVD-----VSIDP----SAL----L------RLPNVH-YLGPKPYKELPAYLAGF 274 (373)
T ss_pred HHHH---HHHHCCCCE----EEEECCCc-----CccCh----hHh----c------cCCCEE-EeCCCCHHHHHHHHHhC
Confidence 3433 345678876 88888431 10010 111 0 112355 46789999999999999
Q ss_pred CEeEECCCccCC-----C---CCCCC-CceEEEecccccccccCCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHh
Q 044635 437 ECCLVTAVRDGS-----E---PSSPK-KSMLVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHY 507 (831)
Q Consensus 437 Dv~vvtS~~eGm-----a---~~~~~-~g~lVlSe~~G~~~~l~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~ 507 (831)
|++++|+..+.. . .+... +.|+|.|...++. ...++..+.+.|+++++++|.++|..+..++..+. .
T Consensus 275 Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~~-~~~~~~~~~~~d~~~~~~ai~~~l~~~~~~~~~~~---~ 350 (373)
T cd04950 275 DVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEVR-RYEDEVVLIADDPEEFVAAIEKALLEDGPARERRR---L 350 (373)
T ss_pred CEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHHH-hhcCcEEEeCCCHHHHHHHHHHHHhcCCchHHHHH---H
Confidence 999999864321 0 01222 4456655543332 23344555567999999999998865544433322 2
Q ss_pred hhhccCCHHHHHHHHHHHHHH
Q 044635 508 RYVSTHDVGYWARSFLQDLER 528 (831)
Q Consensus 508 ~~v~~~~~~~W~~~~l~~l~~ 528 (831)
+.+.+|++..=++.+++.|..
T Consensus 351 ~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 351 RLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HHHHHCCHHHHHHHHHHHHHh
Confidence 267889988888888765543
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.3e-09 Score=123.16 Aligned_cols=188 Identities=14% Similarity=0.120 Sum_probs=120.4
Q ss_pred EEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccccCHHHHHHHHHHHHHh----CCCCCCcE
Q 044635 301 SIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQ----HPEWQGKV 375 (831)
Q Consensus 301 ~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~----~P~~~~~v 375 (831)
+|.+++++|+...+... ....+++++++ ++++++|+.+||....||+...++++..++.. .|+.+
T Consensus 174 ki~v~g~~v~~~f~~~~-------~~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~--- 243 (382)
T PLN02605 174 QIRVYGLPIRPSFARAV-------RPKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQ--- 243 (382)
T ss_pred HEEEECcccCHhhccCC-------CCHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCce---
Confidence 45667888886433211 11345778888 67889999999999999999999999876521 34332
Q ss_pred EEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCC----ccCCCCC
Q 044635 376 VLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAV----RDGSEPS 451 (831)
Q Consensus 376 vLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~----~eGma~~ 451 (831)
.++++| +++ ++++++.+... + ..|. +.|.++ ++..||++||++|.+|- .|.|++
T Consensus 244 ~~vi~G-----~~~---~~~~~L~~~~~------~----~~v~-~~G~~~--~~~~l~~aaDv~V~~~g~~ti~EAma~- 301 (382)
T PLN02605 244 VVVICG-----RNK---KLQSKLESRDW------K----IPVK-VRGFVT--NMEEWMGACDCIITKAGPGTIAEALIR- 301 (382)
T ss_pred EEEEEC-----CCH---HHHHHHHhhcc------c----CCeE-EEeccc--cHHHHHHhCCEEEECCCcchHHHHHHc-
Confidence 234444 222 23333433210 1 1344 455654 79999999999998652 344455
Q ss_pred CCCCceEEEecc-----ccccccc-CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHH
Q 044635 452 SPKKSMLVVSEF-----IGCSPSL-SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFL 523 (831)
Q Consensus 452 ~~~~g~lVlSe~-----~G~~~~l-~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l 523 (831)
+.|+|++.. .|.++.+ .++.-+.+.|+++++++|.++|..++++++...+..++....+....-++.++
T Consensus 302 ---g~PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~ 376 (382)
T PLN02605 302 ---GLPIILNGYIPGQEEGNVPYVVDNGFGAFSESPKEIARIVAEWFGDKSDELEAMSENALKLARPEAVFDIVHDLH 376 (382)
T ss_pred ---CCCEEEecCCCccchhhHHHHHhCCceeecCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCchHHHHHHHHH
Confidence 568888875 2434444 34444456899999999999998745555555566777777776665555444
|
|
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.22 E-value=5.9e-11 Score=125.50 Aligned_cols=185 Identities=16% Similarity=0.150 Sum_probs=134.3
Q ss_pred HHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCH
Q 044635 275 CCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGI 354 (831)
Q Consensus 275 ~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi 354 (831)
-.+|.+++++.++.+. .+.-.-...++.++|+.++...|.+.... +. ..+...|+.++||-|.||+
T Consensus 145 ~id~~IcVshtskent-vlr~~L~p~kvsvIPnAv~~~~f~P~~~~------------~~-S~~i~~ivv~sRLvyrKGi 210 (426)
T KOG1111|consen 145 NIDRIICVSHTSKENT-VLRGALAPAKVSVIPNAVVTHTFTPDAAD------------KP-SADIITIVVASRLVYRKGI 210 (426)
T ss_pred CCCcEEEEeecCCCce-EEEeccCHhHeeeccceeeccccccCccc------------cC-CCCeeEEEEEeeeeeccch
Confidence 4566677788776653 23333344589999999999998753221 22 2455899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHH
Q 044635 355 SLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYV 434 (831)
Q Consensus 355 ~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~ 434 (831)
++++..+.++.++||+.+ ++++| +||....+++-+++. + -..+|++ .|.++++++-..|.
T Consensus 211 Dll~~iIp~vc~~~p~vr----fii~G-----DGPk~i~lee~lEk~----~------l~~rV~~-lG~v~h~~Vr~vl~ 270 (426)
T KOG1111|consen 211 DLLLEIIPSVCDKHPEVR----FIIIG-----DGPKRIDLEEMLEKL----F------LQDRVVM-LGTVPHDRVRDVLV 270 (426)
T ss_pred HHHHHHHHHHHhcCCCee----EEEec-----CCcccchHHHHHHHh----h------ccCceEE-ecccchHHHHHHHh
Confidence 999999999999999987 88888 666544555544443 1 1225554 56899999999999
Q ss_pred HcCEeEECCCccCCC---CCCCCCceEEEeccccccccc-CCC-ceeCCCCHHHHHHHHHHHhc
Q 044635 435 VAECCLVTAVRDGSE---PSSPKKSMLVVSEFIGCSPSL-SGA-IRVNPWNIDAVSDAMDSALE 493 (831)
Q Consensus 435 ~ADv~vvtS~~eGma---~~~~~~g~lVlSe~~G~~~~l-~~a-llVnP~d~~~~A~ai~~aL~ 493 (831)
..|||+-||+.|.|. .++..+|-.|+|..+|.-+++ ... +..-+-.++++++++.+|++
T Consensus 271 ~G~IFlntSlTEafc~~ivEAaScGL~VVsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~ai~ 334 (426)
T KOG1111|consen 271 RGDIFLNTSLTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEKAIT 334 (426)
T ss_pred cCcEEeccHHHHHHHHHHHHHHhCCCEEEEeecCCccccCCccceeccCCChHHHHHHHHHHHH
Confidence 999999999999771 133446877777776665554 444 43555578888888888876
|
|
| >PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5 | Back alignment and domain information |
|---|
Probab=99.01 E-value=5.9e-09 Score=105.16 Aligned_cols=193 Identities=17% Similarity=0.236 Sum_probs=130.6
Q ss_pred HHHHHHHHhhcCCCeEEEECCCCHhhHHHHhC-C-C--CCceEEecCCEEEEeCCCceEEEcCCc-C-CccHHHHHHHHH
Q 044635 598 TIDILNSLCRDKNNMVFLVSAKSRKTLAEWFS-P-C--ENLGIAAEHGYFFRLRRDEEWETCIPV-A-DCGWKQIAEPVM 671 (831)
Q Consensus 598 ~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~-~-~--~~~~liaenGa~i~~~~~~~w~~~~~~-~-~~~w~~~v~~il 671 (831)
+.++|.+|.+ ...|.|+||-....+++.+. . + ...++.++||...+..+...|...+.. . +...++.+.-++
T Consensus 1 M~~~L~~L~~--~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l 78 (220)
T PF03332_consen 1 MAELLQKLRK--KVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCL 78 (220)
T ss_dssp HHHHHHHHHT--TSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHh--cCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHH
Confidence 3578888875 89999999999999988884 3 2 245899999999999888888654421 1 112233344444
Q ss_pred HHHhc----cCCCeeEeeccceEEEee--ccCCC----ccch-----HHHHHHHHHHHhHhcCCCeEEE-EcCeEEEEEe
Q 044635 672 KLYTE----TTDGSTIEDKETALVWSY--EDADP----DFGS-----CQAKELLDHLESVLANEPVTVK-SGQNLVEVKP 735 (831)
Q Consensus 672 ~~~~e----~~~gs~ie~k~~~l~~~~--~~~d~----~~~~-----~~a~el~~~L~~~l~~~~v~v~-~g~~~vEV~p 735 (831)
++..+ ..-|.+||.+...+.+.- ++|.. .|.. ..-+.+.+.|++.+++..+.+. -|...+||.|
T Consensus 79 ~~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~L~~siGGqiSiDvfp 158 (220)
T PF03332_consen 79 RYISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFGLTFSIGGQISIDVFP 158 (220)
T ss_dssp HHHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCSEEEEEETTTEEEEEE
T ss_pred HHHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCceEEecCCceEEcccc
Confidence 44333 234899999999888762 33321 1111 1124577788888888777655 5789999999
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCcccEEEEcC----CchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCCcccceEeCCh
Q 044635 736 QGVNKGLVAKRLLSTMQEREMLPDFVLCVGD----DRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDT 811 (831)
Q Consensus 736 ~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD----~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~s~A~y~l~d~ 811 (831)
+|++|..++++|.+. ..+.++.||| +.||.++|...+. .+.+ |.++
T Consensus 159 ~GwDKty~Lr~l~~~------~~~~I~FfGDkt~pGGNDyei~~~~rt-------------~g~~-----------V~~p 208 (220)
T PF03332_consen 159 KGWDKTYCLRHLEDE------GFDEIHFFGDKTFPGGNDYEIFEDPRT-------------IGHT-----------VTSP 208 (220)
T ss_dssp TT-SGGGGGGGTTTT------T-SEEEEEESS-STTSTTHHHHHSTTS-------------EEEE------------SSH
T ss_pred CCccHHHHHHHHHhc------ccceEEEEehhccCCCCCceeeecCCc-------------cEEE-----------eCCH
Confidence 999999999998653 2689999999 7899999987542 4454 4789
Q ss_pred hHHHHHHHHHH
Q 044635 812 VEIVRLMQGLA 822 (831)
Q Consensus 812 ~eV~~~L~~L~ 822 (831)
++-++.|+.|.
T Consensus 209 ~DT~~~l~~l~ 219 (220)
T PF03332_consen 209 EDTIKQLKELF 219 (220)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999988875
|
4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A. |
| >KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.98 E-value=6.5e-09 Score=101.27 Aligned_cols=199 Identities=19% Similarity=0.213 Sum_probs=139.6
Q ss_pred HHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCC-C--CCceEEecCCEE
Q 044635 567 AYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSP-C--ENLGIAAEHGYF 643 (831)
Q Consensus 567 ~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~-~--~~~~liaenGa~ 643 (831)
++++...-|+++|.||||++ .....++++.+.|++|.+ ...+.++-|-..+.+.+.++. + .-.+..+|||..
T Consensus 5 a~~r~~~~l~lfdvdgtLt~---~r~~~~~e~~~~l~~lr~--~v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl~ 79 (252)
T KOG3189|consen 5 AAARDEETLCLFDVDGTLTP---PRQKVTPEMLEFLQKLRK--KVTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGLV 79 (252)
T ss_pred hhhcCCceEEEEecCCcccc---ccccCCHHHHHHHHHHhh--heEEEEeecHHHHHHHHHhchhHHhhhcccccCCCee
Confidence 45666778999999999999 788999999999999865 899999999999988888854 2 346888999998
Q ss_pred EEeCCCceEEE-cCCcC-CccHHHHHHHHHHHHhc----cCCCeeEeeccceEEEe--eccCCC----cc-----chHHH
Q 044635 644 FRLRRDEEWET-CIPVA-DCGWKQIAEPVMKLYTE----TTDGSTIEDKETALVWS--YEDADP----DF-----GSCQA 706 (831)
Q Consensus 644 i~~~~~~~w~~-~~~~~-~~~w~~~v~~il~~~~e----~~~gs~ie~k~~~l~~~--~~~~d~----~~-----~~~~a 706 (831)
-+..+...-.+ ..... +...++.+.-++.+..+ .-.|.+||.++..+... -|++.. +| .....
T Consensus 80 ~yk~gk~~~~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~EER~eF~e~Dkk~~iR 159 (252)
T KOG3189|consen 80 AYKGGKLLSKQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQEERNEFEELDKKHKIR 159 (252)
T ss_pred EeeCCcchhHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHHHHHHHHHhhhhhhhH
Confidence 77654322111 11111 11223333444444433 23489999887766543 233321 11 12233
Q ss_pred HHHHHHHHhHhcCCCeEEE-EcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcC----CchhHHHHHH
Q 044635 707 KELLDHLESVLANEPVTVK-SGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGD----DRSDEDMFEV 776 (831)
Q Consensus 707 ~el~~~L~~~l~~~~v~v~-~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD----~~NDe~Mf~~ 776 (831)
+.+.+.|++.++++++... -|+-.++|.|.|++|..-++.+-.. ..+.+-.||| +.||.+.|.-
T Consensus 160 ~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d------gf~~IhFFGDkT~~GGNDyEIf~d 228 (252)
T KOG3189|consen 160 EKFVEALREEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD------GFDTIHFFGDKTMPGGNDYEIFAD 228 (252)
T ss_pred HHHHHHHHHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc------CCceEEEeccccCCCCCcceeeeC
Confidence 5677888888888887654 4678899999999999999888653 3588999999 6899888754
|
|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=98.93 E-value=8.9e-08 Score=107.03 Aligned_cols=253 Identities=14% Similarity=0.068 Sum_probs=143.1
Q ss_pred HHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEec--cCCChHHhhcCCCh--HHHHHHHhcCCe
Q 044635 185 SVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHS--PFPSSEIYKTLPIR--EEILRALLNSDL 260 (831)
Q Consensus 185 ~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~--PfP~~e~f~~lp~r--~eil~~ll~~dl 260 (831)
.....+.+.+.+. +| |+|++|.+....++..+..+..++|+..+.|- .|- +..|+. ...+. -.+|.
T Consensus 75 ~~~~~l~~~l~~~-~p--DvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~~-----~~~~~~~~r~~~~--~~ad~ 144 (363)
T cd03786 75 GLLIGLEAVLLEE-KP--DLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSFD-----RGMPDEENRHAID--KLSDL 144 (363)
T ss_pred HHHHHHHHHHHHh-CC--CEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccCC-----CCCCchHHHHHHH--HHhhh
Confidence 3344455555554 66 89999988776676666555557888765441 110 011211 11111 13565
Q ss_pred EeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeeccc-ChHHHHHhhCCcchHHHHHHHHHHhc-cCC
Q 044635 261 IGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGI-HMGQLQSVLSLPGTEAKVSELIKQFH-DQG 338 (831)
Q Consensus 261 igf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GI-d~~~~~~~~~~~~~~~~~~~lr~~~~-~~~ 338 (831)
+-.-+....+++.. .| ....+|.++++++ |...+..... + ....++.++ +.+
T Consensus 145 ~~~~s~~~~~~l~~-----~G---------------~~~~kI~vign~v~d~~~~~~~~~-~-----~~~~~~~~~~~~~ 198 (363)
T cd03786 145 HFAPTEEARRNLLQ-----EG---------------EPPERIFVVGNTMIDALLRLLELA-K-----KELILELLGLLPK 198 (363)
T ss_pred ccCCCHHHHHHHHH-----cC---------------CCcccEEEECchHHHHHHHHHHhh-c-----cchhhhhcccCCC
Confidence 55445444433332 11 1233566777764 5433321111 0 011233444 345
Q ss_pred cEEEEeccCccc---ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCc
Q 044635 339 KVMLLGVDDMDI---FKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYD 415 (831)
Q Consensus 339 ~~iil~VdRld~---~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~ 415 (831)
+.+++.++|+.. .||+..+++|+.++.+. + +.++..+. ++....+++ .+.+.+. . -.
T Consensus 199 ~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~--~----~~vi~~~~-----~~~~~~l~~----~~~~~~~-~----~~ 258 (363)
T cd03786 199 KYILVTLHRVENVDDGEQLEEILEALAELAEE--D----VPVVFPNH-----PRTRPRIRE----AGLEFLG-H----HP 258 (363)
T ss_pred CEEEEEeCCccccCChHHHHHHHHHHHHHHhc--C----CEEEEECC-----CChHHHHHH----HHHhhcc-C----CC
Confidence 668889999875 79999999999987442 2 33554442 222233333 3333221 0 11
Q ss_pred cEEEecCCCCHHHHHHHHHHcCEeEECCCccCCCCCCCC-CceEEEeccccccccc-CCCceeCC-CCHHHHHHHHHHHh
Q 044635 416 PVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEPSSPK-KSMLVVSEFIGCSPSL-SGAIRVNP-WNIDAVSDAMDSAL 492 (831)
Q Consensus 416 pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~~~~~-~g~lVlSe~~G~~~~l-~~allVnP-~d~~~~A~ai~~aL 492 (831)
.|. +.+....+++..+|+.||++|.+|- |+..++.. +.|+|++...+..+++ .+|..+.+ .|+++++++|.++|
T Consensus 259 ~v~-~~~~~~~~~~~~l~~~ad~~v~~Sg--gi~~Ea~~~g~PvI~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~i~~ll 335 (363)
T cd03786 259 NVL-LISPLGYLYFLLLLKNADLVLTDSG--GIQEEASFLGVPVLNLRDRTERPETVESGTNVLVGTDPEAILAAIEKLL 335 (363)
T ss_pred CEE-EECCcCHHHHHHHHHcCcEEEEcCc--cHHhhhhhcCCCEEeeCCCCccchhhheeeEEecCCCHHHHHHHHHHHh
Confidence 344 4446678899999999999999986 66333333 4577777665655555 45544443 37999999999999
Q ss_pred cCCH
Q 044635 493 EMAD 496 (831)
Q Consensus 493 ~m~~ 496 (831)
+.+.
T Consensus 336 ~~~~ 339 (363)
T cd03786 336 SDEF 339 (363)
T ss_pred cCch
Confidence 8653
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=98.92 E-value=9.1e-08 Score=107.35 Aligned_cols=251 Identities=17% Similarity=0.167 Sum_probs=139.9
Q ss_pred HHHHHHHHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHh--cCCeEeecC
Q 044635 188 KIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALL--NSDLIGFHT 265 (831)
Q Consensus 188 ~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll--~~dligf~t 265 (831)
..|++.+ +..+| |+|.+|......+...+-.+..++|++..-+- .-+.+.+. |+.+++.+-+. .||++--.+
T Consensus 76 ~~l~~~l-~~~~p--Div~~~gd~~~~la~a~aa~~~~ipv~h~~~g-~~s~~~~~--~~~~~~~r~~~~~~ad~~~~~s 149 (365)
T TIGR00236 76 EGLEELL-LEEKP--DIVLVQGDTTTTLAGALAAFYLQIPVGHVEAG-LRTGDRYS--PMPEEINRQLTGHIADLHFAPT 149 (365)
T ss_pred HHHHHHH-HHcCC--CEEEEeCCchHHHHHHHHHHHhCCCEEEEeCC-CCcCCCCC--CCccHHHHHHHHHHHHhccCCC
Confidence 4455444 44466 89999955444444444334446777643221 11111111 22233323222 267776677
Q ss_pred HHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEec
Q 044635 266 FDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGV 345 (831)
Q Consensus 266 ~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~V 345 (831)
....+++++ +|. ...+|.++++|+....+..... .....++++++..+..+++..
T Consensus 150 ~~~~~~l~~-----~G~---------------~~~~I~vign~~~d~~~~~~~~-----~~~~~~~~~~~~~~~~vl~~~ 204 (365)
T TIGR00236 150 EQAKDNLLR-----ENV---------------KADSIFVTGNTVIDALLTNVEI-----AYSSPVLSEFGEDKRYILLTL 204 (365)
T ss_pred HHHHHHHHH-----cCC---------------CcccEEEeCChHHHHHHHHHhh-----ccchhHHHhcCCCCCEEEEec
Confidence 766666653 122 2346778888863322221111 012345566642223455555
Q ss_pred cCcc-cccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCC
Q 044635 346 DDMD-IFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPL 424 (831)
Q Consensus 346 dRld-~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v 424 (831)
.|.. ..||+..+++|+.++.+++|+++ ++.++.|. ++ .+.+ +.+..+ . ...|.+ .+++
T Consensus 205 hr~~~~~k~~~~ll~a~~~l~~~~~~~~----~vi~~~~~----~~---~~~~---~~~~~~----~--~~~v~~-~~~~ 263 (365)
T TIGR00236 205 HRRENVGEPLENIFKAIREIVEEFEDVQ----IVYPVHLN----PV---VREP---LHKHLG----D--SKRVHL-IEPL 263 (365)
T ss_pred CchhhhhhHHHHHHHHHHHHHHHCCCCE----EEEECCCC----hH---HHHH---HHHHhC----C--CCCEEE-ECCC
Confidence 5653 45999999999999998888765 66655332 11 1222 222221 1 113544 4578
Q ss_pred CHHHHHHHHHHcCEeEECC---CccCCCCCCCCCceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCC
Q 044635 425 KFYERIAYYVVAECCLVTA---VRDGSEPSSPKKSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMA 495 (831)
Q Consensus 425 ~~~el~aly~~ADv~vvtS---~~eGma~~~~~~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~ 495 (831)
+..++..+|+.||+++.+| ..|.|++ +.|+|.+...|..+++ ..++++ |.|+++++++|.++|+.+
T Consensus 264 ~~~~~~~~l~~ad~vv~~Sg~~~~EA~a~----g~PvI~~~~~~~~~e~~~~g~~~lv-~~d~~~i~~ai~~ll~~~ 335 (365)
T TIGR00236 264 EYLDFLNLAANSHLILTDSGGVQEEAPSL----GKPVLVLRDTTERPETVEAGTNKLV-GTDKENITKAAKRLLTDP 335 (365)
T ss_pred ChHHHHHHHHhCCEEEECChhHHHHHHHc----CCCEEECCCCCCChHHHhcCceEEe-CCCHHHHHHHHHHHHhCh
Confidence 8999999999999999887 1233444 4566665444434333 234566 579999999999999744
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.1e-07 Score=105.00 Aligned_cols=273 Identities=10% Similarity=0.099 Sum_probs=152.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEe
Q 044635 183 YVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIG 262 (831)
Q Consensus 183 Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dlig 262 (831)
+...+..-..++.+..+| |+|..| +....++.+.+....++|+.... +-|-. + ...+.+ .+|.+-
T Consensus 88 ~~~~~~~~l~~~l~~~~p--D~Vi~~-~~~~~~~~~~~~~~~~ip~~~~~-td~~~-------~-~~~~~~---~ad~i~ 152 (380)
T PRK13609 88 YANFGRKRLKLLLQAEKP--DIVINT-FPIIAVPELKKQTGISIPTYNVL-TDFCL-------H-KIWVHR---EVDRYF 152 (380)
T ss_pred HHHHHHHHHHHHHHHhCc--CEEEEc-ChHHHHHHHHHhcCCCCCeEEEe-CCCCC-------C-cccccC---CCCEEE
Confidence 333444445556666677 788874 66777887766666667765322 21210 0 111111 589888
Q ss_pred ecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCc-E
Q 044635 263 FHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGK-V 340 (831)
Q Consensus 263 f~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~-~ 340 (831)
..+....+.+.+ .|.. ..++.++++.++. .|... .. ...++++++ .+++ .
T Consensus 153 ~~s~~~~~~l~~-----~gi~---------------~~ki~v~G~p~~~-~f~~~---~~----~~~~~~~~~l~~~~~~ 204 (380)
T PRK13609 153 VATDHVKKVLVD-----IGVP---------------PEQVVETGIPIRS-SFELK---IN----PDIIYNKYQLCPNKKI 204 (380)
T ss_pred ECCHHHHHHHHH-----cCCC---------------hhHEEEECcccCh-HHcCc---CC----HHHHHHHcCCCCCCcE
Confidence 777654444432 1221 1123333222322 23211 11 124567776 4444 4
Q ss_pred EEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEe
Q 044635 341 MLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLI 420 (831)
Q Consensus 341 iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~ 420 (831)
+++..|++...||+..+++++.+ .|+++ +++++.. ++ .+++++++++++. + ..|+++
T Consensus 205 il~~~G~~~~~k~~~~li~~l~~----~~~~~----~viv~G~---~~----~~~~~l~~~~~~~----~----~~v~~~ 261 (380)
T PRK13609 205 LLIMAGAHGVLGNVKELCQSLMS----VPDLQ----VVVVCGK---NE----ALKQSLEDLQETN----P----DALKVF 261 (380)
T ss_pred EEEEcCCCCCCcCHHHHHHHHhh----CCCcE----EEEEeCC---CH----HHHHHHHHHHhcC----C----CcEEEE
Confidence 66677999999999998888642 35554 7766521 11 2344455544332 1 136554
Q ss_pred cCCCCHHHHHHHHHHcCEeEECC----CccCCCCCCCCCceEEEecccccc-----ccc-CCCceeCCCCHHHHHHHHHH
Q 044635 421 DEPLKFYERIAYYVVAECCLVTA----VRDGSEPSSPKKSMLVVSEFIGCS-----PSL-SGAIRVNPWNIDAVSDAMDS 490 (831)
Q Consensus 421 ~~~v~~~el~aly~~ADv~vvtS----~~eGma~~~~~~g~lVlSe~~G~~-----~~l-~~allVnP~d~~~~A~ai~~ 490 (831)
+.+ +++..+|+.||+++..+ +.|.|++ +.|+|++...+.. ..+ ..|..+.+.|+++++++|.+
T Consensus 262 -g~~--~~~~~l~~~aD~~v~~~gg~t~~EA~a~----g~PvI~~~~~~g~~~~n~~~~~~~G~~~~~~~~~~l~~~i~~ 334 (380)
T PRK13609 262 -GYV--ENIDELFRVTSCMITKPGGITLSEAAAL----GVPVILYKPVPGQEKENAMYFERKGAAVVIRDDEEVFAKTEA 334 (380)
T ss_pred -ech--hhHHHHHHhccEEEeCCCchHHHHHHHh----CCCEEECCCCCCcchHHHHHHHhCCcEEEECCHHHHHHHHHH
Confidence 555 46889999999988533 1233344 4566666533321 122 34555667899999999999
Q ss_pred HhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHH
Q 044635 491 ALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLERT 529 (831)
Q Consensus 491 aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 529 (831)
+++.+ +.+....+..++....++....++.+++.+...
T Consensus 335 ll~~~-~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 335 LLQDD-MKLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred HHCCH-HHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 99854 344444445566667788888888777665543
|
|
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=5.5e-08 Score=108.64 Aligned_cols=252 Identities=14% Similarity=0.056 Sum_probs=147.8
Q ss_pred HHHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHH
Q 044635 193 RIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHF 272 (831)
Q Consensus 193 ~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~F 272 (831)
++.+..+| |+|..|.....+. ..+..+....|+.++.|..+|.. .+.++- -.+|.+-..+++- +
T Consensus 85 ~~ik~~~p--Dvv~~~~~~~~~~-~~~~~~~~~~p~v~~~~~~~~~~--------~~r~~~--~~~d~ii~~~~~~---~ 148 (357)
T PRK00726 85 KILKRFKP--DVVVGFGGYVSGP-GGLAARLLGIPLVIHEQNAVPGL--------ANKLLA--RFAKKVATAFPGA---F 148 (357)
T ss_pred HHHHhcCC--CEEEECCCcchhH-HHHHHHHcCCCEEEEcCCCCccH--------HHHHHH--HHhchheECchhh---h
Confidence 34455555 8999998554443 43445566788887766544421 011111 1244443333210 0
Q ss_pred HHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccc
Q 044635 273 LSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIF 351 (831)
Q Consensus 273 l~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~ 351 (831)
.+ ....++.++|+|+|.+.+.. +. .+++++ +.+.++|+.+|+....
T Consensus 149 --------------------~~--~~~~~i~vi~n~v~~~~~~~----~~-------~~~~~~~~~~~~~i~~~gg~~~~ 195 (357)
T PRK00726 149 --------------------PE--FFKPKAVVTGNPVREEILAL----AA-------PPARLAGREGKPTLLVVGGSQGA 195 (357)
T ss_pred --------------------hc--cCCCCEEEECCCCChHhhcc----cc-------hhhhccCCCCCeEEEEECCcHhH
Confidence 00 12246888999999876532 11 112333 3567889999999999
Q ss_pred cCHHHHH-HHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHH
Q 044635 352 KGISLKL-LAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERI 430 (831)
Q Consensus 352 KGi~~~l-~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~ 430 (831)
|++..++ +|+.++.+. | .+++++|. ++ .+++.+.+. . +.. |. +.+.+ +++.
T Consensus 196 ~~~~~~l~~a~~~~~~~-~-----~~~~~~G~-----g~-~~~~~~~~~---------~---~~~-v~-~~g~~--~~~~ 247 (357)
T PRK00726 196 RVLNEAVPEALALLPEA-L-----QVIHQTGK-----GD-LEEVRAAYA---------A---GIN-AE-VVPFI--DDMA 247 (357)
T ss_pred HHHHHHHHHHHHHhhhC-c-----EEEEEcCC-----Cc-HHHHHHHhh---------c---CCc-EE-EeehH--hhHH
Confidence 9987776 888877432 2 34666663 22 123322221 1 222 44 34444 6899
Q ss_pred HHHHHcCEeEECCC----ccCCCCCCCCCceEEEecccc--------ccccc---CCCceeCCCC--HHHHHHHHHHHhc
Q 044635 431 AYYVVAECCLVTAV----RDGSEPSSPKKSMLVVSEFIG--------CSPSL---SGAIRVNPWN--IDAVSDAMDSALE 493 (831)
Q Consensus 431 aly~~ADv~vvtS~----~eGma~~~~~~g~lVlSe~~G--------~~~~l---~~allVnP~d--~~~~A~ai~~aL~ 493 (831)
.+|+.||+++.+|- .|.|++ +.|+|++...| .++.+ ..|++++|.| +++++++|.+++.
T Consensus 248 ~~~~~~d~~i~~~g~~~~~Ea~~~----g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~ 323 (357)
T PRK00726 248 AAYAAADLVICRAGASTVAELAAA----GLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLS 323 (357)
T ss_pred HHHHhCCEEEECCCHHHHHHHHHh----CCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHc
Confidence 99999999998873 122344 44666654322 12233 4578888888 9999999999998
Q ss_pred CCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHH
Q 044635 494 MADQEKQLRHEKHYRYVSTHDVGYWARSFLQDL 526 (831)
Q Consensus 494 m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 526 (831)
. ++.++...+..+++..+.+...-++.+++.+
T Consensus 324 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 324 D-PERLEAMAEAARALGKPDAAERLADLIEELA 355 (357)
T ss_pred C-HHHHHHHHHHHHhcCCcCHHHHHHHHHHHHh
Confidence 6 4455555555677777777777666665543
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.89 E-value=7.2e-09 Score=101.65 Aligned_cols=70 Identities=21% Similarity=0.236 Sum_probs=56.2
Q ss_pred CHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEeCCh--h
Q 044635 739 NKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLDDT--V 812 (831)
Q Consensus 739 nKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~d~--~ 812 (831)
+|..+++.+++++ |++++.++++||+.||++|++.++.+ +.|.+. +..|+|++.++ +
T Consensus 76 ~k~~~~~~~~~~~---~~~~~~~~~vGDs~~D~~~~~~ag~~--------------~~v~~~~~~~~~~a~~i~~~~~~~ 138 (154)
T TIGR01670 76 NKLIAFSDILEKL---ALAPENVAYIGDDLIDWPVMEKVGLS--------------VAVADAHPLLIPRADYVTRIAGGR 138 (154)
T ss_pred chHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCe--------------EecCCcCHHHHHhCCEEecCCCCC
Confidence 4889999999988 89999999999999999999999853 444432 46788888644 3
Q ss_pred H-HHHHHHHHHhhh
Q 044635 813 E-IVRLMQGLACVA 825 (831)
Q Consensus 813 e-V~~~L~~L~~~~ 825 (831)
+ +.++++.+....
T Consensus 139 g~~~~~~~~~~~~~ 152 (154)
T TIGR01670 139 GAVREVCELLLLAQ 152 (154)
T ss_pred cHHHHHHHHHHHhh
Confidence 3 899999887754
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=6.9e-09 Score=104.83 Aligned_cols=124 Identities=18% Similarity=0.250 Sum_probs=87.6
Q ss_pred cCceeEEecCCCccCCCC----CCCCCCCHHHH---HHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEE
Q 044635 571 TTTRAILLDYDGTLMPQA----SIDKSPNSKTI---DILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYF 643 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~----~~~~~~s~~~~---~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~ 643 (831)
..+|+|++|+||||++.. ........... ..++.|.+ .|..++|+|||+...+..+++.+.-..+
T Consensus 19 ~~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L~~-~Gi~v~I~T~~~~~~v~~~l~~lgl~~~------- 90 (183)
T PRK09484 19 ENIRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCLLT-SGIEVAIITGRKSKLVEDRMTTLGITHL------- 90 (183)
T ss_pred hCceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHHHH-CCCEEEEEeCCCcHHHHHHHHHcCCcee-------
Confidence 469999999999999731 01222333322 67777865 6999999999999888877764310000
Q ss_pred EEeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeE
Q 044635 644 FRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVT 723 (831)
Q Consensus 644 i~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~ 723 (831)
+ .|
T Consensus 91 --------f--------------------------~g------------------------------------------- 93 (183)
T PRK09484 91 --------Y--------------------------QG------------------------------------------- 93 (183)
T ss_pred --------e--------------------------cC-------------------------------------------
Confidence 0 00
Q ss_pred EEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC---
Q 044635 724 VKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK--- 800 (831)
Q Consensus 724 v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~--- 800 (831)
.-+|..+++.+++.+ |++++++++|||+.||++|++.++. ++.|++.
T Consensus 94 -------------~~~k~~~l~~~~~~~---gl~~~ev~~VGDs~~D~~~a~~aG~--------------~~~v~~~~~~ 143 (183)
T PRK09484 94 -------------QSNKLIAFSDLLEKL---AIAPEQVAYIGDDLIDWPVMEKVGL--------------SVAVADAHPL 143 (183)
T ss_pred -------------CCcHHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHHCCC--------------eEecCChhHH
Confidence 012567889999988 9999999999999999999999984 3445654
Q ss_pred -CcccceEeC
Q 044635 801 -PSKAKYYLD 809 (831)
Q Consensus 801 -~s~A~y~l~ 809 (831)
...|+|++.
T Consensus 144 ~~~~a~~v~~ 153 (183)
T PRK09484 144 LLPRADYVTR 153 (183)
T ss_pred HHHhCCEEec
Confidence 346788885
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=98.86 E-value=2e-07 Score=103.61 Aligned_cols=242 Identities=15% Similarity=0.118 Sum_probs=139.7
Q ss_pred HHHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHH
Q 044635 193 RIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHF 272 (831)
Q Consensus 193 ~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~F 272 (831)
++++..+| |+|+.|.... .++..+..+..++|+.++-|..||.. . +.++ ...+|.|...++...+.
T Consensus 83 ~~i~~~~p--DvI~~~~~~~-~~~~~~~a~~~~~p~v~~~~~~~~~~--~------~~~~--~~~~~~vi~~s~~~~~~- 148 (350)
T cd03785 83 KILKKFKP--DVVVGFGGYV-SGPVGLAAKLLGIPLVIHEQNAVPGL--A------NRLL--ARFADRVALSFPETAKY- 148 (350)
T ss_pred HHHHhcCC--CEEEECCCCc-chHHHHHHHHhCCCEEEEcCCCCccH--H------HHHH--HHhhCEEEEcchhhhhc-
Confidence 44555565 8999886544 34444555555778776655555421 0 1111 11256666554422211
Q ss_pred HHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccc
Q 044635 273 LSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIF 351 (831)
Q Consensus 273 l~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~ 351 (831)
+ ...++.++|+|+|.+.+... . . +++++ +.++++|+.+++....
T Consensus 149 ----------------------~--~~~~~~~i~n~v~~~~~~~~-------~---~-~~~~~~~~~~~~i~~~~g~~~~ 193 (350)
T cd03785 149 ----------------------F--PKDKAVVTGNPVREEILALD-------R---E-RARLGLRPGKPTLLVFGGSQGA 193 (350)
T ss_pred ----------------------C--CCCcEEEECCCCchHHhhhh-------h---h-HHhcCCCCCCeEEEEECCcHhH
Confidence 0 12356778999998766421 1 1 45555 5678888889888788
Q ss_pred cCHHHHH-HHHHHHHHhCCCCCCcEEEE-EEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHH
Q 044635 352 KGISLKL-LAMEQLLIQHPEWQGKVVLV-QIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYER 429 (831)
Q Consensus 352 KGi~~~l-~A~~~lL~~~P~~~~~vvLv-qig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el 429 (831)
|+...++ +|+..+. + ++ +.++ ++| .+ +.+++++.+.++ +. .|++ .+.+ +++
T Consensus 194 ~~~~~~l~~a~~~l~-~-~~----~~~~~i~G-----~g-~~~~l~~~~~~~--------~~----~v~~-~g~~--~~~ 246 (350)
T cd03785 194 RAINEAVPEALAELL-R-KR----LQVIHQTG-----KG-DLEEVKKAYEEL--------GV----NYEV-FPFI--DDM 246 (350)
T ss_pred HHHHHHHHHHHHHhh-c-cC----eEEEEEcC-----Cc-cHHHHHHHHhcc--------CC----CeEE-eehh--hhH
Confidence 8877654 7777663 2 22 3333 444 22 233444433221 11 2444 4443 799
Q ss_pred HHHHHHcCEeEECCC----ccCCCCCCCCCceEEEecccc--------ccccc---CCCceeCCC--CHHHHHHHHHHHh
Q 044635 430 IAYYVVAECCLVTAV----RDGSEPSSPKKSMLVVSEFIG--------CSPSL---SGAIRVNPW--NIDAVSDAMDSAL 492 (831)
Q Consensus 430 ~aly~~ADv~vvtS~----~eGma~~~~~~g~lVlSe~~G--------~~~~l---~~allVnP~--d~~~~A~ai~~aL 492 (831)
..+|+.||++|.+|- .|-|++ +.|+|++...| .++.+ ..|++++|. |+++++++|.+++
T Consensus 247 ~~~l~~ad~~v~~sg~~t~~Eam~~----G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll 322 (350)
T cd03785 247 AAAYAAADLVISRAGASTVAELAAL----GLPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELL 322 (350)
T ss_pred HHHHHhcCEEEECCCHhHHHHHHHh----CCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHh
Confidence 999999999998762 122333 44666654432 12333 457889987 8999999999999
Q ss_pred cCCHHHHHHHHHHHhhhhccCCH
Q 044635 493 EMADQEKQLRHEKHYRYVSTHDV 515 (831)
Q Consensus 493 ~m~~~er~~r~~~~~~~v~~~~~ 515 (831)
. +++.++...++.++++..+..
T Consensus 323 ~-~~~~~~~~~~~~~~~~~~~~~ 344 (350)
T cd03785 323 S-DPERLKAMAEAARSLARPDAA 344 (350)
T ss_pred c-CHHHHHHHHHHHHhcCCCCHH
Confidence 6 444555445556666665543
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=4.8e-07 Score=102.60 Aligned_cols=173 Identities=10% Similarity=0.067 Sum_probs=106.6
Q ss_pred HHHHHhc-cCCc-EEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHh
Q 044635 329 ELIKQFH-DQGK-VMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERIN 406 (831)
Q Consensus 329 ~lr~~~~-~~~~-~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN 406 (831)
.++++++ ++++ .++++.||+...||+..+++++ ++..|+++ ++.++. .++ ++.+++.+. .+
T Consensus 191 ~~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~~~---~~~~~~~~----~vvv~G----~~~---~l~~~l~~~---~~ 253 (391)
T PRK13608 191 QWLIDNNLDPDKQTILMSAGAFGVSKGFDTMITDI---LAKSANAQ----VVMICG----KSK---ELKRSLTAK---FK 253 (391)
T ss_pred HHHHHcCCCCCCCEEEEECCCcccchhHHHHHHHH---HhcCCCce----EEEEcC----CCH---HHHHHHHHH---hc
Confidence 4556666 3444 5667899999999999999885 34456554 665652 222 222333322 11
Q ss_pred ccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECC----CccCCCCCCCCCceEEEeccccccccc------CCCcee
Q 044635 407 QTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTA----VRDGSEPSSPKKSMLVVSEFIGCSPSL------SGAIRV 476 (831)
Q Consensus 407 ~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS----~~eGma~~~~~~g~lVlSe~~G~~~~l------~~allV 476 (831)
. . ..|+ +.|.+ +++..+|+.||++|..| +.|.|++ +.|+|++...+..+.- ..|.-+
T Consensus 254 ~----~--~~v~-~~G~~--~~~~~~~~~aDl~I~k~gg~tl~EA~a~----G~PvI~~~~~pgqe~~N~~~~~~~G~g~ 320 (391)
T PRK13608 254 S----N--ENVL-ILGYT--KHMNEWMASSQLMITKPGGITISEGLAR----CIPMIFLNPAPGQELENALYFEEKGFGK 320 (391)
T ss_pred c----C--CCeE-EEecc--chHHHHHHhhhEEEeCCchHHHHHHHHh----CCCEEECCCCCCcchhHHHHHHhCCcEE
Confidence 1 1 1344 44554 57999999999999755 2244444 5577776543322211 222333
Q ss_pred CCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHH
Q 044635 477 NPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRE 532 (831)
Q Consensus 477 nP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~ 532 (831)
-+.|.++++++|.++++.+ +++....++.++....++....++.+++-+...++-
T Consensus 321 ~~~~~~~l~~~i~~ll~~~-~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~~ 375 (391)
T PRK13608 321 IADTPEEAIKIVASLTNGN-EQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQP 375 (391)
T ss_pred EeCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhhh
Confidence 3669999999999999754 445555556677777788888888777766655443
|
|
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.2e-07 Score=103.12 Aligned_cols=176 Identities=12% Similarity=0.072 Sum_probs=108.3
Q ss_pred EEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccccCHHHH-HHHHHHHHHhCCCCCCcEEEEEE
Q 044635 303 KILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIFKGISLK-LLAMEQLLIQHPEWQGKVVLVQI 380 (831)
Q Consensus 303 ~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~KGi~~~-l~A~~~lL~~~P~~~~~vvLvqi 380 (831)
.++|+|+|...+... . . +++++ ++++++|+++||....|++... +.|++++.+. +++ ++.+
T Consensus 153 ~~i~n~v~~~~~~~~----~--~-----~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~----~~~~ 215 (348)
T TIGR01133 153 VLVGNPVRQEIRSLP----V--P-----RERFGLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQ----IVHQ 215 (348)
T ss_pred eEEcCCcCHHHhccc----c--h-----hhhcCCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcE----EEEE
Confidence 578999997655321 0 0 12344 4577889999998888997664 4788777542 222 3334
Q ss_pred ecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCC----ccCCCCCCCCCc
Q 044635 381 ANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAV----RDGSEPSSPKKS 456 (831)
Q Consensus 381 g~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~----~eGma~~~~~~g 456 (831)
+. +++. +++ ++.+.+. +...++.+. .. ++..+|+.||++|.+|- .|.|++ +.
T Consensus 216 ~g----~~~~-~~l----~~~~~~~-------~l~~~v~~~---~~-~~~~~l~~ad~~v~~~g~~~l~Ea~~~----g~ 271 (348)
T TIGR01133 216 TG----KNDL-EKV----KNVYQEL-------GIEAIVTFI---DE-NMAAAYAAADLVISRAGASTVAELAAA----GV 271 (348)
T ss_pred CC----cchH-HHH----HHHHhhC-------CceEEecCc---cc-CHHHHHHhCCEEEECCChhHHHHHHHc----CC
Confidence 31 2221 333 3333321 222344333 22 78999999999998762 123333 45
Q ss_pred eEEEecccccc-------ccc---CCCceeCCCC--HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHH
Q 044635 457 MLVVSEFIGCS-------PSL---SGAIRVNPWN--IDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWAR 520 (831)
Q Consensus 457 ~lVlSe~~G~~-------~~l---~~allVnP~d--~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 520 (831)
|+|++...|.. +.+ ..|++++|.| +++++++|.++++ +++.++...+..++++..+...++++
T Consensus 272 Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~i~~ 346 (348)
T TIGR01133 272 PAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLL-DPANLEAMAEAARKLAKPDAAKRIAE 346 (348)
T ss_pred CEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHc-CHHHHHHHHHHHHhcCCccHHHHHHh
Confidence 77776654422 233 4588898876 9999999999996 44555555666777787776666554
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=98.74 E-value=2.8e-07 Score=94.34 Aligned_cols=107 Identities=14% Similarity=0.109 Sum_probs=70.7
Q ss_pred eccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCC
Q 044635 344 GVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEP 423 (831)
Q Consensus 344 ~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~ 423 (831)
++||+.+.||+..+++|+..+.+++|+++ |+++|... +....+..+.. .+. ...|.++. .
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~----~~i~G~~~-----~~~~~~~~~~~--------~~~--~~~v~~~~-~ 168 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLK----LVIAGDGP-----EREYLEELLAA--------LLL--LDRVIFLG-G 168 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeE----EEEEeCCC-----ChHHHHHHHHh--------cCC--cccEEEeC-C
Confidence 89999999999999999999988888765 88888432 11111111111 111 12455554 4
Q ss_pred C-CHHHHHHHHHHcCEeEECCCccCCCC---CCC-CCceEEEeccccccccc
Q 044635 424 L-KFYERIAYYVVAECCLVTAVRDGSEP---SSP-KKSMLVVSEFIGCSPSL 470 (831)
Q Consensus 424 v-~~~el~aly~~ADv~vvtS~~eGma~---~~~-~~g~lVlSe~~G~~~~l 470 (831)
+ +.+++..+++.||+++.||..||+.. ++. .+.|+|+|...|..+.+
T Consensus 169 ~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i 220 (229)
T cd01635 169 LDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIV 220 (229)
T ss_pred CCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEE
Confidence 5 55666777777999999999998821 122 25577888777665544
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.73 E-value=5.6e-07 Score=96.93 Aligned_cols=193 Identities=18% Similarity=0.222 Sum_probs=127.8
Q ss_pred EEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCC--cEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEE
Q 044635 301 SIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQG--KVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLV 378 (831)
Q Consensus 301 ~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~--~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLv 378 (831)
.+.+.|.|++...+... +... ..+ ..+++++||+++.||+...++|+..+.+..++ +.++
T Consensus 173 ~~~~~~~~~~~~~~~~~-------------~~~~-~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~ 234 (381)
T COG0438 173 KIVVIPNGIDTEKFAPA-------------RIGL-LPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLV 234 (381)
T ss_pred CceEecCCcCHHHcCcc-------------ccCC-CcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEE
Confidence 56788999999877531 0011 122 37999999999999999999999999887766 4477
Q ss_pred EEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCC---CCCC-C
Q 044635 379 QIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSE---PSSP-K 454 (831)
Q Consensus 379 qig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma---~~~~-~ 454 (831)
.+|..... ...+.. ++...+. .+.+.+.+.++.+++..+|+.||+++.||..||++ .++. .
T Consensus 235 ~~g~~~~~----~~~~~~----~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~ 299 (381)
T COG0438 235 IVGDGPER----REELEK----LAKKLGL-------EDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAA 299 (381)
T ss_pred EEcCCCcc----HHHHHH----HHHHhCC-------CCcEEEecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhc
Confidence 77743211 122222 3333221 12333477888889999999999999999888872 1221 2
Q ss_pred CceEEEecccccccccCC---CceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHHH
Q 044635 455 KSMLVVSEFIGCSPSLSG---AIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYV-STHDVGYWARSFLQDLE 527 (831)
Q Consensus 455 ~g~lVlSe~~G~~~~l~~---allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~ 527 (831)
+.|+|++...|..+.+.+ |+++++.|++++++++..++++. +.++...+..++.+ ..+++..-++.+..-+.
T Consensus 300 g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (381)
T COG0438 300 GTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDP-ELREELGEAARERVEEEFSWERIAEQLLELYE 375 (381)
T ss_pred CCcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 357788888777777743 77888888999999999999877 33333333233334 46665555554444443
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=98.71 E-value=4.5e-08 Score=92.29 Aligned_cols=56 Identities=27% Similarity=0.332 Sum_probs=46.5
Q ss_pred eEEecCCCccCCCCCC-----CCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 575 AILLDYDGTLMPQASI-----DKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 575 li~~D~DGTLl~~~~~-----~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
+++||+||||++..+. ...+.+.+.+.|++|++ .|..++|+|||....+..++..+
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~g~~i~ivS~~~~~~~~~~~~~~ 61 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKE-KGIKLALATNKSRREVLELLEEL 61 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHH-CCCeEEEEeCchHHHHHHHHHHc
Confidence 5899999999994321 13778999999999987 48999999999999999988753
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=3.9e-07 Score=99.86 Aligned_cols=65 Identities=17% Similarity=0.188 Sum_probs=53.8
Q ss_pred CCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC---CcccceEeC--Chh
Q 044635 738 VNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK---PSKAKYYLD--DTV 812 (831)
Q Consensus 738 vnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~---~s~A~y~l~--d~~ 812 (831)
..|+.+++.+++++ |++++++++|||+.||++|++.+|. +|++..+ +..|++.++ +.+
T Consensus 247 k~K~~~L~~la~~l---gi~~~qtIaVGDg~NDl~m~~~AGl--------------giA~nAkp~Vk~~Ad~~i~~~~l~ 309 (322)
T PRK11133 247 QYKADTLTRLAQEY---EIPLAQTVAIGDGANDLPMIKAAGL--------------GIAYHAKPKVNEQAQVTIRHADLM 309 (322)
T ss_pred ccHHHHHHHHHHHc---CCChhhEEEEECCHHHHHHHHHCCC--------------eEEeCCCHHHHhhCCEEecCcCHH
Confidence 57999999999998 9999999999999999999999984 5666333 468999986 567
Q ss_pred HHHHHHH
Q 044635 813 EIVRLMQ 819 (831)
Q Consensus 813 eV~~~L~ 819 (831)
+|+.+|.
T Consensus 310 ~~l~~~~ 316 (322)
T PRK11133 310 GVLCILS 316 (322)
T ss_pred HHHHHhc
Confidence 7776664
|
|
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.2e-05 Score=95.14 Aligned_cols=179 Identities=13% Similarity=0.139 Sum_probs=114.2
Q ss_pred CCcEEEEeccCcccccCHHHHHHHHHHHHH--hCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCC
Q 044635 337 QGKVMLLGVDDMDIFKGISLKLLAMEQLLI--QHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGY 414 (831)
Q Consensus 337 ~~~~iil~VdRld~~KGi~~~l~A~~~lL~--~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~ 414 (831)
++..++..|.|+..-||+++++.+++++++ ++|+ ..+.||..|...-.+.. -.++.+.+.+++++ -.|. +
T Consensus 387 pd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~--~pvq~V~~Gka~p~d~~-gk~~i~~i~~la~~--~~~~--~- 458 (601)
T TIGR02094 387 PDVLTIGFARRFATYKRADLIFRDLERLARILNNPE--RPVQIVFAGKAHPADGE-GKEIIQRIVEFSKR--PEFR--G- 458 (601)
T ss_pred CCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCcccch-HHHHHHHHHHHHhc--ccCC--C-
Confidence 456799999999999999999999999985 5565 24778877754322211 13455666666542 0122 1
Q ss_pred ccEEEecCCCCHHHHHHHHHHcCEeEE-CCC-ccCCCC---CCCCCceEEEeccccccccc---CCCceeCC--------
Q 044635 415 DPVVLIDEPLKFYERIAYYVVAECCLV-TAV-RDGSEP---SSPKKSMLVVSEFIGCSPSL---SGAIRVNP-------- 478 (831)
Q Consensus 415 ~pv~~~~~~v~~~el~aly~~ADv~vv-tS~-~eGma~---~~~~~g~lVlSe~~G~~~~l---~~allVnP-------- 478 (831)
.|+++.+ .+-.--..+|.+||+++. ||. .|.-+. -+...|.|.+|-.-|...+. .+|+.+.+
T Consensus 459 -kv~f~~~-Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~~~~nGf~f~~~~~~~~~~ 536 (601)
T TIGR02094 459 -RIVFLEN-YDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGYDGDNGWAIGDGEEYDDEE 536 (601)
T ss_pred -CEEEEcC-CCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccCCCCcEEEECCCccccccc
Confidence 4666654 455555678999999999 665 663211 11235778888877776554 46888885
Q ss_pred ----CCHHHHHHHHHHHhc-----CCH----HHHHHHHH-HHhhhhccCCHHHHHHHHHHH
Q 044635 479 ----WNIDAVSDAMDSALE-----MAD----QEKQLRHE-KHYRYVSTHDVGYWARSFLQD 525 (831)
Q Consensus 479 ----~d~~~~A~ai~~aL~-----m~~----~er~~r~~-~~~~~v~~~~~~~W~~~~l~~ 525 (831)
.|.+++-++|.+++- .+. .+...+++ .|......+++.+-++++++.
T Consensus 537 ~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~ 597 (601)
T TIGR02094 537 EQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDK 597 (601)
T ss_pred cccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHH
Confidence 899999999988772 111 12223332 233333457777777766543
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.55 E-value=4.4e-07 Score=90.09 Aligned_cols=138 Identities=17% Similarity=0.158 Sum_probs=95.5
Q ss_pred CceeEEecCCCccCCCC---CC----CCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEE
Q 044635 572 TTRAILLDYDGTLMPQA---SI----DKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFF 644 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~---~~----~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i 644 (831)
..|+++||+||||++.+ +. .+..+.+-...++.|.+ .|..++|+|+++...+...+..+. +.
T Consensus 6 ~i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L~~-~Gi~laIiT~k~~~~~~~~l~~lg---i~------- 74 (169)
T TIGR02726 6 NIKLVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVLQL-CGIDVAIITSKKSGAVRHRAEELK---IK------- 74 (169)
T ss_pred cCeEEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHHHH-CCCEEEEEECCCcHHHHHHHHHCC---Cc-------
Confidence 37999999999999831 11 12335566677777866 588999999988888777776431 00
Q ss_pred EeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEE
Q 044635 645 RLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTV 724 (831)
Q Consensus 645 ~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v 724 (831)
.|.. .
T Consensus 75 ------~~f~------------------------------------------~--------------------------- 79 (169)
T TIGR02726 75 ------RFHE------------------------------------------G--------------------------- 79 (169)
T ss_pred ------EEEe------------------------------------------c---------------------------
Confidence 0000 0
Q ss_pred EEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----
Q 044635 725 KSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK---- 800 (831)
Q Consensus 725 ~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~---- 800 (831)
+ -.|-..++.+++++ +++++++++|||+.||++|++.++. +++|+++
T Consensus 80 --------~----kpkp~~~~~~~~~l---~~~~~ev~~iGD~~nDi~~~~~ag~--------------~~am~nA~~~l 130 (169)
T TIGR02726 80 --------I----KKKTEPYAQMLEEM---NISDAEVCYVGDDLVDLSMMKRVGL--------------AVAVGDAVADV 130 (169)
T ss_pred --------C----CCCHHHHHHHHHHc---CcCHHHEEEECCCHHHHHHHHHCCC--------------eEECcCchHHH
Confidence 0 13556788888887 8999999999999999999999985 5666664
Q ss_pred CcccceEeC--Chh-HHHHHHHHHHhh
Q 044635 801 PSKAKYYLD--DTV-EIVRLMQGLACV 824 (831)
Q Consensus 801 ~s~A~y~l~--d~~-eV~~~L~~L~~~ 824 (831)
+..|+|++. +.+ .+..+++.+.+.
T Consensus 131 k~~A~~I~~~~~~~g~v~e~~e~il~~ 157 (169)
T TIGR02726 131 KEAAAYVTTARGGHGAVREVAELILKA 157 (169)
T ss_pred HHhCCEEcCCCCCCCHHHHHHHHHHHh
Confidence 578888874 333 356666666543
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=98.52 E-value=5.2e-06 Score=93.96 Aligned_cols=183 Identities=13% Similarity=0.054 Sum_probs=130.2
Q ss_pred CCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCC-cEEEEEEecC-CCCCchhHHHHHHHHHHHHHHHhccCCCCCC
Q 044635 337 QGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQG-KVVLVQIANP-ARGRGKDVKEVQAETYSTVERINQTFGKPGY 414 (831)
Q Consensus 337 ~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~-~vvLvqig~p-~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~ 414 (831)
..+.+...+-|+.+-||+...|.||..+...-|+..- ...++..|++ .-+...+..++.+++.+++++.+ .+|
T Consensus 271 ~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~-l~g---- 345 (495)
T KOG0853|consen 271 GIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYD-LLG---- 345 (495)
T ss_pred ccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhC-ccC----
Confidence 3478999999999999999999999999887765111 2345555533 22233444566677777777643 122
Q ss_pred ccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCCC---CCCCCc-eEEEeccccccccc---CCCceeCCCCHH---HH
Q 044635 415 DPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEP---SSPKKS-MLVVSEFIGCSPSL---SGAIRVNPWNID---AV 484 (831)
Q Consensus 415 ~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~---~~~~~g-~lVlSe~~G~~~~l---~~allVnP~d~~---~~ 484 (831)
.++++..+.++.+.+.+++.+.+.++++..|-|+. +++.+| |+|++..+|.++++ .+|++++| +.+ .+
T Consensus 346 -~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp-~~e~~~~~ 423 (495)
T KOG0853|consen 346 -QFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDP-GQEAVAEL 423 (495)
T ss_pred -ceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCC-chHHHHHH
Confidence 46667667888888888888888899998897732 334444 77777777788877 57999999 676 59
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHhhhhcc-CCHHHHHHHHHHHHHHHHH
Q 044635 485 SDAMDSALEMADQEKQLRHEKHYRYVST-HDVGYWARSFLQDLERTCR 531 (831)
Q Consensus 485 A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~~l~~~~~ 531 (831)
|++|.++.+.|. .+.+..++.++.|.+ +++ +.|.+.+.....
T Consensus 424 a~~~~kl~~~p~-l~~~~~~~G~~rV~e~fs~----~~~~~ri~~~~~ 466 (495)
T KOG0853|consen 424 ADALLKLRRDPE-LWARMGKNGLKRVKEMFSW----QHYSERIASVLG 466 (495)
T ss_pred HHHHHHHhcCHH-HHHHHHHHHHHHHHHHHhH----HHHHHHHHHHhH
Confidence 999999998654 477777788999988 554 555555554443
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=98.48 E-value=6e-06 Score=96.40 Aligned_cols=271 Identities=13% Similarity=0.132 Sum_probs=165.8
Q ss_pred HHHHHHHHHHHHHHHH----cCCCCCEEE--EeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCC--hHHHHH
Q 044635 182 AYVSVNKIFADRIMEV----INPEDDFVW--VHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPI--REEILR 253 (831)
Q Consensus 182 ~Y~~vN~~fa~~i~~~----~~~~~d~vw--vhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~--r~eil~ 253 (831)
.|...+..++..+.+. .. ++|++. ++.-|... +....|..++.+..|+ ... |. -+..+.
T Consensus 202 ~f~~~~eLi~efl~~l~~~~~~-~~d~~Iva~Dr~~~~~----~~~~~~~~~~~ls~f~---~~~-----~~~~y~~~l~ 268 (519)
T TIGR03713 202 EYSNMDELIREKFQRYLKVEVK-DDDEIIVASDDRHNFL----VADTFPAKNLIFSLFS---ERN-----RHHTYLDLYE 268 (519)
T ss_pred EECCHHHHHHHHHHHHHHhhCC-CCCEEEEEcCchhhhh----HhhcCccceEEEEecc---Ccc-----cccchhhhhh
Confidence 3445555555554433 33 457777 67667665 4444554445556665 111 22 256666
Q ss_pred HHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHH
Q 044635 254 ALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQ 333 (831)
Q Consensus 254 ~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~ 333 (831)
.+-.+|.|..-|.+-.+...... +. .. ...+|..+|++.= +.. + ...++
T Consensus 269 ~~~~~d~iIv~T~~q~~~l~~~~----~~------------~~-~~~~v~~Ip~~~~--~~~-----~-------~~s~r 317 (519)
T TIGR03713 269 SLSRADLIIVDREDIERLLEENY----RE------------NY-VEFDISRITPFDT--RLR-----L-------GQSQQ 317 (519)
T ss_pred ChhhcCeEEEcCHHHHHHHHHHh----hh------------cc-cCCcceeeCccce--EEe-----c-------Chhhc
Confidence 77778877766654444332211 00 00 1123444565533 110 0 11123
Q ss_pred hccCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCC
Q 044635 334 FHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPG 413 (831)
Q Consensus 334 ~~~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~ 413 (831)
. .++.|.+++||| +.|-+...|+|+.++++++|+.. |.+.|.. .. .++.+.+.++++++|..++...
T Consensus 318 ~--~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~----L~~~gy~---~~---~~~~~~l~~~i~~~~~~~~~~~ 384 (519)
T TIGR03713 318 L--YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYE----LKILTYN---ND---NDITQLLEDILEQINEEYNQDK 384 (519)
T ss_pred c--cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeE----EEEEEec---Cc---hhHHHHHHHHHHHHHhhhchhh
Confidence 3 567788888899 99999999999999999999876 7777732 11 2345666677777766532210
Q ss_pred -C---------------------ccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCCC--CCCCCceEEEecccccccc
Q 044635 414 -Y---------------------DPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEP--SSPKKSMLVVSEFIGCSPS 469 (831)
Q Consensus 414 -~---------------------~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~--~~~~~g~lVlSe~~G~~~~ 469 (831)
+ ...+.+.+..+..++.+.|.-|.++|.+|..||+.. ++...|.+++ .-|.++.
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~~~ieAiS~GiPqI--nyg~~~~ 462 (519)
T TIGR03713 385 NFFSLSEQDENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLYTQISGISAGIPQI--NKVETDY 462 (519)
T ss_pred hccccchhhhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChHHHHHHHHcCCCee--ecCCcee
Confidence 0 025667777777899999999999999999999932 2334565555 5566766
Q ss_pred c---CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCC
Q 044635 470 L---SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHD 514 (831)
Q Consensus 470 l---~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 514 (831)
+ .+|.+| .|+.++++||...|+.+. ....-....++...+++
T Consensus 463 V~d~~NG~li--~d~~~l~~al~~~L~~~~-~wn~~~~~sy~~~~~yS 507 (519)
T TIGR03713 463 VEHNKNGYII--DDISELLKALDYYLDNLK-NWNYSLAYSIKLIDDYS 507 (519)
T ss_pred eEcCCCcEEe--CCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhh
Confidence 6 489999 689999999999998543 33333333444444443
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.46 E-value=2e-05 Score=88.79 Aligned_cols=139 Identities=15% Similarity=0.106 Sum_probs=85.9
Q ss_pred HHHHHhc-cCCcEE-EEe-ccCcccccC-HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHH
Q 044635 329 ELIKQFH-DQGKVM-LLG-VDDMDIFKG-ISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVER 404 (831)
Q Consensus 329 ~lr~~~~-~~~~~i-il~-VdRld~~KG-i~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~ 404 (831)
.++++++ +.++++ ++. -+|....|+ ++.+++|++.+.+++|+++ +++++. +++.. +++++++.+
T Consensus 175 ~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~----~ii~~~----~~~~~----~~~~~~~~~ 242 (380)
T PRK00025 175 AARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLR----FVLPLV----NPKRR----EQIEEALAE 242 (380)
T ss_pred HHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEecC----ChhhH----HHHHHHHhh
Confidence 4566776 445554 343 347766554 6889999999988888764 776652 12222 333333332
Q ss_pred HhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCc---cCCCCCCCCCceEEEe-----------------ccc
Q 044635 405 INQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVR---DGSEPSSPKKSMLVVS-----------------EFI 464 (831)
Q Consensus 405 IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~---eGma~~~~~~g~lVlS-----------------e~~ 464 (831)
. + ++ .+.++. .++..+|+.||+++++|-. |-|++ +.|+|++ .+.
T Consensus 243 ~----~--~~-~v~~~~-----~~~~~~~~~aDl~v~~sG~~~lEa~a~----G~PvI~~~~~~~~~~~~~~~~~~~~~~ 306 (380)
T PRK00025 243 Y----A--GL-EVTLLD-----GQKREAMAAADAALAASGTVTLELALL----KVPMVVGYKVSPLTFWIAKRLVKVPYV 306 (380)
T ss_pred c----C--CC-CeEEEc-----ccHHHHHHhCCEEEECccHHHHHHHHh----CCCEEEEEccCHHHHHHHHHHHcCCee
Confidence 1 0 11 244433 3789999999999998811 33344 4566666 333
Q ss_pred ccccccC-----CCceeCCCCHHHHHHHHHHHhcCC
Q 044635 465 GCSPSLS-----GAIRVNPWNIDAVSDAMDSALEMA 495 (831)
Q Consensus 465 G~~~~l~-----~allVnP~d~~~~A~ai~~aL~m~ 495 (831)
|.+..+. .+++++..|+++++++|.+.|+.+
T Consensus 307 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~ 342 (380)
T PRK00025 307 SLPNLLAGRELVPELLQEEATPEKLARALLPLLADG 342 (380)
T ss_pred ehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCH
Confidence 3344442 236778889999999999999854
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.38 E-value=6.1e-07 Score=88.19 Aligned_cols=67 Identities=12% Similarity=0.213 Sum_probs=53.9
Q ss_pred eEEecCCCccCCCCCCC-----------CCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHH---HHhCC-------CCC
Q 044635 575 AILLDYDGTLMPQASID-----------KSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLA---EWFSP-------CEN 633 (831)
Q Consensus 575 li~~D~DGTLl~~~~~~-----------~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~---~~~~~-------~~~ 633 (831)
++++|+||||+. .+ ...++.+.++++++.+ .|+.|+++|||+..... +|+.. ++.
T Consensus 1 iVisDIDGTL~~---sd~~~~~~~~~~~~~~~~~~~~a~~~l~~-~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~ 76 (157)
T smart00775 1 IVISDIDGTITK---SDVLGHVVPIIGKDWTHPGVAKLYRDIQN-NGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH 76 (157)
T ss_pred CEEEecCCCCcc---cccccccccccccCcCCHHHHHHHHHHHH-cCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC
Confidence 589999999998 34 5789999999999977 69999999999988764 67755 344
Q ss_pred ceEEecCCEEEE
Q 044635 634 LGIAAEHGYFFR 645 (831)
Q Consensus 634 ~~liaenGa~i~ 645 (831)
.++++.||+.+.
T Consensus 77 g~li~~~g~~~~ 88 (157)
T smart00775 77 GPVLLSPDRLFA 88 (157)
T ss_pred ceEEEcCCcchh
Confidence 467777777654
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=7.4e-06 Score=90.87 Aligned_cols=229 Identities=14% Similarity=0.075 Sum_probs=125.5
Q ss_pred HHHHcCCCCCEEEEeCccccc--hHHHH-Hh-hcCCCeEEEEEeccCCChHHhhcCC-ChHHHHHHHhcCCeEeecCHHh
Q 044635 194 IMEVINPEDDFVWVHDYHLMV--LPTFL-RK-RFNRVKLGFFLHSPFPSSEIYKTLP-IREEILRALLNSDLIGFHTFDY 268 (831)
Q Consensus 194 i~~~~~~~~d~vwvhDyhL~l--lp~~l-r~-~~~~~~i~~flH~PfP~~e~f~~lp-~r~eil~~ll~~dligf~t~~~ 268 (831)
+...+++ +|+|.+|-.-+.. ++..+ ++ +..++|+++++|-=+|.. +.... .+......+-.||.|..++...
T Consensus 58 ~~~~~~~-~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~--~~~~~~~~~~~~~~~~~aD~iI~~S~~~ 134 (333)
T PRK09814 58 ILASLKP-GDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLR--FDSNYYLMKEEIDMLNLADVLIVHSKKM 134 (333)
T ss_pred HHhcCCC-CCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHh--ccccchhhHHHHHHHHhCCEEEECCHHH
Confidence 3444666 4999998633221 22322 22 112699999999766532 11111 1222344445689999998876
Q ss_pred HHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCc
Q 044635 269 ARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDM 348 (831)
Q Consensus 269 ~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRl 348 (831)
.+.+.+ .|.. ..++.+.|+..+.... ..+... .+++.|+++||+
T Consensus 135 ~~~l~~-----~g~~---------------~~~i~~~~~~~~~~~~--------------~~~~~~--~~~~~i~yaG~l 178 (333)
T PRK09814 135 KDRLVE-----EGLT---------------TDKIIVQGIFDYLNDI--------------ELVKTP--SFQKKINFAGNL 178 (333)
T ss_pred HHHHHH-----cCCC---------------cCceEecccccccccc--------------cccccc--cCCceEEEecCh
Confidence 555542 1211 1122233332222100 001111 345689999999
Q ss_pred ccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHH
Q 044635 349 DIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYE 428 (831)
Q Consensus 349 d~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~e 428 (831)
....++. +..|+++ |+++|.. ++.. . ....|. +.|.++.+|
T Consensus 179 ~k~~~l~----------~~~~~~~----l~i~G~g-----~~~~-------~------------~~~~V~-f~G~~~~ee 219 (333)
T PRK09814 179 EKSPFLK----------NWSQGIK----LTVFGPN-----PEDL-------E------------NSANIS-YKGWFDPEE 219 (333)
T ss_pred hhchHHH----------hcCCCCe----EEEECCC-----cccc-------c------------cCCCeE-EecCCCHHH
Confidence 8433211 1245544 8888832 2211 0 011344 567899999
Q ss_pred HHHHHHHcCEeEECCC-------ccC------------CCCCCCCCceEEEeccccccccc---CCCceeCCCCHHHHHH
Q 044635 429 RIAYYVVAECCLVTAV-------RDG------------SEPSSPKKSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSD 486 (831)
Q Consensus 429 l~aly~~ADv~vvtS~-------~eG------------ma~~~~~~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ 486 (831)
+..+|+. |+.+++.- .+. ||+ +.|+|++..++.++.+ ..|+.|+ +.+++++
T Consensus 220 l~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~----G~PVI~~~~~~~~~~V~~~~~G~~v~--~~~el~~ 292 (333)
T PRK09814 220 LPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAA----GLPVIVWSKAAIADFIVENGLGFVVD--SLEELPE 292 (333)
T ss_pred HHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHC----CCCEEECCCccHHHHHHhCCceEEeC--CHHHHHH
Confidence 9999998 76665431 111 355 6688888888777777 3588887 6789999
Q ss_pred HHHHHhcCCHHHHHHHHHHHhhhh
Q 044635 487 AMDSALEMADQEKQLRHEKHYRYV 510 (831)
Q Consensus 487 ai~~aL~m~~~er~~r~~~~~~~v 510 (831)
+|... +++++.+..++.++..
T Consensus 293 ~l~~~---~~~~~~~m~~n~~~~~ 313 (333)
T PRK09814 293 IIDNI---TEEEYQEMVENVKKIS 313 (333)
T ss_pred HHHhc---CHHHHHHHHHHHHHHH
Confidence 98874 3455444334444433
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.8e-06 Score=82.01 Aligned_cols=124 Identities=19% Similarity=0.229 Sum_probs=79.3
Q ss_pred cEEEEeccCcccccCHHHHHH-HHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccE
Q 044635 339 KVMLLGVDDMDIFKGISLKLL-AMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPV 417 (831)
Q Consensus 339 ~~iil~VdRld~~KGi~~~l~-A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv 417 (831)
..+|++.|++.+.||+..+++ |++++.+++|+++ |+++|.. ++ ++.++ .. ..|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~----l~i~G~~-----~~------~l~~~-~~----------~~v 55 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIE----LIIIGNG-----PD------ELKRL-RR----------PNV 55 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEE----EEEECES-----S-------HHCCH-HH----------CTE
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEE----EEEEeCC-----HH------HHHHh-cC----------CCE
Confidence 357999999999999999999 9999999999755 8888852 22 12222 00 135
Q ss_pred EEecCCCCHHHHHHHHHHcCEeEECCC-ccCCCC---CC-CCCceEEEeccccccccc---CCCceeCCCCHHHHHHHHH
Q 044635 418 VLIDEPLKFYERIAYYVVAECCLVTAV-RDGSEP---SS-PKKSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMD 489 (831)
Q Consensus 418 ~~~~~~v~~~el~aly~~ADv~vvtS~-~eGma~---~~-~~~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~ 489 (831)
.+ .+.+ +|+.++|+.||+++.|+. .+|+.. +. ..+.|+|++.. |+.... ..++.+ +.|+++++++|.
T Consensus 56 ~~-~g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~ 130 (135)
T PF13692_consen 56 RF-HGFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIE 130 (135)
T ss_dssp EE-E-S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHH
T ss_pred EE-cCCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHH
Confidence 55 4456 689999999999999985 555510 11 12557777777 655555 345666 889999999999
Q ss_pred HHhc
Q 044635 490 SALE 493 (831)
Q Consensus 490 ~aL~ 493 (831)
+++.
T Consensus 131 ~l~~ 134 (135)
T PF13692_consen 131 RLLN 134 (135)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 9875
|
|
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=98.33 E-value=2e-05 Score=95.02 Aligned_cols=181 Identities=13% Similarity=0.085 Sum_probs=114.2
Q ss_pred CcEEEEeccCcccccCHHHHHHHHHHHHH--hCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCc
Q 044635 338 GKVMLLGVDDMDIFKGISLKLLAMEQLLI--QHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYD 415 (831)
Q Consensus 338 ~~~iil~VdRld~~KGi~~~l~A~~~lL~--~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~ 415 (831)
+..+|.++.|+..-|+..+++..++++++ .+|+ ..+.||..|...-.+. .-.++.+++.+++.. -+|. +
T Consensus 477 d~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d~-~gK~iIk~i~~~a~~--p~~~--~-- 547 (778)
T cd04299 477 NVLTIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPADE-PGKELIQEIVEFSRR--PEFR--G-- 547 (778)
T ss_pred CccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccch-HHHHHHHHHHHHHhC--cCCC--C--
Confidence 34489999999999999999999999865 3454 3577888775432221 113445555555441 0222 1
Q ss_pred cEEEecCCCCHHHHHHHHHHcCEeEECCC--ccCCCC---CCCCCceEEEeccccccccc---CCCceeCC---------
Q 044635 416 PVVLIDEPLKFYERIAYYVVAECCLVTAV--RDGSEP---SSPKKSMLVVSEFIGCSPSL---SGAIRVNP--------- 478 (831)
Q Consensus 416 pv~~~~~~v~~~el~aly~~ADv~vvtS~--~eGma~---~~~~~g~lVlSe~~G~~~~l---~~allVnP--------- 478 (831)
.|+|+.+ .+-.--..++..||+++.||. .|.-+. -+...|.|-+|..-|.-.+- .+|..+.+
T Consensus 548 kVvfle~-Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~~g~nGwaig~~~~~~~~~~ 626 (778)
T cd04299 548 RIVFLED-YDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGYDGENGWAIGDGDEYEDDEY 626 (778)
T ss_pred cEEEEcC-CCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCccccccCCCCceEeCCCccccChhh
Confidence 4777664 555566778999999999999 662211 12336889999888876666 46888877
Q ss_pred ---CCHHHHHHHHHHHhc----CC-----HHHHHHHHHH-HhhhhccCCHHHHHHHHHHHHHH
Q 044635 479 ---WNIDAVSDAMDSALE----MA-----DQEKQLRHEK-HYRYVSTHDVGYWARSFLQDLER 528 (831)
Q Consensus 479 ---~d~~~~A~ai~~aL~----m~-----~~er~~r~~~-~~~~v~~~~~~~W~~~~l~~l~~ 528 (831)
.|.+++-+.|.+.+- .. +.+...+++. +......+++.+.++.+++.+..
T Consensus 627 ~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y~ 689 (778)
T cd04299 627 QDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFYL 689 (778)
T ss_pred cchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhHH
Confidence 555666666654443 10 1223333333 34444567888888877777663
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=98.17 E-value=3.1e-05 Score=82.19 Aligned_cols=65 Identities=14% Similarity=0.213 Sum_probs=50.7
Q ss_pred eeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECC---CCHhhHHHHhCCC----CCceEEecCCEE
Q 044635 574 RAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSA---KSRKTLAEWFSPC----ENLGIAAEHGYF 643 (831)
Q Consensus 574 rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG---R~~~~l~~~~~~~----~~~~liaenGa~ 643 (831)
|+|++|+||||+. .+..+ +.+.++|++|.+ .|..|+++|| |+...+...+..+ ....+++.+|+.
T Consensus 2 ~~~~~D~DGtl~~---~~~~i-~~a~~~l~~l~~-~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~~ 73 (249)
T TIGR01457 2 KGYLIDLDGTMYK---GKERI-PEAETFVHELQK-RDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMAT 73 (249)
T ss_pred CEEEEeCCCceEc---CCeeC-cCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHHH
Confidence 6899999999998 44444 479999999987 5999999985 8898888877654 233467777664
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.12 E-value=2.4e-05 Score=81.22 Aligned_cols=62 Identities=24% Similarity=0.303 Sum_probs=48.5
Q ss_pred CHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC---CcccceEeCC--hhH
Q 044635 739 NKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK---PSKAKYYLDD--TVE 813 (831)
Q Consensus 739 nKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~---~s~A~y~l~d--~~e 813 (831)
.|...++.+++.+ ++++++++++||+.+|++|.+.++. ++.++.. ...|+|++.+ ..+
T Consensus 152 ~k~~~~~~~~~~~---~~~~~~~i~iGDs~~Di~aa~~ag~--------------~i~~~~~~~~~~~a~~~i~~~~~~~ 214 (219)
T TIGR00338 152 YKGKTLLILLRKE---GISPENTVAVGDGANDLSMIKAAGL--------------GIAFNAKPKLQQKADICINKKDLTD 214 (219)
T ss_pred ccHHHHHHHHHHc---CCCHHHEEEEECCHHHHHHHHhCCC--------------eEEeCCCHHHHHhchhccCCCCHHH
Confidence 4889999999987 8999999999999999999999974 3444443 3678898864 455
Q ss_pred HHHH
Q 044635 814 IVRL 817 (831)
Q Consensus 814 V~~~ 817 (831)
++.+
T Consensus 215 ~~~~ 218 (219)
T TIGR00338 215 ILPL 218 (219)
T ss_pred HHhh
Confidence 5544
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=98.11 E-value=6.3e-05 Score=80.24 Aligned_cols=49 Identities=18% Similarity=0.283 Sum_probs=40.8
Q ss_pred eeEEecCCCccCCCCCCCC---CCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHH
Q 044635 574 RAILLDYDGTLMPQASIDK---SPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAE 626 (831)
Q Consensus 574 rli~~D~DGTLl~~~~~~~---~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~ 626 (831)
|+|++|+||||+. .+. .+.+.+.++|++|.+ .|..++++|||+......
T Consensus 2 k~i~~D~DGtl~~---~~~~~~~~~~~a~~al~~l~~-~G~~~~~~Tn~~~~~~~~ 53 (257)
T TIGR01458 2 KGVLLDISGVLYI---SDAKSGVAVPGSQEAVKRLRG-ASVKVRFVTNTTKESKQD 53 (257)
T ss_pred CEEEEeCCCeEEe---CCCcccCcCCCHHHHHHHHHH-CCCeEEEEECCCCCCHHH
Confidence 6899999999998 333 378899999999987 599999999988775333
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.6e-05 Score=79.32 Aligned_cols=41 Identities=32% Similarity=0.494 Sum_probs=36.4
Q ss_pred EeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHc
Q 044635 734 KPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVI 777 (831)
Q Consensus 734 ~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a 777 (831)
.+.+.+|+.+++.+++.. +++++.++++||+.||++|++.+
T Consensus 137 ~~~~~~K~~~l~~~~~~~---~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEES---KITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHh---CCCHHHEEEEeCCHHHHHHHhcC
Confidence 366889999999998876 88899999999999999999864
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.00015 Score=76.80 Aligned_cols=54 Identities=17% Similarity=0.227 Sum_probs=45.2
Q ss_pred ceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
+++|++|+||||+. .+ .+.+.+.++|++|.+ .|..++++|+|+......+...+
T Consensus 1 ~~~v~~DlDGtL~~---~~-~~~p~a~~~l~~L~~-~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 1 IKNVICDIDGVLMH---DN-VAVPGAAEFLHRILD-KGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CcEEEEeCCCceEe---CC-eeCccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHH
Confidence 47999999999998 34 678999999999987 59999999999987666655544
|
|
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.0034 Score=69.73 Aligned_cols=298 Identities=17% Similarity=0.239 Sum_probs=167.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCEEEEeCcc----ccchHH--HHHhhcCCCeEEEEEecc---------CCChHHhhcCCCh
Q 044635 184 VSVNKIFADRIMEVINPEDDFVWVHDYH----LMVLPT--FLRKRFNRVKLGFFLHSP---------FPSSEIYKTLPIR 248 (831)
Q Consensus 184 ~~vN~~fa~~i~~~~~~~~d~vwvhDyh----L~llp~--~lr~~~~~~~i~~flH~P---------fP~~e~f~~lp~r 248 (831)
.+.+++|+- ......|++..||+|-=. ..++|- -||+++|+.+|..+--+| ||..-.-..+|..
T Consensus 32 ~r~~eRfg~-~~~~~~~~~p~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP~D 110 (419)
T COG1519 32 KRLGERFGF-YKPPVKPEGPLVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLPLD 110 (419)
T ss_pred HHHHHHhcc-cCCCCCCCCCeEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecCcC
Confidence 467778871 123344667899999544 234444 489999999999988776 4433333445532
Q ss_pred H-HHHHHHh---cCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEE---------------------EEEE
Q 044635 249 E-EILRALL---NSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRT---------------------VSIK 303 (831)
Q Consensus 249 ~-eil~~ll---~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~---------------------~~i~ 303 (831)
. -..+..| ..|+..|---+.=-|++..|.+. |+. .+-.++|- +...
T Consensus 111 ~~~~v~rFl~~~~P~l~Ii~EtElWPnli~e~~~~-~~p--------~~LvNaRLS~rS~~~y~k~~~~~~~~~~~i~li 181 (419)
T COG1519 111 LPIAVRRFLRKWRPKLLIIMETELWPNLINELKRR-GIP--------LVLVNARLSDRSFARYAKLKFLARLLFKNIDLI 181 (419)
T ss_pred chHHHHHHHHhcCCCEEEEEeccccHHHHHHHHHc-CCC--------EEEEeeeechhhhHHHHHHHHHHHHHHHhccee
Confidence 1 1222222 44666665555556666666432 111 01111211 0111
Q ss_pred EeecccChHHHHHhh---------------CCcchHHHHHHHHHHhccCC-cEEEEeccCcccccCHHHHHHHHHHHHHh
Q 044635 304 ILPVGIHMGQLQSVL---------------SLPGTEAKVSELIKQFHDQG-KVMLLGVDDMDIFKGISLKLLAMEQLLIQ 367 (831)
Q Consensus 304 v~P~GId~~~~~~~~---------------~~~~~~~~~~~lr~~~~~~~-~~iil~VdRld~~KGi~~~l~A~~~lL~~ 367 (831)
+.=.-.|.++|.... ..+........+|.++ ++ +++++..+- ...--...+.|+..++++
T Consensus 182 ~aQse~D~~Rf~~LGa~~v~v~GNlKfd~~~~~~~~~~~~~~r~~l--~~~r~v~iaaST--H~GEeei~l~~~~~l~~~ 257 (419)
T COG1519 182 LAQSEEDAQRFRSLGAKPVVVTGNLKFDIEPPPQLAAELAALRRQL--GGHRPVWVAAST--HEGEEEIILDAHQALKKQ 257 (419)
T ss_pred eecCHHHHHHHHhcCCcceEEecceeecCCCChhhHHHHHHHHHhc--CCCCceEEEecC--CCchHHHHHHHHHHHHhh
Confidence 112223333333211 1233445667888888 44 888888887 333334478899999999
Q ss_pred CCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCC-------CCccEEEecCCCCHHHHHHHHHHcCEeE
Q 044635 368 HPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKP-------GYDPVVLIDEPLKFYERIAYYVVAECCL 440 (831)
Q Consensus 368 ~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~-------~~~pv~~~~~~v~~~el~aly~~ADv~v 440 (831)
+|+.. ||. . | +.++ --..+++++.+.+-+++.- .-++|.+.+ +.-|+..||++||+++
T Consensus 258 ~~~~l----lIl-V-P---RHpE---Rf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~D---tmGEL~l~y~~adiAF 322 (419)
T COG1519 258 FPNLL----LIL-V-P---RHPE---RFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGD---TMGELGLLYGIADIAF 322 (419)
T ss_pred CCCce----EEE-e-c---CChh---hHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEe---cHhHHHHHHhhccEEE
Confidence 99863 333 3 3 2333 3467888888887655321 122455433 3679999999999998
Q ss_pred ECCCccCCCC----CCCCCc-eEEEeccc----cccccc---CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhh
Q 044635 441 VTAVRDGSEP----SSPKKS-MLVVSEFI----GCSPSL---SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYR 508 (831)
Q Consensus 441 vtS~~eGma~----~~~~~g-~lVlSe~~----G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~ 508 (831)
|--.-..++. ++...+ |+|...++ -.++.+ .+++.|+. .+.+++++...+.. +++|....++...
T Consensus 323 VGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~--~~~l~~~v~~l~~~-~~~r~~~~~~~~~ 399 (419)
T COG1519 323 VGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQVED--ADLLAKAVELLLAD-EDKREAYGRAGLE 399 (419)
T ss_pred ECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEECC--HHHHHHHHHHhcCC-HHHHHHHHHHHHH
Confidence 8544333422 222233 44444333 233333 34677775 77788888777764 6666666666666
Q ss_pred hhccC
Q 044635 509 YVSTH 513 (831)
Q Consensus 509 ~v~~~ 513 (831)
.+.++
T Consensus 400 ~v~~~ 404 (419)
T COG1519 400 FLAQN 404 (419)
T ss_pred HHHHh
Confidence 66554
|
|
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.00017 Score=76.72 Aligned_cols=308 Identities=15% Similarity=0.225 Sum_probs=179.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHH---cC-CCCCEEEE--eCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHH
Q 044635 177 RSLWQAYVSVNKIFADRIMEV---IN-PEDDFVWV--HDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREE 250 (831)
Q Consensus 177 ~~~w~~Y~~vN~~fa~~i~~~---~~-~~~d~vwv--hDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~e 250 (831)
...|..+.-.-|..+.-|+.. ++ |. | ||| -.|-+.. |.+ | ++.+.|+|-..|-|--|.+....+-.|++
T Consensus 123 a~~~~hfTllgQaigsmIl~~Eai~r~~P-d-i~IDtMGY~fs~-p~~-r-~l~~~~V~aYvHYP~iS~DML~~l~qrq~ 197 (465)
T KOG1387|consen 123 ASTWKHFTLLGQAIGSMILAFEAIIRFPP-D-IFIDTMGYPFSY-PIF-R-RLRRIPVVAYVHYPTISTDMLKKLFQRQK 197 (465)
T ss_pred cccccceehHHHHHHHHHHHHHHHHhCCc-h-heEecCCCcchh-HHH-H-HHccCceEEEEecccccHHHHHHHHhhhh
Confidence 344666666666665555421 22 21 3 777 3555443 433 2 26789999999988878877765544332
Q ss_pred HHHHHhcCCeEeecCHHhHHHHHHHHHHHhCC--eec----c-cCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcch
Q 044635 251 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGL--TYE----S-KRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGT 323 (831)
Q Consensus 251 il~~ll~~dligf~t~~~~~~Fl~~~~r~l~~--~~~----~-~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~ 323 (831)
= .+...----|-|-|..--. ..|. ++- + .+.+|.--+..++++| ++|+. +.+.+
T Consensus 198 s-------~~l~~~KlaY~rlFa~lY~-~~G~~ad~vm~NssWT~nHI~qiW~~~~~~i-VyPPC-~~e~l--------- 258 (465)
T KOG1387|consen 198 S-------GILVWGKLAYWRLFALLYQ-SAGSKADIVMTNSSWTNNHIKQIWQSNTCSI-VYPPC-STEDL--------- 258 (465)
T ss_pred c-------chhhhHHHHHHHHHHHHHH-hccccceEEEecchhhHHHHHHHhhccceeE-EcCCC-CHHHH---------
Confidence 1 1222222345555532110 0111 000 0 0111211222333333 34432 33333
Q ss_pred HHHHHHHHHHhc--cCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCC--CCCcEEEEEEecCCCCCchhHHHHHHHHH
Q 044635 324 EAKVSELIKQFH--DQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPE--WQGKVVLVQIANPARGRGKDVKEVQAETY 399 (831)
Q Consensus 324 ~~~~~~lr~~~~--~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~--~~~~vvLvqig~p~r~~~~~~~~l~~~i~ 399 (831)
++.++ ......+|+++.+.|.|+.. .|+-+...+.+.|. .-.++.|+++|+- |+ ++-++.-+.++
T Consensus 259 -------ks~~~te~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGSc-Rn--eeD~ervk~Lk 327 (465)
T KOG1387|consen 259 -------KSKFGTEGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGSC-RN--EEDEERVKSLK 327 (465)
T ss_pred -------HHHhcccCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEecc-CC--hhhHHHHHHHH
Confidence 22232 24467899999999999999 77777788888887 3346778888843 32 33344556677
Q ss_pred HHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCCC---CCCCCceEEEecccccc--ccc----
Q 044635 400 STVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEP---SSPKKSMLVVSEFIGCS--PSL---- 470 (831)
Q Consensus 400 ~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~---~~~~~g~lVlSe~~G~~--~~l---- 470 (831)
.++.+++..- .|. |.-.+|.+++..+|.-|-+.|-+-..|-|+. +.+..|.+.++...|.. +.+
T Consensus 328 d~a~~L~i~~------~v~-F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~ 400 (465)
T KOG1387|consen 328 DLAEELKIPK------HVQ-FEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWD 400 (465)
T ss_pred HHHHhcCCcc------ceE-EEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccC
Confidence 7777665321 244 4558999999999999999999888875521 22233444444443322 111
Q ss_pred --CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHH
Q 044635 471 --SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLER 528 (831)
Q Consensus 471 --~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 528 (831)
.+|++. | +.++-|++|.+++++..+||....+..+..+.++.-....++|...+..
T Consensus 401 G~~tGFla-~-t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~k 458 (465)
T KOG1387|consen 401 GETTGFLA-P-TDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICK 458 (465)
T ss_pred Cccceeec-C-ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHH
Confidence 145665 3 5678999999999999999877767777777776666666666544443
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00016 Score=78.17 Aligned_cols=49 Identities=24% Similarity=0.387 Sum_probs=38.9
Q ss_pred ceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHH
Q 044635 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAE 626 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~ 626 (831)
.++|++|+||||+. .. .+.+.+.++|++|.+ .|..++++|+|+......
T Consensus 2 ~~~~~~D~DGtl~~---~~-~~~~ga~e~l~~L~~-~g~~~~~~Tnns~~~~~~ 50 (279)
T TIGR01452 2 AQGFIFDCDGVLWL---GE-RVVPGAPELLDRLAR-AGKAALFVTNNSTKSRAE 50 (279)
T ss_pred ccEEEEeCCCceEc---CC-eeCcCHHHHHHHHHH-CCCeEEEEeCCCCCCHHH
Confidence 57999999999998 33 345669999999976 599999999987554443
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=97.93 E-value=1.5e-05 Score=74.81 Aligned_cols=51 Identities=16% Similarity=0.260 Sum_probs=41.3
Q ss_pred eeEEecCCCccCCCCC---CCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHH
Q 044635 574 RAILLDYDGTLMPQAS---IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLA 625 (831)
Q Consensus 574 rli~~D~DGTLl~~~~---~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~ 625 (831)
|+|++|+||||+.... ....+.++++++|++|.+ .|+.|+++|||+.....
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~-~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKA-LGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHH-CCCEEEEECCCCchhhh
Confidence 6999999999997321 113477999999999976 59999999999987654
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00031 Score=75.61 Aligned_cols=70 Identities=19% Similarity=0.259 Sum_probs=57.2
Q ss_pred CHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC------CcccceEeCChh
Q 044635 739 NKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK------PSKAKYYLDDTV 812 (831)
Q Consensus 739 nKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~------~s~A~y~l~d~~ 812 (831)
.|..++.++++++ +++++++++|||+.+|+.+-+.+|.. .++|.-|.. ...|+|++++..
T Consensus 196 ~k~~~~~~~l~~~---~~~p~~~l~IGDs~~Di~aA~~AG~~-----------~I~v~~g~~~~~~l~~~~ad~~i~~~~ 261 (273)
T PRK13225 196 SKRRALSQLVARE---GWQPAAVMYVGDETRDVEAARQVGLI-----------AVAVTWGFNDRQSLVAACPDWLLETPS 261 (273)
T ss_pred CCHHHHHHHHHHh---CcChhHEEEECCCHHHHHHHHHCCCe-----------EEEEecCCCCHHHHHHCCCCEEECCHH
Confidence 4678888998888 88999999999999999999998752 356666632 246899999999
Q ss_pred HHHHHHHHHH
Q 044635 813 EIVRLMQGLA 822 (831)
Q Consensus 813 eV~~~L~~L~ 822 (831)
++..++..|.
T Consensus 262 eL~~~~~~~~ 271 (273)
T PRK13225 262 DLLQAVTQLM 271 (273)
T ss_pred HHHHHHHHHh
Confidence 9999887764
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.0025 Score=72.20 Aligned_cols=140 Identities=19% Similarity=0.104 Sum_probs=82.3
Q ss_pred HHHHHhc-cCCcEEE--EeccCccc-ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHH
Q 044635 329 ELIKQFH-DQGKVML--LGVDDMDI-FKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVER 404 (831)
Q Consensus 329 ~lr~~~~-~~~~~ii--l~VdRld~-~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~ 404 (831)
+.+++++ +.++++| ++.+|..+ .|+++.+++|++.+.+++|+++ +++++.+ +... ..++++...
T Consensus 180 ~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~----~~~~----~~~~~~~~~ 247 (385)
T TIGR00215 180 SAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVN----FKRR----LQFEQIKAE 247 (385)
T ss_pred HHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCC----chhH----HHHHHHHHH
Confidence 3456666 4556655 34469887 7999999999999999899865 5544422 1111 222222222
Q ss_pred HhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCc---cCCCCCCCCCceEEEe----c-------------cc
Q 044635 405 INQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVR---DGSEPSSPKKSMLVVS----E-------------FI 464 (831)
Q Consensus 405 IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~---eGma~~~~~~g~lVlS----e-------------~~ 464 (831)
. +. +. .+.++.+ +...+|++||++|++|-. |-|++ +.|+|++ - +.
T Consensus 248 ~----~~-~~-~v~~~~~-----~~~~~l~aADl~V~~SGt~tlEa~a~----G~P~Vv~yk~~pl~~~~~~~~~~~~~~ 312 (385)
T TIGR00215 248 Y----GP-DL-QLHLIDG-----DARKAMFAADAALLASGTAALEAALI----KTPMVVGYRMKPLTFLIARRLVKTDYI 312 (385)
T ss_pred h----CC-CC-cEEEECc-----hHHHHHHhCCEEeecCCHHHHHHHHc----CCCEEEEEcCCHHHHHHHHHHHcCCee
Confidence 2 21 11 3444433 456799999999999822 33344 4466666 1 22
Q ss_pred ccccccCC--C---ceeCCCCHHHHHHHHHHHhcCC
Q 044635 465 GCSPSLSG--A---IRVNPWNIDAVSDAMDSALEMA 495 (831)
Q Consensus 465 G~~~~l~~--a---llVnP~d~~~~A~ai~~aL~m~ 495 (831)
+.+..+.+ + ++-+-.+++.+++++.+.|+.+
T Consensus 313 ~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 313 SLPNILANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred eccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 22222311 1 2223356889999999999866
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.0019 Score=74.65 Aligned_cols=105 Identities=9% Similarity=0.091 Sum_probs=54.5
Q ss_pred cEEEecCCCC------HHHHHHHHHHcCEeEECCCccCCCC---C-CCCCceEEEeccccccccc--------CCCcee-
Q 044635 416 PVVLIDEPLK------FYERIAYYVVAECCLVTAVRDGSEP---S-SPKKSMLVVSEFIGCSPSL--------SGAIRV- 476 (831)
Q Consensus 416 pv~~~~~~v~------~~el~aly~~ADv~vvtS~~eGma~---~-~~~~g~lVlSe~~G~~~~l--------~~allV- 476 (831)
.|+|....++ .-++..+.+.+|++|+||.+|.++- + ..-+.|-|.|..+|...-+ ..|+.|
T Consensus 444 KVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~~GV~Vv 523 (633)
T PF05693_consen 444 KVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEEYGVYVV 523 (633)
T ss_dssp EEEE--S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGGGTEEEE
T ss_pred EEEEeeccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccCcCCcEEEE
Confidence 5666544333 3367888999999999999998721 0 1125588889888865333 235554
Q ss_pred CC--CCH----HHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHH
Q 044635 477 NP--WNI----DAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWAR 520 (831)
Q Consensus 477 nP--~d~----~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 520 (831)
+= .+. +++|+.|.....++..+|.....+..+.-..-+|.+...
T Consensus 524 dR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~ 573 (633)
T PF05693_consen 524 DRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGK 573 (633)
T ss_dssp -SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCH
T ss_pred eCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 32 233 566777777778887766554444433333344444433
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=97.75 E-value=5.3e-05 Score=80.43 Aligned_cols=72 Identities=18% Similarity=0.262 Sum_probs=56.4
Q ss_pred CceeEEecCCCccCCCCCCCCCC---CHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC--CC-ceEEecCCEEEE
Q 044635 572 TTRAILLDYDGTLMPQASIDKSP---NSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC--EN-LGIAAEHGYFFR 645 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~---s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~--~~-~~liaenGa~i~ 645 (831)
..++|+||+||||++ ..+.+ ++.+.++|.+|.+ .|..++|+|++++..+...++.+ .. ...|..+|....
T Consensus 125 ~~kvIvFDLDgTLi~---~~~~v~irdPgV~EaL~~Lke-kGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~ 200 (301)
T TIGR01684 125 PPHVVVFDLDSTLIT---DEEPVRIRDPRIYDSLTELKK-RGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAE 200 (301)
T ss_pred cceEEEEecCCCCcC---CCCccccCCHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCcccc
Confidence 467999999999999 44443 6999999999987 59999999999999888877765 22 236667777655
Q ss_pred eC
Q 044635 646 LR 647 (831)
Q Consensus 646 ~~ 647 (831)
..
T Consensus 201 ~k 202 (301)
T TIGR01684 201 EY 202 (301)
T ss_pred CC
Confidence 43
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.0013 Score=72.38 Aligned_cols=53 Identities=19% Similarity=0.256 Sum_probs=43.2
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhC
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFS 629 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~ 629 (831)
+.++|+||+||||+. .+ .+-+.+.++|++|.+ .|..++++|+|+......++.
T Consensus 27 ~~~~~~~D~DGtl~~---~~-~~~~ga~e~l~~lr~-~g~~~~~~TN~~~~~~~~~~~ 79 (311)
T PLN02645 27 SVETFIFDCDGVIWK---GD-KLIEGVPETLDMLRS-MGKKLVFVTNNSTKSRAQYGK 79 (311)
T ss_pred hCCEEEEeCcCCeEe---CC-ccCcCHHHHHHHHHH-CCCEEEEEeCCCCCCHHHHHH
Confidence 478999999999998 34 456888999999977 599999999999665555543
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00031 Score=73.13 Aligned_cols=66 Identities=21% Similarity=0.195 Sum_probs=52.4
Q ss_pred HHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC------CcccceEeCChhHH
Q 044635 741 GLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK------PSKAKYYLDDTVEI 814 (831)
Q Consensus 741 G~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~------~s~A~y~l~d~~eV 814 (831)
-..+..+++.+ |.++++++++||+.+|+.|-+.+|-. .++|+.|.. ...|++++++..++
T Consensus 148 P~~l~~~~~~~---~~~~~~~l~VGDs~~Di~aA~~Ag~~-----------~v~v~~g~~~~~~l~~~~~d~vi~~~~el 213 (220)
T COG0546 148 PEPLLLLLEKL---GLDPEEALMVGDSLNDILAAKAAGVP-----------AVGVTWGYNSREELAQAGADVVIDSLAEL 213 (220)
T ss_pred HHHHHHHHHHh---CCChhheEEECCCHHHHHHHHHcCCC-----------EEEEECCCCCCcchhhcCCCEEECCHHHH
Confidence 35566777776 77778999999999999999999832 367888752 35799999999999
Q ss_pred HHHHHH
Q 044635 815 VRLMQG 820 (831)
Q Consensus 815 ~~~L~~ 820 (831)
...|..
T Consensus 214 ~~~l~~ 219 (220)
T COG0546 214 LALLAE 219 (220)
T ss_pred HHHHhc
Confidence 887753
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00071 Score=70.33 Aligned_cols=73 Identities=16% Similarity=0.142 Sum_probs=48.0
Q ss_pred CCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCCcccceEeCChhHHHH
Q 044635 737 GVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDTVEIVR 816 (831)
Q Consensus 737 gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~s~A~y~l~d~~eV~~ 816 (831)
+..|..+++.+ +..++.+++|||+.||+.|.+.++..++...+ ...-.....+.+..++-.+|.+
T Consensus 146 ~~~K~~~l~~~-------~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l--------~~~~~~~~~~~~~~~~f~ei~~ 210 (219)
T PRK09552 146 GCCKPSLIRKL-------SDTNDFHIVIGDSITDLEAAKQADKVFARDFL--------ITKCEELGIPYTPFETFHDVQT 210 (219)
T ss_pred CCchHHHHHHh-------ccCCCCEEEEeCCHHHHHHHHHCCcceeHHHH--------HHHHHHcCCCccccCCHHHHHH
Confidence 34588776654 56678999999999999999988753211000 0000012345556789999999
Q ss_pred HHHHHHhh
Q 044635 817 LMQGLACV 824 (831)
Q Consensus 817 ~L~~L~~~ 824 (831)
.|+.+.++
T Consensus 211 ~l~~~~~~ 218 (219)
T PRK09552 211 ELKHLLEV 218 (219)
T ss_pred HHHHHhcc
Confidence 99887653
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00061 Score=73.37 Aligned_cols=71 Identities=20% Similarity=0.158 Sum_probs=55.9
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC------CcccceEe
Q 044635 735 PQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK------PSKAKYYL 808 (831)
Q Consensus 735 p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~------~s~A~y~l 808 (831)
+.+-.|...++.+++.+ |++++.+++|||+.+|+.|.+.+|.. .++|+.|.. ...|.+.+
T Consensus 154 ~~~Kp~p~~~~~~~~~~---g~~~~~~l~IGD~~~Di~aA~~aGi~-----------~i~v~~G~~~~~~l~~~~~~~vi 219 (272)
T PRK13223 154 PQKKPDPAALLFVMKMA---GVPPSQSLFVGDSRSDVLAAKAAGVQ-----------CVALSYGYNHGRPIAEESPALVI 219 (272)
T ss_pred CCCCCCcHHHHHHHHHh---CCChhHEEEECCCHHHHHHHHHCCCe-----------EEEEecCCCCchhhhhcCCCEEE
Confidence 44555677899999988 89999999999999999999998742 356666631 24688999
Q ss_pred CChhHHHHHHH
Q 044635 809 DDTVEIVRLMQ 819 (831)
Q Consensus 809 ~d~~eV~~~L~ 819 (831)
++..++..++.
T Consensus 220 ~~l~el~~~~~ 230 (272)
T PRK13223 220 DDLRALLPGCA 230 (272)
T ss_pred CCHHHHHHHHh
Confidence 99999887655
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00026 Score=73.19 Aligned_cols=70 Identities=16% Similarity=0.138 Sum_probs=55.1
Q ss_pred CCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC------CcccceEeCC
Q 044635 737 GVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK------PSKAKYYLDD 810 (831)
Q Consensus 737 gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~------~s~A~y~l~d 810 (831)
+--|...++++++++ +.+++.+++|||+.+|+.+-+.+|.. .++|+-|.. ...|+|.+++
T Consensus 137 ~Kp~p~~~~~~~~~~---~~~~~~~~~iGDs~~Di~aa~~aG~~-----------~i~v~~g~~~~~~l~~~~~~~~i~~ 202 (214)
T PRK13288 137 AKPDPEPVLKALELL---GAKPEEALMVGDNHHDILAGKNAGTK-----------TAGVAWTIKGREYLEQYKPDFMLDK 202 (214)
T ss_pred CCCCcHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCe-----------EEEEcCCCCCHHHHhhcCcCEEECC
Confidence 334678889999988 88999999999999999999999852 345555532 2358899999
Q ss_pred hhHHHHHHHH
Q 044635 811 TVEIVRLMQG 820 (831)
Q Consensus 811 ~~eV~~~L~~ 820 (831)
..++.+++..
T Consensus 203 ~~~l~~~i~~ 212 (214)
T PRK13288 203 MSDLLAIVGD 212 (214)
T ss_pred HHHHHHHHhh
Confidence 9999887754
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0011 Score=66.43 Aligned_cols=49 Identities=22% Similarity=0.213 Sum_probs=37.9
Q ss_pred cCceeEEecCCCccCCCCC----CCCCCCHHHHHHHHHHhhcCCCeEEEECCCC
Q 044635 571 TTTRAILLDYDGTLMPQAS----IDKSPNSKTIDILNSLCRDKNNMVFLVSAKS 620 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~----~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~ 620 (831)
+.+|+|++|.||||..+.. ..-.+-+.+.++|++|.+ .|..++|+|+.+
T Consensus 2 ~~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~-~G~~l~I~Tn~~ 54 (173)
T PRK06769 2 TNIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKA-NHIKIFSFTNQP 54 (173)
T ss_pred CCCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHH-CCCEEEEEECCc
Confidence 4689999999999976432 112345889999999976 589999998765
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0015 Score=65.81 Aligned_cols=65 Identities=12% Similarity=0.096 Sum_probs=48.2
Q ss_pred HHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC-----Cccc--ceEeCChhH
Q 044635 741 GLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK-----PSKA--KYYLDDTVE 813 (831)
Q Consensus 741 G~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~-----~s~A--~y~l~d~~e 813 (831)
-.....+++.+ |.+++++++|||+.+|+.+-+.+|.. ++.+.-|.. ...| ++++++..+
T Consensus 106 p~~~~~~~~~l---~~~~~~~~~VgDs~~Di~~A~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~ii~~l~e 171 (181)
T PRK08942 106 PGMLLSIAERL---NIDLAGSPMVGDSLRDLQAAAAAGVT-----------PVLVRTGKGVTTLAEGAAPGTWVLDSLAD 171 (181)
T ss_pred HHHHHHHHHHc---CCChhhEEEEeCCHHHHHHHHHCCCe-----------EEEEcCCCCchhhhcccCCCceeecCHHH
Confidence 34566677777 88999999999999999999999852 245554532 2345 788888888
Q ss_pred HHHHHH
Q 044635 814 IVRLMQ 819 (831)
Q Consensus 814 V~~~L~ 819 (831)
+.++|.
T Consensus 172 l~~~l~ 177 (181)
T PRK08942 172 LPQALK 177 (181)
T ss_pred HHHHHH
Confidence 887765
|
|
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00034 Score=74.49 Aligned_cols=72 Identities=19% Similarity=0.208 Sum_probs=54.8
Q ss_pred CceeEEecCCCccCCCCCCCCCC---CHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC--CC-ceEEecCCEEEE
Q 044635 572 TTRAILLDYDGTLMPQASIDKSP---NSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC--EN-LGIAAEHGYFFR 645 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~---s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~--~~-~~liaenGa~i~ 645 (831)
..++|++|+||||++ ..+.+ ++.+.++|.+|.+ .|..++|+|+.+...+...++.+ .. ...|..+|....
T Consensus 127 ~~~~i~~D~D~TL~~---~~~~v~irdp~V~EtL~eLke-kGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~ 202 (303)
T PHA03398 127 IPHVIVFDLDSTLIT---DEEPVRIRDPFVYDSLDELKE-RGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAG 202 (303)
T ss_pred eccEEEEecCCCccC---CCCccccCChhHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCccc
Confidence 468999999999999 55555 7999999999987 69999999988888777777654 22 224555666554
Q ss_pred eC
Q 044635 646 LR 647 (831)
Q Consensus 646 ~~ 647 (831)
..
T Consensus 203 k~ 204 (303)
T PHA03398 203 EY 204 (303)
T ss_pred cc
Confidence 43
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0031 Score=72.24 Aligned_cols=118 Identities=13% Similarity=0.169 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHH
Q 044635 355 SLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYV 434 (831)
Q Consensus 355 ~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~ 434 (831)
...|+|++.+.++.|++. |=+ |.++ ++..++.++ .+ | ..++.+.+ +....+..+|.
T Consensus 291 s~~I~~i~~Lv~~lPd~~----f~I-ga~t--------e~s~kL~~L-~~----y-----~nvvly~~-~~~~~l~~ly~ 346 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYH----FHI-AALT--------EMSSKLMSL-DK----Y-----DNVKLYPN-ITTQKIQELYQ 346 (438)
T ss_pred HHHHHHHHHHHHhCCCcE----EEE-EecC--------cccHHHHHH-Hh----c-----CCcEEECC-cChHHHHHHHH
Confidence 899999999999999987 554 6443 112344444 22 2 35777665 44567999999
Q ss_pred HcCEeEECCCccCCCC---CCCCCceEEEe--cccccccccCCCceeCCCCHHHHHHHHHHHhcCCH
Q 044635 435 VAECCLVTAVRDGSEP---SSPKKSMLVVS--EFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMAD 496 (831)
Q Consensus 435 ~ADv~vvtS~~eGma~---~~~~~g~lVlS--e~~G~~~~l~~allVnP~d~~~~A~ai~~aL~m~~ 496 (831)
.||+++.+|..||+.. ++...|.+|+| ...|..+.+.++.+|++.|+++++++|.++|+.+.
T Consensus 347 ~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~g~l~~~~~~~~m~~~i~~lL~d~~ 413 (438)
T TIGR02919 347 TCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIASENIFEHNEVDQLISKLKDLLNDPN 413 (438)
T ss_pred hccEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccCCceecCCCHHHHHHHHHHHhcCHH
Confidence 9999999999999821 34556778877 44455556667999999999999999999998774
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0026 Score=66.09 Aligned_cols=63 Identities=10% Similarity=-0.025 Sum_probs=46.3
Q ss_pred CHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC-----CcccceEeCChhH
Q 044635 739 NKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK-----PSKAKYYLDDTVE 813 (831)
Q Consensus 739 nKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~-----~s~A~y~l~d~~e 813 (831)
.+....+.+++.+ |++++++++|||+.+|+++-+.+|.. .+.+.-+.. ...|.+++.+.++
T Consensus 149 p~~~~~~~~~~~~---~~~~~~~~~igDs~~Di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~~~~~~d 214 (222)
T PRK10826 149 PHPEVYLNCAAKL---GVDPLTCVALEDSFNGMIAAKAARMR-----------SIVVPAPEQQNDPRWALADVKLESLTE 214 (222)
T ss_pred CCHHHHHHHHHHc---CCCHHHeEEEcCChhhHHHHHHcCCE-----------EEEecCCccCchhhhhhhheeccCHHH
Confidence 3556888899988 99999999999999999999999852 133332321 1257777777777
Q ss_pred HH
Q 044635 814 IV 815 (831)
Q Consensus 814 V~ 815 (831)
+.
T Consensus 215 l~ 216 (222)
T PRK10826 215 LT 216 (222)
T ss_pred Hh
Confidence 54
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.015 Score=60.26 Aligned_cols=72 Identities=13% Similarity=0.139 Sum_probs=45.8
Q ss_pred CCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCCcccceEeCChhHHHH
Q 044635 737 GVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDTVEIVR 816 (831)
Q Consensus 737 gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~s~A~y~l~d~~eV~~ 816 (831)
|..|..+++.+. ..++.++++||+.||+.|.+.++..++...+- ..-.....+-+..++-.+|.+
T Consensus 142 g~~K~~~l~~~~-------~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~--------~~~~~~~~~~~~~~~f~di~~ 206 (214)
T TIGR03333 142 GCCKPSLIRKLS-------EPNDYHIVIGDSVTDVEAAKQSDLCFARDYLL--------NECEELGLNHAPFQDFYDVRK 206 (214)
T ss_pred CCCHHHHHHHHh-------hcCCcEEEEeCCHHHHHHHHhCCeeEehHHHH--------HHHHHcCCCccCcCCHHHHHH
Confidence 356888887663 24678999999999999999987543321100 000112223334578899998
Q ss_pred HHHHHHh
Q 044635 817 LMQGLAC 823 (831)
Q Consensus 817 ~L~~L~~ 823 (831)
.|++..+
T Consensus 207 ~l~~~~~ 213 (214)
T TIGR03333 207 ELENVKE 213 (214)
T ss_pred HHHHHhc
Confidence 8886543
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0062 Score=60.99 Aligned_cols=62 Identities=11% Similarity=0.049 Sum_probs=45.2
Q ss_pred HHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC-----CcccceEeCChhHHH
Q 044635 741 GLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK-----PSKAKYYLDDTVEIV 815 (831)
Q Consensus 741 G~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~-----~s~A~y~l~d~~eV~ 815 (831)
-..+...++++ |++++++++|||+.+|+..=+.+|.. .++.|.-|.. ...|++++++..++.
T Consensus 109 p~~~~~a~~~~---~~~~~~~v~VGDs~~Di~aA~~aG~~----------~~i~v~~g~~~~~~~~~~ad~~i~~~~el~ 175 (176)
T TIGR00213 109 PGMLLQARKEL---HIDMAQSYMVGDKLEDMQAGVAAKVK----------TNVLVRTGKPITPEAENIADWVLNSLADLP 175 (176)
T ss_pred HHHHHHHHHHc---CcChhhEEEEcCCHHHHHHHHHCCCc----------EEEEEecCCcccccccccCCEEeccHHHhh
Confidence 44556677776 89999999999999999999998752 1134555642 134888998888764
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0045 Score=73.61 Aligned_cols=65 Identities=9% Similarity=0.178 Sum_probs=52.0
Q ss_pred HHHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCC-CeEEEECCCCHhhHHHHhCCC
Q 044635 566 SAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKN-NMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 566 ~~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g-~~V~I~SGR~~~~l~~~~~~~ 631 (831)
..+.....+.+++..||+++..-.....+-+.+.++|+.|.+ .| ..++++||.+....+...+.+
T Consensus 357 ~~~~~~g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L~~-~g~i~v~ivTgd~~~~a~~i~~~l 422 (556)
T TIGR01525 357 NEGESQGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKR-AGGIKLVMLTGDNRSAAEAVAAEL 422 (556)
T ss_pred HHHhhCCcEEEEEEECCEEEEEEEecccchHhHHHHHHHHHH-cCCCeEEEEeCCCHHHHHHHHHHh
Confidence 345556678899999998886332356688999999999976 48 999999999999988888654
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.00068 Score=64.76 Aligned_cols=68 Identities=22% Similarity=0.241 Sum_probs=52.3
Q ss_pred CHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEeC---Ch
Q 044635 739 NKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLD---DT 811 (831)
Q Consensus 739 nKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~---d~ 811 (831)
+|-.+.+.|++++ ++.++++.++|||.||+++|+.+|.+ +++-++ .+.|.|++. ..
T Consensus 83 dK~~a~~~L~~~~---~l~~e~~ayiGDD~~Dlpvm~~vGls--------------~a~~dAh~~v~~~a~~Vt~~~GG~ 145 (170)
T COG1778 83 DKLAAFEELLKKL---NLDPEEVAYVGDDLVDLPVMEKVGLS--------------VAVADAHPLLKQRADYVTSKKGGE 145 (170)
T ss_pred hHHHHHHHHHHHh---CCCHHHhhhhcCccccHHHHHHcCCc--------------ccccccCHHHHHhhHhhhhccCcc
Confidence 6999999999998 99999999999999999999999965 333333 467888874 34
Q ss_pred hHHHHHHHHHHh
Q 044635 812 VEIVRLMQGLAC 823 (831)
Q Consensus 812 ~eV~~~L~~L~~ 823 (831)
..|.++.+-+..
T Consensus 146 GAvREv~dlil~ 157 (170)
T COG1778 146 GAVREVCDLILQ 157 (170)
T ss_pred hHHHHHHHHHHH
Confidence 455555554443
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0065 Score=75.76 Aligned_cols=138 Identities=20% Similarity=0.220 Sum_probs=96.4
Q ss_pred HHHHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEE
Q 044635 565 VSAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFF 644 (831)
Q Consensus 565 ~~~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i 644 (831)
...+.....+.+++-.||+++..-.....+-+.+.++|++|.+ .|..++++||.+....+...+.+. +-
T Consensus 622 ~~~~~~~g~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L~~-~gi~v~~~Tgd~~~~a~~ia~~lg---i~------- 690 (834)
T PRK10671 622 ITAQASQGATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHK-AGYRLVMLTGDNPTTANAIAKEAG---ID------- 690 (834)
T ss_pred HHHHHhCCCeEEEEEECCEEEEEEEccCcchhhHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcC---CC-------
Confidence 4445556678888888998774211344566888899999976 599999999999998888776431 10
Q ss_pred EeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEE
Q 044635 645 RLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTV 724 (831)
Q Consensus 645 ~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v 724 (831)
. .+.
T Consensus 691 ------~-----------------------------------------~~~----------------------------- 694 (834)
T PRK10671 691 ------E-----------------------------------------VIA----------------------------- 694 (834)
T ss_pred ------E-----------------------------------------EEe-----------------------------
Confidence 0 000
Q ss_pred EEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----
Q 044635 725 KSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK---- 800 (831)
Q Consensus 725 ~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~---- 800 (831)
++.|. .|..+++.+.. ..+.++++||+.||.+|++.++ ++|++|+.
T Consensus 695 -------~~~p~--~K~~~i~~l~~-------~~~~v~~vGDg~nD~~al~~Ag--------------vgia~g~g~~~a 744 (834)
T PRK10671 695 -------GVLPD--GKAEAIKRLQS-------QGRQVAMVGDGINDAPALAQAD--------------VGIAMGGGSDVA 744 (834)
T ss_pred -------CCCHH--HHHHHHHHHhh-------cCCEEEEEeCCHHHHHHHHhCC--------------eeEEecCCCHHH
Confidence 01122 36666666532 3567999999999999999997 57889875
Q ss_pred CcccceEe--CChhHHHHHHH
Q 044635 801 PSKAKYYL--DDTVEIVRLMQ 819 (831)
Q Consensus 801 ~s~A~y~l--~d~~eV~~~L~ 819 (831)
...|++.+ ++..++..+++
T Consensus 745 ~~~ad~vl~~~~~~~i~~~i~ 765 (834)
T PRK10671 745 IETAAITLMRHSLMGVADALA 765 (834)
T ss_pred HHhCCEEEecCCHHHHHHHHH
Confidence 34566765 67888888886
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0087 Score=63.50 Aligned_cols=70 Identities=13% Similarity=0.078 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC-----CcccceEeCChhH-
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK-----PSKAKYYLDDTVE- 813 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~-----~s~A~y~l~d~~e- 813 (831)
+.....+.++++ |.+++++++|||+.+|+..=+.+|.. .++|.-|.. ...|++++++..+
T Consensus 166 ~p~~~~~a~~~~---~~~~~~~l~vgDs~~Di~aA~~aGi~-----------~i~v~~g~~~~~l~~~~a~~vi~~~~e~ 231 (248)
T PLN02770 166 HPDPYLKALEVL---KVSKDHTFVFEDSVSGIKAGVAAGMP-----------VVGLTTRNPESLLMEAKPTFLIKDYEDP 231 (248)
T ss_pred ChHHHHHHHHHh---CCChhHEEEEcCCHHHHHHHHHCCCE-----------EEEEeCCCCHHHHhhcCCCEEeccchhh
Confidence 346677888887 89999999999999999999988742 345555532 3468899998887
Q ss_pred -HHHHHHHHHh
Q 044635 814 -IVRLMQGLAC 823 (831)
Q Consensus 814 -V~~~L~~L~~ 823 (831)
+...|+.+.+
T Consensus 232 ~~~~~~~~~~~ 242 (248)
T PLN02770 232 KLWAALEELDQ 242 (248)
T ss_pred HHHHHHhhccc
Confidence 4444444443
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0069 Score=65.71 Aligned_cols=61 Identities=11% Similarity=-0.039 Sum_probs=46.8
Q ss_pred HHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEeCChhHHH
Q 044635 741 GLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLDDTVEIV 815 (831)
Q Consensus 741 G~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~d~~eV~ 815 (831)
......+++.+ |.+++.+++|||+.+|+.+-+.+|.. +++|.-|.. -..|++++++..++.
T Consensus 205 p~~~~~a~~~~---~~~p~~~l~IGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~l~~ad~vi~~~~~l~ 269 (286)
T PLN02779 205 PDIYNLAAETL---GVDPSRCVVVEDSVIGLQAAKAAGMR-----------CIVTKSSYTADEDFSGADAVFDCLGDVP 269 (286)
T ss_pred HHHHHHHHHHh---CcChHHEEEEeCCHHhHHHHHHcCCE-----------EEEEccCCccccccCCCcEEECChhhcc
Confidence 55778888888 89999999999999999999999852 345544532 135888888877754
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0024 Score=60.52 Aligned_cols=55 Identities=20% Similarity=0.273 Sum_probs=42.2
Q ss_pred eeEEecCCCccCCCCC--CCC-------CCCHHHHHHHHHHhhcCCCeEEEECCC-CHhhHHHHhC
Q 044635 574 RAILLDYDGTLMPQAS--IDK-------SPNSKTIDILNSLCRDKNNMVFLVSAK-SRKTLAEWFS 629 (831)
Q Consensus 574 rli~~D~DGTLl~~~~--~~~-------~~s~~~~~~L~~L~~d~g~~V~I~SGR-~~~~l~~~~~ 629 (831)
|+|++|+||||++... ... .+-+.+.++|+.|.+ .|..++|+|++ ........++
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~-~g~~l~i~Sn~~~~~~~~~~l~ 65 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKK-NGFLLALASYNDDPHVAYELLK 65 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHH-CCeEEEEEeCCCCHHHHHHHHH
Confidence 6899999999998521 111 246799999999976 59999999999 6666666554
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0096 Score=61.68 Aligned_cols=65 Identities=14% Similarity=0.085 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHhhhcCCC-cccEEEEcCCchhHHHHHHcchhcCCCCCCCCCce-EEEEeCCC------CcccceEeCCh
Q 044635 740 KGLVAKRLLSTMQEREML-PDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEV-FACTVGRK------PSKAKYYLDDT 811 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~-~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~-~~v~vG~~------~s~A~y~l~d~ 811 (831)
+......+++++ |+. ++.+++|||+.+|+.+-+.+|.. . ++|.-|.. ...|.+++++.
T Consensus 147 ~p~~~~~a~~~~---~~~~~~~~~~igD~~~Di~aa~~aG~~-----------~~i~~~~g~~~~~~~~~~~~~~~i~~~ 212 (220)
T TIGR03351 147 APDLILRAMELT---GVQDVQSVAVAGDTPNDLEAGINAGAG-----------AVVGVLTGAHDAEELSRHPHTHVLDSV 212 (220)
T ss_pred CHHHHHHHHHHc---CCCChhHeEEeCCCHHHHHHHHHCCCC-----------eEEEEecCCCcHHHHhhcCCceeecCH
Confidence 567888888887 886 79999999999999999999853 2 34544432 24577888888
Q ss_pred hHHHHHH
Q 044635 812 VEIVRLM 818 (831)
Q Consensus 812 ~eV~~~L 818 (831)
.++..++
T Consensus 213 ~~l~~~~ 219 (220)
T TIGR03351 213 ADLPALL 219 (220)
T ss_pred HHHHHhh
Confidence 8876654
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0097 Score=71.40 Aligned_cols=141 Identities=11% Similarity=0.181 Sum_probs=100.8
Q ss_pred HHHHHHHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCC
Q 044635 562 EHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHG 641 (831)
Q Consensus 562 ~~~~~~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenG 641 (831)
+...+.+.+...+.+++-+|++++..-.....+-+++.+++++|.+ .|..++++||-.......+.+.+. +-
T Consensus 415 ~~~~~~~a~~G~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l~~-~Gi~v~miTGD~~~ta~~iA~~lG---I~---- 486 (675)
T TIGR01497 415 DQAVDQVARQGGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQLRK-MGIKTIMITGDNRLTAAAIAAEAG---VD---- 486 (675)
T ss_pred HHHHHHHHhCCCeEEEEEECCEEEEEEEecccchhHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcC---CC----
Confidence 3344556666678888888888875322455678999999999977 599999999999999988887652 10
Q ss_pred EEEEeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCC
Q 044635 642 YFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEP 721 (831)
Q Consensus 642 a~i~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~ 721 (831)
. + +
T Consensus 487 ---------~----------------------------------------v-~--------------------------- 489 (675)
T TIGR01497 487 ---------D----------------------------------------F-I--------------------------- 489 (675)
T ss_pred ---------E----------------------------------------E-E---------------------------
Confidence 0 0 0
Q ss_pred eEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC-
Q 044635 722 VTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK- 800 (831)
Q Consensus 722 v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~- 800 (831)
-++.|. +|...++.+.+. | ..|.++||+.||.++++.++ ++++||+.
T Consensus 490 ---------a~~~Pe--dK~~~v~~lq~~----g---~~VamvGDG~NDapAL~~Ad--------------vGiAm~~gt 537 (675)
T TIGR01497 490 ---------AEATPE--DKIALIRQEQAE----G---KLVAMTGDGTNDAPALAQAD--------------VGVAMNSGT 537 (675)
T ss_pred ---------cCCCHH--HHHHHHHHHHHc----C---CeEEEECCCcchHHHHHhCC--------------EeEEeCCCC
Confidence 012333 477777776543 2 35999999999999999997 68888864
Q ss_pred ---CcccceEe--CChhHHHHHHH
Q 044635 801 ---PSKAKYYL--DDTVEIVRLMQ 819 (831)
Q Consensus 801 ---~s~A~y~l--~d~~eV~~~L~ 819 (831)
+..|+.++ +|...+.+.++
T Consensus 538 ~~akeaadivLldd~~s~Iv~av~ 561 (675)
T TIGR01497 538 QAAKEAANMVDLDSDPTKLIEVVH 561 (675)
T ss_pred HHHHHhCCEEECCCCHHHHHHHHH
Confidence 46778876 45677766655
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0028 Score=65.58 Aligned_cols=44 Identities=18% Similarity=0.170 Sum_probs=39.1
Q ss_pred EEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 733 VKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 733 V~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
..-.+-.|..+++.+++.+ |++++.++++|||.||.+||+.+++
T Consensus 138 ~~~~~~~K~~~l~~~~~~~---g~~~~~~~a~gDs~nDlpml~~ag~ 181 (212)
T COG0560 138 PICDGEGKAKALRELAAEL---GIPLEETVAYGDSANDLPMLEAAGL 181 (212)
T ss_pred eecCcchHHHHHHHHHHHc---CCCHHHeEEEcCchhhHHHHHhCCC
Confidence 3344567999999999988 9999999999999999999999985
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0048 Score=64.76 Aligned_cols=73 Identities=14% Similarity=0.231 Sum_probs=51.2
Q ss_pred cccCCHHHHHHHHHhcCceeEEecCCCccCCCCC---CCCC-CCH---------------------------HHHHHHHH
Q 044635 556 FKKLSMEHIVSAYKRTTTRAILLDYDGTLMPQAS---IDKS-PNS---------------------------KTIDILNS 604 (831)
Q Consensus 556 f~~l~~~~~~~~y~~s~~rli~~D~DGTLl~~~~---~~~~-~s~---------------------------~~~~~L~~ 604 (831)
..=.++++|.+.....+.-.|+||+||||++... .... +++ .+.++|+.
T Consensus 46 ~~~~~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~ 125 (237)
T TIGR01672 46 IHWISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDM 125 (237)
T ss_pred eeEEEHHHHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHH
Confidence 3347889999998877777999999999998543 1111 122 27788888
Q ss_pred HhhcCCCeEEEECCCC----HhhHHHHhC
Q 044635 605 LCRDKNNMVFLVSAKS----RKTLAEWFS 629 (831)
Q Consensus 605 L~~d~g~~V~I~SGR~----~~~l~~~~~ 629 (831)
+.+ .|..++|+|+|. ...++.+++
T Consensus 126 l~~-~G~~i~iVTnr~~~k~~~~a~~ll~ 153 (237)
T TIGR01672 126 HQR-RGDAIFFVTGRTPGKTDTVSKTLAK 153 (237)
T ss_pred HHH-CCCEEEEEeCCCCCcCHHHHHHHHH
Confidence 876 599999999993 334444443
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0027 Score=60.22 Aligned_cols=56 Identities=23% Similarity=0.324 Sum_probs=42.8
Q ss_pred eeEEecCCCccCCCCC-----CCCCCCHHHHHHHHHHhhcCCCeEEEECCCC--------HhhHHHHhCC
Q 044635 574 RAILLDYDGTLMPQAS-----IDKSPNSKTIDILNSLCRDKNNMVFLVSAKS--------RKTLAEWFSP 630 (831)
Q Consensus 574 rli~~D~DGTLl~~~~-----~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~--------~~~l~~~~~~ 630 (831)
|++++|+||||++... ....+.+.+.++|+.|.+ .|..++|+|+++ ...+..++..
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~-~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~ 69 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKE-AGYKVVIVTNQSGIGRGKFSSGRVARRLEE 69 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHH-CCCEEEEEECCccccccHHHHHHHHHHHHH
Confidence 6899999999996210 123567899999999976 599999999998 5556666553
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0094 Score=70.52 Aligned_cols=61 Identities=11% Similarity=0.157 Sum_probs=46.8
Q ss_pred hcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCC-eEEEECCCCHhhHHHHhCCC
Q 044635 570 RTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNN-MVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 570 ~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~-~V~I~SGR~~~~l~~~~~~~ 631 (831)
....+.++.-.||++...-.....+-+.+.++|++|.+ .|. .++++||.+....+...+.+
T Consensus 339 ~~~~~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L~~-~Gi~~v~vvTgd~~~~a~~i~~~l 400 (536)
T TIGR01512 339 SAGKTIVHVARDGTYLGYILLSDEPRPDAAEAIAELKA-LGIEKVVMLTGDRRAVAERVAREL 400 (536)
T ss_pred hCCCeEEEEEECCEEEEEEEEeccchHHHHHHHHHHHH-cCCCcEEEEcCCCHHHHHHHHHHc
Confidence 34456667777888775322345677999999999977 588 99999999999998888754
|
. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.019 Score=56.66 Aligned_cols=37 Identities=16% Similarity=0.075 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
|-..++.+++.+ +++++++++|||+.+|+++-+.+|.
T Consensus 105 ~~~~~~~~~~~~---~~~~~e~l~IGD~~~Di~~A~~aGi 141 (161)
T TIGR01261 105 KIKLLEPYLKKN---LIDKARSYVIGDRETDMQLAENLGI 141 (161)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEeCCHHHHHHHHHCCC
Confidence 456677777777 8899999999999999999998875
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.37 Score=51.45 Aligned_cols=54 Identities=24% Similarity=0.350 Sum_probs=41.1
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEE---CCCCHhhHHHHhCC
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLV---SAKSRKTLAEWFSP 630 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~---SGR~~~~l~~~~~~ 630 (831)
+.+.+++|+||||.. ...+-|...++|++|.+ .|..++++ |.|+++.+.+.+..
T Consensus 7 ~y~~~l~DlDGvl~~----G~~~ipga~e~l~~L~~-~g~~~iflTNn~~~s~~~~~~~L~~ 63 (269)
T COG0647 7 KYDGFLFDLDGVLYR----GNEAIPGAAEALKRLKA-AGKPVIFLTNNSTRSREVVAARLSS 63 (269)
T ss_pred hcCEEEEcCcCceEe----CCccCchHHHHHHHHHH-cCCeEEEEeCCCCCCHHHHHHHHHh
Confidence 457899999999997 55667999999999987 58888887 45556645554443
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.034 Score=61.37 Aligned_cols=57 Identities=16% Similarity=0.230 Sum_probs=44.3
Q ss_pred CceeEEecCCCccCCCCCCC--------CCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhC
Q 044635 572 TTRAILLDYDGTLMPQASID--------KSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFS 629 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~--------~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~ 629 (831)
.+|+|++|+|+||....-.+ ..+-+.+.++|++|.+ .|..++|||..+...+...+.
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~-~Gi~lai~S~n~~~~a~~~l~ 66 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKK-QGFLLALASKNDEDDAKKVFE 66 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHh-CCCEEEEEcCCCHHHHHHHHH
Confidence 47899999999999742101 1234789999999976 699999999998888877775
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.022 Score=67.76 Aligned_cols=61 Identities=13% Similarity=0.243 Sum_probs=48.9
Q ss_pred hcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 570 RTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 570 ~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
+...+.+.++.||+++..-.....+-+.+.++|++|.+ .|..++++||.+....+...+.+
T Consensus 382 ~~g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~-~Gi~v~ilSgd~~~~a~~ia~~l 442 (562)
T TIGR01511 382 EQGSTSVLVAVNGELAGVFALEDQLRPEAKEVIQALKR-RGIEPVMLTGDNRKTAKAVAKEL 442 (562)
T ss_pred hCCCEEEEEEECCEEEEEEEecccccHHHHHHHHHHHH-cCCeEEEEcCCCHHHHHHHHHHc
Confidence 44568899999999876322355678999999999977 59999999999999888887654
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.0078 Score=59.78 Aligned_cols=49 Identities=18% Similarity=0.199 Sum_probs=36.8
Q ss_pred CceeEEecCCCccCCCCCCCCC---------CCHHHHHHHHHHhhcCCCeEEEECCCCH
Q 044635 572 TTRAILLDYDGTLMPQASIDKS---------PNSKTIDILNSLCRDKNNMVFLVSAKSR 621 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~---------~s~~~~~~L~~L~~d~g~~V~I~SGR~~ 621 (831)
+.|++++|+||||+...+.... +-+.+.++|++|.+ .|..++|+|..+.
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~-~G~~l~I~TN~~~ 69 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDD-EGYKIVIFTNQSG 69 (166)
T ss_pred cCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHH-CCCEEEEEeCCcc
Confidence 5689999999999974321111 23778999999976 5999999996554
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.031 Score=68.61 Aligned_cols=66 Identities=5% Similarity=0.086 Sum_probs=52.1
Q ss_pred HHHHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 565 VSAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 565 ~~~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
.+.+.....+.+++=+||+++..-....++-+++.++|++|.+ .|..++++||.+......+.+.+
T Consensus 540 ~~~~~~~g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~-~gi~~~llTGd~~~~a~~ia~~l 605 (741)
T PRK11033 540 INELESAGKTVVLVLRNDDVLGLIALQDTLRADARQAISELKA-LGIKGVMLTGDNPRAAAAIAGEL 605 (741)
T ss_pred HHHHHhCCCEEEEEEECCEEEEEEEEecCCchhHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHc
Confidence 3456666778888888998875222345678999999999977 59999999999999999888754
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.054 Score=68.02 Aligned_cols=165 Identities=17% Similarity=0.293 Sum_probs=102.3
Q ss_pred HHHHHhcCceeEEecCCC-----ccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEec
Q 044635 565 VSAYKRTTTRAILLDYDG-----TLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAE 639 (831)
Q Consensus 565 ~~~y~~s~~rli~~D~DG-----TLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liae 639 (831)
.+.|.+...|.+++=+++ |++..-.....+-+++.+++++|.+ .|..++++||-+........+.+ ++...
T Consensus 495 ~~~~a~~G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l~~-~Gi~v~miTGD~~~tA~~ia~~~---Gi~~~ 570 (884)
T TIGR01522 495 AAEMASAGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTLIT-GGVRIIMITGDSQETAVSIARRL---GMPSK 570 (884)
T ss_pred HHHHHhcCCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHc---CCCCC
Confidence 344555667888887765 4443222455678999999999976 59999999999999999888754 33222
Q ss_pred CCEEEEeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcC
Q 044635 640 HGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLAN 719 (831)
Q Consensus 640 nGa~i~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~ 719 (831)
++..+ . |..++. .+ .++ +.+.+.+
T Consensus 571 ~~~~v------------~----------------------g~~l~~-----------~~-------~~~----l~~~~~~ 594 (884)
T TIGR01522 571 TSQSV------------S----------------------GEKLDA-----------MD-------DQQ----LSQIVPK 594 (884)
T ss_pred CCcee------------E----------------------hHHhHh-----------CC-------HHH----HHHHhhc
Confidence 11110 0 000000 00 011 2222222
Q ss_pred CCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCC
Q 044635 720 EPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGR 799 (831)
Q Consensus 720 ~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~ 799 (831)
. .+ +-.+.| -.|...++.+-+. | ..|+++||+.||.+|++.|+ ++|++|.
T Consensus 595 ~--~V-----far~~P--~~K~~iv~~lq~~----g---~~v~mvGDGvND~pAl~~Ad--------------VGia~g~ 644 (884)
T TIGR01522 595 V--AV-----FARASP--EHKMKIVKALQKR----G---DVVAMTGDGVNDAPALKLAD--------------IGVAMGQ 644 (884)
T ss_pred C--eE-----EEECCH--HHHHHHHHHHHHC----C---CEEEEECCCcccHHHHHhCC--------------eeEecCC
Confidence 1 11 112333 3577776665432 3 57999999999999999997 6888884
Q ss_pred C-----CcccceEe--CChhHHHHHHH
Q 044635 800 K-----PSKAKYYL--DDTVEIVRLMQ 819 (831)
Q Consensus 800 ~-----~s~A~y~l--~d~~eV~~~L~ 819 (831)
. +..|++++ ++...+.++++
T Consensus 645 ~g~~va~~aaDivl~dd~~~~i~~~i~ 671 (884)
T TIGR01522 645 TGTDVAKEAADMILTDDDFATILSAIE 671 (884)
T ss_pred CcCHHHHHhcCEEEcCCCHHHHHHHHH
Confidence 2 35789988 56788777665
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.025 Score=49.84 Aligned_cols=66 Identities=18% Similarity=0.179 Sum_probs=48.2
Q ss_pred CceEEEeccc-ccccccC---CCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhc-cCCHHHHHHHHH
Q 044635 455 KSMLVVSEFI-GCSPSLS---GAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVS-THDVGYWARSFL 523 (831)
Q Consensus 455 ~g~lVlSe~~-G~~~~l~---~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l 523 (831)
+|.+|+++.. +....+. .++.++ |+++++++|..+|+ .+++++...++.+++|. .|++.+-+++++
T Consensus 21 ~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~-~~~~~~~ia~~a~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 21 CGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLE-NPEERRRIAKNARERVLKRHTWEHRAEQIL 91 (92)
T ss_pred CCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 3556666544 5555562 367777 99999999999998 45677777777888886 788777777665
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.027 Score=65.40 Aligned_cols=66 Identities=20% Similarity=0.195 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEeCChhHHH
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLDDTVEIV 815 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~d~~eV~ 815 (831)
|-..+...++.+ +++++++|||+.+|+.+-+.+|.. .++|.-|.. ...|+|.+++..++.
T Consensus 387 kP~~~~~al~~l-----~~~~~v~VGDs~~Di~aAk~AG~~-----------~I~v~~~~~~~~~~~~~d~~i~~l~el~ 450 (459)
T PRK06698 387 KSDLVKSILNKY-----DIKEAAVVGDRLSDINAAKDNGLI-----------AIGCNFDFAQEDELAQADIVIDDLLELK 450 (459)
T ss_pred CcHHHHHHHHhc-----CcceEEEEeCCHHHHHHHHHCCCe-----------EEEEeCCCCcccccCCCCEEeCCHHHHH
Confidence 445666666654 468899999999999999999852 234444432 246889999999998
Q ss_pred HHHHHH
Q 044635 816 RLMQGL 821 (831)
Q Consensus 816 ~~L~~L 821 (831)
++|..+
T Consensus 451 ~~l~~~ 456 (459)
T PRK06698 451 GILSTV 456 (459)
T ss_pred HHHHHH
Confidence 877543
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.033 Score=54.15 Aligned_cols=60 Identities=22% Similarity=0.231 Sum_probs=53.1
Q ss_pred HhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 569 KRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 569 ~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
++...|-+++|+|.||++. .+...+|++++-+..+.. .|..++|+|--+...+..+...+
T Consensus 24 ~~~Gikgvi~DlDNTLv~w--d~~~~tpe~~~W~~e~k~-~gi~v~vvSNn~e~RV~~~~~~l 83 (175)
T COG2179 24 KAHGIKGVILDLDNTLVPW--DNPDATPELRAWLAELKE-AGIKVVVVSNNKESRVARAAEKL 83 (175)
T ss_pred HHcCCcEEEEeccCceecc--cCCCCCHHHHHHHHHHHh-cCCEEEEEeCCCHHHHHhhhhhc
Confidence 4568999999999999997 566789999999999977 59999999999999999888765
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.047 Score=63.38 Aligned_cols=35 Identities=14% Similarity=0.161 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCC
Q 044635 595 NSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSP 630 (831)
Q Consensus 595 s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 630 (831)
.+++.+.|+++.+ .|..++|+||.+...++...+.
T Consensus 74 ~pga~e~L~~lk~-~G~~v~LaTas~~~~a~~i~~~ 108 (479)
T PRK08238 74 NEEVLDYLRAERA-AGRKLVLATASDERLAQAVAAH 108 (479)
T ss_pred ChhHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHH
Confidence 3677788887765 5788888888888777766654
|
|
| >PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.57 Score=51.54 Aligned_cols=204 Identities=23% Similarity=0.294 Sum_probs=114.9
Q ss_pred Ccccc----cCCHHHHHHHHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHh
Q 044635 553 DPNFK----KLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWF 628 (831)
Q Consensus 553 ~~~f~----~l~~~~~~~~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~ 628 (831)
.|+|. -||+.+|..--+..+-+|+-||=|+||.+.+. .-.++..++.-|-+|-+ .|..|.|+|.=++....++.
T Consensus 123 ~PSFNDvR~ILN~AQi~al~~~~~L~LvTFDgDvTLY~DG~-sl~~d~pvi~~ii~LL~-~gv~VgIVTAAGY~~a~kY~ 200 (408)
T PF06437_consen 123 PPSFNDVRHILNTAQIMALAKNYGLKLVTFDGDVTLYEDGA-SLEPDNPVIPRIIKLLR-RGVKVGIVTAAGYPGAEKYE 200 (408)
T ss_pred CCCHHHHHHHHHHHHHHHhcccCCceEEEEcCCcccccCCC-CCCCCchHHHHHHHHHh-cCCeEEEEeCCCCCChHHHH
Confidence 45554 36667766665556889999999999998431 22235556665656655 49999999988776544433
Q ss_pred CC-------------C-----CCce-EEecCCEEEEeCCC----------ceEEEcCCcCCccHHH-HHHHHHHH-----
Q 044635 629 SP-------------C-----ENLG-IAAEHGYFFRLRRD----------EEWETCIPVADCGWKQ-IAEPVMKL----- 673 (831)
Q Consensus 629 ~~-------------~-----~~~~-liaenGa~i~~~~~----------~~w~~~~~~~~~~w~~-~v~~il~~----- 673 (831)
.. + .++. +-+|.-+..+.... .+|.. +.-..|.+ .+..+|+.
T Consensus 201 ~RL~GLL~a~~~~~~Lt~~qk~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~---~~m~~W~~~dI~~lLD~AE~~L 277 (408)
T PF06437_consen 201 ERLHGLLDAFKDSTDLTPEQKSNLYVMGGESNYLFRYDPESPHGLEFVPREEWLL---PEMKTWSEEDITELLDIAEAAL 277 (408)
T ss_pred HHHHHHHHHHHhccCCCHHHhcCEEEecccceeEEEecCCCCCCeEEccHHhccC---ccccCcCHHHHHHHHHHHHHHH
Confidence 21 2 1222 23344444444332 23431 11134543 45555542
Q ss_pred --Hhc--cCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcC------CCeEEEEcC--eEEEEEeCCCCHH
Q 044635 674 --YTE--TTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLAN------EPVTVKSGQ--NLVEVKPQGVNKG 741 (831)
Q Consensus 674 --~~e--~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~------~~v~v~~g~--~~vEV~p~gvnKG 741 (831)
..+ +.| ..|-.|+-++-..- .....+...+.+|+.-.++..+.. .++....|. -+||| -+|.
T Consensus 278 ~~~~~~l~Lp-a~IiRK~RAVGivP-~~~~ki~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGsDVwVDI----GdKs 351 (408)
T PF06437_consen 278 RDCVKRLNLP-ATIIRKERAVGIVP-KPGVKIIREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGSDVWVDI----GDKS 351 (408)
T ss_pred HHHHHHcCCC-eeEEeecceeeEec-CCCCcchhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCcceEEEc----CCcH
Confidence 222 344 44555555543322 222223445666666555544432 344444443 45665 3799
Q ss_pred HHHHHHHHHhh-hcCCCcccEEEEcCC
Q 044635 742 LVAKRLLSTMQ-EREMLPDFVLCVGDD 767 (831)
Q Consensus 742 ~al~~Ll~~l~-~~g~~~d~vla~GD~ 767 (831)
.+++.+.+++. ..++.+.+++-+||-
T Consensus 352 ~GV~~lQ~y~~~~~~i~~~~tLHVGDQ 378 (408)
T PF06437_consen 352 LGVRALQKYFDPEGGIKPSETLHVGDQ 378 (408)
T ss_pred HhHHHHHHHHHhccCCCccceeeehhh
Confidence 99988877762 137899999999994
|
; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.084 Score=67.11 Aligned_cols=40 Identities=13% Similarity=0.056 Sum_probs=34.5
Q ss_pred CCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 591 DKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 591 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
...|-+++.++++++.+ .|+.|+++|||+...+..+.+.+
T Consensus 566 ~Dplr~~v~~aI~~l~~-~Gi~v~~~TGd~~~ta~~ia~~~ 605 (997)
T TIGR01106 566 IDPPRAAVPDAVGKCRS-AGIKVIMVTGDHPITAKAIAKGV 605 (997)
T ss_pred cCCChHHHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHc
Confidence 34567899999999977 59999999999999998888754
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.01 Score=56.96 Aligned_cols=62 Identities=15% Similarity=0.190 Sum_probs=42.5
Q ss_pred HhcCceeEEecCCCccCCCCC---CC----CCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 569 KRTTTRAILLDYDGTLMPQAS---ID----KSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 569 ~~s~~rli~~D~DGTLl~~~~---~~----~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
+.+++||+++|+||||++-.- .+ +...-.-=..++.|.+ .|+++.|+|||.-..+++..+.+
T Consensus 4 ra~~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv~DG~Gik~l~~-~Gi~vAIITGr~s~ive~Ra~~L 72 (170)
T COG1778 4 RAKNIKLLILDVDGVLTDGKLYYDENGEEIKAFNVRDGHGIKLLLK-SGIKVAIITGRDSPIVEKRAKDL 72 (170)
T ss_pred hhhhceEEEEeccceeecCeEEEcCCCceeeeeeccCcHHHHHHHH-cCCeEEEEeCCCCHHHHHHHHHc
Confidence 346789999999999998210 11 1111111233444544 49999999999999999998765
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.13 Score=52.12 Aligned_cols=90 Identities=21% Similarity=0.287 Sum_probs=57.7
Q ss_pred eEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhH-HHHHHcchhcCCCCCCCCCceEEEEe--CCCCc--c
Q 044635 729 NLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDE-DMFEVIISSMAGPSIAPRAEVFACTV--GRKPS--K 803 (831)
Q Consensus 729 ~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe-~Mf~~a~~~~~~~~~~~~~~~~~v~v--G~~~s--~ 803 (831)
+.-..-|++.-||..+..+.......|+..+.++++||+.||. +|++..+.-++++. +.|.+.= ...|. +
T Consensus 153 hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampR-----kgfpl~k~~~~~p~~~k 227 (256)
T KOG3120|consen 153 HSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPR-----KGFPLWKLISANPMLLK 227 (256)
T ss_pred CccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceeccc-----CCCchHhhhhcCcceee
Confidence 3444578899999999999887767799999999999999998 55555544444432 0121110 00121 2
Q ss_pred cceEe-CChhHHHHHHHHHHh
Q 044635 804 AKYYL-DDTVEIVRLMQGLAC 823 (831)
Q Consensus 804 A~y~l-~d~~eV~~~L~~L~~ 823 (831)
|.-.. .+-.++...|..+.+
T Consensus 228 asV~~W~sg~d~~~~L~~lik 248 (256)
T KOG3120|consen 228 ASVLEWSSGEDLERILQQLIK 248 (256)
T ss_pred eeEEecccHHHHHHHHHHHHH
Confidence 22222 467777777777654
|
|
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.33 Score=52.60 Aligned_cols=160 Identities=14% Similarity=0.141 Sum_probs=104.6
Q ss_pred CcEEEEeccCcccccCHHHHHHHHHHHHHh-------CCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCC
Q 044635 338 GKVMLLGVDDMDIFKGISLKLLAMEQLLIQ-------HPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFG 410 (831)
Q Consensus 338 ~~~iil~VdRld~~KGi~~~l~A~~~lL~~-------~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g 410 (831)
..+++++--.-.+-..+.-++.|+..+-++ .|. + |.+|+ |.||..+.|.++|++.
T Consensus 254 ~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~----l-lciIT----GKGPlkE~Y~~~I~~~--------- 315 (444)
T KOG2941|consen 254 RPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPS----L-LCIIT----GKGPLKEKYSQEIHEK--------- 315 (444)
T ss_pred CCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCc----E-EEEEc----CCCchhHHHHHHHHHh---------
Confidence 457888888889999999999999854221 232 3 33343 3778878888888775
Q ss_pred CCCCccEEEecCCCCHHHHHHHHHHcCEe--EECCCccCCCC-----CCCCCceEEEeccccccccc----CCCceeCCC
Q 044635 411 KPGYDPVVLIDEPLKFYERIAYYVVAECC--LVTAVRDGSEP-----SSPKKSMLVVSEFIGCSPSL----SGAIRVNPW 479 (831)
Q Consensus 411 ~~~~~pv~~~~~~v~~~el~aly~~ADv~--vvtS~~eGma~-----~~~~~g~lVlSe~~G~~~~l----~~allVnP~ 479 (831)
+|+.|.+.+--++-++.+.++..||.. +-||.. |+.. ..-.+|.+|++=.--|-.+| .+|++++
T Consensus 316 --~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSSS-GLDLPMKVVDMFGcglPvcA~~fkcl~ELVkh~eNGlvF~-- 390 (444)
T KOG2941|consen 316 --NLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSSS-GLDLPMKVVDMFGCGLPVCAVNFKCLDELVKHGENGLVFE-- 390 (444)
T ss_pred --cccceeeeecccccccchhHhhccccceEeeecCc-ccCcchhHHHhhcCCCceeeecchhHHHHHhcCCCceEec--
Confidence 677888888778999999999999984 445542 4310 11122544444333566666 5899996
Q ss_pred CHHHHHHHHHHHhcC---CHHHHHHHHHHHhhhhccCCHHHHHHHHHH
Q 044635 480 NIDAVSDAMDSALEM---ADQEKQLRHEKHYRYVSTHDVGYWARSFLQ 524 (831)
Q Consensus 480 d~~~~A~ai~~aL~m---~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 524 (831)
|.+++|+.|..+.+. +..+-. +.++.+.+..-.+|..+.-+
T Consensus 391 Ds~eLa~ql~~lf~~fp~~a~~l~----~lkkn~~e~~e~RW~~~W~~ 434 (444)
T KOG2941|consen 391 DSEELAEQLQMLFKNFPDNADELN----QLKKNLREEQELRWDESWER 434 (444)
T ss_pred cHHHHHHHHHHHHhcCCCCHHHHH----HHHHhhHHHHhhhHHHHHHH
Confidence 799999999998872 222221 23333444455677665433
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.1 Score=65.96 Aligned_cols=138 Identities=17% Similarity=0.207 Sum_probs=88.9
Q ss_pred CCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCceEEEcCCcCCccHHHHHHHH
Q 044635 591 DKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPV 670 (831)
Q Consensus 591 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i 670 (831)
...+-+++.+++++|.+ .|..++++||-.........+.+ ++..+++..+ .. +.+
T Consensus 577 ~Dplr~~~~~aI~~l~~-aGI~v~miTGD~~~tA~~iA~~~---GI~~~~~~vi------------~G------~~~--- 631 (941)
T TIGR01517 577 KDPLRPGVREAVQECQR-AGITVRMVTGDNIDTAKAIARNC---GILTFGGLAM------------EG------KEF--- 631 (941)
T ss_pred cCCCchhHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHc---CCCCCCceEe------------eH------HHh---
Confidence 44677899999999977 59999999999999998887754 3332222100 00 000
Q ss_pred HHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHH
Q 044635 671 MKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLST 750 (831)
Q Consensus 671 l~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~ 750 (831)
+ +. . .+++.+.+.+. . -+-.+.|. .|...++.+.+.
T Consensus 632 -~-----------------------~l----~-------~~el~~~i~~~--~-----Vfar~sPe--~K~~iV~~lq~~ 667 (941)
T TIGR01517 632 -R-----------------------RL----V-------YEEMDPILPKL--R-----VLARSSPL--DKQLLVLMLKDM 667 (941)
T ss_pred -h-----------------------hC----C-------HHHHHHHhccC--e-----EEEECCHH--HHHHHHHHHHHC
Confidence 0 00 0 01122222221 1 22345565 499988887653
Q ss_pred hhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeC-CC----CcccceEeC--ChhHHHHHH
Q 044635 751 MQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVG-RK----PSKAKYYLD--DTVEIVRLM 818 (831)
Q Consensus 751 l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG-~~----~s~A~y~l~--d~~eV~~~L 818 (831)
| ..|.++||+.||.+|++.|+ +|++|| +. +..|++++- +-..+.+++
T Consensus 668 ----g---~vVam~GDGvNDapALk~Ad--------------VGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i 721 (941)
T TIGR01517 668 ----G---EVVAVTGDGTNDAPALKLAD--------------VGFSMGISGTEVAKEASDIILLDDNFASIVRAV 721 (941)
T ss_pred ----C---CEEEEECCCCchHHHHHhCC--------------cceecCCCccHHHHHhCCEEEecCCHHHHHHHH
Confidence 3 36999999999999999997 688888 32 567888874 566666665
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.095 Score=63.20 Aligned_cols=139 Identities=9% Similarity=0.162 Sum_probs=98.3
Q ss_pred HHHHHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEE
Q 044635 564 IVSAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYF 643 (831)
Q Consensus 564 ~~~~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~ 643 (831)
..+.+.+...+.+++-.|++++..-.....+-+++.+++++|++ .|..++++||=+......+.+++. +-
T Consensus 416 ~~~~~a~~G~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~Lr~-~GI~vvMiTGDn~~TA~aIA~elG---Id------ 485 (679)
T PRK01122 416 AVDEVARKGGTPLVVAEDNRVLGVIYLKDIVKPGIKERFAELRK-MGIKTVMITGDNPLTAAAIAAEAG---VD------ 485 (679)
T ss_pred HHHHHHhCCCcEEEEEECCeEEEEEEEeccCchhHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHcC---Cc------
Confidence 34455556667787778888875322345678999999999977 599999999999999988887642 20
Q ss_pred EEeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeE
Q 044635 644 FRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVT 723 (831)
Q Consensus 644 i~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~ 723 (831)
. + +
T Consensus 486 -------~----------------------------------------v-~----------------------------- 488 (679)
T PRK01122 486 -------D----------------------------------------F-L----------------------------- 488 (679)
T ss_pred -------E----------------------------------------E-E-----------------------------
Confidence 0 0 1
Q ss_pred EEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC---
Q 044635 724 VKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK--- 800 (831)
Q Consensus 724 v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~--- 800 (831)
=++.|. +|-..++.+.+. | .-|.++||+.||-++++.++ ++++||+.
T Consensus 489 -------A~~~Pe--dK~~iV~~lQ~~----G---~~VaMtGDGvNDAPALa~AD--------------VGIAMgsGTdv 538 (679)
T PRK01122 489 -------AEATPE--DKLALIRQEQAE----G---RLVAMTGDGTNDAPALAQAD--------------VGVAMNSGTQA 538 (679)
T ss_pred -------ccCCHH--HHHHHHHHHHHc----C---CeEEEECCCcchHHHHHhCC--------------EeEEeCCCCHH
Confidence 112222 266666665443 3 35899999999999999997 78999865
Q ss_pred -CcccceEe--CChhHHHHHHH
Q 044635 801 -PSKAKYYL--DDTVEIVRLMQ 819 (831)
Q Consensus 801 -~s~A~y~l--~d~~eV~~~L~ 819 (831)
+..|+-++ +|...+.+.++
T Consensus 539 AkeAADiVLldd~~s~Iv~av~ 560 (679)
T PRK01122 539 AKEAGNMVDLDSNPTKLIEVVE 560 (679)
T ss_pred HHHhCCEEEeCCCHHHHHHHHH
Confidence 56777776 45777776665
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.092 Score=59.42 Aligned_cols=62 Identities=13% Similarity=0.026 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEeCChhHHH
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLDDTVEIV 815 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~d~~eV~ 815 (831)
+.......++.+ |++++++++|||+.+|+..-+.+|.. +++|+-|.. .+.|++.+++..++.
T Consensus 152 ~p~~~~~a~~~l---gv~p~~~l~VGDs~~Di~aA~~aGi~-----------~I~v~~g~~~~~~~~~ad~~i~sl~el~ 217 (382)
T PLN02940 152 SPDIFLEAAKRL---NVEPSNCLVIEDSLPGVMAGKAAGME-----------VIAVPSIPKQTHLYSSADEVINSLLDLQ 217 (382)
T ss_pred CHHHHHHHHHHc---CCChhHEEEEeCCHHHHHHHHHcCCE-----------EEEECCCCcchhhccCccEEeCCHhHcC
Confidence 456778888887 89999999999999999999988752 244443432 246777788777653
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.14 Score=61.74 Aligned_cols=70 Identities=7% Similarity=0.104 Sum_probs=50.9
Q ss_pred HHHHHHHHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 561 MEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 561 ~~~~~~~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
.+...+.+.+...+.++.-.|++++..-.....+-+++.+++++|++ .|..++++||-+......+.+++
T Consensus 409 ~~~~~~~~a~~G~~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~-~GI~vvMiTGDn~~TA~aIA~el 478 (673)
T PRK14010 409 LDALVKGVSKKGGTPLVVLEDNEILGVIYLKDVIKDGLVERFRELRE-MGIETVMCTGDNELTAATIAKEA 478 (673)
T ss_pred HHHHHHHHHhCCCeEEEEEECCEEEEEEEeecCCcHHHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHc
Confidence 34444555555556655545777764222345678999999999976 59999999999999998888765
|
|
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.075 Score=56.29 Aligned_cols=85 Identities=25% Similarity=0.503 Sum_probs=59.2
Q ss_pred HHHHHHHHHcCC---CCCEEEEeCccccchHHHHHhhcC------CCeEEEEEecc-----CCChHHhh--cCCCh----
Q 044635 189 IFADRIMEVINP---EDDFVWVHDYHLMVLPTFLRKRFN------RVKLGFFLHSP-----FPSSEIYK--TLPIR---- 248 (831)
Q Consensus 189 ~fa~~i~~~~~~---~~d~vwvhDyhL~llp~~lr~~~~------~~~i~~flH~P-----fP~~e~f~--~lp~r---- 248 (831)
.|+.++++.++. .-|+|.+||+|-.++|.+|+.... ++|+.|.+|-. ||. +.+. -+|+.
T Consensus 118 ~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~-~~~~~~gl~~~~~~~ 196 (245)
T PF08323_consen 118 FFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPP-EDLKALGLPDEYFQN 196 (245)
T ss_dssp HHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEG-GGGGCTT-GGGGS-S
T ss_pred HHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCH-HHHHHcCCCHHHhcc
Confidence 555555555432 349999999999999999998764 69999999952 222 1111 12311
Q ss_pred ----------HHHHHHHhcCCeEeecCHHhHHHHHH
Q 044635 249 ----------EEILRALLNSDLIGFHTFDYARHFLS 274 (831)
Q Consensus 249 ----------~eil~~ll~~dligf~t~~~~~~Fl~ 274 (831)
.-+--|+..||.|..-++.|++.-++
T Consensus 197 ~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 197 LDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp TTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTS
T ss_pred ccccccccccCHHHHHHHhcCEeeeCCHHHHHHHhC
Confidence 25668899999999999999987654
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.033 Score=56.50 Aligned_cols=39 Identities=33% Similarity=0.367 Sum_probs=35.7
Q ss_pred CCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 738 VNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 738 vnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
-+|+.+++.+++.+ |+++++++++||+.+|++|++.++.
T Consensus 146 ~~k~~~~~~~~~~~---~~~~~~~i~iGDs~~D~~~a~~ag~ 184 (201)
T TIGR01491 146 DNKGEAVERLKREL---NPSLTETVAVGDSKNDLPMFEVADI 184 (201)
T ss_pred ccHHHHHHHHHHHh---CCCHHHEEEEcCCHhHHHHHHhcCC
Confidence 46999999999887 8899999999999999999999985
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.047 Score=55.48 Aligned_cols=158 Identities=19% Similarity=0.202 Sum_probs=96.3
Q ss_pred CHHHHHHHHHhcCceeEEecCCCccCCCCC---CCC---------CCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHH
Q 044635 560 SMEHIVSAYKRTTTRAILLDYDGTLMPQAS---IDK---------SPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEW 627 (831)
Q Consensus 560 ~~~~~~~~y~~s~~rli~~D~DGTLl~~~~---~~~---------~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~ 627 (831)
.++.++..+++..+|+|++|+|-||++..+ .+. ..+++....+.+|.+ .|..|+|||=-+....
T Consensus 30 ~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~-~~I~v~VVTfSd~~~~--- 105 (219)
T PTZ00445 30 SADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKN-SNIKISVVTFSDKELI--- 105 (219)
T ss_pred HHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHH-CCCeEEEEEccchhhc---
Confidence 345677788899999999999999998222 122 268999999999976 5999999985544331
Q ss_pred hCCCCCceEEecCCEEEEeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHH
Q 044635 628 FSPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAK 707 (831)
Q Consensus 628 ~~~~~~~~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~ 707 (831)
+. ..++.+|. . .+.++..++.- .-..-++. ++-|. |.|... .
T Consensus 106 ----~~----~~~~~~Is------------g-----~~li~~~lk~s---~~~~~i~~-----~~~yy---p~~w~~--p 147 (219)
T PTZ00445 106 ----PS----ENRPRYIS------------G-----DRMVEAALKKS---KCDFKIKK-----VYAYY---PKFWQE--P 147 (219)
T ss_pred ----cc----cCCcceec------------h-----HHHHHHHHHhc---Cccceeee-----eeeeC---CcccCC--h
Confidence 10 01111111 0 12233333311 00111111 12121 222110 1
Q ss_pred HHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 708 ELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 708 el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
.....+ . -++|....|..=++++++.. |+.|++++.|=|+....+.-+.+|.
T Consensus 148 ~~y~~~---------g--------l~KPdp~iK~yHle~ll~~~---gl~peE~LFIDD~~~NVeaA~~lGi 199 (219)
T PTZ00445 148 SDYRPL---------G--------LDAPMPLDKSYHLKQVCSDF---NVNPDEILFIDDDMNNCKNALKEGY 199 (219)
T ss_pred hhhhhh---------c--------ccCCCccchHHHHHHHHHHc---CCCHHHeEeecCCHHHHHHHHHCCC
Confidence 111111 0 15677778888889999998 9999999999999999998888874
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.073 Score=53.03 Aligned_cols=55 Identities=16% Similarity=0.220 Sum_probs=43.3
Q ss_pred hcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCC-HhhHHHH
Q 044635 570 RTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKS-RKTLAEW 627 (831)
Q Consensus 570 ~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~-~~~l~~~ 627 (831)
....+++++|+||||+.. ....+.+.+.++|+.|.+ .|..++|+|+.+ ...+..+
T Consensus 22 ~~~v~~vv~D~Dgtl~~~--~~~~~~pgv~e~L~~Lk~-~g~~l~I~Sn~~~~~~~~~~ 77 (170)
T TIGR01668 22 KVGIKGVVLDKDNTLVYP--DHNEAYPALRDWIEELKA-AGRKLLIVSNNAGEQRAKAV 77 (170)
T ss_pred HCCCCEEEEecCCccccC--CCCCcChhHHHHHHHHHH-cCCEEEEEeCCchHHHHHHH
Confidence 357899999999999984 233677899999999976 589999999988 3444433
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.0064 Score=55.08 Aligned_cols=50 Identities=24% Similarity=0.458 Sum_probs=36.6
Q ss_pred EEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECC---CCHhhHHHHhCC
Q 044635 576 ILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSA---KSRKTLAEWFSP 630 (831)
Q Consensus 576 i~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG---R~~~~l~~~~~~ 630 (831)
|++|+||||.. ...+-|.+.++|+.|.+ .|..++++|- |++..+.+.+..
T Consensus 1 ~l~D~dGvl~~----g~~~ipga~e~l~~L~~-~g~~~~~lTNns~~s~~~~~~~L~~ 53 (101)
T PF13344_consen 1 FLFDLDGVLYN----GNEPIPGAVEALDALRE-RGKPVVFLTNNSSRSREEYAKKLKK 53 (101)
T ss_dssp EEEESTTTSEE----TTEE-TTHHHHHHHHHH-TTSEEEEEES-SSS-HHHHHHHHHH
T ss_pred CEEeCccEeEe----CCCcCcCHHHHHHHHHH-cCCCEEEEeCCCCCCHHHHHHHHHh
Confidence 68999999997 45567888999999987 4888888854 555555555543
|
... |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=94.86 E-value=0.21 Score=64.05 Aligned_cols=65 Identities=12% Similarity=0.145 Sum_probs=47.6
Q ss_pred EEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC--CcccceEe-
Q 044635 732 EVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK--PSKAKYYL- 808 (831)
Q Consensus 732 EV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~--~s~A~y~l- 808 (831)
-+.|. .|...++.+.+. | ..|.++||+.||.++++.|. +|+++|+. .-.|++.+
T Consensus 784 R~sP~--qK~~iV~~lq~~----g---~~V~m~GDG~ND~~ALK~Ad--------------VGIam~~~das~AA~f~l~ 840 (1054)
T TIGR01657 784 RMAPD--QKETLVELLQKL----D---YTVGMCGDGANDCGALKQAD--------------VGISLSEAEASVAAPFTSK 840 (1054)
T ss_pred ecCHH--HHHHHHHHHHhC----C---CeEEEEeCChHHHHHHHhcC--------------cceeeccccceeecccccC
Confidence 35565 499988887653 4 46999999999999999997 57888754 45677775
Q ss_pred -CChhHHHHHHH
Q 044635 809 -DDTVEIVRLMQ 819 (831)
Q Consensus 809 -~d~~eV~~~L~ 819 (831)
++...|.++++
T Consensus 841 ~~~~~~I~~~I~ 852 (1054)
T TIGR01657 841 LASISCVPNVIR 852 (1054)
T ss_pred CCcHHHHHHHHH
Confidence 35566666555
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=94.86 E-value=0.031 Score=56.23 Aligned_cols=34 Identities=12% Similarity=0.212 Sum_probs=28.2
Q ss_pred HHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCC
Q 044635 596 SKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSP 630 (831)
Q Consensus 596 ~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 630 (831)
+++.+.|+.+.+ .|..++|+||-....++.+...
T Consensus 92 ~~~~e~i~~~~~-~~~~v~IvS~~~~~~i~~~~~~ 125 (192)
T PF12710_consen 92 PDAMELIRELKD-NGIKVVIVSGSPDEIIEPIAER 125 (192)
T ss_dssp TTHHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHH
T ss_pred hhHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHH
Confidence 577788888866 5999999999998888888653
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.035 Score=53.83 Aligned_cols=46 Identities=24% Similarity=0.288 Sum_probs=36.4
Q ss_pred eeEEecCCCccCCCCCCC-------CCCCHHHHHHHHHHhhcCCCeEEEECCCC
Q 044635 574 RAILLDYDGTLMPQASID-------KSPNSKTIDILNSLCRDKNNMVFLVSAKS 620 (831)
Q Consensus 574 rli~~D~DGTLl~~~~~~-------~~~s~~~~~~L~~L~~d~g~~V~I~SGR~ 620 (831)
+.+++|+||||+...+.. -.+-+.+.++|+.|.+ .|..++|+|+.+
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~-~g~~~~I~Sn~~ 53 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRA-AGYTVVVVTNQS 53 (147)
T ss_pred CeEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHH-CCCEEEEEeCCC
Confidence 478999999999854311 1356788999999976 599999999876
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.055 Score=56.83 Aligned_cols=62 Identities=11% Similarity=0.259 Sum_probs=44.6
Q ss_pred cCCHHHHHHHHHhcCceeEEecCCCccCCCCCC-------------------------------CCCCCHHHHHHHHHHh
Q 044635 558 KLSMEHIVSAYKRTTTRAILLDYDGTLMPQASI-------------------------------DKSPNSKTIDILNSLC 606 (831)
Q Consensus 558 ~l~~~~~~~~y~~s~~rli~~D~DGTLl~~~~~-------------------------------~~~~s~~~~~~L~~L~ 606 (831)
=.++++|.+.-...+...|.+|+|||+++..+. ...|-+.+.++|+.|.
T Consensus 48 ~~~~~~~~~~~~~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~ 127 (237)
T PRK11009 48 WVSVAQIEKSLEGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHV 127 (237)
T ss_pred EEEHHHhhhhccCCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHH
Confidence 377889988876556669999999999963210 0112344788888886
Q ss_pred hcCCCeEEEECCCC
Q 044635 607 RDKNNMVFLVSAKS 620 (831)
Q Consensus 607 ~d~g~~V~I~SGR~ 620 (831)
+ .|..++++|||+
T Consensus 128 ~-~G~~I~iVTnR~ 140 (237)
T PRK11009 128 K-RGDSIYFITGRT 140 (237)
T ss_pred H-CCCeEEEEeCCC
Confidence 5 588899999886
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.21 Score=62.66 Aligned_cols=137 Identities=19% Similarity=0.211 Sum_probs=88.2
Q ss_pred CCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCceEEEcCCcCCccHHHHHHHH
Q 044635 591 DKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPV 670 (831)
Q Consensus 591 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i 670 (831)
...|-+++.+++++|.+ .|+.++++||-.......+.+++ |+. ++ . ...
T Consensus 548 ~Dp~R~~a~~aI~~l~~-aGI~v~miTGD~~~tA~~IA~~l---GI~--~~--------~----v~~------------- 596 (902)
T PRK10517 548 LDPPKETTAPALKALKA-SGVTVKILTGDSELVAAKVCHEV---GLD--AG--------E----VLI------------- 596 (902)
T ss_pred hCcchhhHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHc---CCC--cc--------C----cee-------------
Confidence 44577899999999977 59999999999999998888764 221 11 0 000
Q ss_pred HHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHH
Q 044635 671 MKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLST 750 (831)
Q Consensus 671 l~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~ 750 (831)
|..++. .+ .+++. +.+.+. .-+-.+.|. .|...++.+.+.
T Consensus 597 ---------G~el~~-----------l~-------~~el~----~~~~~~-------~VfAr~sPe--~K~~IV~~Lq~~ 636 (902)
T PRK10517 597 ---------GSDIET-----------LS-------DDELA----NLAERT-------TLFARLTPM--HKERIVTLLKRE 636 (902)
T ss_pred ---------HHHHHh-----------CC-------HHHHH----HHHhhC-------cEEEEcCHH--HHHHHHHHHHHC
Confidence 000000 00 01222 222221 123345565 498888887553
Q ss_pred hhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEe--CChhHHHHHHH
Q 044635 751 MQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYL--DDTVEIVRLMQ 819 (831)
Q Consensus 751 l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l--~d~~eV~~~L~ 819 (831)
| .-|.++||+.||.++++.++ +|++||+. +..|+.++ +|...+.+.++
T Consensus 637 ----G---~vVam~GDGvNDaPALk~AD--------------VGIAmg~gtdvAkeaADiVLldd~~~~I~~ai~ 690 (902)
T PRK10517 637 ----G---HVVGFMGDGINDAPALRAAD--------------IGISVDGAVDIAREAADIILLEKSLMVLEEGVI 690 (902)
T ss_pred ----C---CEEEEECCCcchHHHHHhCC--------------EEEEeCCcCHHHHHhCCEEEecCChHHHHHHHH
Confidence 3 45899999999999999997 78999864 56788887 45556655544
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.099 Score=56.95 Aligned_cols=57 Identities=18% Similarity=0.303 Sum_probs=46.2
Q ss_pred ceeEEecCCCccCCCCCC---------CCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCC
Q 044635 573 TRAILLDYDGTLMPQASI---------DKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSP 630 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~---------~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 630 (831)
.+++++|+||||...... +..+.+.+.++|++|.+ .|..++|+|||+.......+..
T Consensus 158 ~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~g~~i~i~T~r~~~~~~~~l~~ 223 (300)
T PHA02530 158 PKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKA-AGYEIIVVSGRDGVCEEDTVEW 223 (300)
T ss_pred CCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHh-CCCEEEEEeCCChhhHHHHHHH
Confidence 579999999999974321 34678999999999977 5999999999999887666543
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.085 Score=54.61 Aligned_cols=67 Identities=19% Similarity=0.187 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC------CcccceEeCChhH
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK------PSKAKYYLDDTVE 813 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~------~s~A~y~l~d~~e 813 (831)
|..+++.+++.+ +.+++++++|||+.+|+++.+.+|.. .+.|..|.. ...|.|++++..+
T Consensus 151 ~~~~~~~~~~~~---~~~~~~~i~igD~~~Di~~a~~~g~~-----------~i~v~~g~~~~~~~~~~~~~~~i~~~~~ 216 (226)
T PRK13222 151 DPAPLLLACEKL---GLDPEEMLFVGDSRNDIQAARAAGCP-----------SVGVTYGYNYGEPIALSEPDVVIDHFAE 216 (226)
T ss_pred ChHHHHHHHHHc---CCChhheEEECCCHHHHHHHHHCCCc-----------EEEECcCCCCccchhhcCCCEEECCHHH
Confidence 567889999988 89999999999999999999999852 245555532 2357899999999
Q ss_pred HHHHHHH
Q 044635 814 IVRLMQG 820 (831)
Q Consensus 814 V~~~L~~ 820 (831)
+..+|..
T Consensus 217 l~~~l~~ 223 (226)
T PRK13222 217 LLPLLGL 223 (226)
T ss_pred HHHHHHH
Confidence 9888753
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=94.48 E-value=0.064 Score=53.08 Aligned_cols=51 Identities=24% Similarity=0.436 Sum_probs=38.3
Q ss_pred cccccCCHHHHHHHHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhc
Q 044635 554 PNFKKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRD 608 (831)
Q Consensus 554 ~~f~~l~~~~~~~~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d 608 (831)
++|..++.+.- ..++..+|.+++|.|+||++. ....++++..+.++++.+.
T Consensus 24 ~si~~I~~~~~--~Lk~~Gik~li~DkDNTL~~~--~~~~i~~~~~~~~~~l~~~ 74 (168)
T PF09419_consen 24 PSIRDIDFEAN--HLKKKGIKALIFDKDNTLTPP--YEDEIPPEYAEWLNELKKQ 74 (168)
T ss_pred CChhhCCcchh--hhhhcCceEEEEcCCCCCCCC--CcCcCCHHHHHHHHHHHHH
Confidence 34555555431 135678999999999999975 5677899999999999763
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.32 E-value=0.11 Score=54.38 Aligned_cols=66 Identities=15% Similarity=0.065 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC--C-----cccceEeCChh
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK--P-----SKAKYYLDDTV 812 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~--~-----s~A~y~l~d~~ 812 (831)
+-..+.++++++ |++++++++|||+.+|+.+-+.+|.. .++|+-|.. + ..|+|.+++..
T Consensus 153 ~p~~~~~~~~~l---~~~p~~~l~IGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~i~~~~ 218 (229)
T PRK13226 153 HPLPLLVAAERI---GVAPTDCVYVGDDERDILAARAAGMP-----------SVAALWGYRLHDDDPLAWQADVLVEQPQ 218 (229)
T ss_pred CHHHHHHHHHHh---CCChhhEEEeCCCHHHHHHHHHCCCc-----------EEEEeecCCCCCcChhhcCCCeeeCCHH
Confidence 446678888888 99999999999999999999999852 356666642 1 24889999999
Q ss_pred HHHHHHH
Q 044635 813 EIVRLMQ 819 (831)
Q Consensus 813 eV~~~L~ 819 (831)
++.+.|.
T Consensus 219 el~~~~~ 225 (229)
T PRK13226 219 LLWNPAT 225 (229)
T ss_pred HHHHHhc
Confidence 9988764
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=94.31 E-value=0.27 Score=63.07 Aligned_cols=183 Identities=11% Similarity=0.141 Sum_probs=95.3
Q ss_pred CCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCceEEEcCCcCCccHH---HHH
Q 044635 591 DKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWK---QIA 667 (831)
Q Consensus 591 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~w~~~~~~~~~~w~---~~v 667 (831)
..++-+++.++++.|.+ .|++|+++||=...........+ +++..+...+....+.. ..+. +.+
T Consensus 629 eD~lq~~v~etI~~L~~-AGIkv~mlTGD~~~TA~~IA~~~---~ii~~~~~~~~i~~~~~---------~~~~~~~~~i 695 (1057)
T TIGR01652 629 EDKLQEGVPETIELLRQ-AGIKIWVLTGDKVETAINIGYSC---RLLSRNMEQIVITSESL---------DATRSVEAAI 695 (1057)
T ss_pred hhhhhhccHHHHHHHHH-CCCeEEEEcCCcHHHHHHHHHHh---CCCCCCCeEEEEecCch---------hhhHHHHHHH
Confidence 44567788889998876 59999999999999888887543 34443332222211110 0111 111
Q ss_pred HHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHH
Q 044635 668 EPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRL 747 (831)
Q Consensus 668 ~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~L 747 (831)
...+....+... .....+...+...-. .+......++.+++.+.+......+ +-.+.|. .|+..++.+
T Consensus 696 ~~~~~~~~~~~~-~~~~~~~~~lvi~G~----~l~~~l~~~~~~~f~~l~~~~~~vV-----~aR~sP~--qK~~IV~~l 763 (1057)
T TIGR01652 696 KFGLEGTSEEFN-NLGDSGNVALVIDGK----SLGYALDEELEKEFLQLALKCKAVI-----CCRVSPS--QKADVVRLV 763 (1057)
T ss_pred HHHHHHHHHhhh-hhccCCceEEEEccH----HHHHHHhhHHHHHHHHHHhhCCEEE-----EeCCCHH--HHHHHHHHH
Confidence 111110000000 000011122222111 1100000112233433333222112 2235555 599999888
Q ss_pred HHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEe-CC----CCcccceEeCChhHHHHHH
Q 044635 748 LSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTV-GR----KPSKAKYYLDDTVEIVRLM 818 (831)
Q Consensus 748 l~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~v-G~----~~s~A~y~l~d~~eV~~~L 818 (831)
-+.. -..|+++||+.||.+|++.|. +||.+ |. +...|+|.+.+-..+.++|
T Consensus 764 k~~~------~~~vl~iGDG~ND~~mlk~Ad--------------VGIgi~g~eg~qA~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 764 KKST------GKTTLAIGDGANDVSMIQEAD--------------VGVGISGKEGMQAVMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred HhcC------CCeEEEEeCCCccHHHHhhcC--------------eeeEecChHHHHHHHhhhhhhhhHHHHHHHH
Confidence 6542 246999999999999999997 45654 32 3457888888766666555
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.30 E-value=0.25 Score=46.15 Aligned_cols=54 Identities=22% Similarity=0.289 Sum_probs=42.3
Q ss_pred CCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCC--CC----cccceEeCChhHHHHHHHHH
Q 044635 755 EMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGR--KP----SKAKYYLDDTVEIVRLMQGL 821 (831)
Q Consensus 755 g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~--~~----s~A~y~l~d~~eV~~~L~~L 821 (831)
+.+.++++++||+.||+.|++.+.-. -|++|+ .+ ..|++++.+..+++.++...
T Consensus 90 kk~~~k~vmVGnGaND~laLr~ADlG-------------I~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~~ 149 (152)
T COG4087 90 KKRYEKVVMVGNGANDILALREADLG-------------ICTIQQEGVPERLLLTADVVLKEIAEILDLLKDT 149 (152)
T ss_pred cCCCcEEEEecCCcchHHHhhhcccc-------------eEEeccCCcchHHHhhchhhhhhHHHHHHHhhcc
Confidence 45678999999999999999998742 356664 34 36888899999988887654
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.31 Score=61.13 Aligned_cols=137 Identities=17% Similarity=0.189 Sum_probs=87.2
Q ss_pred CCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCceEEEcCCcCCccHHHHHHHH
Q 044635 591 DKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPV 670 (831)
Q Consensus 591 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i 670 (831)
...|-+++.+++++|.+ .|+.++++||-.......+.+.+ |+.. + .. ..
T Consensus 513 ~Dp~R~~~~~aI~~l~~-aGI~vvmiTGD~~~tA~aIA~~l---GI~~--~--------~v----~~------------- 561 (867)
T TIGR01524 513 LDPPKESTKEAIAALFK-NGINVKVLTGDNEIVTARICQEV---GIDA--N--------DF----LL------------- 561 (867)
T ss_pred eCCCchhHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHc---CCCC--C--------Ce----ee-------------
Confidence 34577899999999977 59999999999999998888754 2310 0 00 00
Q ss_pred HHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHH
Q 044635 671 MKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLST 750 (831)
Q Consensus 671 l~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~ 750 (831)
|..++. .+ .+++ .+.+.+. . -+-.+.|. .|...++.+.+.
T Consensus 562 ---------g~~l~~-----------~~-------~~el----~~~~~~~--~-----vfAr~~Pe--~K~~iV~~lq~~ 601 (867)
T TIGR01524 562 ---------GADIEE-----------LS-------DEEL----ARELRKY--H-----IFARLTPM--QKSRIIGLLKKA 601 (867)
T ss_pred ---------cHhhhh-----------CC-------HHHH----HHHhhhC--e-----EEEECCHH--HHHHHHHHHHhC
Confidence 000000 00 0111 2222221 1 22335565 488888887543
Q ss_pred hhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEe--CChhHHHHHHH
Q 044635 751 MQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYL--DDTVEIVRLMQ 819 (831)
Q Consensus 751 l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l--~d~~eV~~~L~ 819 (831)
| ..|.++||+.||.++++.++ ++++||+. +..|+.++ ++...+..+++
T Consensus 602 ----G---~vVam~GDGvNDapALk~Ad--------------VGIAmg~gtdvAk~aADiVLldd~~~~I~~ai~ 655 (867)
T TIGR01524 602 ----G---HTVGFLGDGINDAPALRKAD--------------VGISVDTAADIAKEASDIILLEKSLMVLEEGVI 655 (867)
T ss_pred ----C---CEEEEECCCcccHHHHHhCC--------------EEEEeCCccHHHHHhCCEEEecCChHHHHHHHH
Confidence 3 46999999999999999997 78999864 56788887 44566655544
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.35 Score=60.82 Aligned_cols=137 Identities=17% Similarity=0.178 Sum_probs=89.0
Q ss_pred CCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCceEEEcCCcCCccHHHHHHHH
Q 044635 591 DKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPV 670 (831)
Q Consensus 591 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i 670 (831)
...|-+++.+++++|.+ .|+.++++||=+......+.+.+ |+. ++. ...
T Consensus 548 ~Dp~R~~a~~aI~~l~~-aGI~v~miTGD~~~tA~aIA~~l---GI~--~~~------------vi~------------- 596 (903)
T PRK15122 548 LDPPKESAAPAIAALRE-NGVAVKVLTGDNPIVTAKICREV---GLE--PGE------------PLL------------- 596 (903)
T ss_pred cCccHHHHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHc---CCC--CCC------------ccc-------------
Confidence 44677899999999976 59999999999999998888754 221 110 000
Q ss_pred HHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHH
Q 044635 671 MKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLST 750 (831)
Q Consensus 671 l~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~ 750 (831)
|..++. .+ .++ +.+...+. .-+-.+.|.. |...++.+.+.
T Consensus 597 ---------G~el~~-----------~~-------~~e----l~~~v~~~-------~VfAr~sPe~--K~~iV~~Lq~~ 636 (903)
T PRK15122 597 ---------GTEIEA-----------MD-------DAA----LAREVEER-------TVFAKLTPLQ--KSRVLKALQAN 636 (903)
T ss_pred ---------hHhhhh-----------CC-------HHH----HHHHhhhC-------CEEEEeCHHH--HHHHHHHHHhC
Confidence 000000 00 012 22222221 1233466664 98888888653
Q ss_pred hhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEe--CChhHHHHHHH
Q 044635 751 MQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYL--DDTVEIVRLMQ 819 (831)
Q Consensus 751 l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l--~d~~eV~~~L~ 819 (831)
| .-|.++||+.||.++++.++ +|++||+. +..|+.++ +|...+.++++
T Consensus 637 ----G---~vVamtGDGvNDaPALk~AD--------------VGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~ 690 (903)
T PRK15122 637 ----G---HTVGFLGDGINDAPALRDAD--------------VGISVDSGADIAKESADIILLEKSLMVLEEGVI 690 (903)
T ss_pred ----C---CEEEEECCCchhHHHHHhCC--------------EEEEeCcccHHHHHhcCEEEecCChHHHHHHHH
Confidence 3 46899999999999999997 78999863 56788887 45566665554
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=94.14 E-value=0.44 Score=58.88 Aligned_cols=167 Identities=17% Similarity=0.184 Sum_probs=102.0
Q ss_pred HHHHhcCceeEEecC---CC--ccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecC
Q 044635 566 SAYKRTTTRAILLDY---DG--TLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEH 640 (831)
Q Consensus 566 ~~y~~s~~rli~~D~---DG--TLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaen 640 (831)
+.+.....|.+++=+ ++ +++..-.....|-+++.+++++|.+ .|..++++||.+......+.+++ |+.. +
T Consensus 410 ~~~~~~G~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~-aGI~v~miTGD~~~tA~~IA~~l---GI~~-~ 484 (755)
T TIGR01647 410 DELASRGYRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERARH-LGVEVKMVTGDHLAIAKETARRL---GLGT-N 484 (755)
T ss_pred HHHHhCCCEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHc---CCCC-C
Confidence 344445567777655 33 4443222455678999999999977 59999999999999999888765 2210 0
Q ss_pred CEEEEeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCC
Q 044635 641 GYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANE 720 (831)
Q Consensus 641 Ga~i~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~ 720 (831)
+. .. + .+. .|.. .... . .++ +.+.+.+.
T Consensus 485 ---~~-----------~~------~---~l~-------~~~~-----------~~~~----~---~~~----~~~~~~~~ 512 (755)
T TIGR01647 485 ---IY-----------TA------D---VLL-------KGDN-----------RDDL----P---SGE----LGEMVEDA 512 (755)
T ss_pred ---Cc-----------CH------H---Hhc-------CCcc-----------hhhC----C---HHH----HHHHHHhC
Confidence 00 00 0 000 0000 0000 0 112 22222222
Q ss_pred CeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC
Q 044635 721 PVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK 800 (831)
Q Consensus 721 ~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~ 800 (831)
. -+-++.|. .|...++.+.+. | .-|.++||+.||.+.++.++ ++++||+.
T Consensus 513 ~-------vfAr~~Pe--~K~~iV~~lq~~----G---~~VamvGDGvNDapAL~~Ad--------------VGIAm~~g 562 (755)
T TIGR01647 513 D-------GFAEVFPE--HKYEIVEILQKR----G---HLVGMTGDGVNDAPALKKAD--------------VGIAVAGA 562 (755)
T ss_pred C-------EEEecCHH--HHHHHHHHHHhc----C---CEEEEEcCCcccHHHHHhCC--------------eeEEecCC
Confidence 1 23446676 498888887543 3 46999999999999999997 68888864
Q ss_pred ----CcccceEe--CChhHHHHHHH
Q 044635 801 ----PSKAKYYL--DDTVEIVRLMQ 819 (831)
Q Consensus 801 ----~s~A~y~l--~d~~eV~~~L~ 819 (831)
+..|+.++ ++...+..+++
T Consensus 563 tdvAkeaADivLl~d~l~~I~~ai~ 587 (755)
T TIGR01647 563 TDAARSAADIVLTEPGLSVIVDAIL 587 (755)
T ss_pred cHHHHHhCCEEEEcCChHHHHHHHH
Confidence 46788877 45666665554
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=94.02 E-value=0.08 Score=54.41 Aligned_cols=64 Identities=11% Similarity=0.027 Sum_probs=44.6
Q ss_pred CCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCCc---ccce--EeCCh
Q 044635 737 GVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPS---KAKY--YLDDT 811 (831)
Q Consensus 737 gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~s---~A~y--~l~d~ 811 (831)
+-.|...++.+. .. + ..++++||+.||++|++.++. +|++..||. .|+- .+.+.
T Consensus 130 ~~~K~~~l~~l~-~~---~---~~~v~vGDs~nDl~ml~~Ag~--------------~ia~~ak~~~~~~~~~~~~~~~~ 188 (203)
T TIGR02137 130 KDPKRQSVIAFK-SL---Y---YRVIAAGDSYNDTTMLSEAHA--------------GILFHAPENVIREFPQFPAVHTY 188 (203)
T ss_pred cchHHHHHHHHH-hh---C---CCEEEEeCCHHHHHHHHhCCC--------------CEEecCCHHHHHhCCCCCcccCH
Confidence 457888888874 33 3 369999999999999999984 566666643 2222 34567
Q ss_pred hHHHHHHHHH
Q 044635 812 VEIVRLMQGL 821 (831)
Q Consensus 812 ~eV~~~L~~L 821 (831)
++++..+..-
T Consensus 189 ~~~~~~~~~~ 198 (203)
T TIGR02137 189 EDLKREFLKA 198 (203)
T ss_pred HHHHHHHHHH
Confidence 7777666544
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=93.96 E-value=0.13 Score=53.63 Aligned_cols=58 Identities=14% Similarity=0.186 Sum_probs=44.3
Q ss_pred CceeEEecCCCccCCCCC-----------------------CCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhh---HH
Q 044635 572 TTRAILLDYDGTLMPQAS-----------------------IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKT---LA 625 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~-----------------------~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~---l~ 625 (831)
.+-++++|+|.|++...+ ....+-+.++++++.|.+ .|..|+++|||+... ..
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~-~G~~Vf~lTGR~e~~r~~T~ 154 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIE-LGIKIFLLSGRWEELRNATL 154 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHH
Confidence 567999999999997321 123456889999999977 699999999999765 55
Q ss_pred HHhCC
Q 044635 626 EWFSP 630 (831)
Q Consensus 626 ~~~~~ 630 (831)
+++..
T Consensus 155 ~nL~~ 159 (229)
T TIGR01675 155 DNLIN 159 (229)
T ss_pred HHHHH
Confidence 55543
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=93.89 E-value=0.15 Score=52.95 Aligned_cols=66 Identities=12% Similarity=0.205 Sum_probs=47.8
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC------CcccceEeC
Q 044635 736 QGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK------PSKAKYYLD 809 (831)
Q Consensus 736 ~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~------~s~A~y~l~ 809 (831)
.+..|..+++++++.+ | .+++++|||+.||+.|.++++.. +.++.|.. ...|+|+++
T Consensus 152 ~~~~K~~~i~~~~~~~---~--~~~~i~iGDs~~Di~aa~~~~~~------------~~~~~~~~~~~~~~~~~~~~~i~ 214 (224)
T PLN02954 152 RSGGKAEAVQHIKKKH---G--YKTMVMIGDGATDLEARKPGGAD------------LFIGYGGVQVREAVAAKADWFVT 214 (224)
T ss_pred CCccHHHHHHHHHHHc---C--CCceEEEeCCHHHHHhhhcCCCC------------EEEecCCCccCHHHHhcCCEEEC
Confidence 3557999999988876 4 36899999999999996664421 33445531 235889999
Q ss_pred ChhHHHHHH
Q 044635 810 DTVEIVRLM 818 (831)
Q Consensus 810 d~~eV~~~L 818 (831)
+..++.++|
T Consensus 215 ~~~el~~~~ 223 (224)
T PLN02954 215 DFQDLIEVL 223 (224)
T ss_pred CHHHHHHhh
Confidence 998887764
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=93.79 E-value=0.58 Score=53.82 Aligned_cols=208 Identities=17% Similarity=0.111 Sum_probs=100.2
Q ss_pred eEEEcCEEEEEEEeecccChHHHHHhhCCcchHH--HHHHHHHHhc-cCCcEEEEeccCcccccCHHHHHHHHHHHHHhC
Q 044635 292 GLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEA--KVSELIKQFH-DQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQH 368 (831)
Q Consensus 292 ~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~--~~~~lr~~~~-~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~ 368 (831)
....+|-.+ -+|.-..+....+...+... .+..-|++|| +.+..++.+..++ .|=-+..+..+.++|++-
T Consensus 240 ~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~v~~~R~~~gLp~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~v 312 (468)
T PF13844_consen 240 QTSVNGVVV-----QNGLATTQTNNKAATGEEVPQNIVVTTRAQYGLPEDAVVFGSFNNL--FKISPETLDLWARILKAV 312 (468)
T ss_dssp EEEETTEEE-----EECCGHHHH-HHHHTTSS--SSEEEEETGGGT--SSSEEEEE-S-G--GG--HHHHHHHHHHHHHS
T ss_pred eEeECCEEe-----ecccchhhhhccccCCccCCccccccCHHHcCCCCCceEEEecCcc--ccCCHHHHHHHHHHHHhC
Confidence 444555433 46776666553332221111 1123467888 7777777777876 566789999999999999
Q ss_pred CCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCC
Q 044635 369 PEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGS 448 (831)
Q Consensus 369 P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGm 448 (831)
|+-+ |++...|. .+ ++.+.+.+.+ .|- +-..++|. +..+.+|..+.|+.+|||+-|..+-|-
T Consensus 313 P~S~----L~L~~~~~--~~------~~~l~~~~~~----~Gv-~~~Ri~f~-~~~~~~ehl~~~~~~DI~LDT~p~nG~ 374 (468)
T PF13844_consen 313 PNSR----LWLLRFPA--SG------EARLRRRFAA----HGV-DPDRIIFS-PVAPREEHLRRYQLADICLDTFPYNGG 374 (468)
T ss_dssp TTEE----EEEEETST--TH------HHHHHHHHHH----TTS--GGGEEEE-E---HHHHHHHGGG-SEEE--SSS--S
T ss_pred CCcE----EEEeeCCH--HH------HHHHHHHHHH----cCC-ChhhEEEc-CCCCHHHHHHHhhhCCEEeeCCCCCCc
Confidence 9865 76666543 11 1223333332 233 23346654 467889999999999999999888775
Q ss_pred --CCCCCCCceEEEeccccc------cccc-----CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhc---c
Q 044635 449 --EPSSPKKSMLVVSEFIGC------SPSL-----SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVS---T 512 (831)
Q Consensus 449 --a~~~~~~g~lVlSe~~G~------~~~l-----~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~---~ 512 (831)
++++--.|++|++=-+-. +..| .+.+-- |.++..+.-.++-+. .+.++...+++++.+. -
T Consensus 375 TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA~---s~~eYv~~Av~La~D-~~~l~~lR~~Lr~~~~~SpL 450 (468)
T PF13844_consen 375 TTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIAD---SEEEYVEIAVRLATD-PERLRALRAKLRDRRSKSPL 450 (468)
T ss_dssp HHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-S---SHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcCC---CHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHhhCCC
Confidence 222222366777622110 0111 122222 344444433333333 3333333344444432 2
Q ss_pred CCHHHHHHHHHHHHHH
Q 044635 513 HDVGYWARSFLQDLER 528 (831)
Q Consensus 513 ~~~~~W~~~~l~~l~~ 528 (831)
.+...|+++|-..+.+
T Consensus 451 fd~~~~ar~lE~a~~~ 466 (468)
T PF13844_consen 451 FDPKRFARNLEAAYRQ 466 (468)
T ss_dssp G-HHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 5677777766655554
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=93.79 E-value=0.16 Score=51.85 Aligned_cols=66 Identities=15% Similarity=0.251 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC------CcccceEeCChhH
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK------PSKAKYYLDDTVE 813 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~------~s~A~y~l~d~~e 813 (831)
|...++.+++.+ |++++++++|||+.+|+.+-+.+|.. .++|+-|.. ...|+|.+++..+
T Consensus 133 ~~~~~~~~~~~~---~~~~~~~l~igD~~~Di~aA~~~Gi~-----------~i~~~~g~~~~~~l~~~~~~~~~~~~~~ 198 (205)
T TIGR01454 133 APDIVREALRLL---DVPPEDAVMVGDAVTDLASARAAGTA-----------TVAALWGEGDAGELLAARPDFLLRKPQS 198 (205)
T ss_pred ChHHHHHHHHHc---CCChhheEEEcCCHHHHHHHHHcCCe-----------EEEEEecCCChhhhhhcCCCeeeCCHHH
Confidence 567778888887 89999999999999999999999852 356776642 3468899999999
Q ss_pred HHHHHH
Q 044635 814 IVRLMQ 819 (831)
Q Consensus 814 V~~~L~ 819 (831)
+..+++
T Consensus 199 l~~~~~ 204 (205)
T TIGR01454 199 LLALCR 204 (205)
T ss_pred HHHHhh
Confidence 987764
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=93.75 E-value=0.055 Score=53.34 Aligned_cols=44 Identities=25% Similarity=0.326 Sum_probs=30.6
Q ss_pred eeEEecCCCccCCCCCCCC---------CCCHHHHHHHHHHhhcCCCeEEEECC
Q 044635 574 RAILLDYDGTLMPQASIDK---------SPNSKTIDILNSLCRDKNNMVFLVSA 618 (831)
Q Consensus 574 rli~~D~DGTLl~~~~~~~---------~~s~~~~~~L~~L~~d~g~~V~I~SG 618 (831)
|+.++|+||||+...+... -..+.+.++|++|.+ .|..++|+|-
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~-~Gy~IvIvTN 53 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHK-KGYKIVIVTN 53 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHH-TTEEEEEEEE
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHh-cCCeEEEEeC
Confidence 6899999999997543111 124579999999976 5888888873
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=93.70 E-value=0.088 Score=55.40 Aligned_cols=50 Identities=32% Similarity=0.416 Sum_probs=40.0
Q ss_pred EEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEEC---CCCHhhHHHHhCC
Q 044635 576 ILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVS---AKSRKTLAEWFSP 630 (831)
Q Consensus 576 i~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~S---GR~~~~l~~~~~~ 630 (831)
++||+||||++ ... +-+.+.++|+.|.+ .|..++++| ||+...+.+.+..
T Consensus 1 ~lfD~DGvL~~---~~~-~~~~a~e~i~~l~~-~g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 1 FLFDIDGVLWL---GHK-PIPGAAEALNRLRA-KGKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred CEEeCcCccCc---CCc-cCcCHHHHHHHHHH-CCCeEEEEECCCCCCHHHHHHHHHH
Confidence 58999999998 344 44588999999976 588898886 9999987776654
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.66 E-value=0.42 Score=60.26 Aligned_cols=41 Identities=15% Similarity=0.325 Sum_probs=34.8
Q ss_pred CCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 590 IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 590 ~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
...+|-+++.++++.|.+ .|++++++||=.......+-+++
T Consensus 544 ~~Dppr~~v~~aI~~l~~-AGI~v~MiTGD~~~TA~aIa~~~ 584 (917)
T COG0474 544 IEDPPREDVKEAIEELRE-AGIKVWMITGDHVETAIAIAKEC 584 (917)
T ss_pred ccCCCCccHHHHHHHHHH-CCCcEEEECCCCHHHHHHHHHHc
Confidence 344577899999999877 59999999999999998888765
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=93.55 E-value=0.13 Score=52.83 Aligned_cols=64 Identities=17% Similarity=0.108 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC------CcccceEeCChhH
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK------PSKAKYYLDDTVE 813 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~------~s~A~y~l~d~~e 813 (831)
+-.++.++++.+ |++++++++|||+.+|+.+-+.+|.. .+.|.-|.. ...|+|++++..+
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~~~igDs~~d~~aa~~aG~~-----------~i~v~~g~~~~~~l~~~~a~~~i~~~~~ 208 (213)
T TIGR01449 143 HPDPLLLAAERL---GVAPQQMVYVGDSRVDIQAARAAGCP-----------SVLLTYGYRYGEAIDLLPPDVLYDSLNE 208 (213)
T ss_pred ChHHHHHHHHHc---CCChhHeEEeCCCHHHHHHHHHCCCe-----------EEEEccCCCCCcchhhcCCCeEeCCHHH
Confidence 456788888888 89999999999999999999999852 234444532 2468899999988
Q ss_pred HHHH
Q 044635 814 IVRL 817 (831)
Q Consensus 814 V~~~ 817 (831)
+..+
T Consensus 209 l~~~ 212 (213)
T TIGR01449 209 LPPL 212 (213)
T ss_pred HHhh
Confidence 7664
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=93.44 E-value=0.097 Score=55.24 Aligned_cols=54 Identities=19% Similarity=0.322 Sum_probs=41.6
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHH--HHhCC
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLA--EWFSP 630 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~--~~~~~ 630 (831)
+.+++++|+||||.. ...+-+.+.++|++|.+ .|..++|+|..++.... +.+..
T Consensus 7 ~~~~~~~D~dG~l~~----~~~~~pga~e~L~~L~~-~G~~~~ivTN~~~~~~~~~~~L~~ 62 (242)
T TIGR01459 7 DYDVFLLDLWGVIID----GNHTYPGAVQNLNKIIA-QGKPVYFVSNSPRNIFSLHKTLKS 62 (242)
T ss_pred cCCEEEEeccccccc----CCccCccHHHHHHHHHH-CCCEEEEEeCCCCChHHHHHHHHH
Confidence 467999999999997 34567999999999987 59999999776654333 44443
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=93.39 E-value=4.7 Score=45.33 Aligned_cols=68 Identities=12% Similarity=0.144 Sum_probs=44.6
Q ss_pred EEecCCCCHHHHHHHHHHcCEeEECC---CccCCCCCCCCCceEEEeccccccccc-C---CCceeCCCCHHHHHHHHHH
Q 044635 418 VLIDEPLKFYERIAYYVVAECCLVTA---VRDGSEPSSPKKSMLVVSEFIGCSPSL-S---GAIRVNPWNIDAVSDAMDS 490 (831)
Q Consensus 418 ~~~~~~v~~~el~aly~~ADv~vvtS---~~eGma~~~~~~g~lVlSe~~G~~~~l-~---~allVnP~d~~~~A~ai~~ 490 (831)
+.+.++++..++.++++.|+++|-.| ..|..++ |+++++ .|--++. . +.++| +.|++++.+++.+
T Consensus 264 v~l~~~l~~~~~l~Ll~~a~~vitdSSggi~EA~~l-----g~Pvv~--l~~R~e~~~~g~nvl~v-g~~~~~I~~a~~~ 335 (365)
T TIGR03568 264 FRLFKSLGQERYLSLLKNADAVIGNSSSGIIEAPSF-----GVPTIN--IGTRQKGRLRADSVIDV-DPDKEEIVKAIEK 335 (365)
T ss_pred EEEECCCChHHHHHHHHhCCEEEEcChhHHHhhhhc-----CCCEEe--ecCCchhhhhcCeEEEe-CCCHHHHHHHHHH
Confidence 34567899999999999999988665 2333333 333332 2223333 2 22447 6789999999999
Q ss_pred Hhc
Q 044635 491 ALE 493 (831)
Q Consensus 491 aL~ 493 (831)
++.
T Consensus 336 ~~~ 338 (365)
T TIGR03568 336 LLD 338 (365)
T ss_pred HhC
Confidence 653
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=93.38 E-value=9.6 Score=42.58 Aligned_cols=137 Identities=18% Similarity=0.232 Sum_probs=82.2
Q ss_pred CCcEEEEeccCcccc-cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCc
Q 044635 337 QGKVMLLGVDDMDIF-KGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYD 415 (831)
Q Consensus 337 ~~~~iil~VdRld~~-KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~ 415 (831)
..+.+++..=|-.-. +++...+.|+.++++++|+.. +|.-..| | +.+++.. +.+++.. .
T Consensus 203 ~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~----viyp~H~-~---~~v~e~~----------~~~L~~~--~ 262 (383)
T COG0381 203 DKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVI----VIYPVHP-R---PRVRELV----------LKRLKNV--E 262 (383)
T ss_pred cCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCce----EEEeCCC-C---hhhhHHH----------HHHhCCC--C
Confidence 345677777787766 999999999999999998764 3322222 1 2222221 1122221 1
Q ss_pred cEEEecCCCCHHHHHHHHHHcCEeEECCCccCCCCCCCCCc--eEEEecccccccccC--CCceeCCCCHHHHHHHHHHH
Q 044635 416 PVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEPSSPKKS--MLVVSEFIGCSPSLS--GAIRVNPWNIDAVSDAMDSA 491 (831)
Q Consensus 416 pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~~~~~~g--~lVlSe~~G~~~~l~--~allVnP~d~~~~A~ai~~a 491 (831)
.|+++ .++...+...|...|-+.+--| -|+-.++..-| ++++=+.+--.+.+. +.++|+ .|.+.+.+++.++
T Consensus 263 ~v~li-~pl~~~~f~~L~~~a~~iltDS--GgiqEEAp~lg~Pvl~lR~~TERPE~v~agt~~lvg-~~~~~i~~~~~~l 338 (383)
T COG0381 263 RVKLI-DPLGYLDFHNLMKNAFLILTDS--GGIQEEAPSLGKPVLVLRDTTERPEGVEAGTNILVG-TDEENILDAATEL 338 (383)
T ss_pred cEEEe-CCcchHHHHHHHHhceEEEecC--CchhhhHHhcCCcEEeeccCCCCccceecCceEEeC-ccHHHHHHHHHHH
Confidence 35554 4899999999999996655433 34411121123 333434443333342 335565 4789999999999
Q ss_pred hcCCHH
Q 044635 492 LEMADQ 497 (831)
Q Consensus 492 L~m~~~ 497 (831)
++++..
T Consensus 339 l~~~~~ 344 (383)
T COG0381 339 LEDEEF 344 (383)
T ss_pred hhChHH
Confidence 986644
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=93.32 E-value=0.089 Score=53.58 Aligned_cols=42 Identities=19% Similarity=0.170 Sum_probs=36.9
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchh
Q 044635 736 QGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISS 780 (831)
Q Consensus 736 ~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~ 780 (831)
.+-.|..+++.+++.. +++++.++++|||.+|++|++.++..
T Consensus 152 ~g~~K~~~l~~~~~~~---~~~~~~~~~~gDs~~D~~~~~~a~~~ 193 (202)
T TIGR01490 152 KGEGKVHALAELLAEE---QIDLKDSYAYGDSISDLPLLSLVGHP 193 (202)
T ss_pred CChHHHHHHHHHHHHc---CCCHHHcEeeeCCcccHHHHHhCCCc
Confidence 4567888899988876 88899999999999999999999864
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=93.08 E-value=0.48 Score=55.64 Aligned_cols=61 Identities=10% Similarity=0.125 Sum_probs=42.8
Q ss_pred hcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 570 RTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 570 ~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
....+.+++=++++++..-.....+-+++.++++.|.+ .|..++++||.........-..+
T Consensus 324 ~~g~~~~~~a~~~~~~g~i~l~d~lr~~~~~~i~~l~~-~gi~~~~ltGD~~~~a~~ia~~l 384 (499)
T TIGR01494 324 QSGLRVLAVASKETLLGLLGLEDPLRDDAKETISELRE-AGIRVIMLTGDNVLTAKAIAKEL 384 (499)
T ss_pred hCCCEEEEEEECCeEEEEEEecCCCchhHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHc
Confidence 34445555556666654222344567888888888876 58999999999999888877654
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=93.06 E-value=0.94 Score=58.38 Aligned_cols=39 Identities=10% Similarity=0.101 Sum_probs=33.0
Q ss_pred CCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCC
Q 044635 591 DKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSP 630 (831)
Q Consensus 591 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 630 (831)
...+-+.+.+++++|.+ .|+.|+++||-.......+...
T Consensus 724 ~D~lr~~v~~~I~~l~~-agi~v~mlTGD~~~tAi~IA~s 762 (1178)
T PLN03190 724 EDKLQQGVPEAIESLRT-AGIKVWVLTGDKQETAISIGYS 762 (1178)
T ss_pred ecCCchhHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHH
Confidence 45678899999999976 5999999999999988877654
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.94 E-value=0.17 Score=51.69 Aligned_cols=64 Identities=16% Similarity=0.126 Sum_probs=43.2
Q ss_pred CCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCC----cccce-EeCChh
Q 044635 738 VNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKP----SKAKY-YLDDTV 812 (831)
Q Consensus 738 vnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~----s~A~y-~l~d~~ 812 (831)
-.|..+++.+. ..++.+++|||+.||++|.++++. +|.++... ..+.+ .+++..
T Consensus 131 ~~k~~~l~~~~-------~~~~~~v~iGDs~~D~~~~~aa~~--------------~v~~~~~~~~~~~~~~~~~~~~~~ 189 (205)
T PRK13582 131 DGKRQAVKALK-------SLGYRVIAAGDSYNDTTMLGEADA--------------GILFRPPANVIAEFPQFPAVHTYD 189 (205)
T ss_pred chHHHHHHHHH-------HhCCeEEEEeCCHHHHHHHHhCCC--------------CEEECCCHHHHHhCCcccccCCHH
Confidence 34655555442 234789999999999999999973 34444431 23454 678898
Q ss_pred HHHHHHHHHH
Q 044635 813 EIVRLMQGLA 822 (831)
Q Consensus 813 eV~~~L~~L~ 822 (831)
+++..|....
T Consensus 190 el~~~l~~~~ 199 (205)
T PRK13582 190 ELLAAIDKAS 199 (205)
T ss_pred HHHHHHHHHH
Confidence 8887776643
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.75 E-value=0.78 Score=53.76 Aligned_cols=173 Identities=16% Similarity=0.175 Sum_probs=91.0
Q ss_pred CCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCceEEEcCCcCCccHHHHHHHHH
Q 044635 592 KSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVM 671 (831)
Q Consensus 592 ~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~il 671 (831)
.+..+.+...|+-|++ .|++|+..||--.+...-+.. ...++.-+-.+. .+.. ..-+..+..-+
T Consensus 657 DkLQ~dVk~tLElLRN-AgikiWMLTGDKlETA~ciAk---Ss~L~sR~q~ih----------v~~~--v~sr~dah~eL 720 (1051)
T KOG0210|consen 657 DKLQDDVKPTLELLRN-AGIKIWMLTGDKLETAICIAK---SSRLFSRGQYIH----------VIRS--VTSRGDAHNEL 720 (1051)
T ss_pred HHHhhhhHhHHHHHhh-cCcEEEEEcCcchhheeeeeh---hccceecCceEE----------EEEe--cCCchHHHHHH
Confidence 3455677778888866 599999999987766432221 122222111111 1110 01123344455
Q ss_pred HHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHh
Q 044635 672 KLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTM 751 (831)
Q Consensus 672 ~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l 751 (831)
+.+...++.+.+-..+ ++.+ ..+-..+++-++....+..+. .+-...-|+..++.|-++-
T Consensus 721 ~~lR~k~~~aLvi~G~-Sl~~------------cl~yye~Ef~el~~~~~aVv~-------CRctPtQKA~v~~llq~~t 780 (1051)
T KOG0210|consen 721 NNLRRKTDCALVIDGE-SLEF------------CLKYYEDEFIELVCELPAVVC-------CRCTPTQKAQVVRLLQKKT 780 (1051)
T ss_pred HHhhcCCCcEEEEcCc-hHHH------------HHHHHHHHHHHHHHhcCcEEE-------EecChhHHHHHHHHHHHhh
Confidence 5554444333332211 1110 112222223232222232222 2333345888887776653
Q ss_pred hhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCC----CCcccceEeCChhHHHHHHH
Q 044635 752 QEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGR----KPSKAKYYLDDTVEIVRLMQ 819 (831)
Q Consensus 752 ~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~----~~s~A~y~l~d~~eV~~~L~ 819 (831)
| ..|.||||+.||..|++.++-. +|+ +|+ +.-+|+|.+.....|-++|-
T Consensus 781 ---~---krvc~IGDGGNDVsMIq~A~~G------------iGI-~gkEGkQASLAADfSItqF~Hv~rLLl 833 (1051)
T KOG0210|consen 781 ---G---KRVCAIGDGGNDVSMIQAADVG------------IGI-VGKEGKQASLAADFSITQFSHVSRLLL 833 (1051)
T ss_pred ---C---ceEEEEcCCCccchheeecccc------------eee-ecccccccchhccccHHHHHHHHHHhh
Confidence 3 6799999999999999998742 333 343 23478888876666666664
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=92.69 E-value=0.12 Score=60.58 Aligned_cols=50 Identities=14% Similarity=0.139 Sum_probs=38.2
Q ss_pred cCceeEEecCCCccCCCCCCC---------CCCCHHHHHHHHHHhhcCCCeEEEECCCCH
Q 044635 571 TTTRAILLDYDGTLMPQASID---------KSPNSKTIDILNSLCRDKNNMVFLVSAKSR 621 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~~~---------~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~ 621 (831)
.+.|+++||+||||....+.. ..+-+.+.++|++|.+ .|..++|+|..+.
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~-~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEA-DGFKICIFTNQGG 224 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHH-CCCEEEEEECCcc
Confidence 457999999999999743211 1235788999999977 5999999987554
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=92.67 E-value=0.74 Score=58.92 Aligned_cols=61 Identities=8% Similarity=-0.052 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC-----CcccceEeCChhHH
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK-----PSKAKYYLDDTVEI 814 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~-----~s~A~y~l~d~~eV 814 (831)
+......+++.+ |++++++++|||+.+|+..-+.+|.. .++|.-|.. ...|.+.+++..++
T Consensus 220 ~Pe~~~~a~~~l---gv~p~e~v~IgDs~~Di~AA~~aGm~-----------~I~v~~~~~~~~L~~~~a~~vi~~l~el 285 (1057)
T PLN02919 220 APDIFLAAAKIL---GVPTSECVVIEDALAGVQAARAAGMR-----------CIAVTTTLSEEILKDAGPSLIRKDIGNI 285 (1057)
T ss_pred CHHHHHHHHHHc---CcCcccEEEEcCCHHHHHHHHHcCCE-----------EEEECCCCCHHHHhhCCCCEEECChHHC
Confidence 356677788887 89999999999999999988888742 244443421 34677888988886
|
|
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=92.38 E-value=0.38 Score=40.79 Aligned_cols=57 Identities=21% Similarity=0.279 Sum_probs=42.6
Q ss_pred HHHHHHHHhhhcCCCcccEEEEcCC-chhHHHHHHcchhcCCCCCCCCCceEEEEeCCC--------CcccceEeCChhH
Q 044635 743 VAKRLLSTMQEREMLPDFVLCVGDD-RSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK--------PSKAKYYLDDTVE 813 (831)
Q Consensus 743 al~~Ll~~l~~~g~~~d~vla~GD~-~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~--------~s~A~y~l~d~~e 813 (831)
.++.+++.+ +++++++++|||+ .+|+.+=+.+|.. .+.|.-|.. ...++|++++..|
T Consensus 9 ~~~~a~~~~---~~~~~~~~~VGD~~~~Di~~a~~~G~~-----------~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e 74 (75)
T PF13242_consen 9 MLEQALKRL---GVDPSRCVMVGDSLETDIEAAKAAGID-----------TILVLTGVYSPEDLEKAEHKPDYVVDDLKE 74 (75)
T ss_dssp HHHHHHHHH---TSGGGGEEEEESSTTTHHHHHHHTTSE-----------EEEESSSSSCCCGHHHSSSTTSEEESSGGG
T ss_pred HHHHHHHHc---CCCHHHEEEEcCCcHhHHHHHHHcCCc-----------EEEECCCCCCHHHHhccCCCCCEEECCHHh
Confidence 456667776 8899999999999 9999999999852 234444542 2478888888765
|
... |
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=92.21 E-value=0.031 Score=54.49 Aligned_cols=96 Identities=17% Similarity=0.268 Sum_probs=48.4
Q ss_pred HHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCCh-----HHHHHH-HhcCCeEeecCHHh
Q 044635 195 MEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIR-----EEILRA-LLNSDLIGFHTFDY 268 (831)
Q Consensus 195 ~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r-----~eil~~-ll~~dligf~t~~~ 268 (831)
++..++ |+|++|.++...+...... +.++.+++|.+++.........+. ..+.+. .-.+|.+-.-+..-
T Consensus 76 i~~~~~--DiVh~~~~~~~~~~~~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~~ 150 (177)
T PF13439_consen 76 IKKEKP--DIVHIHGPPAFWIALLACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSEST 150 (177)
T ss_dssp HHHHT---SEEECCTTHCCCHHHHHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSHHH
T ss_pred HHHcCC--CeEEecccchhHHHHHhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEECHHH
Confidence 343455 8999999888765544333 889999999988531111111111 111111 24578777666655
Q ss_pred HHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHH
Q 044635 269 ARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQ 315 (831)
Q Consensus 269 ~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~ 315 (831)
.+.+.+ .|. ...++.++|+|||.+.|+
T Consensus 151 ~~~l~~-----~~~---------------~~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 151 KDELIK-----FGI---------------PPEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp HHHHHH-----HT-----------------SS-EEE----B-CCCH-
T ss_pred HHHHHH-----hCC---------------cccCCEEEECCccHHHcC
Confidence 554443 121 124788999999998873
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=92.19 E-value=0.29 Score=49.48 Aligned_cols=35 Identities=11% Similarity=-0.073 Sum_probs=27.6
Q ss_pred HHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 596 SKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 596 ~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
+.+.++|+.|.+ .|..++|+||.....++.+++.+
T Consensus 83 ~g~~e~l~~l~~-~g~~~~IvS~~~~~~~~~~l~~~ 117 (201)
T TIGR01491 83 DYAEELVRWLKE-KGLKTAIVSGGIMCLAKKVAEKL 117 (201)
T ss_pred ccHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHHHh
Confidence 345677788866 59999999999998888887654
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=92.06 E-value=0.23 Score=51.51 Aligned_cols=36 Identities=19% Similarity=0.225 Sum_probs=28.6
Q ss_pred CHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 595 NSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 595 s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
-+.+.++|+.|.+ .|..++|+||.....+..++..+
T Consensus 86 ~pg~~e~l~~l~~-~g~~~~IvS~~~~~~i~~~l~~~ 121 (224)
T PLN02954 86 SPGIPELVKKLRA-RGTDVYLVSGGFRQMIAPVAAIL 121 (224)
T ss_pred CccHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHHh
Confidence 3566778888866 58999999999999888877654
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=91.92 E-value=0.15 Score=54.58 Aligned_cols=58 Identities=28% Similarity=0.363 Sum_probs=42.0
Q ss_pred cCceeEEecCCCccCCCCC-------C----------------CCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhH---
Q 044635 571 TTTRAILLDYDGTLMPQAS-------I----------------DKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTL--- 624 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~-------~----------------~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l--- 624 (831)
.++..|++|+|+|+++..+ . ...+-+.+.++|+.|.+ .|..++|+|+|+....
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~-~G~~v~iVTnR~~~~~~~T 151 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANS-KGVKIFYVSNRSEKEKAAT 151 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHH-CCCeEEEEeCCCcchHHHH
Confidence 4567999999999997431 0 11234778899999976 5999999999985543
Q ss_pred HHHhC
Q 044635 625 AEWFS 629 (831)
Q Consensus 625 ~~~~~ 629 (831)
..++.
T Consensus 152 ~~~Lk 156 (266)
T TIGR01533 152 LKNLK 156 (266)
T ss_pred HHHHH
Confidence 35554
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=91.88 E-value=0.25 Score=49.42 Aligned_cols=57 Identities=23% Similarity=0.242 Sum_probs=43.3
Q ss_pred ceeEEecCCCccCCCCCC-----------------------CCCCCHHHHHHHHHHhhcCCCeEEEECCC-CHhhHHHHh
Q 044635 573 TRAILLDYDGTLMPQASI-----------------------DKSPNSKTIDILNSLCRDKNNMVFLVSAK-SRKTLAEWF 628 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~-----------------------~~~~s~~~~~~L~~L~~d~g~~V~I~SGR-~~~~l~~~~ 628 (831)
.||++||+|+||.++.-. ...+-+.+.++|+.|.+ .|..++|+|+. ....+...+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~-~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKD-AGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHH-CCCEEEEEeCCCChHHHHHHH
Confidence 589999999999974310 01234788999999976 59999999988 777777766
Q ss_pred CC
Q 044635 629 SP 630 (831)
Q Consensus 629 ~~ 630 (831)
..
T Consensus 81 ~~ 82 (174)
T TIGR01685 81 GT 82 (174)
T ss_pred Hh
Confidence 54
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=91.60 E-value=0.27 Score=48.01 Aligned_cols=56 Identities=11% Similarity=0.278 Sum_probs=41.5
Q ss_pred eEEecCCCccCCCCC--------CCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHh---hHHHHhCCC
Q 044635 575 AILLDYDGTLMPQAS--------IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRK---TLAEWFSPC 631 (831)
Q Consensus 575 li~~D~DGTLl~~~~--------~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~---~l~~~~~~~ 631 (831)
++++|+|||++...- ......+.+.++.+++.+ +|..++-+|+|+.. ..+.|+...
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~-~GY~ilYlTaRp~~qa~~Tr~~L~~~ 67 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIAD-NGYKILYLTARPIGQANRTRSWLAQH 67 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHH-CCeEEEEECcCcHHHHHHHHHHHHHH
Confidence 489999999998421 011345788899999976 69999999999965 456677654
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=91.54 E-value=19 Score=40.14 Aligned_cols=257 Identities=16% Similarity=0.113 Sum_probs=124.6
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHh--cCC
Q 044635 182 AYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALL--NSD 259 (831)
Q Consensus 182 ~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll--~~d 259 (831)
..-.+=..|++.+.+ .+| |+|.||.=-.-.+...+-...-++||+.. |-=-=+.|. .-|.-+|+.|-+. -||
T Consensus 51 ~~~~~~~~~~~~~~~-~~P--d~Vlv~GD~~~~la~alaA~~~~ipv~Hi-eaGlRs~d~--~~g~~de~~R~~i~~la~ 124 (346)
T PF02350_consen 51 STGLAIIELADVLER-EKP--DAVLVLGDRNEALAAALAAFYLNIPVAHI-EAGLRSGDR--TEGMPDEINRHAIDKLAH 124 (346)
T ss_dssp HHHHHHHHHHHHHHH-HT---SEEEEETTSHHHHHHHHHHHHTT-EEEEE-S-----S-T--TSSTTHHHHHHHHHHH-S
T ss_pred HHHHHHHHHHHHHHh-cCC--CEEEEEcCCchHHHHHHHHHHhCCCEEEe-cCCCCcccc--CCCCchhhhhhhhhhhhh
Confidence 333344445554444 366 89999988877777766666667775432 110001111 1233444444432 256
Q ss_pred eEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCc
Q 044635 260 LIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGK 339 (831)
Q Consensus 260 ligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~ 339 (831)
+----|..+.++.++ +|.. .++ +..-| .+++|.-........+... ...+.... .++
T Consensus 125 lhf~~t~~~~~~L~~-----~G~~--~~r----I~~vG--------~~~~D~l~~~~~~~~~~~~--~~~i~~~~--~~~ 181 (346)
T PF02350_consen 125 LHFAPTEEARERLLQ-----EGEP--PER----IFVVG--------NPGIDALLQNKEEIEEKYK--NSGILQDA--PKP 181 (346)
T ss_dssp EEEESSHHHHHHHHH-----TT----GGG----EEE-----------HHHHHHHHHHHTTCC-HH--HHHHHHCT--TSE
T ss_pred hhccCCHHHHHHHHh-----cCCC--CCe----EEEEC--------hHHHHHHHHhHHHHhhhhh--hHHHHhcc--CCC
Confidence 665667777777664 2332 111 22222 3566654333221111110 11221122 556
Q ss_pred EEEEeccCcccc---cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCcc
Q 044635 340 VMLLGVDDMDIF---KGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDP 416 (831)
Q Consensus 340 ~iil~VdRld~~---KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~p 416 (831)
.+++..=|.... ......+.+++.+.+. +++. +|....++ +...+.+.+...+ | ..
T Consensus 182 ~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~----vi~~~hn~-------p~~~~~i~~~l~~----~-----~~ 240 (346)
T PF02350_consen 182 YILVTLHPVTNEDNPERLEQILEALKALAER-QNVP----VIFPLHNN-------PRGSDIIIEKLKK----Y-----DN 240 (346)
T ss_dssp EEEEE-S-CCCCTHH--HHHHHHHHHHHHHH-TTEE----EEEE--S--------HHHHHHHHHHHTT----------TT
T ss_pred EEEEEeCcchhcCChHHHHHHHHHHHHHHhc-CCCc----EEEEecCC-------chHHHHHHHHhcc----c-----CC
Confidence 666666555443 3466777788888776 5443 55544322 1223333222221 1 13
Q ss_pred EEEecCCCCHHHHHHHHHHcCEeEECCC--c-cCCCCCCCCCceEEEeccccccccc---CCCceeCCCCHHHHHHHHHH
Q 044635 417 VVLIDEPLKFYERIAYYVVAECCLVTAV--R-DGSEPSSPKKSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDS 490 (831)
Q Consensus 417 v~~~~~~v~~~el~aly~~ADv~vvtS~--~-eGma~~~~~~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~ 490 (831)
+.++ .+++..++.++++.|+++|-.|- . |...+ +.|+|.-...|--++. ...++|. .|.+++.++|.+
T Consensus 241 v~~~-~~l~~~~~l~ll~~a~~vvgdSsGI~eEa~~l----g~P~v~iR~~geRqe~r~~~~nvlv~-~~~~~I~~ai~~ 314 (346)
T PF02350_consen 241 VRLI-EPLGYEEYLSLLKNADLVVGDSSGIQEEAPSL----GKPVVNIRDSGERQEGRERGSNVLVG-TDPEAIIQAIEK 314 (346)
T ss_dssp EEEE-----HHHHHHHHHHESEEEESSHHHHHHGGGG----T--EEECSSS-S-HHHHHTTSEEEET-SSHHHHHHHHHH
T ss_pred EEEE-CCCCHHHHHHHHhcceEEEEcCccHHHHHHHh----CCeEEEecCCCCCHHHHhhcceEEeC-CCHHHHHHHHHH
Confidence 5554 47999999999999999988774 2 32222 2344444444544444 3456665 799999999999
Q ss_pred HhcC
Q 044635 491 ALEM 494 (831)
Q Consensus 491 aL~m 494 (831)
++..
T Consensus 315 ~l~~ 318 (346)
T PF02350_consen 315 ALSD 318 (346)
T ss_dssp HHH-
T ss_pred HHhC
Confidence 9974
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=91.37 E-value=0.31 Score=61.56 Aligned_cols=41 Identities=10% Similarity=0.177 Sum_probs=34.6
Q ss_pred CCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 590 IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 590 ~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
....+-+++.+++++|.+ .|..++++||..........+.+
T Consensus 534 ~~Dplr~~v~e~I~~l~~-aGI~v~miTGD~~~tA~~ia~~~ 574 (917)
T TIGR01116 534 MLDPPRPEVADAIEKCRT-AGIRVIMITGDNKETAEAICRRI 574 (917)
T ss_pred eeCCCchhHHHHHHHHHH-CCCEEEEecCCCHHHHHHHHHHc
Confidence 345678999999999976 59999999999999888887654
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=91.28 E-value=0.31 Score=47.25 Aligned_cols=58 Identities=14% Similarity=0.159 Sum_probs=43.5
Q ss_pred CceeEEecCCCccCCCCC------CCC-----------------CCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHh
Q 044635 572 TTRAILLDYDGTLMPQAS------IDK-----------------SPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWF 628 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~------~~~-----------------~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~ 628 (831)
++.++++|+||||+.... ... .+-|.+.+.|+.|.+ +..++|+|+.+...++..+
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~--~~~l~I~Ts~~~~~~~~il 78 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASE--LFELVVFTAGLRMYADPVL 78 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHh--ccEEEEEeCCcHHHHHHHH
Confidence 367899999999998521 000 124678899999963 7899999999999888877
Q ss_pred CCC
Q 044635 629 SPC 631 (831)
Q Consensus 629 ~~~ 631 (831)
..+
T Consensus 79 ~~l 81 (148)
T smart00577 79 DLL 81 (148)
T ss_pred HHh
Confidence 644
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=90.86 E-value=0.28 Score=49.98 Aligned_cols=33 Identities=21% Similarity=0.336 Sum_probs=28.4
Q ss_pred HHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcc
Q 044635 743 VAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVII 778 (831)
Q Consensus 743 al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~ 778 (831)
.+..+++.+ +.++..|+++||+.||..|++.|+
T Consensus 183 ~~~~~i~~l---~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 183 IFLRIIKEL---QVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHHHHHHHH---TCTGGGEEEEESSGGHHHHHHHSS
T ss_pred hHHHHHHHH---hcCCCEEEEEccCHHHHHHHHhCc
Confidence 557777777 778889999999999999999875
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=90.75 E-value=0.25 Score=52.44 Aligned_cols=51 Identities=16% Similarity=0.274 Sum_probs=38.7
Q ss_pred CceeEEecCCCccCCCCC-----------------C-------CCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhh
Q 044635 572 TTRAILLDYDGTLMPQAS-----------------I-------DKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKT 623 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~-----------------~-------~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~ 623 (831)
.+-++++|+|+|+++..+ . ...+-+.+++.++.+.+ .|..|+++|||+...
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~-~G~kIf~VSgR~e~~ 174 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVS-LGFKIIFLSGRLKDK 174 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHH-CCCEEEEEeCCchhH
Confidence 356999999999995211 0 22345788999999976 699999999998643
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=89.60 E-value=38 Score=37.92 Aligned_cols=259 Identities=15% Similarity=0.132 Sum_probs=129.3
Q ss_pred CEEEEeCccc--cchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHh
Q 044635 203 DFVWVHDYHL--MVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRML 280 (831)
Q Consensus 203 d~vwvhDyhL--~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l 280 (831)
|++..=|+-= ..|...+|+.+|++||.++.- |.++.==|.|...+.. .+|++.--.+.-..-|-. .
T Consensus 87 D~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~-----PsVWAWr~~Ra~~i~~--~~D~lLailPFE~~~y~k-----~ 154 (381)
T COG0763 87 DVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVS-----PSVWAWRPKRAVKIAK--YVDHLLAILPFEPAFYDK-----F 154 (381)
T ss_pred CEEEEeCCCCCchHHHHHHHHhCCCCCeEEEEC-----cceeeechhhHHHHHH--HhhHeeeecCCCHHHHHh-----c
Confidence 6666656542 345678999999999987654 3344322445333333 256654322211111111 1
Q ss_pred CCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-c-CCcEEEEecc--CcccccCHHH
Q 044635 281 GLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-D-QGKVMLLGVD--DMDIFKGISL 356 (831)
Q Consensus 281 ~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~-~~~~iil~Vd--Rld~~KGi~~ 356 (831)
|. -..|-|++. .|.-.+ ....+..|++++ + ..+.+.+-.| |=+-..-.+-
T Consensus 155 g~---------~~~yVGHpl--------~d~i~~---------~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~ 208 (381)
T COG0763 155 GL---------PCTYVGHPL--------ADEIPL---------LPDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPP 208 (381)
T ss_pred CC---------CeEEeCChh--------hhhccc---------cccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHH
Confidence 11 123445422 111111 112234677776 3 3444544444 3445566778
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHc
Q 044635 357 KLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVA 436 (831)
Q Consensus 357 ~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~A 436 (831)
.++|++++.+++|+++ ++.-..+ ..++.++.+ ....-. ..+..+ +...+....+.+|
T Consensus 209 f~~a~~~l~~~~~~~~----~vlp~~~-----~~~~~~~~~---~~~~~~-------~~~~~~----~~~~~~~~a~~~a 265 (381)
T COG0763 209 FVQAAQELKARYPDLK----FVLPLVN-----AKYRRIIEE---ALKWEV-------AGLSLI----LIDGEKRKAFAAA 265 (381)
T ss_pred HHHHHHHHHhhCCCce----EEEecCc-----HHHHHHHHH---Hhhccc-------cCceEE----ecCchHHHHHHHh
Confidence 8899999999999987 5543322 223333322 211110 001222 2244788889999
Q ss_pred CEeEECCCccCCCCCCCCCceEEEe-----------------cccccccccCCCceeC-----CCCHHHHHHHHHHHhcC
Q 044635 437 ECCLVTAVRDGSEPSSPKKSMLVVS-----------------EFIGCSPSLSGAIRVN-----PWNIDAVSDAMDSALEM 494 (831)
Q Consensus 437 Dv~vvtS~~eGma~~~~~~g~lVlS-----------------e~~G~~~~l~~allVn-----P~d~~~~A~ai~~aL~m 494 (831)
|+.+..|=.=.+-+ +-.+.|.|++ .+++....+-+-.+|+ --.++.+|+++...+..
T Consensus 266 D~al~aSGT~tLE~-aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~ 344 (381)
T COG0763 266 DAALAASGTATLEA-ALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLN 344 (381)
T ss_pred hHHHHhccHHHHHH-HHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcC
Confidence 99998884322200 0113455554 2333222222222221 12378999999999876
Q ss_pred CHH--HHHHHHHHHhhhhccCCHHHHHHHHH
Q 044635 495 ADQ--EKQLRHEKHYRYVSTHDVGYWARSFL 523 (831)
Q Consensus 495 ~~~--er~~r~~~~~~~v~~~~~~~W~~~~l 523 (831)
+.. +..+....+++++.+..+..-+.+.+
T Consensus 345 ~~~~~~~~~~~~~l~~~l~~~~~~e~aA~~v 375 (381)
T COG0763 345 GDRREALKEKFRELHQYLREDPASEIAAQAV 375 (381)
T ss_pred hHhHHHHHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 622 22334445666666653444444443
|
|
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=89.47 E-value=5.2 Score=45.53 Aligned_cols=135 Identities=15% Similarity=0.118 Sum_probs=74.2
Q ss_pred cEEEEeccC-cccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhc---------c
Q 044635 339 KVMLLGVDD-MDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQ---------T 408 (831)
Q Consensus 339 ~~iil~VdR-ld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~---------~ 408 (831)
..+++.-.| -+..++++..++|++++.++ |++ .++....+. .+++.+++.+.+. .++. .
T Consensus 207 ~lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~----~~v~~~~~~----~~~~~~~~~l~~~--g~~~~~~~~~~~~~ 275 (396)
T TIGR03492 207 RIALLPGSRPPEAYRNLKLLLRALEALPDS-QPF----VFLAAIVPS----LSLEKLQAILEDL--GWQLEGSSEDQTSL 275 (396)
T ss_pred EEEEECCCCHHHHHccHHHHHHHHHHHhhC-CCe----EEEEEeCCC----CCHHHHHHHHHhc--CceecCCccccchh
Confidence 345667777 45667888999999998655 543 355544332 2333444333221 0000 0
Q ss_pred CCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCC---ccCCCCCCCCCceEEEeccccc------ccc---c-CCCce
Q 044635 409 FGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAV---RDGSEPSSPKKSMLVVSEFIGC------SPS---L-SGAIR 475 (831)
Q Consensus 409 ~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~---~eGma~~~~~~g~lVlSe~~G~------~~~---l-~~all 475 (831)
|.. .++.++. ...+..++|+.||++|..|= -|-+++ +.|.|+.-+-+. .+. + .+++.
T Consensus 276 ~~~---~~~~v~~---~~~~~~~~l~~ADlvI~rSGt~T~E~a~l----g~P~Ilip~~~~q~na~~~~~~~~l~g~~~~ 345 (396)
T TIGR03492 276 FQK---GTLEVLL---GRGAFAEILHWADLGIAMAGTATEQAVGL----GKPVIQLPGKGPQFTYGFAEAQSRLLGGSVF 345 (396)
T ss_pred hcc---CceEEEe---chHhHHHHHHhCCEEEECcCHHHHHHHHh----CCCEEEEeCCCCHHHHHHHHhhHhhcCCEEe
Confidence 000 0122221 24578999999999999773 122222 334555432111 011 1 34555
Q ss_pred eCCCCHHHHHHHHHHHhcC
Q 044635 476 VNPWNIDAVSDAMDSALEM 494 (831)
Q Consensus 476 VnP~d~~~~A~ai~~aL~m 494 (831)
+...+++.++++|.++|+.
T Consensus 346 l~~~~~~~l~~~l~~ll~d 364 (396)
T TIGR03492 346 LASKNPEQAAQVVRQLLAD 364 (396)
T ss_pred cCCCCHHHHHHHHHHHHcC
Confidence 5567789999999999874
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=89.24 E-value=8.9 Score=38.13 Aligned_cols=93 Identities=18% Similarity=0.251 Sum_probs=46.6
Q ss_pred HHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhH-hcCCCeEEEEcCeEEEEEeCCCCHHHHHH
Q 044635 667 AEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESV-LANEPVTVKSGQNLVEVKPQGVNKGLVAK 745 (831)
Q Consensus 667 v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~-l~~~~v~v~~g~~~vEV~p~gvnKG~al~ 745 (831)
+..+++...+ ++..+..--+...|+ .|+++++.++=. .....+.....-.++||-|. +|-.=.+
T Consensus 50 v~~iL~~L~~---------~gv~lavASRt~~P~----~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~g--sK~~Hf~ 114 (169)
T PF12689_consen 50 VPEILQELKE---------RGVKLAVASRTDEPD----WARELLKLLEIDDADGDGVPLIEYFDYLEIYPG--SKTTHFR 114 (169)
T ss_dssp HHHHHHHHHH---------CT--EEEEE--S-HH----HHHHHHHHTT-C----------CCECEEEESSS---HHHHHH
T ss_pred HHHHHHHHHH---------CCCEEEEEECCCChH----HHHHHHHhcCCCccccccccchhhcchhheecC--chHHHHH
Confidence 5556665543 334444444443343 356666655322 01112223333456899886 9999999
Q ss_pred HHHHHhhhcCCCcccEEEEcCCchhHHHHHHc
Q 044635 746 RLLSTMQEREMLPDFVLCVGDDRSDEDMFEVI 777 (831)
Q Consensus 746 ~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a 777 (831)
.|.+.. |++++.++.|=|.....+--+.+
T Consensus 115 ~i~~~t---gI~y~eMlFFDDe~~N~~~v~~l 143 (169)
T PF12689_consen 115 RIHRKT---GIPYEEMLFFDDESRNIEVVSKL 143 (169)
T ss_dssp HHHHHH------GGGEEEEES-HHHHHHHHTT
T ss_pred HHHHhc---CCChhHEEEecCchhcceeeEec
Confidence 999987 99999999998865443433334
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=89.11 E-value=0.9 Score=48.62 Aligned_cols=69 Identities=9% Similarity=0.043 Sum_probs=52.7
Q ss_pred HHHHHHHHHHhhhcCCC-cccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC-------------------
Q 044635 741 GLVAKRLLSTMQEREML-PDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK------------------- 800 (831)
Q Consensus 741 G~al~~Ll~~l~~~g~~-~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~------------------- 800 (831)
-..+...++.+ |+. ++++++|||+.+|+.+-+.+|.. .++|+.|..
T Consensus 161 p~~~~~a~~~l---~~~~~~e~l~IGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~~~~~~ 226 (267)
T PRK13478 161 PWMALKNAIEL---GVYDVAACVKVDDTVPGIEEGLNAGMW-----------TVGVILSGNELGLSEEEYQALSAAELAA 226 (267)
T ss_pred hHHHHHHHHHc---CCCCCcceEEEcCcHHHHHHHHHCCCE-----------EEEEccCcccccCCHHHHHhcCHHHHHH
Confidence 45677777777 875 69999999999999999998742 356666632
Q ss_pred ----------CcccceEeCChhHHHHHHHHHHh
Q 044635 801 ----------PSKAKYYLDDTVEIVRLMQGLAC 823 (831)
Q Consensus 801 ----------~s~A~y~l~d~~eV~~~L~~L~~ 823 (831)
...|.+++++..++..+|+.+..
T Consensus 227 ~~~~~~~~l~~~~a~~vi~~~~~l~~~l~~~~~ 259 (267)
T PRK13478 227 RRERARARLRAAGAHYVIDTIADLPAVIADIEA 259 (267)
T ss_pred HHHHHHHHHHHcCCCeehhhHHHHHHHHHHHHH
Confidence 24588999999999988876543
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.10 E-value=0.48 Score=49.04 Aligned_cols=38 Identities=8% Similarity=0.008 Sum_probs=30.6
Q ss_pred CCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 593 SPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 593 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
.+.+.+.+.++.+.+ .|.+++|+||-....++++...+
T Consensus 77 ~l~~ga~elv~~lk~-~G~~v~iiSgg~~~lv~~ia~~l 114 (212)
T COG0560 77 RLTPGAEELVAALKA-AGAKVVIISGGFTFLVEPIAERL 114 (212)
T ss_pred cCCccHHHHHHHHHH-CCCEEEEEcCChHHHHHHHHHHh
Confidence 346778888888876 69999999999988777777654
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=88.76 E-value=0.45 Score=52.98 Aligned_cols=47 Identities=19% Similarity=0.299 Sum_probs=37.5
Q ss_pred CceeEEecCCCccCCCCC--------CCCCCCHHHHHHHHHHhhcCCCeEEEECCC
Q 044635 572 TTRAILLDYDGTLMPQAS--------IDKSPNSKTIDILNSLCRDKNNMVFLVSAK 619 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~--------~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR 619 (831)
+++++|+|.||||....+ ....+-|.+.++|..|.+ .|..++|+|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~-~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQK-AGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHh-CCCeEEEEECC
Confidence 468999999999998432 123456889999999965 68999999984
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=88.12 E-value=0.057 Score=56.56 Aligned_cols=53 Identities=13% Similarity=0.282 Sum_probs=39.6
Q ss_pred cCceeEEecCCCccCCCCC-----------------------CCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhH
Q 044635 571 TTTRAILLDYDGTLMPQAS-----------------------IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTL 624 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~-----------------------~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l 624 (831)
-++..+++|+|+|+++... ....+-|.+++.++.+.+ .|..|+++|||+...-
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~-~G~~V~~iT~R~~~~r 145 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARS-RGVKVFFITGRPESQR 145 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHH-TTEEEEEEEEEETTCH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHH-CCCeEEEEecCCchhH
Confidence 4678999999999986210 011234668899999877 6999999999997743
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=87.75 E-value=0.5 Score=48.12 Aligned_cols=34 Identities=12% Similarity=0.127 Sum_probs=26.9
Q ss_pred HHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 596 SKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 596 ~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
+.+.++|+.|.+ . ..++|+|+.....++.++..+
T Consensus 71 pg~~e~L~~L~~-~-~~~~IvS~~~~~~~~~~l~~~ 104 (205)
T PRK13582 71 PGAVEFLDWLRE-R-FQVVILSDTFYEFAGPLMRQL 104 (205)
T ss_pred CCHHHHHHHHHh-c-CCEEEEeCCcHHHHHHHHHHc
Confidence 446678888866 4 789999999999888887654
|
|
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=86.82 E-value=0.97 Score=46.01 Aligned_cols=59 Identities=22% Similarity=0.182 Sum_probs=43.5
Q ss_pred hcCceeEEecCCCccCCCCCCCC----CCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCC
Q 044635 570 RTTTRAILLDYDGTLMPQASIDK----SPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSP 630 (831)
Q Consensus 570 ~s~~rli~~D~DGTLl~~~~~~~----~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 630 (831)
+..++++++|+|+||++..+... ..-|.+.+.|+.+.+ .-.|+|-|..+...+...+..
T Consensus 18 ~~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~--~feIvVwTAa~~~ya~~~l~~ 80 (195)
T TIGR02245 18 REGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYE--DYDIVIWSATSMKWIEIKMTE 80 (195)
T ss_pred CCCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHh--CCEEEEEecCCHHHHHHHHHH
Confidence 35679999999999998432121 124678889998876 788999888888777776654
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=86.78 E-value=0.56 Score=45.85 Aligned_cols=56 Identities=20% Similarity=0.280 Sum_probs=38.8
Q ss_pred eeEEecCCCccCCCCCCCC----------------CCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 574 RAILLDYDGTLMPQASIDK----------------SPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 574 rli~~D~DGTLl~~~~~~~----------------~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
|++++|+||||+....... ..-|.+.+.|+.+.+ ...++|.|..+...+...+..+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~--~~ev~i~T~~~~~ya~~v~~~l 72 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSK--HYEVVIWTSASEEYAEPVLDAL 72 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHH--HCEEEEE-SS-HHHHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHH--hceEEEEEeehhhhhhHHHHhh
Confidence 6899999999997432211 124678888998855 6899999999988877777655
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=86.76 E-value=1.2 Score=49.32 Aligned_cols=48 Identities=27% Similarity=0.330 Sum_probs=35.5
Q ss_pred eEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcC----CCeEEEE---CCCCHhhHHHH
Q 044635 575 AILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDK----NNMVFLV---SAKSRKTLAEW 627 (831)
Q Consensus 575 li~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~----g~~V~I~---SGR~~~~l~~~ 627 (831)
.++||+||||.. ...+-+...++|+.|.. . +..++++ +|++.....+.
T Consensus 2 ~~ifD~DGvL~~----g~~~i~ga~eal~~L~~-~~~~~g~~~~flTNn~g~s~~~~~~~ 56 (321)
T TIGR01456 2 GFAFDIDGVLFR----GKKPIAGASDALRRLNR-NQGQLKIPYIFLTNGGGFSERARAEE 56 (321)
T ss_pred EEEEeCcCceEC----CccccHHHHHHHHHHhc-cccccCCCEEEEecCCCCCHHHHHHH
Confidence 589999999997 34457999999999976 4 5666655 57776664443
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=86.72 E-value=1.5 Score=45.28 Aligned_cols=21 Identities=10% Similarity=0.158 Sum_probs=18.4
Q ss_pred cEEEEcCCchhHHHHHHcchh
Q 044635 760 FVLCVGDDRSDEDMFEVIISS 780 (831)
Q Consensus 760 ~vla~GD~~NDe~Mf~~a~~~ 780 (831)
...+.|||.||.+||+.+++.
T Consensus 177 ~~~aYsDS~~D~pmL~~a~~~ 197 (210)
T TIGR01545 177 LYSGYSDSKQDNPLLAFCEHR 197 (210)
T ss_pred heEEecCCcccHHHHHhCCCc
Confidence 457999999999999999863
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=86.64 E-value=1.5 Score=46.30 Aligned_cols=64 Identities=14% Similarity=0.102 Sum_probs=47.8
Q ss_pred HHHHHHHHHHhhhcCCC-cccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC-------------------
Q 044635 741 GLVAKRLLSTMQEREML-PDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK------------------- 800 (831)
Q Consensus 741 G~al~~Ll~~l~~~g~~-~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~------------------- 800 (831)
-......++.+ |+. ++++++|||+.+|+.+=+.+|.. .++|+-|..
T Consensus 159 p~~~~~a~~~l---~~~~~~~~l~IGDs~~Di~aA~~aGi~-----------~i~v~~g~~~~~~~~~~~~~~~~~~~~~ 224 (253)
T TIGR01422 159 PWMALKNAIEL---GVYDVAACVKVGDTVPDIEEGRNAGMW-----------TVGLILSSNELGLSEEEYRALDPAELEA 224 (253)
T ss_pred HHHHHHHHHHc---CCCCchheEEECCcHHHHHHHHHCCCe-----------EEEEecCCcccCCCHHHHHhCCHHHHHH
Confidence 45667777777 874 89999999999999999998852 356666642
Q ss_pred ----------CcccceEeCChhHHHHHH
Q 044635 801 ----------PSKAKYYLDDTVEIVRLM 818 (831)
Q Consensus 801 ----------~s~A~y~l~d~~eV~~~L 818 (831)
...|++++++..++..+|
T Consensus 225 ~~~~~~~~l~~~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 225 RRAEATARLKAAGAHYVIDTLAELPAVI 252 (253)
T ss_pred HHHHHHHHHHhcCCCEehhcHHHHHHhh
Confidence 235788888888876654
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=86.51 E-value=0.69 Score=48.47 Aligned_cols=81 Identities=22% Similarity=0.284 Sum_probs=51.9
Q ss_pred EeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchh---cCCCCCCCCCceEEEE--eCC--CCcccce
Q 044635 734 KPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISS---MAGPSIAPRAEVFACT--VGR--KPSKAKY 806 (831)
Q Consensus 734 ~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~---~~~~~~~~~~~~~~v~--vG~--~~s~A~y 806 (831)
-|.+.-||..++.+++.....|.+.+.|+++||+.||.-....++.. ++... |+.. +.+ ..-+|+-
T Consensus 145 C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~-------~~l~~~i~~~~~~~~a~v 217 (234)
T PF06888_consen 145 CPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPRKG-------YPLHKLIQKNPGEVKAEV 217 (234)
T ss_pred CCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecCCC-------ChHHHHHhcCCCcceeEE
Confidence 36678999999999987545578889999999999998766554321 11110 0000 001 1234444
Q ss_pred Ee-CChhHHHHHHHHH
Q 044635 807 YL-DDTVEIVRLMQGL 821 (831)
Q Consensus 807 ~l-~d~~eV~~~L~~L 821 (831)
.. .+-.|+.+.|+.|
T Consensus 218 ~~W~~g~~i~~~l~~~ 233 (234)
T PF06888_consen 218 VPWSSGEEILEILLQL 233 (234)
T ss_pred EecCCHHHHHHHHHhh
Confidence 33 6788888888876
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=86.38 E-value=2.2 Score=45.38 Aligned_cols=59 Identities=19% Similarity=0.236 Sum_probs=44.7
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
...+|++|+|.||+.......-+.+.+.+.|.+|.+ .|..+++=|--+.+-+..-+..+
T Consensus 121 ~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~Lk~-~g~vLvLWSyG~~eHV~~sl~~~ 179 (297)
T PF05152_consen 121 PPHVIVFDLDSTLITDEGDVRIRDPAVYDSLRELKE-QGCVLVLWSYGNREHVRHSLKEL 179 (297)
T ss_pred CCcEEEEECCCcccccCCccccCChHHHHHHHHHHH-cCCEEEEecCCCHHHHHHHHHHh
Confidence 456999999999998543344578999999999987 47777777777776666655543
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=86.29 E-value=1.3 Score=44.17 Aligned_cols=40 Identities=23% Similarity=0.267 Sum_probs=32.7
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchh
Q 044635 735 PQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISS 780 (831)
Q Consensus 735 p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~ 780 (831)
+.|..|+..++.+.+.. ++.++++||+.||+.|.+.++..
T Consensus 145 ~~g~~K~~~~~~~~~~~------~~~~i~iGD~~~D~~aa~~~d~~ 184 (188)
T TIGR01489 145 PCGCCKGKVIHKLSEPK------YQHIIYIGDGVTDVCPAKLSDVV 184 (188)
T ss_pred CCCCCHHHHHHHHHhhc------CceEEEECCCcchhchHhcCCcc
Confidence 55678988888887641 68899999999999999888654
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=86.17 E-value=1.1 Score=46.13 Aligned_cols=35 Identities=14% Similarity=0.111 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 596 SKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 596 ~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
+.+.++|+.|.+ .|..++|+||.....+..++..+
T Consensus 96 ~g~~~~l~~l~~-~g~~~~i~S~~~~~~~~~~l~~~ 130 (226)
T PRK13222 96 PGVKETLAALKA-AGYPLAVVTNKPTPFVAPLLEAL 130 (226)
T ss_pred CCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHc
Confidence 345566666755 48889999999888887777643
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.07 E-value=1 Score=54.61 Aligned_cols=67 Identities=21% Similarity=0.261 Sum_probs=53.0
Q ss_pred EEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----Ccccc
Q 044635 730 LVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAK 805 (831)
Q Consensus 730 ~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~ 805 (831)
+=|+.|.+ |...++++.+. | ..|+.+||+.||-+.+..+. ++++||.. ...|+
T Consensus 580 ~AellPed--K~~~V~~l~~~----g---~~VamVGDGINDAPALA~Ad--------------VGiAmG~GtDvA~eaAD 636 (713)
T COG2217 580 RAELLPED--KAEIVRELQAE----G---RKVAMVGDGINDAPALAAAD--------------VGIAMGSGTDVAIEAAD 636 (713)
T ss_pred eccCCcHH--HHHHHHHHHhc----C---CEEEEEeCCchhHHHHhhcC--------------eeEeecCCcHHHHHhCC
Confidence 45677775 99888888754 3 56999999999999999986 68888874 46788
Q ss_pred eEe--CChhHHHHHHH
Q 044635 806 YYL--DDTVEIVRLMQ 819 (831)
Q Consensus 806 y~l--~d~~eV~~~L~ 819 (831)
.++ +|...|..+++
T Consensus 637 vvL~~~dL~~v~~ai~ 652 (713)
T COG2217 637 VVLMRDDLSAVPEAID 652 (713)
T ss_pred EEEecCCHHHHHHHHH
Confidence 887 57888877765
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=85.89 E-value=1.3 Score=44.96 Aligned_cols=36 Identities=14% Similarity=0.056 Sum_probs=28.4
Q ss_pred CHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 595 NSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 595 s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
.+.+.+.|+.+.+ .|..++|+||.....++.+.+.+
T Consensus 89 ~~~~~~~l~~l~~-~g~~v~ivS~s~~~~v~~~~~~l 124 (202)
T TIGR01490 89 YPEARDLIRWHKA-EGHTIVLVSASLTILVKPLARIL 124 (202)
T ss_pred cHHHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHHHc
Confidence 4566777888765 58999999999988888887654
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=84.65 E-value=3 Score=46.97 Aligned_cols=72 Identities=10% Similarity=0.089 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC---CcccceEeCChhHH-H
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK---PSKAKYYLDDTVEI-V 815 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~---~s~A~y~l~d~~eV-~ 815 (831)
+.......++.+ |+.++++++|||+.+|+.+-+.+|.. .++|+-|.. ...|++++++.+++ +
T Consensus 274 ~Peifl~A~~~l---gl~Peecl~IGDS~~DIeAAk~AGm~-----------~IgV~~~~~~~~l~~Ad~iI~s~~EL~~ 339 (381)
T PLN02575 274 DPEMFIYAAQLL---NFIPERCIVFGNSNQTVEAAHDARMK-----------CVAVASKHPIYELGAADLVVRRLDELSI 339 (381)
T ss_pred CHHHHHHHHHHc---CCCcccEEEEcCCHHHHHHHHHcCCE-----------EEEECCCCChhHhcCCCEEECCHHHHHH
Confidence 456777888887 89999999999999999988888742 234433221 23588999999998 6
Q ss_pred HHHHHHHhhh
Q 044635 816 RLMQGLACVA 825 (831)
Q Consensus 816 ~~L~~L~~~~ 825 (831)
..|+.|+..-
T Consensus 340 ~~l~~l~~~~ 349 (381)
T PLN02575 340 VDLKNLADIE 349 (381)
T ss_pred HHHhhhhhcC
Confidence 6777777654
|
|
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=84.54 E-value=2 Score=42.33 Aligned_cols=57 Identities=12% Similarity=0.120 Sum_probs=42.4
Q ss_pred ceeEEecCCCccCCCCCCCC---------------------CCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 573 TRAILLDYDGTLMPQASIDK---------------------SPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~---------------------~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
++.+++|+|+||+....... ..-|.+.+.|..|.+ ...++|.|.-+...+...+..+
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~--~yei~I~Ts~~~~yA~~il~~l 78 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSK--WYELVIFTASLEEYADPVLDIL 78 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHh--cCEEEEEcCCcHHHHHHHHHHH
Confidence 46899999999997432111 023678899999975 4889999988888888877655
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=83.88 E-value=1.7 Score=55.58 Aligned_cols=149 Identities=17% Similarity=0.207 Sum_probs=88.9
Q ss_pred CCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCceEEEcCCcCCccHHHHHHHH
Q 044635 591 DKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPV 670 (831)
Q Consensus 591 ~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~i 670 (831)
...+-+++.++++++.+ .|++|+++||........+.+.+ +++..+... .. .. .
T Consensus 644 ~Dp~r~~v~~aI~~l~~-aGIkv~MiTGD~~~tA~~iA~~~---Gi~~~~~~~--~~-~~-----------~-------- 697 (1053)
T TIGR01523 644 YDPPRNESAGAVEKCHQ-AGINVHMLTGDFPETAKAIAQEV---GIIPPNFIH--DR-DE-----------I-------- 697 (1053)
T ss_pred ecCCchhHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHc---CCCCccccc--cc-cc-----------c--------
Confidence 44677899999999977 59999999999999998888754 333222110 00 00 0
Q ss_pred HHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHH
Q 044635 671 MKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLST 750 (831)
Q Consensus 671 l~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~ 750 (831)
... .+..-...+ ... .++ +.+..... .| +-.+.|. .|...++.+.+.
T Consensus 698 -------~~~---------~vitG~~l~-~l~---~~~----l~~~~~~~--~V-----~ar~sP~--~K~~iV~~lq~~ 744 (1053)
T TIGR01523 698 -------MDS---------MVMTGSQFD-ALS---DEE----VDDLKALC--LV-----IARCAPQ--TKVKMIEALHRR 744 (1053)
T ss_pred -------ccc---------eeeehHHhh-hcC---HHH----HHHHhhcC--eE-----EEecCHH--HHHHHHHHHHhc
Confidence 000 000000000 000 011 22222211 11 2234454 599988887654
Q ss_pred hhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCC-C----CcccceEeC--ChhHHHHHHH
Q 044635 751 MQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGR-K----PSKAKYYLD--DTVEIVRLMQ 819 (831)
Q Consensus 751 l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~-~----~s~A~y~l~--d~~eV~~~L~ 819 (831)
| ..|.++||+.||.+|++.++ ++|+||. . +..|++++. +-..+.+++.
T Consensus 745 ----g---~~Vam~GDGvNDapaLk~Ad--------------VGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~ 799 (1053)
T TIGR01523 745 ----K---AFCAMTGDGVNDSPSLKMAN--------------VGIAMGINGSDVAKDASDIVLSDDNFASILNAIE 799 (1053)
T ss_pred ----C---CeeEEeCCCcchHHHHHhCC--------------ccEecCCCccHHHHHhcCEEEecCCHHHHHHHHH
Confidence 3 46899999999999999997 6888883 2 457888884 4666666553
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=83.07 E-value=1.3 Score=44.03 Aligned_cols=37 Identities=3% Similarity=-0.048 Sum_probs=29.4
Q ss_pred CCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 594 PNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 594 ~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
+.+.+.++|+.|.+ .|..++|+|+.....++.++...
T Consensus 73 l~~g~~~ll~~l~~-~g~~~~i~S~~~~~~~~~~l~~~ 109 (188)
T TIGR01489 73 IDPGFKEFIAFIKE-HGIDFIVISDGNDFFIDPVLEGI 109 (188)
T ss_pred CCccHHHHHHHHHH-cCCcEEEEeCCcHHHHHHHHHHc
Confidence 44568888888865 58999999999988888877653
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=82.40 E-value=1.4 Score=45.22 Aligned_cols=36 Identities=11% Similarity=0.125 Sum_probs=28.9
Q ss_pred CCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 594 PNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 594 ~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
+.+.+.+.|+.+.+ . ..++|+||-....+..+++.+
T Consensus 69 l~pga~ell~~lk~-~-~~~~IVS~~~~~~~~~il~~l 104 (203)
T TIGR02137 69 PLEGAVEFVDWLRE-R-FQVVILSDTFYEFSQPLMRQL 104 (203)
T ss_pred CCccHHHHHHHHHh-C-CeEEEEeCChHHHHHHHHHHc
Confidence 45677888888876 3 499999999999888887765
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=82.18 E-value=2.9 Score=43.48 Aligned_cols=69 Identities=12% Similarity=0.015 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC--CcccceEeCChhHHHHH
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK--PSKAKYYLDDTVEIVRL 817 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~--~s~A~y~l~d~~eV~~~ 817 (831)
+-...+++++.+ |++++++++|||+.+|+..=+.+|.. .+++|+.|.. ...|...+.+.+++.++
T Consensus 151 ~p~~~~~~~~~~---~~~p~~~l~igDs~~di~aA~~aG~~----------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 217 (224)
T PRK14988 151 DQRLWQAVAEHT---GLKAERTLFIDDSEPILDAAAQFGIR----------YCLGVTNPDSGIAEKQYQRHPSLNDYRRL 217 (224)
T ss_pred CHHHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHcCCe----------EEEEEeCCCCCccchhccCCCcHHHHHHH
Confidence 356778888888 99999999999999998877777642 1234444443 23444555677777777
Q ss_pred HHHH
Q 044635 818 MQGL 821 (831)
Q Consensus 818 L~~L 821 (831)
|+.|
T Consensus 218 ~~~l 221 (224)
T PRK14988 218 IPSL 221 (224)
T ss_pred hhhh
Confidence 7765
|
|
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=82.10 E-value=26 Score=38.72 Aligned_cols=130 Identities=15% Similarity=0.122 Sum_probs=78.2
Q ss_pred cCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCC
Q 044635 346 DDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLK 425 (831)
Q Consensus 346 dRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~ 425 (831)
-.-|++-+....|+++.+... .+ +.++ ..-+ .+...++|.++|.+.+.++ ||.. .+..++..+|
T Consensus 192 NSgd~sNnHieaL~~L~~~~~--~~----~kIi--vPLs--Yg~~n~~Yi~~V~~~~~~l---F~~~---~~~iL~e~mp 255 (360)
T PF07429_consen 192 NSGDPSNNHIEALEALKQQFG--DD----VKII--VPLS--YGANNQAYIQQVIQAGKEL---FGAE---NFQILTEFMP 255 (360)
T ss_pred CCCCCCccHHHHHHHHHHhcC--CC----eEEE--EECC--CCCchHHHHHHHHHHHHHh---cCcc---ceeEhhhhCC
Confidence 346777777777766655321 22 2222 1112 3333566777777776654 4432 3556788999
Q ss_pred HHHHHHHHHHcCEeEECCCcc-CCCC---CCCCCceEEEeccccccccc-CCCcee----CCCCHHHHHHHHHHH
Q 044635 426 FYERIAYYVVAECCLVTAVRD-GSEP---SSPKKSMLVVSEFIGCSPSL-SGAIRV----NPWNIDAVSDAMDSA 491 (831)
Q Consensus 426 ~~el~aly~~ADv~vvtS~~e-Gma~---~~~~~g~lVlSe~~G~~~~l-~~allV----nP~d~~~~A~ai~~a 491 (831)
.+|+.++++.+|+.++...|. ||+- --..+.++++|+-.-....+ ..++.| +.-|...+++|=+++
T Consensus 256 f~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~~~np~~~~l~~~~ipVlf~~d~L~~~~v~ea~rql 330 (360)
T PF07429_consen 256 FDEYLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLSRDNPFWQDLKEQGIPVLFYGDELDEALVREAQRQL 330 (360)
T ss_pred HHHHHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEecCChHHHHHHhCCCeEEeccccCCHHHHHHHHHHH
Confidence 999999999999999999875 7720 01225688888876555555 334433 344455555544433
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=81.98 E-value=2.1 Score=41.98 Aligned_cols=60 Identities=15% Similarity=0.106 Sum_probs=45.6
Q ss_pred hcCceeEEecCCCccCCCCCCC------C--------------------------CCCHHHHHHHHHHhhcCCCeEEEEC
Q 044635 570 RTTTRAILLDYDGTLMPQASID------K--------------------------SPNSKTIDILNSLCRDKNNMVFLVS 617 (831)
Q Consensus 570 ~s~~rli~~D~DGTLl~~~~~~------~--------------------------~~s~~~~~~L~~L~~d~g~~V~I~S 617 (831)
+.++..+++|+|.||++..... . .+-|.+.+.|++|.+ +..++|+|
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~--~yel~I~T 80 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASK--LYEMHVYT 80 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHh--hcEEEEEe
Confidence 3578899999999999843210 0 013578899999974 68999999
Q ss_pred CCCHhhHHHHhCCC
Q 044635 618 AKSRKTLAEWFSPC 631 (831)
Q Consensus 618 GR~~~~l~~~~~~~ 631 (831)
..+...+...+..+
T Consensus 81 ~~~~~yA~~vl~~l 94 (156)
T TIGR02250 81 MGTRAYAQAIAKLI 94 (156)
T ss_pred CCcHHHHHHHHHHh
Confidence 99999888887766
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=81.92 E-value=5.5 Score=50.62 Aligned_cols=40 Identities=25% Similarity=0.341 Sum_probs=30.9
Q ss_pred EEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcc
Q 044635 733 VKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVII 778 (831)
Q Consensus 733 V~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~ 778 (831)
.+..-.-|+..++.+.+. ....++||||+.||..|++.|.
T Consensus 775 CR~sPlQKA~Vv~lVk~~------~~~~TLAIGDGANDVsMIQ~Ah 814 (1151)
T KOG0206|consen 775 CRVSPLQKALVVKLVKKG------LKAVTLAIGDGANDVSMIQEAH 814 (1151)
T ss_pred ccCCHHHHHHHHHHHHhc------CCceEEEeeCCCccchheeeCC
Confidence 344444599999998443 2456999999999999999875
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=81.72 E-value=0.72 Score=46.19 Aligned_cols=37 Identities=11% Similarity=-0.083 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
+-...++.++++ |.+++++++|||+.+|++.=+.+|.
T Consensus 144 ~p~~~~~~~~~~---~~~~~~~l~igDs~~di~aA~~aG~ 180 (188)
T PRK10725 144 APDTFLRCAQLM---GVQPTQCVVFEDADFGIQAARAAGM 180 (188)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeccHhhHHHHHHCCC
Confidence 456788888888 8899999999999999999888874
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=81.16 E-value=4.1 Score=43.50 Aligned_cols=69 Identities=10% Similarity=0.140 Sum_probs=50.6
Q ss_pred HHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEeCChhHHHH
Q 044635 741 GLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLDDTVEIVR 816 (831)
Q Consensus 741 G~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~d~~eV~~ 816 (831)
-......++++ |++++.+++|||+.+|+.+=+.+|.. +++|+ |.. ...|++++++..++..
T Consensus 168 Pe~~~~a~~~l---~~~p~~~l~IgDs~~Di~aA~~aG~~-----------~i~v~-g~~~~~~l~~ad~vi~~~~el~~ 232 (260)
T PLN03243 168 PEMFMYAAERL---GFIPERCIVFGNSNSSVEAAHDGCMK-----------CVAVA-GKHPVYELSAGDLVVRRLDDLSV 232 (260)
T ss_pred HHHHHHHHHHh---CCChHHeEEEcCCHHHHHHHHHcCCE-----------EEEEe-cCCchhhhccCCEEeCCHHHHHH
Confidence 46677888887 99999999999999999999998752 24554 432 2468899999888764
Q ss_pred H-HHHHHhh
Q 044635 817 L-MQGLACV 824 (831)
Q Consensus 817 ~-L~~L~~~ 824 (831)
. ++.|++.
T Consensus 233 ~~~~~~~~~ 241 (260)
T PLN03243 233 VDLKNLSDL 241 (260)
T ss_pred HHHhhhhcc
Confidence 4 3445443
|
|
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=80.82 E-value=4.3 Score=46.16 Aligned_cols=75 Identities=16% Similarity=0.258 Sum_probs=56.2
Q ss_pred CCHHHHHHHHHhcCceeEEecCCCccCCCCC-------------CCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHH
Q 044635 559 LSMEHIVSAYKRTTTRAILLDYDGTLMPQAS-------------IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLA 625 (831)
Q Consensus 559 l~~~~~~~~y~~s~~rli~~D~DGTLl~~~~-------------~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~ 625 (831)
-.+..++.|-....+|.+++|+|+||..-.- ..+.+-.+..+.+..|.+ .|..++|||=.....+.
T Consensus 208 ~ei~Sl~~A~~g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~k-qGVlLav~SKN~~~da~ 286 (574)
T COG3882 208 DEIASLLAAMSGKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKK-QGVLLAVCSKNTEKDAK 286 (574)
T ss_pred HHHHHHHHHhhCcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHh-ccEEEEEecCCchhhHH
Confidence 3456677777777899999999999996210 112233567778888876 69999999999999999
Q ss_pred HHhCCCCCc
Q 044635 626 EWFSPCENL 634 (831)
Q Consensus 626 ~~~~~~~~~ 634 (831)
+.|...|..
T Consensus 287 evF~khp~M 295 (574)
T COG3882 287 EVFRKHPDM 295 (574)
T ss_pred HHHhhCCCe
Confidence 999876543
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 831 | ||||
| 1uqu_A | 482 | Trehalose-6-Phosphate From E. Coli Bound With Udp-G | 1e-52 | ||
| 2wtx_A | 474 | Insight Into The Mechanism Of Enzymatic Glycosyltra | 1e-52 | ||
| 1gz5_A | 456 | Trehalose-6-Phosphate Synthase. Otsa Length = 456 | 1e-51 | ||
| 3t5t_A | 496 | Vall From Streptomyces Hygroscopicus In Apo Form Le | 8e-13 | ||
| 4f96_B | 497 | Crystal Structure Of Vlde, The Pseudo-Glycosyltrans | 9e-13 | ||
| 3t7d_A | 497 | Vall From Streptomyces Hygroscopicus In Complex Wit | 8e-12 |
| >pdb|1UQU|A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. Length = 482 | Back alignment and structure |
|
| >pdb|2WTX|A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase Length = 474 | Back alignment and structure |
|
| >pdb|1GZ5|A Chain A, Trehalose-6-Phosphate Synthase. Otsa Length = 456 | Back alignment and structure |
|
| >pdb|3T5T|A Chain A, Vall From Streptomyces Hygroscopicus In Apo Form Length = 496 | Back alignment and structure |
|
| >pdb|4F96|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase, In Complex With Gdp Length = 497 | Back alignment and structure |
|
| >pdb|3T7D|A Chain A, Vall From Streptomyces Hygroscopicus In Complex With Trehalose Length = 497 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 831 | |||
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 0.0 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 0.0 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 2e-67 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 1e-09 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 4e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-06 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 1e-07 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 5e-07 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 4e-05 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 7e-05 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 1e-04 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 2e-04 |
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* Length = 482 | Back alignment and structure |
|---|
Score = 607 bits (1568), Expect = 0.0
Identities = 136/519 (26%), Positives = 247/519 (47%), Gaps = 50/519 (9%)
Query: 61 RIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVN 120
R+++V+N++ + + + G L + + L ++ G E N
Sbjct: 3 RLVVVSNRIAPPDEHAAS-AGG---------LAVGILGAL--KAAGGLWFGWSGET--GN 48
Query: 121 EQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLW 180
E + ++ L YY+ F LWP FHY L L +F R W
Sbjct: 49 EDQPLKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLV-----QFQRPAW 103
Query: 181 QAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240
Y+ VN + AD+++ ++ DD +W+HDYHL+ LRKR ++GFFLH PFP+ E
Sbjct: 104 DGYLRVNALLADKLLPLLQD-DDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPE 162
Query: 241 IYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTV 300
I+ LP + +L L + DL+GF T + FL C S + +T S + + +G+
Sbjct: 163 IFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHT---AWGKAF 219
Query: 301 SIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLA 360
++ P+GI ++ + P K+++L + + + V+ +D KG+ + LA
Sbjct: 220 RTEVYPIGIEPKEIAKQAAGP-LPPKLAQLKAEL--KNVQNIFSVERLDYSKGLPERFLA 276
Query: 361 MEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLI 420
E LL ++P+ GK+ QIA +RG + ++++ + + RIN +G+ G+ P+ +
Sbjct: 277 YEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYL 336
Query: 421 DEPLKFYERIAYYVVAECCLVTAVRDG-----------SEPSSPKKSMLVVSEFIGCSPS 469
++ + + ++ LVT +RDG +P++P +LV+S+F G +
Sbjct: 337 NQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANP--GVLVLSQFAGAANE 394
Query: 470 LSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLERT 529
L+ A+ VNP++ D V+ A+D AL M+ E+ RH + + +D+ +W F+ DL++
Sbjct: 395 LTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQI 454
Query: 530 CREHVRQRCWGIGFGLSFRVVALDPNFKKLSMEHIVSAY 568
+ +V F KL++EH +
Sbjct: 455 VPRSAESQ-------QRDKV----ATFPKLALEHHHHHH 482
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 3t7d_A* Length = 496 | Back alignment and structure |
|---|
Score = 555 bits (1431), Expect = 0.0
Identities = 90/495 (18%), Positives = 172/495 (34%), Gaps = 35/495 (7%)
Query: 61 RIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLK----EE 116
I + + + I G +W + + + ++
Sbjct: 4 EIFLASKRAAITYDTDPAT--GEPRAWLAPGGTGNVVAEQAGV-LNISWIASADSEDDRR 60
Query: 117 IHVNEQDEVSQILLDTFKC--VPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLG-G 173
D V+ L + P +F + +W +Y G
Sbjct: 61 ASALNPDGVTMELHSGREILVRLIRHDPAVFRNVQNFMTANLMWAANNYGWDRWTQPSFG 120
Query: 174 RFNRSLWQAYVSVNKIFADRIMEVINP-EDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFL 232
R W + + FAD I++ D VHDY L+ +P LR++ + F+
Sbjct: 121 SDAREGWADFGRFTRDFADAILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLFV 180
Query: 233 HSPFPSSEIYKTLP--IREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGY 290
H P+PS++ ++ LP IR IL +L + IGF + R+FL + +L R
Sbjct: 181 HIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLP-DARIDREA 239
Query: 291 IGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDI 350
+ +E+ G ++ +P+G L ++ E I+++ D G +++ D
Sbjct: 240 MTVEWRGHRTRLRTMPLGYSPLTLDG------RNPQLPEGIEEWAD-GHRLVVHSGRTDP 292
Query: 351 FKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFG 410
K + A +L K ++ NP R + + V N G
Sbjct: 293 IKNAERAVRAF--VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELG 350
Query: 411 KPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDG-----SE--PSSPKKSMLVVSEF 463
V ID IA + A+ + + DG E + + + +++SE
Sbjct: 351 S----DTVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSET 406
Query: 464 IGCSPSLSGAIR-VNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSF 522
G + L R VNP+++ ++A+ +AL +++ + + W ++
Sbjct: 407 CGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARRRDAARPWTLEAWVQAQ 466
Query: 523 LQDLERTCREHVRQR 537
L L
Sbjct: 467 LDGLAADHAARTATA 481
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 Length = 239 | Back alignment and structure |
|---|
Score = 223 bits (569), Expect = 2e-67
Identities = 44/255 (17%), Positives = 96/255 (37%), Gaps = 31/255 (12%)
Query: 575 AILLDYDGTLMPQAS--IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE 632
I LDYDGTL+P + ++ + +++ L + ++V+ +S + ++ +
Sbjct: 3 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDL--KERFDTYIVTGRSPEEISRFLPLD- 59
Query: 633 NLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVW 692
+ + HG ++ + G + + G I K A+++
Sbjct: 60 -INMICYHGACSKINGQIVYNNGSD-RFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLY 117
Query: 693 SYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQ 752
D +L +E + V G+ ++E++ GVNKG + +
Sbjct: 118 HLGLMGAD----MKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKGSAIRSVRGE-- 171
Query: 753 EREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDTV 812
+ GDD +DE FE + VG + AK+++ D +
Sbjct: 172 ------RPAIIAGDDATDEAAFEAN------------DDALTIKVGEGETHAKFHVADYI 213
Query: 813 EIVRLMQGLACVADQ 827
E+ ++++ + + Q
Sbjct: 214 EMRKILKFIEMLGVQ 228
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 Length = 275 | Back alignment and structure |
|---|
Score = 59.3 bits (143), Expect = 1e-09
Identities = 39/230 (16%), Positives = 71/230 (30%), Gaps = 27/230 (11%)
Query: 576 ILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC--EN 633
+ D DGTL+ S D P + + L R+ N V L S+K+ + +
Sbjct: 12 VFSDLDGTLLDSHSYDWQPAAPWLTRL----REANVPVILCSSKTSAEMLYLQKTLGLQG 67
Query: 634 LGIAAEHGYFFRLRRDEEWETCIPVADCG--WKQIAEPVMKLYTETTDGSTIEDKETALV 691
L + AE+G +L + P G +I+ + L + T D
Sbjct: 68 LPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLVLNTLREKEHFKFTTFDDVDDAT 127
Query: 692 WSYEDADPDFGSCQA--------------KELLDHLESVLANEPVTVKSGQNLVEVKPQG 737
+ + E + + L + G V
Sbjct: 128 IAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWHVLDAS 187
Query: 738 VNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIA 787
K A +++T Q+ L +GD +D + E + ++
Sbjct: 188 AGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLE-----VMDYAVI 232
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A Length = 227 | Back alignment and structure |
|---|
Score = 53.7 bits (130), Expect = 4e-08
Identities = 37/221 (16%), Positives = 69/221 (31%), Gaps = 40/221 (18%)
Query: 574 RAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCEN 633
R +D DG L D+ ++K I+ + S K V L+S +
Sbjct: 6 RLAAIDVDGNLT---DRDRLISTKAIESIRSA-EKKGLTVSLLSGNVIPVVYALK---IF 58
Query: 634 LG----IAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETA 689
LG + E+G D + + ++ ++ T +I
Sbjct: 59 LGINGPVFGENGGIMF-DNDGSIKKFFS------NEGTNKFLEEMSKRTSMRSILTNRWR 111
Query: 690 LVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLS 749
+ D DP E +D++ + + + +G +K +L
Sbjct: 112 EASTGFDIDP--------EDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLK- 162
Query: 750 TMQEREML---PDFVLCVGDDRSDEDMFEVIISSMAGPSIA 787
EM D +L +GD +D MF++
Sbjct: 163 -----EMYSLEYDEILVIGDSNNDMPMFQL-----PVRKAC 193
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.9 bits (131), Expect = 1e-07
Identities = 82/627 (13%), Positives = 180/627 (28%), Gaps = 170/627 (27%)
Query: 194 IMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPI----RE 249
I+ V ED FV ++ + + ++ ++ + S S + +E
Sbjct: 21 ILSVF--EDAFV--DNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQE 76
Query: 250 EILRALLNSDLIGFHTFDYARHFLSCCSR-MLGLTYESKRGYIGLEYYGRTVSIKILPVG 308
E+++ + L + F + M+ Y +R + Y V
Sbjct: 77 EMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRL----YNDNQVFAKYNVS 132
Query: 309 I--HMGQLQSVLSLPGTEAKVSELIKQFHDQ---GKVMLLG--VDDMDI---FKG----I 354
+L+ L E + ++ + GK + + +
Sbjct: 133 RLQPYLKLRQALL----ELRPAKNV-LIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWL 187
Query: 355 SLK-------LLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQ 407
+LK +L M Q L L QI R ++ +S + +
Sbjct: 188 NLKNCNSPETVLEMLQKL-----------LYQIDPNWTSRSDHSSNIKLRIHSIQAELRR 236
Query: 408 TFGKPGYDPVVLI-D--------EPLKF---------YERIAYYVVAECCLVTAVRDGSE 449
Y+ +L+ ++++ ++ A ++ S
Sbjct: 237 LLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSM 296
Query: 450 PSSPKKSMLVVSEFIGCSPS-L-SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHY 507
+P + ++ +++ C P L + NP + +++++ L D K + +K
Sbjct: 297 TLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLT 356
Query: 508 RYVSTHDVGYWARSFLQDLE----RTC-------REHVR------QRCWGIGFGLSFRVV 550
+ S L LE R W
Sbjct: 357 TIIE---------SSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWF---------- 397
Query: 551 ALDPNFKKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTI---DILNSLCR 607
+ K + +V+ L + ++K P TI I L
Sbjct: 398 ----DVIKSDVMVVVN----------------KLHKYSLVEKQPKESTISIPSIYLELKV 437
Query: 608 DKNNMVFLVSAKSRKTLAEWFS-----PCENLGIAAEHGYFF--------RLRRDEEWET 654
N L +++ + ++ ++L YF+ + E
Sbjct: 438 KLENEYAL-----HRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTL 492
Query: 655 CIPV-ADCGW--KQIAEPVMKLYTETTDGSTIEDKETALVWSYE----DADPDFGSCQAK 707
V D + ++I + +T++ + Y+ D DP + +
Sbjct: 493 FRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKF-----YKPYICDNDPKY-----E 542
Query: 708 ELLDHLESVLANEPVTVKSGQNLVEVK 734
L++ + L K +NL+ K
Sbjct: 543 RLVNAILDFL------PKIEENLICSK 563
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 50.2 bits (119), Expect = 3e-06
Identities = 72/469 (15%), Positives = 132/469 (28%), Gaps = 134/469 (28%)
Query: 19 SFGRMRRRIPRIMTVAGIISDLDDDPADSVCSDPSSSSVQRDRIIIVANQLPIRAQRKSD 78
+ + + ++ +D + S SS + RI + +L
Sbjct: 188 NLKNCNSPETVLEMLQKLLYQIDPN----WTSRSDHSSNIKLRIHSIQAEL--------- 234
Query: 79 NSKGWIFSWD-ENSLLLQLKDGLGDD--DIEVIY---VGC-------------------- 112
+ + S EN LL+ L + + + + C
Sbjct: 235 --RRLLKSKPYENCLLV-----L-LNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATT 286
Query: 113 ----LKEEIHVNEQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLS 168
L DEV +LL C P LP ++ P ++ S
Sbjct: 287 THISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREV--------LTTN--PRRLSIIAES 336
Query: 169 PDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVL-PTFLRKRFNRVK 227
+ W + VN D++ +I + L VL P RK F+R
Sbjct: 337 --IRDGLAT--WDNWKHVNC---DKLTTII----------ESSLNVLEPAEYRKMFDR-- 377
Query: 228 LGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESK 287
+ FP S I +L +L+ D+I L + + K
Sbjct: 378 --LSV---FPPS-----AHIPTILL-SLIWFDVIKSDVMVVVNK---LHKYSL-VEKQPK 422
Query: 288 RGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKV----MLL 343
I I L+ + L A ++ ++ ++
Sbjct: 423 ESTI----------------SIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIP 466
Query: 344 GVDDMDIFKGIS--LKLLAMEQLLIQHPEW-------QGKVVLVQIANPARGRGKDVKEV 394
D + I LK + + + + K+ A A G + +
Sbjct: 467 PYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQ- 525
Query: 395 QAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVA--ECCLV 441
Q + Y I P Y+ L++ L F +I ++ L+
Sbjct: 526 QLKFYK--PYI--CDNDPKYE--RLVNAILDFLPKIEENLICSKYTDLL 568
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 Length = 231 | Back alignment and structure |
|---|
Score = 52.5 bits (127), Expect = 1e-07
Identities = 44/222 (19%), Positives = 79/222 (35%), Gaps = 40/222 (18%)
Query: 574 RAILLDYDGTLM-PQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE 632
+AI +D DGT+ P I + K ++ + + LV+ + +
Sbjct: 4 KAISIDIDGTITYPNRMIHE----KALEAIRRA-ESLGIPIMLVTGNTVQFAEAAS---I 55
Query: 633 NLG----IAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKET 688
+G + AE G ++ + + W +I K + T+ D+
Sbjct: 56 LIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIR----KRFPNARTSYTMPDRRA 111
Query: 689 ALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLL 748
LV E + + +E+++ L N + + VK +NKG ++
Sbjct: 112 GLVIMRETINVE----TVREIINEL-----NLNLVAVDSGFAIHVKKPWINKGSGIEKAS 162
Query: 749 STMQEREML---PDFVLCVGDDRSDEDMFEVIISSMAGPSIA 787
E L P V VGD +D D F+V G +A
Sbjct: 163 ------EFLGIKPKEVAHVGDGENDLDAFKV-----VGYKVA 193
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* Length = 262 | Back alignment and structure |
|---|
Score = 51.1 bits (121), Expect = 5e-07
Identities = 40/242 (16%), Positives = 75/242 (30%), Gaps = 38/242 (15%)
Query: 561 MEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKS 620
M A +R L D DGTL P + + + L L + +V
Sbjct: 1 MAVTAQAARRKERVLCLFDVDGTLTPA---RQKIDPEVAAFLQKLR--SRVQIGVVGGSD 55
Query: 621 RKTLAEWFSPCENL-----GIAAEHGYFFRLRRDEEWETCIP------VADCGWKQIAEP 669
+AE + + + AE+G + I +
Sbjct: 56 YCKIAEQLGDGDEVIEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSY 115
Query: 670 VMKLYTETTDGSTIEDKETALVWSY-----------EDADPDFGSCQAKELLDHLESVLA 718
+ L G+ IE + L S E ++ D ++ ++ L++ A
Sbjct: 116 MALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFA 175
Query: 719 NEPVTVKS-GQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRS----DEDM 773
+ + G +V P+G +K L + D + G++ S D ++
Sbjct: 176 GKGLRFSRGGMISFDVFPEGWDKRYCLDSLD------QDSFDTIHFFGNETSPGGNDFEI 229
Query: 774 FE 775
F
Sbjct: 230 FA 231
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* Length = 244 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 4e-05
Identities = 34/232 (14%), Positives = 73/232 (31%), Gaps = 51/232 (21%)
Query: 574 RAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNN--MVFLVSAKSRKTLAEWFSPC 631
++ D D T + + + ++ L D+ + + +S + E
Sbjct: 4 LLLISDLDNTWVG--------DQQALEHLQEYLGDRRGNFYLAYATGRSYHSARELQ--- 52
Query: 632 ENLGIAAEHGY--------FFRLRRDEEWETCIPVADCGW-KQIAEPVMKLYTETTDGST 682
+ +G+ + + D+ W + W + I + + + S
Sbjct: 53 KQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSE---HWQRDILQAIADGFEALKPQSP 109
Query: 683 IEDKETALVWSYEDADPDFGSCQAKELLDHLESVLAN--EPVTV-KSGQNLVEVKPQGVN 739
+E + + + ++D L +L PV V S V++ PQ N
Sbjct: 110 LEQNPWKISYHLDPQA-------CPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSN 162
Query: 740 KG----LVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIA 787
KG + + L + L GD +D +FE + +
Sbjct: 163 KGNATQYLQQHLAMEPSQ-------TLVCGDSGNDIGLFE-----TSARGVI 202
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} PDB: 2i54_A* 2i55_A* Length = 246 | Back alignment and structure |
|---|
Score = 44.5 bits (104), Expect = 7e-05
Identities = 29/200 (14%), Positives = 56/200 (28%), Gaps = 27/200 (13%)
Query: 576 ILLDYDGTL-MPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSP---C 631
+L D DGTL P+ ++ R V V E
Sbjct: 7 LLFDVDGTLTPPRLCQTDE----MRALIKRA-RGAGFCVGTVGGSDFAKQVEQLGRDVLT 61
Query: 632 ENLGIAAEHGYFFRLRRDEEWETCI--PVADCGWKQIAEPVMKLYTE----TTDGSTIED 685
+ + AE+G E + + + + + ++L + G+ +E
Sbjct: 62 QFDYVFAENGLLAYRNGLEIHRQSLLNALGNDRIVKFVKKTLRLIADLDIPVQRGTFVEY 121
Query: 686 KETALVWSYEDADPDFGSCQAKELLDHL------------ESVLANEPVTVKSGQNLVEV 733
+ + S + E+ D+ S GQ +V
Sbjct: 122 RNGMINVSPIGRNCSQAERDEFEVYDNEHRVRASLIAELENSFPDFGLKYSIGGQISFDV 181
Query: 734 KPQGVNKGLVAKRLLSTMQE 753
P G +K + + +E
Sbjct: 182 FPVGWDKTYCLQFVEDDFEE 201
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} Length = 289 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 1e-04
Identities = 35/239 (14%), Positives = 77/239 (32%), Gaps = 39/239 (16%)
Query: 576 ILLDYDGTLMPQASIDKSPNSKTIDI---LNSLCRDKNNMVFLVS----AKSRKTLAEWF 628
+ D+D T P +ID+ ++ L +D ++ V+ +
Sbjct: 25 VFCDFDETYFP-HTIDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESILDKMGRGK 83
Query: 629 SPCENLGIAAEHG---YFFR----LRRDEEWETCIPVADCGW-KQIAEPVMKLYTET--- 677
IA++ G +F ++D +W + I G+ K+ E ++K E
Sbjct: 84 FRYFPHFIASDLGTEITYFSEHNFGQQDNKWNSRINE---GFSKEKVEKLVKQLHENHNI 140
Query: 678 TDGSTIEDKETALVWSY----EDADPDFGSCQA-----KELLDHLESVLANEPVTVKSGQ 728
+ ++ ++ +D D + A +E + N
Sbjct: 141 LLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDS 200
Query: 729 NLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIA 787
V+ P G K + + +++ + + + GD +D M + G
Sbjct: 201 YDVDFIPIGTGKNEIVTFM---LEKYNLNTERAIAFGDSGNDVRMLQ-----TVGNGYL 251
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A Length = 249 | Back alignment and structure |
|---|
Score = 43.3 bits (101), Expect = 2e-04
Identities = 42/260 (16%), Positives = 72/260 (27%), Gaps = 41/260 (15%)
Query: 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE 632
R I LD D TL+ I+ L +D + S+K+R + E
Sbjct: 2 IRLIFLDIDKTLI-----PGYEPDPAKPIIEEL-KDMGFEIIFNSSKTRAEQEYYRKELE 55
Query: 633 -NLGIAAEHG------------YFFRLRRDEEWETCIPVADCGWKQIAEPV-----MKLY 674
+E+G + + ++ + + +K Y
Sbjct: 56 VETPFISENGSAIFIPKGYFPFDVKGKEVGNYIVIELGIRVEKIREELKKLENIYGLKYY 115
Query: 675 TETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVK 734
+T + + ++ + D E VL V G V
Sbjct: 116 GNSTKEEIEKFTGMPPELVPLAMEREYSETIFEWSRDGWEEVLVEGGFKVTMGSRFYTV- 174
Query: 735 PQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFA 794
+KG AK LL + VGD +D MFE +
Sbjct: 175 HGNSDKGKAAKILLDFYKRLG--QIESYAVGDSYNDFPMFE-----VVD---------KV 218
Query: 795 CTVGRKPSKAKYYLDDTVEI 814
VG K + +++
Sbjct: 219 FIVGSLKHKKAQNVSSIIDV 238
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 831 | |||
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 100.0 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 100.0 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 99.96 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.94 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.94 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.93 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.93 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.92 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.92 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.92 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.91 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.91 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.91 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.91 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.91 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 99.9 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 99.9 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.9 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 99.9 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 99.89 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 99.89 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.89 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.88 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 99.88 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.88 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.88 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 99.86 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 99.85 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 99.82 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 99.82 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 99.81 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 99.81 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 99.81 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 99.8 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 99.8 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 99.79 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 99.79 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 99.77 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.77 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 99.75 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.74 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.7 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 99.67 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 99.66 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.56 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.54 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.5 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.43 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 99.42 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.38 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.35 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.33 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.32 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.32 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.28 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.28 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.28 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.24 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 99.24 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.21 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.19 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.16 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.12 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.11 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.11 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.1 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.1 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.07 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.04 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.04 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.04 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.01 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.01 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 98.98 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.95 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.94 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.9 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.87 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.85 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.78 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.78 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.77 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.74 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.73 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.7 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 98.68 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 98.66 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.63 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 98.6 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 98.59 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.59 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.58 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.57 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.57 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 98.56 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 98.56 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.53 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 98.53 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 98.53 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 98.52 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.5 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.48 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 98.48 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.45 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 98.43 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 98.43 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 98.43 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.42 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 98.42 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.4 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 98.38 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 98.33 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 98.33 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 98.29 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 98.29 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 98.28 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.27 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 98.26 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.26 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 98.25 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 98.16 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 98.16 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.09 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 98.07 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 98.05 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.04 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 97.96 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 97.95 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 97.93 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 97.93 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.87 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 97.87 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 97.75 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 97.71 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.67 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.65 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 97.63 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 97.61 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 97.53 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.47 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 97.44 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 97.38 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 97.35 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 97.23 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.18 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 97.17 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 97.09 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.01 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.01 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 96.99 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 96.95 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 96.86 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 96.82 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 96.82 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 96.81 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 96.81 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 96.75 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 95.75 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 96.71 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 96.63 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 96.38 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 96.32 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 96.3 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 96.27 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 96.22 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 96.16 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 96.16 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 96.11 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 95.95 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 95.77 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 95.68 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 95.32 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 95.12 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 94.63 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 94.47 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 94.34 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 94.07 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 93.8 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 93.71 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 93.6 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 93.38 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 93.3 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 93.3 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 93.19 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 92.8 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 91.98 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 91.8 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 91.58 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 91.51 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 90.69 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 89.87 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 89.59 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 89.55 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 88.97 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 88.96 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 88.8 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 88.67 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 88.29 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 88.07 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 86.93 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 86.89 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 86.62 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 86.61 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 86.44 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 86.24 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 86.12 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 85.96 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 85.31 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 85.17 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 84.96 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 84.31 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 83.96 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 83.94 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 83.62 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 83.49 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 82.99 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 82.94 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 80.95 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 80.01 |
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-103 Score=894.20 Aligned_cols=451 Identities=18% Similarity=0.280 Sum_probs=396.2
Q ss_pred CCcEEEEEcCCccceeecCCCCCCe---EEeeCCCchHHHhhhccCCCCCCeEEEeccCCcCCcchhh----hHhH--hh
Q 044635 59 RDRIIIVANQLPIRAQRKSDNSKGW---IFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVNEQD----EVSQ--IL 129 (831)
Q Consensus 59 ~~r~iivsnrlP~~~~~~~~~~~~~---~~~~~~~~l~~~l~~~l~~~~~~~~wvG~~~~~~~~~~~~----~~~~--~~ 129 (831)
..++||||||||+.+++++++ |+| .++.++|||+++|.+.+ +++||||.+.+.+....+ .+.. ..
T Consensus 2 ~~~livvsnR~P~~~~~~~~~-g~~~~~~~~~s~GGLv~al~~~~-----~~~Wvgw~~~~~~~~~~~~~~~~~~~~~~~ 75 (496)
T 3t5t_A 2 GSEIFLASKRAAITYDTDPAT-GEPRAWLAPGGTGNVVAEQAGVL-----NISWIASADSEDDRRASALNPDGVTMELHS 75 (496)
T ss_dssp --CEEEEESCCCEEEEECTTT-CSEEEEECSSHHHHHHHHHHHHH-----TCCEEEECCSHHHHHHHHHCTTCEEEECTT
T ss_pred CCCEEEEECCCCeeEEEecCC-CceeeeeeccCCCchHHHHhhhc-----CCEEEecCCCccchhhhhcccccccccccc
Confidence 468999999999999987323 676 67778999999998754 578999998653221110 0111 12
Q ss_pred ccCeeEEEEeCChHhhhhHhhhhhccccccccccCCC--CCCCCCCccChhhHHHHHHHHHHHHHHHHHHcCC-CCCEEE
Q 044635 130 LDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLP--LSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINP-EDDFVW 206 (831)
Q Consensus 130 ~~~~~~~pv~l~~~~~~~~y~gf~~~~lWp~~H~~~~--~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~-~~d~vw 206 (831)
..+|+|+||+|+++++++||+||||++|||+|||+++ ..|+. .+|++++|++|++||++||++|++.+++ ++|+||
T Consensus 76 ~~~~~~~~v~l~~~~~~~~Y~gf~n~~LWPl~H~~~~~~~~p~~-~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~~~D~Vw 154 (496)
T 3t5t_A 76 GREILVRLIRHDPAVFRNVQNFMTANLMWAANNYGWDRWTQPSF-GSDAREGWADFGRFTRDFADAILKSSAQSADPVYL 154 (496)
T ss_dssp SCEEEEEEECCCHHHHHHHHHHHSTTTHHHHHTTCCCSSSCCCB-CHHHHHHHHHHHHHHHHHHHHHHHHTTTCSSCEEE
T ss_pred CCCeEEEEEeCCHHHHHHHHHHhHhhhcchhhccccccCCCCcc-chhhHHHHHHHHHHHHHHHHHHHHHhccCCCCEEE
Confidence 5689999999999999999999999999999999853 33433 3566789999999999999999999952 469999
Q ss_pred EeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCC--ChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHh-CCe
Q 044635 207 VHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLP--IREEILRALLNSDLIGFHTFDYARHFLSCCSRML-GLT 283 (831)
Q Consensus 207 vhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp--~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l-~~~ 283 (831)
|||||||+||+|||+++|+++||||||||||++|+|++|| ||++|++|||+||+|||||++|++||++||+|+| |.+
T Consensus 155 VhDYhL~llp~~lR~~~~~~~igfFlHiPfPs~e~f~~Lp~~~r~ell~gll~~DligF~t~~y~~~Fl~~~~r~l~g~~ 234 (496)
T 3t5t_A 155 VHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLPDAR 234 (496)
T ss_dssp EESGGGTTHHHHHHHHCTTSCEEEECCSCCCCHHHHTTSCHHHHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHCTTCE
T ss_pred EeCccHhHHHHHHHhhCCCCeEEEEEcCCCCCHHHHhhCcHhHHHHHHHHHHhCCEEEEecHHHHHHHHHHHHHHhcCCc
Confidence 9999999999999999999999999999999999999999 7999999999999999999999999999999999 988
Q ss_pred ecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHHHH
Q 044635 284 YESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQ 363 (831)
Q Consensus 284 ~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~~~ 363 (831)
.....+ .++++|+.++|.++|+|||++.|.+... ++ .+++++++ .++++||+|||||+.|||..+|+|| +
T Consensus 235 ~~~~~~--~v~~~gr~v~v~viP~GID~~~f~~~~~--~~---~~~lr~~~--~~~~lIl~VgRLd~~KGi~~lL~Af-~ 304 (496)
T 3t5t_A 235 IDREAM--TVEWRGHRTRLRTMPLGYSPLTLDGRNP--QL---PEGIEEWA--DGHRLVVHSGRTDPIKNAERAVRAF-V 304 (496)
T ss_dssp EETTTT--EEEETTEEEEEEECCCCBCGGGC----C--CC---CTTHHHHH--TTSEEEEEEEESSGGGCHHHHHHHH-H
T ss_pred ccccCC--eEEECCEEEEEEEeccEeCHHHhchhhH--HH---HHHHHHHh--CCceEEEEcccCccccCHHHHHHHH-H
Confidence 765544 5899999999999999999999986543 11 15788889 6899999999999999999999999 9
Q ss_pred HHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECC
Q 044635 364 LLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTA 443 (831)
Q Consensus 364 lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS 443 (831)
||+++|+++ +++|||||.|+|+++++|+++++++++++++||.+||+. ||+|+ +.++.+++.++|++|||||+||
T Consensus 305 ll~~~P~~~-~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~---~V~f~-g~v~~~el~aly~~ADv~vv~S 379 (496)
T 3t5t_A 305 LAARGGGLE-KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD---TVRID-NDNDVNHTIACFRRADLLIFNS 379 (496)
T ss_dssp HHHHTSSCT-TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT---SEEEE-ECCCHHHHHHHHHHCSEEEECC
T ss_pred HHHhCcccc-eEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc---CEEEe-CCCCHHHHHHHHHhccEEEECc
Confidence 999999999 999999999999999999999999999999999999875 78876 4789999999999999999999
Q ss_pred CccCCC--------CCCCCCceEEEeccccccccc-CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCC
Q 044635 444 VRDGSE--------PSSPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHD 514 (831)
Q Consensus 444 ~~eGma--------~~~~~~g~lVlSe~~G~~~~l-~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 514 (831)
++|||+ |. +.+|++|+|+++|++++| .+|++|||||++++|+||.++|+||++||++|+++++++|.+||
T Consensus 380 lrEGfgLv~~EamA~~-~~~g~lVlSe~aGa~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~~d 458 (496)
T 3t5t_A 380 TVDGQNLSTFEAPLVN-ERDADVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARRRDAARPWT 458 (496)
T ss_dssp SSBSCCSHHHHHHHHC-SSCCEEEEETTBTTHHHHGGGSEEECTTBHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCB
T ss_pred ccccCChhHHHHHHhC-CCCCCEEEeCCCCCHHHhCCCEEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCC
Confidence 999993 32 356899999999999999 57999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 044635 515 VGYWARSFLQDLERTCRE 532 (831)
Q Consensus 515 ~~~W~~~~l~~l~~~~~~ 532 (831)
+.+|+++|+++|..+...
T Consensus 459 ~~~W~~~fl~~L~~~~~~ 476 (496)
T 3t5t_A 459 LEAWVQAQLDGLAADHAA 476 (496)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcccc
Confidence 999999999999887554
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-88 Score=776.93 Aligned_cols=444 Identities=28% Similarity=0.547 Sum_probs=403.5
Q ss_pred CcEEEEEcCCccceeecCCCCCCeEEeeCCCchHHHhhhccCCCCCCeEEEeccCCcCCcchhhhHhHhhccCeeEEEEe
Q 044635 60 DRIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVNEQDEVSQILLDTFKCVPTF 139 (831)
Q Consensus 60 ~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~wvG~~~~~~~~~~~~~~~~~~~~~~~~~pv~ 139 (831)
+|+||||||||+... + +.++|||+++|.+.+.+ .+++||||+|.. ++ +++.+.+.+.++|+|+|||
T Consensus 2 ~~livvsnr~p~~~~------~----~~~~ggl~~~l~~~~~~--~~~~wvgw~g~~-~~-~~~~~~~~~~~~~~~~~v~ 67 (482)
T 1uqt_A 2 SRLVVVSNRIAPPDE------H----AASAGGLAVGILGALKA--AGGLWFGWSGET-GN-EDQPLKKVKKGNITWASFN 67 (482)
T ss_dssp CCEEEEEEECCCCC--------------CCCHHHHHHHHHHHH--HCEEEEEEEEEE-SC-CSSCCEEEEETTEEEEEEE
T ss_pred CCEEEEECCCCCCCC------C----CcCCCcHHHHHHHHHhh--CCCEEEeCCCCC-Cc-ccchhhhhccCCceEEEEE
Confidence 589999999999721 1 24678999999887754 699999999865 32 3333444456789999999
Q ss_pred CChHhhhhHhhhhhccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHH
Q 044635 140 LPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFL 219 (831)
Q Consensus 140 l~~~~~~~~y~gf~~~~lWp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~l 219 (831)
|+++++++||+||||++|||+|||+++. ..|+++.|++|+++|++||+++.+.+++ +|+|||||||++++|.++
T Consensus 68 l~~~~~~~~y~gf~~~~lWp~~H~~~~~-----~~~~~~~w~~y~~vN~~fa~~l~~~~~~-~DiV~vHdyhl~~l~~~l 141 (482)
T 1uqt_A 68 LSEQDLDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWDGYLRVNALLADKLLPLLQD-DDIIWIHDYHLLPFAHEL 141 (482)
T ss_dssp ECHHHHHHHTTTHHHHTHHHHHTTCGGG-----CCCCHHHHHHHHHHHHHHHHHHGGGCCT-TCEEEEESGGGTTHHHHH
T ss_pred CCHHHHHHHHHHhhhhhccccccCcCCc-----cccCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEECchHHHHHHHH
Confidence 9999999999999999999999999864 4899999999999999999999999986 599999999999999999
Q ss_pred HhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEE
Q 044635 220 RKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRT 299 (831)
Q Consensus 220 r~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~ 299 (831)
|++.++++|+||+|+|||++++|+++|++++|+++|+++|+||||+++|+++|+++|+++++.+.... + .+.++|+.
T Consensus 142 r~~~~~~~i~~~~H~pfp~~~~~~~lp~~~~il~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~~-~--~~~~~g~~ 218 (482)
T 1uqt_A 142 RKRGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSA-K--SHTAWGKA 218 (482)
T ss_dssp HHTTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETT-T--EEEETTEE
T ss_pred HHhCCCCcEEEEEcCCCCCHHHHhhCccHHHHHHhhhccCeEEEECHHHHHHHHHHHHHHhCCccccC-C--eEEECCeE
Confidence 99999999999999999999999999999999999999999999999999999999999999876542 2 37889999
Q ss_pred EEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 044635 300 VSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQ 379 (831)
Q Consensus 300 ~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvq 379 (831)
++|.++|+|||++.|.+....+.+.+ .+++|+++ .++++|++|||+++.||+..+|+||++|++++|+++++++|||
T Consensus 219 ~~v~vip~GID~~~f~~~~~~~~~~~-~~~lr~~~--~~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~ 295 (482)
T 1uqt_A 219 FRTEVYPIGIEPKEIAKQAAGPLPPK-LAQLKAEL--KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQ 295 (482)
T ss_dssp EEEEECCCCCCHHHHHHHHHSCCCHH-HHHHHHHT--TTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEE
T ss_pred EEEEEEeccCCHHHHHHHhcCcchHH-HHHHHHHh--CCCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEE
Confidence 99999999999999987655555555 67899999 6899999999999999999999999999999999999999999
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCC--------CCC
Q 044635 380 IANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGS--------EPS 451 (831)
Q Consensus 380 ig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGm--------a~~ 451 (831)
||.|+|+++++|+++++++++++++||.+||..+|.||+++.+.++++++.++|++|||||+||++||| +|.
T Consensus 296 vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g 375 (482)
T 1uqt_A 296 IAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQ 375 (482)
T ss_dssp ECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHS
T ss_pred EECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 343
Q ss_pred -CCCCceEEEecccccccccCCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHH
Q 044635 452 -SPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLERT 529 (831)
Q Consensus 452 -~~~~g~lVlSe~~G~~~~l~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 529 (831)
...+||+|+|+++|+++++.+|++|||+|++++|+||.++|+|++++|+.+++++++++.++++..|+++|+++++++
T Consensus 376 ~~~~~gpvV~S~~~G~~~~l~~g~lv~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 376 DPANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQI 454 (482)
T ss_dssp CTTSCCEEEEETTBGGGGTCTTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred CCCCCCCEEEECCCCCHHHhCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 234579999999999999999999999999999999999999999999999999999999999999999999999876
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=99.96 E-value=6.7e-28 Score=252.53 Aligned_cols=219 Identities=20% Similarity=0.297 Sum_probs=165.9
Q ss_pred ceeEEecCCCccCCCCC--CCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCc
Q 044635 573 TRAILLDYDGTLMPQAS--IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDE 650 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~--~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~ 650 (831)
+|+|++|+||||++... .++.++++++++|++|++. | .|+|+|||+...+.+++..+ .++|++||++++.. +
T Consensus 1 ikli~~DlDGTLl~~~~~~~~~~i~~~~~~al~~l~~~-g-~v~iaTGR~~~~~~~~~~~l--~~~I~~nGa~i~~~-~- 74 (239)
T 1u02_A 1 MSLIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKER-F-DTYIVTGRSPEEISRFLPLD--INMICYHGACSKIN-G- 74 (239)
T ss_dssp -CEEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHHH-S-EEEEECSSCHHHHHHHSCSS--CEEEEGGGTEEEET-T-
T ss_pred CeEEEEecCCCCcCCCCCcccCCCCHHHHHHHHHHhcC-C-CEEEEeCCCHHHHHHHhccc--hheEEECCEEEeeC-C-
Confidence 47999999999998421 2457899999999999885 8 99999999999999999877 78999999999883 2
Q ss_pred eEEEcCC-cCCccH-HHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcC
Q 044635 651 EWETCIP-VADCGW-KQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQ 728 (831)
Q Consensus 651 ~w~~~~~-~~~~~w-~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~ 728 (831)
++..... .....+ .+.+..+++.. ++.++.+++.++..+.++|+..++ +.....+++.+.+.+. . .+.+.++.
T Consensus 75 ~~~~~~~~~~~~~l~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~-~--~~~~~~~~ 149 (239)
T 1u02_A 75 QIVYNNGSDRFLGVFDRIYEDTRSWV-SDFPGLRIYRKNLAVLYHLGLMGA-DMKPKLRSRIEEIARI-F--GVETYYGK 149 (239)
T ss_dssp EEEECTTGGGGHHHHHHHHHHHTTHH-HHSTTCEEEEETTEEEEECTTSCS-TTHHHHHHHHHHHHHH-H--TCEEEECS
T ss_pred eeeecccccccchhhHHHHHHHHHHH-hhCCCcEEEecCCEEEEEcCCCCh-hHHHHHHHHHHHHhcc-C--CcEEEeCC
Confidence 3321100 001112 22344444443 334677788777778888876543 2222234444445443 2 24567899
Q ss_pred eEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHc--chhcCCCCCCCCCceEEEEeCCCCcccce
Q 044635 729 NLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVI--ISSMAGPSIAPRAEVFACTVGRKPSKAKY 806 (831)
Q Consensus 729 ~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a--~~~~~~~~~~~~~~~~~v~vG~~~s~A~y 806 (831)
.++||+|+++|||.|+++|++++ | ++||||+.||++||+.+ + ++|+|||+++.|+|
T Consensus 150 ~~lei~~~~~~Kg~al~~l~~~~---g-----via~GD~~ND~~Ml~~a~~g--------------~~vam~Na~~~A~~ 207 (239)
T 1u02_A 150 MIIELRVPGVNKGSAIRSVRGER---P-----AIIAGDDATDEAAFEANDDA--------------LTIKVGEGETHAKF 207 (239)
T ss_dssp SEEEEECTTCCHHHHHHHHHTTS---C-----EEEEESSHHHHHHHHTTTTS--------------EEEEESSSCCCCSE
T ss_pred cEEEEEcCCCCHHHHHHHHHhhC---C-----eEEEeCCCccHHHHHHhhCC--------------cEEEECCCCCcceE
Confidence 99999999999999999999987 5 99999999999999999 6 68999999999999
Q ss_pred EeCC---hhHHHHHHHHHHhh
Q 044635 807 YLDD---TVEIVRLMQGLACV 824 (831)
Q Consensus 807 ~l~d---~~eV~~~L~~L~~~ 824 (831)
++.+ .++|+++|+++...
T Consensus 208 v~~~~~~~~gV~~~l~~~~~~ 228 (239)
T 1u02_A 208 HVADYIEMRKILKFIEMLGVQ 228 (239)
T ss_dssp EESSHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHHHHHh
Confidence 9988 89999999998754
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.7e-26 Score=246.18 Aligned_cols=229 Identities=17% Similarity=0.231 Sum_probs=161.8
Q ss_pred HHHHhcCceeEEecCCCccCCCCCCCC-CCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC-CCceEEecCCEE
Q 044635 566 SAYKRTTTRAILLDYDGTLMPQASIDK-SPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC-ENLGIAAEHGYF 643 (831)
Q Consensus 566 ~~y~~s~~rli~~D~DGTLl~~~~~~~-~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~-~~~~liaenGa~ 643 (831)
.+|...++|+|++|+||||++ ..+ .++++++++|++|.+ .|+.|+++|||+...+..++..+ ...++|+.||+.
T Consensus 14 ~~~~~~~~kli~~DlDGTLl~---~~~~~i~~~~~~al~~l~~-~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~ 89 (283)
T 3dao_A 14 NLYFQGMIKLIATDIDGTLVK---DGSLLIDPEYMSVIDRLID-KGIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTV 89 (283)
T ss_dssp -----CCCCEEEECCBTTTBS---TTCSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTE
T ss_pred hhhhccCceEEEEeCcCCCCC---CCCCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCcEEEECCCcE
Confidence 578899999999999999998 566 899999999999986 59999999999999999998876 346899999999
Q ss_pred EEeCCCceEEEcCCcCCccHHHHHHHHHHHHhcc----------CCCeeEeeccceE--------EEee------ccC--
Q 044635 644 FRLRRDEEWETCIPVADCGWKQIAEPVMKLYTET----------TDGSTIEDKETAL--------VWSY------EDA-- 697 (831)
Q Consensus 644 i~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~----------~~gs~ie~k~~~l--------~~~~------~~~-- 697 (831)
++..+...+...+ + .+.+.++++.+.+. ..+.|.......+ ...+ ...
T Consensus 90 i~~~~~~i~~~~l---~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 163 (283)
T 3dao_A 90 VRTPKEILKTYPM---D---EDIWKGMCRMVRDELPACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVDDITRLDR 163 (283)
T ss_dssp EECSSCEEEECCC---C---HHHHHHHHHHHHHHCTTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECSCGGGCCC
T ss_pred EEECCEEEEEecC---C---HHHHHHHHHHHHHhcCCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcCCHHHcCc
Confidence 9985443443322 2 23344555444332 1122221110000 0000 000
Q ss_pred CCc-----c-chHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhH
Q 044635 698 DPD-----F-GSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDE 771 (831)
Q Consensus 698 d~~-----~-~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe 771 (831)
++- + ......++.+.+.+.+.+....+.++..++||+|+++|||.|++++++++ |++++++++|||+.||+
T Consensus 164 ~~~~ki~i~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~e~ia~GD~~NDi 240 (283)
T 3dao_A 164 NDIIKFTVFHPDKCEELCTPVFIPAWNKKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRF---DLLPDEVCCFGDNLNDI 240 (283)
T ss_dssp SCCCEEEEECSSCHHHHHTTTHHHHHTTTEEEEEETTTEEEEEETTCCHHHHHHHHHHHT---TCCGGGEEEEECSGGGH
T ss_pred cCceEEEEEcChHHHHHHHHHHHHHhcCCEEEEEecCceEEEeeCCCcHHHHHHHHHHHh---CCCHHHEEEECCCHHHH
Confidence 000 0 01223344455555555433456788999999999999999999999999 99999999999999999
Q ss_pred HHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEeC--ChhHHHHHHHHH
Q 044635 772 DMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLD--DTVEIVRLMQGL 821 (831)
Q Consensus 772 ~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~--d~~eV~~~L~~L 821 (831)
+||+.++ ++|+|||+ +..|+|++. +.++|+++|+++
T Consensus 241 ~ml~~ag--------------~~vam~na~~~~k~~A~~v~~s~~edGv~~~l~~~ 282 (283)
T 3dao_A 241 EMLQNAG--------------ISYAVSNARQEVIAAAKHTCAPYWENGVLSVLKSF 282 (283)
T ss_dssp HHHHHSS--------------EEEEETTSCHHHHHHSSEEECCGGGTHHHHHHHHT
T ss_pred HHHHhCC--------------CEEEcCCCCHHHHHhcCeECCCCCCChHHHHHHHh
Confidence 9999997 58999987 478999985 467799999876
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.2e-26 Score=244.18 Aligned_cols=231 Identities=12% Similarity=0.116 Sum_probs=157.6
Q ss_pred HHHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC-CCceEEecCCEEE
Q 044635 566 SAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC-ENLGIAAEHGYFF 644 (831)
Q Consensus 566 ~~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~-~~~~liaenGa~i 644 (831)
.+|+..++|+|+||+||||++ ..+.+++++.++|++|.+ +|+.|+++|||+...+..++..+ ...++|+.||+.+
T Consensus 14 ~~~~~~~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~-~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i 89 (285)
T 3pgv_A 14 NLYFQGMYQVVASDLDGTLLS---PDHFLTPYAKETLKLLTA-RGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARV 89 (285)
T ss_dssp -------CCEEEEECCCCCSC---TTSCCCHHHHHHHHHHHT-TTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEE
T ss_pred cccccCcceEEEEeCcCCCCC---CCCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEE
Confidence 689999999999999999999 778899999999999976 69999999999999998888665 3467899999999
Q ss_pred EeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCC---------CeeEeeccceEEEee-------ccCC------Cc--
Q 044635 645 RLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTD---------GSTIEDKETALVWSY-------EDAD------PD-- 700 (831)
Q Consensus 645 ~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~---------gs~ie~k~~~l~~~~-------~~~d------~~-- 700 (831)
+...+....... .+ .+.+.++++.+.+... +.+.......+...+ ...+ ..
T Consensus 90 ~~~~~~~l~~~~--l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 164 (285)
T 3pgv_A 90 HDSDGQQIFAHN--LD---RDIAADLFEIVRNDPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGIS 164 (285)
T ss_dssp ECTTSCEEEECC--CC---HHHHHHHTTTTTTCTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEE
T ss_pred ECCCCCEEEecC--CC---HHHHHHHHHHHhhcCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCce
Confidence 975443332221 11 3445555552221111 111110000000000 0000 00
Q ss_pred ------cchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHH
Q 044635 701 ------FGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMF 774 (831)
Q Consensus 701 ------~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf 774 (831)
.......++.+.+.+.+......+.++..++||+|+++|||.|++++++++ |++++++++|||+.||++||
T Consensus 165 ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~l---gi~~~~~ia~GD~~NDi~ml 241 (285)
T 3pgv_A 165 KVFFTCEDHEHLLPLEQAMNARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKML---GYTLSDCIAFGDGMNDAEML 241 (285)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHHGGGEEEEESSTTEEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEEECSGGGHHHH
T ss_pred EEEEeCCCHHHHHHHHHHHHHHhcCCEEEEEeCCceEEEecCCCChHHHHHHHHHHh---CCCHHHEEEECCcHhhHHHH
Confidence 011234456666665554332345667899999999999999999999999 99999999999999999999
Q ss_pred HHcchhcCCCCCCCCCceEEEEeCCC----Ccccce--Ee--CChhHHHHHHHHHH
Q 044635 775 EVIISSMAGPSIAPRAEVFACTVGRK----PSKAKY--YL--DDTVEIVRLMQGLA 822 (831)
Q Consensus 775 ~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y--~l--~d~~eV~~~L~~L~ 822 (831)
+.++ ++|+|||+ +..|+| ++ ++.++|+++|+++.
T Consensus 242 ~~ag--------------~~vAm~Na~~~vk~~A~~~~v~~sn~edGva~~i~~~~ 283 (285)
T 3pgv_A 242 SMAG--------------KGCIMANAHQRLKDLHPELEVIGSNADDAVPRYLRKLY 283 (285)
T ss_dssp HHSS--------------EEEECTTSCHHHHHHCTTSEECCCGGGTHHHHHHHHHH
T ss_pred HhcC--------------CEEEccCCCHHHHHhCCCCEecccCCcchHHHHHHHHh
Confidence 9998 58999997 356775 44 46899999999874
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.93 E-value=8.9e-25 Score=236.85 Aligned_cols=226 Identities=17% Similarity=0.302 Sum_probs=162.8
Q ss_pred cCceeEEecCCCccCCCCCCCCCCCHH-HHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCC
Q 044635 571 TTTRAILLDYDGTLMPQASIDKSPNSK-TIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRR 648 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~~~~~~s~~-~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~ 648 (831)
.++|+|+||+||||++ ..+.++++ +.++|++|.+ .|+.|+++|||+...+..++..+. ..++|+.||+.+...+
T Consensus 35 M~iKli~fDlDGTLld---~~~~i~~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~ 110 (304)
T 3l7y_A 35 MSVKVIATDMDGTFLN---SKGSYDHNRFQRILKQLQE-RDIRFVVASSNPYRQLREHFPDCHEQLTFVGENGANIISKN 110 (304)
T ss_dssp -CCSEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHH-TTCEEEEECSSCHHHHHTTCTTTGGGSEEEEGGGTEEEETT
T ss_pred eeeEEEEEeCCCCCCC---CCCccCHHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHhCCCCcEEeCCCcEEEECC
Confidence 4689999999999999 77888998 8999999987 599999999999999999988773 4789999999997654
Q ss_pred CceEEEcCCcCCccHHHHHHHHHHHHhccCC----------CeeEeeccc--------------eEEEeeccC-CCc---
Q 044635 649 DEEWETCIPVADCGWKQIAEPVMKLYTETTD----------GSTIEDKET--------------ALVWSYEDA-DPD--- 700 (831)
Q Consensus 649 ~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~----------gs~ie~k~~--------------~l~~~~~~~-d~~--- 700 (831)
...+...+ + .+.+.++++.+.+..+ +.|...... ...-.+.+. +..
T Consensus 111 ~~i~~~~l---~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~k 184 (304)
T 3l7y_A 111 QSLIEVFQ---Q---REDIASIIYFIEEKYPQAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVNSFSPLPDERFFK 184 (304)
T ss_dssp EEEEECCC---C---HHHHHHHHHHHHHHCTTSEEEEEESSCEEEETTSCHHHHHHHTTSCSSEEEESCCSSCC-CCEEE
T ss_pred EEEEEecC---C---HHHHHHHHHHHHHhcCCeEEEEEcCCCEeeeCCCCHHHHHHHHHHhccceecCCHHHcCcCCeEE
Confidence 33333222 2 2345555655544221 111111000 000000000 000
Q ss_pred ----cchHHHHHHHHHHHhHhcC-CCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHH
Q 044635 701 ----FGSCQAKELLDHLESVLAN-EPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFE 775 (831)
Q Consensus 701 ----~~~~~a~el~~~L~~~l~~-~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~ 775 (831)
......+++.+.+.+.+.+ ....+.++..++||+|+++|||.|++++++++ |++++++++|||+.||++||+
T Consensus 185 i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~l---gi~~~e~i~~GDs~NDi~m~~ 261 (304)
T 3l7y_A 185 LTLQVKEEESAQIMKAIADYKTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRW---NFTSDHLMAFGDGGNDIEMLK 261 (304)
T ss_dssp EEEECCGGGHHHHHHHHHTSTTTTTEEEEECSTTEEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEEECSGGGHHHHH
T ss_pred EEEEcCHHHHHHHHHHHHHhcCCCeEEEEEcCCceEEEEcCCCCHHHHHHHHHHHh---CcCHHHEEEECCCHHHHHHHH
Confidence 0112345667777665554 22345668889999999999999999999999 999999999999999999999
Q ss_pred HcchhcCCCCCCCCCceEEEEeCCC----CcccceEeCC--hhHHHHHHHHHHh
Q 044635 776 VIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLDD--TVEIVRLMQGLAC 823 (831)
Q Consensus 776 ~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~d--~~eV~~~L~~L~~ 823 (831)
.++ ++|+||++ +..|+|++.+ .++|+++|+++..
T Consensus 262 ~ag--------------~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~~~~ 301 (304)
T 3l7y_A 262 LAK--------------YSYAMANAPKNVKAAANYQAKSNDESGVLDVIDNYLA 301 (304)
T ss_dssp HCT--------------EEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHHHHH
T ss_pred hcC--------------CeEEcCCcCHHHHHhccEEcCCCCcchHHHHHHHHHH
Confidence 997 58899987 4789999864 6679999999865
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.9e-24 Score=230.66 Aligned_cols=228 Identities=18% Similarity=0.158 Sum_probs=161.1
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC----CceEEecCCEEEEeC
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE----NLGIAAEHGYFFRLR 647 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~----~~~liaenGa~i~~~ 647 (831)
++|+|+||+||||++ ..+.++++++++|+++.+ .|+.|+++|||+...+..++..+. ..++|++||+.++..
T Consensus 4 ~~kli~fDlDGTLl~---~~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~ 79 (279)
T 4dw8_A 4 KYKLIVLDLDGTLTN---SKKEISSRNRETLIRIQE-QGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINW 79 (279)
T ss_dssp CCCEEEECCCCCCSC---TTSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEET
T ss_pred cceEEEEeCCCCCCC---CCCccCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEEC
Confidence 579999999999999 788899999999999987 599999999999999999887663 478999999999975
Q ss_pred CCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEE----------------eeccCC--------Cc---
Q 044635 648 RDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVW----------------SYEDAD--------PD--- 700 (831)
Q Consensus 648 ~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~----------------~~~~~d--------~~--- 700 (831)
......... ..+.. .+.++++.+.+..-...+...+..... .+...+ +-
T Consensus 80 ~~~~~~~~~-~l~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki 155 (279)
T 4dw8_A 80 ESKEMMYEN-VLPNE---VVPVLYECARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVAKC 155 (279)
T ss_dssp TTCCEEEEC-CCCGG---GHHHHHHHHHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHHHSCSCCSCE
T ss_pred CCCeEEEEe-cCCHH---HHHHHHHHHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHHhhcCCceEE
Confidence 333322111 12222 234444444332111111111100000 000000 00
Q ss_pred ---cchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHc
Q 044635 701 ---FGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVI 777 (831)
Q Consensus 701 ---~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a 777 (831)
......+++.+.+.+.+......+.++..++||+|+++|||.|++++++++ |++++++++|||+.||++||+.+
T Consensus 156 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~i~~GD~~NDi~m~~~a 232 (279)
T 4dw8_A 156 LIVGDAGKLIPVESELCIRLQGKINVFRSEPYFLELVPQGIDKALSLSVLLENI---GMTREEVIAIGDGYNDLSMIKFA 232 (279)
T ss_dssp EEESCHHHHHHHHHHHHHHTTTTCEEEEEETTEEEEECTTCCHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHS
T ss_pred EEeCCHHHHHHHHHHHHHHhcCCEEEEEcCCcEEEEecCCCChHHHHHHHHHHc---CCCHHHEEEECCChhhHHHHHHc
Confidence 011234556666666555444456678999999999999999999999999 99999999999999999999999
Q ss_pred chhcCCCCCCCCCceEEEEeCCC----CcccceEeC--ChhHHHHHHHHHHhh
Q 044635 778 ISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLD--DTVEIVRLMQGLACV 824 (831)
Q Consensus 778 ~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~--d~~eV~~~L~~L~~~ 824 (831)
+ ++|+||++ +..|+|++. +.++|+++|+++...
T Consensus 233 g--------------~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~~~ 271 (279)
T 4dw8_A 233 G--------------MGVAMGNAQEPVKKAADYITLTNDEDGVAEAIERIFNV 271 (279)
T ss_dssp S--------------EEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHHHC--
T ss_pred C--------------cEEEcCCCcHHHHHhCCEEcCCCCCcHHHHHHHHHHhc
Confidence 7 58999987 467999985 578899999987653
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=3.6e-24 Score=229.82 Aligned_cols=226 Identities=14% Similarity=0.197 Sum_probs=161.1
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCCCc
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRRDE 650 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~~~ 650 (831)
++|+|+||+||||++ ..+.+++++.++|+++.+ .|+.|+++|||+...+..++..+. ..++|++||+.++...+.
T Consensus 5 ~~kli~fDlDGTLl~---~~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~ 80 (290)
T 3dnp_A 5 SKQLLALNIDGALLR---SNGKIHQATKDAIEYVKK-KGIYVTLVTNRHFRSAQKIAKSLKLDAKLITHSGAYIAEKIDA 80 (290)
T ss_dssp -CCEEEECCCCCCSC---TTSCCCHHHHHHHHHHHH-TTCEEEEBCSSCHHHHHHHHHHTTCCSCEEEGGGTEEESSTTS
T ss_pred cceEEEEcCCCCCCC---CCCccCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHcCCCCeEEEcCCeEEEcCCCC
Confidence 579999999999999 778899999999999977 599999999999999988887663 348999999999864333
Q ss_pred e-EEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEE-------------------------eeccC-------
Q 044635 651 E-WETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVW-------------------------SYEDA------- 697 (831)
Q Consensus 651 ~-w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~-------------------------~~~~~------- 697 (831)
. +...+ + .+.+.++++.+.+..-...+......... .+...
T Consensus 81 ~~~~~~l---~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (290)
T 3dnp_A 81 PFFEKRI---S---DDHTFNIVQVLESYQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMDE 154 (290)
T ss_dssp CSEECCC---C---HHHHHHHHHHHHTSSCEEEEECSSCEEECCCCCCCHHHHHSCCCCCBTTTBCEEECSCHHHHHHHS
T ss_pred EEEecCC---C---HHHHHHHHHHHHHcCceEEEEECCcEEeeccccchhhhhhhhccccccccccccccCCHHHHHhcC
Confidence 2 22222 1 35567777766543211111111110000 00000
Q ss_pred C-Cc------cchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchh
Q 044635 698 D-PD------FGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSD 770 (831)
Q Consensus 698 d-~~------~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~ND 770 (831)
. +- .......++.+.+...... ...+.++..++||+|+++|||.|++++++++ |++++++++|||+.||
T Consensus 155 ~~~~~ki~~~~~~~~~~~~~~~l~~~~~~-~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~i~~GD~~ND 230 (290)
T 3dnp_A 155 PVSAPVIEVYTEHDIQHDITETITKAFPA-VDVIRVNDEKLNIVPKGVSKEAGLALVASEL---GLSMDDVVAIGHQYDD 230 (290)
T ss_dssp CCCCSEEEEECCGGGHHHHHHHHHHHCTT-EEEEEEETTEEEEEETTCCHHHHHHHHHHHT---TCCGGGEEEEECSGGG
T ss_pred CCCceEEEEeCCHHHHHHHHHHHHhhCCc-EEEEEeCCCeEEEEECCCCHHHHHHHHHHHc---CCCHHHEEEECCchhh
Confidence 0 00 0112334555555333222 2345678999999999999999999999999 9999999999999999
Q ss_pred HHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEeC--ChhHHHHHHHHHHhhh
Q 044635 771 EDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLD--DTVEIVRLMQGLACVA 825 (831)
Q Consensus 771 e~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~--d~~eV~~~L~~L~~~~ 825 (831)
++||+.+| ++|+||++ +..|+|++. +.++|+++|+++....
T Consensus 231 i~m~~~ag--------------~~vam~na~~~~k~~Ad~v~~s~~edGv~~~i~~~~~~~ 277 (290)
T 3dnp_A 231 LPMIELAG--------------LGVAMGNAVPEIKRKADWVTRSNDEQGVAYMMKEYFRMQ 277 (290)
T ss_dssp HHHHHHSS--------------EEEECTTSCHHHHHHSSEECCCTTTTHHHHHHHHHHHHH
T ss_pred HHHHHhcC--------------CEEEecCCcHHHHHhcCEECCCCCccHHHHHHHHHHHhc
Confidence 99999998 57899987 478999985 4677999999987643
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=3.1e-24 Score=227.85 Aligned_cols=223 Identities=15% Similarity=0.209 Sum_probs=154.8
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCce
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEE 651 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~ 651 (831)
.+|+|+||+||||++ ..+.+++++.++|+++.+ +|+.|+++|||+...+..++..+...++|++||+.++..+...
T Consensus 4 M~kli~fDlDGTLl~---~~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~ 79 (274)
T 3fzq_A 4 LYKLLILDIDGTLRD---EVYGIPESAKHAIRLCQK-NHCSVVICTGRSMGTIQDDVLSLGVDGYIAGGGNYIQYHGELL 79 (274)
T ss_dssp CCCEEEECSBTTTBB---TTTBCCHHHHHHHHHHHH-TTCEEEEECSSCTTTSCHHHHTTCCSEEEETTTTEEEETTEEE
T ss_pred cceEEEEECCCCCCC---CCCcCCHHHHHHHHHHHH-CCCEEEEEeCCChHHHHHHHHHcCCCEEEecCccEEEECCEEE
Confidence 468999999999999 677899999999999976 6999999999999999888877755568999999998654333
Q ss_pred EEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEE----------------------Ee-----------ecc--
Q 044635 652 WETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALV----------------------WS-----------YED-- 696 (831)
Q Consensus 652 w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~----------------------~~-----------~~~-- 696 (831)
+...+ + .+.+.++++.+.+..-...+...+.... |. ..+
T Consensus 80 ~~~~l---~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (274)
T 3fzq_A 80 YNQSF---N---QRLIKEVVCLLKKREVAFSIESQEKVFMNQKAKEIFETMNQLKGTNSCINKQHIQEKITYENNIEEYK 153 (274)
T ss_dssp EECCC---C---HHHHHHHHHHHHHHTCEEEEECSSCEEECHHHHHHHHHHHHTTTSCCTTHHHHCCSSSCCCCCGGGCS
T ss_pred EEcCC---C---HHHHHHHHHHHHHCCceEEEEeCCceEeCCchHHHHHHHHhhhccchhhhhhhhhhhcccccchhhhc
Confidence 33322 2 2345555555543211111111111000 00 000
Q ss_pred CCC--ccchHHHHHHHHHHHhHhcCCCeEEEEcC--eEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHH
Q 044635 697 ADP--DFGSCQAKELLDHLESVLANEPVTVKSGQ--NLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDED 772 (831)
Q Consensus 697 ~d~--~~~~~~a~el~~~L~~~l~~~~v~v~~g~--~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~ 772 (831)
.++ .+......+....+.+.+......+.++. .++||.|++++||.|++++++++ |++++++++|||+.||++
T Consensus 154 ~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~i~~GD~~NDi~ 230 (274)
T 3fzq_A 154 SQDIHKICLWSNEKVFDEVKDILQDKMELAQRDISSQYYEIIQKDFHKGKAIKRLQERL---GVTQKETICFGDGQNDIV 230 (274)
T ss_dssp SCCCCEEEEECCHHHHHHHHHHHGGGEEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHH---TCCSTTEEEECCSGGGHH
T ss_pred ccCeEEEEEEcCHHHHHHHHHHhhcceEEEeccCCCceEEEeeCCCCHHHHHHHHHHHc---CCCHHHEEEECCChhHHH
Confidence 000 00000011222333333332223345565 89999999999999999999999 999999999999999999
Q ss_pred HHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEeC--ChhHHHHHHHHH
Q 044635 773 MFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLD--DTVEIVRLMQGL 821 (831)
Q Consensus 773 Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~--d~~eV~~~L~~L 821 (831)
||+.+| ++|+||++ +..|+|+++ +.++|+++|+++
T Consensus 231 m~~~ag--------------~~vam~na~~~~k~~A~~v~~~~~edGv~~~l~~~ 271 (274)
T 3fzq_A 231 MFQASD--------------VTIAMKNSHQQLKDIATSICEDIFDNGIYKELKRR 271 (274)
T ss_dssp HHHTCS--------------EEEEETTSCHHHHHHCSEEECCGGGTHHHHHHHHT
T ss_pred HHHhcC--------------ceEEecCccHHHHHhhhheeCCCchhHHHHHHHHh
Confidence 999997 58899987 468999985 468899999986
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-23 Score=221.96 Aligned_cols=226 Identities=19% Similarity=0.292 Sum_probs=162.5
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHH-HHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCCC
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKT-IDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRRD 649 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~-~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~~ 649 (831)
++|+|++|+||||++ .++.+++++ +++|++|.+ .|+.|+|+|||+...+.+++..+. ..++|++||+.++..+.
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~ 77 (271)
T 1rlm_A 2 AVKVIVTDMDGTFLN---DAKTYNQPRFMAQYQELKK-RGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGK 77 (271)
T ss_dssp CCCEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHH-HTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTE
T ss_pred CccEEEEeCCCCCCC---CCCcCCHHHHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHHhcCCCCEEEECCccEEEECCe
Confidence 468999999999999 677899985 999999987 599999999999999999887763 56899999999987543
Q ss_pred ceEEEcCCcCCccHHHHHHHHHHHHhccC---------CCeeEeeccc------------eEEE--eeccC-CCc-----
Q 044635 650 EEWETCIPVADCGWKQIAEPVMKLYTETT---------DGSTIEDKET------------ALVW--SYEDA-DPD----- 700 (831)
Q Consensus 650 ~~w~~~~~~~~~~w~~~v~~il~~~~e~~---------~gs~ie~k~~------------~l~~--~~~~~-d~~----- 700 (831)
..+...+ + .+.+.++++.+.+.. .+.|...... .+.. .+... ++.
T Consensus 78 ~i~~~~l---~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~i 151 (271)
T 1rlm_A 78 QLFHGEL---T---RHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSL 151 (271)
T ss_dssp EEEECCC---C---HHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEE
T ss_pred EEEEecC---C---HHHHHHHHHHHHhCCCccEEEEeCCCEEeeCCCCHHHHHHHHHhCCCCEEeCchhhCCCceEEEEE
Confidence 2333222 1 345666666655431 2222211100 0000 00000 000
Q ss_pred -cchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 701 -FGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 701 -~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
......+++.+++.+.+......+.++..++||.|++++||.+++++++++ |++++++++|||+.||++||+.++
T Consensus 152 ~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l---~i~~~~~~~~GD~~nD~~m~~~ag- 227 (271)
T 1rlm_A 152 NLPDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRW---DLSPQNVVAIGDSGNDAEMLKMAR- 227 (271)
T ss_dssp ECCGGGHHHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHCS-
T ss_pred EcCHHHHHHHHHHHHHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHh---CCCHHHEEEECCcHHHHHHHHHcC-
Confidence 011235666677766554433345567889999999999999999999999 999999999999999999999997
Q ss_pred hcCCCCCCCCCceEEEEeCCC----CcccceEeCC--hhHHHHHHHHHHhh
Q 044635 780 SMAGPSIAPRAEVFACTVGRK----PSKAKYYLDD--TVEIVRLMQGLACV 824 (831)
Q Consensus 780 ~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~d--~~eV~~~L~~L~~~ 824 (831)
++|+||++ +..|+|++.+ .++|+++|+++...
T Consensus 228 -------------~~va~~na~~~~k~~a~~v~~~~~~dGVa~~l~~~~~~ 265 (271)
T 1rlm_A 228 -------------YSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDN 265 (271)
T ss_dssp -------------EEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHHHHT
T ss_pred -------------CeEEeCCccHHHHHhCCeeCcCCCCChHHHHHHHHHhh
Confidence 46888886 3578999865 57799999998753
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=9.7e-24 Score=223.80 Aligned_cols=222 Identities=17% Similarity=0.176 Sum_probs=151.7
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEE-EeCCCc
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFF-RLRRDE 650 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i-~~~~~~ 650 (831)
.+|+|+||+||||++. ..+.+++++.++|+++.+ .|+.|+++|||+...+ +.+..+...++|++||+.+ +..+..
T Consensus 11 miKli~~DlDGTLl~~--~~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~-~~~~~l~~~~~i~~nGa~i~~~~~~~ 86 (268)
T 3r4c_A 11 MIKVLLLDVDGTLLSF--ETHKVSQSSIDALKKVHD-SGIKIVIATGRAASDL-HEIDAVPYDGVIALNGAECVLRDGSV 86 (268)
T ss_dssp CCCEEEECSBTTTBCT--TTCSCCHHHHHHHHHHHH-TTCEEEEECSSCTTCC-GGGTTSCCCEEEEGGGTEEEETTSCE
T ss_pred ceEEEEEeCCCCCcCC--CCCcCCHHHHHHHHHHHH-CCCEEEEEcCCChHHh-HHHHhcCCCcEEEeCCcEEEEcCCeE
Confidence 5799999999999982 256899999999999987 5999999999999887 5566665568899999999 776533
Q ss_pred eEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEe--------ec---cCCCccchH--H------------
Q 044635 651 EWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWS--------YE---DADPDFGSC--Q------------ 705 (831)
Q Consensus 651 ~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~--------~~---~~d~~~~~~--~------------ 705 (831)
.+...+ + .+.+.++++.+.+..-...+...+...... ++ ...+..... .
T Consensus 87 ~~~~~l---~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (268)
T 3r4c_A 87 IRKVAI---P---AQDFRKSMELAREFDFAVALELNEGVFVNRLTPTVEQIAGIVEHPVPPVVDIEEMFERKECCQLCFY 160 (268)
T ss_dssp EEECCC---C---HHHHHHHHHHHHHTTCEEEEEETTEEEESCCCHHHHHHHHHHTCCCCCBCCHHHHHHHSCCCCEEEE
T ss_pred EEEecC---C---HHHHHHHHHHHHHcCcEEEEEECCEEEEeCCcHHHHHHHHHcCCCCCcccchHHHhccCceEEEEEe
Confidence 333222 2 234555665554321111111111111000 00 000000000 0
Q ss_pred -HHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCC
Q 044635 706 -AKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGP 784 (831)
Q Consensus 706 -a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~ 784 (831)
..+....+.+.+.+ ...+.++..++||.|+++|||.|++++++++ |++++++++|||+.||++||+.++
T Consensus 161 ~~~~~~~~~~~~~~~-~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~ia~GD~~NDi~m~~~ag------ 230 (268)
T 3r4c_A 161 FDEEAEQKVMPLLSG-LSATRWHPLFADVNVAGTSKATGLSLFADYY---RVKVSEIMACGDGGNDIPMLKAAG------ 230 (268)
T ss_dssp CCHHHHHHHGGGCTT-EEEEEEETTEEEEEETTCCHHHHHHHHHHHT---TCCGGGEEEEECSGGGHHHHHHSS------
T ss_pred cChHHHHHHHHhCCC-cEEEEecCCeEEEeeCCCCHHHHHHHHHHHc---CCCHHHEEEECCcHHhHHHHHhCC------
Confidence 00111122222221 1345568899999999999999999999999 999999999999999999999998
Q ss_pred CCCCCCceEEEEeCCC----CcccceEeC--ChhHHHHHHHHH
Q 044635 785 SIAPRAEVFACTVGRK----PSKAKYYLD--DTVEIVRLMQGL 821 (831)
Q Consensus 785 ~~~~~~~~~~v~vG~~----~s~A~y~l~--d~~eV~~~L~~L 821 (831)
++|+||++ +..|+|++. +.++|+++|+++
T Consensus 231 --------~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~~ 265 (268)
T 3r4c_A 231 --------IGVAMGNASEKVQSVADFVTDTVDNSGLYKALKHF 265 (268)
T ss_dssp --------EEEECTTSCHHHHHTCSEECCCTTTTHHHHHHHHT
T ss_pred --------CeEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHHHh
Confidence 57899986 467999984 578999999986
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.5e-24 Score=229.71 Aligned_cols=225 Identities=15% Similarity=0.153 Sum_probs=134.8
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC----CceEEecCCEEEEe-
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE----NLGIAAEHGYFFRL- 646 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~----~~~liaenGa~i~~- 646 (831)
++|+|+||+||||++ ..+.+++++.++|+++.+ .|+.|+++|||+...+.+++..+. ..++|++||+ +..
T Consensus 4 ~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa-i~~~ 78 (279)
T 3mpo_A 4 TIKLIAIDIDGTLLN---EKNELAQATIDAVQAAKA-QGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGS-VAQT 78 (279)
T ss_dssp -CCEEEECC--------------CHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGT-EEEE
T ss_pred ceEEEEEcCcCCCCC---CCCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcE-EEEC
Confidence 479999999999999 778899999999999977 599999999999999998887652 2479999999 553
Q ss_pred CCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEE-------------------Eeec---cC--CCcc-
Q 044635 647 RRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALV-------------------WSYE---DA--DPDF- 701 (831)
Q Consensus 647 ~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~-------------------~~~~---~~--d~~~- 701 (831)
..+....... .+ .+.+.++++.+.+..-...+...+.... ..+. .. +...
T Consensus 79 ~~~~~~~~~~--~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (279)
T 3mpo_A 79 ISGKVLTNHS--LT---YEDYIDLEAWARKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTIS 153 (279)
T ss_dssp TTSCEEEECC--CC---HHHHHHHHHHHHHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCC
T ss_pred CCCCEEEecC--CC---HHHHHHHHHHHHHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcE
Confidence 4333322221 11 2345556655543211111111110000 0000 00 0000
Q ss_pred ------chHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHH
Q 044635 702 ------GSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFE 775 (831)
Q Consensus 702 ------~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~ 775 (831)
.....+++.+.+.+.+.+....+.++..++||+|+++|||.|++++++++ |++++++++|||+.||++||+
T Consensus 154 ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~i~~GD~~NDi~m~~ 230 (279)
T 3mpo_A 154 KAMFVDYPQVIEQVKANMPQDFKDRFSVVQSAPYFIEVMNRRASKGGTLSELVDQL---GLTADDVMTLGDQGNDLTMIK 230 (279)
T ss_dssp EEEEECCHHHHHHHHHHCCHHHHHHEEEECCSSSEEEEEESSCCHHHHHHHHHHHT---TCCGGGEEEC--CCTTHHHHH
T ss_pred EEEEcCCHHHHHHHHHHHHHHhCCCEEEEEecCceEEEecCCCChHHHHHHHHHHc---CCCHHHEEEECCchhhHHHHH
Confidence 11223344444433333222345578899999999999999999999999 999999999999999999999
Q ss_pred HcchhcCCCCCCCCCceEEEEeCCC----CcccceEeC--ChhHHHHHHHHHHh
Q 044635 776 VIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLD--DTVEIVRLMQGLAC 823 (831)
Q Consensus 776 ~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~--d~~eV~~~L~~L~~ 823 (831)
.++ ++|+||++ +..|+|++. +.++|+++|+++..
T Consensus 231 ~ag--------------~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~~ 270 (279)
T 3mpo_A 231 YAG--------------LGVAMGNAIDEVKEAAQAVTLTNAENGVAAAIRKYAL 270 (279)
T ss_dssp HST--------------EECBC---CCHHHHHCSCBC------CHHHHHC----
T ss_pred hcC--------------ceeeccCCCHHHHHhcceeccCCCccHHHHHHHHHhc
Confidence 998 46777775 467888874 67889999998753
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.91 E-value=8.4e-24 Score=229.07 Aligned_cols=226 Identities=20% Similarity=0.246 Sum_probs=156.5
Q ss_pred cCceeEEecCCCccCCCCCC-CCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHh--CCCC--C---ceEEecCCE
Q 044635 571 TTTRAILLDYDGTLMPQASI-DKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWF--SPCE--N---LGIAAEHGY 642 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~~-~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~--~~~~--~---~~liaenGa 642 (831)
.++|+|++|+||||++ . ++.++++++++|++|.+ .|+.|+++|||+...+..++ ..+. . .++|++||+
T Consensus 25 M~ikli~~DlDGTLl~---~~~~~is~~~~~al~~l~~-~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~~~~~~~I~~NGa 100 (301)
T 2b30_A 25 ADIKLLLIDFDGTLFV---DKDIKVPSENIDAIKEAIE-KGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGT 100 (301)
T ss_dssp CCCCEEEEETBTTTBC---CTTTCSCHHHHHHHHHHHH-HTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGT
T ss_pred ccccEEEEECCCCCcC---CCCCccCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHhhHHhhcccccCCCeEEEcCCe
Confidence 3579999999999999 6 78899999999999987 49999999999999998888 5442 1 469999999
Q ss_pred EEEeC-CCceEEEcCCcCCccHHHHHHHHHHHHhccC----------CCeeEeecc-ce--------EEEeeccC-----
Q 044635 643 FFRLR-RDEEWETCIPVADCGWKQIAEPVMKLYTETT----------DGSTIEDKE-TA--------LVWSYEDA----- 697 (831)
Q Consensus 643 ~i~~~-~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~----------~gs~ie~k~-~~--------l~~~~~~~----- 697 (831)
.++.. +...+...+ + .+.+.++++.+.+.. .+.|.+... .. ..++++..
T Consensus 101 ~i~~~~~~~i~~~~l---~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (301)
T 2b30_A 101 IVYDQIGYTLLDETI---E---TDVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEML 174 (301)
T ss_dssp EEECTTCCEEEECCC---C---HHHHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECHHHHT
T ss_pred EEEeCCCCEEEEccC---C---HHHHHHHHHHHHHcCCceEEEEEeCCEEEEcCchHHHHHHHHhhccCCceeecchhhh
Confidence 99874 222233222 2 233444444433211 111221100 00 00001100
Q ss_pred C--Cc-----c-chHHHHHHHHHHHhHhcCCCeEE-EEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCc
Q 044635 698 D--PD-----F-GSCQAKELLDHLESVLANEPVTV-KSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDR 768 (831)
Q Consensus 698 d--~~-----~-~~~~a~el~~~L~~~l~~~~v~v-~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~ 768 (831)
+ +- + ......++.+.+.+.+.. .+.+ .++..++||+|++++||.|++++++.+ |++++++++|||+.
T Consensus 175 ~~~~i~ki~~~~~~~~~~~~~~~l~~~~~~-~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~---~~~~~~~~~~GD~~ 250 (301)
T 2b30_A 175 KYRTMNKLMIVLDPSESKTVIGNLKQKFKN-KLTIFTTYNGHAEVTKLGHDKYTGINYLLKHY---NISNDQVLVVGDAE 250 (301)
T ss_dssp TCCCCSEEEECCCTTTHHHHHHHHHHHSTT-TEEEEECTTSCEEEEETTCCHHHHHHHHHHHT---TCCGGGEEEEECSG
T ss_pred ccCCceEEEEECCHHHHHHHHHHHHHHhcC-CEEEEEeCCcceEecCCCCCcHHHHHHHHHHc---CCCHHHEEEECCCH
Confidence 0 00 0 011244556666554433 3444 457789999999999999999999998 99999999999999
Q ss_pred hhHHHHHHcchhcCCCCCCCCCceEEEEeCCCC----cccceEeC-C--hhHHHHHHHHHHhh
Q 044635 769 SDEDMFEVIISSMAGPSIAPRAEVFACTVGRKP----SKAKYYLD-D--TVEIVRLMQGLACV 824 (831)
Q Consensus 769 NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~----s~A~y~l~-d--~~eV~~~L~~L~~~ 824 (831)
||++||+.++ ++|+||++. ..|+|+++ + .++|+++|+++...
T Consensus 251 nD~~m~~~ag--------------~~va~~na~~~~k~~a~~v~~~~~~~dGVa~~l~~~~~~ 299 (301)
T 2b30_A 251 NDIAMLSNFK--------------YSFAVANATDSAKSHAKCVLPVSHREGAVAYLLKKVFDL 299 (301)
T ss_dssp GGHHHHHSCS--------------EEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHTT
T ss_pred HHHHHHHHcC--------------CeEEEcCCcHHHHhhCCEEEccCCCCcHHHHHHHHHHhc
Confidence 9999999997 578888863 47899886 4 67899999988643
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.3e-23 Score=219.91 Aligned_cols=223 Identities=14% Similarity=0.130 Sum_probs=151.3
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCce
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEE 651 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~ 651 (831)
++|+|++|+||||++ .++.++++++++|+++.+ .|+.|+++|||+...+..++..+....+|+.||+++...+...
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~-~G~~~~~aTGR~~~~~~~~~~~l~~~~~i~~nGa~i~~~~~~i 77 (258)
T 2pq0_A 2 GRKIVFFDIDGTLLD---EQKQLPLSTIEAVRRLKQ-SGVYVAIATGRAPFMFEHVRKQLGIDSFVSFNGQYVVFEGNVL 77 (258)
T ss_dssp CCCEEEECTBTTTBC---TTSCCCHHHHHHHHHHHH-TTCEEEEECSSCGGGSHHHHHHHTCCCEEEGGGTEEEETTEEE
T ss_pred CceEEEEeCCCCCcC---CCCccCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHhcCCCEEEECCCCEEEECCEEE
Confidence 368999999999999 667899999999999976 6999999999999988877765532347899999998754333
Q ss_pred EEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEE----------------eeccCCCcc-------c--hHHH
Q 044635 652 WETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVW----------------SYEDADPDF-------G--SCQA 706 (831)
Q Consensus 652 w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~----------------~~~~~d~~~-------~--~~~a 706 (831)
+...++ .+.+.++++.+.+..-...+......... .+....+.+ . ....
T Consensus 78 ~~~~~~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 151 (258)
T 2pq0_A 78 YKQPLR------REKVRALTEEAHKNGHPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLYYENKDIYQALLFCR 151 (258)
T ss_dssp EECCCC------HHHHHHHHHHHHHTTCCEEEECSSCEEESSSSCHHHHHHHHHTTCCCCCBCTTGGGGSCCCEEEECSC
T ss_pred EEecCC------HHHHHHHHHHHHhCCCeEEEEeCCcEEEecCCcHHHHHHHHhhcCCccccccchhhccCceEEEEECC
Confidence 332221 34566666655432111111100000000 000000000 0 0000
Q ss_pred HHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCC
Q 044635 707 KELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSI 786 (831)
Q Consensus 707 ~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~ 786 (831)
++....+.+.+... ..+.++..++||.|+++|||.|++++++++ |++++++++|||+.||++||+.++
T Consensus 152 ~~~~~~~~~~~~~~-~~~~~~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~~~ia~GDs~NDi~ml~~ag-------- 219 (258)
T 2pq0_A 152 AEEEEPYVRNYPEF-RFVRWHDVSTDVLPAGGSKAEGIRMMIEKL---GIDKKDVYAFGDGLNDIEMLSFVG-------- 219 (258)
T ss_dssp HHHHHHHHHHCTTE-EEEEEETTEEEEEESSCCHHHHHHHHHHHH---TCCGGGEEEECCSGGGHHHHHHSS--------
T ss_pred HHHHHHHHHhCCCe-EEEEeCCceEEEEECCCChHHHHHHHHHHh---CCCHHHEEEECCcHHhHHHHHhCC--------
Confidence 01122233233321 234567889999999999999999999999 999999999999999999999998
Q ss_pred CCCCceEEEEeCCC----CcccceEeC--ChhHHHHHHHHHH
Q 044635 787 APRAEVFACTVGRK----PSKAKYYLD--DTVEIVRLMQGLA 822 (831)
Q Consensus 787 ~~~~~~~~v~vG~~----~s~A~y~l~--d~~eV~~~L~~L~ 822 (831)
++|+|||+ +..|+|++. +.++|+++|+++.
T Consensus 220 ------~~vam~na~~~~k~~A~~v~~~~~~dGva~~i~~~~ 255 (258)
T 2pq0_A 220 ------TGVAMGNAHEEVKRVADFVTKPVDKEGIWYGLKQLQ 255 (258)
T ss_dssp ------EEEEETTCCHHHHHTCSEEECCGGGTHHHHHHHHTT
T ss_pred ------cEEEeCCCcHHHHHhCCEEeCCCCcchHHHHHHHhC
Confidence 57889986 467999885 5788999999864
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.8e-23 Score=224.24 Aligned_cols=227 Identities=14% Similarity=0.195 Sum_probs=152.7
Q ss_pred ceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-C---ceEEecCCEEEEeCC
Q 044635 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-N---LGIAAEHGYFFRLRR 648 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~---~~liaenGa~i~~~~ 648 (831)
+|+|++|+||||++ .++.++++++++|++|.+ .|+.|+++|||+...+..++..+. . .++|++||+.++...
T Consensus 5 ~kli~~DlDGTLl~---~~~~i~~~~~~aL~~l~~-~Gi~vviaTGR~~~~~~~~~~~l~l~~~~~~~I~~NGa~i~~~~ 80 (282)
T 1rkq_A 5 IKLIAIDMDGTLLL---PDHTISPAVKNAIAAARA-RGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAA 80 (282)
T ss_dssp CCEEEECCCCCCSC---TTSCCCHHHHHHHHHHHH-TTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETT
T ss_pred ceEEEEeCCCCCCC---CCCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCCCCCCCeEEEeCCeEEEECC
Confidence 68999999999999 678899999999999976 599999999999999988887652 1 369999999999842
Q ss_pred --CceEEEcCCcCCccHHHHHHHHHHHHhc-----cCCCeeEeecc---c--------eEEEee---ccC--CCcc----
Q 044635 649 --DEEWETCIPVADCGWKQIAEPVMKLYTE-----TTDGSTIEDKE---T--------ALVWSY---EDA--DPDF---- 701 (831)
Q Consensus 649 --~~~w~~~~~~~~~~w~~~v~~il~~~~e-----~~~gs~ie~k~---~--------~l~~~~---~~~--d~~~---- 701 (831)
...+...+ +..+...+.+.++.+.- ...+.|...+. . .+.... .+. +...
T Consensus 81 ~~~~i~~~~l---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~ 157 (282)
T 1rkq_A 81 DGSTVAQTAL---SYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVM 157 (282)
T ss_dssp TCCEEEECCB---CHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEE
T ss_pred CCeEEEEecC---CHHHHHHHHHHHHHcCCEEEEEECCEEEEcCCchhHHHHHHhhhccCCccccchhHhcccCCceEEE
Confidence 22333322 23333333333332210 01122222110 0 000000 000 0000
Q ss_pred ---chHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcc
Q 044635 702 ---GSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVII 778 (831)
Q Consensus 702 ---~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~ 778 (831)
.....+++.+.+.+.+...-..+.++..++||+|++++||.+++++++.+ |++++++++|||+.||++||+.++
T Consensus 158 ~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~---~~~~~~~~~~GD~~nD~~m~~~ag 234 (282)
T 1rkq_A 158 MIDEPAILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVL---GIKPEEIMAIGDQENDIAMIEYAG 234 (282)
T ss_dssp EECCHHHHHHHHHHSCHHHHHHEEEEEEETTEEEEEETTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSS
T ss_pred EECCHHHHHHHHHHHHHHhcCCEEEEEeCCceEEecCCCCCCHHHHHHHHHHh---CCCHHHEEEECCcHHHHHHHHHCC
Confidence 01122333333332222111234478889999999999999999999998 999999999999999999999997
Q ss_pred hhcCCCCCCCCCceEEEEeCCCC----cccceEeCC--hhHHHHHHHHHHh
Q 044635 779 SSMAGPSIAPRAEVFACTVGRKP----SKAKYYLDD--TVEIVRLMQGLAC 823 (831)
Q Consensus 779 ~~~~~~~~~~~~~~~~v~vG~~~----s~A~y~l~d--~~eV~~~L~~L~~ 823 (831)
++|+||+.. ..|+|++++ .++|+++|+++..
T Consensus 235 --------------~~va~~n~~~~~~~~a~~v~~~~~~dGV~~~l~~~~~ 271 (282)
T 1rkq_A 235 --------------VGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKYVL 271 (282)
T ss_dssp --------------EEEECTTSCHHHHHHCSEECCCTTTTHHHHHHHHHTT
T ss_pred --------------cEEEecCCcHHHHhhCCEEecCCCcchHHHHHHHHHh
Confidence 578888863 478998864 6789999998764
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=7.6e-24 Score=224.69 Aligned_cols=220 Identities=17% Similarity=0.179 Sum_probs=140.5
Q ss_pred HHHHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCC----C-CCceEEec
Q 044635 565 VSAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSP----C-ENLGIAAE 639 (831)
Q Consensus 565 ~~~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~----~-~~~~liae 639 (831)
..+|++.++|+|++|+||||++ .++.++++++++|++|.+ . +.|+|+|||+...+.+.++. + ...++|++
T Consensus 5 ~~~~~~~~~kli~~DlDGTLl~---~~~~is~~~~~al~~l~~-~-i~v~iaTGR~~~~~~~~l~~~~~~~~~~~~~I~~ 79 (262)
T 2fue_A 5 AQAARRKERVLCLFDVDGTLTP---ARQKIDPEVAAFLQKLRS-R-VQIGVVGGSDYCKIAEQLGDGDEVIEKFDYVFAE 79 (262)
T ss_dssp --------CEEEEEESBTTTBS---TTSCCCHHHHHHHHHHTT-T-SEEEEECSSCHHHHHHHHSSTTTHHHHCSEEEEG
T ss_pred cccccccCeEEEEEeCccCCCC---CCCcCCHHHHHHHHHHHh-C-CEEEEEcCCCHHHHHHHHhhhhcccccCCeEEEC
Confidence 4567888899999999999999 678899999999999965 5 99999999999999888864 1 12478999
Q ss_pred CCEEEEeCCCceEEEcCCcCCccHHHHHHHHHHHHhc--------cCCCeeEeeccceEEEe-e-ccCCCc----cc---
Q 044635 640 HGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTE--------TTDGSTIEDKETALVWS-Y-EDADPD----FG--- 702 (831)
Q Consensus 640 nGa~i~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e--------~~~gs~ie~k~~~l~~~-~-~~~d~~----~~--- 702 (831)
||+.++..+...+...+.. .-..+.+.++++...+ ..++.+++.+.....+. + +..+.. +.
T Consensus 80 NGa~i~~~~~~i~~~~~~~--~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (262)
T 2fue_A 80 NGTVQYKHGRLLSKQTIQN--HLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELD 157 (262)
T ss_dssp GGTEEEETTEECCCCCHHH--HHCHHHHHHHHHHHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTCCHHHHHHHHHHH
T ss_pred CCcEEEeCCeEEEEeeccc--cCCHHHHHHHHHHHHHcCceEEEEeCCeEEEechHHhhhHHhhcCCCcccccccEEEEc
Confidence 9999987432222211100 0013444444443322 12344544332222111 1 111110 00
Q ss_pred --hHHHHHHHHHHHhHhcCCCeEEE-EcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcC----CchhHHHHH
Q 044635 703 --SCQAKELLDHLESVLANEPVTVK-SGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGD----DRSDEDMFE 775 (831)
Q Consensus 703 --~~~a~el~~~L~~~l~~~~v~v~-~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD----~~NDe~Mf~ 775 (831)
.....++.+.+.+.+.+..+.+. ++..++||+|+++|||.|+++| + |+++++++|||| +.||++||+
T Consensus 158 ~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~leI~~~~vsKg~al~~l---~---gi~~~~viafGDs~~~~~NDi~Ml~ 231 (262)
T 2fue_A 158 KKEKIREKFVEALKTEFAGKGLRFSRGGMISFDVFPEGWDKRYCLDSL---D---QDSFDTIHFFGNETSPGGNDFEIFA 231 (262)
T ss_dssp HHHCHHHHHHHHHHHHTTTSCEEEECCSSSCEEEEETTCSTTHHHHHH---T---TSCCSEEEEEESCCSTTSTTHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCceEEEEECCCcEEEEecCCCCHHHHHHHH---H---CCCHHHEEEECCCCCCCCCCHHHHh
Confidence 01123344455554443345555 4678999999999999999999 5 899999999999 999999999
Q ss_pred HcchhcCCCCCCCCCceEEEEeCCC----CcccceEeCC
Q 044635 776 VIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLDD 810 (831)
Q Consensus 776 ~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~d 810 (831)
.++. .+++|||+ +..|+|++++
T Consensus 232 ~~~~-------------~g~av~NA~~~~k~~a~~v~~~ 257 (262)
T 2fue_A 232 DPRT-------------VGHSVVSPQDTVQRCREIFFPE 257 (262)
T ss_dssp STTS-------------EEEECSSHHHHHHHHHHHHCTT
T ss_pred cCcc-------------CcEEecCCCHHHHHhhheeCCC
Confidence 9863 36788875 4566676643
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-23 Score=223.52 Aligned_cols=218 Identities=17% Similarity=0.160 Sum_probs=132.6
Q ss_pred cCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-C-ceEEecCCEEEEeCC
Q 044635 571 TTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-N-LGIAAEHGYFFRLRR 648 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~-~~liaenGa~i~~~~ 648 (831)
.++|+|++|+||||++ .++.++++++++|++|.+ .|+.|+|+|||+...+..++..+. . .++|++||+.++...
T Consensus 7 m~~~li~~DlDGTLl~---~~~~~~~~~~~~l~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~ 82 (275)
T 1xvi_A 7 QQPLLVFSDLDGTLLD---SHSYDWQPAAPWLTRLRE-ANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAE 82 (275)
T ss_dssp CCCEEEEEECTTTTSC---SSCCSCCTTHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCT
T ss_pred cCceEEEEeCCCCCCC---CCCcCCHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEEeCCCeEEecC
Confidence 3579999999999998 556677889999999976 699999999999999999987663 2 269999999998332
Q ss_pred -Cc------eEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeec------------------------cceEEEeeccC
Q 044635 649 -DE------EWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDK------------------------ETALVWSYEDA 697 (831)
Q Consensus 649 -~~------~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k------------------------~~~l~~~~~~~ 697 (831)
+. .+...++ .+.+.++++.+.+..+..+.... +......+. .
T Consensus 83 ~~~~~~~~~~~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 155 (275)
T 1xvi_A 83 QWQEIDGFPRIISGIS------HGEISLVLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWR-D 155 (275)
T ss_dssp TCTTSTTTTEEECSSC------HHHHHHHHHHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEEC-S
T ss_pred cccccCceEEEecCCC------HHHHHHHHHHHHHhhCcceeccCcCCHHHHHHhhCCchHHHHHHHhhccCceeEec-C
Confidence 11 2333221 23444455443221111111000 000001110 0
Q ss_pred CCccchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcC-CCccc--EEEEcCCchhHHHH
Q 044635 698 DPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQERE-MLPDF--VLCVGDDRSDEDMF 774 (831)
Q Consensus 698 d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g-~~~d~--vla~GD~~NDe~Mf 774 (831)
......++.+.+.+ ..+.+.++..++||+|++++||.|++++++++ | +++++ +++|||+.||++||
T Consensus 156 ----~~~~~~~~~~~l~~----~~~~~~~~~~~leI~~~~~~K~~~l~~l~~~~---~~~~~~~~~~~~~GD~~nD~~m~ 224 (275)
T 1xvi_A 156 ----SDERMAQFTARLNE----LGLQFMQGARFWHVLDASAGKDQAANWIIATY---QQLSGKRPTTLGLGDGPNDAPLL 224 (275)
T ss_dssp ----CHHHHHHHHHHHHH----TTEEEEECSSCEEEEETTCCHHHHHHHHHHHH---HHHHSSCCEEEEEESSGGGHHHH
T ss_pred ----CHHHHHHHHHHHHh----hCeEEEECCceEEEecCCCCHHHHHHHHHHHh---hhcccccCcEEEECCChhhHHHH
Confidence 01122333333432 24666677889999999999999999999998 7 88889 99999999999999
Q ss_pred HHcchhcCCCCCCCCCceEEEEeCCCC----c-----ccc-eEe--CChhHHHHHHHHHHhh
Q 044635 775 EVIISSMAGPSIAPRAEVFACTVGRKP----S-----KAK-YYL--DDTVEIVRLMQGLACV 824 (831)
Q Consensus 775 ~~a~~~~~~~~~~~~~~~~~v~vG~~~----s-----~A~-y~l--~d~~eV~~~L~~L~~~ 824 (831)
+.++ ++|+||++. . .|+ |++ ++.++|+++|+++...
T Consensus 225 ~~ag--------------~~va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~l~~~l~~ 272 (275)
T 1xvi_A 225 EVMD--------------YAVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLDHFFSA 272 (275)
T ss_dssp HTSS--------------EEEECCCCC-----------------------------------
T ss_pred HhCC--------------ceEEecCCCccchhhccccCCceeEccCCCchHHHHHHHHHHHh
Confidence 9997 467787752 1 267 776 4678999999987653
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.90 E-value=9.8e-23 Score=216.77 Aligned_cols=224 Identities=15% Similarity=0.135 Sum_probs=154.1
Q ss_pred ceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-Cc-eEEecCCEEEEeCCCc
Q 044635 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NL-GIAAEHGYFFRLRRDE 650 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~-~liaenGa~i~~~~~~ 650 (831)
+|+|++|+||||++ .++.++++++++|++ .+ .|+.|+++|||+...+..++..+. .. ++|++||+.++.. +.
T Consensus 2 ikli~~DlDGTLl~---~~~~i~~~~~~al~~-~~-~Gi~v~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~-~~ 75 (268)
T 1nf2_A 2 YRVFVFDLDGTLLN---DNLEISEKDRRNIEK-LS-RKCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLP-EE 75 (268)
T ss_dssp BCEEEEECCCCCSC---TTSCCCHHHHHHHHH-HT-TTSEEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEET-TT
T ss_pred ccEEEEeCCCcCCC---CCCccCHHHHHHHHH-Hh-CCCEEEEECCCChHHHHHHHHHhCCCCCeEEEeCCeEEECC-CC
Confidence 58999999999999 678899999999999 65 699999999999999988886553 22 6999999999885 22
Q ss_pred eEEEcCCcCCccHHHHHHHHHHHHhcc--------CCCeeEeeccc---------eEEEe-eccC-C----Ccc------
Q 044635 651 EWETCIPVADCGWKQIAEPVMKLYTET--------TDGSTIEDKET---------ALVWS-YEDA-D----PDF------ 701 (831)
Q Consensus 651 ~w~~~~~~~~~~w~~~v~~il~~~~e~--------~~gs~ie~k~~---------~l~~~-~~~~-d----~~~------ 701 (831)
+..... ..+ .+.+.++++.+.+. ..+.+...+.. .+... +... + ...
T Consensus 76 ~~i~~~-~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~ 151 (268)
T 1nf2_A 76 GVILNE-KIP---PEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLI 151 (268)
T ss_dssp EEEEEC-CBC---HHHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHHHHHCBSEEEEE
T ss_pred CEEEec-CCC---HHHHHHHHHHHHhCCCEEEEEECCEEEECCChHHHHHHHhhcCCceEecCCHHHhcccCCceEEEEE
Confidence 322111 122 23455555554432 11222221100 00000 0000 0 000
Q ss_pred -chHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchh
Q 044635 702 -GSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISS 780 (831)
Q Consensus 702 -~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~ 780 (831)
......++.+.+.+.+......+.++..++||+|++++||.+++++++++ |++++++++|||+.||++|++.++
T Consensus 152 ~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~---~~~~~~~~~~GD~~nD~~~~~~ag-- 226 (268)
T 1nf2_A 152 DTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERM---NWKKEEIVVFGDNENDLFMFEEAG-- 226 (268)
T ss_dssp CCHHHHHHHHHHHHHHHTTTSEEEEEETTEEEEECTTCCHHHHHHHHHHHH---TCCGGGEEEEECSHHHHHHHTTCS--
T ss_pred CCHHHHHHHHHHHHHHhcCCEEEEEecCceEEEeCCCCChHHHHHHHHHHc---CCCHHHeEEEcCchhhHHHHHHcC--
Confidence 01123445555555443322334577889999999999999999999998 999999999999999999999997
Q ss_pred cCCCCCCCCCceEEEEeCCCC----cccceEeCC--hhHHHHHHHHHHh
Q 044635 781 MAGPSIAPRAEVFACTVGRKP----SKAKYYLDD--TVEIVRLMQGLAC 823 (831)
Q Consensus 781 ~~~~~~~~~~~~~~v~vG~~~----s~A~y~l~d--~~eV~~~L~~L~~ 823 (831)
++|+||++. ..|+|++.+ .++|+++|+++.+
T Consensus 227 ------------~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~i~~~~~ 263 (268)
T 1nf2_A 227 ------------LRVAMENAIEKVKEASDIVTLTNNDSGVSYVLERIST 263 (268)
T ss_dssp ------------EEEECTTSCHHHHHHCSEECCCTTTTHHHHHHTTBCB
T ss_pred ------------CEEEecCCCHHHHhhCCEEEccCCcchHHHHHHHHHH
Confidence 478888863 468998864 6789999988753
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4e-23 Score=217.15 Aligned_cols=216 Identities=14% Similarity=0.091 Sum_probs=151.2
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC---CCceEEecCCEEEEeCC
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC---ENLGIAAEHGYFFRLRR 648 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~---~~~~liaenGa~i~~~~ 648 (831)
++|+|++|+||||++ .++.++++++++|++|.+ +|+.|+|+|||++..+.+.++.- ...++|++||+.++..+
T Consensus 3 ~~kli~~DlDGTLl~---~~~~i~~~~~~~l~~l~~-~g~~~~iaTGR~~~~~~~~l~~~~~~~~~~~i~~NGa~i~~~~ 78 (246)
T 3f9r_A 3 KRVLLLFDVDGTLTP---PRLCQTDEMRALIKRARG-AGFCVGTVGGSDFAKQVEQLGRDVLTQFDYVFAENGLLAYRNG 78 (246)
T ss_dssp CSEEEEECSBTTTBS---TTSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHCTTHHHHCSEEEEGGGTEEEETT
T ss_pred CceEEEEeCcCCcCC---CCCccCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHhhhhccccCCEEEECCCcEEEECC
Confidence 579999999999999 778899999999999987 69999999999999998888731 13589999999999875
Q ss_pred CceEEEcCC-cCCccHHHHHHHHHHHHh-----ccCCCeeEeeccceEEEe--eccCCC----ccchH-----HHHHHHH
Q 044635 649 DEEWETCIP-VADCGWKQIAEPVMKLYT-----ETTDGSTIEDKETALVWS--YEDADP----DFGSC-----QAKELLD 711 (831)
Q Consensus 649 ~~~w~~~~~-~~~~~w~~~v~~il~~~~-----e~~~gs~ie~k~~~l~~~--~~~~d~----~~~~~-----~a~el~~ 711 (831)
...|...++ ..+..+...+.+.++.+. ....+.|++.+...+.+. .+.... .+... ..+++.+
T Consensus 79 ~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (246)
T 3f9r_A 79 LEIHRQSLLNALGNDRIVKFVKKTLRLIADLDIPVQRGTFVEYRNGMINVSPIGRNCSQAERDEFEVYDNEHRVRASLIA 158 (246)
T ss_dssp EEEEECCHHHHTCHHHHHHHHHHHHHHHHTCCCSCCCSCCEEECSSCEEECSSCTTSCHHHHHHHHHHHHHHCHHHHHHH
T ss_pred EEEEEeeccccCCHHHHHHHHHHHHhhhhceeeecCCceEEEeecceeccccccccCchhhceeeeEecccchHHHHHHH
Confidence 445554321 012233333333333332 123467777665544432 111110 01000 1244555
Q ss_pred HHHhHhcCCCe-EEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCC----chhHHHHHHcchhcCCCCC
Q 044635 712 HLESVLANEPV-TVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDD----RSDEDMFEVIISSMAGPSI 786 (831)
Q Consensus 712 ~L~~~l~~~~v-~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~----~NDe~Mf~~a~~~~~~~~~ 786 (831)
.+.+.+.+..+ .+.++..++||+|+|+|||.|+++|++ ++++++||||+ .||++||+.++.
T Consensus 159 ~l~~~~~~~~~~~~~sg~~~leI~~~gv~Kg~al~~L~~-------~~~ev~afGD~~~~g~NDi~Ml~~a~~------- 224 (246)
T 3f9r_A 159 ELENSFPDFGLKYSIGGQISFDVFPVGWDKTYCLQFVED-------DFEEIHFFGDKTQEGGNDYEIYTDKRT------- 224 (246)
T ss_dssp HHHHHCGGGCEEEEEETTTEEEEEETTCSGGGGGGGTTT-------TCSEEEEEESCCSTTSTTHHHHTCTTS-------
T ss_pred HHHhhCcCCcEEEEecCCeEEEEEeCCCCHHHHHHHHHc-------CcccEEEEeCCCCCCCCCHHHHhCCCc-------
Confidence 66666655434 467899999999999999999999976 68999999996 999999997652
Q ss_pred CCCCceEEEEeCCCCcccceEeCChhHHHHHHHHHH
Q 044635 787 APRAEVFACTVGRKPSKAKYYLDDTVEIVRLMQGLA 822 (831)
Q Consensus 787 ~~~~~~~~v~vG~~~s~A~y~l~d~~eV~~~L~~L~ 822 (831)
.+++| .++.++++.|+.|+
T Consensus 225 ------~g~~v-----------~n~~~~~~~~~~~~ 243 (246)
T 3f9r_A 225 ------IGHKV-----------TSYKDTIAEVEKII 243 (246)
T ss_dssp ------EEEEC-----------SSHHHHHHHHHHHH
T ss_pred ------cEEEe-----------CCHHHHHHHHHHHh
Confidence 24444 56788888888876
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-23 Score=219.80 Aligned_cols=203 Identities=17% Similarity=0.184 Sum_probs=134.9
Q ss_pred cCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCC-C--CCceEEecCCEEEEeC
Q 044635 571 TTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSP-C--ENLGIAAEHGYFFRLR 647 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~-~--~~~~liaenGa~i~~~ 647 (831)
+++|+|++|+||||++ .++.++++++++|++|.+ . +.|+|+|||+...+.+.++. + ...++|++||+.++..
T Consensus 4 ~~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~-~-i~v~iaTGR~~~~~~~~l~~~~~~~~~~~I~~NGa~i~~~ 78 (246)
T 2amy_A 4 PGPALCLFDVDGTLTA---PRQKITKEMDDFLQKLRQ-K-IKIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYKD 78 (246)
T ss_dssp CCSEEEEEESBTTTBC---TTSCCCHHHHHHHHHHTT-T-SEEEEECSSCHHHHHHHHCTTHHHHCSEEESGGGTEEEET
T ss_pred CCceEEEEECCCCcCC---CCcccCHHHHHHHHHHHh-C-CeEEEEcCCCHHHHHHHhccccccccCEEEECCCcEEEeC
Confidence 4689999999999999 678899999999999976 5 99999999999988888762 2 1247899999999885
Q ss_pred CCceEEEcCC-cCCccHHHHHHHHHHHHhc--------cCCCeeEeeccceEEEe-e-ccCCC----ccc-----hHHHH
Q 044635 648 RDEEWETCIP-VADCGWKQIAEPVMKLYTE--------TTDGSTIEDKETALVWS-Y-EDADP----DFG-----SCQAK 707 (831)
Q Consensus 648 ~~~~w~~~~~-~~~~~w~~~v~~il~~~~e--------~~~gs~ie~k~~~l~~~-~-~~~d~----~~~-----~~~a~ 707 (831)
+...|...++ ..+ .+.+.++++.+.+ ..++.+.+.+.....+. + +.... .+. ....+
T Consensus 79 ~~~i~~~~l~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (246)
T 2amy_A 79 GKLLCRQNIQSHLG---EALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQ 155 (246)
T ss_dssp TEEEEECCHHHHHC---HHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHHHHHHHHHCHHH
T ss_pred CcEEEeeecccccC---HHHHHHHHHHHHhcCceEEEecCCceeEecccceeehhhhcCcCchhhhhhheeecCCHHHHH
Confidence 4333433210 011 2334444433321 22345554333222221 1 11110 010 00122
Q ss_pred HHHHHHHhHhcCCCeEEE-EcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcC----CchhHHHHHHcchhcC
Q 044635 708 ELLDHLESVLANEPVTVK-SGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGD----DRSDEDMFEVIISSMA 782 (831)
Q Consensus 708 el~~~L~~~l~~~~v~v~-~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD----~~NDe~Mf~~a~~~~~ 782 (831)
++.+.+.+.+.+..+.+. ++..++||+|+++|||.|+++| + |+++++++|||| +.||++||+.++.
T Consensus 156 ~~~~~l~~~~~~~~~~~~~s~~~~leI~~~~~~Kg~al~~l---~---~i~~~~viafGD~~~~~~ND~~Ml~~a~~--- 226 (246)
T 2amy_A 156 KFVADLRKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHV---E---NDGYKTIYFFGDKTMPGGNDHEIFTDPRT--- 226 (246)
T ss_dssp HHHHHHHHHTTTSCEEEEEETTTEEEEEETTCSGGGGGGGT---T---TSCCSEEEEEECSCC---CCCHHHHCTTE---
T ss_pred HHHHHHHHhcCCCcEEEEEcCCcEEEEecCCCchHHHHHHH---h---CCCHHHEEEECCCCCCCCCcHHHHHhCCc---
Confidence 344455554543345554 5788999999999999999999 5 899999999999 9999999999863
Q ss_pred CCCCCCCCceEEEEeCCC
Q 044635 783 GPSIAPRAEVFACTVGRK 800 (831)
Q Consensus 783 ~~~~~~~~~~~~v~vG~~ 800 (831)
.+++|||+
T Consensus 227 ----------ag~av~Na 234 (246)
T 2amy_A 227 ----------MGYSVTAP 234 (246)
T ss_dssp ----------EEEECSSH
T ss_pred ----------ceEEeeCC
Confidence 37888886
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.7e-23 Score=217.08 Aligned_cols=214 Identities=17% Similarity=0.197 Sum_probs=143.6
Q ss_pred eeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCC--CC-CceEEecCCEEEEeCC--
Q 044635 574 RAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSP--CE-NLGIAAEHGYFFRLRR-- 648 (831)
Q Consensus 574 rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~--~~-~~~liaenGa~i~~~~-- 648 (831)
++|++|+||||++ .+..+ +++.++|+++. .|+.|+|+|||+...+.++++. +. ..++|++||+.++...
T Consensus 4 ~li~~DlDGTLl~---~~~~~-~~~~~~l~~~~--~gi~v~iaTGR~~~~~~~~~~~l~l~~~~~~I~~NGa~i~~~~~~ 77 (244)
T 1s2o_A 4 LLLISDLDNTWVG---DQQAL-EHLQEYLGDRR--GNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGL 77 (244)
T ss_dssp EEEEECTBTTTBS---CHHHH-HHHHHHHHTTG--GGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEE
T ss_pred eEEEEeCCCCCcC---CHHHH-HHHHHHHHHhc--CCCEEEEEcCCCHHHHHHHHHHcCCCCCCEEEECCCcEEEeCCCc
Confidence 4999999999998 33333 67888888864 3799999999999999988875 32 3579999999998742
Q ss_pred CceEEEcCCcCCccH-HHHHHHHHHHHhccCCCeeE----eeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeE
Q 044635 649 DEEWETCIPVADCGW-KQIAEPVMKLYTETTDGSTI----EDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVT 723 (831)
Q Consensus 649 ~~~w~~~~~~~~~~w-~~~v~~il~~~~e~~~gs~i----e~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~ 723 (831)
...|...+ +..| .+.+..++.. .++... +.+...+.+++.. +......+++.+.+.+. ...+.
T Consensus 78 ~~~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ki~~~~~~---~~~~~~~~~l~~~~~~~--~~~~~ 145 (244)
T 1s2o_A 78 DQHWADYL---SEHWQRDILQAIADG----FEALKPQSPLEQNPWKISYHLDP---QACPTVIDQLTEMLKET--GIPVQ 145 (244)
T ss_dssp CHHHHHHH---HTTCCHHHHHHHHHT----CTTEEECCGGGCBTTBEEEEECT---TSCTHHHHHHHHHHHTS--SCCEE
T ss_pred ChHHHHHH---hccccHHHHHHHHHh----ccCccccCcccCCCeEEEEEeCh---hhHHHHHHHHHHHHHhc--CCCeE
Confidence 11121111 1122 2222222222 222111 1223344444432 11111223333444321 12344
Q ss_pred E-EEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCC-
Q 044635 724 V-KSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKP- 801 (831)
Q Consensus 724 v-~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~- 801 (831)
+ .++..++||+|++++||.|++++++++ |++++++++|||+.||++||+.++ ++|+||+..
T Consensus 146 ~~~s~~~~lei~~~~~~K~~~l~~l~~~~---~~~~~~~~~~GD~~nD~~m~~~~g--------------~~va~~na~~ 208 (244)
T 1s2o_A 146 VIFSSGKDVDLLPQRSNKGNATQYLQQHL---AMEPSQTLVCGDSGNDIGLFETSA--------------RGVIVRNAQP 208 (244)
T ss_dssp EEEETTTEEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEEECSGGGHHHHTSSS--------------EEEECTTCCH
T ss_pred EEEecCceEEeccCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHHHhccC--------------cEEEEcCCcH
Confidence 4 567899999999999999999999998 999999999999999999999876 578888863
Q ss_pred ---cc-------cceEeC--ChhHHHHHHHHHH
Q 044635 802 ---SK-------AKYYLD--DTVEIVRLMQGLA 822 (831)
Q Consensus 802 ---s~-------A~y~l~--d~~eV~~~L~~L~ 822 (831)
.. |+|++. +.++|+++|+++.
T Consensus 209 ~~k~~a~~~~~~a~~v~~~~~~dGva~~i~~~~ 241 (244)
T 1s2o_A 209 ELLHWYDQWGDSRHYRAQSSHAGAILEAIAHFD 241 (244)
T ss_dssp HHHHHHHHHCCTTEEECSSCHHHHHHHHHHHTT
T ss_pred HHHHHHhcccccceeecCCcchhHHHHHHHHhc
Confidence 22 678875 4688999998764
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-21 Score=210.94 Aligned_cols=219 Identities=18% Similarity=0.211 Sum_probs=151.5
Q ss_pred ceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCCCc-
Q 044635 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRRDE- 650 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~~~- 650 (831)
+|+|++|+||||++ .++.++++++++|++|.+ .|+.|+++|||+...+..++..+. ..++|++||+.++...+.
T Consensus 4 ikli~~DlDGTLl~---~~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~ 79 (288)
T 1nrw_A 4 MKLIAIDLDGTLLN---SKHQVSLENENALRQAQR-DGIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGRL 79 (288)
T ss_dssp CCEEEEECCCCCSC---TTSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEECTTCCE
T ss_pred eEEEEEeCCCCCCC---CCCccCHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCeEEEcCCCcE
Confidence 68999999999999 678899999999999976 699999999999999999887663 346999999999874222
Q ss_pred eEEEcCCcCCccHHHHHHHHHHHHhcc--------CCCeeEeecc------c---e----------------------EE
Q 044635 651 EWETCIPVADCGWKQIAEPVMKLYTET--------TDGSTIEDKE------T---A----------------------LV 691 (831)
Q Consensus 651 ~w~~~~~~~~~~w~~~v~~il~~~~e~--------~~gs~ie~k~------~---~----------------------l~ 691 (831)
.+...++ .+.+.++++...+. ..+.+..... . . ..
T Consensus 80 ~~~~~~~------~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (288)
T 1nrw_A 80 YHHETID------KKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQSG 153 (288)
T ss_dssp EEECCCC------HHHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCC
T ss_pred EEEeeCC------HHHHHHHHHHHHHCCcEEEEEeCCEEEEcCchHHHHHHHHHHHhhcccccchHHHHhhhhhhhhcCC
Confidence 2332221 24556666554331 1122221100 0 0 00
Q ss_pred Eee----ccCC---C--c------c-c-hHHHHHHHHHHHhHhcCCCeEE-EEcCeEEEEEeCCCCHHHHHHHHHHHhhh
Q 044635 692 WSY----EDAD---P--D------F-G-SCQAKELLDHLESVLANEPVTV-KSGQNLVEVKPQGVNKGLVAKRLLSTMQE 753 (831)
Q Consensus 692 ~~~----~~~d---~--~------~-~-~~~a~el~~~L~~~l~~~~v~v-~~g~~~vEV~p~gvnKG~al~~Ll~~l~~ 753 (831)
+.+ .+.. . . + . ....+++.+.+++ + ..+.+ .++..++||+|++++||.|++++++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~~l~~-~--~~~~~~~s~~~~lei~~~~~~K~~~~~~~~~~~-- 228 (288)
T 1nrw_A 154 FAYINSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRYEH-A--EDLTLVSSAEHNFELSSRKASKGQALKRLAKQL-- 228 (288)
T ss_dssp EEECSCGGGGTSSSSCCCEEEEEEECSCHHHHHHHHHHHTT-C--TTEEEECSSTTEEEEEETTCSHHHHHHHHHHHT--
T ss_pred ceEcCCHHHhhccccCCCceEEEEEcCCHHHHHHHHHHHhh-C--CCEEEEeeCCCcEEEecCCCChHHHHHHHHHHh--
Confidence 111 1100 0 0 0 0 1223333344433 1 22443 457789999999999999999999998
Q ss_pred cCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEeC--ChhHHHHHHHHH
Q 044635 754 REMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLD--DTVEIVRLMQGL 821 (831)
Q Consensus 754 ~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~--d~~eV~~~L~~L 821 (831)
|++++++++|||+.||++|++.++ ++|+||++ +..|+|++. +.++|+++|+++
T Consensus 229 -~~~~~~~~~~GD~~nD~~m~~~ag--------------~~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~~~ 287 (288)
T 1nrw_A 229 -NIPLEETAAVGDSLNDKSMLEAAG--------------KGVAMGNAREDIKSIADAVTLTNDEHGVAHMMKHL 287 (288)
T ss_dssp -TCCGGGEEEEESSGGGHHHHHHSS--------------EEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHT
T ss_pred -CCCHHHEEEEcCCHHHHHHHHHcC--------------cEEEEcCCCHHHHhhCceeecCCCcChHHHHHHHh
Confidence 999999999999999999999997 46788876 346889886 468899999875
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-22 Score=209.91 Aligned_cols=213 Identities=15% Similarity=0.147 Sum_probs=148.2
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCCCc
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRRDE 650 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~~~ 650 (831)
.+|+|++|+||||++ .++.+++++.++|++|.+ .|+.|+++|||+...+..++..+. ..++|++||+.++..++
T Consensus 4 m~kli~~DlDGTLl~---~~~~i~~~~~~~l~~l~~-~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~- 78 (227)
T 1l6r_A 4 MIRLAAIDVDGNLTD---RDRLISTKAIESIRSAEK-KGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDG- 78 (227)
T ss_dssp CCCEEEEEHHHHSBC---TTSCBCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTS-
T ss_pred ceEEEEEECCCCCcC---CCCcCCHHHHHHHHHHHH-CCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCC-
Confidence 368999999999999 677899999999999976 699999999999999998887653 23699999999987433
Q ss_pred eEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCc--cchHHHHHHHHHHHhHhcCCCeEEEEcC
Q 044635 651 EWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPD--FGSCQAKELLDHLESVLANEPVTVKSGQ 728 (831)
Q Consensus 651 ~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~--~~~~~a~el~~~L~~~l~~~~v~v~~g~ 728 (831)
.+.... ... +.+.++ +...+ .+ ..+.. ...+++..+.. ...... +....+.+.+ .+.+.++.
T Consensus 79 ~~i~~~----~~l-~~~~~i-~~~~~----~~-~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~ 142 (227)
T 1l6r_A 79 SIKKFF----SNE-GTNKFL-EEMSK----RT-SMRSI-LTNRWREASTGFDIDPEDV-DYVRKEAESR---GFVIFYSG 142 (227)
T ss_dssp CEEESS----CSH-HHHHHH-HHHTT----TS-SCBCC-GGGGGCSSSEEEBCCGGGH-HHHHHHHHTT---TEEEEEET
T ss_pred CEEEEe----ccH-HHHHHH-HHHHH----Hh-cCCcc-ccccceecccceEEecCCH-HHHHHHHHhc---CEEEEecC
Confidence 222011 111 445555 43332 11 11000 00000000000 000011 1222232223 45555889
Q ss_pred eEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----Cccc
Q 044635 729 NLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKA 804 (831)
Q Consensus 729 ~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A 804 (831)
.++||+|++++||.+++++++++ |++++++++|||+.||++||+.++ ++|+||+. +..|
T Consensus 143 ~~~ei~~~~~~K~~~l~~l~~~~---~~~~~~~~~iGD~~nD~~m~~~ag--------------~~va~~n~~~~~k~~a 205 (227)
T 1l6r_A 143 YSWHLMNRGEDKAFAVNKLKEMY---SLEYDEILVIGDSNNDMPMFQLPV--------------RKACPANATDNIKAVS 205 (227)
T ss_dssp TEEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEECCSGGGHHHHTSSS--------------EEEECTTSCHHHHHHC
T ss_pred cEEEEecCCCCHHHHHHHHHHHh---CcCHHHEEEECCcHHhHHHHHHcC--------------ceEEecCchHHHHHhC
Confidence 99999999999999999999998 899999999999999999999987 46888876 3578
Q ss_pred ceEeC--ChhHHHHHHHHHH
Q 044635 805 KYYLD--DTVEIVRLMQGLA 822 (831)
Q Consensus 805 ~y~l~--d~~eV~~~L~~L~ 822 (831)
+|++. +.++|.++|+++.
T Consensus 206 ~~v~~~~~~~Gv~~~l~~~~ 225 (227)
T 1l6r_A 206 DFVSDYSYGEEIGQIFKHFE 225 (227)
T ss_dssp SEECSCCTTHHHHHHHHHTT
T ss_pred CEEecCCCCcHHHHHHHHHh
Confidence 89885 4688999998764
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=5.4e-21 Score=215.68 Aligned_cols=310 Identities=16% Similarity=0.173 Sum_probs=225.8
Q ss_pred HHHHHHHHHHHHHHHHHHc--CCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCCh---HHhhcCCCh------
Q 044635 180 WQAYVSVNKIFADRIMEVI--NPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSS---EIYKTLPIR------ 248 (831)
Q Consensus 180 w~~Y~~vN~~fa~~i~~~~--~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~---e~f~~lp~r------ 248 (831)
+..+..+.+.....+...+ ..+.|+|++|+++..+++.++++ ..++|+.+.+|..++.. ..+..-..+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~-~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 177 (439)
T 3fro_A 99 IRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKK-YFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYP 177 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHH-HHCCCEEEEESCCCCCCEEHHHHHHTTCGGGCCSS
T ss_pred hhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhh-ccCCCEEEEecccccccCchHHhCccccccccccc
Confidence 4445555555555554442 12248999999999888888874 45799999999987641 222111111
Q ss_pred --HHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHH
Q 044635 249 --EEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAK 326 (831)
Q Consensus 249 --~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~ 326 (831)
......+-.+|.|.+.+..+++.... .++. ...++.++|+|||.+.|.+....+.....
T Consensus 178 ~~~~~~~~~~~ad~ii~~S~~~~~~~~~----~~~~---------------~~~~i~vi~ngvd~~~~~~~~~~~~~~~~ 238 (439)
T 3fro_A 178 DIDPEHTGGYIADIVTTVSRGYLIDEWG----FFRN---------------FEGKITYVFNGIDCSFWNESYLTGSRDER 238 (439)
T ss_dssp EECHHHHHHHHCSEEEESCHHHHHHTHH----HHGG---------------GTTSEEECCCCCCTTTSCGGGSCSCHHHH
T ss_pred eeeHhhhhhhhccEEEecCHHHHHHHhh----hhhh---------------cCCceeecCCCCCchhcCcccccchhhhh
Confidence 33344555699999999888776332 1111 11256789999999988755433334556
Q ss_pred HHHHHHHhc-cCCcEEEEeccCcc-cccCHHHHHHHHHHHHHhC--CCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHH
Q 044635 327 VSELIKQFH-DQGKVMLLGVDDMD-IFKGISLKLLAMEQLLIQH--PEWQGKVVLVQIANPARGRGKDVKEVQAETYSTV 402 (831)
Q Consensus 327 ~~~lr~~~~-~~~~~iil~VdRld-~~KGi~~~l~A~~~lL~~~--P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv 402 (831)
...++++++ +.+ ++|+++||+. +.||++.+++|++++.+++ |+++ |+++|. ++ .++.+++++++
T Consensus 239 ~~~~~~~~~~~~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~----l~i~G~-----g~--~~~~~~l~~~~ 306 (439)
T 3fro_A 239 KKSLLSKFGMDEG-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMR----FIIIGK-----GD--PELEGWARSLE 306 (439)
T ss_dssp HHHHHHHHTCCSC-EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEE----EEEECC-----CC--HHHHHHHHHHH
T ss_pred HHHHHHHcCCCCC-cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeE----EEEEcC-----CC--hhHHHHHHHHH
Confidence 778889988 455 9999999999 9999999999999998766 6554 988883 22 23445666666
Q ss_pred HHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCCC---CCC-CCceEEEeccccccccc--CCCcee
Q 044635 403 ERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEP---SSP-KKSMLVVSEFIGCSPSL--SGAIRV 476 (831)
Q Consensus 403 ~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~---~~~-~~g~lVlSe~~G~~~~l--~~allV 476 (831)
.+.+ .++++.+.++.+++..+|+.||++|+||..||+.. ++. .+.|+|+|...|..+.+ .+|+++
T Consensus 307 ~~~~---------~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~~g~~~ 377 (439)
T 3fro_A 307 EKHG---------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNETGILV 377 (439)
T ss_dssp HHCT---------TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTCEEEEESSTHHHHHCCTTTCEEE
T ss_pred hhcC---------CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCCCcceeEEcCceEEe
Confidence 5532 36778888999999999999999999999999821 111 15688888887777776 468999
Q ss_pred CCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHH
Q 044635 477 NPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTC 530 (831)
Q Consensus 477 nP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 530 (831)
+|.|++++|++|.++++++++.+....++.++++.++++..+++++++-++++.
T Consensus 378 ~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 431 (439)
T 3fro_A 378 KAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSI 431 (439)
T ss_dssp CTTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCS
T ss_pred CCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH
Confidence 999999999999999996666667777778888888999999998888777643
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-21 Score=203.45 Aligned_cols=213 Identities=15% Similarity=0.148 Sum_probs=151.0
Q ss_pred ceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCCCce
Q 044635 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRRDEE 651 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~~~~ 651 (831)
+|+|++|+||||++ ..+.+++++.++|++|.+ .|+.|+++|||+...+.+++..+. ...+|++||+.++..+...
T Consensus 3 ~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~-~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~ 78 (231)
T 1wr8_A 3 IKAISIDIDGTITY---PNRMIHEKALEAIRRAES-LGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRI 78 (231)
T ss_dssp CCEEEEESTTTTBC---TTSCBCHHHHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEE
T ss_pred eeEEEEECCCCCCC---CCCcCCHHHHHHHHHHHH-CCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEE
Confidence 68999999999999 678899999999999976 699999999999999888776542 3458999999988733222
Q ss_pred EEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeec-cc---eEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEEEEc
Q 044635 652 WETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDK-ET---ALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSG 727 (831)
Q Consensus 652 w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k-~~---~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g 727 (831)
|... . +.+.++++.+.+..||..+... .. .+.+. .+......++++.+ .+.. .+.+.++
T Consensus 79 ~~~~---l-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~----~~~~-~~~~~~~ 141 (231)
T 1wr8_A 79 FLAS---M-----DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIM----RETINVETVREIIN----ELNL-NLVAVDS 141 (231)
T ss_dssp ESCC---C-----SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEEC----TTTSCHHHHHHHHH----HTTC-SCEEEEC
T ss_pred Eecc---H-----HHHHHHHHHHHHhCCCceEEecCCCceeeEEEE----CCCCCHHHHHHHHH----hcCC-cEEEEec
Confidence 2211 1 3345555555423444332110 00 01111 11111112223322 2332 2444488
Q ss_pred CeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----Ccc
Q 044635 728 QNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSK 803 (831)
Q Consensus 728 ~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~ 803 (831)
..++|+.|++++|+.+++++++++ |++++++++|||+.||++|++.++ ++|+||+. +..
T Consensus 142 ~~~~ei~~~~~~K~~~~~~~~~~~---~~~~~~~~~iGD~~nD~~~~~~ag--------------~~v~~~~~~~~~~~~ 204 (231)
T 1wr8_A 142 GFAIHVKKPWINKGSGIEKASEFL---GIKPKEVAHVGDGENDLDAFKVVG--------------YKVAVAQAPKILKEN 204 (231)
T ss_dssp SSCEEEECTTCCHHHHHHHHHHHH---TSCGGGEEEEECSGGGHHHHHHSS--------------EEEECTTSCHHHHTT
T ss_pred CcEEEEecCCCChHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHcC--------------CeEEecCCCHHHHhh
Confidence 899999999999999999999998 999999999999999999999997 45778875 357
Q ss_pred cceEeCC--hhHHHHHHHHHHh
Q 044635 804 AKYYLDD--TVEIVRLMQGLAC 823 (831)
Q Consensus 804 A~y~l~d--~~eV~~~L~~L~~ 823 (831)
|+|++++ .++|+++|+++..
T Consensus 205 a~~v~~~~~e~Gv~~~l~~~~~ 226 (231)
T 1wr8_A 205 ADYVTKKEYGEGGAEAIYHILE 226 (231)
T ss_dssp CSEECSSCHHHHHHHHHHHHHH
T ss_pred CCEEecCCCcchHHHHHHHHHH
Confidence 8999865 5679999998764
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.88 E-value=4.6e-22 Score=210.45 Aligned_cols=218 Identities=15% Similarity=0.236 Sum_probs=146.4
Q ss_pred eeEEecCCCccCCCCCCCCC-CCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC----CceEEecCCEEEEeCC
Q 044635 574 RAILLDYDGTLMPQASIDKS-PNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE----NLGIAAEHGYFFRLRR 648 (831)
Q Consensus 574 rli~~D~DGTLl~~~~~~~~-~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~----~~~liaenGa~i~~~~ 648 (831)
|+|++|+||||++ .++. ++++++++|++|.+ .|+.|+++|||+ ..+..++..+. ..++|++||+.++..+
T Consensus 3 kli~~DlDGTLl~---~~~~~i~~~~~~al~~l~~-~G~~~~iaTGR~-~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~ 77 (261)
T 2rbk_A 3 KALFFDIDGTLVS---FETHRIPSSTIEALEAAHA-KGLKIFIATGRP-KAIINNLSELQDRNLIDGYITMNGAYCFVGE 77 (261)
T ss_dssp CEEEECSBTTTBC---TTTSSCCHHHHHHHHHHHH-TTCEEEEECSSC-GGGCCSCHHHHHTTCCCEEEEGGGTEEEETT
T ss_pred cEEEEeCCCCCcC---CCCCcCCHHHHHHHHHHHH-CCCEEEEECCCh-HHHHHHHHHhCcccccCeEEEeCCEEEEECC
Confidence 8999999999999 6666 99999999999987 599999999999 87766654432 3468999999998743
Q ss_pred CceEEEcCCcCCccHHHHHHHHHHHHhcc-C-------CCeeEeeccceEE-EeeccC---------------CCccc--
Q 044635 649 DEEWETCIPVADCGWKQIAEPVMKLYTET-T-------DGSTIEDKETALV-WSYEDA---------------DPDFG-- 702 (831)
Q Consensus 649 ~~~w~~~~~~~~~~w~~~v~~il~~~~e~-~-------~gs~ie~k~~~l~-~~~~~~---------------d~~~~-- 702 (831)
...+...+ + .+.+.++++...+. . .+.|.+.....+. .+++.. ++-+.
T Consensus 78 ~~i~~~~l---~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 151 (261)
T 2rbk_A 78 EVIYKSAI---P---QEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMT 151 (261)
T ss_dssp EEEEECCC---C---HHHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEE
T ss_pred EEEEecCC---C---HHHHHHHHHHHHHcCCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCCCccccchhccCceeEEE
Confidence 32333322 2 23445555444321 1 1222221100000 111100 00000
Q ss_pred hHHHHHHHHHHHhHhcCCCeEE-EEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhc
Q 044635 703 SCQAKELLDHLESVLANEPVTV-KSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSM 781 (831)
Q Consensus 703 ~~~a~el~~~L~~~l~~~~v~v-~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~ 781 (831)
.....+....+.+.+.+ +.+ .++..++||+|++++||.+++++++++ |++++++++|||+.||++|++.++
T Consensus 152 ~~~~~~~~~~~~~~~~~--~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~---~~~~~~~~~iGD~~nD~~~~~~ag--- 223 (261)
T 2rbk_A 152 PFITEEEEKEVLPSIPT--CEIGRWYPAFADVTAKGDTKQKGIDEIIRHF---GIKLEETMSFGDGGNDISMLRHAA--- 223 (261)
T ss_dssp ECCCHHHHHHHGGGSTT--CEEECSSTTCCEEESTTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSS---
T ss_pred EEeCHHHHHHHHHhcCC--eEEEEecCCeEEecCCCCChHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHcC---
Confidence 00001111223333333 333 356789999999999999999999998 999999999999999999999997
Q ss_pred CCCCCCCCCceEEEEeCCC----CcccceEeCChhH--HHHHHHHH
Q 044635 782 AGPSIAPRAEVFACTVGRK----PSKAKYYLDDTVE--IVRLMQGL 821 (831)
Q Consensus 782 ~~~~~~~~~~~~~v~vG~~----~s~A~y~l~d~~e--V~~~L~~L 821 (831)
++|++|+. +..|+|++++.++ |.++|+++
T Consensus 224 -----------~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~~~ 258 (261)
T 2rbk_A 224 -----------IGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKHF 258 (261)
T ss_dssp -----------EEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHHH
T ss_pred -----------ceEEecCccHHHHhhCCEEeccCchhhHHHHHHHh
Confidence 46788876 3679999987766 99999876
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=99.86 E-value=9.6e-22 Score=206.90 Aligned_cols=200 Identities=20% Similarity=0.116 Sum_probs=130.9
Q ss_pred ceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCC-CceEEecCCEEEEeCCC--
Q 044635 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE-NLGIAAEHGYFFRLRRD-- 649 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~-~~~liaenGa~i~~~~~-- 649 (831)
+|+|++|+||||+ . +..+++ ++++|++|.+ .|+.|+|+|||+...+..++..+. ..++|++||+.|+..++
T Consensus 2 ikli~~DlDGTLl-~---~~~~~~-~~~~l~~l~~-~g~~~~i~Tgr~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~ 75 (249)
T 2zos_A 2 IRLIFLDIDKTLI-P---GYEPDP-AKPIIEELKD-MGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGYF 75 (249)
T ss_dssp EEEEEECCSTTTC-T---TSCSGG-GHHHHHHHHH-TTEEEEEBCSSCHHHHHHHHHHHTCCSCEEETTTTEEECCTTCC
T ss_pred ccEEEEeCCCCcc-C---CCCcHH-HHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCccEEEeCCeEEEccCCcc
Confidence 5899999999999 3 234544 9999999976 699999999999999988887653 35899999999997642
Q ss_pred ----------ceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeE-e-------------e--------ccceEEEeeccC
Q 044635 650 ----------EEWETCIPVADCGWKQIAEPVMKLYTETTDGSTI-E-------------D--------KETALVWSYEDA 697 (831)
Q Consensus 650 ----------~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~i-e-------------~--------k~~~l~~~~~~~ 697 (831)
..+.... ..+ .+.+.++++.+.+..+-... + . +.......+. .
T Consensus 76 ~~~~~~~~~~~~~i~~~-~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 150 (249)
T 2zos_A 76 PFDVKGKEVGNYIVIEL-GIR---VEKIREELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAMEREYSETIFEW-S 150 (249)
T ss_dssp C------CCCCCCEEEC-SCC---HHHHHHHHHHHHHHHTCEEGGGSCHHHHHHHHCCCTTTHHHHHCCSSCEEEEEC-S
T ss_pred cccccccccCceEEEec-CCC---HHHHHHHHHHHHhhcCEEEecCCCHHHHHHHhCCChhHhhhhhhhhhcCceEec-C
Confidence 2222111 111 23344444433221000000 0 0 0000000000 0
Q ss_pred CCccchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCC-CcccEEEEcCCchhHHHHHH
Q 044635 698 DPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREM-LPDFVLCVGDDRSDEDMFEV 776 (831)
Q Consensus 698 d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~-~~d~vla~GD~~NDe~Mf~~ 776 (831)
+++ . .+.+.+ ..+.+..+..++||+| ++|||.|+++|++++ |+ +++++++|||+.||++||+.
T Consensus 151 ~~~-----~---~~~l~~----~~~~~~~s~~~~ei~~-g~sKg~al~~l~~~~---~~~~~~~viafGD~~NDi~Ml~~ 214 (249)
T 2zos_A 151 RDG-----W---EEVLVE----GGFKVTMGSRFYTVHG-NSDKGKAAKILLDFY---KRLGQIESYAVGDSYNDFPMFEV 214 (249)
T ss_dssp SSC-----H---HHHHHH----TTCEEEECSSSEEEEC-SCCHHHHHHHHHHHH---HTTSCEEEEEEECSGGGHHHHTT
T ss_pred CHH-----H---HHHHHh----CCEEEEecCCeEEEeC-CCChHHHHHHHHHHh---ccCCCceEEEECCCcccHHHHHh
Confidence 011 0 222332 2355566677899999 999999999999998 77 89999999999999999999
Q ss_pred cchhcCCCCCCCCCceEEEEeCCCC-----cccceEeCChhH
Q 044635 777 IISSMAGPSIAPRAEVFACTVGRKP-----SKAKYYLDDTVE 813 (831)
Q Consensus 777 a~~~~~~~~~~~~~~~~~v~vG~~~-----s~A~y~l~d~~e 813 (831)
++ ++|+||++. ..|+|+++++++
T Consensus 215 ag--------------~~va~gna~~~~~~~~a~~v~~~~~~ 242 (249)
T 2zos_A 215 VD--------------KVFIVGSLKHKKAQNVSSIIDVLEVI 242 (249)
T ss_dssp SS--------------EEEEESSCCCTTEEEESSHHHHHHHH
T ss_pred CC--------------cEEEeCCCCccccchhceEEeccccc
Confidence 97 578888864 246666654443
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.6e-21 Score=206.12 Aligned_cols=216 Identities=17% Similarity=0.158 Sum_probs=142.3
Q ss_pred eEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCc----
Q 044635 575 AILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDE---- 650 (831)
Q Consensus 575 li~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~---- 650 (831)
+|+||+||||++ .. .+++++.++|++|.+ +|+.|+++|||+...+. .++ + ..++|++||+.++.....
T Consensus 2 li~~DlDGTLl~---~~-~i~~~~~~al~~l~~-~Gi~v~iaTGR~~~~~~-~l~-~-~~~~i~~nGa~i~~~~~~~~~~ 73 (259)
T 3zx4_A 2 IVFTDLDGTLLD---ER-GELGPAREALERLRA-LGVPVVPVTAKTRKEVE-ALG-L-EPPFIVENGGGLYLPRDWPVRA 73 (259)
T ss_dssp EEEECCCCCCSC---SS-SSCSTTHHHHHHHHH-TTCCEEEBCSSCHHHHH-HTT-C-CSSEEEGGGTEEEEETTCSSCC
T ss_pred EEEEeCCCCCcC---CC-cCCHHHHHHHHHHHH-CCCeEEEEeCCCHHHHH-HcC-C-CCcEEEECCcEEEeCCCCcccc
Confidence 799999999999 56 889999999999976 69999999999999998 443 2 467999999999887653
Q ss_pred ------eEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEe-ecc--------ceEEEeec--cCCCcc------chHHHH
Q 044635 651 ------EWETCIPVADCGWKQIAEPVMKLYTETTDGSTIE-DKE--------TALVWSYE--DADPDF------GSCQAK 707 (831)
Q Consensus 651 ------~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie-~k~--------~~l~~~~~--~~d~~~------~~~~a~ 707 (831)
.+.... ..+ .+.+.++++.+.+..+-.+.. ... ..+..... .....+ ......
T Consensus 74 ~~~~~~~~~~~~-~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (259)
T 3zx4_A 74 GRPKGGYRVVSL-AWP---YRKVRARLREAEALAGRPILGYGDLTAEAVARLTGLSREAARRAKAREYDETLVLCPEEVE 149 (259)
T ss_dssp SEEETTEEEEEC-SCC---HHHHHHHHHHHHHHHTSCCCBGGGBCHHHHHHHHCCCHHHHHHHTCCSSCEEBCCCTTTHH
T ss_pred cccCCceEEEEc-CCC---HHHHHHHHHHHHHhcCceEEEcCCCCHHHHHHHcCCCHHHhhhhhccccceeEEeCcHHHH
Confidence 122111 111 233444444332210000000 000 00000000 000000 000123
Q ss_pred HHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCc--ccEEEEcCCchhHHHHHHcchhcCCCC
Q 044635 708 ELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLP--DFVLCVGDDRSDEDMFEVIISSMAGPS 785 (831)
Q Consensus 708 el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~--d~vla~GD~~NDe~Mf~~a~~~~~~~~ 785 (831)
++.+.+.+ ..+.+..+..++||+|+ ++||.|++++++++ |+++ +++++|||+.||++||+.++
T Consensus 150 ~~~~~l~~----~~~~~~~s~~~~ei~~~-~~K~~~l~~l~~~~---~i~~~~~~~~~~GD~~nD~~m~~~ag------- 214 (259)
T 3zx4_A 150 AVLEALEA----VGLEWTHGGRFYHAAKG-ADKGRAVARLRALW---PDPEEARFAVGLGDSLNDLPLFRAVD------- 214 (259)
T ss_dssp HHHHHHHH----TTCEEEECSSSEEEESS-CCHHHHHHHHHHTC---SSHHHHTSEEEEESSGGGHHHHHTSS-------
T ss_pred HHHHHHHH----CCcEEEecCceEEEcCC-CCHHHHHHHHHHHh---CCCCCCceEEEEeCCHHHHHHHHhCC-------
Confidence 44444443 24566666677899999 99999999999998 8988 99999999999999999998
Q ss_pred CCCCCceEEEEeCCCC-cccceEe--CChhHHHHHHHHHHhh
Q 044635 786 IAPRAEVFACTVGRKP-SKAKYYL--DDTVEIVRLMQGLACV 824 (831)
Q Consensus 786 ~~~~~~~~~v~vG~~~-s~A~y~l--~d~~eV~~~L~~L~~~ 824 (831)
++|+|||+. -+|.|++ ++.++|.++|+.+...
T Consensus 215 -------~~va~~na~~~~~~~~~~~~~~~gv~~~~~~~~~~ 249 (259)
T 3zx4_A 215 -------LAVYVGRGDPPEGVLATPAPGPEGFRYAVERYLLP 249 (259)
T ss_dssp -------EEEECSSSCCCTTCEECSSCHHHHHHHHHHHHTTT
T ss_pred -------CeEEeCChhhcCCcEEeCCCCchHHHHHHHHHHHh
Confidence 467777652 3555665 3578899999998754
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.5e-19 Score=204.63 Aligned_cols=291 Identities=13% Similarity=0.139 Sum_probs=199.8
Q ss_pred CCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcC-----C-ChHHH-HHHHhcCCeEeecCHHhHHHHHH
Q 044635 202 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTL-----P-IREEI-LRALLNSDLIGFHTFDYARHFLS 274 (831)
Q Consensus 202 ~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~l-----p-~r~ei-l~~ll~~dligf~t~~~~~~Fl~ 274 (831)
-|+|++|++...+++.++.+. .++|+.+.+|..++........ + .+..+ ...+-.+|.|.+.+....+.+.+
T Consensus 123 ~Div~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 201 (438)
T 3c48_A 123 YDLIHSHYWLSGQVGWLLRDL-WRIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMH 201 (438)
T ss_dssp CSEEEEEHHHHHHHHHHHHHH-HTCCEEEECSSCHHHHSCC----CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHHH
T ss_pred CCEEEeCCccHHHHHHHHHHH-cCCCEEEEecCCcccccccccccCCcchHHHHHHHHHHHhcCCEEEEcCHHHHHHHHH
Confidence 389999987665555555443 3789999999875421100000 0 01111 12334589999998877766653
Q ss_pred HHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccccC
Q 044635 275 CCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIFKG 353 (831)
Q Consensus 275 ~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~KG 353 (831)
. +|.. ..++.++|+|||...|... .......++++++ +.++++|+++||+.+.||
T Consensus 202 ~----~g~~---------------~~k~~vi~ngvd~~~~~~~-----~~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg 257 (438)
T 3c48_A 202 H----YDAD---------------PDRISVVSPGADVELYSPG-----NDRATERSRRELGIPLHTKVVAFVGRLQPFKG 257 (438)
T ss_dssp H----HCCC---------------GGGEEECCCCCCTTTSCCC---------CHHHHHHTTCCSSSEEEEEESCBSGGGC
T ss_pred H----hCCC---------------hhheEEecCCccccccCCc-----ccchhhhhHHhcCCCCCCcEEEEEeeecccCC
Confidence 2 2321 1246789999998877422 1122234777887 568899999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHH
Q 044635 354 ISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYY 433 (831)
Q Consensus 354 i~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly 433 (831)
+..+++|+..+.+++|+. ++.|+++|.+.. .++. .+++++++.+.+ ..+.+.+.+.++.+++..+|
T Consensus 258 ~~~li~a~~~l~~~~p~~--~~~l~i~G~~~~-~g~~----~~~l~~~~~~~~-------l~~~v~~~g~~~~~~~~~~~ 323 (438)
T 3c48_A 258 PQVLIKAVAALFDRDPDR--NLRVIICGGPSG-PNAT----PDTYRHMAEELG-------VEKRIRFLDPRPPSELVAVY 323 (438)
T ss_dssp HHHHHHHHHHHHHHCTTC--SEEEEEECCBC-----------CHHHHHHHHTT-------CTTTEEEECCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCc--ceEEEEEeCCCC-CCcH----HHHHHHHHHHcC-------CCCcEEEcCCCChHHHHHHH
Confidence 999999999999998842 356888885321 1222 344555555432 22223456789999999999
Q ss_pred HHcCEeEECCCccCCCC---CCC-CCceEEEecccccccccC---CCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 044635 434 VVAECCLVTAVRDGSEP---SSP-KKSMLVVSEFIGCSPSLS---GAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKH 506 (831)
Q Consensus 434 ~~ADv~vvtS~~eGma~---~~~-~~g~lVlSe~~G~~~~l~---~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~ 506 (831)
+.||++|+||..||+.. ++. .+.|+|+|...|..+.+. +|++++|.|++++|++|.++++. ++.+....++.
T Consensus 324 ~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~~ 402 (438)
T 3c48_A 324 RAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDD-DETRIRMGEDA 402 (438)
T ss_dssp HHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHHHHHHHC-HHHHHHHHHHH
T ss_pred HhCCEEEECccccCCchHHHHHHHcCCCEEecCCCChhHHhhCCCcEEECCCCCHHHHHHHHHHHHcC-HHHHHHHHHHH
Confidence 99999999999999821 111 156888888877777773 48999999999999999999984 45555556677
Q ss_pred hhhhccCCHHHHHHHHHHHHHHHHHH
Q 044635 507 YRYVSTHDVGYWARSFLQDLERTCRE 532 (831)
Q Consensus 507 ~~~v~~~~~~~W~~~~l~~l~~~~~~ 532 (831)
++++.++++...++++++-++++...
T Consensus 403 ~~~~~~~s~~~~~~~~~~~~~~~~~~ 428 (438)
T 3c48_A 403 VEHARTFSWAATAAQLSSLYNDAIAN 428 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHhhh
Confidence 88887799999999998888877654
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=5.5e-19 Score=196.49 Aligned_cols=282 Identities=15% Similarity=0.135 Sum_probs=198.9
Q ss_pred HHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHH-HHHHhcCCeEeecCHHhHHHHHH
Q 044635 196 EVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEI-LRALLNSDLIGFHTFDYARHFLS 274 (831)
Q Consensus 196 ~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~ei-l~~ll~~dligf~t~~~~~~Fl~ 274 (831)
+..++ |+|++|+...+.+...+.++....++.+.+|...+ .+...+....+ -..+-.+|.|-+.+....+.+..
T Consensus 83 ~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~---~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 157 (394)
T 3okp_A 83 REREI--DNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEV---GWSMLPGSRQSLRKIGTEVDVLTYISQYTLRRFKS 157 (394)
T ss_dssp HHTTC--SEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHH---HHTTSHHHHHHHHHHHHHCSEEEESCHHHHHHHHH
T ss_pred HhcCC--CEEEECCcchHHHHHHHHHhcCCCcEEEEeccchh---hhhhcchhhHHHHHHHHhCCEEEEcCHHHHHHHHH
Confidence 44455 89999987766544444344433468889995422 12222222222 33345689999999877766654
Q ss_pred HHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccccC
Q 044635 275 CCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIFKG 353 (831)
Q Consensus 275 ~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~KG 353 (831)
.. +. ..++.++|+|||.+.|.+ ........++++++ +.++++|+++||+++.||
T Consensus 158 ~~----~~----------------~~~~~vi~ngv~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg 212 (394)
T 3okp_A 158 AF----GS----------------HPTFEHLPSGVDVKRFTP-----ATPEDKSATRKKLGFTDTTPVIACNSRLVPRKG 212 (394)
T ss_dssp HH----CS----------------SSEEEECCCCBCTTTSCC-----CCHHHHHHHHHHTTCCTTCCEEEEESCSCGGGC
T ss_pred hc----CC----------------CCCeEEecCCcCHHHcCC-----CCchhhHHHHHhcCCCcCceEEEEEeccccccC
Confidence 21 11 126788999999987642 12234567888887 666799999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHH
Q 044635 354 ISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYY 433 (831)
Q Consensus 354 i~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly 433 (831)
+..+++|++++.+++|+++ |+++|. ++..+.+ ++++..++ ..|+ +.|.++.+++..+|
T Consensus 213 ~~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~l----~~~~~~~~--------~~v~-~~g~~~~~~~~~~~ 270 (394)
T 3okp_A 213 QDSLIKAMPQVIAARPDAQ----LLIVGS-----GRYESTL----RRLATDVS--------QNVK-FLGRLEYQDMINTL 270 (394)
T ss_dssp HHHHHHHHHHHHHHSTTCE----EEEECC-----CTTHHHH----HHHTGGGG--------GGEE-EEESCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCeE----EEEEcC-----chHHHHH----HHHHhccc--------CeEE-EcCCCCHHHHHHHH
Confidence 9999999999999999876 888883 3433333 33332211 1244 46689999999999
Q ss_pred HHcCEeEECCCc-------cCCCC---CC-CCCceEEEecccccccccC--CCceeCCCCHHHHHHHHHHHhcCCHHHHH
Q 044635 434 VVAECCLVTAVR-------DGSEP---SS-PKKSMLVVSEFIGCSPSLS--GAIRVNPWNIDAVSDAMDSALEMADQEKQ 500 (831)
Q Consensus 434 ~~ADv~vvtS~~-------eGma~---~~-~~~g~lVlSe~~G~~~~l~--~allVnP~d~~~~A~ai~~aL~m~~~er~ 500 (831)
+.||++|+||.. ||+.. ++ ..+.|+|+|...|..+.+. +|++++|.|++++|++|.++++ .++.+.
T Consensus 271 ~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~~g~~~~~~d~~~l~~~i~~l~~-~~~~~~ 349 (394)
T 3okp_A 271 AAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPATGLVVEGSDVDKLSELLIELLD-DPIRRA 349 (394)
T ss_dssp HHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCTTTEEECCTTCHHHHHHHHHHHHT-CHHHHH
T ss_pred HhCCEEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCChHHHHhcCCceEeCCCCHHHHHHHHHHHHh-CHHHHH
Confidence 999999999999 98821 11 1256888888877777763 6899999999999999999998 455566
Q ss_pred HHHHHHhhhhcc-CCHHHHHHHHHHHHHHHH
Q 044635 501 LRHEKHYRYVST-HDVGYWARSFLQDLERTC 530 (831)
Q Consensus 501 ~r~~~~~~~v~~-~~~~~W~~~~l~~l~~~~ 530 (831)
...++.++++.+ +++..+++++++-+++..
T Consensus 350 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 380 (394)
T 3okp_A 350 AMGAAGRAHVEAEWSWEIMGERLTNILQSEP 380 (394)
T ss_dssp HHHHHHHHHHHHHTBHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHhc
Confidence 666677777765 899999999888877643
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=6e-19 Score=205.65 Aligned_cols=291 Identities=13% Similarity=0.104 Sum_probs=188.8
Q ss_pred CCEEEEeCccccchHHHHHhhc------CCCeEEEEEeccC-----CChHHhh-cCCC--------------------hH
Q 044635 202 DDFVWVHDYHLMVLPTFLRKRF------NRVKLGFFLHSPF-----PSSEIYK-TLPI--------------------RE 249 (831)
Q Consensus 202 ~d~vwvhDyhL~llp~~lr~~~------~~~~i~~flH~Pf-----P~~e~f~-~lp~--------------------r~ 249 (831)
+|++.+||||-.++|.+++... .++++.|+.|-.- |....-. .+|. -.
T Consensus 154 ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 233 (536)
T 3vue_A 154 DVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKIN 233 (536)
T ss_dssp CEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEEE
T ss_pred CEEEEECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccchh
Confidence 4788899999999999998765 3689999999642 1111100 0111 02
Q ss_pred HHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCC--------c
Q 044635 250 EILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSL--------P 321 (831)
Q Consensus 250 eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~--------~ 321 (831)
-+-.++..||.|..-++.|++..++.-. .|.. ++...+..+|.++|+|||.+.|.+.... .
T Consensus 234 ~~k~~i~~ad~v~tVS~~~a~ei~~~~~--~g~~---------l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~ 302 (536)
T 3vue_A 234 WMKAGILEADRVLTVSPYYAEELISGIA--RGCE---------LDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDAT 302 (536)
T ss_dssp HHHHHHHHCSEEEESCHHHHHHHHTTCC--CCSS---------SCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTT
T ss_pred HHHHHHHhccEEEEcCHHHhhhhhcccc--cccc---------cccccccCCeEEEECCcchhhcCCCCccccccccchh
Confidence 3566888899999999999887654110 0110 1112344578899999999988643211 0
Q ss_pred c----hHHHHHHHHHHhc---cCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHH
Q 044635 322 G----TEAKVSELIKQFH---DQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEV 394 (831)
Q Consensus 322 ~----~~~~~~~lr~~~~---~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l 394 (831)
. -......+++++| .++.++|++|||+++.||++.+++|+.+++++++ + |+++|.. +. +.
T Consensus 303 ~~~~~K~~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~--~----l~l~G~G---~~----~~ 369 (536)
T 3vue_A 303 TAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDV--Q----IVLLGTG---KK----KF 369 (536)
T ss_dssp THHHHHHHHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSC--E----EEEECCB---CH----HH
T ss_pred hhhhhhHHHHHHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhhCC--e----EEEEecc---Cc----hH
Confidence 0 1122355667776 2467899999999999999999999999976543 2 6666632 21 22
Q ss_pred HHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCCC---CCCC-CceEEEeccccccccc
Q 044635 395 QAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSL 470 (831)
Q Consensus 395 ~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l 470 (831)
...+..++...+. .+.+ .+..+.+++..+|+.||+||+||.+|||.. +++. +.|+|+|...|..+.+
T Consensus 370 ~~~~~~~~~~~~~--------~v~~-~~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V 440 (536)
T 3vue_A 370 EKLLKSMEEKYPG--------KVRA-VVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTV 440 (536)
T ss_dssp HHHHHHHHHHSTT--------TEEE-ECSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEEECSCTHHHHHC
T ss_pred HHHHHHHHhhcCC--------ceEE-EEeccHHHHHHHHHhhheeecccccCCCCHHHHHHHHcCCCEEEcCCCCchhee
Confidence 3334444433321 2444 446789999999999999999999999832 2222 5588888888888776
Q ss_pred C---C----------CceeCCCCHHHHHHHHHHHhcCCH-HHHHHHHHHHhhhhccCCHHHHHHHHHHHHH
Q 044635 471 S---G----------AIRVNPWNIDAVSDAMDSALEMAD-QEKQLRHEKHYRYVSTHDVGYWARSFLQDLE 527 (831)
Q Consensus 471 ~---~----------allVnP~d~~~~A~ai~~aL~m~~-~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 527 (831)
. + +++|+|.|++++|++|.++|..-. +++++..++. .-+.++|..-|+++++-+.
T Consensus 441 ~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~~~~~~~~~a--m~~~fSW~~~A~~y~~ly~ 509 (536)
T 3vue_A 441 IEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNC--MNQDLSWKGPAKNWENVLL 509 (536)
T ss_dssp CBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSHHHHHHHHHH--HHSCCSSHHHHHHHHHHHH
T ss_pred eCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhcCcHHHHHHHHHH--HHhcCCHHHHHHHHHHHHH
Confidence 3 2 358999999999999999986322 2222222221 1245777777776654443
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=6e-19 Score=198.63 Aligned_cols=297 Identities=18% Similarity=0.171 Sum_probs=197.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhc
Q 044635 178 SLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLN 257 (831)
Q Consensus 178 ~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~ 257 (831)
..|..|....+.+++.+ +..++ |+|++|+++...+..+++++ .|+.+.+|..++..... ....+.+.+..
T Consensus 106 ~~~~~~~~~~~~~~~~l-~~~~~--Dvv~~~~~~~~~~~~~~~~~---~p~v~~~h~~~~~~~~~----~~~~~~~~~~~ 175 (416)
T 2x6q_A 106 EMKELYLNVNRENSKFI-DLSSF--DYVLVHDPQPAALIEFYEKK---SPWLWRCHIDLSSPNRE----FWEFLRRFVEK 175 (416)
T ss_dssp HHHHHHHHHHHHHHHSS-CGGGS--SEEEEESSTTGGGGGGSCCC---SCEEEECCSCCSSCCHH----HHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHH-hhcCC--CEEEEeccchhhHHHHHHhc---CCEEEEEccccCCccHH----HHHHHHHHHHh
Confidence 34555555444444333 22344 89999999887766655432 78999999877642100 01122223334
Q ss_pred CCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-c
Q 044635 258 SDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-D 336 (831)
Q Consensus 258 ~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~ 336 (831)
+|.+-+.+.++.+..+ . ..++.++|+|||...+..... .......++++++ +
T Consensus 176 ~~~~i~~~s~~~~~~~----------------------~--~~~~~vi~ngvd~~~~~~~~~---~~~~~~~~r~~~~~~ 228 (416)
T 2x6q_A 176 YDRYIFHLPEYVQPEL----------------------D--RNKAVIMPPSIDPLSEKNVEL---KQTEILRILERFDVD 228 (416)
T ss_dssp SSEEEESSGGGSCTTS----------------------C--TTTEEECCCCBCTTSTTTSCC---CHHHHHHHHHHTTCC
T ss_pred CCEEEEechHHHHhhC----------------------C--ccceEEeCCCCChhhhccccc---ChhhHHHHHHHhCCC
Confidence 5665544443332110 0 024568999999876642211 2234567888887 5
Q ss_pred CCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCcc
Q 044635 337 QGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDP 416 (831)
Q Consensus 337 ~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~p 416 (831)
.++++|+++||+.+.||+..+++|+..+.+++|+++ |+++|.... ..+ +..+.+++++.+.+.. ..
T Consensus 229 ~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~----l~i~G~g~~-~~~---~~~~~l~~~~~~~~~~------~~ 294 (416)
T 2x6q_A 229 PEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQ----LLLVGVMAH-DDP---EGWIYFEKTLRKIGED------YD 294 (416)
T ss_dssp TTSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCE----EEEEECCCT-TCH---HHHHHHHHHHHHHTTC------TT
T ss_pred CCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeE----EEEEecCcc-cch---hHHHHHHHHHHHhCCC------Cc
Confidence 678999999999999999999999999999999876 888885431 112 2344555565554421 13
Q ss_pred EEEec--CCCCHHHHHHHHHHcCEeEECCCccCCCC---CCC-CCceEEEeccccccccc---CCCceeCCCCHHHHHHH
Q 044635 417 VVLID--EPLKFYERIAYYVVAECCLVTAVRDGSEP---SSP-KKSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDA 487 (831)
Q Consensus 417 v~~~~--~~v~~~el~aly~~ADv~vvtS~~eGma~---~~~-~~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~a 487 (831)
|.+.. ..++.+++..+|+.||++|+||..||+.. ++. .+.|+|+|...|..+.+ .+|++++ |++++|++
T Consensus 295 V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~~~g~~e~i~~~~~g~l~~--d~~~la~~ 372 (416)
T 2x6q_A 295 VKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRAVGGIKFQIVDGETGFLVR--DANEAVEV 372 (416)
T ss_dssp EEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTCCEEEESCHHHHHHCCBTTTEEEES--SHHHHHHH
T ss_pred EEEecccCCCCHHHHHHHHHhCCEEEECCCcCCCccHHHHHHHcCCCEEEccCCCChhheecCCCeEEEC--CHHHHHHH
Confidence 66543 25568899999999999999999999821 111 15688888887777777 3578887 99999999
Q ss_pred HHHHhcCCHHHHHHHHHHHhhhhc-cCCHHHHHHHHHHHHHH
Q 044635 488 MDSALEMADQEKQLRHEKHYRYVS-THDVGYWARSFLQDLER 528 (831)
Q Consensus 488 i~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l~~ 528 (831)
|.++++. ++.++...++.++++. .+++...++++++-+++
T Consensus 373 i~~ll~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 373 VLYLLKH-PEVSKEMGAKAKERVRKNFIITKHMERYLDILNS 413 (416)
T ss_dssp HHHHHHC-HHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHT
T ss_pred HHHHHhC-HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 9999984 4555555666777775 68988888888776653
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=99.81 E-value=4.9e-18 Score=195.29 Aligned_cols=297 Identities=17% Similarity=0.092 Sum_probs=197.8
Q ss_pred CCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCCh----HHhhc--CC-------------ChHHHHHHHhcCCeEe
Q 044635 202 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSS----EIYKT--LP-------------IREEILRALLNSDLIG 262 (831)
Q Consensus 202 ~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~----e~f~~--lp-------------~r~eil~~ll~~dlig 262 (831)
-|+|++|+++..+++.+++.+..++|+.+.+|..++.. ..+.. ++ ...-....+-.+|.|.
T Consensus 130 ~Divh~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi 209 (485)
T 2qzs_A 130 PDVVHAHDWHAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHIT 209 (485)
T ss_dssp CSEEEEETGGGTTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEE
T ss_pred CCEEEeeccchhHHHHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeEE
Confidence 48999999998888888764456899999999875421 11111 01 0112233445689999
Q ss_pred ecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEE--EEEEEeecccChHHHHHhhCC-----------cchHHHHHH
Q 044635 263 FHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRT--VSIKILPVGIHMGQLQSVLSL-----------PGTEAKVSE 329 (831)
Q Consensus 263 f~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~--~~i~v~P~GId~~~~~~~~~~-----------~~~~~~~~~ 329 (831)
..+....+.+... .+|..... . + .... .++.++|+|||.+.|.+.... +........
T Consensus 210 ~~S~~~~~~~~~~---~~~~~~~~---~--~--~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (485)
T 2qzs_A 210 AVSPTYAREITEP---QFAYGMEG---L--L--QQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQ 279 (485)
T ss_dssp ESSHHHHHHTTSH---HHHTTCHH---H--H--HHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHH
T ss_pred ecCHHHHHHHhcc---ccCcchHH---H--H--HhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHH
Confidence 8888766655321 01100000 0 0 0001 256789999999887543210 011123467
Q ss_pred HHHHhc-cC--CcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHh
Q 044635 330 LIKQFH-DQ--GKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERIN 406 (831)
Q Consensus 330 lr~~~~-~~--~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN 406 (831)
++++++ +. ++++|+++||+++.||+..+++|++++.+ ++ +.|+++|. ++ .++++++++++.+.+
T Consensus 280 ~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~----~~l~ivG~-----g~--~~~~~~l~~~~~~~~ 346 (485)
T 2qzs_A 280 LQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--QG----GQLALLGA-----GD--PVLQEGFLAAAAEYP 346 (485)
T ss_dssp HHHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--TT----CEEEEEEE-----EC--HHHHHHHHHHHHHST
T ss_pred HHHHcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh--CC----cEEEEEeC-----Cc--hHHHHHHHHHHHhCC
Confidence 788887 43 67899999999999999999999999876 34 44888884 22 134566666666532
Q ss_pred ccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCCC---CCCC-CceEEEecccccccccC-----------
Q 044635 407 QTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSLS----------- 471 (831)
Q Consensus 407 ~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l~----------- 471 (831)
..|+++.+. +.+++..+|+.||++|+||..|||.. +++. +.|+|+|...|..+.+.
T Consensus 347 --------~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~ 417 (485)
T 2qzs_A 347 --------GQVGVQIGY-HEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGV 417 (485)
T ss_dssp --------TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTC
T ss_pred --------CcEEEeCCC-CHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHCCCCEEECCCCCccceeccCccccccccc
Confidence 147667766 88888999999999999999999821 2222 45788888777777662
Q ss_pred -CCceeCCCCHHHHHHHHHHHhc--CCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHH
Q 044635 472 -GAIRVNPWNIDAVSDAMDSALE--MADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRE 532 (831)
Q Consensus 472 -~allVnP~d~~~~A~ai~~aL~--m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~ 532 (831)
+|++++|.|++++|++|.+++. ..++.+....++.++ ..+++...++++++-+++...+
T Consensus 418 ~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~ly~~~~~~ 479 (485)
T 2qzs_A 418 ASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMA--MDFSWQVAAKSYRELYYRLKLE 479 (485)
T ss_dssp CCBEEECSSSHHHHHHHHHHHHHHHTSHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHC--
T ss_pred cceEEECCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--hcCCHHHHHHHHHHHHHHhhhh
Confidence 5799999999999999999994 244444444444433 7889999999888877765443
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=4.8e-19 Score=204.66 Aligned_cols=301 Identities=13% Similarity=0.033 Sum_probs=201.9
Q ss_pred CEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHH------------hhcCC--ChHHH-HHHHhcCCeEeecCHH
Q 044635 203 DFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEI------------YKTLP--IREEI-LRALLNSDLIGFHTFD 267 (831)
Q Consensus 203 d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~------------f~~lp--~r~ei-l~~ll~~dligf~t~~ 267 (831)
|+|++|.++..+++.++.+. .++|+.+.+|..++.... .+..- .+..+ ...+-.+|.|.+.+..
T Consensus 122 Divh~~~~~~~~~~~~~~~~-~~~p~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~ 200 (499)
T 2r60_A 122 QVVTTHYGDGGLAGVLLKNI-KGLPFTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQ 200 (499)
T ss_dssp SEEEEEHHHHHHHHHHHHHH-HCCCEEEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHH
T ss_pred CEEEEcCCcchHHHHHHHHh-cCCcEEEEccCcccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHH
Confidence 89999998766666666544 368899999986542211 00000 00011 2234468998888876
Q ss_pred hHHHHHHHHHHHhC-CeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc------cCCcE
Q 044635 268 YARHFLSCCSRMLG-LTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH------DQGKV 340 (831)
Q Consensus 268 ~~~~Fl~~~~r~l~-~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~------~~~~~ 340 (831)
..+.+... ..+| ... . ....++.++|+|||.+.|... ........++++++ ..+++
T Consensus 201 ~~~~~~~~--~~~g~~~~-~----------~~~~ki~vi~ngvd~~~~~~~----~~~~~~~~~r~~~~~~~~~~~~~~~ 263 (499)
T 2r60_A 201 ERFGQYSH--DLYRGAVN-V----------EDDDKFSVIPPGVNTRVFDGE----YGDKIKAKITKYLERDLGSERMELP 263 (499)
T ss_dssp HHHHTTTS--GGGTTTCC-T----------TCGGGEEECCCCBCTTTSSSC----CCHHHHHHHHHHHHHHSCGGGTTSC
T ss_pred HHHHHHhh--hccccccc-c----------cCCCCeEEECCCcChhhcCcc----chhhhHHHHHHHhcccccccCCCCc
Confidence 55544320 0012 100 0 012256789999999877432 11223456667664 24788
Q ss_pred EEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCC----c---hhHHHHHHHHHHHHHHHhccCCCCC
Q 044635 341 MLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGR----G---KDVKEVQAETYSTVERINQTFGKPG 413 (831)
Q Consensus 341 iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~----~---~~~~~l~~~i~~lv~~IN~~~g~~~ 413 (831)
+|+++||+++.||+..+++|+.++.+++|+. +.|+++|... +. + ....++.+++++++.+.+
T Consensus 264 ~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~---~~l~i~G~~~-~~~~~y~~l~~~~~~y~~~l~~~~~~~~------- 332 (499)
T 2r60_A 264 AIIASSRLDQKKNHYGLVEAYVQNKELQDKA---NLVLTLRGIE-NPFEDYSRAGQEEKEILGKIIELIDNND------- 332 (499)
T ss_dssp EEEECSCCCGGGCHHHHHHHHHTCHHHHHHC---EEEEEESSCS-BTTTBCTTSCHHHHHHHHHHHHHHHHTT-------
T ss_pred EEEEeecCccccCHHHHHHHHHHHHHhCCCc---eEEEEECCCC-CcccccccccccchHHHHHHHHHHHhcC-------
Confidence 9999999999999999999999998776643 3477777421 11 0 112344667777776643
Q ss_pred CccEEEecCCCCHHHHHHHHHHc----CEeEECCCccCCCC---CCC-CCceEEEecccccccccC---CCceeCCCCHH
Q 044635 414 YDPVVLIDEPLKFYERIAYYVVA----ECCLVTAVRDGSEP---SSP-KKSMLVVSEFIGCSPSLS---GAIRVNPWNID 482 (831)
Q Consensus 414 ~~pv~~~~~~v~~~el~aly~~A----Dv~vvtS~~eGma~---~~~-~~g~lVlSe~~G~~~~l~---~allVnP~d~~ 482 (831)
..+.+.+.|.++.+++..+|+.| |++|+||.+|||.. ++. .+.|+|+|...|..+.+. +|++|+|.|++
T Consensus 333 l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~g~l~~~~d~~ 412 (499)
T 2r60_A 333 CRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPE 412 (499)
T ss_dssp CBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSBHHHHHTGGGTSSEEECTTCHH
T ss_pred CCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCCCHHHHhcCCceEEEeCCCCHH
Confidence 22223456789999999999999 99999999999821 221 155888888777777762 58999999999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhhhhcc-CCHHHHHHHHHHHHHHHHHHh
Q 044635 483 AVSDAMDSALEMADQEKQLRHEKHYRYVST-HDVGYWARSFLQDLERTCREH 533 (831)
Q Consensus 483 ~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~~l~~~~~~~ 533 (831)
++|++|.++++ .++.+....++.++++.+ +++...++++++-+.+.....
T Consensus 413 ~la~~i~~ll~-~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~~ 463 (499)
T 2r60_A 413 DIARGLLKAFE-SEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRK 463 (499)
T ss_dssp HHHHHHHHHHS-CHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhh
Confidence 99999999998 445566666677788876 999999999999888876653
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=2.7e-18 Score=192.91 Aligned_cols=283 Identities=12% Similarity=0.138 Sum_probs=194.4
Q ss_pred HcCCCCCEEEEeCccccchHHHHHhh-cC-CCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCC--eEeecCHHhHHHH
Q 044635 197 VINPEDDFVWVHDYHLMVLPTFLRKR-FN-RVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSD--LIGFHTFDYARHF 272 (831)
Q Consensus 197 ~~~~~~d~vwvhDyhL~llp~~lr~~-~~-~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~d--ligf~t~~~~~~F 272 (831)
..++ |+|++|.+...+.+.+.+.. .| ..++...+|...+... ..+-..+-.+| .|.+.+....+.+
T Consensus 79 ~~~~--Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~ii~~S~~~~~~~ 148 (413)
T 3oy2_A 79 VHKP--DIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKNIR--------ENLWWIFSHPKVVGVMAMSKCWISDI 148 (413)
T ss_dssp HHCC--SEEEEEECHHHHHHHHHHGGGCCSCCEEEEEECCCSBSCC--------GGGGGGGGCTTEEEEEESSTHHHHHH
T ss_pred hcCC--CEEEEcchHHHHHHHHHHhccCCCCCceeeeccccchhhH--------HHHHHHHhccCCceEEEcCHHHHHHH
Confidence 3455 89999944443333333222 22 3456666775444321 11222333477 8888887666655
Q ss_pred HHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cC--CcEEEEeccCcc
Q 044635 273 LSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQ--GKVMLLGVDDMD 349 (831)
Q Consensus 273 l~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~--~~~iil~VdRld 349 (831)
.. +|. ..++.++|+|||.+.| ...+++++ +. ++++|+++||+.
T Consensus 149 ~~-----~~~----------------~~~~~vi~ngvd~~~~-------------~~~~~~~~~~~~~~~~~il~vGr~~ 194 (413)
T 3oy2_A 149 CN-----YGC----------------KVPINIVSHFVDTKTI-------------YDARKLVGLSEYNDDVLFLNMNRNT 194 (413)
T ss_dssp HH-----TTC----------------CSCEEECCCCCCCCCC-------------TTHHHHTTCGGGTTSEEEECCSCSS
T ss_pred HH-----cCC----------------CCceEEeCCCCCHHHH-------------HHHHHhcCCCcccCceEEEEcCCCc
Confidence 43 222 1257789999998776 12344555 34 789999999999
Q ss_pred cccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHH
Q 044635 350 IFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYER 429 (831)
Q Consensus 350 ~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el 429 (831)
+.||+..+++|+.++.+++|+++ |+++|...... ..++++++.+++.+.+..-.-.-+..++++.|.++.+++
T Consensus 195 ~~Kg~~~li~a~~~l~~~~~~~~----l~ivG~g~~~~---~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~~ 267 (413)
T 3oy2_A 195 ARKRLDIYVLAAARFISKYPDAK----VRFLCNSHHES---KFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERV 267 (413)
T ss_dssp GGGTHHHHHHHHHHHHHHCTTCC----EEEEEECCTTC---SCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHHH
T ss_pred hhcCcHHHHHHHHHHHHhCCCcE----EEEEeCCcccc---hhhHHHHHHHHHHHcCcccccccccceeeccCcCCHHHH
Confidence 99999999999999999999987 88888543211 122455666666654321100000126788899999999
Q ss_pred HHHHHHcCEeEECCCccCCCC---CCC-CCceEEEecccccccccCC------------------Cc--eeCCCCHHHHH
Q 044635 430 IAYYVVAECCLVTAVRDGSEP---SSP-KKSMLVVSEFIGCSPSLSG------------------AI--RVNPWNIDAVS 485 (831)
Q Consensus 430 ~aly~~ADv~vvtS~~eGma~---~~~-~~g~lVlSe~~G~~~~l~~------------------al--lVnP~d~~~~A 485 (831)
..+|+.||++|+||..|||.. +++ .+.|+|+|...|..+.+.+ |+ +++|.|++++|
T Consensus 268 ~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la 347 (413)
T 3oy2_A 268 DMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLV 347 (413)
T ss_dssp HHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHH
T ss_pred HHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCCChHHHHccCcccccccccccccccccCcceeeCCCCHHHHH
Confidence 999999999999999999821 121 2568888888777777742 78 99999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHHH
Q 044635 486 DAMDSALEMADQEKQLRHEKHYRYV-STHDVGYWARSFLQDLERTCRE 532 (831)
Q Consensus 486 ~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~~~~ 532 (831)
++| +++. .++++....++.++++ ..+++..+++++++-+++..+.
T Consensus 348 ~~i-~l~~-~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~ 393 (413)
T 3oy2_A 348 EAF-TFFK-DEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRV 393 (413)
T ss_dssp HHH-HHTT-SHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC-
T ss_pred HHH-HHhc-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 999 9997 5556666667778877 5689999999999988887654
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=99.79 E-value=3.9e-18 Score=196.07 Aligned_cols=290 Identities=13% Similarity=0.150 Sum_probs=197.3
Q ss_pred CCEEEEeCccccchHHHHHhh-cCCCeEEEEEeccCCCh----HHhhc--CCC-------------hHHHHHHHhcCCeE
Q 044635 202 DDFVWVHDYHLMVLPTFLRKR-FNRVKLGFFLHSPFPSS----EIYKT--LPI-------------REEILRALLNSDLI 261 (831)
Q Consensus 202 ~d~vwvhDyhL~llp~~lr~~-~~~~~i~~flH~PfP~~----e~f~~--lp~-------------r~eil~~ll~~dli 261 (831)
.|+|++|+++..+++.++++. ..++|+.+.+|..++.. ..+.. +|. ..-.-..+-.+|.|
T Consensus 131 ~DiIh~~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v 210 (485)
T 1rzu_A 131 PDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATAL 210 (485)
T ss_dssp CSEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEE
T ss_pred CCEEEecccchhHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCEE
Confidence 389999999988888888764 46789999999876431 11111 110 11223344568999
Q ss_pred eecCHHhHHHHHHH-H----HHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCC-----------cchHH
Q 044635 262 GFHTFDYARHFLSC-C----SRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSL-----------PGTEA 325 (831)
Q Consensus 262 gf~t~~~~~~Fl~~-~----~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~-----------~~~~~ 325 (831)
...+....+.+.+. . ..+++. ...++.++|+|||.+.|.+.... +....
T Consensus 211 i~~S~~~~~~~~~~~~g~~~~~~~~~---------------~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (485)
T 1rzu_A 211 STVSPSYAEEILTAEFGMGLEGVIGS---------------RAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRAL 275 (485)
T ss_dssp EESCHHHHHHTTSHHHHTTCHHHHHT---------------TGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHH
T ss_pred EecCHhHHHHHhccccCcchHHHHHh---------------hcCCceEEcCCCcccccCCcccccccccccccchhhHHH
Confidence 98888766655431 0 000000 11256789999999887543210 01112
Q ss_pred HHHHHHHHhc-cCC-cEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHH
Q 044635 326 KVSELIKQFH-DQG-KVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVE 403 (831)
Q Consensus 326 ~~~~lr~~~~-~~~-~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~ 403 (831)
....++++++ +.+ +++|+++||+++.||+..+++|+.++.+ +++ .|+++|. ++ .++++++++++.
T Consensus 276 ~~~~~r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~----~l~ivG~-----g~--~~~~~~l~~~~~ 342 (485)
T 1rzu_A 276 NKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--LGG----RLVVLGA-----GD--VALEGALLAAAS 342 (485)
T ss_dssp HHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--TTC----EEEEEEC-----BC--HHHHHHHHHHHH
T ss_pred hHHHHHHhcCCCCCCCeEEEEEccCccccCHHHHHHHHHHHHh--cCc----eEEEEeC-----Cc--hHHHHHHHHHHH
Confidence 3456788887 443 6799999999999999999999999876 344 4888884 32 134566666666
Q ss_pred HHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCCC---CCCC-CceEEEecccccccccC--------
Q 044635 404 RINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSLS-------- 471 (831)
Q Consensus 404 ~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l~-------- 471 (831)
+.+ ..|+++.+. +.+++..+|+.||++|+||.+|||.. +++. +.|+|+|...|..+.+.
T Consensus 343 ~~~--------~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~ 413 (485)
T 1rzu_A 343 RHH--------GRVGVAIGY-NEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALA 413 (485)
T ss_dssp HTT--------TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHH
T ss_pred hCC--------CcEEEecCC-CHHHHHHHHhcCCEEEECcccCCCCHHHHHHHHCCCCEEEeCCCChhheeccccccccc
Confidence 542 147766766 88888999999999999999999821 2222 45888888877777773
Q ss_pred ----CCceeCCCCHHHHHHHHHHHhc--CCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHH
Q 044635 472 ----GAIRVNPWNIDAVSDAMDSALE--MADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTC 530 (831)
Q Consensus 472 ----~allVnP~d~~~~A~ai~~aL~--m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 530 (831)
+|++++|.|++++|++|.+++. ..++.+....++.++ ..+++...++++++-+++..
T Consensus 414 ~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~~y~~~~ 476 (485)
T 1rzu_A 414 SKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAALYSQLI 476 (485)
T ss_dssp TTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHHHHHHHHT
T ss_pred ccCCcceEeCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH--HhCChHHHHHHHHHHHHHhh
Confidence 5799999999999999999994 244444444444443 77899998888887776653
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=2.4e-18 Score=192.30 Aligned_cols=280 Identities=12% Similarity=0.105 Sum_probs=188.6
Q ss_pred HHcCCCCCEEEEeCccccchHHHHHhhc--CCCeEEEEEeccCCChHHhhcCCChHHH-HHHHhcCCeEeecCHHhHHHH
Q 044635 196 EVINPEDDFVWVHDYHLMVLPTFLRKRF--NRVKLGFFLHSPFPSSEIYKTLPIREEI-LRALLNSDLIGFHTFDYARHF 272 (831)
Q Consensus 196 ~~~~~~~d~vwvhDyhL~llp~~lr~~~--~~~~i~~flH~PfP~~e~f~~lp~r~ei-l~~ll~~dligf~t~~~~~~F 272 (831)
+..++ |+|++|......++.++.++. +++|+.+.+|-..+ ..+..-+....+ -..+-.+|.|-..+....+.+
T Consensus 96 ~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~--~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~ 171 (394)
T 2jjm_A 96 QRENL--DILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDI--TVLGSDPSLNNLIRFGIEQSDVVTAVSHSLINET 171 (394)
T ss_dssp HHHTC--SEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHH--HTTTTCTTTHHHHHHHHHHSSEEEESCHHHHHHH
T ss_pred HHcCC--CEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcc--cccCCCHHHHHHHHHHHhhCCEEEECCHHHHHHH
Confidence 33455 899999776554445443333 26899999997422 111122222223 333446899999888766655
Q ss_pred HHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccc
Q 044635 273 LSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIF 351 (831)
Q Consensus 273 l~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~ 351 (831)
.. ..+. ..++.++|+|+|.+.|... + ...++++++ +.++++|+++||+.+.
T Consensus 172 ~~----~~~~----------------~~~~~vi~ngv~~~~~~~~---~-----~~~~~~~~~~~~~~~~i~~~G~~~~~ 223 (394)
T 2jjm_A 172 HE----LVKP----------------NKDIQTVYNFIDERVYFKR---D-----MTQLKKEYGISESEKILIHISNFRKV 223 (394)
T ss_dssp HH----HTCC----------------SSCEEECCCCCCTTTCCCC---C-----CHHHHHHTTCC---CEEEEECCCCGG
T ss_pred HH----hhCC----------------cccEEEecCCccHHhcCCc---c-----hHHHHHHcCCCCCCeEEEEeeccccc
Confidence 43 1111 1256789999998876422 1 135667776 4677899999999999
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHH
Q 044635 352 KGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIA 431 (831)
Q Consensus 352 KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~a 431 (831)
||+..+++|++.+.++ +++ .|+++|. ++..++++ +++.+.+ .. ..|.+ .+. .+++..
T Consensus 224 Kg~~~li~a~~~l~~~-~~~----~l~i~G~-----g~~~~~l~----~~~~~~~----l~--~~v~~-~g~--~~~~~~ 280 (394)
T 2jjm_A 224 KRVQDVVQAFAKIVTE-VDA----KLLLVGD-----GPEFCTIL----QLVKNLH----IE--DRVLF-LGK--QDNVAE 280 (394)
T ss_dssp GTHHHHHHHHHHHHHS-SCC----EEEEECC-----CTTHHHHH----HHHHTTT----CG--GGBCC-CBS--CSCTHH
T ss_pred cCHHHHHHHHHHHHhh-CCC----EEEEECC-----chHHHHHH----HHHHHcC----CC--CeEEE-eCc--hhhHHH
Confidence 9999999999999776 444 4888883 34433443 4443322 10 12433 443 578999
Q ss_pred HHHHcCEeEECCCccCCCC---CC-CCCceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHH
Q 044635 432 YYVVAECCLVTAVRDGSEP---SS-PKKSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHE 504 (831)
Q Consensus 432 ly~~ADv~vvtS~~eGma~---~~-~~~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~ 504 (831)
+|+.||++|+||..||+.. ++ ..+.|+|+|...|..+.+ .+|++++|.|++++|++|.++++. ++.+....+
T Consensus 281 ~~~~adv~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~ 359 (394)
T 2jjm_A 281 LLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKD-EELHRNMGE 359 (394)
T ss_dssp HHHTCSEEEECCSCCSCCHHHHHHHHTTCCEEEECCTTSTTTCCBTTTEEEECTTCHHHHHHHHHHHHHC-HHHHHHHHH
T ss_pred HHHhCCEEEeccccCCCchHHHHHHhcCCCEEEecCCChHHHhhcCCceEEeCCCCHHHHHHHHHHHHcC-HHHHHHHHH
Confidence 9999999999999999821 11 115688888887777777 368999999999999999999984 455555666
Q ss_pred HHhhhh-ccCCHHHHHHHHHHHHHHHHH
Q 044635 505 KHYRYV-STHDVGYWARSFLQDLERTCR 531 (831)
Q Consensus 505 ~~~~~v-~~~~~~~W~~~~l~~l~~~~~ 531 (831)
+.++++ ..+++..+++++++-+++..+
T Consensus 360 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 387 (394)
T 2jjm_A 360 RARESVYEQFRSEKIVSQYETIYYDVLR 387 (394)
T ss_dssp HHHHHHHHHSCHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 777877 889999999988888776543
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.6e-17 Score=185.51 Aligned_cols=273 Identities=12% Similarity=0.076 Sum_probs=196.4
Q ss_pred HHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHH
Q 044635 196 EVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSC 275 (831)
Q Consensus 196 ~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~ 275 (831)
+..++ |+|++|.+....+..++.+. .+.|+.+.+|..+|....++.+-..-+ ..+-.+|.+-+.+....+.+.+.
T Consensus 104 ~~~~~--Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~--~~~~~~d~ii~~s~~~~~~~~~~ 178 (406)
T 2gek_A 104 AEGDF--DVLHIHEPNAPSLSMLALQA-AEGPIVATFHTSTTKSLTLSVFQGILR--PYHEKIIGRIAVSDLARRWQMEA 178 (406)
T ss_dssp HHHCC--SEEEEECCCSSSHHHHHHHH-EESSEEEEECCCCCSHHHHHHHHSTTH--HHHTTCSEEEESSHHHHHHHHHH
T ss_pred HhcCC--CEEEECCccchHHHHHHHHh-cCCCEEEEEcCcchhhhhHHHHHHHHH--HHHhhCCEEEECCHHHHHHHHHh
Confidence 33455 89999999988775555443 368999999999887644432211111 45567999999997666665541
Q ss_pred HHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCc-ccccCH
Q 044635 276 CSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDM-DIFKGI 354 (831)
Q Consensus 276 ~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRl-d~~KGi 354 (831)
++ .. ++ ++|+|+|...|...... ..+ ..++++|+++||+ .+.||+
T Consensus 179 ----~~---------------~~--~~-vi~~~v~~~~~~~~~~~-----------~~~-~~~~~~i~~~G~~~~~~Kg~ 224 (406)
T 2gek_A 179 ----LG---------------SD--AV-EIPNGVDVASFADAPLL-----------DGY-PREGRTVLFLGRYDEPRKGM 224 (406)
T ss_dssp ----HS---------------SC--EE-ECCCCBCHHHHHTCCCC-----------TTC-SCSSCEEEEESCTTSGGGCH
T ss_pred ----cC---------------CC--cE-EecCCCChhhcCCCchh-----------hhc-cCCCeEEEEEeeeCccccCH
Confidence 11 11 46 89999999888643211 011 1356899999999 999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHH
Q 044635 355 SLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYV 434 (831)
Q Consensus 355 ~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~ 434 (831)
..+++|+.++.+++|+++ |+++|. ++. +++++.+.++ .+.+.+.|.++.+++..+|+
T Consensus 225 ~~li~a~~~l~~~~~~~~----l~i~G~-----~~~-~~l~~~~~~~-------------~~~v~~~g~~~~~~~~~~~~ 281 (406)
T 2gek_A 225 AVLLAALPKLVARFPDVE----ILIVGR-----GDE-DELREQAGDL-------------AGHLRFLGQVDDATKASAMR 281 (406)
T ss_dssp HHHHHHHHHHHTTSTTCE----EEEESC-----SCH-HHHHHHTGGG-------------GGGEEECCSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCeE----EEEEcC-----CcH-HHHHHHHHhc-------------cCcEEEEecCCHHHHHHHHH
Confidence 999999999998888776 888883 333 3444433222 12234577999999999999
Q ss_pred HcCEeEECCC-ccCCCC---CCCC-CceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 044635 435 VAECCLVTAV-RDGSEP---SSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKH 506 (831)
Q Consensus 435 ~ADv~vvtS~-~eGma~---~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~ 506 (831)
.||++|+||. .||+.. ++.. +.|+|+|...|..+.+ .+|++++|.|+++++++|.++++. ++.+....++.
T Consensus 282 ~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~~~ 360 (406)
T 2gek_A 282 SADVYCAPHLGGESFGIVLVEAMAAGTAVVASDLDAFRRVLADGDAGRLVPVDDADGMAAALIGILED-DQLRAGYVARA 360 (406)
T ss_dssp HSSEEEECCCSCCSSCHHHHHHHHHTCEEEECCCHHHHHHHTTTTSSEECCTTCHHHHHHHHHHHHHC-HHHHHHHHHHH
T ss_pred HCCEEEecCCCCCCCchHHHHHHHcCCCEEEecCCcHHHHhcCCCceEEeCCCCHHHHHHHHHHHHcC-HHHHHHHHHHH
Confidence 9999999996 999821 1211 4577778777766666 358999999999999999999984 45555566677
Q ss_pred hhhhccCCHHHHHHHHHHHHHHHHH
Q 044635 507 YRYVSTHDVGYWARSFLQDLERTCR 531 (831)
Q Consensus 507 ~~~v~~~~~~~W~~~~l~~l~~~~~ 531 (831)
++++..+++...++++++-+++..+
T Consensus 361 ~~~~~~~s~~~~~~~~~~~~~~~~~ 385 (406)
T 2gek_A 361 SERVHRYDWSVVSAQIMRVYETVSG 385 (406)
T ss_dssp HHHGGGGBHHHHHHHHHHHHHHHCC
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 8888889999999988888776644
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.77 E-value=3.6e-18 Score=183.19 Aligned_cols=225 Identities=15% Similarity=0.167 Sum_probs=153.2
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHH-------HhhcCCCeEEEECCCCHhhHHHHhCCC----CCceEEecC
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNS-------LCRDKNNMVFLVSAKSRKTLAEWFSPC----ENLGIAAEH 640 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~-------L~~d~g~~V~I~SGR~~~~l~~~~~~~----~~~~liaen 640 (831)
.+|+|+||+||||++ .. +++++..++.+ +..+++..++++|||+...+..++..+ ....+++.+
T Consensus 21 ~~kliifDlDGTLld---s~--i~~~~~~~l~~~~~~l~~~~~~~g~~~~~~tGr~~~~~~~~~~~~g~~~~~~~~i~~~ 95 (289)
T 3gyg_A 21 PQYIVFCDFDETYFP---HT--IDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESILDKMGRGKFRYFPHFIASDL 95 (289)
T ss_dssp CSEEEEEETBTTTBC---SS--CCHHHHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHTTCCBCCSEEEETT
T ss_pred CCeEEEEECCCCCcC---CC--CCcchHHHHHHHHHHHHHHHhcCCcEEEEEcCCCHHHHHHHHHhhccCCCCCeEeecC
Confidence 578999999999999 33 77777777763 445579999999999999988877643 234588888
Q ss_pred CEEEEeCC---Cce----EEEcCCcCCccHHHHHHHHHHHHhccC-----CCeeEeeccceEEEeeccCCCccchHHHHH
Q 044635 641 GYFFRLRR---DEE----WETCIPVADCGWKQIAEPVMKLYTETT-----DGSTIEDKETALVWSYEDADPDFGSCQAKE 708 (831)
Q Consensus 641 Ga~i~~~~---~~~----w~~~~~~~~~~w~~~v~~il~~~~e~~-----~gs~ie~k~~~l~~~~~~~d~~~~~~~a~e 708 (831)
|..++... ... |...... . ...+.+.++++.+.+.. ..+..+.+...+.++|+..++... .+
T Consensus 96 g~~i~~~~~ng~~~~~~~~~~~~~~-~-~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~----~~ 169 (289)
T 3gyg_A 96 GTEITYFSEHNFGQQDNKWNSRINE-G-FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEIND----KK 169 (289)
T ss_dssp TTEEEECCSSSTTEECHHHHHHHHT-T-CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHH----HH
T ss_pred CceEEEEcCCCcEeecCchhhhhcc-c-CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccc----hH
Confidence 88777632 211 1111111 1 22456777777765431 112223334456677776543211 12
Q ss_pred HHHHHHhHhcCCC--eEEEEc---------CeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHc
Q 044635 709 LLDHLESVLANEP--VTVKSG---------QNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVI 777 (831)
Q Consensus 709 l~~~L~~~l~~~~--v~v~~g---------~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a 777 (831)
....+...+...+ ..+... ..++|+.|.+.+|+.+++++++.+ |++++++++|||+.||++|++.+
T Consensus 170 ~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~---~~~~~~~~~~GDs~~D~~~~~~a 246 (289)
T 3gyg_A 170 NLLAIEKICEEYGVSVNINRCNPLAGDPEDSYDVDFIPIGTGKNEIVTFMLEKY---NLNTERAIAFGDSGNDVRMLQTV 246 (289)
T ss_dssp HHHHHHHHHHHHTEEEEEEECCGGGTCCTTEEEEEEEESCCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHTTS
T ss_pred HHHHHHHHHHHcCCCEEEEEccccccCCCCceEEEEEeCCCCHHHHHHHHHHHc---CCChhhEEEEcCCHHHHHHHHhC
Confidence 2233333333223 233332 378999999999999999999999 99999999999999999999999
Q ss_pred chhcCCCCCCCCCceEEEEeCCC----CcccceEeCC--hhHHHHHHHHHHhh
Q 044635 778 ISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLDD--TVEIVRLMQGLACV 824 (831)
Q Consensus 778 ~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~d--~~eV~~~L~~L~~~ 824 (831)
+ ++|+||+. +..|+|++.+ .++|+++|+++.+.
T Consensus 247 g--------------~~~~~~~~~~~~~~~a~~v~~~~~~~gv~~~~~~~~~~ 285 (289)
T 3gyg_A 247 G--------------NGYLLKNATQEAKNLHNLITDSEYSKGITNTLKKLIGF 285 (289)
T ss_dssp S--------------EEEECTTCCHHHHHHCCCBCSSCHHHHHHHHHHHHTCC
T ss_pred C--------------cEEEECCccHHHHHhCCEEcCCCCcCHHHHHHHHHHHH
Confidence 7 57888886 3578888865 46699999987653
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=3e-18 Score=206.85 Aligned_cols=308 Identities=13% Similarity=0.131 Sum_probs=198.8
Q ss_pred CCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHH-------------HHHHhcCCeEeecCHHh
Q 044635 202 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEI-------------LRALLNSDLIGFHTFDY 268 (831)
Q Consensus 202 ~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~ei-------------l~~ll~~dligf~t~~~ 268 (831)
-|+|..|++...+++.++.++. ++|+.+..|.-.+..-......| ..+ ...+-.||.|...|...
T Consensus 408 PDVIHsH~~~sglva~llar~~-gvP~V~T~Hsl~~~k~~~~~~~~-~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~ 485 (816)
T 3s28_A 408 PDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYW-KKLDDKYHFSCQFTADIFAMNHTDFIITSTFQE 485 (816)
T ss_dssp CSEEEEEHHHHHHHHHHHHHHH-TCCEEEECSCCHHHHSTTTTTTH-HHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHH
T ss_pred CeEEEeCCchHHHHHHHHHHHc-CCCEEEEEecccccccccccchh-hhHHHHHHHHHHHHHHHHHHHhCCEEEECCHHH
Confidence 3899999777666666666554 78999999975322111111111 111 12456789998888766
Q ss_pred HHHHHHHHHHHhCCeecccC-----c-e---eeEEEcCEEEEEEEeecccChHHHHHhhCCcc----hHHHHHHH-----
Q 044635 269 ARHFLSCCSRMLGLTYESKR-----G-Y---IGLEYYGRTVSIKILPVGIHMGQLQSVLSLPG----TEAKVSEL----- 330 (831)
Q Consensus 269 ~~~Fl~~~~r~l~~~~~~~~-----~-~---~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~----~~~~~~~l----- 330 (831)
+++....+. .+.... + + -++..... ++.++|+|||.+.|.+...... .......+
T Consensus 486 ~~~l~~~~~-----~y~~~~~~~~p~Lyr~~~gI~~~~~--ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~ 558 (816)
T 3s28_A 486 IAGSKETVG-----QYESHTAFTLPGLYRVVHGIDVFDP--KFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDV 558 (816)
T ss_dssp HHCCSSSCC-----TTGGGSSEEETTTEEEEESCCTTCT--TEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSC
T ss_pred HHHHHHHHH-----HhhhhhccccchhhhcccccccCCC--CEEEECCCcCHHHcCccchhhhhhhhccccccccccchh
Confidence 653211000 000000 0 0 00111111 7889999999998865432211 01111111
Q ss_pred --HHHhc---cCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCC--CCCchhHHHHHHHHHHHHH
Q 044635 331 --IKQFH---DQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPA--RGRGKDVKEVQAETYSTVE 403 (831)
Q Consensus 331 --r~~~~---~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~--r~~~~~~~~l~~~i~~lv~ 403 (831)
++.++ ..++++|+++||+++.||+..+++|+.++.+.+|+++ |+++|.+. .....+..+..+++.++++
T Consensus 559 ~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~----LvIvG~g~~~~~~~~e~~~~~~~L~~li~ 634 (816)
T 3s28_A 559 ENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELAN----LVVVGGDRRKESKDNEEKAEMKKMYDLIE 634 (816)
T ss_dssp CBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCE----EEEECCCTTSCCCCHHHHHHHHHHHHHHH
T ss_pred hHHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeE----EEEEeCCCcccccchhhHHHHHHHHHHHH
Confidence 12221 3568899999999999999999999999988877665 99998654 2223344456677777777
Q ss_pred HHhccCCCCCCccEEEec---CCCCHHHHHHHHH-HcCEeEECCCccCCCC---CCCC-CceEEEeccccccccc---CC
Q 044635 404 RINQTFGKPGYDPVVLID---EPLKFYERIAYYV-VAECCLVTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSL---SG 472 (831)
Q Consensus 404 ~IN~~~g~~~~~pv~~~~---~~v~~~el~aly~-~ADv~vvtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l---~~ 472 (831)
+.+.. ..|.++. +.++.+++..+|+ +||+||+||..|||.. +++. +.|+|+|..+|..+.+ .+
T Consensus 635 ~lgL~------~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd~GG~~EiV~dg~~ 708 (816)
T 3s28_A 635 EYKLN------GQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKS 708 (816)
T ss_dssp HTTCB------BBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEESSBTHHHHCCBTTT
T ss_pred HcCCC------CcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeCCCChHHHHccCCc
Confidence 64321 1355443 2455689999999 6899999999999821 1111 5688888888888777 36
Q ss_pred CceeCCCCHHHHHHHHHHHh----cCCHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHHHHH
Q 044635 473 AIRVNPWNIDAVSDAMDSAL----EMADQEKQLRHEKHYRYV-STHDVGYWARSFLQDLERT 529 (831)
Q Consensus 473 allVnP~d~~~~A~ai~~aL----~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~ 529 (831)
|++|+|.|++++|++|.+++ .. ++.+....++.++++ ..+++..+++++++-+.+.
T Consensus 709 Gllv~p~D~e~LA~aI~~lL~~Ll~d-~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~ 769 (816)
T 3s28_A 709 GFHIDPYHGDQAADTLADFFTKCKED-PSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVY 769 (816)
T ss_dssp BEEECTTSHHHHHHHHHHHHHHHHHC-THHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCHHHHHHHHHHHHHHhccC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 89999999999999998877 54 455666667778877 7899999999988866543
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=6.4e-16 Score=179.03 Aligned_cols=308 Identities=14% Similarity=0.088 Sum_probs=190.6
Q ss_pred CEEEEeCccccchHHHHHhhcCCCeEEEEEecc----C----CChHHhhcCCC--------------hHH-HHHHHhcCC
Q 044635 203 DFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSP----F----PSSEIYKTLPI--------------REE-ILRALLNSD 259 (831)
Q Consensus 203 d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~P----f----P~~e~f~~lp~--------------r~e-il~~ll~~d 259 (831)
|++.+||||-.++|.+||++.++++..|+.|.- + -..+++..+.. .-. .-.++..||
T Consensus 183 dIiH~HDW~tg~~~~~Lk~~~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKaga~~AD 262 (725)
T 3nb0_A 183 IVAHFHEWLAGVALPLCRKRRIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERAAAHSAD 262 (725)
T ss_dssp EEEEEESGGGCTHHHHHHHTTCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHHHHHHSS
T ss_pred cEEEeCchhhhHHHHHHHHhCCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHHHHHhCC
Confidence 899999999999999999999999999999963 1 11111221110 111 233556788
Q ss_pred eEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCc-chHHHHHHH----HHHh
Q 044635 260 LIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLP-GTEAKVSEL----IKQF 334 (831)
Q Consensus 260 ligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~-~~~~~~~~l----r~~~ 334 (831)
.|-.-++.|++.-.. +++.. ...| +|+|||.+.|.+..... .-....+++ +..+
T Consensus 263 ~ITTVS~~yA~Ei~~----Ll~r~---------------~d~i--IpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~ 321 (725)
T 3nb0_A 263 VFTTVSQITAFEAEH----LLKRK---------------PDGI--LPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHF 321 (725)
T ss_dssp EEEESSHHHHHHHHH----HTSSC---------------CSEE--CCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEECCHHHHHHHHH----HhcCC---------------CCEE--EcCCccccccCcchhhHHHHHHHHHHHHHHHHhhc
Confidence 888888877764432 33321 1122 99999998875420000 001112233 2222
Q ss_pred ----c-cCCcEEEEe-ccCcc-cccCHHHHHHHHHHHHHh--CCCCCCcEEEEEEecCCCCCchhH-----HHHHHHHHH
Q 044635 335 ----H-DQGKVMLLG-VDDMD-IFKGISLKLLAMEQLLIQ--HPEWQGKVVLVQIANPARGRGKDV-----KEVQAETYS 400 (831)
Q Consensus 335 ----~-~~~~~iil~-VdRld-~~KGi~~~l~A~~~lL~~--~P~~~~~vvLvqig~p~r~~~~~~-----~~l~~~i~~ 400 (831)
+ ..+++++++ +||++ ..||++.+++|+.++... ..... +-|+..|-.|+...+... +.+.+++.+
T Consensus 322 ~~~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~-~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~ 400 (725)
T 3nb0_A 322 HGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSK-KTVVAFIVMPAKNNSFTVEALKGQAEVRALEN 400 (725)
T ss_dssp TTCCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCC-CEEEEEEECCCCEEEECHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCC-CcEEEEEEeCCCCCCCchhhhcchhHHHHHHH
Confidence 2 124666666 79999 579999999999998643 11222 223333344554333211 111111222
Q ss_pred HHH-----------------------------------------------------------------------------
Q 044635 401 TVE----------------------------------------------------------------------------- 403 (831)
Q Consensus 401 lv~----------------------------------------------------------------------------- 403 (831)
.+.
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r 480 (725)
T 3nb0_A 401 TVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIR 480 (725)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHH
Confidence 221
Q ss_pred HHhccCCCCCCccEEEecCCCCHH------HHHHHHHHcCEeEECCCccCCCC---CCCC-CceEEEecccccccccC--
Q 044635 404 RINQTFGKPGYDPVVLIDEPLKFY------ERIAYYVVAECCLVTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSLS-- 471 (831)
Q Consensus 404 ~IN~~~g~~~~~pv~~~~~~v~~~------el~aly~~ADv~vvtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l~-- 471 (831)
+++-.-...+-..|+++.+.++.. ++..+|+.||+||+||.+|||+. +++. +.|+|+|..+|+.+.+.
T Consensus 481 ~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG~~d~V~dg 560 (725)
T 3nb0_A 481 QVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYMEDL 560 (725)
T ss_dssp HHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTBHHHHHHHTT
T ss_pred hcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCCChhhhhhcc
Confidence 111111112334578888888876 58999999999999999999921 1111 56899999999876651
Q ss_pred --------CCcee---CCCCHHHHHHHHHHHhc----CCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHH
Q 044635 472 --------GAIRV---NPWNIDAVSDAMDSALE----MADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRE 532 (831)
Q Consensus 472 --------~allV---nP~d~~~~A~ai~~aL~----m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~ 532 (831)
+|++| +|.|+++++++|.++|. +++.++....++.++....++|..-++.+++..+.+...
T Consensus 561 ~~~~~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~~Yl~~Ye~aL~~ 636 (725)
T 3nb0_A 561 IETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYVKARQLALRR 636 (725)
T ss_dssp SCHHHHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 47888 45677777777766664 566666555556667778899999899888887776654
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.70 E-value=2.4e-16 Score=158.75 Aligned_cols=186 Identities=17% Similarity=0.162 Sum_probs=137.2
Q ss_pred eecccChHHHH--HhhCCcchHHHHHHHHHHhccCCcEEEEeccCcc-cccCHHHHHHHHHHHH--HhCCCCCCcEEEEE
Q 044635 305 LPVGIHMGQLQ--SVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMD-IFKGISLKLLAMEQLL--IQHPEWQGKVVLVQ 379 (831)
Q Consensus 305 ~P~GId~~~~~--~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld-~~KGi~~~l~A~~~lL--~~~P~~~~~vvLvq 379 (831)
+|+|||.+.|. +. .....+....++++++..++++|+++||+. +.||+..+++|+..+. +++|+++ |++
T Consensus 2 ipngvd~~~f~~~~~--~~~~~~~~~~~r~~~~~~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~----l~i 75 (200)
T 2bfw_A 2 SHNGIDCSFWNESYL--TGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMR----FII 75 (200)
T ss_dssp ---CCCTTTSSGGGS--CSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEE----EEE
T ss_pred CCCccChhhcccccc--ccchhhHHHHHHHHcCCCCCCEEEEeeccccccCCHHHHHHHHHHHHhhccCCCeE----EEE
Confidence 68999999886 32 112223356788888744667999999999 9999999999999997 7777654 888
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCCC---CC-CCC
Q 044635 380 IANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEP---SS-PKK 455 (831)
Q Consensus 380 ig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~---~~-~~~ 455 (831)
+|. ++ .++.+++.+++.+.+ .|+++.+.++.+++..+|+.||++|+||..||+.. ++ ..+
T Consensus 76 ~G~-----~~--~~~~~~l~~~~~~~~---------~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G 139 (200)
T 2bfw_A 76 IGK-----GD--PELEGWARSLEEKHG---------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG 139 (200)
T ss_dssp ECC-----BC--HHHHHHHHHHHHHCT---------TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTT
T ss_pred ECC-----CC--hHHHHHHHHHHHhcC---------CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCC
Confidence 884 22 123445555555432 36654789999999999999999999999999821 11 115
Q ss_pred ceEEEeccccccccc--CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcc
Q 044635 456 SMLVVSEFIGCSPSL--SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVST 512 (831)
Q Consensus 456 g~lVlSe~~G~~~~l--~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 512 (831)
.|+|+|...|..+.+ ..|++++|.|+++++++|.++++|.+++++...++.++++.+
T Consensus 140 ~PvI~~~~~~~~e~~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~ 198 (200)
T 2bfw_A 140 AIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMS 198 (200)
T ss_dssp CEEEEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEeCCCChHHHcCCCceEEecCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 688888887777766 468999999999999999999997777776666666666544
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=2.3e-17 Score=182.22 Aligned_cols=224 Identities=14% Similarity=0.114 Sum_probs=163.6
Q ss_pred cCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-
Q 044635 257 NSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH- 335 (831)
Q Consensus 257 ~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~- 335 (831)
.+|.|-+.+....+.|.+. +|.. ..++.++|+|+|.+.|.+.... .....++++++
T Consensus 136 ~~d~ii~~s~~~~~~~~~~----~~~~---------------~~~~~vi~ngv~~~~~~~~~~~----~~~~~~~~~~~~ 192 (374)
T 2iw1_A 136 KSTKLMMLTDKQIADFQKH----YQTE---------------PERFQILPPGIYPDRKYSEQIP----NSREIYRQKNGI 192 (374)
T ss_dssp CCCEEEESCHHHHHHHHHH----HCCC---------------GGGEEECCCCCCGGGSGGGSCT----THHHHHHHHTTC
T ss_pred CCcEEEEcCHHHHHHHHHH----hCCC---------------hhheEEecCCcCHHhcCcccch----hHHHHHHHHhCC
Confidence 5899999998777776542 2321 1246789999999888654321 22356788887
Q ss_pred cCCcEEEEeccCcccccCHHHHHHHHHHHHHh-CCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCC
Q 044635 336 DQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQ-HPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGY 414 (831)
Q Consensus 336 ~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~-~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~ 414 (831)
+.++++|+++||+.+.||+..+++|+..+.++ +|++ .|+++|.. +. +++ .+++.+.+..
T Consensus 193 ~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~----~l~i~G~g-----~~-~~~----~~~~~~~~~~------ 252 (374)
T 2iw1_A 193 KEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNT----LLFVVGQD-----KP-RKF----EALAEKLGVR------ 252 (374)
T ss_dssp CTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTE----EEEEESSS-----CC-HHH----HHHHHHHTCG------
T ss_pred CCCCeEEEEeccchhhcCHHHHHHHHHHhHhccCCce----EEEEEcCC-----CH-HHH----HHHHHHcCCC------
Confidence 56789999999999999999999999988766 4654 48888853 21 233 3344433211
Q ss_pred ccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCCC---CCC-CCceEEEeccccccccc---CCCceeC-CCCHHHHHH
Q 044635 415 DPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEP---SSP-KKSMLVVSEFIGCSPSL---SGAIRVN-PWNIDAVSD 486 (831)
Q Consensus 415 ~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~---~~~-~~g~lVlSe~~G~~~~l---~~allVn-P~d~~~~A~ 486 (831)
..|.+. ++ .+++..+|+.||++|+||..||+.. ++. .+.|+|+|...|..+.+ .+|++++ |.|++++|+
T Consensus 253 ~~v~~~-g~--~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~~~~~~l~~ 329 (374)
T 2iw1_A 253 SNVHFF-SG--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNE 329 (374)
T ss_dssp GGEEEE-SC--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHH
T ss_pred CcEEEC-CC--cccHHHHHHhcCEEEeccccCCcccHHHHHHHCCCCEEEecCCCchhhhccCCceEEeCCCCCHHHHHH
Confidence 135554 44 5689999999999999999999821 111 15588888888877777 4689997 999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHH
Q 044635 487 AMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLE 527 (831)
Q Consensus 487 ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 527 (831)
+|.++++ .++.++...++.++++.++++..|++.+.+-++
T Consensus 330 ~i~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 369 (374)
T 2iw1_A 330 VLRKALT-QSPLRMAWAENARHYADTQDLYSLPEKAADIIT 369 (374)
T ss_dssp HHHHHHH-CHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHH
T ss_pred HHHHHHc-ChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999998 455666666778888888888889888776664
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=4.2e-16 Score=170.59 Aligned_cols=238 Identities=11% Similarity=-0.006 Sum_probs=169.3
Q ss_pred HHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHH
Q 044635 195 MEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLS 274 (831)
Q Consensus 195 ~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~ 274 (831)
++..++ |+|++|.++..++. .+..+.| .+.+|..++... .+|.|-+.+....+.+.+
T Consensus 80 l~~~~~--Dvi~~~~~~~~~~~----~~~~~~p-v~~~h~~~~~~~----------------~~d~ii~~S~~~~~~~~~ 136 (342)
T 2iuy_A 80 LRTADV--DVVHDHSGGVIGPA----GLPPGTA-FISSHHFTTRPV----------------NPVGCTYSSRAQRAHCGG 136 (342)
T ss_dssp HHHCCC--SEEEECSSSSSCST----TCCTTCE-EEEEECSSSBCS----------------CCTTEEESCHHHHHHTTC
T ss_pred HHhcCC--CEEEECCchhhHHH----HhhcCCC-EEEecCCCCCcc----------------cceEEEEcCHHHHHHHhc
Confidence 344455 89999998765543 3445788 899999886431 189888888755544321
Q ss_pred HHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCH
Q 044635 275 CCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGI 354 (831)
Q Consensus 275 ~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi 354 (831)
..++.++|+|+|.+.|..... .. .++++|+++||+.+.||+
T Consensus 137 ------------------------~~~~~vi~ngvd~~~~~~~~~-------------~~--~~~~~i~~vG~~~~~Kg~ 177 (342)
T 2iuy_A 137 ------------------------GDDAPVIPIPVDPARYRSAAD-------------QV--AKEDFLLFMGRVSPHKGA 177 (342)
T ss_dssp ------------------------CTTSCBCCCCBCGGGSCCSTT-------------CC--CCCSCEEEESCCCGGGTH
T ss_pred ------------------------CCceEEEcCCCChhhcCcccc-------------cC--CCCCEEEEEeccccccCH
Confidence 124567899999987743211 12 456789999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHH
Q 044635 355 SLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYV 434 (831)
Q Consensus 355 ~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~ 434 (831)
..+++|++++ +++ |+++|. ++.. +++++++.+.+ ..|+ +.|.++.+++..+|+
T Consensus 178 ~~li~a~~~~-----~~~----l~i~G~-----g~~~----~~l~~~~~~~~--------~~v~-~~g~~~~~~l~~~~~ 230 (342)
T 2iuy_A 178 LEAAAFAHAC-----GRR----LVLAGP-----AWEP----EYFDEITRRYG--------STVE-PIGEVGGERRLDLLA 230 (342)
T ss_dssp HHHHHHHHHH-----TCC----EEEESC-----CCCH----HHHHHHHHHHT--------TTEE-ECCCCCHHHHHHHHH
T ss_pred HHHHHHHHhc-----CcE----EEEEeC-----cccH----HHHHHHHHHhC--------CCEE-EeccCCHHHHHHHHH
Confidence 9999999886 444 888883 3333 33344444443 1355 477899999999999
Q ss_pred HcCEeEECCC----------ccCCCC---CCC-CCceEEEeccccccccc-C----CCceeCCCCHHHHHHHHHHHhcCC
Q 044635 435 VAECCLVTAV----------RDGSEP---SSP-KKSMLVVSEFIGCSPSL-S----GAIRVNPWNIDAVSDAMDSALEMA 495 (831)
Q Consensus 435 ~ADv~vvtS~----------~eGma~---~~~-~~g~lVlSe~~G~~~~l-~----~allVnP~d~~~~A~ai~~aL~m~ 495 (831)
.||++|+||. .||+.. ++. .+.|+|+|...|..+.+ . +|++++| |++++|++|.++++
T Consensus 231 ~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~~~~g~~~~~-d~~~l~~~i~~l~~-- 307 (342)
T 2iuy_A 231 SAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVVGYGTDF-APDEARRTLAGLPA-- 307 (342)
T ss_dssp HCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGGEEECCSSSCC-CHHHHHHHHHTSCC--
T ss_pred hCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhcccCCCceEEcCC-CHHHHHHHHHHHHH--
Confidence 9999999999 899821 111 15688888887777766 3 5899999 99999999999986
Q ss_pred HHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHH
Q 044635 496 DQEKQLRHEKHYRYV-STHDVGYWARSFLQDLERTCR 531 (831)
Q Consensus 496 ~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~~~ 531 (831)
.++.++++ ..+++...++++++-+++..+
T Consensus 308 -------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 337 (342)
T 2iuy_A 308 -------SDEVRRAAVRLWGHVTIAERYVEQYRRLLA 337 (342)
T ss_dssp -------HHHHHHHHHHHHBHHHHHHHHHHHHHHHHT
T ss_pred -------HHHHHHHHHHhcCHHHHHHHHHHHHHHHHc
Confidence 22334444 667888888888887776653
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.56 E-value=2.4e-14 Score=139.65 Aligned_cols=157 Identities=11% Similarity=0.063 Sum_probs=110.3
Q ss_pred cEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEE
Q 044635 339 KVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVV 418 (831)
Q Consensus 339 ~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~ 418 (831)
+.+|+++||+.+.||+..+++|+.++ +++|+ +.|+++|. ++..++++ +++.+.+. .+
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l-~~~~~----~~l~i~G~-----g~~~~~~~----~~~~~~~~---------~v 58 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALS-KYKQD----IVLLLKGK-----GPDEKKIK----LLAQKLGV---------KA 58 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTC-TTGGG----EEEEEECC-----STTHHHHH----HHHHHHTC---------EE
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHh-ccCCC----eEEEEEeC-----CccHHHHH----HHHHHcCC---------eE
Confidence 46899999999999999999999986 44454 55888883 34434444 44444321 33
Q ss_pred EecCCCCHHHHHHHHHHcCEeEECCCccCCCC---CCCCCc--eEEEeccccccccc--CCCceeCCCCHHHHHHHHHHH
Q 044635 419 LIDEPLKFYERIAYYVVAECCLVTAVRDGSEP---SSPKKS--MLVVSEFIGCSPSL--SGAIRVNPWNIDAVSDAMDSA 491 (831)
Q Consensus 419 ~~~~~v~~~el~aly~~ADv~vvtS~~eGma~---~~~~~g--~lVlSe~~G~~~~l--~~allVnP~d~~~~A~ai~~a 491 (831)
.+ +.++.+++..+|+.||++|+||..||+.. ++...| |+|++...|..+++ .++.+++|.|+++++++|.++
T Consensus 59 ~~-g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l 137 (166)
T 3qhp_A 59 EF-GFVNSNELLEILKTCTLYVHAANVESEAIACLEAISVGIVPVIANSPLSATRQFALDERSLFEPNNAKDLSAKIDWW 137 (166)
T ss_dssp EC-CCCCHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSGGGEECTTCHHHHHHHHHHH
T ss_pred EE-eecCHHHHHHHHHhCCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCCceEEcCCCHHHHHHHHHHH
Confidence 45 89999999999999999999999999821 222335 44443555555554 457799999999999999999
Q ss_pred hcCCHHHHHHHHHHHhhhhccCCHHHHHH
Q 044635 492 LEMADQEKQLRHEKHYRYVSTHDVGYWAR 520 (831)
Q Consensus 492 L~m~~~er~~r~~~~~~~v~~~~~~~W~~ 520 (831)
++ .++.+....++.++++.++++..+++
T Consensus 138 ~~-~~~~~~~~~~~~~~~~~~~s~~~~~~ 165 (166)
T 3qhp_A 138 LE-NKLERERMQNEYAKSALNYTLENSVI 165 (166)
T ss_dssp HH-CHHHHHHHHHHHHHHHHHHC------
T ss_pred Hh-CHHHHHHHHHHHHHHHHHCChhhhhc
Confidence 98 45555555666777777777666554
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=1.9e-13 Score=151.60 Aligned_cols=278 Identities=17% Similarity=0.168 Sum_probs=166.2
Q ss_pred HHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHH-h-cCCeEeecCHHhHHH
Q 044635 194 IMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRAL-L-NSDLIGFHTFDYARH 271 (831)
Q Consensus 194 i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~l-l-~~dligf~t~~~~~~ 271 (831)
+++..+| |+|++|+.....++..+-.+..++|+.+..|-. .+...+. ++...+.+-+ . .+|.+-..+....+.
T Consensus 81 ~l~~~~p--Dvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 155 (384)
T 1vgv_A 81 ILAEFKP--DVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGL-RTGDLYS--PWPEEANRTLTGHLAMYHFSPTETSRQN 155 (384)
T ss_dssp HHHHHCC--SEEEEETTCHHHHHHHHHHHTTTCCEEEESCCC-CCSCTTS--STTHHHHHHHHHTTCSEEEESSHHHHHH
T ss_pred HHHHhCC--CEEEEeCCchHHHHHHHHHHHHCCCEEEEeccc-ccccccC--CCchHhhHHHHHhhccEEEcCcHHHHHH
Confidence 4455566 899999753334444444445578887766642 2222221 2223333333 2 389998888776665
Q ss_pred HHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeeccc-ChHHHHHhhCCcchHHHHHHHHHHhc-c-C-CcEEEEeccC
Q 044635 272 FLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGI-HMGQLQSVLSLPGTEAKVSELIKQFH-D-Q-GKVMLLGVDD 347 (831)
Q Consensus 272 Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GI-d~~~~~~~~~~~~~~~~~~~lr~~~~-~-~-~~~iil~VdR 347 (831)
|.. .|.. ..++.++|+|+ |...+......+ ......+++++++ . . ++.+++++||
T Consensus 156 l~~-----~g~~---------------~~~i~vi~n~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~vl~~~gr 214 (384)
T 1vgv_A 156 LLR-----ENVA---------------DSRIFITGNTVIDALLWVRDQVMS-SDKLRSELAANYPFIDPDKKMILVTGHR 214 (384)
T ss_dssp HHH-----TTCC---------------GGGEEECCCHHHHHHHHHHHHTTT-CHHHHHHHHTTCTTCCTTSEEEEEECCC
T ss_pred HHH-----cCCC---------------hhhEEEeCChHHHHHHhhhhcccc-chhhhHHHHHhccccCCCCCEEEEEeCC
Confidence 542 2321 01355678884 433332110000 0011235566653 2 2 3457889999
Q ss_pred cccc-cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCH
Q 044635 348 MDIF-KGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKF 426 (831)
Q Consensus 348 ld~~-KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~ 426 (831)
+.+. ||+..+++|+.++.+++|+++ |+.++.+ ++ +++++++++++. ...|.+ .+.++.
T Consensus 215 ~~~~~kg~~~li~a~~~l~~~~~~~~----l~i~~g~----~~---~~~~~l~~~~~~---------~~~v~~-~g~~~~ 273 (384)
T 1vgv_A 215 RESFGRGFEEICHALADIATTHQDIQ----IVYPVHL----NP---NVREPVNRILGH---------VKNVIL-IDPQEY 273 (384)
T ss_dssp BSSCCHHHHHHHHHHHHHHHHCTTEE----EEEECCB----CH---HHHHHHHHHHTT---------CTTEEE-ECCCCH
T ss_pred ccccchHHHHHHHHHHHHHhhCCCeE----EEEEcCC----CH---HHHHHHHHHhhc---------CCCEEE-eCCCCH
Confidence 9987 999999999999999888754 6654321 22 234455554321 114554 457788
Q ss_pred HHHHHHHHHcCEeEECCCccCCCCCCCC-CceEEEecc-ccccccc--CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHH
Q 044635 427 YERIAYYVVAECCLVTAVRDGSEPSSPK-KSMLVVSEF-IGCSPSL--SGAIRVNPWNIDAVSDAMDSALEMADQEKQLR 502 (831)
Q Consensus 427 ~el~aly~~ADv~vvtS~~eGma~~~~~-~g~lVlSe~-~G~~~~l--~~allVnP~d~~~~A~ai~~aL~m~~~er~~r 502 (831)
+++..+|+.||++|.|| .|+..++.. +.|+|++.. .|+.+.+ .+|++|+| |++++|++|.++|+.+ +.++..
T Consensus 274 ~~~~~~~~~ad~~v~~S--g~~~lEA~a~G~PvI~~~~~~~~~e~v~~g~g~lv~~-d~~~la~~i~~ll~d~-~~~~~~ 349 (384)
T 1vgv_A 274 LPFVWLMNHAWLILTDS--GGIQEEAPSLGKPVLVMRDTTERPEAVTAGTVRLVGT-DKQRIVEEVTRLLKDE-NEYQAM 349 (384)
T ss_dssp HHHHHHHHHCSEEEESS--STGGGTGGGGTCCEEEESSCCSCHHHHHHTSEEEECS-SHHHHHHHHHHHHHCH-HHHHHH
T ss_pred HHHHHHHHhCcEEEECC--cchHHHHHHcCCCEEEccCCCCcchhhhCCceEEeCC-CHHHHHHHHHHHHhCh-HHHhhh
Confidence 99999999999999999 444223333 447777776 4444444 46899988 9999999999999843 344443
Q ss_pred HHHHhhhhccCCHHHHHHHH
Q 044635 503 HEKHYRYVSTHDVGYWARSF 522 (831)
Q Consensus 503 ~~~~~~~v~~~~~~~W~~~~ 522 (831)
.++.+++...+++...++.+
T Consensus 350 ~~~~~~~~~~~~~~~i~~~~ 369 (384)
T 1vgv_A 350 SRAHNPYGDGQACSRILEAL 369 (384)
T ss_dssp HSSCCTTCCSCHHHHHHHHH
T ss_pred hhccCCCcCCCHHHHHHHHH
Confidence 44455555555555555443
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.50 E-value=1.3e-13 Score=152.29 Aligned_cols=271 Identities=15% Similarity=0.144 Sum_probs=165.1
Q ss_pred HHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHh--cCCeEeecCHHhHHH
Q 044635 194 IMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALL--NSDLIGFHTFDYARH 271 (831)
Q Consensus 194 i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll--~~dligf~t~~~~~~ 271 (831)
+++..+| |+|++|......++..+..+..++|+.+..|. +.+...+. ++...+.+.++ .+|.+-..+....+.
T Consensus 90 ~l~~~~p--Dvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 164 (375)
T 3beo_A 90 VMKEAKP--DIVLVHGDTTTTFIASLAAFYNQIPVGHVEAG-LRTWDKYS--PYPEEMNRQLTGVMADLHFSPTAKSATN 164 (375)
T ss_dssp HHHHHCC--SEEEEETTSHHHHHHHHHHHHTTCCEEEESCC-CCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHH
T ss_pred HHHHhCC--CEEEEeCCchHHHHHHHHHHHHCCCEEEEecc-cccccccC--CChhHhhhhHHhhhhheeeCCCHHHHHH
Confidence 3344566 89999865333333333333446788765553 22222222 33344555443 389998888766665
Q ss_pred HHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecc-cChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCccc
Q 044635 272 FLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVG-IHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDI 350 (831)
Q Consensus 272 Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~G-Id~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~ 350 (831)
+.. +|.. ..++.++|+| +|...+....... .++++++ +.++.+++++||+.+
T Consensus 165 ~~~-----~g~~---------------~~~i~vi~n~~~d~~~~~~~~~~~------~~~~~~~-~~~~~vl~~~gr~~~ 217 (375)
T 3beo_A 165 LQK-----ENKD---------------ESRIFITGNTAIDALKTTVKETYS------HPVLEKL-GNNRLVLMTAHRREN 217 (375)
T ss_dssp HHH-----TTCC---------------GGGEEECCCHHHHHHHHHCCSSCC------CHHHHTT-TTSEEEEEECCCGGG
T ss_pred HHH-----cCCC---------------cccEEEECChhHhhhhhhhhhhhh------HHHHHhc-cCCCeEEEEeccccc
Confidence 543 2321 1135678999 8877664321111 1344555 244567889999998
Q ss_pred c-cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHH
Q 044635 351 F-KGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYER 429 (831)
Q Consensus 351 ~-KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el 429 (831)
. ||+..+++|+.++.+++|+++ ++. +. +++ .++++++.++++. ...|++ .+.++..++
T Consensus 218 ~~K~~~~li~a~~~l~~~~~~~~----~i~-~~-----g~~-~~~~~~~~~~~~~---------~~~v~~-~g~~~~~~~ 276 (375)
T 3beo_A 218 LGEPMRNMFRAIKRLVDKHEDVQ----VVY-PV-----HMN-PVVRETANDILGD---------YGRIHL-IEPLDVIDF 276 (375)
T ss_dssp TTHHHHHHHHHHHHHHHHCTTEE----EEE-EC-----CSC-HHHHHHHHHHHTT---------CTTEEE-ECCCCHHHH
T ss_pred chhHHHHHHHHHHHHHhhCCCeE----EEE-eC-----CCC-HHHHHHHHHHhhc---------cCCEEE-eCCCCHHHH
Confidence 6 999999999999998888764 443 31 121 2445555554221 113554 567888999
Q ss_pred HHHHHHcCEeEECC---CccCCCCCCCCCceEEEecc-ccccccc--CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHH
Q 044635 430 IAYYVVAECCLVTA---VRDGSEPSSPKKSMLVVSEF-IGCSPSL--SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRH 503 (831)
Q Consensus 430 ~aly~~ADv~vvtS---~~eGma~~~~~~g~lVlSe~-~G~~~~l--~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~ 503 (831)
..+|+.||++|+|| +-|.|++ +.|+|++.. .|..+.+ .+|++|+| |++++|++|.++|+.+ +.++...
T Consensus 277 ~~~~~~ad~~v~~sg~~~lEA~a~----G~Pvi~~~~~~~~~e~v~~g~g~~v~~-d~~~la~~i~~ll~~~-~~~~~~~ 350 (375)
T 3beo_A 277 HNVAARSYLMLTDSGGVQEEAPSL----GVPVLVLRDTTERPEGIEAGTLKLAGT-DEETIFSLADELLSDK-EAHDKMS 350 (375)
T ss_dssp HHHHHTCSEEEECCHHHHHHHHHH----TCCEEECSSCCSCHHHHHTTSEEECCS-CHHHHHHHHHHHHHCH-HHHHHHC
T ss_pred HHHHHhCcEEEECCCChHHHHHhc----CCCEEEecCCCCCceeecCCceEEcCC-CHHHHHHHHHHHHhCh-HhHhhhh
Confidence 99999999999998 1123344 457777754 5554444 46788887 9999999999999843 3444333
Q ss_pred HHHhhhhccCCHHHHHHHHH
Q 044635 504 EKHYRYVSTHDVGYWARSFL 523 (831)
Q Consensus 504 ~~~~~~v~~~~~~~W~~~~l 523 (831)
++.+++...+++...++.+.
T Consensus 351 ~~~~~~~~~~~~~~i~~~~~ 370 (375)
T 3beo_A 351 KASNPYGDGRASERIVEAIL 370 (375)
T ss_dssp CCCCTTCCSCHHHHHHHHHH
T ss_pred hcCCCCCCCcHHHHHHHHHH
Confidence 44555555555555555443
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=5e-13 Score=150.47 Aligned_cols=164 Identities=16% Similarity=0.095 Sum_probs=118.3
Q ss_pred EEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEE
Q 044635 301 SIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQI 380 (831)
Q Consensus 301 ~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqi 380 (831)
++.++|+|||.+.|...... .. .++++|+++||+.+.||+ ++.+.+++|+++ |+++
T Consensus 198 ~i~vipngvd~~~f~~~~~~------------~~--~~~~~i~~vGrl~~~Kg~------~~~l~~~~~~~~----l~iv 253 (406)
T 2hy7_A 198 NVFHVGHGVDHNLDQLGDPS------------PY--AEGIHAVAVGSMLFDPEF------FVVASKAFPQVT----FHVI 253 (406)
T ss_dssp TEEECCCCBCTTHHHHHCSC------------SC--CSSEEEEEECCTTBCHHH------HHHHHHHCTTEE----EEEE
T ss_pred CEEEEcCCcChHhcCccccc------------cc--CCCcEEEEEeccccccCH------HHHHHHhCCCeE----EEEE
Confidence 68899999999988643211 11 345899999999999999 555666788765 8888
Q ss_pred ecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCCC---CCC----
Q 044635 381 ANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEP---SSP---- 453 (831)
Q Consensus 381 g~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~---~~~---- 453 (831)
|. |+ + .+. +..+-+.+.|.++.+++.++|+.||++|+||..||+.. +++
T Consensus 254 G~-----g~------------~----~~~---~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~ 309 (406)
T 2hy7_A 254 GS-----GM------------G----RHP---GYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLL 309 (406)
T ss_dssp SC-----SS------------C----CCT---TCCTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHH
T ss_pred eC-----ch------------H----Hhc---CCCCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHH
Confidence 83 22 1 111 22223345678999999999999999999999999832 344
Q ss_pred ---CCc-eEEEecccccccccCCCce-eCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHH
Q 044635 454 ---KKS-MLVVSEFIGCSPSLSGAIR-VNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQD 525 (831)
Q Consensus 454 ---~~g-~lVlSe~~G~~~~l~~all-VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~ 525 (831)
..| |+|+|.. ...-.+|++ |+|.|++++|++|.++|+.+. ++....+++...++++++-
T Consensus 310 eYla~G~PVIas~~---v~~~~~G~l~v~~~d~~~la~ai~~ll~~~~----------~~~~~~~sw~~~a~~~~~~ 373 (406)
T 2hy7_A 310 QYDFFGLPAVCPNA---VVGPYKSRFGYTPGNADSVIAAITQALEAPR----------VRYRQCLNWSDTTDRVLDP 373 (406)
T ss_dssp HHHHHTCCEEEEGG---GTCSCSSEEEECTTCHHHHHHHHHHHHHCCC----------CCCSCCCBHHHHHHHHHCG
T ss_pred HHhhCCCcEEEehh---cccCcceEEEeCCCCHHHHHHHHHHHHhCcc----------hhhhhcCCHHHHHHHHHHh
Confidence 445 6666655 111146889 999999999999999998774 1456778888777776544
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=3.5e-13 Score=152.12 Aligned_cols=156 Identities=7% Similarity=-0.003 Sum_probs=112.8
Q ss_pred EEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCc-ccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 044635 301 SIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDM-DIFKGISLKLLAMEQLLIQHPEWQGKVVLVQ 379 (831)
Q Consensus 301 ~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRl-d~~KGi~~~l~A~~~lL~~~P~~~~~vvLvq 379 (831)
.+.++|+|+|.+.|... .....+++.|+++||+ .+.||++.+|+||.++.+++|+. .++.|++
T Consensus 218 ~~~~i~~g~d~~~~~~~---------------~~~~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~-~~~~l~i 281 (413)
T 2x0d_A 218 DEYFFQPKINTTLKNYI---------------NDKRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRS-NEWKIIS 281 (413)
T ss_dssp EEEEECCCCCHHHHTTT---------------TSCCCCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTG-GGCEEEE
T ss_pred ceEEeCCCcCchhhccc---------------ccccCCCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCC-CceEEEE
Confidence 45678999998766321 0112456788999996 68999999999999999988861 1244888
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCCC---CCCCCc
Q 044635 380 IANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEP---SSPKKS 456 (831)
Q Consensus 380 ig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~---~~~~~g 456 (831)
+|... .. .+.+. ..-+.+.|.++.+|+.++|+.||+||+||..||++. +++.+|
T Consensus 282 vG~~~-----~~---------------~~l~~---~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G 338 (413)
T 2x0d_A 282 VGEKH-----KD---------------IALGK---GIHLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFG 338 (413)
T ss_dssp EESCC-----CC---------------EEEET---TEEEEEEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTT
T ss_pred EcCCc-----hh---------------hhcCC---cCcEEEcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCC
Confidence 88432 10 01121 123445678999999999999999999999998832 344456
Q ss_pred eEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCC
Q 044635 457 MLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMA 495 (831)
Q Consensus 457 ~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~ 495 (831)
.+|++...|+.+.+ .+|++|+|.|++++|++|.++++.+
T Consensus 339 ~PVV~~~~g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~~ 380 (413)
T 2x0d_A 339 LRVITNKYENKDLSNWHSNIVSLEQLNPENIAETLVELCMSF 380 (413)
T ss_dssp CEEEEECBTTBCGGGTBTTEEEESSCSHHHHHHHHHHHHHHT
T ss_pred CcEEEeCCCcchhhhcCCCEEEeCCCCHHHHHHHHHHHHcCH
Confidence 55555556666555 3589999999999999999999855
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.38 E-value=1e-12 Score=130.10 Aligned_cols=138 Identities=16% Similarity=0.093 Sum_probs=101.8
Q ss_pred cCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCc
Q 044635 336 DQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYD 415 (831)
Q Consensus 336 ~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~ 415 (831)
+.++++|+++||+.+.||+..+++|+.++ |+++ |+++|... ..+++++ ++.++..... +
T Consensus 20 ~~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~~~----l~i~G~~~-----~~~~l~~----~~~~~~~~l~--~-- 78 (177)
T 2f9f_A 20 KCYGDFWLSVNRIYPEKRIELQLEVFKKL----QDEK----LYIVGWFS-----KGDHAER----YARKIMKIAP--D-- 78 (177)
T ss_dssp CCCCSCEEEECCSSGGGTHHHHHHHHHHC----TTSC----EEEEBCCC-----TTSTHHH----HHHHHHHHSC--T--
T ss_pred CCCCCEEEEEeccccccCHHHHHHHHHhC----CCcE----EEEEecCc-----cHHHHHH----HHHhhhcccC--C--
Confidence 35778999999999999999999999886 6665 88888432 2223333 3331111111 1
Q ss_pred cEEEecCCCCHHHHHHHHHHcCEeEECCCccCCCC---CCC-CCceEEEeccccccccc---CCCceeCCCCHHHHHHHH
Q 044635 416 PVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEP---SSP-KKSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAM 488 (831)
Q Consensus 416 pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~---~~~-~~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai 488 (831)
.|.+ .+.++.+++..+|+.||++|+||..||+.. ++. .+.|+|+|...|..+.+ ..|+++ |.|+++++++|
T Consensus 79 ~v~~-~g~~~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~-~~d~~~l~~~i 156 (177)
T 2f9f_A 79 NVKF-LGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLV-NADVNEIIDAM 156 (177)
T ss_dssp TEEE-EESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEE-CSCHHHHHHHH
T ss_pred cEEE-eCCCCHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCccEEe-CCCHHHHHHHH
Confidence 2544 578999999999999999999999999821 111 15688888877767666 267889 99999999999
Q ss_pred HHHhcCCH
Q 044635 489 DSALEMAD 496 (831)
Q Consensus 489 ~~aL~m~~ 496 (831)
.++++.+.
T Consensus 157 ~~l~~~~~ 164 (177)
T 2f9f_A 157 KKVSKNPD 164 (177)
T ss_dssp HHHHHCTT
T ss_pred HHHHhCHH
Confidence 99998776
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.35 E-value=3.2e-12 Score=134.77 Aligned_cols=215 Identities=13% Similarity=0.098 Sum_probs=123.2
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECC---CCHhhHHHHhCCC----CCceEEecCCEEE
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSA---KSRKTLAEWFSPC----ENLGIAAEHGYFF 644 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG---R~~~~l~~~~~~~----~~~~liaenGa~i 644 (831)
++|+|+||+||||++ . +.++++++++|++|.+ .|..|+++|| |+...+.+.+..+ ...+++..||+.+
T Consensus 5 ~~kli~~DlDGTLl~---~-~~~~~~~~~ai~~l~~-~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~~~~ii~~~~~~~ 79 (266)
T 3pdw_A 5 TYKGYLIDLDGTMYN---G-TEKIEEACEFVRTLKD-RGVPYLFVTNNSSRTPKQVADKLVSFDIPATEEQVFTTSMATA 79 (266)
T ss_dssp CCSEEEEECSSSTTC---H-HHHHHHHHHHHHHHHH-TTCCEEEEESCCSSCHHHHHHHHHHTTCCCCGGGEEEHHHHHH
T ss_pred cCCEEEEeCcCceEe---C-CEeCccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHHHccCHHHHHH
Confidence 479999999999998 3 4567899999999987 6999999988 6777776666543 1224555555433
Q ss_pred EeC-----CCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhH---
Q 044635 645 RLR-----RDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESV--- 716 (831)
Q Consensus 645 ~~~-----~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~--- 716 (831)
..- ....+. . .. ..+...++.+ |..+........+.. .+..+......+....+...
T Consensus 80 ~~~~~~~~~~~~~~-~---~~----~~~~~~~~~~-----g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~ 144 (266)
T 3pdw_A 80 QHIAQQKKDASVYV-I---GE----EGIRQAIEEN-----GLTFGGENADFVVVG--IDRSITYEKFAVGCLAIRNGARF 144 (266)
T ss_dssp HHHHHHCTTCEEEE-E---SC----HHHHHHHHHT-----TCEECCTTCSEEEEC--CCTTCCHHHHHHHHHHHHTTCEE
T ss_pred HHHHhhCCCCEEEE-E---eC----hhHHHHHHHc-----CCccCCCCCCEEEEe--CCCCCCHHHHHHHHHHHHCCCeE
Confidence 210 111111 0 00 1222222221 111111111111111 11111111122222222221
Q ss_pred -hcCCCeEEEEcC----------------eEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCC-chhHHHHHHcc
Q 044635 717 -LANEPVTVKSGQ----------------NLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDD-RSDEDMFEVII 778 (831)
Q Consensus 717 -l~~~~v~v~~g~----------------~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~-~NDe~Mf~~a~ 778 (831)
..+......... ...|+.+.+.+|+.+++.+++++ |++++++++|||+ .||++|++.+|
T Consensus 145 i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~~Di~~~~~aG 221 (266)
T 3pdw_A 145 ISTNGDIAIPTERGLLPGNGSLTSVLTVSTGVQPVFIGKPESIIMEQAMRVL---GTDVSETLMVGDNYATDIMAGINAG 221 (266)
T ss_dssp EESCCCCEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSSHHHHHHHHHH---TCCGGGEEEEESCTTTHHHHHHHHT
T ss_pred EEEcCCceeECCCceEecchHHHHHHHHHhCCCccccCCCCHHHHHHHHHHc---CCChhhEEEECCCcHHHHHHHHHCC
Confidence 011111000000 12456778999999999999999 9999999999999 89999999998
Q ss_pred hhcCCCCCCCCCceEEEEeCCC-----Cc---ccceEeCChhHHHHHHHH
Q 044635 779 SSMAGPSIAPRAEVFACTVGRK-----PS---KAKYYLDDTVEIVRLMQG 820 (831)
Q Consensus 779 ~~~~~~~~~~~~~~~~v~vG~~-----~s---~A~y~l~d~~eV~~~L~~ 820 (831)
.. ++.|..|.. +. .|+|++++..++.+-.+.
T Consensus 222 ~~-----------~~~v~~g~~~~~~~~~~~~~~d~v~~~~~el~~~~~~ 260 (266)
T 3pdw_A 222 MD-----------TLLVHTGVTKREHMTDDMEKPTHAIDSLTEWIPYIEG 260 (266)
T ss_dssp CE-----------EEEECCC------CCTTSCCCSEEESSGGGGHHHHHH
T ss_pred Ce-----------EEEECCCCCChHHHHhcCCCCCEEeCCHHHHHHHhhc
Confidence 53 234444432 22 599999999988776553
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.33 E-value=8e-12 Score=138.28 Aligned_cols=244 Identities=16% Similarity=0.153 Sum_probs=147.6
Q ss_pred HHHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHh--cCCeEeecCHHhHH
Q 044635 193 RIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALL--NSDLIGFHTFDYAR 270 (831)
Q Consensus 193 ~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll--~~dligf~t~~~~~ 270 (831)
++.+..+| |+|++|++....++..+-.+..++|+. ..|.++.+...+. ++...+.+.++ .+|.+-..+....+
T Consensus 85 ~~l~~~~p--Dvv~~~~~~~~~~~~~~~a~~~~ip~v-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~ 159 (376)
T 1v4v_A 85 RALKEMGA--DYVLVHGDTLTTFAVAWAAFLEGIPVG-HVEAGLRSGNLKE--PFPEEANRRLTDVLTDLDFAPTPLAKA 159 (376)
T ss_dssp HHHHHTTC--SEEEEESSCHHHHHHHHHHHHTTCCEE-EETCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHH
T ss_pred HHHHHcCC--CEEEEeCChHHHHHHHHHHHHhCCCEE-EEeCCCccccccC--CCchHHHHHHHHHHhceeeCCCHHHHH
Confidence 34455566 899999876555654444444568875 4555543322222 22233333322 37888877776665
Q ss_pred HHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecc-cChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcc
Q 044635 271 HFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVG-IHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMD 349 (831)
Q Consensus 271 ~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~G-Id~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld 349 (831)
.|.. .|.. ..++.++|++ +|...+... ..+++++++ .++.+++++||+.
T Consensus 160 ~l~~-----~g~~---------------~~ki~vi~n~~~d~~~~~~~---------~~~~~~~~~-~~~~vl~~~gr~~ 209 (376)
T 1v4v_A 160 NLLK-----EGKR---------------EEGILVTGQTGVDAVLLAAK---------LGRLPEGLP-EGPYVTVTMHRRE 209 (376)
T ss_dssp HHHT-----TTCC---------------GGGEEECCCHHHHHHHHHHH---------HCCCCTTCC-SSCEEEECCCCGG
T ss_pred HHHH-----cCCC---------------cceEEEECCchHHHHhhhhh---------hhHHHHhcC-CCCEEEEEeCccc
Confidence 5542 1321 1134456664 443332211 011233342 3456788899999
Q ss_pred cccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHH
Q 044635 350 IFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYER 429 (831)
Q Consensus 350 ~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el 429 (831)
..||+..+++|+.++.+++|+++ |+.++. +++ .++++++++++. ...|++ .+.++..++
T Consensus 210 ~~k~~~~ll~a~~~l~~~~~~~~----lv~~~g----~~~---~~~~~l~~~~~~---------~~~v~~-~g~~g~~~~ 268 (376)
T 1v4v_A 210 NWPLLSDLAQALKRVAEAFPHLT----FVYPVH----LNP---VVREAVFPVLKG---------VRNFVL-LDPLEYGSM 268 (376)
T ss_dssp GGGGHHHHHHHHHHHHHHCTTSE----EEEECC----SCH---HHHHHHHHHHTT---------CTTEEE-ECCCCHHHH
T ss_pred chHHHHHHHHHHHHHHhhCCCeE----EEEECC----CCH---HHHHHHHHHhcc---------CCCEEE-ECCCCHHHH
Confidence 99999999999999998899865 655431 222 234455554321 114554 457788899
Q ss_pred HHHHHHcCEeEECCCccCCCCCCCC-CceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCC
Q 044635 430 IAYYVVAECCLVTAVRDGSEPSSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMA 495 (831)
Q Consensus 430 ~aly~~ADv~vvtS~~eGma~~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~ 495 (831)
..+|+.||++|.+| +|+..++.. +.|+|++...|..+++ ..|++++ .|++++|++|.++|+.+
T Consensus 269 ~~~~~~ad~~v~~S--~g~~lEA~a~G~PvI~~~~~~~~~~~~~~g~g~lv~-~d~~~la~~i~~ll~d~ 335 (376)
T 1v4v_A 269 AALMRASLLLVTDS--GGLQEEGAALGVPVVVLRNVTERPEGLKAGILKLAG-TDPEGVYRVVKGLLENP 335 (376)
T ss_dssp HHHHHTEEEEEESC--HHHHHHHHHTTCCEEECSSSCSCHHHHHHTSEEECC-SCHHHHHHHHHHHHTCH
T ss_pred HHHHHhCcEEEECC--cCHHHHHHHcCCCEEeccCCCcchhhhcCCceEECC-CCHHHHHHHHHHHHhCh
Confidence 99999999999999 776212222 3466666544444444 4577885 49999999999999843
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.32 E-value=2.8e-13 Score=142.11 Aligned_cols=219 Identities=16% Similarity=0.127 Sum_probs=123.0
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEEC---CCCHhhHHHHhCCC----CCceEEecCCEEE
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVS---AKSRKTLAEWFSPC----ENLGIAAEHGYFF 644 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~S---GR~~~~l~~~~~~~----~~~~liaenGa~i 644 (831)
++|+|+||+||||++.......+++.+.++++.+.+ .|..++++| ||+...+.+.+..+ +...+++.+|+.+
T Consensus 11 ~~k~i~fDlDGTLl~s~~~~~~~~~~~~~a~~~l~~-~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 89 (271)
T 2x4d_A 11 GVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKR-SRLKVRFCTNESAASRAELVGQLQRLGFDISEQEVTAPAPAAC 89 (271)
T ss_dssp TCCEEEECCBTTTEECCTTTCEECTTHHHHHHHHHH-SSSEEEEECCCCSSCHHHHHHHHHHTTCCCCGGGEECHHHHHH
T ss_pred cCCEEEEeCCCeEEecCCCCCccCcCHHHHHHHHHH-CCCcEEEEECCCCCCHHHHHHHHHHCCCCCCHHHeecHHHHHH
Confidence 479999999999998310045577888898999876 699999999 99998887777543 1123444444322
Q ss_pred EeCC-CceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeE
Q 044635 645 RLRR-DEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVT 723 (831)
Q Consensus 645 ~~~~-~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~ 723 (831)
.... ...+...... +.+.++++..... ...... +...+..+......+.+..+.+. ....+.
T Consensus 90 ~~~~~~~~~~~~~~~------~~~~~~l~~~~~~---------~~~~~~-~~~~~~~~~~~~~~~~l~~l~~~-~~~~~i 152 (271)
T 2x4d_A 90 QILKERGLRPYLLIH------DGVRSEFDQIDTS---------NPNCVV-IADAGESFSYQNMNNAFQVLMEL-EKPVLI 152 (271)
T ss_dssp HHHHHHTCCEEEECC------GGGGGGGTTSCCS---------SCSEEE-ECCCGGGCCHHHHHHHHHHHHHC-SSCCEE
T ss_pred HHHHHcCCEEEEEeC------HHHHHHHHHcCCC---------CCCEEE-EecCCCCcCHHHHHHHHHHHHhc-CCCeEE
Confidence 1100 0000000000 0011111111000 000000 00000000011112222222211 001110
Q ss_pred EEE-----------------------cCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCc-hhHHHHHHcch
Q 044635 724 VKS-----------------------GQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDR-SDEDMFEVIIS 779 (831)
Q Consensus 724 v~~-----------------------g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~-NDe~Mf~~a~~ 779 (831)
+.. .....|+.+.+.+|+.+++.+++++ |++++++++|||+. ||++|++.+|.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l---gi~~~~~i~iGD~~~nDi~~a~~aG~ 229 (271)
T 2x4d_A 153 SLGKGRYYAATSGLMLDVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAI---GVEAHQAVMIGDDIVGDVGGAQRCGM 229 (271)
T ss_dssp EECCCSEEEETTEEEECHHHHHHHHHHHHTCCCEEESTTCHHHHHHHHHHH---TCCGGGEEEEESCTTTTHHHHHHTTC
T ss_pred EEcCCcccccCCCcccChhHHHHHHHHHhCCceeeccCCCHHHHHHHHHHh---CCCcceEEEECCCcHHHHHHHHHCCC
Confidence 000 0112356778899999999999999 99999999999998 99999999986
Q ss_pred hcCCCCCCCCCceEEEEeCCC--------CcccceEeCChhHHHHHHHHHH
Q 044635 780 SMAGPSIAPRAEVFACTVGRK--------PSKAKYYLDDTVEIVRLMQGLA 822 (831)
Q Consensus 780 ~~~~~~~~~~~~~~~v~vG~~--------~s~A~y~l~d~~eV~~~L~~L~ 822 (831)
. +..|..|.. ...|++++++..++.++|..+.
T Consensus 230 ~-----------~~~v~~g~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~ 269 (271)
T 2x4d_A 230 R-----------ALQVRTGKFRPSDEHHPEVKADGYVDNLAEAVDLLLQHA 269 (271)
T ss_dssp E-----------EEEESSTTCCGGGGGCSSCCCSEEESSHHHHHHHHHHHC
T ss_pred c-----------EEEEcCCCCCchhhcccCCCCCEEeCCHHHHHHHHHhhc
Confidence 4 234555521 1348899999999988887654
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=8.3e-12 Score=124.09 Aligned_cols=139 Identities=14% Similarity=0.098 Sum_probs=105.0
Q ss_pred cCceeEEecCCCccCCCCCC---C----CCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEE
Q 044635 571 TTTRAILLDYDGTLMPQASI---D----KSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYF 643 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~~---~----~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~ 643 (831)
.++|+|++|+||||++.... . ..+++++.++|++|.+ .|..++|+|||+...+...+..+.-..++ +|
T Consensus 6 ~~ik~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~-~G~~~~i~Tg~~~~~~~~~~~~lgl~~~~--~~-- 80 (180)
T 1k1e_A 6 ENIKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLMD-ADIQVAVLSGRDSPILRRRIADLGIKLFF--LG-- 80 (180)
T ss_dssp GGCCEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHH-TTCEEEEEESCCCHHHHHHHHHHTCCEEE--ES--
T ss_pred hCCeEEEEeCCCCcCCCCeeeccCcceeeeeccchHHHHHHHHH-CCCeEEEEeCCCcHHHHHHHHHcCCceee--cC--
Confidence 35799999999999983210 1 1356789999999977 59999999999998888877643111111 00
Q ss_pred EEeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeE
Q 044635 644 FRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVT 723 (831)
Q Consensus 644 i~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~ 723 (831)
T Consensus 81 -------------------------------------------------------------------------------- 80 (180)
T 1k1e_A 81 -------------------------------------------------------------------------------- 80 (180)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC---
Q 044635 724 VKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK--- 800 (831)
Q Consensus 724 v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~--- 800 (831)
..+|+.+++.+++.+ |++++++++|||+.||++|++.++ +++.+++.
T Consensus 81 -------------~k~k~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~~~~ag--------------~~~~~~~~~~~ 130 (180)
T 1k1e_A 81 -------------KLEKETACFDLMKQA---GVTAEQTAYIGDDSVDLPAFAACG--------------TSFAVADAPIY 130 (180)
T ss_dssp -------------CSCHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSS--------------EEEECTTSCHH
T ss_pred -------------CCCcHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHcC--------------CeEEeCCccHH
Confidence 057999999999998 899999999999999999999998 45667664
Q ss_pred -CcccceEeCC--hhHHH-HHHHHHHhh
Q 044635 801 -PSKAKYYLDD--TVEIV-RLMQGLACV 824 (831)
Q Consensus 801 -~s~A~y~l~d--~~eV~-~~L~~L~~~ 824 (831)
+..|+|++.+ ..+++ .+++.+...
T Consensus 131 ~~~~ad~v~~~~~~~g~~~~~~~~~l~~ 158 (180)
T 1k1e_A 131 VKNAVDHVLSTHGGKGAFREMSDMILQA 158 (180)
T ss_dssp HHTTSSEECSSCTTTTHHHHHHHHHHHH
T ss_pred HHhhCCEEecCCCCCcHHHHHHHHHHHh
Confidence 3678998864 45677 666666543
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.28 E-value=1.6e-11 Score=129.49 Aligned_cols=215 Identities=15% Similarity=0.135 Sum_probs=123.1
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECC---CCHhhHHHHhCCC----CCceEEecCCEEE
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSA---KSRKTLAEWFSPC----ENLGIAAEHGYFF 644 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG---R~~~~l~~~~~~~----~~~~liaenGa~i 644 (831)
++|+|+||+||||++ .+ .+.+++.++|++|.+ .|..|+++|| |+...+.+.+..+ ....+++.||+..
T Consensus 7 ~~kli~~DlDGTLl~---~~-~~~~~~~~ai~~l~~-~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~~~~ii~~~~~~~ 81 (268)
T 3qgm_A 7 DKKGYIIDIDGVIGK---SV-TPIPEGVEGVKKLKE-LGKKIIFVSNNSTRSRRILLERLRSFGLEVGEDEILVATYATA 81 (268)
T ss_dssp CCSEEEEECBTTTEE---TT-EECHHHHHHHHHHHH-TTCEEEEEECCSSSCHHHHHHHHHHTTCCCCGGGEEEHHHHHH
T ss_pred cCCEEEEcCcCcEEC---CC-EeCcCHHHHHHHHHH-cCCeEEEEeCcCCCCHHHHHHHHHHCCCCCCHHHeeCHHHHHH
Confidence 589999999999998 33 366889999999977 6999999999 6777777666543 1234666666533
Q ss_pred EeC----CCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeE-eeccceEEEeeccCCCccchHHHHHHHHHHHhH---
Q 044635 645 RLR----RDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTI-EDKETALVWSYEDADPDFGSCQAKELLDHLESV--- 716 (831)
Q Consensus 645 ~~~----~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~i-e~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~--- 716 (831)
..- ......... . ..+...+... |..+ ........+.- .+..+......+....+...
T Consensus 82 ~~~~~~~~~~~~~~~~---~----~~l~~~~~~~-----g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~ 147 (268)
T 3qgm_A 82 RFIAREKPNAKVFTTG---E----EGLIEELRLA-----GLEIVDYDEAEYLVVG--SNRKINFELMTKALRACLRGIRY 147 (268)
T ss_dssp HHHHHHSTTCEEEECC---C----HHHHHHHHHT-----TCEECCTTTCSEEEEC--CCTTCBHHHHHHHHHHHHHTCEE
T ss_pred HHHHhhCCCCeEEEEc---C----HHHHHHHHHc-----CCeecCCCCCCEEEEe--cCCCCCHHHHHHHHHHHhCCCcE
Confidence 210 011111000 0 1122222211 1111 11111111110 11111111122222222221
Q ss_pred -hcCCCeEEEEcCe----------------EEEE-EeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCC-chhHHHHHHc
Q 044635 717 -LANEPVTVKSGQN----------------LVEV-KPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDD-RSDEDMFEVI 777 (831)
Q Consensus 717 -l~~~~v~v~~g~~----------------~vEV-~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~-~NDe~Mf~~a 777 (831)
..+.......... ..|. ...+..|+.+++.+++++ |++++++++|||+ .||+.|.+.+
T Consensus 148 i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~~~~~~ 224 (268)
T 3qgm_A 148 IATNPDRIFPAEDGPIPGTGMIIGALYWMTGREPDVVVGKPSEVIMREALDIL---GLDAKDVAVVGDQIDVDVAAGKAI 224 (268)
T ss_dssp EESCCCCEEEETTEEEECTHHHHHHHHHHHSCCCSEECSTTSHHHHHHHHHHH---TCCGGGEEEEESCTTTHHHHHHHH
T ss_pred EEEeCCCcccCCCCceeChHHHHHHHHHHhCCCcceecCCCCHHHHHHHHHHh---CCCchhEEEECCCchHHHHHHHHC
Confidence 0111111111100 1245 667888999999999999 9999999999999 6999999999
Q ss_pred chhcCCCCCCCCCceEEEEeCCCC----c--------ccceEeCChhHHHHHHH
Q 044635 778 ISSMAGPSIAPRAEVFACTVGRKP----S--------KAKYYLDDTVEIVRLMQ 819 (831)
Q Consensus 778 ~~~~~~~~~~~~~~~~~v~vG~~~----s--------~A~y~l~d~~eV~~~L~ 819 (831)
|.. .+.|..|+.. . .|+|++++..++.++|+
T Consensus 225 g~~-----------~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~el~~~l~ 267 (268)
T 3qgm_A 225 GAE-----------TVLVLTGVTTRENLDQMIERHGLKPDYVFNSLKDMVEALE 267 (268)
T ss_dssp TCE-----------EEEESSSSCCTTTHHHHHHHHTCCCSEEESSHHHHHHTC-
T ss_pred CCc-----------EEEECCCCCCHHHHHhhccccCCCCCEEECCHHHHHHHHh
Confidence 852 2456666532 1 68999999999988764
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=1.6e-11 Score=129.62 Aligned_cols=211 Identities=13% Similarity=0.099 Sum_probs=124.5
Q ss_pred cCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEEC---CCCHhhHHHHhCCC----CCceEEecCCEE
Q 044635 571 TTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVS---AKSRKTLAEWFSPC----ENLGIAAEHGYF 643 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~S---GR~~~~l~~~~~~~----~~~~liaenGa~ 643 (831)
.+.+.|++|+||||++ . ..+++.+.++|++|.+ .|..|+++| ||+...+.+.+..+ ....++++||+.
T Consensus 15 ~~~~~v~~DlDGTLl~---~-~~~~~~~~~~l~~l~~-~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~~~~~ii~~~~~~ 89 (271)
T 1vjr_A 15 DKIELFILDMDGTFYL---D-DSLLPGSLEFLETLKE-KNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPDDAVVTSGEIT 89 (271)
T ss_dssp GGCCEEEECCBTTTEE---T-TEECTTHHHHHHHHHH-TTCEEEEEESCTTSCHHHHHHHHHHTTCCCCGGGEEEHHHHH
T ss_pred cCCCEEEEcCcCcEEe---C-CEECcCHHHHHHHHHH-cCCeEEEEECCCCCCHHHHHHHHHHcCCCCChhhEEcHHHHH
Confidence 4678999999999998 3 4577889999999976 599999999 99999888887654 122466666654
Q ss_pred EEeCC----CceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcC
Q 044635 644 FRLRR----DEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLAN 719 (831)
Q Consensus 644 i~~~~----~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~ 719 (831)
+.... ........ . ..+...++.+ |..+............. .......+.+++..+. ..
T Consensus 90 ~~~~~~~~~~~~~~~~~---~----~~~~~~l~~~-----g~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~l~---~~ 152 (271)
T 1vjr_A 90 AEHMLKRFGRCRIFLLG---T----PQLKKVFEAY-----GHVIDEENPDFVVLGFD--KTLTYERLKKACILLR---KG 152 (271)
T ss_dssp HHHHHHHHCSCEEEEES---C----HHHHHHHHHT-----TCEECSSSCSEEEECCC--TTCCHHHHHHHHHHHT---TT
T ss_pred HHHHHHhCCCCeEEEEc---C----HHHHHHHHHc-----CCccCCCCCCEEEEeCC--CCcCHHHHHHHHHHHH---CC
Confidence 32210 01111000 0 1122222221 11111000011111111 1111112223333331 11
Q ss_pred CCeEEEEcC------------------------eEEEE-EeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCC-chhHHH
Q 044635 720 EPVTVKSGQ------------------------NLVEV-KPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDD-RSDEDM 773 (831)
Q Consensus 720 ~~v~v~~g~------------------------~~vEV-~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~-~NDe~M 773 (831)
..+ +.++. ...|. .+.+.+|+.+++.+++.+ |++++++++|||+ .||++|
T Consensus 153 ~~~-i~tn~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l---gi~~~e~i~iGD~~~nDi~~ 228 (271)
T 1vjr_A 153 KFY-IATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKF---GVPKERMAMVGDRLYTDVKL 228 (271)
T ss_dssp CEE-EESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHH---TCCGGGEEEEESCHHHHHHH
T ss_pred CeE-EEECCCccccCCCCccccccHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHh---CCCCceEEEECCCcHHHHHH
Confidence 111 11110 11345 788999999999999999 9999999999999 599999
Q ss_pred HHHcchhcCCCCCCCCCceEEEEeCCCC--------cccceEeCChhHHHHHH
Q 044635 774 FEVIISSMAGPSIAPRAEVFACTVGRKP--------SKAKYYLDDTVEIVRLM 818 (831)
Q Consensus 774 f~~a~~~~~~~~~~~~~~~~~v~vG~~~--------s~A~y~l~d~~eV~~~L 818 (831)
++.+|.. ++.|.-|... ..++|++++..++.++|
T Consensus 229 a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el~~~l 270 (271)
T 1vjr_A 229 GKNAGIV-----------SILVLTGETTPEDLERAETKPDFVFKNLGELAKAV 270 (271)
T ss_dssp HHHHTCE-----------EEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHH
T ss_pred HHHcCCe-----------EEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHh
Confidence 9999863 1233334321 26889999999888765
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=2.8e-11 Score=141.71 Aligned_cols=175 Identities=13% Similarity=0.006 Sum_probs=125.2
Q ss_pred HHHHhccCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccC
Q 044635 330 LIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTF 409 (831)
Q Consensus 330 lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~ 409 (831)
.|++++.++.++++++||+.+ ||++.+|+|+.++++++|+++ |+++|. +++..+ ++++++.+.+
T Consensus 367 ~r~~~~~~~~~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~----l~i~G~----~g~~~~----~l~~~~~~~~--- 430 (568)
T 2vsy_A 367 SRTQCGLPEQGVVLCCFNNSY-KLNPQSMARMLAVLREVPDSV----LWLLSG----PGEADA----RLRAFAHAQG--- 430 (568)
T ss_dssp CTGGGTCCTTSCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCE----EEEECC----STTHHH----HHHHHHHHTT---
T ss_pred CccccCCCCCCEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcE----EEEecC----CHHHHH----HHHHHHHHcC---
Confidence 455666234456779999999 999999999999999999876 888883 334433 4444444422
Q ss_pred CCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCC---CCCCC-CceEEE-------eccc-------ccccccC
Q 044635 410 GKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSE---PSSPK-KSMLVV-------SEFI-------GCSPSLS 471 (831)
Q Consensus 410 g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma---~~~~~-~g~lVl-------Se~~-------G~~~~l~ 471 (831)
.. ...|+ |.|.++.+++..+|+.||+||+||.+ |+. .+++. +.|+|+ |..+ |+.+.+.
T Consensus 431 -l~-~~~v~-~~g~~~~~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~ 506 (568)
T 2vsy_A 431 -VD-AQRLV-FMPKLPHPQYLARYRHADLFLDTHPY-NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNV 506 (568)
T ss_dssp -CC-GGGEE-EECCCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBC
T ss_pred -CC-hhHEE-eeCCCCHHHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhhc
Confidence 11 01354 56789999999999999999999999 882 12222 446666 6666 6555443
Q ss_pred CCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhh---ccCCHHHHHHHHHHHHHHHHHH
Q 044635 472 GAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYV---STHDVGYWARSFLQDLERTCRE 532 (831)
Q Consensus 472 ~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v---~~~~~~~W~~~~l~~l~~~~~~ 532 (831)
+ |+++++++|.++++.+ +.+....++.++.+ ..+++..+++++.+-+.+..+.
T Consensus 507 ~-------~~~~la~~i~~l~~~~-~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~~~ 562 (568)
T 2vsy_A 507 A-------DDAAFVAKAVALASDP-AALTALHARVDVLRRASGVFHMDGFADDFGALLQALARR 562 (568)
T ss_dssp S-------SHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHT
T ss_pred C-------CHHHHHHHHHHHhcCH-HHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2 8999999999999844 44555555667776 6789999999988888776654
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=8.1e-11 Score=129.34 Aligned_cols=250 Identities=12% Similarity=0.012 Sum_probs=152.4
Q ss_pred HHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHH
Q 044635 195 MEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLS 274 (831)
Q Consensus 195 ~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~ 274 (831)
++..+| |+|++|..... ++..+..+..++|+.+..|..+|..- ..++. -.+|.+...+...
T Consensus 92 l~~~~p--Dvv~~~~~~~~-~~~~~~~~~~~~p~v~~~~~~~~~~~--------~~~~~--~~~d~v~~~~~~~------ 152 (364)
T 1f0k_A 92 MKAYKP--DVVLGMGGYVS-GPGGLAAWSLGIPVVLHEQNGIAGLT--------NKWLA--KIATKVMQAFPGA------ 152 (364)
T ss_dssp HHHHCC--SEEEECSSTTH-HHHHHHHHHTTCCEEEEECSSSCCHH--------HHHHT--TTCSEEEESSTTS------
T ss_pred HHhcCC--CEEEEeCCcCc-hHHHHHHHHcCCCEEEEecCCCCcHH--------HHHHH--HhCCEEEecChhh------
Confidence 344566 89999865432 33444344457888888887665310 11110 1244443222110
Q ss_pred HHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcE-EEEeccCccccc
Q 044635 275 CCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKV-MLLGVDDMDIFK 352 (831)
Q Consensus 275 ~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~-iil~VdRld~~K 352 (831)
+ . ++.++|+|+|...+.. +. .+++++ ..+++ +++++||+.+.|
T Consensus 153 --------------------~-~---~~~~i~n~v~~~~~~~----~~-------~~~~~~~~~~~~~il~~~g~~~~~k 197 (364)
T 1f0k_A 153 --------------------F-P---NAEVVGNPVRTDVLAL----PL-------PQQRLAGREGPVRVLVVGGSQGARI 197 (364)
T ss_dssp --------------------S-S---SCEECCCCCCHHHHTS----CC-------HHHHHTTCCSSEEEEEECTTTCCHH
T ss_pred --------------------c-C---CceEeCCccchhhccc----ch-------hhhhcccCCCCcEEEEEcCchHhHH
Confidence 1 1 3557899999876632 11 123443 34444 666778999999
Q ss_pred CHHHHHHHHHHHHHhCCCCCCcEEE-EEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHH
Q 044635 353 GISLKLLAMEQLLIQHPEWQGKVVL-VQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIA 431 (831)
Q Consensus 353 Gi~~~l~A~~~lL~~~P~~~~~vvL-vqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~a 431 (831)
|++.+++|++++.+ ++.+ +++| +++ .++++ +++.+.+ ...|.+ .+.+ +++..
T Consensus 198 ~~~~li~a~~~l~~-------~~~~l~i~G-----~~~-~~~l~----~~~~~~~-------~~~v~~-~g~~--~~~~~ 250 (364)
T 1f0k_A 198 LNQTMPQVAAKLGD-------SVTIWHQSG-----KGS-QQSVE----QAYAEAG-------QPQHKV-TEFI--DDMAA 250 (364)
T ss_dssp HHHHHHHHHHHHGG-------GEEEEEECC-----TTC-HHHHH----HHHHHTT-------CTTSEE-ESCC--SCHHH
T ss_pred HHHHHHHHHHHhcC-------CcEEEEEcC-----Cch-HHHHH----HHHhhcC-------CCceEE-ecch--hhHHH
Confidence 99999999998743 2444 4444 222 23333 3443322 113554 4555 68999
Q ss_pred HHHHcCEeEECCC----ccCCCCCCCCCceEEEecccccc-------ccc---CCCceeCCCC--HHHHHHHHHHHhcCC
Q 044635 432 YYVVAECCLVTAV----RDGSEPSSPKKSMLVVSEFIGCS-------PSL---SGAIRVNPWN--IDAVSDAMDSALEMA 495 (831)
Q Consensus 432 ly~~ADv~vvtS~----~eGma~~~~~~g~lVlSe~~G~~-------~~l---~~allVnP~d--~~~~A~ai~~aL~m~ 495 (831)
+|+.||++|+||- .|.|++ +.|+|++...|.. +.+ ..|++++|.| ++++|++|.++ +
T Consensus 251 ~~~~ad~~v~~sg~~~~~EAma~----G~Pvi~~~~~g~~~~q~~~~~~~~~~g~g~~~~~~d~~~~~la~~i~~l---~ 323 (364)
T 1f0k_A 251 AYAWADVVVCRSGALTVSEIAAA----GLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW---S 323 (364)
T ss_dssp HHHHCSEEEECCCHHHHHHHHHH----TCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC---C
T ss_pred HHHhCCEEEECCchHHHHHHHHh----CCCEEEeeCCCCchhHHHHHHHHHhCCcEEEeccccCCHHHHHHHHHhc---C
Confidence 9999999999984 233445 5688888877652 234 3589999988 99999999887 4
Q ss_pred HHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHH
Q 044635 496 DQEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRE 532 (831)
Q Consensus 496 ~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~ 532 (831)
++.+....+..++++..+++..-++.+.+-+++..+.
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~ 360 (364)
T 1f0k_A 324 RETLLTMAERARAASIPDATERVANEVSRVARALEHH 360 (364)
T ss_dssp HHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHhh
Confidence 5666666667777777777777777766665554443
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=99.24 E-value=2.9e-14 Score=156.14 Aligned_cols=210 Identities=15% Similarity=0.041 Sum_probs=115.9
Q ss_pred HhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCH---hhHH---HHh--CCCC-CceEEec
Q 044635 569 KRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSR---KTLA---EWF--SPCE-NLGIAAE 639 (831)
Q Consensus 569 ~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~---~~l~---~~~--~~~~-~~~liae 639 (831)
...++|+|+||+||||++. +. . ++|.++.. .+..++++|||+. ..+. .++ ..+. ..++++.
T Consensus 17 ~~~~~kli~fDlDGTLld~---~~-----~-~~l~~~~~-~g~~~~~~tGR~~~~~~~~~~~~~~~~~~~l~~~~~~i~~ 86 (332)
T 1y8a_A 17 LYFQGHMFFTDWEGPWILT---DF-----A-LELCMAVF-NNARFFSNLSEYDDYLAYEVRREGYEAGYTLKLLTPFLAA 86 (332)
T ss_dssp ---CCCEEEECSBTTTBCC---CH-----H-HHHHHHHH-CCHHHHHHHHHHHHHHHHTTCCTTCCTTTHHHHHHHHHHH
T ss_pred hCCCceEEEEECcCCCcCc---cH-----H-HHHHHHHH-CCCEEEEEcCCCchhhhhhhhccCeechhhcCCcCeEEEc
Confidence 3446799999999999983 22 1 67777765 4788999999998 5554 444 3221 2347888
Q ss_pred CCEEEEeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEe-ecc----------ceE--EEeeccCCCc-c--ch
Q 044635 640 HGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIE-DKE----------TAL--VWSYEDADPD-F--GS 703 (831)
Q Consensus 640 nGa~i~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie-~k~----------~~l--~~~~~~~d~~-~--~~ 703 (831)
||+.++..+ ..+..... .++.+.++++.+.+ .-...+. .+. ..+ .+.....+.+ + ..
T Consensus 87 nGa~i~~~~-~~~~~~~~-----~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (332)
T 1y8a_A 87 AGVKNRDVE-RIAELSAK-----FVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGELHGTEVDFDSIAVPE 159 (332)
T ss_dssp TTCCHHHHH-HHHHHHCC-----BCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEEEEEBCCGGGCCCCH
T ss_pred CCcEEEECC-eEeeccCC-----CHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhhcccccchhhhcccc
Confidence 999876321 11111011 12335555555543 1111111 110 000 0000000000 0 00
Q ss_pred HHH--------HHHH----HHHHhHhcCCCeEEE-Ec-CeEEE--EEeCCCCHHHHHHHHHHHhhhcCCCccc----EEE
Q 044635 704 CQA--------KELL----DHLESVLANEPVTVK-SG-QNLVE--VKPQGVNKGLVAKRLLSTMQEREMLPDF----VLC 763 (831)
Q Consensus 704 ~~a--------~el~----~~L~~~l~~~~v~v~-~g-~~~vE--V~p~gvnKG~al~~Ll~~l~~~g~~~d~----vla 763 (831)
... ..+. +.+ +.+.+ + +. ++ ..++| +.|.+++||.+++.+ ++++ +++
T Consensus 160 ~~~k~~~~~~~~~~~~~~~~~l-~~~~~--~-~~~s~~~~~~e~ii~~~g~~K~~al~gi---------~~~~~~~~via 226 (332)
T 1y8a_A 160 GLREELLSIIDVIASLSGEELF-RKLDE--L-FSRSEVRKIVESVKAVGAGEKAKIMRGY---------CESKGIDFPVV 226 (332)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHH-HHHHH--H-HHSHHHHHHHHTCBCCCHHHHHHHHHHH---------HHHHTCSSCEE
T ss_pred ccceeEEecCHHHHhhhhHHHH-HHHHH--H-HhhcCCCceeeEEecCCCCCHHHHHhcc---------ChhhcCceEEE
Confidence 000 0000 111 11111 1 11 11 22445 889999999999833 3455 999
Q ss_pred EcCCchhHHHHHHc----chhcCCCCCCCCCceEEEEeCCC----CcccceEeC--ChhHHHHHHHHHHh
Q 044635 764 VGDDRSDEDMFEVI----ISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLD--DTVEIVRLMQGLAC 823 (831)
Q Consensus 764 ~GD~~NDe~Mf~~a----~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~--d~~eV~~~L~~L~~ 823 (831)
|||+.||++||+.+ + ++|+| ++ +..|+|++. +.++|+++|+.+..
T Consensus 227 ~GDs~NDi~ml~~A~~~~g--------------~~vam-na~~~lk~~Ad~v~~~~~~dGV~~~l~~~~~ 281 (332)
T 1y8a_A 227 VGDSISDYKMFEAARGLGG--------------VAIAF-NGNEYALKHADVVIISPTAMSEAKVIELFME 281 (332)
T ss_dssp EECSGGGHHHHHHHHHTTC--------------EEEEE-SCCHHHHTTCSEEEECSSTHHHHHHHHHHHH
T ss_pred EeCcHhHHHHHHHHhhcCC--------------eEEEe-cCCHHHHhhCcEEecCCCCCHHHHHHHHHHH
Confidence 99999999999999 7 45667 54 467999884 58999999998764
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.21 E-value=6.8e-11 Score=124.64 Aligned_cols=210 Identities=13% Similarity=0.069 Sum_probs=119.5
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEEC---CCCHhhHHHHhCCC----CCceEEecCCEEE
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVS---AKSRKTLAEWFSPC----ENLGIAAEHGYFF 644 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~S---GR~~~~l~~~~~~~----~~~~liaenGa~i 644 (831)
++|+|+||+||||++ .++.+ +++.++|+++.+ .|..|+++| ||+...+...+..+ ....+++.||+.+
T Consensus 4 ~~kli~~DlDGTLl~---~~~~i-~~~~eal~~l~~-~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~~~ii~~~~~~~ 78 (264)
T 3epr_A 4 AYKGYLIDLDGTIYK---GKSRI-PAGERFIERLQE-KGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYTATMATV 78 (264)
T ss_dssp CCCEEEECCBTTTEE---TTEEC-HHHHHHHHHHHH-HTCCEEEEECCCSSCHHHHHHHHHTTTCCCCGGGEEEHHHHHH
T ss_pred CCCEEEEeCCCceEe---CCEEC-cCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhheecHHHHHH
Confidence 579999999999999 66777 899999999987 499999999 88888888887754 1234666666543
Q ss_pred EeCC----CceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHh---
Q 044635 645 RLRR----DEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVL--- 717 (831)
Q Consensus 645 ~~~~----~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l--- 717 (831)
..-. ........ . +.+...++.+ |..+........+.. .+..+......+....+....
T Consensus 79 ~~l~~~~~~~~~~~~~---~----~~l~~~l~~~-----g~~~~~~~~~~v~~~--~~~~~~~~~~~~~~~~l~~~~~~i 144 (264)
T 3epr_A 79 DYMNDMNRGKTAYVIG---E----EGLKKAIADA-----GYVEDTKNPAYVVVG--LDWNVTYDKLATATLAIQNGALFI 144 (264)
T ss_dssp HHHHHHTCCSEEEEES---C----HHHHHHHHHT-----TCEECSSSCSEEEEC--CCTTCCHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHhCCCCeEEEEC---C----HHHHHHHHHc-----CCcccCCcCCEEEEe--CCCCCCHHHHHHHHHHHHCCCeEE
Confidence 2210 01111000 0 1222233221 111211111111111 111111112222222232110
Q ss_pred -cCCCeEEEEcCe----------------EEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCC-chhHHHHHHcch
Q 044635 718 -ANEPVTVKSGQN----------------LVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDD-RSDEDMFEVIIS 779 (831)
Q Consensus 718 -~~~~v~v~~g~~----------------~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~-~NDe~Mf~~a~~ 779 (831)
.+.......... ..|....+-.|+.+++.+++++ |++++++++|||+ .||+.|.+.+|.
T Consensus 145 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~~a~~aG~ 221 (264)
T 3epr_A 145 GTNPDLNIPTERGLLPGAGSLNALLEAATRIKPVFIGKPNAIIMNKALEIL---NIPRNQAVMVGDNYLTDIMAGINNDI 221 (264)
T ss_dssp ESCCCSEEEETTEEEECHHHHHHHHHHHHSCCCEECSTTSHHHHHHHHHHH---TSCGGGEEEEESCTTTHHHHHHHHTC
T ss_pred EEcCCccccCCCceecCccHHHHHHHHHhCCCcccCCCCCHHHHHHHHHHh---CcCcccEEEECCCcHHHHHHHHHCCC
Confidence 011100011111 1234455667788899999999 9999999999999 799999999985
Q ss_pred hcCCCCCCCCCceEEEEeCCCC------c--ccceEeCChhHH
Q 044635 780 SMAGPSIAPRAEVFACTVGRKP------S--KAKYYLDDTVEI 814 (831)
Q Consensus 780 ~~~~~~~~~~~~~~~v~vG~~~------s--~A~y~l~d~~eV 814 (831)
. .+.|..|... . .++|++++..++
T Consensus 222 ~-----------~~~v~~g~~~~~~~~~~~~~pd~~~~~l~~l 253 (264)
T 3epr_A 222 D-----------TLLVTTGFTTVEEVPDLPIQPSYVLASLDEW 253 (264)
T ss_dssp E-----------EEEETTSSSCGGGGGGCSSCCSEEESCGGGC
T ss_pred e-----------EEEECCCCCChHHHHhcCCCCCEEECCHHHH
Confidence 2 2344444321 1 688888887664
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.19 E-value=6.7e-12 Score=129.37 Aligned_cols=70 Identities=16% Similarity=0.094 Sum_probs=58.1
Q ss_pred EEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCC-chhHHHHHHcchhcCCCCCCCCCceEEEEeCCCC--------
Q 044635 731 VEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDD-RSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKP-------- 801 (831)
Q Consensus 731 vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~-~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~-------- 801 (831)
.|+.+.+.+|+.+++++++++ |++++++++|||+ .||++|++.+|.. +..|..|+..
T Consensus 169 ~~~~~~~kpk~~~~~~~~~~l---gi~~~~~i~iGD~~~nDi~~~~~aG~~-----------~~~v~~g~~~~~~~~~~~ 234 (250)
T 2c4n_A 169 RKPFYVGKPSPWIIRAALNKM---QAHSEETVIVGDNLRTDILAGFQAGLE-----------TILVLSGVSSLDDIDSMP 234 (250)
T ss_dssp CCCEECSTTSTHHHHHHHHHH---TCCGGGEEEEESCTTTHHHHHHHTTCE-----------EEEESSSSCCGGGGSSCS
T ss_pred CCceEeCCCCHHHHHHHHHHc---CCCcceEEEECCCchhHHHHHHHcCCe-----------EEEECCCCCChhhhhhcC
Confidence 466789999999999999999 9999999999999 7999999999864 2445566432
Q ss_pred cccceEeCChhHH
Q 044635 802 SKAKYYLDDTVEI 814 (831)
Q Consensus 802 s~A~y~l~d~~eV 814 (831)
..|+|++++..++
T Consensus 235 ~~~~~v~~~~~el 247 (250)
T 2c4n_A 235 FRPSWIYPSVAEI 247 (250)
T ss_dssp SCCSEEESSGGGC
T ss_pred CCCCEEECCHHHh
Confidence 4688999887765
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.8e-09 Score=121.00 Aligned_cols=252 Identities=18% Similarity=0.149 Sum_probs=152.1
Q ss_pred HHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHH--hcCCeEeecCHHhHHH
Q 044635 194 IMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRAL--LNSDLIGFHTFDYARH 271 (831)
Q Consensus 194 i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~l--l~~dligf~t~~~~~~ 271 (831)
+.+..+| |+|.+|+.-...+|..+..+..++|++. +|.+..+...+. |+.+++.+-+ -.+|++-..+....++
T Consensus 106 ~l~~~kP--DvVi~~g~~~~~~~~~~aa~~~~IPv~h-~~ag~rs~~~~~--~~~~~~~r~~~~~~a~~~~~~se~~~~~ 180 (396)
T 3dzc_A 106 VLSSEQP--DVVLVHGDTATTFAASLAAYYQQIPVGH-VEAGLRTGNIYS--PWPEEGNRKLTAALTQYHFAPTDTSRAN 180 (396)
T ss_dssp HHHHHCC--SEEEEETTSHHHHHHHHHHHTTTCCEEE-ETCCCCCSCTTS--STTHHHHHHHHHHTCSEEEESSHHHHHH
T ss_pred HHHhcCC--CEEEEECCchhHHHHHHHHHHhCCCEEE-EECCcccccccc--CCcHHHHHHHHHHhcCEEECCCHHHHHH
Confidence 3455577 8999998777767766666666888763 344443333322 4556666665 3579998899888887
Q ss_pred HHHHHHHHhCCeecccCceeeEEEcCEEEEEEEee-cccChHHHHHhhCCcchHHHHHHHHHHhcc--CCc-EEEEeccC
Q 044635 272 FLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILP-VGIHMGQLQSVLSLPGTEAKVSELIKQFHD--QGK-VMLLGVDD 347 (831)
Q Consensus 272 Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P-~GId~~~~~~~~~~~~~~~~~~~lr~~~~~--~~~-~iil~VdR 347 (831)
|.. .|+.. .+|.+.+ +++|...+..... ........+++++++. .++ .+++..+|
T Consensus 181 l~~-----~G~~~---------------~ki~vvGn~~~d~~~~~~~~~-~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR 239 (396)
T 3dzc_A 181 LLQ-----ENYNA---------------ENIFVTGNTVIDALLAVREKI-HTDMDLQATLESQFPMLDASKKLILVTGHR 239 (396)
T ss_dssp HHH-----TTCCG---------------GGEEECCCHHHHHHHHHHHHH-HHCHHHHHHHHHTCTTCCTTSEEEEEECSC
T ss_pred HHH-----cCCCc---------------CcEEEECCcHHHHHHHhhhhc-ccchhhHHHHHHHhCccCCCCCEEEEEECC
Confidence 764 24321 1233333 3555433321100 0000113567778751 334 45566778
Q ss_pred ccc-ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCH
Q 044635 348 MDI-FKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKF 426 (831)
Q Consensus 348 ld~-~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~ 426 (831)
... .||+..+++|+.++.+++|+++ +|.++.+ ++ .+++.++++. +. ...|.+ .++++.
T Consensus 240 ~~~~~~~~~~ll~A~~~l~~~~~~~~----~v~~~g~----~~---~~~~~l~~~~-------~~--~~~v~~-~~~lg~ 298 (396)
T 3dzc_A 240 RESFGGGFERICQALITTAEQHPECQ----ILYPVHL----NP---NVREPVNKLL-------KG--VSNIVL-IEPQQY 298 (396)
T ss_dssp BCCCTTHHHHHHHHHHHHHHHCTTEE----EEEECCB----CH---HHHHHHHHHT-------TT--CTTEEE-ECCCCH
T ss_pred cccchhHHHHHHHHHHHHHHhCCCce----EEEEeCC----Ch---HHHHHHHHHH-------cC--CCCEEE-eCCCCH
Confidence 653 4889999999999999999754 5554322 12 2344444431 11 124554 457888
Q ss_pred HHHHHHHHHcCEeEECCCccCCCCCCCC-CceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCC
Q 044635 427 YERIAYYVVAECCLVTAVRDGSEPSSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMA 495 (831)
Q Consensus 427 ~el~aly~~ADv~vvtS~~eGma~~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~ 495 (831)
.++..+|+.||++|.+|- |...++.. +.|+|++...|..+++ ..+++|.+ |+++++++|.++|..+
T Consensus 299 ~~~~~l~~~ad~vv~~SG--g~~~EA~a~G~PvV~~~~~~~~~e~v~~G~~~lv~~-d~~~l~~ai~~ll~d~ 368 (396)
T 3dzc_A 299 LPFVYLMDRAHIILTDSG--GIQEEAPSLGKPVLVMRETTERPEAVAAGTVKLVGT-NQQQICDALSLLLTDP 368 (396)
T ss_dssp HHHHHHHHHCSEEEESCS--GGGTTGGGGTCCEEECCSSCSCHHHHHHTSEEECTT-CHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHhcCEEEECCc--cHHHHHHHcCCCEEEccCCCcchHHHHcCceEEcCC-CHHHHHHHHHHHHcCH
Confidence 999999999999999982 44333333 3466666333433444 34566655 8999999999999743
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.12 E-value=6.1e-10 Score=109.44 Aligned_cols=68 Identities=13% Similarity=0.108 Sum_probs=55.1
Q ss_pred CHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEeCC--hh
Q 044635 739 NKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLDD--TV 812 (831)
Q Consensus 739 nKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~d--~~ 812 (831)
+|+.+++.+++++ |++++++++|||+.||++|++.++ ++++|++. +..|+|++.+ .+
T Consensus 83 ~K~~~l~~~~~~~---gi~~~~~~~vGD~~nDi~~~~~ag--------------~~~a~~na~~~~k~~Ad~v~~~~~~~ 145 (168)
T 3ewi_A 83 DKLATVDEWRKEM---GLCWKEVAYLGNEVSDEECLKRVG--------------LSAVPADACSGAQKAVGYICKCSGGR 145 (168)
T ss_dssp CHHHHHHHHHHHT---TCCGGGEEEECCSGGGHHHHHHSS--------------EEEECTTCCHHHHTTCSEECSSCTTT
T ss_pred ChHHHHHHHHHHc---CcChHHEEEEeCCHhHHHHHHHCC--------------CEEEeCChhHHHHHhCCEEeCCCCCc
Confidence 4999999999998 999999999999999999999998 56778775 5789999853 45
Q ss_pred H-HHHHHHHHHh
Q 044635 813 E-IVRLMQGLAC 823 (831)
Q Consensus 813 e-V~~~L~~L~~ 823 (831)
+ +.++++.+..
T Consensus 146 G~~~~~~~~il~ 157 (168)
T 3ewi_A 146 GAIREFAEHIFL 157 (168)
T ss_dssp THHHHHHHHHHH
T ss_pred cHHHHHHHHHHH
Confidence 5 4445555543
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.11 E-value=2.3e-10 Score=111.10 Aligned_cols=138 Identities=13% Similarity=0.094 Sum_probs=101.0
Q ss_pred cCceeEEecCCCccCCCCC---CC----CCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEE
Q 044635 571 TTTRAILLDYDGTLMPQAS---ID----KSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYF 643 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~---~~----~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~ 643 (831)
.+.|+|++|+||||++... .. ...++.+.++|+.|.+ .|..++|+||++...+..++..+.-..++.
T Consensus 7 ~~~k~v~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~----- 80 (162)
T 2p9j_A 7 KKLKLLIMDIDGVLTDGKLYYTEHGETIKVFNVLDGIGIKLLQK-MGITLAVISGRDSAPLITRLKELGVEEIYT----- 80 (162)
T ss_dssp HHCCEEEECCTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHT-TTCEEEEEESCCCHHHHHHHHHTTCCEEEE-----
T ss_pred cceeEEEEecCcceECCceeecCCCceeeeecccHHHHHHHHHH-CCCEEEEEeCCCcHHHHHHHHHcCCHhhcc-----
Confidence 3579999999999997321 01 2246788999999976 599999999999988888876542111100
Q ss_pred EEeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeE
Q 044635 644 FRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVT 723 (831)
Q Consensus 644 i~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~ 723 (831)
T Consensus 81 -------------------------------------------------------------------------------- 80 (162)
T 2p9j_A 81 -------------------------------------------------------------------------------- 80 (162)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC---
Q 044635 724 VKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK--- 800 (831)
Q Consensus 724 v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~--- 800 (831)
.+..|..+++.+++.+ +++++++++|||+.||+.|++.+|. .+.+++.
T Consensus 81 ------------~~kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~ag~--------------~~~~~~~~~~ 131 (162)
T 2p9j_A 81 ------------GSYKKLEIYEKIKEKY---SLKDEEIGFIGDDVVDIEVMKKVGF--------------PVAVRNAVEE 131 (162)
T ss_dssp ------------CC--CHHHHHHHHHHT---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTSCHH
T ss_pred ------------CCCCCHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCC--------------eEEecCccHH
Confidence 0346889999999988 8999999999999999999999984 4455543
Q ss_pred -CcccceEeCChh--HHH-HHHHHHHh
Q 044635 801 -PSKAKYYLDDTV--EIV-RLMQGLAC 823 (831)
Q Consensus 801 -~s~A~y~l~d~~--eV~-~~L~~L~~ 823 (831)
...|+|++++.+ +++ ++++.+.+
T Consensus 132 ~~~~a~~v~~~~~~~g~~~~~~~~~~~ 158 (162)
T 2p9j_A 132 VRKVAVYITQRNGGEGALREVAELIHF 158 (162)
T ss_dssp HHHHCSEECSSCSSSSHHHHHHHHHHH
T ss_pred HHhhCCEEecCCCCCcHHHHHHHHHHH
Confidence 246899987643 444 67777654
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.11 E-value=1e-10 Score=115.87 Aligned_cols=67 Identities=21% Similarity=0.246 Sum_probs=54.3
Q ss_pred CCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEeCC--h
Q 044635 738 VNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLDD--T 811 (831)
Q Consensus 738 vnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~d--~ 811 (831)
.+|+.+++++++.+ |++++++++|||+.||++|++.++ +++++|+. +..|++++.+ .
T Consensus 85 ~~k~~~l~~~~~~~---~~~~~~~~~vGD~~nD~~~~~~ag--------------~~v~~~~~~~~~~~~ad~v~~~~~~ 147 (176)
T 3mmz_A 85 DRKDLALKQWCEEQ---GIAPERVLYVGNDVNDLPCFALVG--------------WPVAVASAHDVVRGAARAVTTVPGG 147 (176)
T ss_dssp SCHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSS--------------EEEECTTCCHHHHHHSSEECSSCTT
T ss_pred CChHHHHHHHHHHc---CCCHHHEEEEcCCHHHHHHHHHCC--------------CeEECCChhHHHHHhCCEEecCCCC
Confidence 67999999999998 999999999999999999999997 56778765 3578888854 4
Q ss_pred hHHHHHHHHH
Q 044635 812 VEIVRLMQGL 821 (831)
Q Consensus 812 ~eV~~~L~~L 821 (831)
+++++.+..+
T Consensus 148 ~g~~~~l~~~ 157 (176)
T 3mmz_A 148 DGAIREIASW 157 (176)
T ss_dssp TTHHHHHHHH
T ss_pred CcHHHHHHHH
Confidence 5555544443
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=6.4e-10 Score=123.67 Aligned_cols=244 Identities=10% Similarity=-0.013 Sum_probs=141.6
Q ss_pred HHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHH-HHhcCCeEeecCHHhHHHH
Q 044635 194 IMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILR-ALLNSDLIGFHTFDYARHF 272 (831)
Q Consensus 194 i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~-~ll~~dligf~t~~~~~~F 272 (831)
+++.++| |+|.++.++++. .++..... |+.+..+. +.... +.+ .+-.+|.|-+++....+.|
T Consensus 106 ~l~~~~p--Div~~~~~~~~~--~~~~~~~~--p~~~~~~~-~~~~~----------~~~~~~~~~d~ii~~S~~~~~~l 168 (374)
T 2xci_A 106 FEELSKP--KALIVVEREFWP--SLIIFTKV--PKILVNAY-AKGSL----------IEKILSKKFDLIIMRTQEDVEKF 168 (374)
T ss_dssp HHHHHCC--SEEEEESCCCCH--HHHHHCCS--CEEEEEEC-CCCCH----------HHHHHHTTCSEEEESCHHHHHHH
T ss_pred HHHHhCC--CEEEEECccCcH--HHHHHHhC--CEEEEEee-cCchH----------HHHHHHHhCCEEEECCHHHHHHH
Confidence 4455677 798888887764 44432221 55444332 21111 222 2335899999999887766
Q ss_pred HHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCccccc
Q 044635 273 LSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFK 352 (831)
Q Consensus 273 l~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~K 352 (831)
.. +|. . +|.++|+|. |... .+. ++.+ . +++++++++ ..|
T Consensus 169 ~~-----~g~----------------~-ki~vi~n~~----f~~~--~~~--------~~~l--~-~~vi~~~~~--~~k 207 (374)
T 2xci_A 169 KT-----FGA----------------K-RVFSCGNLK----FICQ--KGK--------GIKL--K-GEFIVAGSI--HTG 207 (374)
T ss_dssp HT-----TTC----------------C-SEEECCCGG----GCCC--CCS--------CCCC--S-SCEEEEEEE--CGG
T ss_pred HH-----cCC----------------C-eEEEcCCCc----cCCC--cCh--------hhhh--c-CCEEEEEeC--CCc
Confidence 42 121 1 455667652 2110 000 0112 2 257777776 468
Q ss_pred CHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCC--CCCCccEEEecCCCCHHHHH
Q 044635 353 GISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFG--KPGYDPVVLIDEPLKFYERI 430 (831)
Q Consensus 353 Gi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g--~~~~~pv~~~~~~v~~~el~ 430 (831)
|+..+|+||.++.+++|+++ |+++| ++++.. +++++++.+.+-.+. ..+...| ++.+. .+|+.
T Consensus 208 ~~~~ll~A~~~l~~~~p~~~----lvivG-----~g~~~~---~~l~~~~~~~gl~~~~~~~~~~~v-~~~~~--~~dl~ 272 (374)
T 2xci_A 208 EVEIILKAFKEIKKTYSSLK----LILVP-----RHIENA---KIFEKKARDFGFKTSFFENLEGDV-ILVDR--FGILK 272 (374)
T ss_dssp GHHHHHHHHHHHHTTCTTCE----EEEEE-----SSGGGH---HHHHHHHHHTTCCEEETTCCCSSE-EECCS--SSCHH
T ss_pred hHHHHHHHHHHHHhhCCCcE----EEEEC-----CCHHHH---HHHHHHHHHCCCceEEecCCCCcE-EEECC--HHHHH
Confidence 99999999999998899877 88888 344431 233444444332110 0000124 44443 46899
Q ss_pred HHHHHcCEeEECCC-ccCC--C-CCCCCCc-eEEEe-ccccccccc----CCCceeCCCCHHHHHHHHHHHhcCCHHHHH
Q 044635 431 AYYVVAECCLVTAV-RDGS--E-PSSPKKS-MLVVS-EFIGCSPSL----SGAIRVNPWNIDAVSDAMDSALEMADQEKQ 500 (831)
Q Consensus 431 aly~~ADv~vvtS~-~eGm--a-~~~~~~g-~lVlS-e~~G~~~~l----~~allVnP~d~~~~A~ai~~aL~m~~~er~ 500 (831)
.+|+.||+++++|. .|++ + .+++..| |+|.+ ...|+.+.+ .+|.++.|.|++++|++|.++|+. +.++
T Consensus 273 ~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~G~l~~~~d~~~La~ai~~ll~d--~~r~ 350 (374)
T 2xci_A 273 ELYPVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGFEVKNETELVTKLTELLSV--KKEI 350 (374)
T ss_dssp HHGGGEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHTTCEEECCSHHHHHHHHHHHHHS--CCCC
T ss_pred HHHHhCCEEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHCCCEEEeCCHHHHHHHHHHHHhH--HHHH
Confidence 99999999888764 4532 1 1333345 45544 444555433 468899999999999999999984 4444
Q ss_pred HHHHHHhhhhcc
Q 044635 501 LRHEKHYRYVST 512 (831)
Q Consensus 501 ~r~~~~~~~v~~ 512 (831)
...++.++++.+
T Consensus 351 ~mg~~ar~~~~~ 362 (374)
T 2xci_A 351 KVEEKSREIKGC 362 (374)
T ss_dssp CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 444555555543
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=3.9e-10 Score=112.83 Aligned_cols=144 Identities=19% Similarity=0.159 Sum_probs=103.2
Q ss_pred HHhcCceeEEecCCCccCCCCC---CCC----CCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecC
Q 044635 568 YKRTTTRAILLDYDGTLMPQAS---IDK----SPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEH 640 (831)
Q Consensus 568 y~~s~~rli~~D~DGTLl~~~~---~~~----~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaen 640 (831)
++..+.|+|++|+||||++... ... ........+|+.|.+ .|..++|+||++...+..++..+.-..+.
T Consensus 21 ~~~~~ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~~-~g~~v~ivT~~~~~~~~~~l~~lgl~~~~--- 96 (188)
T 2r8e_A 21 AKAENIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGYGIRCALT-SDIEVAIITGRKAKLVEDRCATLGITHLY--- 96 (188)
T ss_dssp HHHHTCSEEEECCCCCCBCSEEEEETTSCEEEEEEHHHHHHHHHHHT-TTCEEEEECSSCCHHHHHHHHHHTCCEEE---
T ss_pred HHHhcCCEEEEeCCCCcCCCCEEecCCCcEEEEeecccHHHHHHHHH-CCCeEEEEeCCChHHHHHHHHHcCCceee---
Confidence 3556889999999999997211 011 112333457888876 59999999999988887777543111110
Q ss_pred CEEEEeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCC
Q 044635 641 GYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANE 720 (831)
Q Consensus 641 Ga~i~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~ 720 (831)
T Consensus 97 -------------------------------------------------------------------------------- 96 (188)
T 2r8e_A 97 -------------------------------------------------------------------------------- 96 (188)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC
Q 044635 721 PVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK 800 (831)
Q Consensus 721 ~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~ 800 (831)
+.+..|+.+++++++.+ |++++++++|||+.||++|++.+|. ++.+++.
T Consensus 97 --------------~~~kpk~~~~~~~~~~~---g~~~~~~~~iGD~~~Di~~a~~ag~--------------~~~~~~~ 145 (188)
T 2r8e_A 97 --------------QGQSNKLIAFSDLLEKL---AIAPENVAYVGDDLIDWPVMEKVGL--------------SVAVADA 145 (188)
T ss_dssp --------------CSCSCSHHHHHHHHHHH---TCCGGGEEEEESSGGGHHHHTTSSE--------------EEECTTS
T ss_pred --------------cCCCCCHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCC--------------EEEecCc
Confidence 01367999999999998 8999999999999999999999973 5566653
Q ss_pred ----CcccceEeCC--hhHHH-HHHHHHHhhhc
Q 044635 801 ----PSKAKYYLDD--TVEIV-RLMQGLACVAD 826 (831)
Q Consensus 801 ----~s~A~y~l~d--~~eV~-~~L~~L~~~~~ 826 (831)
...|+|++++ ..+++ ++++.+.....
T Consensus 146 ~~~~~~~ad~v~~~~~~~g~~~~~l~~ll~~~~ 178 (188)
T 2r8e_A 146 HPLLIPRADYVTRIAGGRGAVREVCDLLLLAQG 178 (188)
T ss_dssp CTTTGGGSSEECSSCTTTTHHHHHHHHHHHHTT
T ss_pred CHHHHhcCCEEEeCCCCCcHHHHHHHHHHHhcC
Confidence 3568899875 35555 77877766543
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.07 E-value=2.7e-09 Score=119.79 Aligned_cols=246 Identities=15% Similarity=0.170 Sum_probs=149.4
Q ss_pred HHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhc--CCeEeecCHHhHHH
Q 044635 194 IMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLN--SDLIGFHTFDYARH 271 (831)
Q Consensus 194 i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~--~dligf~t~~~~~~ 271 (831)
+.+..+| |+|.+|+.-...++..+..+..++|++ ..|.+.-+...++ |+++++.+-++. +|++-..+....++
T Consensus 109 ~l~~~kP--D~Vi~~gd~~~~l~~~laA~~~~IPv~-h~~aglrs~~~~~--~~p~~~~r~~~~~~a~~~~~~se~~~~~ 183 (403)
T 3ot5_A 109 VIAAENP--DIVLVHGDTTTSFAAGLATFYQQKMLG-HVEAGLRTWNKYS--PFPEEMNRQLTGVMADIHFSPTKQAKEN 183 (403)
T ss_dssp HHHHHCC--SEEEEETTCHHHHHHHHHHHHTTCEEE-EESCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHH
T ss_pred HHHHcCC--CEEEEECCchhHHHHHHHHHHhCCCEE-EEECCcccccccc--CCcHHHHHHHHHHhcCEEECCCHHHHHH
Confidence 3455677 899999976666665555555678874 3444433333332 444666555443 79988889988888
Q ss_pred HHHHHHHHhCCeecccCceeeEEEcCEEEEEEEee-cccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCccc
Q 044635 272 FLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILP-VGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDI 350 (831)
Q Consensus 272 Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P-~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~ 350 (831)
|.. +|... + +|.+.+ +++|...+..... .. .+.++++ ..++.+++.++|...
T Consensus 184 l~~-----~Gi~~--~-------------~i~vvGn~~~D~~~~~~~~~-~~-----~~~~~~l-~~~~~vlv~~~r~~~ 236 (403)
T 3ot5_A 184 LLA-----EGKDP--A-------------TIFVTGNTAIDALKTTVQKD-YH-----HPILENL-GDNRLILMTAHRREN 236 (403)
T ss_dssp HHH-----TTCCG--G-------------GEEECCCHHHHHHHHHSCTT-CC-----CHHHHSC-TTCEEEEECCCCHHH
T ss_pred HHH-----cCCCc--c-------------cEEEeCCchHHHHHhhhhhh-cc-----hHHHHhc-cCCCEEEEEeCcccc
Confidence 875 24321 1 223333 3566544421110 00 1223344 245667788999765
Q ss_pred -ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHH
Q 044635 351 -FKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYER 429 (831)
Q Consensus 351 -~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el 429 (831)
.|++..+++|+.++.+++|+++ +|.++.| .+ .+++.+++.. + ....|.+ .++++..++
T Consensus 237 ~~~~l~~ll~a~~~l~~~~~~~~----~v~~~~~----~~---~~~~~l~~~~---~------~~~~v~l-~~~l~~~~~ 295 (403)
T 3ot5_A 237 LGEPMQGMFEAVREIVESREDTE----LVYPMHL----NP---AVREKAMAIL---G------GHERIHL-IEPLDAIDF 295 (403)
T ss_dssp HTTHHHHHHHHHHHHHHHCTTEE----EEEECCS----CH---HHHHHHHHHH---T------TCTTEEE-ECCCCHHHH
T ss_pred cCcHHHHHHHHHHHHHHhCCCce----EEEecCC----CH---HHHHHHHHHh---C------CCCCEEE-eCCCCHHHH
Confidence 3789999999999999999754 6655432 12 2334444321 1 1124554 557889999
Q ss_pred HHHHHHcCEeEECCCccCCCCCCCC-CceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHhcCC
Q 044635 430 IAYYVVAECCLVTAVRDGSEPSSPK-KSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSALEMA 495 (831)
Q Consensus 430 ~aly~~ADv~vvtS~~eGma~~~~~-~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL~m~ 495 (831)
..+|+.||++|.+| .|...++.. +.|+|+....|..+++ ..+++|.+ |.++++++|.++|..+
T Consensus 296 ~~l~~~ad~vv~~S--Gg~~~EA~a~g~PvV~~~~~~~~~e~v~~g~~~lv~~-d~~~l~~ai~~ll~~~ 362 (403)
T 3ot5_A 296 HNFLRKSYLVFTDS--GGVQEEAPGMGVPVLVLRDTTERPEGIEAGTLKLIGT-NKENLIKEALDLLDNK 362 (403)
T ss_dssp HHHHHHEEEEEECC--HHHHHHGGGTTCCEEECCSSCSCHHHHHHTSEEECCS-CHHHHHHHHHHHHHCH
T ss_pred HHHHHhcCEEEECC--ccHHHHHHHhCCCEEEecCCCcchhheeCCcEEEcCC-CHHHHHHHHHHHHcCH
Confidence 99999999999888 344111111 4567766344444333 45677776 9999999999999743
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.04 E-value=3.1e-10 Score=113.92 Aligned_cols=66 Identities=20% Similarity=0.206 Sum_probs=53.1
Q ss_pred CCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEeCC--h
Q 044635 738 VNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLDD--T 811 (831)
Q Consensus 738 vnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~d--~ 811 (831)
.+|+.+++.+++.+ |++++++++|||+.||++|++.++ +++++++. ...|+|++.+ .
T Consensus 93 kpk~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~~~~ag--------------~~~~~~~~~~~~~~~ad~v~~~~~~ 155 (191)
T 3n1u_A 93 VDKRSAYQHLKKTL---GLNDDEFAYIGDDLPDLPLIQQVG--------------LGVAVSNAVPQVLEFADWRTERTGG 155 (191)
T ss_dssp SSCHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSS--------------EEEECTTCCHHHHHHSSEECSSCTT
T ss_pred CChHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHHCC--------------CEEEeCCccHHHHHhCCEEecCCCC
Confidence 47899999999998 999999999999999999999998 45677775 3578998864 4
Q ss_pred hHHHHHHHH
Q 044635 812 VEIVRLMQG 820 (831)
Q Consensus 812 ~eV~~~L~~ 820 (831)
+++++.|..
T Consensus 156 ~g~~~~l~~ 164 (191)
T 3n1u_A 156 RGAVRELCD 164 (191)
T ss_dssp TTHHHHHHH
T ss_pred CcHHHHHHH
Confidence 554544443
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.04 E-value=4e-10 Score=113.59 Aligned_cols=69 Identities=14% Similarity=0.127 Sum_probs=55.0
Q ss_pred CCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEeCC--h
Q 044635 738 VNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLDD--T 811 (831)
Q Consensus 738 vnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~d--~ 811 (831)
-+|+.+++.+++.+ |++++++++|||+.||++|++.++ +++++|+. +..|+|++.+ .
T Consensus 99 k~k~~~~~~~~~~~---~~~~~~~~~vGD~~nDi~~~~~ag--------------~~va~~na~~~~~~~ad~v~~~~~~ 161 (195)
T 3n07_A 99 DDKVQAYYDICQKL---AIAPEQTGYIGDDLIDWPVMEKVA--------------LRVCVADGHPLLAQRANYVTHIKGG 161 (195)
T ss_dssp SSHHHHHHHHHHHH---CCCGGGEEEEESSGGGHHHHTTSS--------------EEEECTTSCHHHHHHCSEECSSCTT
T ss_pred CCcHHHHHHHHHHh---CCCHHHEEEEcCCHHHHHHHHHCC--------------CEEEECChHHHHHHhCCEEEcCCCC
Confidence 36999999999998 999999999999999999999997 56788876 3578998853 4
Q ss_pred hHH-HHHHHHHHh
Q 044635 812 VEI-VRLMQGLAC 823 (831)
Q Consensus 812 ~eV-~~~L~~L~~ 823 (831)
+++ ..+++.+..
T Consensus 162 ~G~~~~~~~~il~ 174 (195)
T 3n07_A 162 HGAVREVCDLILQ 174 (195)
T ss_dssp TTHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 554 344444444
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=2.2e-10 Score=111.48 Aligned_cols=137 Identities=14% Similarity=0.097 Sum_probs=97.8
Q ss_pred cCceeEEecCCCccCCCCC---CCC----CCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEE
Q 044635 571 TTTRAILLDYDGTLMPQAS---IDK----SPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYF 643 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~---~~~----~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~ 643 (831)
+++|+++||+||||++... ... ........+|+.|.+ .|..++|+||++...+...+..+.-..+...
T Consensus 2 ~~ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~g~~~~i~T~~~~~~~~~~~~~~gl~~~~~~---- 76 (164)
T 3e8m_A 2 KEIKLILTDIDGVWTDGGMFYDQTGNEWKKFNTSDSAGIFWAHN-KGIPVGILTGEKTEIVRRRAEKLKVDYLFQG---- 76 (164)
T ss_dssp CCCCEEEECSTTTTSSSEEEECSSSCEEEEEEGGGHHHHHHHHH-TTCCEEEECSSCCHHHHHHHHHTTCSEEECS----
T ss_pred CcceEEEEcCCCceEcCcEEEcCCCcEEEEecCChHHHHHHHHH-CCCEEEEEeCCChHHHHHHHHHcCCCEeecc----
Confidence 3578999999999998320 111 011122235778866 5899999999998888888765421111111
Q ss_pred EEeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeE
Q 044635 644 FRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVT 723 (831)
Q Consensus 644 i~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~ 723 (831)
T Consensus 77 -------------------------------------------------------------------------------- 76 (164)
T 3e8m_A 77 -------------------------------------------------------------------------------- 76 (164)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC---
Q 044635 724 VKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK--- 800 (831)
Q Consensus 724 v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~--- 800 (831)
.-.|..+++.+++.+ |++++++++|||+.||++|++.++ +++.+++.
T Consensus 77 -------------~kpk~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~~~~ag--------------~~~~~~~~~~~ 126 (164)
T 3e8m_A 77 -------------VVDKLSAAEELCNEL---GINLEQVAYIGDDLNDAKLLKRVG--------------IAGVPASAPFY 126 (164)
T ss_dssp -------------CSCHHHHHHHHHHHH---TCCGGGEEEECCSGGGHHHHTTSS--------------EEECCTTSCHH
T ss_pred -------------cCChHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCC--------------CeEEcCChHHH
Confidence 157999999999998 999999999999999999999997 45666654
Q ss_pred -CcccceEeCC--hhH-HHHHHHHHH
Q 044635 801 -PSKAKYYLDD--TVE-IVRLMQGLA 822 (831)
Q Consensus 801 -~s~A~y~l~d--~~e-V~~~L~~L~ 822 (831)
+..|+|++.+ .++ +.++++.+.
T Consensus 127 ~~~~ad~v~~~~~~~g~~~e~~~~ll 152 (164)
T 3e8m_A 127 IRRLSTIFLEKRGGEGVFREFVEKVL 152 (164)
T ss_dssp HHTTCSSCCCCCTTTTHHHHHHHHHT
T ss_pred HHHhCcEEeccCCCCcHHHHHHHHHH
Confidence 3678888864 334 667776664
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.01 E-value=8.4e-10 Score=110.52 Aligned_cols=56 Identities=20% Similarity=0.216 Sum_probs=49.0
Q ss_pred CCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEeCC
Q 044635 738 VNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLDD 810 (831)
Q Consensus 738 vnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~d 810 (831)
.+|..+++.+++.+ |++++++++|||+.||++|++.++ +++++|+. ...|+|++.+
T Consensus 93 ~~K~~~~~~~~~~~---g~~~~~~~~vGD~~nDi~~~~~ag--------------~~~~~~~~~~~~~~~ad~v~~~ 152 (189)
T 3mn1_A 93 EDKLVVLDKLLAEL---QLGYEQVAYLGDDLPDLPVIRRVG--------------LGMAVANAASFVREHAHGITRA 152 (189)
T ss_dssp SCHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSS--------------EEEECTTSCHHHHHTSSEECSS
T ss_pred CChHHHHHHHHHHc---CCChhHEEEECCCHHHHHHHHHCC--------------CeEEeCCccHHHHHhCCEEecC
Confidence 67999999999998 999999999999999999999997 46778775 3578898865
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=2e-09 Score=116.00 Aligned_cols=229 Identities=15% Similarity=0.154 Sum_probs=126.7
Q ss_pred cCCHHHHHHHHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEEC---CCCHhhHHHHhCCCC--
Q 044635 558 KLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVS---AKSRKTLAEWFSPCE-- 632 (831)
Q Consensus 558 ~l~~~~~~~~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~S---GR~~~~l~~~~~~~~-- 632 (831)
.++.+.+.+- ..++|+|++|+||||++ .. .+.+.+.++|++|.+ .|..|+++| ||+...+...+..+.
T Consensus 8 ~~~~~~~~~~--~~~~k~i~~D~DGTL~~---~~-~~~~~~~~~l~~l~~-~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 8 RLRGAALRDV--LGRAQGVLFDCDGVLWN---GE-RAVPGAPELLERLAR-AGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp ECCHHHHHHH--HHHCSEEEECSBTTTEE---TT-EECTTHHHHHHHHHH-TTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred cCCHHHHHHH--HhhCCEEEECCCCcEec---CC-ccCcCHHHHHHHHHH-CCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 3455554443 22578999999999998 33 456789999999987 599999999 688887777665431
Q ss_pred ---CceEEecCCEEEEeC----------CCceEEEcCCcCCccHHHHHHHHHHHHh-ccCCC---eeEeeccceEEEeec
Q 044635 633 ---NLGIAAEHGYFFRLR----------RDEEWETCIPVADCGWKQIAEPVMKLYT-ETTDG---STIEDKETALVWSYE 695 (831)
Q Consensus 633 ---~~~liaenGa~i~~~----------~~~~w~~~~~~~~~~w~~~v~~il~~~~-e~~~g---s~ie~k~~~l~~~~~ 695 (831)
...+++.||+.+..- +...+. .. . ..+...+.... ..... .+.............
T Consensus 81 ~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~v~~--~g---~---~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~v~~~~ 152 (306)
T 2oyc_A 81 GLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFV--LG---G---EGLRAELRAAGLRLAGDPSAGDGAAPRVRAVLVGY 152 (306)
T ss_dssp SCCGGGEEEHHHHHHHHHHHHCCSCSSSCCEEEE--ES---C---HHHHHHHHHTTCEETTSCCCC---CCCEEEEEECC
T ss_pred cCChhhEEcHHHHHHHHHHhhCCccccCCCeEEE--EC---C---HHHHHHHHHCCCEeecccccccccCCCCCEEEEeC
Confidence 224565555433111 111111 00 0 11222222211 00000 000111111222211
Q ss_pred cCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCe-E------------------------EEEEeCCCCHHHHHHHHHHH
Q 044635 696 DADPDFGSCQAKELLDHLESVLANEPVTVKSGQN-L------------------------VEVKPQGVNKGLVAKRLLST 750 (831)
Q Consensus 696 ~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~-~------------------------vEV~p~gvnKG~al~~Ll~~ 750 (831)
+..+....+.+++..+.+ .....+.++.. . .+....+..|+.+++.+++.
T Consensus 153 --~~~~~~~~~~~~l~~l~~---~g~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~ 227 (306)
T 2oyc_A 153 --DEHFSFAKLREACAHLRD---PECLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITEN 227 (306)
T ss_dssp --CTTCCHHHHHHHHHHHTS---TTSEEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCCCEECSTTSTHHHHHHHHH
T ss_pred --CCCCCHHHHHHHHHHHHc---CCCEEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCCceeeCCCCHHHHHHHHHH
Confidence 111222233444444432 11122222111 1 12345678889999999999
Q ss_pred hhhcCCCcccEEEEcCCc-hhHHHHHHcchhcCCCCCCCCCceEEEEeCCC--------------CcccceEeCChhHHH
Q 044635 751 MQEREMLPDFVLCVGDDR-SDEDMFEVIISSMAGPSIAPRAEVFACTVGRK--------------PSKAKYYLDDTVEIV 815 (831)
Q Consensus 751 l~~~g~~~d~vla~GD~~-NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~--------------~s~A~y~l~d~~eV~ 815 (831)
+ |++++++++|||+. ||+.|.+.+|.. .+.|.-|.. ...++|++++..++.
T Consensus 228 l---gi~~~e~l~vGD~~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~el~ 293 (306)
T 2oyc_A 228 F---SIDPARTLMVGDRLETDILFGHRCGMT-----------TVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLT 293 (306)
T ss_dssp S---CCCGGGEEEEESCTTTHHHHHHHHTCE-----------EEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGGGGG
T ss_pred c---CCChHHEEEECCCchHHHHHHHHCCCe-----------EEEECCCCCCHHHHHhhhcccccCCCCCEEECCHHHHH
Confidence 8 99999999999995 999999999863 122333321 135788999988887
Q ss_pred HHHHH
Q 044635 816 RLMQG 820 (831)
Q Consensus 816 ~~L~~ 820 (831)
.+|++
T Consensus 294 ~~l~~ 298 (306)
T 2oyc_A 294 EGLED 298 (306)
T ss_dssp GGC--
T ss_pred HHHHh
Confidence 66553
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=98.98 E-value=2.9e-09 Score=110.91 Aligned_cols=73 Identities=15% Similarity=0.084 Sum_probs=57.2
Q ss_pred EeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCc-hhHHHHHHcchhcCCCCCCCCCceEEEEeCC--C------Cccc
Q 044635 734 KPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDR-SDEDMFEVIISSMAGPSIAPRAEVFACTVGR--K------PSKA 804 (831)
Q Consensus 734 ~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~-NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~--~------~s~A 804 (831)
...+-.|+.+++.+++++ |++++++++|||+. ||+.|.+.+|.. .+.|.-|. . ...+
T Consensus 175 ~~~~Kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~ 240 (259)
T 2ho4_A 175 MVVGKPEKTFFLEALRDA---DCAPEEAVMIGDDCRDDVDGAQNIGML-----------GILVKTGKYKAADEEKINPPP 240 (259)
T ss_dssp EECSTTSHHHHHHHGGGG---TCCGGGEEEEESCTTTTHHHHHHTTCE-----------EEEESSTTCCTTGGGGSSSCC
T ss_pred eEecCCCHHHHHHHHHHc---CCChHHEEEECCCcHHHHHHHHHCCCc-----------EEEECCCCCCcccccccCCCC
Confidence 345667899999999998 99999999999998 999999999852 23343342 1 2458
Q ss_pred ceEeCChhHHHHHHHH
Q 044635 805 KYYLDDTVEIVRLMQG 820 (831)
Q Consensus 805 ~y~l~d~~eV~~~L~~ 820 (831)
++++++..++.++|..
T Consensus 241 ~~~~~~l~~l~~~l~~ 256 (259)
T 2ho4_A 241 YLTCESFPHAVDHILQ 256 (259)
T ss_dssp SEEESCHHHHHHHHHH
T ss_pred CEEECCHHHHHHHHHH
Confidence 8899999999887753
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=9.4e-10 Score=110.27 Aligned_cols=65 Identities=20% Similarity=0.243 Sum_probs=54.1
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC---CcccceEeCC--
Q 044635 736 QGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK---PSKAKYYLDD-- 810 (831)
Q Consensus 736 ~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~---~s~A~y~l~d-- 810 (831)
.+.+|+.++..+++++ |++++++++|||+.||++|++.+|. +|.++.. +..|+|++++
T Consensus 140 ~~~~K~~~l~~~~~~l---gi~~~~~~~iGD~~~Di~~~~~ag~--------------~~~~~~~~~~~~~a~~v~~~~~ 202 (211)
T 1l7m_A 140 KENAKGEILEKIAKIE---GINLEDTVAVGDGANDISMFKKAGL--------------KIAFCAKPILKEKADICIEKRD 202 (211)
T ss_dssp STTHHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHCSE--------------EEEESCCHHHHTTCSEEECSSC
T ss_pred CCccHHHHHHHHHHHc---CCCHHHEEEEecChhHHHHHHHCCC--------------EEEECCCHHHHhhcceeecchh
Confidence 4789999999999998 9999999999999999999999984 4566633 3568999876
Q ss_pred hhHHHHH
Q 044635 811 TVEIVRL 817 (831)
Q Consensus 811 ~~eV~~~ 817 (831)
..++..+
T Consensus 203 ~~~l~~~ 209 (211)
T 1l7m_A 203 LREILKY 209 (211)
T ss_dssp GGGGGGG
T ss_pred HHHHHHh
Confidence 7776544
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.94 E-value=7.2e-09 Score=105.82 Aligned_cols=203 Identities=13% Similarity=0.082 Sum_probs=112.8
Q ss_pred cCceeEEecCCCccCCCCCCCCCCCHHH-HHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCC
Q 044635 571 TTTRAILLDYDGTLMPQASIDKSPNSKT-IDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRD 649 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~~~~~~s~~~-~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~ 649 (831)
+++|+|+||+||||++ ......+.. .++++++.. +...+...+|++.......+.... .......+.
T Consensus 23 ~~~k~i~fDlDGTL~d---~~~~~~~~~~~~~~~~~g~-~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~----- 90 (231)
T 3kzx_A 23 KQPTAVIFDWYNTLID---TSINIDRTTFYQVLDQMGY-KNIDLDSIPNSTIPKYLITLLGKR---WKEATILYE----- 90 (231)
T ss_dssp CCCSEEEECTBTTTEE---TTSSCCHHHHHHHHHHTTC-CCCCCTTSCTTTHHHHHHHHHGGG---HHHHHHHHH-----
T ss_pred CCCCEEEECCCCCCcC---CchhHHHHHHHHHHHHcCC-CHHHHHHHhCccHHHHHHHHhCch---HHHHHHHHH-----
Confidence 3579999999999998 667788888 899998755 355666678887654332221100 000000000
Q ss_pred ceEE-EcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcC-CCeEEEEc
Q 044635 650 EEWE-TCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLAN-EPVTVKSG 727 (831)
Q Consensus 650 ~~w~-~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~-~~v~v~~g 727 (831)
..+. ... .........+.++++...+. | ..+..... ... ..+...++.+. +.. ....+.+.
T Consensus 91 ~~~~~~~~-~~~~~~~~~~~~~l~~l~~~--g-------~~~~i~T~-~~~----~~~~~~l~~~g--l~~~f~~i~~~~ 153 (231)
T 3kzx_A 91 NSLEKSQK-SDNFMLNDGAIELLDTLKEN--N-------ITMAIVSN-KNG----ERLRSEIHHKN--LTHYFDSIIGSG 153 (231)
T ss_dssp HHHHHCCS-CCCCEECTTHHHHHHHHHHT--T-------CEEEEEEE-EEH----HHHHHHHHHTT--CGGGCSEEEEET
T ss_pred HHHhhhcc-cccceECcCHHHHHHHHHHC--C-------CeEEEEEC-CCH----HHHHHHHHHCC--chhheeeEEccc
Confidence 0000 000 00000011233344433321 1 11111111 100 11222222211 111 12222222
Q ss_pred CeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcc-cEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCC-cccc
Q 044635 728 QNLVEVKPQGVNKGLVAKRLLSTMQEREMLPD-FVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKP-SKAK 805 (831)
Q Consensus 728 ~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d-~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~-s~A~ 805 (831)
. ...+..|..+++.+++.+ |++++ ++++|||+.||+.|++.+|. .+|.+|+.. ..+.
T Consensus 154 ~-----~~~~Kp~~~~~~~~~~~l---gi~~~~~~v~vGD~~~Di~~a~~aG~-------------~~v~~~~~~~~~~~ 212 (231)
T 3kzx_A 154 D-----TGTIKPSPEPVLAALTNI---NIEPSKEVFFIGDSISDIQSAIEAGC-------------LPIKYGSTNIIKDI 212 (231)
T ss_dssp S-----SSCCTTSSHHHHHHHHHH---TCCCSTTEEEEESSHHHHHHHHHTTC-------------EEEEECC-----CC
T ss_pred c-----cCCCCCChHHHHHHHHHc---CCCcccCEEEEcCCHHHHHHHHHCCC-------------eEEEECCCCCCCCc
Confidence 1 244566788999999998 99998 99999999999999999984 367888764 4888
Q ss_pred eEeCChhHHHHHHHHHHh
Q 044635 806 YYLDDTVEIVRLMQGLAC 823 (831)
Q Consensus 806 y~l~d~~eV~~~L~~L~~ 823 (831)
+.+++..++.++|+++.+
T Consensus 213 ~~~~~~~el~~~l~~~l~ 230 (231)
T 3kzx_A 213 LSFKNFYDIRNFICQLIN 230 (231)
T ss_dssp EEESSHHHHHHHHHHHHC
T ss_pred eeeCCHHHHHHHHHHHhc
Confidence 999999999999998865
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=98.90 E-value=6.6e-09 Score=105.96 Aligned_cols=70 Identities=20% Similarity=0.229 Sum_probs=55.3
Q ss_pred CCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEeCCh--
Q 044635 738 VNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLDDT-- 811 (831)
Q Consensus 738 vnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~d~-- 811 (831)
.+|..+++.+++.+ |++++++++|||+.||++|++.++ ++|++++. +..|+|++.+.
T Consensus 123 k~K~~~l~~~~~~l---g~~~~~~~~vGDs~nDi~~~~~ag--------------~~~a~~~~~~~~~~~Ad~v~~~~~~ 185 (211)
T 3ij5_A 123 SDKLVAYHELLATL---QCQPEQVAYIGDDLIDWPVMAQVG--------------LSVAVADAHPLLLPKAHYVTRIKGG 185 (211)
T ss_dssp SSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHTTSS--------------EEEECTTSCTTTGGGSSEECSSCTT
T ss_pred CChHHHHHHHHHHc---CcCcceEEEEcCCHHHHHHHHHCC--------------CEEEeCCccHHHHhhCCEEEeCCCC
Confidence 46999999999998 999999999999999999999997 46777764 45789988643
Q ss_pred hH-HHHHHHHHHhh
Q 044635 812 VE-IVRLMQGLACV 824 (831)
Q Consensus 812 ~e-V~~~L~~L~~~ 824 (831)
++ |.++++.+...
T Consensus 186 ~G~v~e~~~~ll~~ 199 (211)
T 3ij5_A 186 RGAVREVCDLILLA 199 (211)
T ss_dssp TTHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHH
Confidence 33 55565555543
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.87 E-value=3.8e-09 Score=106.19 Aligned_cols=79 Identities=14% Similarity=0.171 Sum_probs=60.2
Q ss_pred cCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----Cc
Q 044635 727 GQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PS 802 (831)
Q Consensus 727 g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s 802 (831)
...+.++.+.+.+|+.+++.+.+.+ |++++++++|||+.||++|++ +|.. +-.+++.+++. +.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~vGD~~~Di~~~~-~G~~---------~~~v~~~~~~~~~~~~~ 202 (219)
T 3kd3_A 136 DGSFKELDNSNGACDSKLSAFDKAK---GLIDGEVIAIGDGYTDYQLYE-KGYA---------TKFIAYMEHIEREKVIN 202 (219)
T ss_dssp TSBEEEEECTTSTTTCHHHHHHHHG---GGCCSEEEEEESSHHHHHHHH-HTSC---------SEEEEECSSCCCHHHHH
T ss_pred CCceeccCCCCCCcccHHHHHHHHh---CCCCCCEEEEECCHhHHHHHh-CCCC---------cEEEeccCccccHHHHh
Confidence 3455678889999999999999987 899999999999999999985 4421 11133333443 35
Q ss_pred ccceEeCChhHHHHHH
Q 044635 803 KAKYYLDDTVEIVRLM 818 (831)
Q Consensus 803 ~A~y~l~d~~eV~~~L 818 (831)
.|+|++++.+++.++|
T Consensus 203 ~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 203 LSKYVARNVAELASLI 218 (219)
T ss_dssp HCSEEESSHHHHHHHH
T ss_pred hcceeeCCHHHHHHhh
Confidence 6999999999988765
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.85 E-value=2.6e-08 Score=98.10 Aligned_cols=66 Identities=11% Similarity=0.044 Sum_probs=52.7
Q ss_pred HHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC--------CcccceEeCChh
Q 044635 741 GLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK--------PSKAKYYLDDTV 812 (831)
Q Consensus 741 G~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~--------~s~A~y~l~d~~ 812 (831)
....+.+++++ |++++++++|||+.||+.|.+.+|.. .+.|..|.. ...|+|++++..
T Consensus 104 ~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~d~v~~~l~ 169 (179)
T 3l8h_A 104 PGMYRDIARRY---DVDLAGVPAVGDSLRDLQAAAQAGCA-----------PWLVQTGNGRKTLAQGGLPEGTRVCEDLA 169 (179)
T ss_dssp SHHHHHHHHHH---TCCCTTCEEEESSHHHHHHHHHHTCE-----------EEEESTTTHHHHHHHCCCCTTEEEESSHH
T ss_pred HHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCc-----------EEEECCCCcchhhhhcccCCCcEEecCHH
Confidence 34578888888 99999999999999999999999852 245555652 256899999999
Q ss_pred HHHHHHHH
Q 044635 813 EIVRLMQG 820 (831)
Q Consensus 813 eV~~~L~~ 820 (831)
++.++|..
T Consensus 170 el~~~l~~ 177 (179)
T 3l8h_A 170 AVAEQLLQ 177 (179)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99988753
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.78 E-value=1.3e-08 Score=103.41 Aligned_cols=78 Identities=15% Similarity=0.090 Sum_probs=64.4
Q ss_pred EEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC------Ccccce
Q 044635 733 VKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK------PSKAKY 806 (831)
Q Consensus 733 V~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~------~s~A~y 806 (831)
..+.+..|+.+++.+++++ |++++++++|||+.||++|++.+|.. .+.|++|+. +..|+|
T Consensus 137 ~~~~~kp~~~~~~~~~~~l---gi~~~~~i~iGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~ad~ 202 (226)
T 3mc1_A 137 LDGKLSTKEDVIRYAMESL---NIKSDDAIMIGDREYDVIGALKNNLP-----------SIGVTYGFGSYEELKNAGANY 202 (226)
T ss_dssp TTSSSCSHHHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHTTTCC-----------EEEESSSSSCHHHHHHHTCSE
T ss_pred CCCCCCCCHHHHHHHHHHh---CcCcccEEEECCCHHHHHHHHHCCCC-----------EEEEccCCCCHHHHHHcCCCE
Confidence 3467889999999999999 99999999999999999999999852 356777764 367899
Q ss_pred EeCChhHHHHHHHHHHhh
Q 044635 807 YLDDTVEIVRLMQGLACV 824 (831)
Q Consensus 807 ~l~d~~eV~~~L~~L~~~ 824 (831)
++++.+++.++|....+.
T Consensus 203 v~~s~~el~~~~~~~~~~ 220 (226)
T 3mc1_A 203 IVNSVDELHKKILELREG 220 (226)
T ss_dssp EESSHHHHHHHHHTC---
T ss_pred EECCHHHHHHHHHHHhcc
Confidence 999999999998865543
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.78 E-value=1.4e-08 Score=104.08 Aligned_cols=73 Identities=16% Similarity=0.178 Sum_probs=62.2
Q ss_pred EeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCC------cccceE
Q 044635 734 KPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKP------SKAKYY 807 (831)
Q Consensus 734 ~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~------s~A~y~ 807 (831)
.+.+..|+.+++.+++++ |++++++++|||+.||+.|++.+|.. .+.|++|+.. ..|+|+
T Consensus 156 ~~~~kp~~~~~~~~~~~l---g~~~~~~i~vGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~ad~v 221 (237)
T 4ex6_A 156 VERGKPHPDMALHVARGL---GIPPERCVVIGDGVPDAEMGRAAGMT-----------VIGVSYGVSGPDELMRAGADTV 221 (237)
T ss_dssp SSSCTTSSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHTTCE-----------EEEESSSSSCHHHHHHTTCSEE
T ss_pred CCCCCCCHHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHCCCe-----------EEEEecCCCCHHHHHhcCCCEE
Confidence 466888999999999999 99999999999999999999999853 3566677532 479999
Q ss_pred eCChhHHHHHHHH
Q 044635 808 LDDTVEIVRLMQG 820 (831)
Q Consensus 808 l~d~~eV~~~L~~ 820 (831)
+++..++.++|+.
T Consensus 222 ~~~~~el~~~l~~ 234 (237)
T 4ex6_A 222 VDSFPAAVTAVLD 234 (237)
T ss_dssp ESSHHHHHHHHHH
T ss_pred ECCHHHHHHHHHc
Confidence 9999999988864
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=1.2e-08 Score=102.53 Aligned_cols=70 Identities=17% Similarity=0.121 Sum_probs=59.6
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEeCCh
Q 044635 736 QGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLDDT 811 (831)
Q Consensus 736 ~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~d~ 811 (831)
.+-.|+.+++.+++.+ |++++++++|||+.||++|.+.+|. .+|.|++. +..|+|++++.
T Consensus 125 ~~kp~~~~~~~~~~~~---g~~~~~~i~iGD~~~Di~~a~~aG~-------------~~i~v~~~~~~~~~~ad~v~~~~ 188 (205)
T 3m9l_A 125 PPKPHPGGLLKLAEAW---DVSPSRMVMVGDYRFDLDCGRAAGT-------------RTVLVNLPDNPWPELTDWHARDC 188 (205)
T ss_dssp CCTTSSHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTC-------------EEEECSSSSCSCGGGCSEECSSH
T ss_pred CCCCCHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHcCC-------------EEEEEeCCCCcccccCCEEeCCH
Confidence 4556788999999998 9999999999999999999999984 36777764 45699999999
Q ss_pred hHHHHHHHHH
Q 044635 812 VEIVRLMQGL 821 (831)
Q Consensus 812 ~eV~~~L~~L 821 (831)
+|+.+.|+.=
T Consensus 189 ~el~~~~~~~ 198 (205)
T 3m9l_A 189 AQLRDLLSAE 198 (205)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 9999888753
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.74 E-value=2.5e-09 Score=109.12 Aligned_cols=71 Identities=13% Similarity=0.150 Sum_probs=57.2
Q ss_pred CHHHHHHHHHHHhhhcC--CCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCC------cccceEeCC
Q 044635 739 NKGLVAKRLLSTMQERE--MLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKP------SKAKYYLDD 810 (831)
Q Consensus 739 nKG~al~~Ll~~l~~~g--~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~------s~A~y~l~d 810 (831)
.+..+++.+++.+ | ++++++++|||+.||+.|.+.+|.. ++.|..|... ..|+|++++
T Consensus 152 ~~~~~~~~~~~~l---g~~~~~~~~i~iGD~~~Di~~a~~aG~~-----------~i~v~~~~~~~~~~~~~~a~~v~~~ 217 (234)
T 2hcf_A 152 LPHIALERARRMT---GANYSPSQIVIIGDTEHDIRCARELDAR-----------SIAVATGNFTMEELARHKPGTLFKN 217 (234)
T ss_dssp HHHHHHHHHHHHH---CCCCCGGGEEEEESSHHHHHHHHTTTCE-----------EEEECCSSSCHHHHHTTCCSEEESC
T ss_pred hHHHHHHHHHHHh---CCCCCcccEEEECCCHHHHHHHHHCCCc-----------EEEEcCCCCCHHHHHhCCCCEEeCC
Confidence 3467788889988 8 8999999999999999999999853 2455555432 238999999
Q ss_pred hhHHHHHHHHHHh
Q 044635 811 TVEIVRLMQGLAC 823 (831)
Q Consensus 811 ~~eV~~~L~~L~~ 823 (831)
.+++.++|+.+..
T Consensus 218 ~~el~~~l~~~~~ 230 (234)
T 2hcf_A 218 FAETDEVLASILT 230 (234)
T ss_dssp SCCHHHHHHHHHC
T ss_pred HHhHHHHHHHHhc
Confidence 9999999998764
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.73 E-value=1.2e-08 Score=102.82 Aligned_cols=75 Identities=11% Similarity=0.045 Sum_probs=52.6
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCC---C-----Ccccce
Q 044635 735 PQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGR---K-----PSKAKY 806 (831)
Q Consensus 735 p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~---~-----~s~A~y 806 (831)
+.+..|+.+++.+++++ |++++++++|||+.||++|++.+|.. ++.|++ . ...|+|
T Consensus 142 ~~~k~~~~~~~~~~~~~---~~~~~~~i~iGD~~nDi~~~~~aG~~-------------~~~~~~~~~~~~~l~~~~ad~ 205 (225)
T 3d6j_A 142 THHKPDPEGLLLAIDRL---KACPEEVLYIGDSTVDAGTAAAAGVS-------------FTGVTSGMTTAQEFQAYPYDR 205 (225)
T ss_dssp SSCTTSTHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-------------EEEETTSSCCTTGGGGSCCSE
T ss_pred CCCCCChHHHHHHHHHh---CCChHHeEEEcCCHHHHHHHHHCCCe-------------EEEECCCCCChHHHhhcCCCE
Confidence 45667789999999998 99999999999999999999999853 233322 1 123899
Q ss_pred EeCChhHHHHHHHHHHhhh
Q 044635 807 YLDDTVEIVRLMQGLACVA 825 (831)
Q Consensus 807 ~l~d~~eV~~~L~~L~~~~ 825 (831)
++++.+++.+.|+.+.+++
T Consensus 206 v~~~~~el~~~l~~~~~~~ 224 (225)
T 3d6j_A 206 IISTLGQLISVPEDKSGCP 224 (225)
T ss_dssp EESSGGGGC----------
T ss_pred EECCHHHHHHhhhhhcCCC
Confidence 9999999999998876543
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.70 E-value=1.4e-08 Score=103.40 Aligned_cols=74 Identities=12% Similarity=0.093 Sum_probs=61.1
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCc-hhHHHHHHcchhcCCCCCCCCCceEEEEeCCCC----cccceEeCC
Q 044635 736 QGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDR-SDEDMFEVIISSMAGPSIAPRAEVFACTVGRKP----SKAKYYLDD 810 (831)
Q Consensus 736 ~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~-NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~----s~A~y~l~d 810 (831)
.+-.|+.+++.+++++ |++++++++|||+. ||+.|++.+|.. ++.|..|+.. ..|+|++++
T Consensus 153 ~~kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~~a~~aG~~-----------~~~v~~~~~~~~~~~~a~~~~~~ 218 (234)
T 3u26_A 153 FFKPHPRIFELALKKA---GVKGEEAVYVGDNPVKDCGGSKNLGMT-----------SILLDRKGEKREFWDKCDFIVSD 218 (234)
T ss_dssp BCTTSHHHHHHHHHHH---TCCGGGEEEEESCTTTTHHHHHTTTCE-----------EEEECSSSTTGGGGGGCSEEESS
T ss_pred CCCcCHHHHHHHHHHc---CCCchhEEEEcCCcHHHHHHHHHcCCE-----------EEEECCCCCccccccCCCEeeCC
Confidence 3455688899999999 99999999999997 999999999853 3566667542 389999999
Q ss_pred hhHHHHHHHHHHh
Q 044635 811 TVEIVRLMQGLAC 823 (831)
Q Consensus 811 ~~eV~~~L~~L~~ 823 (831)
..++.++|+.+..
T Consensus 219 ~~el~~~l~~~~~ 231 (234)
T 3u26_A 219 LREVIKIVDELNG 231 (234)
T ss_dssp THHHHHHHHHHC-
T ss_pred HHHHHHHHHHHhh
Confidence 9999999988753
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=3.9e-08 Score=99.99 Aligned_cols=68 Identities=10% Similarity=0.067 Sum_probs=53.1
Q ss_pred CHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCce-EEEEeCCCC-----cccceEeCChh
Q 044635 739 NKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEV-FACTVGRKP-----SKAKYYLDDTV 812 (831)
Q Consensus 739 nKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~-~~v~vG~~~-----s~A~y~l~d~~ 812 (831)
.|..+++.+++.+ |++++++++|||+.||+.|.+.+|.. . +.|..|... ..|+|++++..
T Consensus 132 P~p~~~~~~~~~l---gi~~~~~~~VGD~~~Di~~a~~aG~~-----------~~i~v~~g~~~~~~~~~~~d~vi~~l~ 197 (211)
T 2gmw_A 132 PHPGMLLSARDYL---HIDMAASYMVGDKLEDMQAAVAANVG-----------TKVLVRTGKPITPEAENAADWVLNSLA 197 (211)
T ss_dssp TSCHHHHHHHHHH---TBCGGGCEEEESSHHHHHHHHHTTCS-----------EEEEESSSSCCCHHHHHHCSEEESCGG
T ss_pred CCHHHHHHHHHHc---CCCHHHEEEEcCCHHHHHHHHHCCCc-----------eEEEEecCCCccccccCCCCEEeCCHH
Confidence 4567788888888 89999999999999999999999842 2 344445321 35889999999
Q ss_pred HHHHHHHH
Q 044635 813 EIVRLMQG 820 (831)
Q Consensus 813 eV~~~L~~ 820 (831)
++.++|..
T Consensus 198 el~~~l~~ 205 (211)
T 2gmw_A 198 DLPQAIKK 205 (211)
T ss_dssp GHHHHHHC
T ss_pred HHHHHHHh
Confidence 99887754
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.66 E-value=8.7e-10 Score=112.38 Aligned_cols=73 Identities=10% Similarity=-0.022 Sum_probs=58.6
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCc-hhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEeC
Q 044635 735 PQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDR-SDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLD 809 (831)
Q Consensus 735 p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~-NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~ 809 (831)
+.+-.|+.+++.+++.+ |++++++++|||+. ||+.|.+.+|.. ++.|.-|.. ...|+|+++
T Consensus 152 ~~~kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~~a~~aG~~-----------~~~v~~~~~~~~~~~~~~~~~~ 217 (230)
T 3vay_A 152 GIGKPDPAPFLEALRRA---KVDASAAVHVGDHPSDDIAGAQQAGMR-----------AIWYNPQGKAWDADRLPDAEIH 217 (230)
T ss_dssp TCCTTSHHHHHHHHHHH---TCCGGGEEEEESCTTTTHHHHHHTTCE-----------EEEECTTCCCCCSSSCCSEEES
T ss_pred CCCCcCHHHHHHHHHHh---CCCchheEEEeCChHHHHHHHHHCCCE-----------EEEEcCCCCCCcccCCCCeeEC
Confidence 34566789999999999 99999999999997 999999999853 123333332 457899999
Q ss_pred ChhHHHHHHHHH
Q 044635 810 DTVEIVRLMQGL 821 (831)
Q Consensus 810 d~~eV~~~L~~L 821 (831)
+..++.++|+++
T Consensus 218 ~l~el~~~l~~~ 229 (230)
T 3vay_A 218 NLSQLPEVLARW 229 (230)
T ss_dssp SGGGHHHHHHTT
T ss_pred CHHHHHHHHHhh
Confidence 999999998865
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.63 E-value=1.3e-07 Score=99.02 Aligned_cols=76 Identities=11% Similarity=0.029 Sum_probs=64.5
Q ss_pred EeCCCCHHHHHHHHHHHhhhcCCCc-ccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC------------
Q 044635 734 KPQGVNKGLVAKRLLSTMQEREMLP-DFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK------------ 800 (831)
Q Consensus 734 ~p~gvnKG~al~~Ll~~l~~~g~~~-d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~------------ 800 (831)
.+.+..|+.+++.+++++ |+++ +++++|||+.||+.|.+.+|.. .+.|+.|..
T Consensus 164 ~~~~kp~~~~~~~~~~~l---gi~~~~~~i~vGD~~~Di~~a~~aG~~-----------~v~v~~g~~~~~~~~~~~~~~ 229 (277)
T 3iru_A 164 VVRGRPFPDMALKVALEL---EVGHVNGCIKVDDTLPGIEEGLRAGMW-----------TVGVSCSGNEVGLDREDWQAL 229 (277)
T ss_dssp SSSCTTSSHHHHHHHHHH---TCSCGGGEEEEESSHHHHHHHHHTTCE-----------EEEECSSSTTTCCCHHHHHHS
T ss_pred cCCCCCCHHHHHHHHHHc---CCCCCccEEEEcCCHHHHHHHHHCCCe-----------EEEEecCCcccccchhhhhhc
Confidence 567888999999999999 9999 9999999999999999999852 356666731
Q ss_pred -----------------CcccceEeCChhHHHHHHHHHHh
Q 044635 801 -----------------PSKAKYYLDDTVEIVRLMQGLAC 823 (831)
Q Consensus 801 -----------------~s~A~y~l~d~~eV~~~L~~L~~ 823 (831)
...|+|++++..++..+|+.+..
T Consensus 230 ~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~ 269 (277)
T 3iru_A 230 SSDEQQSYRQHAEQRLFNAGAHYVIDSVADLETVITDVNR 269 (277)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCSEEESSGGGTHHHHHHHHH
T ss_pred chhhhhhhhhhhHHHHhhCCCCEEecCHHHHHHHHHHHHH
Confidence 23589999999999999988765
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=98.60 E-value=2.3e-07 Score=97.12 Aligned_cols=205 Identities=13% Similarity=0.091 Sum_probs=113.1
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCC----C----CCceEEecCCEE
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSP----C----ENLGIAAEHGYF 643 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~----~----~~~~liaenGa~ 643 (831)
+.|+|+||+||||++ ....+ +.+.++|+.+.+ .|..++++|||+......+... + +...+++.+|+.
T Consensus 4 ~~k~v~fDlDGTL~~---~~~~~-~~~~~~l~~l~~-~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~ 78 (264)
T 1yv9_A 4 DYQGYLIDLDGTIYL---GKEPI-PAGKRFVERLQE-KDLPFLFVTNNTTKSPETVAQRLANEFDIHVPASLVYTATLAT 78 (264)
T ss_dssp SCCEEEECCBTTTEE---TTEEC-HHHHHHHHHHHH-TTCCEEEEECCCSSCHHHHHHHHHHHSCCCCCGGGEEEHHHHH
T ss_pred cCCEEEEeCCCeEEe---CCEEC-cCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCChhhEEcHHHHH
Confidence 478999999999998 44444 788899999976 5999999999987665554432 2 123456666553
Q ss_pred EEeC----CCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEee-ccceEEEeeccCCCccchHHHHHHHHHHHhHhc
Q 044635 644 FRLR----RDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIED-KETALVWSYEDADPDFGSCQAKELLDHLESVLA 718 (831)
Q Consensus 644 i~~~----~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~-k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~ 718 (831)
+..- .+....... ...+...++.+ |..+.. ....+...+... .....+.+++..|. .
T Consensus 79 ~~~~~~~~~~~~~~~~g-------~~~l~~~l~~~-----g~~~~~~~~~~v~~~~~~~---~~~~~~~~~l~~l~---~ 140 (264)
T 1yv9_A 79 IDYMKEANRGKKVFVIG-------EAGLIDLILEA-----GFEWDETNPDYVVVGLDTE---LSYEKVVLATLAIQ---K 140 (264)
T ss_dssp HHHHHHHCCCSEEEEES-------CHHHHHHHHHT-----TCEECSSSCSEEEECCCTT---CCHHHHHHHHHHHH---T
T ss_pred HHHHHhhCCCCEEEEEe-------CHHHHHHHHHc-----CCcccCCCCCEEEEECCCC---cCHHHHHHHHHHHh---C
Confidence 3210 001111000 01222223222 111111 111111122111 11223455555553 2
Q ss_pred CCCeEEEEcC-eEE----EEEe-----------------CCCCHH--HHHHHHHHHhhhcCCCcccEEEEcCC-chhHHH
Q 044635 719 NEPVTVKSGQ-NLV----EVKP-----------------QGVNKG--LVAKRLLSTMQEREMLPDFVLCVGDD-RSDEDM 773 (831)
Q Consensus 719 ~~~v~v~~g~-~~v----EV~p-----------------~gvnKG--~al~~Ll~~l~~~g~~~d~vla~GD~-~NDe~M 773 (831)
+..+ +.++. ... .+.+ .+..|. .+.+.+++.+ |++++++++|||+ .||+.|
T Consensus 141 g~~~-i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~~ 216 (264)
T 1yv9_A 141 GALF-IGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYIGKPKAIIMERAIAHL---GVEKEQVIMVGDNYETDIQS 216 (264)
T ss_dssp TCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHH---CSCGGGEEEEESCTTTHHHH
T ss_pred CCEE-EEECCCCcccCCCCcccCCcHHHHHHHHHhCCCccccCCCCHHHHHHHHHHc---CCCHHHEEEECCCcHHHHHH
Confidence 2223 22221 111 1111 124565 4888899988 9999999999999 699999
Q ss_pred HHHcchhcCCCCCCCCCceEEEEeCCCC--------cccceEeCChhHH
Q 044635 774 FEVIISSMAGPSIAPRAEVFACTVGRKP--------SKAKYYLDDTVEI 814 (831)
Q Consensus 774 f~~a~~~~~~~~~~~~~~~~~v~vG~~~--------s~A~y~l~d~~eV 814 (831)
.+.+|.. .+.|..|... ..|+|++++..++
T Consensus 217 a~~aG~~-----------~i~v~~g~~~~~~l~~~~~~~d~v~~~l~el 254 (264)
T 1yv9_A 217 GIQNGID-----------SLLVTSGFTPKSAVPTLPTPPTYVVDSLDEW 254 (264)
T ss_dssp HHHHTCE-----------EEEETTSSSCSSSTTTCSSCCSEEESSGGGC
T ss_pred HHHcCCc-----------EEEECCCCCCHHHHHhcCCCCCEEEecHHHH
Confidence 9999852 1334445321 1688998887664
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=98.59 E-value=1.2e-07 Score=99.77 Aligned_cols=60 Identities=17% Similarity=0.217 Sum_probs=50.5
Q ss_pred CHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEe--CChh
Q 044635 739 NKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYL--DDTV 812 (831)
Q Consensus 739 nKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l--~d~~ 812 (831)
+|+.+++.+.+.+ ++++|||+.||++|++.+| ++|++|+. +..|++.+ ++.+
T Consensus 194 ~k~~~~k~~~~~~--------~~~~vGD~~nDi~~~~~Ag--------------~~va~~~~~~~~~~~a~~~~~~~~~~ 251 (280)
T 3skx_A 194 EKAEKVKEVQQKY--------VTAMVGDGVNDAPALAQAD--------------VGIAIGAGTDVAVETADIVLVRNDPR 251 (280)
T ss_dssp GHHHHHHHHHTTS--------CEEEEECTTTTHHHHHHSS--------------EEEECSCCSSSCCCSSSEECSSCCTH
T ss_pred HHHHHHHHHHhcC--------CEEEEeCCchhHHHHHhCC--------------ceEEecCCcHHHHhhCCEEEeCCCHH
Confidence 6999999887653 6899999999999999997 57888874 45688887 8999
Q ss_pred HHHHHHHH
Q 044635 813 EIVRLMQG 820 (831)
Q Consensus 813 eV~~~L~~ 820 (831)
+|.++|+.
T Consensus 252 ~l~~~l~~ 259 (280)
T 3skx_A 252 DVAAIVEL 259 (280)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999874
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.59 E-value=6.9e-08 Score=97.31 Aligned_cols=68 Identities=22% Similarity=0.200 Sum_probs=53.5
Q ss_pred EeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC---CcccceEeC-
Q 044635 734 KPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK---PSKAKYYLD- 809 (831)
Q Consensus 734 ~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~---~s~A~y~l~- 809 (831)
.+.+.+|..+++.+++.+ |++++++++|||+.||++|++.+|. ++.+... +..|+|+++
T Consensus 137 ~~~~k~k~~~~~~~~~~~---g~~~~~~i~vGDs~~Di~~a~~aG~--------------~~~~~~~~~l~~~ad~v~~~ 199 (217)
T 3m1y_A 137 MMFSHSKGEMLLVLQRLL---NISKTNTLVVGDGANDLSMFKHAHI--------------KIAFNAKEVLKQHATHCINE 199 (217)
T ss_dssp CCSTTHHHHHHHHHHHHH---TCCSTTEEEEECSGGGHHHHTTCSE--------------EEEESCCHHHHTTCSEEECS
T ss_pred CCCCCChHHHHHHHHHHc---CCCHhHEEEEeCCHHHHHHHHHCCC--------------eEEECccHHHHHhcceeecc
Confidence 456889999999999998 9999999999999999999999984 4455332 468999885
Q ss_pred -ChhHHHHHH
Q 044635 810 -DTVEIVRLM 818 (831)
Q Consensus 810 -d~~eV~~~L 818 (831)
+-.++..+.
T Consensus 200 ~dl~~~~~~~ 209 (217)
T 3m1y_A 200 PDLALIKPLI 209 (217)
T ss_dssp SBGGGGTTC-
T ss_pred cCHHHHHHHh
Confidence 345554443
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.58 E-value=2.8e-09 Score=108.59 Aligned_cols=72 Identities=10% Similarity=0.097 Sum_probs=56.5
Q ss_pred CCCHHHHHHHHHHHhhhcCCCcccEEEEcCCc-hhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEeCCh
Q 044635 737 GVNKGLVAKRLLSTMQEREMLPDFVLCVGDDR-SDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLDDT 811 (831)
Q Consensus 737 gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~-NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~d~ 811 (831)
.-.|..+++.+++++ |++++++++|||+. ||++|++.+|... +.+.-|+. ...|+|++++.
T Consensus 157 ~kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~nDi~~a~~aG~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 222 (235)
T 2om6_A 157 YKPRKEMFEKVLNSF---EVKPEESLHIGDTYAEDYQGARKVGMWA-----------VWINQEGDKVRKLEERGFEIPSI 222 (235)
T ss_dssp CTTCHHHHHHHHHHT---TCCGGGEEEEESCTTTTHHHHHHTTSEE-----------EEECTTCCSCEEEETTEEEESSG
T ss_pred CCCCHHHHHHHHHHc---CCCccceEEECCChHHHHHHHHHCCCEE-----------EEECCCCCCcccCCCCcchHhhH
Confidence 345788999999998 99999999999999 9999999998631 12222432 23478899999
Q ss_pred hHHHHHHHHHH
Q 044635 812 VEIVRLMQGLA 822 (831)
Q Consensus 812 ~eV~~~L~~L~ 822 (831)
.++.++|+.+.
T Consensus 223 ~el~~~l~~~~ 233 (235)
T 2om6_A 223 ANLKDVIELIS 233 (235)
T ss_dssp GGHHHHHHHTC
T ss_pred HHHHHHHHHHh
Confidence 99999988764
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.57 E-value=1.1e-07 Score=100.46 Aligned_cols=72 Identities=6% Similarity=0.015 Sum_probs=57.2
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCc-ccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC--------Ccccc
Q 044635 735 PQGVNKGLVAKRLLSTMQEREMLP-DFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK--------PSKAK 805 (831)
Q Consensus 735 p~gvnKG~al~~Ll~~l~~~g~~~-d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~--------~s~A~ 805 (831)
..+-.|+.+++.+++++ |+++ +++++|||+.||+.|.+.+|.. .++.++.. ...|+
T Consensus 201 ~~~Kp~~~~~~~~~~~l---gi~~~~~~i~vGD~~~Di~~a~~aG~~------------~~~~~~~~~~~~~~~~~~~ad 265 (282)
T 3nuq_A 201 LVCKPHVKAFEKAMKES---GLARYENAYFIDDSGKNIETGIKLGMK------------TCIHLVENEVNEILGQTPEGA 265 (282)
T ss_dssp CCCTTSHHHHHHHHHHH---TCCCGGGEEEEESCHHHHHHHHHHTCS------------EEEEECSCCC----CCCCTTC
T ss_pred cCCCcCHHHHHHHHHHc---CCCCcccEEEEcCCHHHHHHHHHCCCe------------EEEEEcCCccccccccCCCCC
Confidence 34567999999999999 9998 9999999999999999999853 22333221 34788
Q ss_pred eEeCChhHHHHHHHHH
Q 044635 806 YYLDDTVEIVRLMQGL 821 (831)
Q Consensus 806 y~l~d~~eV~~~L~~L 821 (831)
|++++..++.++|..|
T Consensus 266 ~vi~sl~el~~~l~~l 281 (282)
T 3nuq_A 266 IVISDILELPHVVSDL 281 (282)
T ss_dssp EEESSGGGGGGTSGGG
T ss_pred EEeCCHHHHHHHhhhh
Confidence 9999999988877654
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.57 E-value=1.7e-08 Score=101.86 Aligned_cols=69 Identities=9% Similarity=-0.047 Sum_probs=52.6
Q ss_pred CCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCC---cccceEeCChhH-
Q 044635 738 VNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKP---SKAKYYLDDTVE- 813 (831)
Q Consensus 738 vnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~---s~A~y~l~d~~e- 813 (831)
-.|+.+++.+++++ |++++++++|||+.||++|++.+|. ++.+++.+ ..|+|++++.++
T Consensus 145 Kp~~~~~~~~~~~l---gi~~~~~i~iGD~~nDi~~a~~aG~--------------~~~~~~~~~~~~~a~~v~~~~~el 207 (221)
T 2wf7_A 145 KPAPDIFIAAAHAV---GVAPSESIGLEDSQAGIQAIKDSGA--------------LPIGVGRPEDLGDDIVIVPDTSHY 207 (221)
T ss_dssp TTSSHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTC--------------EEEEESCHHHHCSSSEEESSGGGC
T ss_pred CCChHHHHHHHHHc---CCChhHeEEEeCCHHHHHHHHHCCC--------------EEEEECCHHHhccccchhcCHHhC
Confidence 34556999999998 9999999999999999999999985 34444431 279999987665
Q ss_pred -HHHHHHHHHh
Q 044635 814 -IVRLMQGLAC 823 (831)
Q Consensus 814 -V~~~L~~L~~ 823 (831)
|..+++.+.+
T Consensus 208 ~~~~~~~~~~~ 218 (221)
T 2wf7_A 208 TLEFLKEVWLQ 218 (221)
T ss_dssp CHHHHHHHHHC
T ss_pred CHHHHHHHHhc
Confidence 5666665543
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=98.56 E-value=6.3e-08 Score=99.75 Aligned_cols=74 Identities=8% Similarity=-0.050 Sum_probs=60.5
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCC------cccceEe
Q 044635 735 PQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKP------SKAKYYL 808 (831)
Q Consensus 735 p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~------s~A~y~l 808 (831)
+.+..|+.+++.+++++ |++++++++|||+.||+.|.+.+|.. ++.+..|... ..|+|++
T Consensus 163 ~~~kp~~~~~~~~~~~l---g~~~~~~i~vGD~~~Di~~a~~aG~~-----------~i~v~~~~~~~~~l~~~~ad~v~ 228 (243)
T 3qxg_A 163 KYGKPNPEPYLMALKKG---GLKADEAVVIENAPLGVEAGHKAGIF-----------TIAVNTGPLDGQVLLDAGADLLF 228 (243)
T ss_dssp SSCTTSSHHHHHHHHHT---TCCGGGEEEEECSHHHHHHHHHTTCE-----------EEEECCSSSCHHHHHHTTCSEEE
T ss_pred CCCCCChHHHHHHHHHc---CCCHHHeEEEeCCHHHHHHHHHCCCE-----------EEEEeCCCCCHHHHHhcCCCEEE
Confidence 56778889999999998 99999999999999999999999852 1233333321 3699999
Q ss_pred CChhHHHHHHHHHH
Q 044635 809 DDTVEIVRLMQGLA 822 (831)
Q Consensus 809 ~d~~eV~~~L~~L~ 822 (831)
++..++.++|+.|.
T Consensus 229 ~s~~el~~~l~~li 242 (243)
T 3qxg_A 229 PSMQTLCDSWDTIM 242 (243)
T ss_dssp SCHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHhhh
Confidence 99999999999873
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=98.56 E-value=1.1e-06 Score=87.24 Aligned_cols=69 Identities=16% Similarity=0.055 Sum_probs=50.3
Q ss_pred HHHHHHHHHhcCceeEEecCCCccCCCC---------------------CCCCCCCHHHHHHHHHHhhcCCCeEEEECCC
Q 044635 561 MEHIVSAYKRTTTRAILLDYDGTLMPQA---------------------SIDKSPNSKTIDILNSLCRDKNNMVFLVSAK 619 (831)
Q Consensus 561 ~~~~~~~y~~s~~rli~~D~DGTLl~~~---------------------~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR 619 (831)
.+.+...-....+|+|+||+||||++.. .....+.+.+.++|++|.+ .|..++|+||+
T Consensus 15 ~~~~~~~~m~~~~k~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~-~G~~v~ivT~~ 93 (187)
T 2wm8_A 15 TENLYFQSMARLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQS-LGVPGAAASRT 93 (187)
T ss_dssp HHHHHHHHHHTSCSEEEECSBTTTBSSCTTTSSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHHHH-HTCCEEEEECC
T ss_pred CchhHHHHHHhccCEEEEcCCCCcchHHHhhccCcchhhhcccchhhccCcccCcchhHHHHHHHHHH-CCceEEEEeCC
Confidence 3334333333467999999999999521 0223567899999999987 49999999999
Q ss_pred C-HhhHHHHhCC
Q 044635 620 S-RKTLAEWFSP 630 (831)
Q Consensus 620 ~-~~~l~~~~~~ 630 (831)
+ ...+..++..
T Consensus 94 ~~~~~~~~~l~~ 105 (187)
T 2wm8_A 94 SEIEGANQLLEL 105 (187)
T ss_dssp SCHHHHHHHHHH
T ss_pred CChHHHHHHHHH
Confidence 9 6777777754
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.53 E-value=6.5e-08 Score=97.54 Aligned_cols=65 Identities=9% Similarity=-0.046 Sum_probs=50.8
Q ss_pred CCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEe-CCC----CcccceEeCChh
Q 044635 738 VNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTV-GRK----PSKAKYYLDDTV 812 (831)
Q Consensus 738 vnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~v-G~~----~s~A~y~l~d~~ 812 (831)
..|+.+++.+++++ |++++++++|||+.||++|++.+|... ..+.- ++. +..|+|++++.+
T Consensus 150 kp~~~~~~~~~~~~---~i~~~~~i~iGD~~nDi~~a~~aG~~~-----------~~~~~~~~~~~~~~~~a~~v~~~~~ 215 (226)
T 1te2_A 150 KPHPQVYLDCAAKL---GVDPLTCVALEDSVNGMIASKAARMRS-----------IVVPAPEAQNDPRFVLANVKLSSLT 215 (226)
T ss_dssp TTSTHHHHHHHHHH---TSCGGGEEEEESSHHHHHHHHHTTCEE-----------EECCCTTTTTCGGGGGSSEECSCGG
T ss_pred CCChHHHHHHHHHc---CCCHHHeEEEeCCHHHHHHHHHcCCEE-----------EEEcCCCCcccccccccCeEECCHH
Confidence 34499999999999 999999999999999999999998531 11111 222 467899999988
Q ss_pred HHHH
Q 044635 813 EIVR 816 (831)
Q Consensus 813 eV~~ 816 (831)
++..
T Consensus 216 el~~ 219 (226)
T 1te2_A 216 ELTA 219 (226)
T ss_dssp GCCH
T ss_pred HHhH
Confidence 8755
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.53 E-value=3.7e-07 Score=95.87 Aligned_cols=208 Identities=14% Similarity=0.078 Sum_probs=113.0
Q ss_pred ceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhC---CC----CCceEEecCCEEEE
Q 044635 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFS---PC----ENLGIAAEHGYFFR 645 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~---~~----~~~~liaenGa~i~ 645 (831)
.|+|++|+||||++ ....+ +.+.++|++|.+ .|..|+++|||+......+.. .+ ....+++.||+.+.
T Consensus 1 ik~i~~D~DGtL~~---~~~~~-~~~~~~l~~l~~-~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~i~~~~~~~~~ 75 (263)
T 1zjj_A 1 MVAIIFDMDGVLYR---GNRAI-PGVRELIEFLKE-RGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIITSGLATRL 75 (263)
T ss_dssp CEEEEEECBTTTEE---TTEEC-TTHHHHHHHHHH-HTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGGEEEHHHHHHH
T ss_pred CeEEEEeCcCceEe---CCEeC-ccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEEecHHHHHH
Confidence 47999999999998 34434 788999999977 499999999999755444332 22 12467788877543
Q ss_pred eC-----CCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEee------c-cceEEEeeccCCCccchHHHHHHHHHH
Q 044635 646 LR-----RDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIED------K-ETALVWSYEDADPDFGSCQAKELLDHL 713 (831)
Q Consensus 646 ~~-----~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~------k-~~~l~~~~~~~d~~~~~~~a~el~~~L 713 (831)
.- ....+. .- . +.+...++.+--.... ... + ...+...+ +.......+.+++..|
T Consensus 76 ~l~~~~~~~~v~v-iG---~----~~l~~~l~~~G~~~~~--~~~~~~~~~~~~~~v~~g~---~~~~~~~~~~~~l~~L 142 (263)
T 1zjj_A 76 YMSKHLDPGKIFV-IG---G----EGLVKEMQALGWGIVT--LDEARQGSWKEVKHVVVGL---DPDLTYEKLKYATLAI 142 (263)
T ss_dssp HHHHHSCCCCEEE-ES---C----HHHHHHHHHHTSCBCC--HHHHHTTGGGGCCEEEECC---CTTCBHHHHHHHHHHH
T ss_pred HHHHhCCCCEEEE-Ec---C----HHHHHHHHHcCCeecc--CCcccccccCCCCEEEEec---CCCCCHHHHHHHHHHH
Confidence 21 111121 11 1 2233344433111000 000 0 11111112 1112222345555555
Q ss_pred HhHhcCCCeEEEEcCe--EE---EEEeC-------------------CCCHHHHHHHHHHHhhhcCCCcccEEEEcCCc-
Q 044635 714 ESVLANEPVTVKSGQN--LV---EVKPQ-------------------GVNKGLVAKRLLSTMQEREMLPDFVLCVGDDR- 768 (831)
Q Consensus 714 ~~~l~~~~v~v~~g~~--~v---EV~p~-------------------gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~- 768 (831)
. .+..+ +.++.. +. .+.+. +--+....+.+++. ++++++++|||+.
T Consensus 143 ~---~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~-----~~~~~~~~VGD~~~ 213 (263)
T 1zjj_A 143 R---NGATF-IGTNPDATLPGEEGIYPGAGSIIAALKVATNVEPIIIGKPNEPMYEVVREM-----FPGEELWMVGDRLD 213 (263)
T ss_dssp H---TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHH-----STTCEEEEEESCTT
T ss_pred H---CCCEE-EEECCCccccCCCCCcCCcHHHHHHHHHHhCCCccEecCCCHHHHHHHHHh-----CCcccEEEECCChH
Confidence 4 23333 333221 11 12222 11123344444443 6789999999995
Q ss_pred hhHHHHHHcchhcCCCCCCCCCceEEEEeCCCC----------cccceEeCChhHHHHHHHH
Q 044635 769 SDEDMFEVIISSMAGPSIAPRAEVFACTVGRKP----------SKAKYYLDDTVEIVRLMQG 820 (831)
Q Consensus 769 NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~----------s~A~y~l~d~~eV~~~L~~ 820 (831)
+|+.+-+.+|. .++.|.... ..++|++++..++.++|+.
T Consensus 214 ~Di~~A~~aG~-------------~~i~v~~g~~~~~~~~~~~~~p~~~~~~l~el~~~l~~ 262 (263)
T 1zjj_A 214 TDIAFAKKFGM-------------KAIMVLTGVSSLEDIKKSEYKPDLVLPSVYELIDYLKT 262 (263)
T ss_dssp THHHHHHHTTC-------------EEEEESSSSCCHHHHTTCSSCCSEEESSGGGGGGGGC-
T ss_pred HHHHHHHHcCC-------------eEEEECCCCCChHHHHhcCCCCCEEECCHHHHHHHHhh
Confidence 99999999874 355553221 1688999999998877654
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=98.53 E-value=5.8e-08 Score=101.09 Aligned_cols=74 Identities=12% Similarity=0.099 Sum_probs=59.9
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCC----------cccc
Q 044635 736 QGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKP----------SKAK 805 (831)
Q Consensus 736 ~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~----------s~A~ 805 (831)
.+..|+.+++.+++.+ |++++++++|||+.||+.|.+.+|.. ++.|..|... ..|+
T Consensus 166 ~~Kp~~~~~~~~~~~l---gi~~~~~i~iGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~ad 231 (259)
T 4eek_A 166 RGKPHPDLYTFAAQQL---GILPERCVVIEDSVTGGAAGLAAGAT-----------LWGLLVPGHPHPDGAAALSRLGAA 231 (259)
T ss_dssp CCTTSSHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEECCTTSCCSSCHHHHHHHTCS
T ss_pred CCCCChHHHHHHHHHc---CCCHHHEEEEcCCHHHHHHHHHCCCE-----------EEEEccCCCcccccHHHHHhcCcc
Confidence 5666799999999998 99999999999999999999999852 2334334221 4589
Q ss_pred eEeCChhHHHHHHHHHHh
Q 044635 806 YYLDDTVEIVRLMQGLAC 823 (831)
Q Consensus 806 y~l~d~~eV~~~L~~L~~ 823 (831)
|++++..++.++|+....
T Consensus 232 ~vi~~l~el~~~l~~~~~ 249 (259)
T 4eek_A 232 RVLTSHAELRAALAEAGL 249 (259)
T ss_dssp EEECSHHHHHHHHHHTTS
T ss_pred hhhCCHHHHHHHHHhccc
Confidence 999999999999987543
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=98.52 E-value=1.7e-07 Score=96.32 Aligned_cols=72 Identities=10% Similarity=-0.068 Sum_probs=55.9
Q ss_pred CCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----Cccc-ceEeCCh
Q 044635 737 GVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKA-KYYLDDT 811 (831)
Q Consensus 737 gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A-~y~l~d~ 811 (831)
+-.|..+++.+++.+ |++++++++|||+.||+.|.+.+|.. ++.|..|.. ...| +|++++.
T Consensus 160 ~Kp~~~~~~~~~~~~---~~~~~~~~~iGD~~~Di~~a~~aG~~-----------~~~v~~~~~~~~~~~~~~~~~~~~~ 225 (240)
T 2no4_A 160 YKPDPRIYQFACDRL---GVNPNEVCFVSSNAWDLGGAGKFGFN-----------TVRINRQGNPPEYEFAPLKHQVNSL 225 (240)
T ss_dssp CTTSHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHHTCE-----------EEEECTTCCCCCCTTSCCSEEESSG
T ss_pred CCCCHHHHHHHHHHc---CCCcccEEEEeCCHHHHHHHHHCCCE-----------EEEECCCCCCCcccCCCCceeeCCH
Confidence 345778889999998 99999999999999999999999853 234444532 2357 8999999
Q ss_pred hHHHHHHHHHH
Q 044635 812 VEIVRLMQGLA 822 (831)
Q Consensus 812 ~eV~~~L~~L~ 822 (831)
.++..+|+.+.
T Consensus 226 ~el~~~l~~~~ 236 (240)
T 2no4_A 226 SELWPLLAKNV 236 (240)
T ss_dssp GGHHHHHCC--
T ss_pred HHHHHHHHHhh
Confidence 99999887654
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.50 E-value=1.6e-07 Score=95.39 Aligned_cols=74 Identities=8% Similarity=-0.086 Sum_probs=57.6
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEe-CCC----CcccceEeC
Q 044635 735 PQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTV-GRK----PSKAKYYLD 809 (831)
Q Consensus 735 p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~v-G~~----~s~A~y~l~ 809 (831)
+.+..|+.+++.+++++ |++++++++|||+.||+.|.+.+|... +.+.- |+. +..|+|+++
T Consensus 149 ~~~kp~~~~~~~~~~~~---~~~~~~~~~iGD~~~Di~~a~~aG~~~-----------~~~~~~~~~~~~~~~~~~~~~~ 214 (230)
T 3um9_A 149 RLFKPHQKVYELAMDTL---HLGESEILFVSCNSWDATGAKYFGYPV-----------CWINRSNGVFDQLGVVPDIVVS 214 (230)
T ss_dssp TCCTTCHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHHTCCE-----------EEECTTSCCCCCSSCCCSEEES
T ss_pred ccCCCChHHHHHHHHHh---CCCcccEEEEeCCHHHHHHHHHCCCEE-----------EEEeCCCCccccccCCCcEEeC
Confidence 45566799999999999 999999999999999999999998631 22222 222 357899999
Q ss_pred ChhHHHHHHHHHH
Q 044635 810 DTVEIVRLMQGLA 822 (831)
Q Consensus 810 d~~eV~~~L~~L~ 822 (831)
+..++.++|+.+-
T Consensus 215 ~~~el~~~l~~~~ 227 (230)
T 3um9_A 215 DVGVLASRFSPVD 227 (230)
T ss_dssp SHHHHHHTCCC--
T ss_pred CHHHHHHHHHHhh
Confidence 9999998877653
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.48 E-value=2.4e-07 Score=94.02 Aligned_cols=78 Identities=13% Similarity=0.048 Sum_probs=62.2
Q ss_pred EeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCC-C-----CcccceE
Q 044635 734 KPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGR-K-----PSKAKYY 807 (831)
Q Consensus 734 ~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~-~-----~s~A~y~ 807 (831)
.+.+..|+.+++.+++.+ |++++++++|||+.||+.|++.+|.. .+.|+.|. . ...|+|+
T Consensus 143 ~~~~kp~~~~~~~~~~~l---~~~~~~~i~iGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~l~~~~ad~v 208 (233)
T 3s6j_A 143 VSYGKPDPDLFLAAAKKI---GAPIDECLVIGDAIWDMLAARRCKAT-----------GVGLLSGGYDIGELERAGALRV 208 (233)
T ss_dssp SSCCTTSTHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHTTCE-----------EEEEGGGSCCHHHHHHTTCSEE
T ss_pred CCCCCCChHHHHHHHHHh---CCCHHHEEEEeCCHHhHHHHHHCCCE-----------EEEEeCCCCchHhHHhcCCCEE
Confidence 355778899999999998 99999999999999999999999852 24555563 2 2349999
Q ss_pred eCChhHHHHHHHHHHhhh
Q 044635 808 LDDTVEIVRLMQGLACVA 825 (831)
Q Consensus 808 l~d~~eV~~~L~~L~~~~ 825 (831)
+++..++.++|+.....+
T Consensus 209 ~~~~~el~~~l~~~~~~~ 226 (233)
T 3s6j_A 209 YEDPLDLLNHLDEIASRE 226 (233)
T ss_dssp ESSHHHHHHTGGGTCC--
T ss_pred ECCHHHHHHHHHHHhhhc
Confidence 999999999887765443
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=98.48 E-value=1.6e-07 Score=88.96 Aligned_cols=69 Identities=17% Similarity=0.225 Sum_probs=51.4
Q ss_pred CceeEEecCCCccCCCCC-CCCCCCHHHHHHHHHHhhcCCCeEEEECCCC---HhhHHHHhCCC-CCceEEecCC
Q 044635 572 TTRAILLDYDGTLMPQAS-IDKSPNSKTIDILNSLCRDKNNMVFLVSAKS---RKTLAEWFSPC-ENLGIAAEHG 641 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~-~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~---~~~l~~~~~~~-~~~~liaenG 641 (831)
+.++|++|+||||++... ....+.+.++++|++|.+ .|+.|+|+|||+ ...+..|+... .....++.|+
T Consensus 2 ~~k~i~~DlDGTL~~~~~~~i~~~~~~~~~al~~l~~-~G~~iii~TgR~~~~~~~~~~~l~~~gi~~~~I~~n~ 75 (142)
T 2obb_A 2 NAMTIAVDFDGTIVEHRYPRIGEEIPFAVETLKLLQQ-EKHRLILWSVREGELLDEAIEWCRARGLEFYAANKDY 75 (142)
T ss_dssp CCCEEEECCBTTTBCSCTTSCCCBCTTHHHHHHHHHH-TTCEEEECCSCCHHHHHHHHHHHHTTTCCCSEESSSS
T ss_pred CCeEEEEECcCCCCCCCCccccccCHHHHHHHHHHHH-CCCEEEEEeCCCcccHHHHHHHHHHcCCCeEEEEcCC
Confidence 468999999999998321 112345789999999976 699999999998 56777787665 2345666664
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.43 E-value=4.3e-08 Score=103.62 Aligned_cols=66 Identities=8% Similarity=-0.044 Sum_probs=53.2
Q ss_pred eCCCCHHHHHHHHHHHhhhcCC-------CcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC-----Cc
Q 044635 735 PQGVNKGLVAKRLLSTMQEREM-------LPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK-----PS 802 (831)
Q Consensus 735 p~gvnKG~al~~Ll~~l~~~g~-------~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~-----~s 802 (831)
+.+..|+.+++.+++++ |+ +++++++|||+.||++|++.+|.. ++.|+.|.. ..
T Consensus 167 ~~~kp~~~~~~~~~~~l---gi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~-----------~i~v~~~~~~~~~~~~ 232 (275)
T 2qlt_A 167 KQGKPHPEPYLKGRNGL---GFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCK-----------IVGIATTFDLDFLKEK 232 (275)
T ss_dssp SSCTTSSHHHHHHHHHT---TCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCE-----------EEEESSSSCHHHHTTS
T ss_pred CCCCCChHHHHHHHHHc---CCCccccCCCcceEEEEeCCHHHHHHHHHcCCE-----------EEEECCCCCHHHHhhC
Confidence 56778999999999998 89 999999999999999999999853 234444543 33
Q ss_pred ccceEeCChhHH
Q 044635 803 KAKYYLDDTVEI 814 (831)
Q Consensus 803 ~A~y~l~d~~eV 814 (831)
.|+|++++.+++
T Consensus 233 ~ad~v~~~~~el 244 (275)
T 2qlt_A 233 GCDIIVKNHESI 244 (275)
T ss_dssp SCSEEESSGGGE
T ss_pred CCCEEECChHHc
Confidence 689999887764
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.43 E-value=8.9e-07 Score=96.52 Aligned_cols=71 Identities=15% Similarity=0.103 Sum_probs=58.3
Q ss_pred CCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC---CcccceEe--CChh
Q 044635 738 VNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK---PSKAKYYL--DDTV 812 (831)
Q Consensus 738 vnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~---~s~A~y~l--~d~~ 812 (831)
-.|+.+++++++.+ |++++++++|||+.||++|++.+|. +|++... +..|++++ ++.+
T Consensus 244 kpk~~~~~~~~~~l---gi~~~~~v~vGDs~nDi~~a~~aG~--------------~va~~~~~~~~~~a~~v~~~~~l~ 306 (335)
T 3n28_A 244 QTKADILLTLAQQY---DVEIHNTVAVGDGANDLVMMAAAGL--------------GVAYHAKPKVEAKAQTAVRFAGLG 306 (335)
T ss_dssp HHHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE--------------EEEESCCHHHHTTSSEEESSSCTH
T ss_pred hhhHHHHHHHHHHc---CCChhhEEEEeCCHHHHHHHHHCCC--------------eEEeCCCHHHHhhCCEEEecCCHH
Confidence 47999999999999 9999999999999999999999984 5566322 45778876 5789
Q ss_pred HHHHHHHHHHhhh
Q 044635 813 EIVRLMQGLACVA 825 (831)
Q Consensus 813 eV~~~L~~L~~~~ 825 (831)
+|+.+|+......
T Consensus 307 ~v~~~L~~~l~~~ 319 (335)
T 3n28_A 307 GVVCILSAALVAQ 319 (335)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHhHHHHh
Confidence 9999998876543
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=98.43 E-value=9.4e-08 Score=97.52 Aligned_cols=72 Identities=8% Similarity=-0.051 Sum_probs=53.9
Q ss_pred CCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCce-EEEEeCCC-----CcccceEeCC
Q 044635 737 GVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEV-FACTVGRK-----PSKAKYYLDD 810 (831)
Q Consensus 737 gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~-~~v~vG~~-----~s~A~y~l~d 810 (831)
+-.|..+++.+++.+ |++++++++|||+.||+.|.+.+|.. . +.|.-|.. ...++|++++
T Consensus 136 ~KP~~~~~~~~~~~~---~i~~~~~~~VGD~~~Di~~a~~aG~~-----------~~i~v~~g~~~~~~~~~~~~~~i~~ 201 (218)
T 2o2x_A 136 RKPNPGMLVEAGKRL---ALDLQRSLIVGDKLADMQAGKRAGLA-----------QGWLVDGEAAVQPGFAIRPLRDSSE 201 (218)
T ss_dssp STTSCHHHHHHHHHH---TCCGGGCEEEESSHHHHHHHHHTTCS-----------EEEEETCCCEEETTEEEEEESSHHH
T ss_pred CCCCHHHHHHHHHHc---CCCHHHEEEEeCCHHHHHHHHHCCCC-----------EeEEEecCCCCcccccCCCCEeccc
Confidence 444667888999988 99999999999999999999999852 1 22322321 2357777888
Q ss_pred hhHHHHHHHHHH
Q 044635 811 TVEIVRLMQGLA 822 (831)
Q Consensus 811 ~~eV~~~L~~L~ 822 (831)
..++..+|+.+.
T Consensus 202 l~el~~~l~~~~ 213 (218)
T 2o2x_A 202 LGDLLAAIETLG 213 (218)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHHHh
Confidence 888888887664
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.42 E-value=5.2e-07 Score=91.74 Aligned_cols=72 Identities=10% Similarity=-0.067 Sum_probs=56.0
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEe-CCC----CcccceEeCC
Q 044635 736 QGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTV-GRK----PSKAKYYLDD 810 (831)
Q Consensus 736 ~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~v-G~~----~s~A~y~l~d 810 (831)
.+-.|..+++.+++.+ |++++++++|||+.||+.|.+.+|... +.|.- |+. +..|+|++++
T Consensus 153 ~~kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~~G~~~-----------~~v~~~~~~~~~~~~~~~~v~~~ 218 (233)
T 3umb_A 153 LYKTAPAAYALAPRAF---GVPAAQILFVSSNGWDACGATWHGFTT-----------FWINRLGHPPEALDVAPAAAGHD 218 (233)
T ss_dssp CCTTSHHHHTHHHHHH---TSCGGGEEEEESCHHHHHHHHHHTCEE-----------EEECTTCCCCCSSSCCCSEEESS
T ss_pred CCCcCHHHHHHHHHHh---CCCcccEEEEeCCHHHHHHHHHcCCEE-----------EEEcCCCCCchhccCCCCEEECC
Confidence 3445678899999998 999999999999999999999998531 11221 332 3469999999
Q ss_pred hhHHHHHHHHH
Q 044635 811 TVEIVRLMQGL 821 (831)
Q Consensus 811 ~~eV~~~L~~L 821 (831)
..++.++|+..
T Consensus 219 ~~el~~~l~~~ 229 (233)
T 3umb_A 219 MRDLLQFVQAR 229 (233)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHHHHHHHHh
Confidence 99999998764
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.42 E-value=6.3e-08 Score=98.08 Aligned_cols=65 Identities=17% Similarity=0.176 Sum_probs=52.5
Q ss_pred CCHHHHHHHHHHHhhhcCCCcccEEEEcCCc-hhHHHHHHcchhcCCCCCCCCCceEEEEe------CCC-----Ccccc
Q 044635 738 VNKGLVAKRLLSTMQEREMLPDFVLCVGDDR-SDEDMFEVIISSMAGPSIAPRAEVFACTV------GRK-----PSKAK 805 (831)
Q Consensus 738 vnKG~al~~Ll~~l~~~g~~~d~vla~GD~~-NDe~Mf~~a~~~~~~~~~~~~~~~~~v~v------G~~-----~s~A~ 805 (831)
-.|+.+++.+++++ |++++++++|||+. ||+.|.+.+|.. ++.| |+. ...|+
T Consensus 157 kpk~~~~~~~~~~l---gi~~~~~i~iGD~~~~Di~~a~~aG~~-------------~v~v~~~~~~g~~~~~~~~~~~d 220 (234)
T 3ddh_A 157 DKTEKEYLRLLSIL---QIAPSELLMVGNSFKSDIQPVLSLGGY-------------GVHIPFEVMWKHEVTETFAHERL 220 (234)
T ss_dssp CCSHHHHHHHHHHH---TCCGGGEEEEESCCCCCCHHHHHHTCE-------------EEECCCCTTCCCC---CCCCTTE
T ss_pred CCCHHHHHHHHHHh---CCCcceEEEECCCcHHHhHHHHHCCCe-------------EEEecCCcccccCCcccccCCCc
Confidence 36999999999999 99999999999996 999999999863 2322 332 23348
Q ss_pred eEeCChhHHHHHH
Q 044635 806 YYLDDTVEIVRLM 818 (831)
Q Consensus 806 y~l~d~~eV~~~L 818 (831)
|++++..|+.++|
T Consensus 221 ~v~~~l~el~~~l 233 (234)
T 3ddh_A 221 KQVKRLDDLLSLL 233 (234)
T ss_dssp EECSSGGGHHHHC
T ss_pred eecccHHHHHHhc
Confidence 8999999998765
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.40 E-value=1.6e-07 Score=96.31 Aligned_cols=72 Identities=22% Similarity=0.236 Sum_probs=60.1
Q ss_pred EEeCCCCHHHHHHHHHHHhhhcCCC-cccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC------Ccccc
Q 044635 733 VKPQGVNKGLVAKRLLSTMQEREML-PDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK------PSKAK 805 (831)
Q Consensus 733 V~p~gvnKG~al~~Ll~~l~~~g~~-~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~------~s~A~ 805 (831)
..+.+..|+.+++.+++.+ |++ ++++++|||+.||+.|.+.+|.. .+.|..|+. +..|+
T Consensus 161 ~~~~~kp~~~~~~~~~~~~---g~~~~~~~i~vGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~ad 226 (240)
T 3sd7_A 161 LDGTRVNKNEVIQYVLDLC---NVKDKDKVIMVGDRKYDIIGAKKIGID-----------SIGVLYGYGSFEEISESEPT 226 (240)
T ss_dssp TTSCCCCHHHHHHHHHHHH---TCCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEESSSSCCHHHHHHHCCS
T ss_pred ccCCCCCCHHHHHHHHHHc---CCCCCCcEEEECCCHHHHHHHHHCCCC-----------EEEEeCCCCCHHHHhhcCCC
Confidence 3466788999999999999 999 99999999999999999999852 245555653 26799
Q ss_pred eEeCChhHHHHHH
Q 044635 806 YYLDDTVEIVRLM 818 (831)
Q Consensus 806 y~l~d~~eV~~~L 818 (831)
|++++..++.++|
T Consensus 227 ~v~~~~~el~~~l 239 (240)
T 3sd7_A 227 YIVENVESIKDIL 239 (240)
T ss_dssp EEESSSTTHHHHH
T ss_pred EEECCHHHHHHHh
Confidence 9999999988776
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.38 E-value=4.9e-07 Score=93.60 Aligned_cols=71 Identities=13% Similarity=0.117 Sum_probs=55.5
Q ss_pred CHHHHHHHHHHHhhhcCCCcccEEEEcCCc-hhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----------Ccccce-
Q 044635 739 NKGLVAKRLLSTMQEREMLPDFVLCVGDDR-SDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----------PSKAKY- 806 (831)
Q Consensus 739 nKG~al~~Ll~~l~~~g~~~d~vla~GD~~-NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----------~s~A~y- 806 (831)
.++.+++.+++.+ |++++++++|||+. ||+.|.+.+|... +.|.-|.. ...|++
T Consensus 163 p~~~~~~~~~~~l---~~~~~~~i~iGD~~~~Di~~a~~aG~~~-----------~~v~~~~~~~~~~~~~~~~~~~~~~ 228 (251)
T 2pke_A 163 KDPQTYARVLSEF---DLPAERFVMIGNSLRSDVEPVLAIGGWG-----------IYTPYAVTWAHEQDHGVAADEPRLR 228 (251)
T ss_dssp CSHHHHHHHHHHH---TCCGGGEEEEESCCCCCCHHHHHTTCEE-----------EECCCC-------------CCTTEE
T ss_pred CCHHHHHHHHHHh---CcCchhEEEECCCchhhHHHHHHCCCEE-----------EEECCCCccccccccccccCCCCee
Confidence 4689999999998 99999999999999 9999999998631 22222211 245787
Q ss_pred EeCChhHHHHHHHHHHh
Q 044635 807 YLDDTVEIVRLMQGLAC 823 (831)
Q Consensus 807 ~l~d~~eV~~~L~~L~~ 823 (831)
++++..++..+|+.+..
T Consensus 229 ~i~~~~el~~~l~~~~~ 245 (251)
T 2pke_A 229 EVPDPSGWPAAVRALDA 245 (251)
T ss_dssp ECSSGGGHHHHHHHHHH
T ss_pred eeCCHHHHHHHHHHhCh
Confidence 89999999999988763
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.33 E-value=5.3e-06 Score=83.25 Aligned_cols=57 Identities=12% Similarity=0.084 Sum_probs=42.6
Q ss_pred cCceeEEecCCCccCCCCCC----------CCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHh
Q 044635 571 TTTRAILLDYDGTLMPQASI----------DKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWF 628 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~~----------~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~ 628 (831)
+..|+||||+||||++.... ...+-+.+.++|+.|.+. |..++|+||++...+.+..
T Consensus 4 ~~~kav~fDlDGTL~d~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~-g~~~~i~T~~~~~~~~~~~ 70 (196)
T 2oda_A 4 PTFPALLFGLSGCLVDFGAQAATSDTPDDEHAQLTPGAQNALKALRDQ-GMPCAWIDELPEALSTPLA 70 (196)
T ss_dssp -CCSCEEEETBTTTBCTTSTTTSCSSCCGGGGSBCTTHHHHHHHHHHH-TCCEEEECCSCHHHHHHHH
T ss_pred CcCCEEEEcCCCceEeccccccchhhcccccCCcCcCHHHHHHHHHHC-CCEEEEEcCChHHHHHHhc
Confidence 35789999999999983210 014568899999999774 9999999998877664443
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=98.33 E-value=2e-06 Score=89.28 Aligned_cols=75 Identities=15% Similarity=0.038 Sum_probs=57.7
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEe------------------
Q 044635 736 QGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTV------------------ 797 (831)
Q Consensus 736 ~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~v------------------ 797 (831)
.+-.|..+++.+++.+ |++++++++|||+.||+.|.+.+|... +.+.-
T Consensus 145 ~~Kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~aG~~~-----------~~~~~~~~~~~~~~l~~g~~~~~ 210 (253)
T 1qq5_A 145 VFKPHPDSYALVEEVL---GVTPAEVLFVSSNGFDVGGAKNFGFSV-----------ARVARLSQEALARELVSGTIAPL 210 (253)
T ss_dssp CCTTSHHHHHHHHHHH---CCCGGGEEEEESCHHHHHHHHHHTCEE-----------EEECCSCHHHHHHHTTSSSCCHH
T ss_pred CCCCCHHHHHHHHHHc---CCCHHHEEEEeCChhhHHHHHHCCCEE-----------EEECCcccchhhhhccccccccc
Confidence 3456778889999998 999999999999999999999998531 22221
Q ss_pred -----CC-----CCcccceEeCChhHHHHHHHHHHhh
Q 044635 798 -----GR-----KPSKAKYYLDDTVEIVRLMQGLACV 824 (831)
Q Consensus 798 -----G~-----~~s~A~y~l~d~~eV~~~L~~L~~~ 824 (831)
|. .+..|+|++++..++..+|+.+...
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~ 247 (253)
T 1qq5_A 211 TMFKALRMREETYAEAPDFVVPALGDLPRLVRGMAGA 247 (253)
T ss_dssp HHHHHHHSSCCTTSCCCSEEESSGGGHHHHHHHHC--
T ss_pred ccccccccccCCCCCCCCeeeCCHHHHHHHHHHhccc
Confidence 10 1356899999999999999888654
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=98.29 E-value=3.4e-05 Score=85.75 Aligned_cols=241 Identities=12% Similarity=0.058 Sum_probs=138.9
Q ss_pred HHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHh--cCCeEeecCHHhHHH
Q 044635 194 IMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALL--NSDLIGFHTFDYARH 271 (831)
Q Consensus 194 i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll--~~dligf~t~~~~~~ 271 (831)
+.+..+| |+|.+|+.-...++ .+..+..++|++ .++.+..+.+. ++.+++.+-+. .+|++-..|....++
T Consensus 89 ~l~~~kP--D~Vlv~gd~~~~~a-alaA~~~~IPv~-h~eaglrs~~~----~~pee~nR~~~~~~a~~~~~~te~~~~~ 160 (385)
T 4hwg_A 89 VLEKEKP--DAVLFYGDTNSCLS-AIAAKRRKIPIF-HMEAGNRCFDQ----RVPEEINRKIIDHISDVNITLTEHARRY 160 (385)
T ss_dssp HHHHHCC--SEEEEESCSGGGGG-HHHHHHTTCCEE-EESCCCCCSCT----TSTHHHHHHHHHHHCSEEEESSHHHHHH
T ss_pred HHHhcCC--cEEEEECCchHHHH-HHHHHHhCCCEE-EEeCCCccccc----cCcHHHHHHHHHhhhceeecCCHHHHHH
Confidence 4455677 89999986555556 454455578874 44444433211 33445555543 379888888888888
Q ss_pred HHHHHHHHhCCeecccCceeeEEEcCEEEEEEEee-cccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcc
Q 044635 272 FLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILP-VGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMD 349 (831)
Q Consensus 272 Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P-~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld 349 (831)
|.. +|... + +|.+.+ +++|.-.+... .....+++++++ +.++.+++..+|..
T Consensus 161 l~~-----~G~~~--~-------------~I~vtGnp~~D~~~~~~~------~~~~~~~~~~lgl~~~~~iLvt~hr~e 214 (385)
T 4hwg_A 161 LIA-----EGLPA--E-------------LTFKSGSHMPEVLDRFMP------KILKSDILDKLSLTPKQYFLISSHREE 214 (385)
T ss_dssp HHH-----TTCCG--G-------------GEEECCCSHHHHHHHHHH------HHHHCCHHHHTTCCTTSEEEEEECCC-
T ss_pred HHH-----cCCCc--C-------------cEEEECCchHHHHHHhhh------hcchhHHHHHcCCCcCCEEEEEeCCch
Confidence 764 34321 1 122222 35554332110 012345677786 44567777888854
Q ss_pred ---cccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHH-hccCCCCCCccEEEecCCCC
Q 044635 350 ---IFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERI-NQTFGKPGYDPVVLIDEPLK 425 (831)
Q Consensus 350 ---~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~I-N~~~g~~~~~pv~~~~~~v~ 425 (831)
..|++..+++|+.++.+++ ++. +|.... + .+++.++ +. +- .+ ....|. +.++++
T Consensus 215 ~~~~~~~l~~ll~al~~l~~~~-~~~----vv~p~~------p---~~~~~l~----~~~~~-~~--~~~~v~-l~~~lg 272 (385)
T 4hwg_A 215 NVDVKNNLKELLNSLQMLIKEY-NFL----IIFSTH------P---RTKKRLE----DLEGF-KE--LGDKIR-FLPAFS 272 (385)
T ss_dssp ----CHHHHHHHHHHHHHHHHH-CCE----EEEEEC------H---HHHHHHH----TSGGG-GG--TGGGEE-ECCCCC
T ss_pred hcCcHHHHHHHHHHHHHHHhcC-CeE----EEEECC------h---HHHHHHH----HHHHH-hc--CCCCEE-EEcCCC
Confidence 4488999999999998766 543 443321 2 1233222 22 10 11 122454 456788
Q ss_pred HHHHHHHHHHcCEeEECCCc---cCCCCCCCCCceEEEecccc-ccccc--CCCceeCCCCHHHHHHHHHHHhcCC
Q 044635 426 FYERIAYYVVAECCLVTAVR---DGSEPSSPKKSMLVVSEFIG-CSPSL--SGAIRVNPWNIDAVSDAMDSALEMA 495 (831)
Q Consensus 426 ~~el~aly~~ADv~vvtS~~---eGma~~~~~~g~lVlSe~~G-~~~~l--~~allVnP~d~~~~A~ai~~aL~m~ 495 (831)
..++..+|+.||+++..|=. |.+++ +.|+|+....+ ..+.+ ..+++|.+ |.+++++++.++|+.+
T Consensus 273 ~~~~~~l~~~adlvvt~SGgv~~EA~al----G~Pvv~~~~~ter~e~v~~G~~~lv~~-d~~~i~~ai~~ll~d~ 343 (385)
T 4hwg_A 273 FTDYVKLQMNAFCILSDSGTITEEASIL----NLPALNIREAHERPEGMDAGTLIMSGF-KAERVLQAVKTITEEH 343 (385)
T ss_dssp HHHHHHHHHHCSEEEECCTTHHHHHHHT----TCCEEECSSSCSCTHHHHHTCCEECCS-SHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCcEEEECCccHHHHHHHc----CCCEEEcCCCccchhhhhcCceEEcCC-CHHHHHHHHHHHHhCh
Confidence 89999999999999977711 22233 34555543322 22333 34566654 8999999999999765
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=98.29 E-value=7.1e-07 Score=90.91 Aligned_cols=74 Identities=9% Similarity=-0.038 Sum_probs=54.7
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeC-CC----CcccceEeC
Q 044635 735 PQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVG-RK----PSKAKYYLD 809 (831)
Q Consensus 735 p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG-~~----~s~A~y~l~ 809 (831)
..+-.|..+++.+++.+ |++++++++|||+.||+.|.+.+|... +.+.-| +. ...|+|+++
T Consensus 148 ~~~Kp~~~~~~~~~~~~---~~~~~~~~~iGD~~~Di~~a~~aG~~~-----------~~~~~~~~~~~~~~~~~~~~~~ 213 (232)
T 1zrn_A 148 QVYKPDNRVYELAEQAL---GLDRSAILFVASNAWDATGARYFGFPT-----------CWINRTGNVFEEMGQTPDWEVT 213 (232)
T ss_dssp TCCTTSHHHHHHHHHHH---TSCGGGEEEEESCHHHHHHHHHHTCCE-----------EEECTTCCCCCSSSCCCSEEES
T ss_pred CCCCCCHHHHHHHHHHc---CCCcccEEEEeCCHHHHHHHHHcCCEE-----------EEEcCCCCCccccCCCCCEEEC
Confidence 34556778999999998 999999999999999999999998531 222222 11 356889999
Q ss_pred ChhHHHHHHHHHH
Q 044635 810 DTVEIVRLMQGLA 822 (831)
Q Consensus 810 d~~eV~~~L~~L~ 822 (831)
+..++..+|+.+.
T Consensus 214 ~~~el~~~l~~~~ 226 (232)
T 1zrn_A 214 SLRAVVELFETAA 226 (232)
T ss_dssp SHHHHHTTC----
T ss_pred CHHHHHHHHHhhc
Confidence 9999988877653
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=98.28 E-value=1.9e-06 Score=91.79 Aligned_cols=141 Identities=17% Similarity=0.216 Sum_probs=102.2
Q ss_pred HHHHHHHHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecC
Q 044635 561 MEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEH 640 (831)
Q Consensus 561 ~~~~~~~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaen 640 (831)
.+.....|.....+++++|+|+++...-.....+.+.+.++|+.|.+ .|..++|+||++...+...+..+ ++-
T Consensus 131 ~~~~~~~~~~~g~~~i~~~~d~~~~~~~~~~~~~~~g~~~~l~~L~~-~g~~~~i~T~~~~~~~~~~l~~~---gl~--- 203 (287)
T 3a1c_A 131 VELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKR-MGIKVGMITGDNWRSAEAISREL---NLD--- 203 (287)
T ss_dssp HHHHHHHHHHTTCEEEEEEETTEEEEEEEEECCBCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHH---TCS---
T ss_pred HHHHHHHHHhCCCeEEEEEECCEEEEEEEeccccchhHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHh---CCc---
Confidence 34566677777789999999999875211234577899999999976 59999999999998887777542 110
Q ss_pred CEEEEeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCC
Q 044635 641 GYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANE 720 (831)
Q Consensus 641 Ga~i~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~ 720 (831)
. .|..
T Consensus 204 ----------~-----------------------------------------~f~~------------------------ 208 (287)
T 3a1c_A 204 ----------L-----------------------------------------VIAE------------------------ 208 (287)
T ss_dssp ----------E-----------------------------------------EECS------------------------
T ss_pred ----------e-----------------------------------------eeee------------------------
Confidence 0 0000
Q ss_pred CeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC
Q 044635 721 PVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK 800 (831)
Q Consensus 721 ~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~ 800 (831)
+.| .+|..+++.+ +.. +++++|||+.||+.|.+.+|. +|++|+.
T Consensus 209 ------------i~~--~~K~~~~~~l-------~~~-~~~~~vGDs~~Di~~a~~ag~--------------~v~~~~~ 252 (287)
T 3a1c_A 209 ------------VLP--HQKSEEVKKL-------QAK-EVVAFVGDGINDAPALAQADL--------------GIAVGSG 252 (287)
T ss_dssp ------------CCT--TCHHHHHHHH-------TTT-CCEEEEECTTTCHHHHHHSSE--------------EEEECCC
T ss_pred ------------cCh--HHHHHHHHHH-------hcC-CeEEEEECCHHHHHHHHHCCe--------------eEEeCCC
Confidence 002 2676666654 566 899999999999999999983 5666653
Q ss_pred ----CcccceEe--CChhHHHHHHH
Q 044635 801 ----PSKAKYYL--DDTVEIVRLMQ 819 (831)
Q Consensus 801 ----~s~A~y~l--~d~~eV~~~L~ 819 (831)
...|++++ ++..++.++|+
T Consensus 253 ~~~~~~~ad~v~~~~~~~~l~~~l~ 277 (287)
T 3a1c_A 253 SDVAVESGDIVLIRDDLRDVVAAIQ 277 (287)
T ss_dssp SCCSSCCSSEEESSSCTHHHHHHHH
T ss_pred CHHHHhhCCEEEeCCCHHHHHHHHH
Confidence 34689999 88999888775
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.27 E-value=1e-06 Score=87.66 Aligned_cols=67 Identities=13% Similarity=0.089 Sum_probs=53.8
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCC-----CCcccceEeC
Q 044635 735 PQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGR-----KPSKAKYYLD 809 (831)
Q Consensus 735 p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~-----~~s~A~y~l~ 809 (831)
..+-.|+.+++.+++++ |++++++++|||+.||+.|.+.+|.. ++.+.. ....|+++++
T Consensus 142 ~~~kp~~~~~~~~~~~~---~~~~~~~~~iGD~~~Di~~a~~aG~~-------------~~~~~~~~~~~~~~~a~~~~~ 205 (214)
T 3e58_A 142 KESKPNPEIYLTALKQL---NVQASRALIIEDSEKGIAAGVAADVE-------------VWAIRDNEFGMDQSAAKGLLD 205 (214)
T ss_dssp SSCTTSSHHHHHHHHHH---TCCGGGEEEEECSHHHHHHHHHTTCE-------------EEEECCSSSCCCCTTSSEEES
T ss_pred cCCCCChHHHHHHHHHc---CCChHHeEEEeccHhhHHHHHHCCCE-------------EEEECCCCccchhccHHHHHH
Confidence 34556788999999999 99999999999999999999999853 333332 2378999999
Q ss_pred ChhHHHHH
Q 044635 810 DTVEIVRL 817 (831)
Q Consensus 810 d~~eV~~~ 817 (831)
+..++.++
T Consensus 206 ~~~el~~~ 213 (214)
T 3e58_A 206 SLTDVLDL 213 (214)
T ss_dssp SGGGGGGG
T ss_pred HHHHHHhh
Confidence 98887654
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.26 E-value=1.2e-07 Score=97.97 Aligned_cols=73 Identities=15% Similarity=0.093 Sum_probs=58.4
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCc--ccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEe
Q 044635 735 PQGVNKGLVAKRLLSTMQEREMLP--DFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYL 808 (831)
Q Consensus 735 p~gvnKG~al~~Ll~~l~~~g~~~--d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l 808 (831)
..+-.|..+++.+++++ |+++ +++++|||+.||+.|.+.+|.. ++.|..|+. +..|+|++
T Consensus 168 ~~~Kp~~~~~~~~~~~l---gi~~~~~~~i~iGD~~~Di~~a~~aG~~-----------~i~v~~~~~~~~~~~~ad~v~ 233 (250)
T 3l5k_A 168 QHGKPDPDIFLACAKRF---SPPPAMEKCLVFEDAPNGVEAALAAGMQ-----------VVMVPDGNLSRDLTTKATLVL 233 (250)
T ss_dssp CSCTTSTHHHHHHHHTS---SSCCCGGGEEEEESSHHHHHHHHHTTCE-----------EEECCCTTSCGGGSTTSSEEC
T ss_pred cCCCCChHHHHHHHHHc---CCCCCcceEEEEeCCHHHHHHHHHcCCE-----------EEEEcCCCCchhhcccccEee
Confidence 44566788999999998 8887 9999999999999999999852 245555653 47899999
Q ss_pred CChhHHHHHHHHH
Q 044635 809 DDTVEIVRLMQGL 821 (831)
Q Consensus 809 ~d~~eV~~~L~~L 821 (831)
++..++...|..|
T Consensus 234 ~sl~el~~~l~~l 246 (250)
T 3l5k_A 234 NSLQDFQPELFGL 246 (250)
T ss_dssp SCGGGCCGGGGTC
T ss_pred cCHHHhhHHHhcC
Confidence 9999887666543
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.26 E-value=7.1e-06 Score=83.56 Aligned_cols=40 Identities=15% Similarity=0.047 Sum_probs=34.7
Q ss_pred CCCHHHHHHHHHHHhhhcC---CCcccEEEEcCCchhHHHHHHcch
Q 044635 737 GVNKGLVAKRLLSTMQERE---MLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 737 gvnKG~al~~Ll~~l~~~g---~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
+..|..+++.+++.+ | +++++++++||+.||++|++.++.
T Consensus 157 ~~~K~~~~~~~~~~~---~~~~~~~~~~~~vGDs~~D~~~~~~ag~ 199 (232)
T 3fvv_A 157 REGKVVRVNQWLAGM---GLALGDFAESYFYSDSVNDVPLLEAVTR 199 (232)
T ss_dssp THHHHHHHHHHHHHT---TCCGGGSSEEEEEECCGGGHHHHHHSSE
T ss_pred chHHHHHHHHHHHHc---CCCcCchhheEEEeCCHhhHHHHHhCCC
Confidence 345777888888877 7 889999999999999999999984
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.25 E-value=1.7e-06 Score=102.62 Aligned_cols=140 Identities=17% Similarity=0.221 Sum_probs=105.3
Q ss_pred HHHHHHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCE
Q 044635 563 HIVSAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGY 642 (831)
Q Consensus 563 ~~~~~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa 642 (831)
...+.+.....+.+++.+||+++..-.....+.+++.+++++|.+ .|..++++||++........+.+. +-
T Consensus 427 ~~~~~~~~~g~~~l~va~~~~~~G~i~~~D~l~~~~~~~i~~L~~-~Gi~v~~~TGd~~~~a~~ia~~lg---i~----- 497 (645)
T 3j08_A 427 LALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKR-MGIKVGMITGDNWRSAEAISRELN---LD----- 497 (645)
T ss_dssp HHHHHHHTTTCCCEEEEETTEEEEEEEEECCCTTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHHT---CS-----
T ss_pred HHHHHHHhcCCeEEEEEECCEEEEEEEecCCchhHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcC---CC-----
Confidence 344556666788999999999875222345678899999999977 599999999999998887765431 10
Q ss_pred EEEeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCe
Q 044635 643 FFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPV 722 (831)
Q Consensus 643 ~i~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v 722 (831)
T Consensus 498 -------------------------------------------------------------------------------- 497 (645)
T 3j08_A 498 -------------------------------------------------------------------------------- 497 (645)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC--
Q 044635 723 TVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK-- 800 (831)
Q Consensus 723 ~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~-- 800 (831)
..+.++.|. +|+.+++.+.+ . +.|+++||+.||.+|++.++ +++++|+.
T Consensus 498 -----~~~~~~~P~--~K~~~v~~l~~-------~-~~v~~vGDg~ND~~al~~A~--------------vgiamg~g~~ 548 (645)
T 3j08_A 498 -----LVIAEVLPH--QKSEEVKKLQA-------K-EVVAFVGDGINDAPALAQAD--------------LGIAVGSGSD 548 (645)
T ss_dssp -----EEECSCCTT--CHHHHHHHHTT-------T-CCEEEEECSSSCHHHHHHSS--------------EEEEECCCSC
T ss_pred -----EEEEeCCHH--hHHHHHHHHhh-------C-CeEEEEeCCHhHHHHHHhCC--------------EEEEeCCCcH
Confidence 011112233 79999988743 2 78999999999999999997 68899874
Q ss_pred --CcccceEe--CChhHHHHHHHH
Q 044635 801 --PSKAKYYL--DDTVEIVRLMQG 820 (831)
Q Consensus 801 --~s~A~y~l--~d~~eV~~~L~~ 820 (831)
+..|++++ ++.+++.++++.
T Consensus 549 ~a~~~AD~vl~~~~~~~i~~~i~~ 572 (645)
T 3j08_A 549 VAVESGDIVLIRDDLRDVVAAIQL 572 (645)
T ss_dssp CSSCCSSSEESSCCTTHHHHHHHH
T ss_pred HHHHhCCEEEecCCHHHHHHHHHH
Confidence 56889998 678888888763
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=98.16 E-value=5.9e-06 Score=82.07 Aligned_cols=68 Identities=12% Similarity=0.052 Sum_probs=51.9
Q ss_pred HHHHHHHHHhhhcCCCcccEEEEcCC-chhHHHHHHcchhcCCCCCCCCCceEEEEeCCCC----------cccceEeC-
Q 044635 742 LVAKRLLSTMQEREMLPDFVLCVGDD-RSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKP----------SKAKYYLD- 809 (831)
Q Consensus 742 ~al~~Ll~~l~~~g~~~d~vla~GD~-~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~----------s~A~y~l~- 809 (831)
...+.+++.+ |++++++++|||+ .+|+.+-+.+|. -+|.+.... ..++++++
T Consensus 101 ~~~~~~~~~~---~~~~~~~l~VGD~~~~Di~~A~~aG~-------------~~i~v~~~~~~~~~~~~~~~~~~~v~~~ 164 (189)
T 3ib6_A 101 TIFDFTLNAL---QIDKTEAVMVGNTFESDIIGANRAGI-------------HAIWLQNPEVCLQDERLPLVAPPFVIPV 164 (189)
T ss_dssp HHHHHHHHHH---TCCGGGEEEEESBTTTTHHHHHHTTC-------------EEEEECCTTTCBCSSCCCBCSSSCEEEE
T ss_pred HHHHHHHHHc---CCCcccEEEECCCcHHHHHHHHHCCC-------------eEEEECCccccccccccccCCCcceecc
Confidence 5567777777 8999999999999 799999999985 244443321 27788888
Q ss_pred -ChhHHHHHHHHHHhhh
Q 044635 810 -DTVEIVRLMQGLACVA 825 (831)
Q Consensus 810 -d~~eV~~~L~~L~~~~ 825 (831)
+..++.++|+.+-.-+
T Consensus 165 ~~l~~l~~~l~l~~~~~ 181 (189)
T 3ib6_A 165 WDLADVPEALLLLKKIS 181 (189)
T ss_dssp SSGGGHHHHHHHHHHHC
T ss_pred ccHHhHHHHHHHHHHhh
Confidence 9999999887654433
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.16 E-value=3.9e-06 Score=100.85 Aligned_cols=140 Identities=18% Similarity=0.240 Sum_probs=105.3
Q ss_pred HHHHHHHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCC
Q 044635 562 EHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHG 641 (831)
Q Consensus 562 ~~~~~~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenG 641 (831)
+...+.+.....+.+++.+||+++..-....++.+++.+++++|.+ .|..++++||++......+...+. +-
T Consensus 504 ~~~~~~~~~~g~~~~~va~~~~~~G~i~i~D~~~~~~~~~i~~l~~-~Gi~v~~~TGd~~~~a~~ia~~lg---i~---- 575 (723)
T 3j09_A 504 ELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKR-MGIKVGMITGDNWRSAEAISRELN---LD---- 575 (723)
T ss_dssp HHHHHHHHTTTCEEEEEEETTEEEEEEEEECCSCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHHT---CS----
T ss_pred HHHHHHHHhcCCeEEEEEECCEEEEEEeecCCcchhHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHcC---Cc----
Confidence 3344556667789999999999885322345678899999999977 599999999999988877765431 10
Q ss_pred EEEEeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCC
Q 044635 642 YFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEP 721 (831)
Q Consensus 642 a~i~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~ 721 (831)
T Consensus 576 -------------------------------------------------------------------------------- 575 (723)
T 3j09_A 576 -------------------------------------------------------------------------------- 575 (723)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC-
Q 044635 722 VTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK- 800 (831)
Q Consensus 722 v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~- 800 (831)
..+.++.|. +|+.+++.+.+ . +.|+++||+.||.+|++.++ +++++|+.
T Consensus 576 ------~~~~~~~P~--~K~~~v~~l~~-------~-~~v~~vGDg~ND~~al~~A~--------------vgiamg~g~ 625 (723)
T 3j09_A 576 ------LVIAEVLPH--QKSEEVKKLQA-------K-EVVAFVGDGINDAPALAQAD--------------LGIAVGSGS 625 (723)
T ss_dssp ------EEECSCCTT--CHHHHHHHHTT-------T-CCEEEEECSSTTHHHHHHSS--------------EEEECCCCS
T ss_pred ------EEEccCCHH--HHHHHHHHHhc-------C-CeEEEEECChhhHHHHhhCC--------------EEEEeCCCc
Confidence 001112232 69999988843 1 67999999999999999997 68888874
Q ss_pred ---CcccceEe--CChhHHHHHHH
Q 044635 801 ---PSKAKYYL--DDTVEIVRLMQ 819 (831)
Q Consensus 801 ---~s~A~y~l--~d~~eV~~~L~ 819 (831)
+..|++++ ++.+++.++++
T Consensus 626 ~~a~~~AD~vl~~~~~~~i~~~i~ 649 (723)
T 3j09_A 626 DVAVESGDIVLIRDDLRDVVAAIQ 649 (723)
T ss_dssp CCSSCCSSEECSSCCTTHHHHHHH
T ss_pred HHHHHhCCEEEeCCCHHHHHHHHH
Confidence 57889998 67888888876
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.09 E-value=4.7e-06 Score=93.62 Aligned_cols=66 Identities=17% Similarity=0.147 Sum_probs=53.4
Q ss_pred CCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC---CcccceEeC--Ch
Q 044635 737 GVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK---PSKAKYYLD--DT 811 (831)
Q Consensus 737 gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~---~s~A~y~l~--d~ 811 (831)
+-.|..+++.+++.+ |++++++++|||+.||++|++.+| ++++++.+ ...|++.++ +.
T Consensus 321 ~kpk~~~~~~~~~~~---gi~~~~~i~vGD~~~Di~~a~~aG--------------~~va~~~~~~~~~~ad~~i~~~~l 383 (415)
T 3p96_A 321 RAGKATALREFAQRA---GVPMAQTVAVGDGANDIDMLAAAG--------------LGIAFNAKPALREVADASLSHPYL 383 (415)
T ss_dssp HHHHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSS--------------EEEEESCCHHHHHHCSEEECSSCT
T ss_pred CcchHHHHHHHHHHc---CcChhhEEEEECCHHHHHHHHHCC--------------CeEEECCCHHHHHhCCEEEccCCH
Confidence 346888999999998 999999999999999999999998 35666444 357888875 67
Q ss_pred hHHHHHHH
Q 044635 812 VEIVRLMQ 819 (831)
Q Consensus 812 ~eV~~~L~ 819 (831)
++++.+|.
T Consensus 384 ~~ll~~l~ 391 (415)
T 3p96_A 384 DTVLFLLG 391 (415)
T ss_dssp THHHHHTT
T ss_pred HHHHHHhC
Confidence 77877664
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=98.07 E-value=3.6e-06 Score=100.91 Aligned_cols=140 Identities=15% Similarity=0.197 Sum_probs=103.6
Q ss_pred HHHHHHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCE
Q 044635 563 HIVSAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGY 642 (831)
Q Consensus 563 ~~~~~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa 642 (831)
...+.+.....+.+++.+||+++..-.....+.+++.+++++|.+ .|+.++++|||+......+.+.+. +.
T Consensus 524 ~~~~~~~~~G~~vl~va~d~~~~G~i~i~D~i~~~~~~aI~~L~~-~Gi~v~mlTGd~~~~a~~ia~~lg---i~----- 594 (736)
T 3rfu_A 524 EKADELRGKGASVMFMAVDGKTVALLVVEDPIKSSTPETILELQQ-SGIEIVMLTGDSKRTAEAVAGTLG---IK----- 594 (736)
T ss_dssp HHHHHHHHTTCEEEEEEETTEEEEEEEEECCBCSSHHHHHHHHHH-HTCEEEEECSSCHHHHHHHHHHHT---CC-----
T ss_pred HHHHHHHhcCCeEEEEEECCEEEEEEEeeccchhhHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHcC---CC-----
Confidence 344566677889999999999885222345678899999999987 499999999999998888776432 10
Q ss_pred EEEeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCe
Q 044635 643 FFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPV 722 (831)
Q Consensus 643 ~i~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v 722 (831)
. .+
T Consensus 595 --------~-----------------------------------------v~---------------------------- 597 (736)
T 3rfu_A 595 --------K-----------------------------------------VV---------------------------- 597 (736)
T ss_dssp --------C-----------------------------------------EE----------------------------
T ss_pred --------E-----------------------------------------EE----------------------------
Confidence 0 00
Q ss_pred EEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC--
Q 044635 723 TVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK-- 800 (831)
Q Consensus 723 ~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~-- 800 (831)
.++.|. +|...++.+.+. .+.|+++||+.||.+||+.++ ++|+||+.
T Consensus 598 --------a~~~P~--~K~~~v~~l~~~-------g~~V~~vGDG~ND~paL~~Ad--------------vGIAmg~g~d 646 (736)
T 3rfu_A 598 --------AEIMPE--DKSRIVSELKDK-------GLIVAMAGDGVNDAPALAKAD--------------IGIAMGTGTD 646 (736)
T ss_dssp --------CSCCHH--HHHHHHHHHHHH-------SCCEEEEECSSTTHHHHHHSS--------------EEEEESSSCS
T ss_pred --------EecCHH--HHHHHHHHHHhc-------CCEEEEEECChHhHHHHHhCC--------------EEEEeCCccH
Confidence 111122 477777777664 256999999999999999997 68999975
Q ss_pred --CcccceEe--CChhHHHHHHH
Q 044635 801 --PSKAKYYL--DDTVEIVRLMQ 819 (831)
Q Consensus 801 --~s~A~y~l--~d~~eV~~~L~ 819 (831)
+..|++++ +|.+++.++++
T Consensus 647 ~a~~~AD~vl~~~~~~~i~~ai~ 669 (736)
T 3rfu_A 647 VAIESAGVTLLHGDLRGIAKARR 669 (736)
T ss_dssp HHHHHCSEEECSCCSTTHHHHHH
T ss_pred HHHHhCCEEEccCCHHHHHHHHH
Confidence 46889988 57788887766
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=98.05 E-value=4.1e-06 Score=77.86 Aligned_cols=50 Identities=20% Similarity=0.357 Sum_probs=40.1
Q ss_pred ceeEEecCCCccCCCCCC---CCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhh
Q 044635 573 TRAILLDYDGTLMPQASI---DKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKT 623 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~---~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~ 623 (831)
+|+|++|+||||++.... ...+++.+.++|++|.+ .|..++|+|||+...
T Consensus 1 ik~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~l~~l~~-~Gi~~~iaTGR~~~~ 53 (126)
T 1xpj_A 1 MKKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQ-LGFEIVISTARNMRT 53 (126)
T ss_dssp CCEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHH-TTCEEEEEECTTTTT
T ss_pred CCEEEEecCCCCCCCCCCccccCCCCHHHHHHHHHHHh-CCCeEEEEeCCChhh
Confidence 479999999999983210 01577999999999977 599999999999754
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.04 E-value=3.7e-06 Score=91.02 Aligned_cols=64 Identities=17% Similarity=0.181 Sum_probs=50.2
Q ss_pred CHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC---CcccceEeC--ChhH
Q 044635 739 NKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK---PSKAKYYLD--DTVE 813 (831)
Q Consensus 739 nKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~---~s~A~y~l~--d~~e 813 (831)
.|..+++.+++.+ |++++++++|||+.||+.|.+.+| +++.++.+ ...|++.+. +..+
T Consensus 246 pkp~~~~~~~~~l---gv~~~~~i~VGDs~~Di~aa~~AG--------------~~va~~~~~~~~~~a~~~i~~~~L~~ 308 (317)
T 4eze_A 246 NKKQTLVDLAARL---NIATENIIACGDGANDLPMLEHAG--------------TGIAWKAKPVVREKIHHQINYHGFEL 308 (317)
T ss_dssp HHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSS--------------EEEEESCCHHHHHHCCEEESSSCGGG
T ss_pred CCHHHHHHHHHHc---CCCcceEEEEeCCHHHHHHHHHCC--------------CeEEeCCCHHHHHhcCeeeCCCCHHH
Confidence 5788889999988 999999999999999999999998 35666544 245677664 6677
Q ss_pred HHHHHH
Q 044635 814 IVRLMQ 819 (831)
Q Consensus 814 V~~~L~ 819 (831)
++.+|+
T Consensus 309 ll~~L~ 314 (317)
T 4eze_A 309 LLFLIE 314 (317)
T ss_dssp GGGGTC
T ss_pred HHHHHH
Confidence 666553
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=97.96 E-value=2.8e-05 Score=97.06 Aligned_cols=165 Identities=18% Similarity=0.192 Sum_probs=94.6
Q ss_pred CCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCceEEEcCCcCCccHHHHHHH
Q 044635 590 IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEP 669 (831)
Q Consensus 590 ~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~ 669 (831)
....+.+++.+++++|.+ .|+.|+++|||+......+...+ ++..+++..+ ..
T Consensus 601 i~Dp~r~~~~~aI~~l~~-aGI~vvmiTGd~~~tA~~ia~~l---gi~~~~~~~i-----------------------~~ 653 (1034)
T 3ixz_A 601 MIDPPRATVPDAVLKCRT-AGIRVIMVTGDHPITAKAIAASV---GIISEGSETV-----------------------ED 653 (1034)
T ss_pred ccCCCchhHHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHc---CCCCCCchHH-----------------------HH
Confidence 345688999999999977 59999999999999998887654 3333222111 11
Q ss_pred HHHHHhccCCCeeEeec-cceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHH
Q 044635 670 VMKLYTETTDGSTIEDK-ETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLL 748 (831)
Q Consensus 670 il~~~~e~~~gs~ie~k-~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll 748 (831)
+.+... .+......+ .......-.. +.....++ +.+.+......+ +..+.|. .|...++.+.
T Consensus 654 ~~~~~~--~~~~~~~~~~~~~~~~~g~~----l~~~~~~~----l~~~~~~~~~~v-----~ar~~P~--~K~~iv~~lq 716 (1034)
T 3ixz_A 654 IAARLR--VPVDQVNRKDARACVINGMQ----LKDMDPSE----LVEALRTHPEMV-----FARTSPQ--QKLVIVESCQ 716 (1034)
T ss_pred HHHhhC--ccchhccccccceeEEecHh----hhhCCHHH----HHHHHHhCCceE-----EEecCHH--HHHHHHHHHH
Confidence 111000 000000000 0001111000 00000112 222222221111 2233443 6888887765
Q ss_pred HHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeC-CC----CcccceEe--CChhHHHHHHH
Q 044635 749 STMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVG-RK----PSKAKYYL--DDTVEIVRLMQ 819 (831)
Q Consensus 749 ~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG-~~----~s~A~y~l--~d~~eV~~~L~ 819 (831)
+. | ..|+++||+.||.+||+.++ ++|+|| +. +..|++++ ++.++++.+++
T Consensus 717 ~~----g---~~V~a~GDG~ND~~mLk~A~--------------vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~ai~ 773 (1034)
T 3ixz_A 717 RL----G---AIVAVTGDGVNDSPALKKAD--------------IGVAMGIAGSDAAKNAADMILLDDNFASIVTGVE 773 (1034)
T ss_pred Hc----C---CEEEEECCcHHhHHHHHHCC--------------eeEEeCCccCHHHHHhcCEEeccCCchHHHHHHH
Confidence 43 3 45999999999999999997 689998 54 57899998 45788888875
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=97.95 E-value=4.2e-05 Score=83.43 Aligned_cols=239 Identities=12% Similarity=0.064 Sum_probs=134.9
Q ss_pred HHHHcCCCCCEEEEeCcccc--chHH-HHHhh-cCCCeEEEEEeccCCChHHhhcCCCh-HHHHHHHhcCCeEeecCHHh
Q 044635 194 IMEVINPEDDFVWVHDYHLM--VLPT-FLRKR-FNRVKLGFFLHSPFPSSEIYKTLPIR-EEILRALLNSDLIGFHTFDY 268 (831)
Q Consensus 194 i~~~~~~~~d~vwvhDyhL~--llp~-~lr~~-~~~~~i~~flH~PfP~~e~f~~lp~r-~eil~~ll~~dligf~t~~~ 268 (831)
+...+++ +|+|.+|=..+. ..+. ++++. ..++|+.++.|-=||-. +..-+.. ..-...+-.||.|..+++..
T Consensus 68 ~~~~~~~-~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~pl~--~~~~~~~~~~E~~~y~~aD~Ii~~S~~~ 144 (339)
T 3rhz_A 68 IVAGLRH-GDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVVPLM--FSGNFYLMDRTIAYYNKADVVVAPSQKM 144 (339)
T ss_dssp HTTTCCT-TCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCHHHH--CGGGGGGHHHHHHHHTTCSEEEESCHHH
T ss_pred HHhcCCC-CCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccHHhh--CccchhhHHHHHHHHHHCCEEEECCHHH
Confidence 4445554 599998744332 1222 34331 23899999999766522 1000011 11122344689999999877
Q ss_pred HHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeeccc-ChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccC
Q 044635 269 ARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGI-HMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDD 347 (831)
Q Consensus 269 ~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GI-d~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdR 347 (831)
.+.+.+ .|+.. .++ .+.++ |... ..+. .. ..++++|+++||
T Consensus 145 ~~~l~~-----~G~~~---------------~ki--~~~~~~~~~~-----~~~~---------~~--~~~~~~i~yaG~ 186 (339)
T 3rhz_A 145 IDKLRD-----FGMNV---------------SKT--VVQGMWDHPT-----QAPM---------FP--AGLKREIHFPGN 186 (339)
T ss_dssp HHHHHH-----TTCCC---------------SEE--EECCSCCCCC-----CCCC---------CC--CEEEEEEEECSC
T ss_pred HHHHHH-----cCCCc---------------Cce--eecCCCCccC-----cccc---------cc--cCCCcEEEEeCC
Confidence 665543 13210 112 22332 1110 0000 01 145689999999
Q ss_pred cccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHH
Q 044635 348 MDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFY 427 (831)
Q Consensus 348 ld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~ 427 (831)
+....++.. + .|+++ |++||... +. + .. .|.| .|.+|.+
T Consensus 187 l~k~~~L~~-------l---~~~~~----f~ivG~G~-----~~----------------~---l~--nV~f-~G~~~~~ 225 (339)
T 3rhz_A 187 PERFSFVKE-------W---KYDIP----LKVYTWQN-----VE----------------L---PQ--NVHK-INYRPDE 225 (339)
T ss_dssp TTTCGGGGG-------C---CCSSC----EEEEESCC-----CC----------------C---CT--TEEE-EECCCHH
T ss_pred cchhhHHHh-------C---CCCCe----EEEEeCCc-----cc----------------C---cC--CEEE-eCCCCHH
Confidence 985332211 1 46666 99999532 21 0 11 4665 5689999
Q ss_pred HHHHHHHHcCEeEECCCccC-----------------CCCCCCCCceEEEeccccccccc---CCCceeCCCCHHHHHHH
Q 044635 428 ERIAYYVVAECCLVTAVRDG-----------------SEPSSPKKSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDA 487 (831)
Q Consensus 428 el~aly~~ADv~vvtS~~eG-----------------ma~~~~~~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~a 487 (831)
|++.+|+.||+.++. .+| ||+ +.|+|++..++.++.+ ..|+.++ +.++++++
T Consensus 226 el~~~l~~~~~~lv~--~~~~~~~y~~~~~P~Kl~eymA~----G~PVI~~~~~~~~~~v~~~~~G~~~~--~~~e~~~~ 297 (339)
T 3rhz_A 226 QLLMEMSQGGFGLVW--MDDKDKEYQSLYCSYKLGSFLAA----GIPVIVQEGIANQELIENNGLGWIVK--DVEEAIMK 297 (339)
T ss_dssp HHHHHHHTEEEEECC--CCGGGHHHHTTCCCHHHHHHHHH----TCCEEEETTCTTTHHHHHHTCEEEES--SHHHHHHH
T ss_pred HHHHHHHhCCEEEEE--CCCchhHHHHhcChHHHHHHHHc----CCCEEEccChhHHHHHHhCCeEEEeC--CHHHHHHH
Confidence 999999999998886 233 344 5578888877666666 3567776 47888888
Q ss_pred HHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHH
Q 044635 488 MDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQD 525 (831)
Q Consensus 488 i~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~ 525 (831)
|..+ .++++....+..++...+....+.+++.+.+
T Consensus 298 i~~l---~~~~~~~m~~na~~~a~~~~~~~f~k~~l~~ 332 (339)
T 3rhz_A 298 VKNV---NEDEYIELVKNVRSFNPILRKGFFTRRLLTE 332 (339)
T ss_dssp HHHC---CHHHHHHHHHHHHHHTHHHHTTHHHHHHHHH
T ss_pred HHHh---CHHHHHHHHHHHHHHHHHhhccHHHHHHHHH
Confidence 8753 4566655555555554444434444444433
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.93 E-value=2e-05 Score=72.97 Aligned_cols=52 Identities=15% Similarity=0.190 Sum_probs=41.7
Q ss_pred ceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhC
Q 044635 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFS 629 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~ 629 (831)
.|+|++|+||||.. ...+.+.+.++|++|.+ .|..++|+|+++...+...+.
T Consensus 2 ~k~i~~D~DgtL~~----~~~~~~~~~~~l~~L~~-~G~~~~i~S~~~~~~~~~~l~ 53 (137)
T 2pr7_A 2 MRGLIVDYAGVLDG----TDEDQRRWRNLLAAAKK-NGVGTVILSNDPGGLGAAPIR 53 (137)
T ss_dssp CCEEEECSTTTTSS----CHHHHHHHHHHHHHHHH-TTCEEEEEECSCCGGGGHHHH
T ss_pred CcEEEEeccceecC----CCccCccHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHH
Confidence 57999999999954 44567889999999977 599999999998776555443
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=97.93 E-value=0.00018 Score=75.96 Aligned_cols=56 Identities=16% Similarity=0.232 Sum_probs=44.9
Q ss_pred cCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECC---CCHhhHHHHhCCC
Q 044635 571 TTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSA---KSRKTLAEWFSPC 631 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG---R~~~~l~~~~~~~ 631 (831)
.++|+|+||+||||++ .. .+.+.+.++|++|.+ .|..|+++|| |+...+.+.+..+
T Consensus 12 ~~~k~i~~D~DGtL~~---~~-~~~~~~~~~l~~l~~-~g~~~~~~Tn~~~r~~~~~~~~l~~l 70 (284)
T 2hx1_A 12 PKYKCIFFDAFGVLKT---YN-GLLPGIENTFDYLKA-QGQDYYIVTNDASRSPEQLADSYHKL 70 (284)
T ss_dssp GGCSEEEECSBTTTEE---TT-EECTTHHHHHHHHHH-TTCEEEEEECCCSSCHHHHHHHHHHT
T ss_pred hcCCEEEEcCcCCcCc---CC-eeChhHHHHHHHHHH-CCCEEEEEeCCCCcCHHHHHHHHHHC
Confidence 3579999999999998 33 355788999999977 5999999995 8887777766543
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.87 E-value=2e-05 Score=79.56 Aligned_cols=74 Identities=11% Similarity=-0.007 Sum_probs=62.1
Q ss_pred EeCC--CCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCCc---------
Q 044635 734 KPQG--VNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPS--------- 802 (831)
Q Consensus 734 ~p~g--vnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~s--------- 802 (831)
.+.+ .+|+.+++.+++++ |++++++++|||+.||++|++.+|.. ++.+++...
T Consensus 137 ~~~~~~kpk~~~~~~~~~~l---~~~~~~~i~iGD~~~Di~~a~~aG~~-------------~i~~~~~~~~~~~~~~~l 200 (229)
T 2fdr_A 137 LGADRVKPKPDIFLHGAAQF---GVSPDRVVVVEDSVHGIHGARAAGMR-------------VIGFTGASHTYPSHADRL 200 (229)
T ss_dssp HCTTCCTTSSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHTTCE-------------EEEECCSTTCCTTHHHHH
T ss_pred cccCCCCcCHHHHHHHHHHc---CCChhHeEEEcCCHHHHHHHHHCCCE-------------EEEEecCCccchhhhHHH
Confidence 3677 89999999999999 99999999999999999999999852 355554322
Q ss_pred ---ccceEeCChhHHHHHHHHHHh
Q 044635 803 ---KAKYYLDDTVEIVRLMQGLAC 823 (831)
Q Consensus 803 ---~A~y~l~d~~eV~~~L~~L~~ 823 (831)
.|+|++++..++.+.|+.+..
T Consensus 201 ~~~~ad~v~~~~~el~~~l~~~~~ 224 (229)
T 2fdr_A 201 TDAGAETVISRMQDLPAVIAAMAE 224 (229)
T ss_dssp HHHTCSEEESCGGGHHHHHHHHTC
T ss_pred hhcCCceeecCHHHHHHHHHHhhh
Confidence 289999999999999988743
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=97.87 E-value=2.1e-05 Score=79.73 Aligned_cols=62 Identities=24% Similarity=0.358 Sum_probs=47.4
Q ss_pred CHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCC------cccceEeCChh
Q 044635 739 NKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKP------SKAKYYLDDTV 812 (831)
Q Consensus 739 nKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~------s~A~y~l~d~~ 812 (831)
.|..+++++++.+ |+ +.+++|||+.||+.|.+.+| ++|.+|... ..|++++++..
T Consensus 157 ~Kp~~~~~~~~~~---~~--~~~~~vGDs~~Di~~a~~ag--------------~~i~~~~~~~~~~~~~~~~~~~~~~~ 217 (225)
T 1nnl_A 157 GKGKVIKLLKEKF---HF--KKIIMIGDGATDMEACPPAD--------------AFIGFGGNVIRQQVKDNAKWYITDFV 217 (225)
T ss_dssp HHHHHHHHHHHHH---CC--SCEEEEESSHHHHTTTTTSS--------------EEEEECSSCCCHHHHHHCSEEESCGG
T ss_pred chHHHHHHHHHHc---CC--CcEEEEeCcHHhHHHHHhCC--------------eEEEecCccccHHHHhcCCeeecCHH
Confidence 5888899998887 66 78999999999999988876 256666431 35888999988
Q ss_pred HHHHHHH
Q 044635 813 EIVRLMQ 819 (831)
Q Consensus 813 eV~~~L~ 819 (831)
++.++|+
T Consensus 218 el~~~l~ 224 (225)
T 1nnl_A 218 ELLGELE 224 (225)
T ss_dssp GGCC---
T ss_pred HHHHHHh
Confidence 8876654
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=97.75 E-value=3.1e-05 Score=80.49 Aligned_cols=77 Identities=16% Similarity=0.179 Sum_probs=63.8
Q ss_pred EEeCCCCHHHHHHHHHHHhhhcCCCc-ccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC-----------
Q 044635 733 VKPQGVNKGLVAKRLLSTMQEREMLP-DFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----------- 800 (831)
Q Consensus 733 V~p~gvnKG~al~~Ll~~l~~~g~~~-d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----------- 800 (831)
..+.+.+|+.+++.+++++ |+++ +++++|||+.||++|++.+|.. +++|+.|+.
T Consensus 155 ~~~~~kp~~~~~~~~~~~l---gi~~~~~~i~iGD~~nDi~~a~~aG~~-----------~i~v~~~~~~~~~~~~~~~~ 220 (267)
T 1swv_A 155 DVPAGRPYPWMCYKNAMEL---GVYPMNHMIKVGDTVSDMKEGRNAGMW-----------TVGVILGSSELGLTEEEVEN 220 (267)
T ss_dssp GSSCCTTSSHHHHHHHHHH---TCCSGGGEEEEESSHHHHHHHHHTTSE-----------EEEECTTCTTTCCCHHHHHH
T ss_pred ccCCCCCCHHHHHHHHHHh---CCCCCcCEEEEeCCHHHHHHHHHCCCE-----------EEEEcCCCCccCccHHHHhh
Confidence 3467889999999999999 9998 9999999999999999999852 356666654
Q ss_pred ------------------CcccceEeCChhHHHHHHHHHHh
Q 044635 801 ------------------PSKAKYYLDDTVEIVRLMQGLAC 823 (831)
Q Consensus 801 ------------------~s~A~y~l~d~~eV~~~L~~L~~ 823 (831)
...|+|++++..++..+|+.+..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~ad~v~~~~~el~~~l~~~~~ 261 (267)
T 1swv_A 221 MDSVELREKIEVVRNRFVENGAHFTIETMQELESVMEHIEK 261 (267)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHHHHHTC
T ss_pred chhhhhhhhhhhHHHHHHhcCCceeccCHHHHHHHHHHHhh
Confidence 13489999999999999877643
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=97.71 E-value=8.7e-05 Score=72.98 Aligned_cols=66 Identities=30% Similarity=0.478 Sum_probs=56.8
Q ss_pred EEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCCcccceEeCChh
Q 044635 733 VKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDTV 812 (831)
Q Consensus 733 V~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~s~A~y~l~d~~ 812 (831)
..|...+|+.+++.+ +++++++|||+.||++|++.+| ++|.+++....|+|++++.+
T Consensus 134 ~~~~~~~k~~~l~~l---------~~~~~i~iGD~~~Di~~~~~ag--------------~~v~~~~~~~~ad~v~~~~~ 190 (201)
T 4ap9_A 134 IRLRFRDKGEFLKRF---------RDGFILAMGDGYADAKMFERAD--------------MGIAVGREIPGADLLVKDLK 190 (201)
T ss_dssp EECCSSCHHHHHGGG---------TTSCEEEEECTTCCHHHHHHCS--------------EEEEESSCCTTCSEEESSHH
T ss_pred CcCCccCHHHHHHhc---------CcCcEEEEeCCHHHHHHHHhCC--------------ceEEECCCCccccEEEccHH
Confidence 556677899998877 4789999999999999999998 46788887669999999999
Q ss_pred HHHHHHHHH
Q 044635 813 EIVRLMQGL 821 (831)
Q Consensus 813 eV~~~L~~L 821 (831)
++.++|+.+
T Consensus 191 el~~~l~~l 199 (201)
T 4ap9_A 191 ELVDFIKNL 199 (201)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHHh
Confidence 999998865
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.67 E-value=6.8e-05 Score=76.95 Aligned_cols=74 Identities=9% Similarity=0.023 Sum_probs=60.0
Q ss_pred EEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEE----eCC-------C
Q 044635 732 EVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACT----VGR-------K 800 (831)
Q Consensus 732 EV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~----vG~-------~ 800 (831)
|..+.+..|+.+++.+++++ |++++++++|||+.||++|++.+|... +.+. .|. .
T Consensus 167 ~~~~~~kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~Di~~a~~aG~~~-----------~~~~~~~~~g~~~~~~l~~ 232 (254)
T 3umc_A 167 DLFGHYKPDPQVYLGACRLL---DLPPQEVMLCAAHNYDLKAARALGLKT-----------AFIARPLEYGPGQSQDLAA 232 (254)
T ss_dssp HHHTCCTTSHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHTTCEE-----------EEECCTTTTCTTCCSSSSC
T ss_pred cccccCCCCHHHHHHHHHHc---CCChHHEEEEcCchHhHHHHHHCCCeE-----------EEEecCCccCCCCCccccc
Confidence 45678889999999999999 999999999999999999999998531 1121 121 1
Q ss_pred CcccceEeCChhHHHHHHH
Q 044635 801 PSKAKYYLDDTVEIVRLMQ 819 (831)
Q Consensus 801 ~s~A~y~l~d~~eV~~~L~ 819 (831)
+..|+|++++..++..+|.
T Consensus 233 ~~~ad~v~~~l~el~~~l~ 251 (254)
T 3umc_A 233 EQDWDLIASDLLDLHRQLA 251 (254)
T ss_dssp SSCCSEEESSHHHHHHHHH
T ss_pred CCCCcEEECCHHHHHHHhc
Confidence 4578999999999998875
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.65 E-value=9.5e-05 Score=75.39 Aligned_cols=78 Identities=10% Similarity=-0.020 Sum_probs=64.6
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC------CcccceEe
Q 044635 735 PQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK------PSKAKYYL 808 (831)
Q Consensus 735 p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~------~s~A~y~l 808 (831)
+.+..|+.+++.+++++ |++++++++|||+.||+.|.+.+|.. ++.|..|.. ...|+|++
T Consensus 162 ~~~kp~~~~~~~~~~~l---g~~~~~~i~vGD~~~Di~~a~~aG~~-----------~i~v~~~~~~~~~l~~~~ad~v~ 227 (247)
T 3dv9_A 162 KYGKPNPEPYLMALKKG---GFKPNEALVIENAPLGVQAGVAAGIF-----------TIAVNTGPLHDNVLLNEGANLLF 227 (247)
T ss_dssp SSCTTSSHHHHHHHHHH---TCCGGGEEEEECSHHHHHHHHHTTSE-----------EEEECCSSSCHHHHHTTTCSEEE
T ss_pred CCCCCCCHHHHHHHHHc---CCChhheEEEeCCHHHHHHHHHCCCe-----------EEEEcCCCCCHHHHHhcCCCEEE
Confidence 56778899999999999 99999999999999999999999852 234444432 23799999
Q ss_pred CChhHHHHHHHHHHhhhc
Q 044635 809 DDTVEIVRLMQGLACVAD 826 (831)
Q Consensus 809 ~d~~eV~~~L~~L~~~~~ 826 (831)
++..++.++|+.+.+...
T Consensus 228 ~~~~el~~~l~~~~~~~~ 245 (247)
T 3dv9_A 228 HSMPDFNKNWETLQSALK 245 (247)
T ss_dssp SSHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHhc
Confidence 999999999999887544
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.61 E-value=5.1e-05 Score=74.58 Aligned_cols=67 Identities=16% Similarity=0.150 Sum_probs=54.7
Q ss_pred CCCH--HHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCCcccceEeCChhHH
Q 044635 737 GVNK--GLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDTVEI 814 (831)
Q Consensus 737 gvnK--G~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~s~A~y~l~d~~eV 814 (831)
+..| ..+++.+++.+ |++++++++|||+.||++|++.+|.. ++.|++..+.|+|++++..++
T Consensus 137 ~~~Kp~~~~~~~~~~~~---~i~~~~~~~iGD~~nDi~~~~~aG~~-------------~i~~~~~~~~a~~v~~~~~el 200 (207)
T 2go7_A 137 FVRKPSPEAATYLLDKY---QLNSDNTYYIGDRTLDVEFAQNSGIQ-------------SINFLESTYEGNHRIQALADI 200 (207)
T ss_dssp CCCTTSSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHHTCE-------------EEESSCCSCTTEEECSSTTHH
T ss_pred CCCCCCcHHHHHHHHHh---CCCcccEEEECCCHHHHHHHHHCCCe-------------EEEEecCCCCCCEEeCCHHHH
Confidence 3445 88999999998 99999999999999999999999852 455654323789999999998
Q ss_pred HHHHH
Q 044635 815 VRLMQ 819 (831)
Q Consensus 815 ~~~L~ 819 (831)
.++|+
T Consensus 201 ~~~l~ 205 (207)
T 2go7_A 201 SRIFE 205 (207)
T ss_dssp HHHTS
T ss_pred HHHHh
Confidence 87763
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00026 Score=83.86 Aligned_cols=153 Identities=12% Similarity=0.077 Sum_probs=102.2
Q ss_pred HHHHhc---cCCcEEEEeccCcccccCHHH-HHHHHHHHHH--hCCCCC-CcEEEEEEecCCCCCchhHHHHHHHHHHHH
Q 044635 330 LIKQFH---DQGKVMLLGVDDMDIFKGISL-KLLAMEQLLI--QHPEWQ-GKVVLVQIANPARGRGKDVKEVQAETYSTV 402 (831)
Q Consensus 330 lr~~~~---~~~~~iil~VdRld~~KGi~~-~l~A~~~lL~--~~P~~~-~~vvLvqig~p~r~~~~~~~~l~~~i~~lv 402 (831)
+++++| .++..+++.|.|+..-||..+ ++..++++++ .+|+.. ..+++|..|....+. ..-..+-+.+.+++
T Consensus 514 l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va 592 (796)
T 1l5w_A 514 VKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGY-YLAKNIIFAINKVA 592 (796)
T ss_dssp HHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHH
T ss_pred HHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhH-HHHHHHHHHHHHHH
Confidence 456666 346799999999999999999 8999988865 466522 257787777543222 22244556688888
Q ss_pred HHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCC--ccCCCCC---CCCCceEEEeccccccccc------C
Q 044635 403 ERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAV--RDGSEPS---SPKKSMLVVSEFIGCSPSL------S 471 (831)
Q Consensus 403 ~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~--~eGma~~---~~~~g~lVlSe~~G~~~~l------~ 471 (831)
.-||..=.-.+.-.|+|+. ..+-.--..+|.+||+++.||+ .|.-+.. ....|.|-+|..-|+-.++ .
T Consensus 593 ~~in~Dp~~~~~lKVvfl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~ 671 (796)
T 1l5w_A 593 DVINNDPLVGDKLKVVFLP-DYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEE 671 (796)
T ss_dssp HHHHTCTTTGGGEEEEECS-SCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGG
T ss_pred HHhccccccCCceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCeeeehhhccCCC
Confidence 8888531111222366665 4566666788999999999999 6632111 1224667778888876654 4
Q ss_pred CCceeCCCCHHHHH
Q 044635 472 GAIRVNPWNIDAVS 485 (831)
Q Consensus 472 ~allVnP~d~~~~A 485 (831)
+++++.. +.+++.
T Consensus 672 NgF~FG~-~~~ev~ 684 (796)
T 1l5w_A 672 NIFIFGH-TVEQVK 684 (796)
T ss_dssp GSEECSC-CHHHHH
T ss_pred cEEEecC-CHHHHH
Confidence 6888876 777765
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.0002 Score=73.17 Aligned_cols=75 Identities=8% Similarity=-0.001 Sum_probs=59.4
Q ss_pred EEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEE----eCC-------CC
Q 044635 733 VKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACT----VGR-------KP 801 (831)
Q Consensus 733 V~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~----vG~-------~~ 801 (831)
..+.+-.|+.+++.+++++ |++++++++|||+.||+.|.+.+|... +.+. .|. ..
T Consensus 164 ~~~~~kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~Di~~a~~aG~~~-----------~~~~~~~~~g~~~~~~~~~~ 229 (254)
T 3umg_A 164 INRKYKPDPQAYLRTAQVL---GLHPGEVMLAAAHNGDLEAAHATGLAT-----------AFILRPVEHGPHQTDDLAPT 229 (254)
T ss_dssp HHTCCTTSHHHHHHHHHHT---TCCGGGEEEEESCHHHHHHHHHTTCEE-----------EEECCTTTTCTTCCSCSSCS
T ss_pred cCCCCCCCHHHHHHHHHHc---CCChHHEEEEeCChHhHHHHHHCCCEE-----------EEEecCCcCCCCcccccccc
Confidence 3455677899999999998 999999999999999999999998531 1222 121 24
Q ss_pred cccceEeCChhHHHHHHHHH
Q 044635 802 SKAKYYLDDTVEIVRLMQGL 821 (831)
Q Consensus 802 s~A~y~l~d~~eV~~~L~~L 821 (831)
..|+|++++..++.++|...
T Consensus 230 ~~~d~~~~~~~el~~~l~~~ 249 (254)
T 3umg_A 230 GSWDISATDITDLAAQLRAG 249 (254)
T ss_dssp SCCSEEESSHHHHHHHHHHC
T ss_pred CCCceEECCHHHHHHHhcCC
Confidence 67899999999999988753
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00016 Score=85.61 Aligned_cols=155 Identities=10% Similarity=0.103 Sum_probs=103.0
Q ss_pred HHHHhc---cCCcEEEEeccCcccccCHHH-HHHHHHHHHH--hCCCCC-CcEEEEEEecCCCCCchhHHHHHHHHHHHH
Q 044635 330 LIKQFH---DQGKVMLLGVDDMDIFKGISL-KLLAMEQLLI--QHPEWQ-GKVVLVQIANPARGRGKDVKEVQAETYSTV 402 (831)
Q Consensus 330 lr~~~~---~~~~~iil~VdRld~~KGi~~-~l~A~~~lL~--~~P~~~-~~vvLvqig~p~r~~~~~~~~l~~~i~~lv 402 (831)
+++++| .++..+++.|.|+..-||..+ ++..++++++ ++|+.. ..+++|..|....+. ..-..+-+.+.+++
T Consensus 504 l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va 582 (796)
T 2c4m_A 504 ILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGY-VRAKAIIKLINSIA 582 (796)
T ss_dssp HHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTC-HHHHHHHHHHHHHH
T ss_pred HHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhH-HHHHHHHHHHHHHH
Confidence 456665 346799999999999999999 8999998875 666532 257787777543222 22344566688888
Q ss_pred HHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCC--ccCCCC---CCCCCceEEEeccccccccc------C
Q 044635 403 ERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAV--RDGSEP---SSPKKSMLVVSEFIGCSPSL------S 471 (831)
Q Consensus 403 ~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~--~eGma~---~~~~~g~lVlSe~~G~~~~l------~ 471 (831)
.-||..=.-.+.-.|+|+. ..+-.--..+|.+||+++.||+ .|.-+. -....|.|-+|..-|+-.++ .
T Consensus 583 ~~in~dp~~~~~lKVvFl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~ 661 (796)
T 2c4m_A 583 DLVNNDPEVSPLLKVVFVE-NYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVEIVDSVGEE 661 (796)
T ss_dssp HHHHTCTTTTTTEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHHHHCGG
T ss_pred HHhccccccCCceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCeEeehhhhcCCC
Confidence 8888632212333477765 4566666788999999999999 663211 01224666778877776554 3
Q ss_pred CCceeCC--CCHHHHHH
Q 044635 472 GAIRVNP--WNIDAVSD 486 (831)
Q Consensus 472 ~allVnP--~d~~~~A~ 486 (831)
+++++.. .+++++-.
T Consensus 662 NgF~FG~~~~ev~~l~~ 678 (796)
T 2c4m_A 662 NAYIFGARVEELPALRE 678 (796)
T ss_dssp GSEEESCCTTTHHHHHH
T ss_pred cEEEecCchhhHHHHHH
Confidence 6788866 66655543
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0032 Score=68.75 Aligned_cols=45 Identities=24% Similarity=0.293 Sum_probs=36.5
Q ss_pred cCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCC
Q 044635 571 TTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKS 620 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~ 620 (831)
++.+.++||+||||+. .. .+-+.+.++|+.|.+ .|..++++|+.+
T Consensus 11 ~~~~~~l~D~DGvl~~---g~-~~~p~a~~~l~~l~~-~g~~~~~vTNn~ 55 (352)
T 3kc2_A 11 SKKIAFAFDIDGVLFR---GK-KPIAGASDALKLLNR-NKIPYILLTNGG 55 (352)
T ss_dssp -CCEEEEECCBTTTEE---TT-EECTTHHHHHHHHHH-TTCCEEEECSCC
T ss_pred ccCCEEEEECCCeeEc---CC-eeCcCHHHHHHHHHH-CCCEEEEEeCCC
Confidence 3789999999999998 33 455788999999977 599999998654
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0024 Score=75.97 Aligned_cols=155 Identities=11% Similarity=0.080 Sum_probs=100.9
Q ss_pred HHHHhc---cCCcEEEEeccCcccccCHHHH-HHHHHHHH--HhCCCCCC-cEEEEEEecCCCCCchhHHHHHHHHHHHH
Q 044635 330 LIKQFH---DQGKVMLLGVDDMDIFKGISLK-LLAMEQLL--IQHPEWQG-KVVLVQIANPARGRGKDVKEVQAETYSTV 402 (831)
Q Consensus 330 lr~~~~---~~~~~iil~VdRld~~KGi~~~-l~A~~~lL--~~~P~~~~-~vvLvqig~p~r~~~~~~~~l~~~i~~lv 402 (831)
++++.| .++..+++.|.|+..-||..+. +..+++++ .++|+..- .+++|..|....+. ..-..+-+.+.+++
T Consensus 538 l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIkli~~va 616 (824)
T 2gj4_A 538 LEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGY-HMAKMIIKLITAIG 616 (824)
T ss_dssp HHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHH
T ss_pred HHHHhCCCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhH-HHHHHHHHHHHHHH
Confidence 555565 3467999999999999999998 88888885 36665321 35677777543222 22344556688888
Q ss_pred HHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCC--ccCCCCC---CCCCceEEEeccccccccc------C
Q 044635 403 ERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAV--RDGSEPS---SPKKSMLVVSEFIGCSPSL------S 471 (831)
Q Consensus 403 ~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~--~eGma~~---~~~~g~lVlSe~~G~~~~l------~ 471 (831)
..+|..=...+.-.|+|+. ..+-.--..+|.+||+++.||+ .|.-+.. ....|.|-+|..-|+-.++ .
T Consensus 617 ~~in~Dp~v~~~lKVvFl~-nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGanvEi~e~vG~~ 695 (824)
T 2gj4_A 617 DVVNHDPVVGDRLRVIFLE-NYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEE 695 (824)
T ss_dssp HHHTTCTTTGGGEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGG
T ss_pred HHhccCcccCCceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecCccchhhhccCCC
Confidence 8887432222222477765 4566666778999999999999 6632110 1224667777776765443 3
Q ss_pred CCceeCCCCHHHHHHHH
Q 044635 472 GAIRVNPWNIDAVSDAM 488 (831)
Q Consensus 472 ~allVnP~d~~~~A~ai 488 (831)
+++++... .+++ +++
T Consensus 696 Ngf~FG~~-~~ev-~~l 710 (824)
T 2gj4_A 696 NFFIFGMR-VEDV-DRL 710 (824)
T ss_dssp GSEECSCC-HHHH-HHH
T ss_pred CEEEeCCc-HHHH-HHH
Confidence 57888775 6666 444
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00052 Score=85.61 Aligned_cols=163 Identities=17% Similarity=0.177 Sum_probs=93.2
Q ss_pred CCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCceEEEcCCcCCccHHHHHHHHH
Q 044635 592 KSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVM 671 (831)
Q Consensus 592 ~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~il 671 (831)
..+.+++.+++++|.+ .|+.|+++||+.......+...+ ++..+||..+. .+.
T Consensus 598 Dplr~~~~~aI~~l~~-aGI~v~miTGD~~~tA~~ia~~l---gi~~~~~~~i~-----------------------~~~ 650 (1028)
T 2zxe_A 598 DPPRAAVPDAVGKCRS-AGIKVIMVTGDHPITAKAIAKGV---GIISEGNETIE-----------------------DIA 650 (1028)
T ss_dssp CCBCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHH---TSSCTTCCCHH-----------------------HHH
T ss_pred CCCChhHHHHHHHHHH-cCCEEEEECCCCHHHHHHHHHHc---CCCCCCchhHH-----------------------HHH
Confidence 3567899999999977 59999999999999988887653 34444442210 000
Q ss_pred HHHhccCCCeeEe-eccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHH
Q 044635 672 KLYTETTDGSTIE-DKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLST 750 (831)
Q Consensus 672 ~~~~e~~~gs~ie-~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~ 750 (831)
+.. ..+-.... .........-...+ ... .++ +.+.+......+ +..+.|. .|...++.+.+.
T Consensus 651 ~~~--~~~~~~~~~~~~~~~vi~G~~l~-~~~---~~~----l~~~~~~~~~~v-----~ar~~P~--~K~~iV~~lq~~ 713 (1028)
T 2zxe_A 651 ARL--NIPIGQVNPRDAKACVVHGSDLK-DLS---TEV----LDDILHYHTEIV-----FARTSPQ--QKLIIVEGCQRQ 713 (1028)
T ss_dssp HHT--TCCGGGSCGGGCCEEEEEHHHHT-TCC---HHH----HHHHHHHCSEEE-----EESCCHH--HHHHHHHHHHHT
T ss_pred hhc--CcchhhccccccceEEEEcHHhh-hCC---HHH----HHHHHhhCCcEE-----EEEcCHH--HHHHHHHHHHhC
Confidence 000 00000000 00011111111000 000 112 222222221111 1223343 699999988764
Q ss_pred hhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeC-CC----CcccceEeC--ChhHHHHHHH
Q 044635 751 MQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVG-RK----PSKAKYYLD--DTVEIVRLMQ 819 (831)
Q Consensus 751 l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG-~~----~s~A~y~l~--d~~eV~~~L~ 819 (831)
| ..|+++||+.||.+||+.++ ++|+|| +. +..|++++. +.+.+.++++
T Consensus 714 ----g---~~V~~iGDG~ND~paLk~Ad--------------vGIAmg~~gtd~ak~aAD~Vl~~~~~~~I~~~i~ 768 (1028)
T 2zxe_A 714 ----G---AIVAVTGDGVNDSPALKKAD--------------IGVAMGISGSDVSKQAADMILLDDNFASIVTGVE 768 (1028)
T ss_dssp ----T---CCEEEEECSGGGHHHHHHSS--------------EEEEESSSCCHHHHHHCSEEETTCCTHHHHHHHH
T ss_pred ----C---CEEEEEcCCcchHHHHHhCC--------------ceEEeCCccCHHHHHhcCEEecCCCHHHHHHHHH
Confidence 3 56999999999999999997 689999 44 457899884 4677777665
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00035 Score=70.61 Aligned_cols=73 Identities=10% Similarity=-0.004 Sum_probs=58.9
Q ss_pred eCCCCHHHHHHHHHHHhhhcC-CCcccEEEEcCCc-hhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEe
Q 044635 735 PQGVNKGLVAKRLLSTMQERE-MLPDFVLCVGDDR-SDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYL 808 (831)
Q Consensus 735 p~gvnKG~al~~Ll~~l~~~g-~~~d~vla~GD~~-NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l 808 (831)
..+..|+.+++.+++++ | ++++++++|||+. ||+.|.+.+|.. .+.+..|+. +..|+|++
T Consensus 155 ~~~kp~~~~~~~~~~~~---g~~~~~~~i~vGD~~~~Di~~a~~aG~~-----------~i~~~~~~~~~~~~~~ad~v~ 220 (238)
T 3ed5_A 155 GFQKPMKEYFNYVFERI---PQFSAEHTLIIGDSLTADIKGGQLAGLD-----------TCWMNPDMKPNVPEIIPTYEI 220 (238)
T ss_dssp TSCTTCHHHHHHHHHTS---TTCCGGGEEEEESCTTTTHHHHHHTTCE-----------EEEECTTCCCCTTCCCCSEEE
T ss_pred CCCCCChHHHHHHHHHc---CCCChhHeEEECCCcHHHHHHHHHCCCE-----------EEEECCCCCCCcccCCCCeEE
Confidence 45667799999999998 9 9999999999998 999999999852 123333422 45799999
Q ss_pred CChhHHHHHHHHH
Q 044635 809 DDTVEIVRLMQGL 821 (831)
Q Consensus 809 ~d~~eV~~~L~~L 821 (831)
++..++.++|+..
T Consensus 221 ~~~~el~~~l~~~ 233 (238)
T 3ed5_A 221 RKLEELYHILNIE 233 (238)
T ss_dssp SSGGGHHHHHTCC
T ss_pred CCHHHHHHHHHhh
Confidence 9999999988754
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0003 Score=71.07 Aligned_cols=73 Identities=8% Similarity=-0.012 Sum_probs=49.2
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC---CcccceEeCCh
Q 044635 735 PQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK---PSKAKYYLDDT 811 (831)
Q Consensus 735 p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~---~s~A~y~l~d~ 811 (831)
..+..|..+++.+++++ |++++++++|||+.||+.|++.+|.. +.+++. ...|+|++++.
T Consensus 143 ~~~Kp~~~~~~~~~~~l---gi~~~~~i~vGDs~~Di~~a~~aG~~--------------~~~~~~~~~~~~ad~v~~s~ 205 (233)
T 3nas_A 143 AKGKPDPDIFLTAAAML---DVSPADCAAIEDAEAGISAIKSAGMF--------------AVGVGQGQPMLGADLVVRQT 205 (233)
T ss_dssp ------CCHHHHHHHHH---TSCGGGEEEEECSHHHHHHHHHTTCE--------------EEECC-------CSEECSSG
T ss_pred CCCCCChHHHHHHHHHc---CCCHHHEEEEeCCHHHHHHHHHcCCE--------------EEEECCccccccCCEEeCCh
Confidence 44555677999999999 99999999999999999999999853 333332 23899999876
Q ss_pred hHH--HHHHHHHHhh
Q 044635 812 VEI--VRLMQGLACV 824 (831)
Q Consensus 812 ~eV--~~~L~~L~~~ 824 (831)
+++ ..+++.+...
T Consensus 206 ~el~~~~~~~~~~~~ 220 (233)
T 3nas_A 206 SDLTLELLHEEWEQY 220 (233)
T ss_dssp GGCCHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHH
Confidence 553 3555554444
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=97.09 E-value=0.00015 Score=75.87 Aligned_cols=59 Identities=19% Similarity=0.280 Sum_probs=44.7
Q ss_pred hcCceeEEecCCCccCCCCC----------------------CCCCCCHHHHHHHHHHhhcCCCeEEEECCCCH---hhH
Q 044635 570 RTTTRAILLDYDGTLMPQAS----------------------IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSR---KTL 624 (831)
Q Consensus 570 ~s~~rli~~D~DGTLl~~~~----------------------~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~---~~l 624 (831)
..++++|+||+||||++... ....+.+.+.++|+.|.+ .|..++|+|||+. ..+
T Consensus 56 ~~~~kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~-~Gi~i~iaTnr~~~~~~~~ 134 (258)
T 2i33_A 56 TEKKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDFLKYTES-KGVDIYYISNRKTNQLDAT 134 (258)
T ss_dssp CSSEEEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHHHHHHHH-TTCEEEEEEEEEGGGHHHH
T ss_pred CCCCCEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHHHHHHHH-CCCEEEEEcCCchhHHHHH
Confidence 34678999999999998310 014677899999999987 5999999999994 444
Q ss_pred HHHhC
Q 044635 625 AEWFS 629 (831)
Q Consensus 625 ~~~~~ 629 (831)
...+.
T Consensus 135 ~~~L~ 139 (258)
T 2i33_A 135 IKNLE 139 (258)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.00071 Score=69.16 Aligned_cols=72 Identities=11% Similarity=0.064 Sum_probs=58.6
Q ss_pred EeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCC------cccceE
Q 044635 734 KPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKP------SKAKYY 807 (831)
Q Consensus 734 ~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~------s~A~y~ 807 (831)
.+.+..|..++..+++++ |++++++++|||+.||+.|.+.+|.. .++|+.|... ..|+|+
T Consensus 161 ~~~~Kp~p~~~~~~~~~l---~~~~~~~~~vGDs~~Di~~a~~aG~~-----------~v~v~~~~~~~~~~~~~~a~~~ 226 (240)
T 2hi0_A 161 GIRRKPAPDMTSECVKVL---GVPRDKCVYIGDSEIDIQTARNSEMD-----------EIAVNWGFRSVPFLQKHGATVI 226 (240)
T ss_dssp TSCCTTSSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHTTCE-----------EEEESSSSSCHHHHHHTTCCCE
T ss_pred CCCCCCCHHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHCCCe-----------EEEECCCCCchhHHHhcCCCEE
Confidence 356778999999999999 99999999999999999999999852 2455556422 368899
Q ss_pred eCChhHHHHHHH
Q 044635 808 LDDTVEIVRLMQ 819 (831)
Q Consensus 808 l~d~~eV~~~L~ 819 (831)
+++..++..+|.
T Consensus 227 ~~~~~el~~~l~ 238 (240)
T 2hi0_A 227 VDTAEKLEEAIL 238 (240)
T ss_dssp ECSHHHHHHHHH
T ss_pred ECCHHHHHHHhc
Confidence 999999887764
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.01 E-value=0.00076 Score=68.04 Aligned_cols=72 Identities=17% Similarity=0.092 Sum_probs=56.9
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCc-hhHHHHHHcchhcCCCCCCCCCceEEEEeCC---CCcccceEeCC
Q 044635 735 PQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDR-SDEDMFEVIISSMAGPSIAPRAEVFACTVGR---KPSKAKYYLDD 810 (831)
Q Consensus 735 p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~-NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~---~~s~A~y~l~d 810 (831)
+.+..|+.+++.+++++ |++++++++|||+. ||+.|.+.+|... +.+.-|. ....|+|++++
T Consensus 159 ~~~kp~~~~~~~~~~~l---gi~~~~~~~iGD~~~~Di~~a~~aG~~~-----------~~~~~~~~~~~~~~~d~vi~s 224 (240)
T 3qnm_A 159 GVLKPRPEIFHFALSAT---QSELRESLMIGDSWEADITGAHGVGMHQ-----------AFYNVTERTVFPFQPTYHIHS 224 (240)
T ss_dssp TCCTTSHHHHHHHHHHT---TCCGGGEEEEESCTTTTHHHHHHTTCEE-----------EEECCSCCCCCSSCCSEEESS
T ss_pred CCCCCCHHHHHHHHHHc---CCCcccEEEECCCchHhHHHHHHcCCeE-----------EEEcCCCCCCcCCCCceEECC
Confidence 45677899999999998 99999999999995 9999999998531 1122222 24689999999
Q ss_pred hhHHHHHHHH
Q 044635 811 TVEIVRLMQG 820 (831)
Q Consensus 811 ~~eV~~~L~~ 820 (831)
..|+..+++.
T Consensus 225 l~e~~~~~~~ 234 (240)
T 3qnm_A 225 LKELMNLLEG 234 (240)
T ss_dssp THHHHHHTC-
T ss_pred HHHHHHHHhc
Confidence 9999888764
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0013 Score=81.78 Aligned_cols=142 Identities=16% Similarity=0.249 Sum_probs=90.0
Q ss_pred CCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCceEEEcCCcCCccHHHHHHHHH
Q 044635 592 KSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVM 671 (831)
Q Consensus 592 ~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~il 671 (831)
..+.+++.++++.|.+ .|+.++++||+.........+.+ ++...+.. + .+.
T Consensus 602 D~lr~~~~~~I~~l~~-~Gi~v~miTGD~~~ta~~ia~~l---gi~~~~~~-i---~~~--------------------- 652 (995)
T 3ar4_A 602 DPPRKEVMGSIQLCRD-AGIRVIMITGDNKGTAIAICRRI---GIFGENEE-V---ADR--------------------- 652 (995)
T ss_dssp CCBCTTHHHHHHHHHH-TTCEEEEEESSCHHHHHHHHHHH---TSSCTTCC-C---TTT---------------------
T ss_pred CCCchhHHHHHHHHHH-cCCEEEEECCCCHHHHHHHHHHc---CcCCCCCc-c---cce---------------------
Confidence 4566889999999977 59999999999999888777643 22221110 0 000
Q ss_pred HHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHh
Q 044635 672 KLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTM 751 (831)
Q Consensus 672 ~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l 751 (831)
.+..++ +...++ +++.+.+. + ..-+-++.|. +|+.+++.+.+.
T Consensus 653 ----------~~~g~~------~~~l~~-------~~~~~~~~----~-------~~v~~r~~P~--~K~~~v~~l~~~- 695 (995)
T 3ar4_A 653 ----------AYTGRE------FDDLPL-------AEQREACR----R-------ACCFARVEPS--HKSKIVEYLQSY- 695 (995)
T ss_dssp ----------EEEHHH------HHTSCH-------HHHHHHHH----H-------CCEEESCCSS--HHHHHHHHHHTT-
T ss_pred ----------EEEchh------hhhCCH-------HHHHHHHh----h-------CcEEEEeCHH--HHHHHHHHHHHC-
Confidence 000000 000111 11112221 1 1123445565 799999998654
Q ss_pred hhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEe--CChhHHHHHHH
Q 044635 752 QEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYL--DDTVEIVRLMQ 819 (831)
Q Consensus 752 ~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l--~d~~eV~~~L~ 819 (831)
| +.|+++||+.||.+||+.++ ++++||+. +..|++++ ++...+.++++
T Consensus 696 ---g---~~v~~~GDG~ND~~alk~Ad--------------vgiamg~g~~~ak~aAd~vl~~~~~~~i~~~i~ 749 (995)
T 3ar4_A 696 ---D---EITAMTGDGVNDAPALKKAE--------------IGIAMGSGTAVAKTASEMVLADDNFSTIVAAVE 749 (995)
T ss_dssp ---T---CCEEEEECSGGGHHHHHHST--------------EEEEETTSCHHHHHTCSEEETTCCHHHHHHHHH
T ss_pred ---C---CEEEEEcCCchhHHHHHHCC--------------eEEEeCCCCHHHHHhCCEEECCCCHHHHHHHHH
Confidence 3 67999999999999999997 68889864 35789988 45777877664
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.001 Score=66.97 Aligned_cols=73 Identities=10% Similarity=-0.002 Sum_probs=53.9
Q ss_pred eCCCCHH---HHHHHHHHHhhhcCCCcccEEEEcCCc-hhHHHHHHcchhcCCCCCCCCCceEEEEe-------CC----
Q 044635 735 PQGVNKG---LVAKRLLSTMQEREMLPDFVLCVGDDR-SDEDMFEVIISSMAGPSIAPRAEVFACTV-------GR---- 799 (831)
Q Consensus 735 p~gvnKG---~al~~Ll~~l~~~g~~~d~vla~GD~~-NDe~Mf~~a~~~~~~~~~~~~~~~~~v~v-------G~---- 799 (831)
...-++. .+++. ++++ |++++++++|||+. ||+.|.+.+|.... .+.- |+
T Consensus 150 ~~KP~~~~~~~~l~~-~~~l---gi~~~~~~~vGD~~~~Di~~a~~aG~~~~-----------~~~~~~~~~g~g~~~~~ 214 (240)
T 3smv_A 150 SYKPNPNNFTYMIDA-LAKA---GIEKKDILHTAESLYHDHIPANDAGLVSA-----------WIYRRHGKEGYGATHVP 214 (240)
T ss_dssp SCTTSHHHHHHHHHH-HHHT---TCCGGGEEEEESCTTTTHHHHHHHTCEEE-----------EECTTCC-------CCC
T ss_pred CCCCCHHHHHHHHHH-HHhc---CCCchhEEEECCCchhhhHHHHHcCCeEE-----------EEcCCCcccCCCCCCCC
Confidence 3344555 56555 7777 99999999999996 99999999986321 1110 21
Q ss_pred -CCcccceEeCChhHHHHHHHHHH
Q 044635 800 -KPSKAKYYLDDTVEIVRLMQGLA 822 (831)
Q Consensus 800 -~~s~A~y~l~d~~eV~~~L~~L~ 822 (831)
....|+|++++..++.++|+.+.
T Consensus 215 ~~~~~ad~v~~~~~el~~~l~~~l 238 (240)
T 3smv_A 215 SRMPNVDFRFNSMGEMAEAHKQAL 238 (240)
T ss_dssp SSCCCCSEEESSHHHHHHHHHHHH
T ss_pred cCCCCCCEEeCCHHHHHHHHHHHh
Confidence 24789999999999999998764
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0014 Score=80.27 Aligned_cols=168 Identities=13% Similarity=0.110 Sum_probs=105.6
Q ss_pred HHHHHHhcCceeEEecCCC-----ccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEe
Q 044635 564 IVSAYKRTTTRAILLDYDG-----TLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAA 638 (831)
Q Consensus 564 ~~~~y~~s~~rli~~D~DG-----TLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~lia 638 (831)
..+.|.+...|.+++=++. +++..-.....|-+++.+++++|.+ .|+.++++||........+.+++ |+..
T Consensus 501 ~~~~~a~~G~RvL~vA~~~~e~~l~~lGli~i~Dp~R~ea~~aI~~l~~-aGI~v~MiTGD~~~TA~aIA~~l---GI~~ 576 (920)
T 1mhs_A 501 KVAEFATRGFRSLGVARKRGEGSWEILGIMPCMDPPRHDTYKTVCEAKT-LGLSIKMLTGDAVGIARETSRQL---GLGT 576 (920)
T ss_dssp HHHHHHTSSCCCCEECCCSSSCSCCCCBBCCCCCCCCHHHHHHHHHHHH-HTCEEEEEESSCHHHHHHHHHHH---TSSC
T ss_pred HHHHHHhCCCEEEEEEEeccccccEEEEEEEEeccccccHHHHHHHHhh-cCceEEEEcCCCHHHHHHHHHHc---CCCc
Confidence 3445556667877776653 5554333456788999999999987 49999999999999888877654 2210
Q ss_pred cCCEEEEeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhc
Q 044635 639 EHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLA 718 (831)
Q Consensus 639 enGa~i~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~ 718 (831)
+ +...+. . ...|. + ...+.+ +.+.+.
T Consensus 577 -~---~~~~~~-----~---------------------~~~g~--~----------~~~~~e------------l~~~~~ 602 (920)
T 1mhs_A 577 -N---IYNAER-----L---------------------GLGGG--G----------DMPGSE------------VYDFVE 602 (920)
T ss_dssp -S---CCCSSS-----S---------------------SSCBC--C----------CGGGGG------------GGTTTT
T ss_pred -c---ccCccc-----e---------------------eecCc--c----------cCCHHH------------HHHHHh
Confidence 0 000000 0 00010 0 000011 111222
Q ss_pred CCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeC
Q 044635 719 NEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVG 798 (831)
Q Consensus 719 ~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG 798 (831)
+. ..+-++.|. +|...++.+.+. | +.|+++||+.||.+||+.++ ++++||
T Consensus 603 ~~-------~V~arv~P~--~K~~iV~~Lq~~----g---~~Vam~GDGvNDapaLk~Ad--------------vGIAmg 652 (920)
T 1mhs_A 603 AA-------DGFAEVFPQ--HKYNVVEILQQR----G---YLVAMTGDGVNDAPSLKKAD--------------TGIAVE 652 (920)
T ss_dssp TT-------SCEESCCST--HHHHHHHHHHTT----T---CCCEECCCCGGGHHHHHHSS--------------EEEEET
T ss_pred hC-------eEEEEeCHH--HHHHHHHHHHhC----C---CeEEEEcCCcccHHHHHhCC--------------cCcccc
Confidence 21 123456665 799999998654 4 57999999999999999997 689998
Q ss_pred CC----CcccceEe--CChhHHHHHHH
Q 044635 799 RK----PSKAKYYL--DDTVEIVRLMQ 819 (831)
Q Consensus 799 ~~----~s~A~y~l--~d~~eV~~~L~ 819 (831)
+. +..|++++ ++...+.++++
T Consensus 653 ~gtd~ak~aADiVl~~~~~~~I~~ai~ 679 (920)
T 1mhs_A 653 GSSDAARSAADIVFLAPGLGAIIDALK 679 (920)
T ss_dssp TSCHHHHHSSSEEESSCCSHHHHHHHH
T ss_pred cccHHHHHhcCeEEcCCCHHHHHHHHH
Confidence 74 45788987 35566666554
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0039 Score=68.78 Aligned_cols=144 Identities=10% Similarity=0.011 Sum_probs=70.4
Q ss_pred CCcEEEEeccCccccc----------CHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHh
Q 044635 337 QGKVMLLGVDDMDIFK----------GISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERIN 406 (831)
Q Consensus 337 ~~~~iil~VdRld~~K----------Gi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN 406 (831)
....+++++|++...| .+...++|+.++ +++ ++.++.+ .+. +++..+
T Consensus 226 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~-----~~~----~v~~~~~-----~~~----~~l~~~----- 282 (398)
T 4fzr_A 226 KQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL-----GFE----VVVAVSD-----KLA----QTLQPL----- 282 (398)
T ss_dssp SSCEEECC----------------CCSHHHHHHHGGGG-----TCE----EEECCCC-----------------C-----
T ss_pred CCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC-----CCE----EEEEeCC-----cch----hhhccC-----
Confidence 4567889999997555 456666665443 232 5544422 111 111111
Q ss_pred ccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECC----CccCCCCCCCCCceEEEe----ccccccccc---CCCce
Q 044635 407 QTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTA----VRDGSEPSSPKKSMLVVS----EFIGCSPSL---SGAIR 475 (831)
Q Consensus 407 ~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS----~~eGma~~~~~~g~lVlS----e~~G~~~~l---~~all 475 (831)
. ..|. +.+.++. ..++..||++|..+ +.|.|++ +.|+|+. +-.+.++.+ ..|++
T Consensus 283 -----~--~~v~-~~~~~~~---~~ll~~ad~~v~~gG~~t~~Ea~~~----G~P~v~~p~~~~q~~~a~~~~~~g~g~~ 347 (398)
T 4fzr_A 283 -----P--EGVL-AAGQFPL---SAIMPACDVVVHHGGHGTTLTCLSE----GVPQVSVPVIAEVWDSARLLHAAGAGVE 347 (398)
T ss_dssp -----C--TTEE-EESCCCH---HHHGGGCSEEEECCCHHHHHHHHHT----TCCEEECCCSGGGHHHHHHHHHTTSEEE
T ss_pred -----C--CcEE-EeCcCCH---HHHHhhCCEEEecCCHHHHHHHHHh----CCCEEecCCchhHHHHHHHHHHcCCEEe
Confidence 1 1344 4456764 55666799999644 2344444 4567773 333444444 45788
Q ss_pred eCCC--CHHHHHHHHHHHhcCCHHHHHHHHHH-HhhhhccCCHHHHHH
Q 044635 476 VNPW--NIDAVSDAMDSALEMADQEKQLRHEK-HYRYVSTHDVGYWAR 520 (831)
Q Consensus 476 VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~-~~~~v~~~~~~~W~~ 520 (831)
+++. |.++++++|.++|+.+. .+.++.+ ..+..........++
T Consensus 348 ~~~~~~~~~~l~~ai~~ll~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 393 (398)
T 4fzr_A 348 VPWEQAGVESVLAACARIRDDSS--YVGNARRLAAEMATLPTPADIVR 393 (398)
T ss_dssp CC-------CHHHHHHHHHHCTH--HHHHHHHHHHHHTTSCCHHHHHH
T ss_pred cCcccCCHHHHHHHHHHHHhCHH--HHHHHHHHHHHHHcCCCHHHHHH
Confidence 8877 78999999999998663 2333333 444445555544443
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0017 Score=64.88 Aligned_cols=70 Identities=20% Similarity=0.245 Sum_probs=57.5
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC------CcccceEe
Q 044635 735 PQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK------PSKAKYYL 808 (831)
Q Consensus 735 p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~------~s~A~y~l 808 (831)
+.+-.|..+.+.+++++ |++++++++|||+.||+.|.+.+|.. .++|+.|.. ...|+|++
T Consensus 134 ~~~Kp~p~~~~~~~~~l---g~~p~~~~~vgDs~~Di~~a~~aG~~-----------~i~v~~~~~~~~~l~~~~a~~v~ 199 (210)
T 2ah5_A 134 PEAPHKADVIHQALQTH---QLAPEQAIIIGDTKFDMLGARETGIQ-----------KLAITWGFGEQADLLNYQPDYIA 199 (210)
T ss_dssp SSCCSHHHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEESSSSSCHHHHHTTCCSEEE
T ss_pred CCCCCChHHHHHHHHHc---CCCcccEEEECCCHHHHHHHHHCCCc-----------EEEEcCCCCCHHHHHhCCCCEEE
Confidence 56678999999999998 99999999999999999999999852 245656643 13588999
Q ss_pred CChhHHHHHH
Q 044635 809 DDTVEIVRLM 818 (831)
Q Consensus 809 ~d~~eV~~~L 818 (831)
++..++..+|
T Consensus 200 ~~~~el~~~l 209 (210)
T 2ah5_A 200 HKPLEVLAYF 209 (210)
T ss_dssp SSTTHHHHHT
T ss_pred CCHHHHHHHh
Confidence 9999887654
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=96.81 E-value=0.00063 Score=67.59 Aligned_cols=68 Identities=21% Similarity=0.241 Sum_probs=52.9
Q ss_pred CCCH--HHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC--C--cccceEeCC
Q 044635 737 GVNK--GLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK--P--SKAKYYLDD 810 (831)
Q Consensus 737 gvnK--G~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~--~--s~A~y~l~d 810 (831)
+.+| +.+++.+++.+ |++++++++|||+.||+.|.+.+|... +.+..|.. . ..|+|++++
T Consensus 135 ~~~KP~~~~~~~~~~~~---~~~~~~~i~vGD~~~Di~~a~~aG~~~-----------~~~~~~~~~~~~~~~a~~~~~~ 200 (209)
T 2hdo_A 135 PKRKPDPLPLLTALEKV---NVAPQNALFIGDSVSDEQTAQAANVDF-----------GLAVWGMDPNADHQKVAHRFQK 200 (209)
T ss_dssp SCCTTSSHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCEE-----------EEEGGGCCTTGGGSCCSEEESS
T ss_pred CCCCCCcHHHHHHHHHc---CCCcccEEEECCChhhHHHHHHcCCeE-----------EEEcCCCCChhhhccCCEEeCC
Confidence 6789 99999999998 999999999999999999999998531 22222332 1 128899999
Q ss_pred hhHHHHHH
Q 044635 811 TVEIVRLM 818 (831)
Q Consensus 811 ~~eV~~~L 818 (831)
..++.++|
T Consensus 201 ~~el~~~l 208 (209)
T 2hdo_A 201 PLDILELF 208 (209)
T ss_dssp GGGGGGGC
T ss_pred HHHHHHhh
Confidence 88887654
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0018 Score=66.01 Aligned_cols=75 Identities=17% Similarity=0.181 Sum_probs=59.2
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCc-hhHHHHHHcchhcCCCCCCCCCceEEEEeCCCC-------cccce
Q 044635 735 PQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDR-SDEDMFEVIISSMAGPSIAPRAEVFACTVGRKP-------SKAKY 806 (831)
Q Consensus 735 p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~-NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~-------s~A~y 806 (831)
..+-.|..+++.+++.+ |++++++++|||+. ||+.|.+.+|.. ++.|..|... ..|++
T Consensus 147 ~~~Kp~~~~~~~~~~~~---g~~~~~~i~iGD~~~~Di~~a~~aG~~-----------~~~v~~g~~~~~~~~~~~~~~~ 212 (241)
T 2hoq_A 147 GVKKPHPKIFKKALKAF---NVKPEEALMVGDRLYSDIYGAKRVGMK-----------TVWFRYGKHSERELEYRKYADY 212 (241)
T ss_dssp TCCTTCHHHHHHHHHHH---TCCGGGEEEEESCTTTTHHHHHHTTCE-----------EEEECCSCCCHHHHTTGGGCSE
T ss_pred CCCCCCHHHHHHHHHHc---CCCcccEEEECCCchHhHHHHHHCCCE-----------EEEECCCCCCcccccccCCCCE
Confidence 44556779999999998 99999999999998 999999999853 2344445421 26889
Q ss_pred EeCChhHHHHHHHHHHh
Q 044635 807 YLDDTVEIVRLMQGLAC 823 (831)
Q Consensus 807 ~l~d~~eV~~~L~~L~~ 823 (831)
++++..++..+|+.+..
T Consensus 213 ~i~~~~el~~~l~~~~~ 229 (241)
T 2hoq_A 213 EIDNLESLLEVLARESS 229 (241)
T ss_dssp EESSTTHHHHHHHHCCS
T ss_pred EECCHHHHHHHHHHHhh
Confidence 99999999998876543
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0014 Score=66.15 Aligned_cols=71 Identities=17% Similarity=0.152 Sum_probs=56.8
Q ss_pred CCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCC---cccceEeCChhH
Q 044635 737 GVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKP---SKAKYYLDDTVE 813 (831)
Q Consensus 737 gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~---s~A~y~l~d~~e 813 (831)
+-.|+.+++.+++.+ |++++++++|||+.||+.|.+.+|.. .++|..|..+ ..|++++++..+
T Consensus 138 ~Kp~~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~~~e 203 (222)
T 2nyv_A 138 KKPSPTPVLKTLEIL---GEEPEKALIVGDTDADIEAGKRAGTK-----------TALALWGYVKLNSQIPDFTLSRPSD 203 (222)
T ss_dssp TCCTTHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEETTSSCSCCCCCCSEEESSTTH
T ss_pred CCCChHHHHHHHHHh---CCCchhEEEECCCHHHHHHHHHCCCe-----------EEEEcCCCCCccccCCCEEECCHHH
Confidence 347899999999998 99999999999999999999999852 1334344321 568899999999
Q ss_pred HHHHHHHH
Q 044635 814 IVRLMQGL 821 (831)
Q Consensus 814 V~~~L~~L 821 (831)
+.++|+.+
T Consensus 204 l~~~l~~~ 211 (222)
T 2nyv_A 204 LVKLMDNH 211 (222)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHh
Confidence 99888654
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=95.75 E-value=0.00024 Score=74.44 Aligned_cols=54 Identities=17% Similarity=0.252 Sum_probs=38.1
Q ss_pred EEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCC
Q 044635 576 ILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSP 630 (831)
Q Consensus 576 i~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 630 (831)
++..+++.+...-.....+-+.+.++|+.|.+ .|..++++||.+...+...+..
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~-~g~~~~i~T~~~~~~~~~~~~~ 172 (263)
T 2yj3_A 119 IAVYINGEPIASFNISDVPRPNLKDYLEKLKN-EGLKIIILSGDKEDKVKELSKE 172 (263)
Confidence 55556665554211234567889999999976 5899999999988887766653
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0037 Score=69.11 Aligned_cols=152 Identities=11% Similarity=0.046 Sum_probs=89.8
Q ss_pred CCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCcc
Q 044635 337 QGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDP 416 (831)
Q Consensus 337 ~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~p 416 (831)
..+.+++++|++. .|+...+..+++.+ ++. +++ ++.++.+. ...++++ ++ . ..
T Consensus 241 ~~~~vlv~~G~~~-~~~~~~~~~~~~~l-~~~-~~~----~~~~~g~~----~~~~~l~----~~----------~--~~ 293 (412)
T 3otg_A 241 ARPLVYLTLGTSS-GGTVEVLRAAIDGL-AGL-DAD----VLVASGPS----LDVSGLG----EV----------P--AN 293 (412)
T ss_dssp TSCEEEEECTTTT-CSCHHHHHHHHHHH-HTS-SSE----EEEECCSS----CCCTTCC----CC----------C--TT
T ss_pred CCCEEEEEcCCCC-cCcHHHHHHHHHHH-HcC-CCE----EEEEECCC----CChhhhc----cC----------C--Cc
Confidence 4567889999996 66666666666554 433 222 44444321 1001111 00 0 13
Q ss_pred EEEecCCCCHHHHHHHHHHcCEeEECCC----ccCCCCCCCCCceEEEeccc----cccccc---CCCceeCCC--CHHH
Q 044635 417 VVLIDEPLKFYERIAYYVVAECCLVTAV----RDGSEPSSPKKSMLVVSEFI----GCSPSL---SGAIRVNPW--NIDA 483 (831)
Q Consensus 417 v~~~~~~v~~~el~aly~~ADv~vvtS~----~eGma~~~~~~g~lVlSe~~----G~~~~l---~~allVnP~--d~~~ 483 (831)
|.+ .+.++ +..+|+.||++|.+|- .|.|++ +.|+|+.... +.++.+ ..|++++|. |+++
T Consensus 294 v~~-~~~~~---~~~~l~~ad~~v~~~g~~t~~Ea~a~----G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~ 365 (412)
T 3otg_A 294 VRL-ESWVP---QAALLPHVDLVVHHGGSGTTLGALGA----GVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDS 365 (412)
T ss_dssp EEE-ESCCC---HHHHGGGCSEEEESCCHHHHHHHHHH----TCCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCCHHH
T ss_pred EEE-eCCCC---HHHHHhcCcEEEECCchHHHHHHHHh----CCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHH
Confidence 444 45664 7788999999998773 244444 4567764433 344444 467888887 8999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHH
Q 044635 484 VSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQ 524 (831)
Q Consensus 484 ~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 524 (831)
++++|.++|+.+ +.++...+..++....+++..-++.+.+
T Consensus 366 l~~ai~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (412)
T 3otg_A 366 VSGAAKRLLAEE-SYRAGARAVAAEIAAMPGPDEVVRLLPG 405 (412)
T ss_dssp HHHHHHHHHHCH-HHHHHHHHHHHHHHHSCCHHHHHTTHHH
T ss_pred HHHHHHHHHhCH-HHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 999999999854 3344334445555666666665554443
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0012 Score=72.74 Aligned_cols=148 Identities=12% Similarity=0.067 Sum_probs=90.9
Q ss_pred CCcEEEEeccCcccccCH-HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCc
Q 044635 337 QGKVMLLGVDDMDIFKGI-SLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYD 415 (831)
Q Consensus 337 ~~~~iil~VdRld~~KGi-~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~ 415 (831)
..+.++++.|++...|+. ..+++++.+. ++.|+++ ++.++.+ .+.+.++ . . . .
T Consensus 217 ~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~----~v~~~~~-----~~~~~l~----~--------~--~--~ 270 (391)
T 3tsa_A 217 SARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVE----AVIAVPP-----EHRALLT----D--------L--P--D 270 (391)
T ss_dssp SSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEE----EEEECCG-----GGGGGCT----T--------C--C--T
T ss_pred CCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeE----EEEEECC-----cchhhcc----c--------C--C--C
Confidence 346788889999887666 8888888888 8887654 6666532 2211111 0 0 1 1
Q ss_pred cEEEecCCCCHHHHHHHHHHcCEeEECCC----ccCCCCCCCCCceEEEecc----ccccccc---CCCceeCC----CC
Q 044635 416 PVVLIDEPLKFYERIAYYVVAECCLVTAV----RDGSEPSSPKKSMLVVSEF----IGCSPSL---SGAIRVNP----WN 480 (831)
Q Consensus 416 pv~~~~~~v~~~el~aly~~ADv~vvtS~----~eGma~~~~~~g~lVlSe~----~G~~~~l---~~allVnP----~d 480 (831)
.|. +.+.++..++ +..||++|..+- .|.|++ +.|+|+.-. .+.+..+ ..|++++| .|
T Consensus 271 ~v~-~~~~~~~~~l---l~~ad~~v~~~G~~t~~Ea~~~----G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~ 342 (391)
T 3tsa_A 271 NAR-IAESVPLNLF---LRTCELVICAGGSGTAFTATRL----GIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQSD 342 (391)
T ss_dssp TEE-ECCSCCGGGT---GGGCSEEEECCCHHHHHHHHHT----TCCEEECCCSTTHHHHHHHHHHTTSEEECCSHHHHTC
T ss_pred CEE-EeccCCHHHH---HhhCCEEEeCCCHHHHHHHHHh----CCCEEecCCcccHHHHHHHHHHcCCEEecCcccccCC
Confidence 344 4566776654 489999997543 344444 456666332 3333334 45788998 78
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHH-HhhhhccCCHHHHHH
Q 044635 481 IDAVSDAMDSALEMADQEKQLRHEK-HYRYVSTHDVGYWAR 520 (831)
Q Consensus 481 ~~~~A~ai~~aL~m~~~er~~r~~~-~~~~v~~~~~~~W~~ 520 (831)
.++++++|.++|+.+.. +.++.+ ..+..........++
T Consensus 343 ~~~l~~ai~~ll~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 381 (391)
T 3tsa_A 343 HEQFTDSIATVLGDTGF--AAAAIKLSDEITAMPHPAALVR 381 (391)
T ss_dssp HHHHHHHHHHHHTCTHH--HHHHHHHHHHHHTSCCHHHHHH
T ss_pred HHHHHHHHHHHHcCHHH--HHHHHHHHHHHHcCCCHHHHHH
Confidence 99999999999986642 233333 344445555555444
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0042 Score=64.36 Aligned_cols=78 Identities=14% Similarity=0.065 Sum_probs=59.5
Q ss_pred CCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCc-hhHHHHHHcchhcCCCCCCCCCceEEEEeCCCC-------cccceE
Q 044635 736 QGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDR-SDEDMFEVIISSMAGPSIAPRAEVFACTVGRKP-------SKAKYY 807 (831)
Q Consensus 736 ~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~-NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~-------s~A~y~ 807 (831)
.+-.|..+++.+++.+ |++++++++|||+. ||+.|.+.+|.. ++.+.-|... ..|+|+
T Consensus 159 ~~Kp~~~~~~~~~~~~---g~~~~~~~~vGD~~~~Di~~a~~aG~~-----------~i~~~~~~~~~~~~~~~~~ad~v 224 (263)
T 3k1z_A 159 WPKPDPRIFQEALRLA---HMEPVVAAHVGDNYLCDYQGPRAVGMH-----------SFLVVGPQALDPVVRDSVPKEHI 224 (263)
T ss_dssp SCTTSHHHHHHHHHHH---TCCGGGEEEEESCHHHHTHHHHTTTCE-----------EEEECCSSCCCHHHHHHSCGGGE
T ss_pred CCCCCHHHHHHHHHHc---CCCHHHEEEECCCcHHHHHHHHHCCCE-----------EEEEcCCCCCchhhcccCCCceE
Confidence 3455678899999998 99999999999996 999999999853 1223223222 268999
Q ss_pred eCChhHHHHHHHHHHhhhcc
Q 044635 808 LDDTVEIVRLMQGLACVADQ 827 (831)
Q Consensus 808 l~d~~eV~~~L~~L~~~~~~ 827 (831)
+++..++.++|+.+...+..
T Consensus 225 ~~~l~el~~~l~~~~~~~~~ 244 (263)
T 3k1z_A 225 LPSLAHLLPALDCLEGSAEN 244 (263)
T ss_dssp ESSGGGHHHHHHHHHHC---
T ss_pred eCCHHHHHHHHHHHHhcCCC
Confidence 99999999999998776443
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=96.32 E-value=0.0026 Score=73.83 Aligned_cols=171 Identities=8% Similarity=-0.082 Sum_probs=97.4
Q ss_pred cEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEE-EEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccE
Q 044635 339 KVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLV-QIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPV 417 (831)
Q Consensus 339 ~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLv-qig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv 417 (831)
..++.+..|+ .|..+..++++.++|++.|+. +.++ .+|. +.+.. ..+.+++.+ ..|. ..|
T Consensus 441 ~v~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s---~L~l~~~g~---~~g~~-~~~~~~~~~--~GI~--------~Rv 501 (631)
T 3q3e_A 441 VVNIGIASTT--MKLNPYFLEALKAIRDRAKVK---VHFHFALGQ---SNGIT-HPYVERFIK--SYLG--------DSA 501 (631)
T ss_dssp EEEEEEEECS--TTCCHHHHHHHHHHHHHCSSE---EEEEEEESS---CCGGG-HHHHHHHHH--HHHG--------GGE
T ss_pred eEEEEECCcc--ccCCHHHHHHHHHHHHhCCCc---EEEEEecCC---Cchhh-HHHHHHHHH--cCCC--------ccE
Confidence 5677777875 699999999999999999963 2222 2342 12222 222233222 1222 135
Q ss_pred EEecCCCCHHHHHHHHHHcCEeEECCCccCC--CCCCCCCceEEEeccccccc------cc---C-CCceeCCCCHHHHH
Q 044635 418 VLIDEPLKFYERIAYYVVAECCLVTAVRDGS--EPSSPKKSMLVVSEFIGCSP------SL---S-GAIRVNPWNIDAVS 485 (831)
Q Consensus 418 ~~~~~~v~~~el~aly~~ADv~vvtS~~eGm--a~~~~~~g~lVlSe~~G~~~------~l---~-~allVnP~d~~~~A 485 (831)
+ |.+.++.++..++|+.||+|+.|+.+.|- ++++...|++|++-.++... .+ + ...+|- .|.++..
T Consensus 502 ~-F~g~~p~~e~la~y~~aDIfLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA-~d~eeYv 579 (631)
T 3q3e_A 502 T-AHPHSPYHQYLRILHNCDMMVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIA-NTVDEYV 579 (631)
T ss_dssp E-EECCCCHHHHHHHHHTCSEEECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEE-SSHHHHH
T ss_pred E-EcCCCCHHHHHHHHhcCcEEEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceec-CCHHHHH
Confidence 4 56789999999999999999999987764 22333346666662221110 11 0 122232 3688888
Q ss_pred HHHHHHhcCCHHHHHHHHHHHhhhhccCC-HHHHHHHHHHHHHHHHH
Q 044635 486 DAMDSALEMADQEKQLRHEKHYRYVSTHD-VGYWARSFLQDLERTCR 531 (831)
Q Consensus 486 ~ai~~aL~m~~~er~~r~~~~~~~v~~~~-~~~W~~~~l~~l~~~~~ 531 (831)
+...++.+.++ .++...+++++.+.+.. ...|.+.|-+.++++.+
T Consensus 580 ~~Av~La~D~~-~l~~LR~~Lr~~~~~spLFd~~~~~~e~~ye~~~~ 625 (631)
T 3q3e_A 580 ERAVRLAENHQ-ERLELRRYIIENNGLNTLFTGDPRPMGQVFLEKLN 625 (631)
T ss_dssp HHHHHHHHCHH-HHHHHHHHHHHSCCHHHHTCSCCTHHHHHHHHHHH
T ss_pred HHHHHHhCCHH-HHHHHHHHHHHHhhhCCCcchhHHHHHHHHHHHHH
Confidence 88888887554 34333444444432210 01455555555555443
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=96.30 E-value=0.0062 Score=67.87 Aligned_cols=97 Identities=9% Similarity=0.002 Sum_probs=58.7
Q ss_pred EEEecCCCCHHHHHHHHHHcCEeEECCC----ccCCCCCCCCCceEEEecccc----ccccc---CCCceeCCC--CHHH
Q 044635 417 VVLIDEPLKFYERIAYYVVAECCLVTAV----RDGSEPSSPKKSMLVVSEFIG----CSPSL---SGAIRVNPW--NIDA 483 (831)
Q Consensus 417 v~~~~~~v~~~el~aly~~ADv~vvtS~----~eGma~~~~~~g~lVlSe~~G----~~~~l---~~allVnP~--d~~~ 483 (831)
|. +.+.+++. .+|+.||++|..+- .|.|++ +.|+|+....| .++.+ ..|+.+++. |+++
T Consensus 285 v~-~~~~~~~~---~~l~~ad~~v~~~G~~t~~Ea~~~----G~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~ 356 (430)
T 2iyf_A 285 VE-VHDWVPQL---AILRQADLFVTHAGAGGSQEGLAT----ATPMIAVPQAVDQFGNADMLQGLGVARKLATEEATADL 356 (430)
T ss_dssp EE-EESSCCHH---HHHTTCSEEEECCCHHHHHHHHHT----TCCEEECCCSHHHHHHHHHHHHTTSEEECCCC-CCHHH
T ss_pred eE-EEecCCHH---HHhhccCEEEECCCccHHHHHHHh----CCCEEECCCccchHHHHHHHHHcCCEEEcCCCCCCHHH
Confidence 54 45577765 68999999988653 234444 45777776544 23333 457888876 8899
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHH
Q 044635 484 VSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSF 522 (831)
Q Consensus 484 ~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~ 522 (831)
++++|.++|+.+ +.++...+..++......+...++.+
T Consensus 357 l~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i 394 (430)
T 2iyf_A 357 LRETALALVDDP-EVARRLRRIQAEMAQEGGTRRAADLI 394 (430)
T ss_dssp HHHHHHHHHHCH-HHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHcCH-HHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 999999999743 33332222333333344444444433
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=96.27 E-value=0.0018 Score=66.42 Aligned_cols=66 Identities=23% Similarity=0.286 Sum_probs=51.6
Q ss_pred CHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC------CcccceEeCChh
Q 044635 739 NKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK------PSKAKYYLDDTV 812 (831)
Q Consensus 739 nKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~------~s~A~y~l~d~~ 812 (831)
.|+.+++.+++.+ |++++++++|||+.||++|++.+|.. ++.|..|.. ...|++++++..
T Consensus 171 p~~~~~~~~~~~~---~~~~~~~~~vGD~~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~ad~vi~~~~ 236 (243)
T 2hsz_A 171 PHPAPFYYLCGKF---GLYPKQILFVGDSQNDIFAAHSAGCA-----------VVGLTYGYNYNIPIAQSKPDWIFDDFA 236 (243)
T ss_dssp TSSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEESSSCSTTCCGGGGCCSEEESSGG
T ss_pred cCHHHHHHHHHHh---CcChhhEEEEcCCHHHHHHHHHCCCe-----------EEEEcCCCCchhhhhhCCCCEEECCHH
Confidence 3678899999998 99999999999999999999999853 234444421 356889999888
Q ss_pred HHHHHH
Q 044635 813 EIVRLM 818 (831)
Q Consensus 813 eV~~~L 818 (831)
++.++|
T Consensus 237 el~~~l 242 (243)
T 2hsz_A 237 DILKIT 242 (243)
T ss_dssp GGGGGT
T ss_pred HHHHHh
Confidence 876554
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=96.22 E-value=0.0092 Score=58.72 Aligned_cols=66 Identities=12% Similarity=-0.007 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeC-CC----CcccceEeCChhHH
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVG-RK----PSKAKYYLDDTVEI 814 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG-~~----~s~A~y~l~d~~eV 814 (831)
|..+++.+++.+ | ++++++|||+.||+.|.+.+|.. ++.+.-| +. ...|++++++..++
T Consensus 130 ~~~~~~~~~~~~---~--~~~~~~vGD~~~Di~~a~~aG~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~el 193 (201)
T 2w43_A 130 SPKVYKYFLDSI---G--AKEAFLVSSNAFDVIGAKNAGMR-----------SIFVNRKNTIVDPIGGKPDVIVNDFKEL 193 (201)
T ss_dssp CHHHHHHHHHHH---T--CSCCEEEESCHHHHHHHHHTTCE-----------EEEECSSSCCCCTTSCCCSEEESSHHHH
T ss_pred CHHHHHHHHHhc---C--CCcEEEEeCCHHHhHHHHHCCCE-----------EEEECCCCCCccccCCCCCEEECCHHHH
Confidence 489999999998 7 89999999999999999999853 1222222 21 24688999999999
Q ss_pred HHHHHHH
Q 044635 815 VRLMQGL 821 (831)
Q Consensus 815 ~~~L~~L 821 (831)
.++|..+
T Consensus 194 ~~~l~~~ 200 (201)
T 2w43_A 194 YEWILRY 200 (201)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9888764
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=96.16 E-value=0.012 Score=64.43 Aligned_cols=136 Identities=10% Similarity=-0.021 Sum_probs=81.3
Q ss_pred CcEEEEeccCcccc-------cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCC
Q 044635 338 GKVMLLGVDDMDIF-------KGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFG 410 (831)
Q Consensus 338 ~~~iil~VdRld~~-------KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g 410 (831)
...+++++|++... +.+...++|++++ +++ ++.++ ++++. +++.. +.
T Consensus 210 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-----~~~----~~~~~-----g~~~~----~~l~~----~~---- 263 (384)
T 2p6p_A 210 RQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-----DVE----LIVAA-----PDTVA----EALRA----EV---- 263 (384)
T ss_dssp SCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-----TCE----EEEEC-----CHHHH----HHHHH----HC----
T ss_pred CCEEEEECCCCCccccccccHHHHHHHHHHHhcC-----CcE----EEEEe-----CCCCH----HhhCC----CC----
Confidence 35789999999875 5677778777542 332 54443 11221 22221 11
Q ss_pred CCCCccEEEecCCCCHHHHHHHHHHcCEeEECC----CccCCCCCCCCCceEEEecccc----ccccc---CCCceeCCC
Q 044635 411 KPGYDPVVLIDEPLKFYERIAYYVVAECCLVTA----VRDGSEPSSPKKSMLVVSEFIG----CSPSL---SGAIRVNPW 479 (831)
Q Consensus 411 ~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS----~~eGma~~~~~~g~lVlSe~~G----~~~~l---~~allVnP~ 479 (831)
. .|. + +.+++.+ +|..||++|..+ +.|.|++ +.|+|+....+ .+..+ ..|+.+++.
T Consensus 264 -~---~v~-~-~~~~~~~---~l~~~d~~v~~~G~~t~~Ea~~~----G~P~v~~p~~~dq~~~a~~~~~~g~g~~~~~~ 330 (384)
T 2p6p_A 264 -P---QAR-V-GWTPLDV---VAPTCDLLVHHAGGVSTLTGLSA----GVPQLLIPKGSVLEAPARRVADYGAAIALLPG 330 (384)
T ss_dssp -T---TSE-E-ECCCHHH---HGGGCSEEEECSCTTHHHHHHHT----TCCEEECCCSHHHHHHHHHHHHHTSEEECCTT
T ss_pred -C---ceE-E-cCCCHHH---HHhhCCEEEeCCcHHHHHHHHHh----CCCEEEccCcccchHHHHHHHHCCCeEecCcC
Confidence 0 233 3 6677644 678999999864 2344444 45777765533 33333 457888775
Q ss_pred --CHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCC
Q 044635 480 --NIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHD 514 (831)
Q Consensus 480 --d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 514 (831)
+.++++++|.++|+.+ +.++++.+..+.+...+
T Consensus 331 ~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~ 365 (384)
T 2p6p_A 331 EDSTEAIADSCQELQAKD--TYARRAQDLSREISGMP 365 (384)
T ss_dssp CCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTSC
T ss_pred CCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHhCC
Confidence 7899999999999853 34445555555554443
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=96.16 E-value=0.0023 Score=64.66 Aligned_cols=61 Identities=18% Similarity=0.294 Sum_probs=38.8
Q ss_pred CHHHHHHHHHhcCceeEEecCCCccCCCCCC-------------------------------CCCCCHHHHHHHHHHhhc
Q 044635 560 SMEHIVSAYKRTTTRAILLDYDGTLMPQASI-------------------------------DKSPNSKTIDILNSLCRD 608 (831)
Q Consensus 560 ~~~~~~~~y~~s~~rli~~D~DGTLl~~~~~-------------------------------~~~~s~~~~~~L~~L~~d 608 (831)
+++++...-...++|+|+||+||||++.... ...+.+.+.++|+.|.+
T Consensus 24 ~~~~i~~~~~~~~~kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L~~- 102 (211)
T 2b82_A 24 SVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVR- 102 (211)
T ss_dssp CHHHHHHHTTTCCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHH-
T ss_pred eHhhHhhhcccCCCCEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHHHH-
Confidence 3555554333445899999999999983110 00123466777777765
Q ss_pred CCCeEEEECCCCH
Q 044635 609 KNNMVFLVSAKSR 621 (831)
Q Consensus 609 ~g~~V~I~SGR~~ 621 (831)
.|..++|+|+++.
T Consensus 103 ~G~~l~ivTn~~~ 115 (211)
T 2b82_A 103 RGDAIFFVTGRSP 115 (211)
T ss_dssp HTCEEEEEECSCC
T ss_pred CCCEEEEEcCCcH
Confidence 3777777777764
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.11 E-value=0.0047 Score=75.46 Aligned_cols=171 Identities=12% Similarity=0.143 Sum_probs=104.2
Q ss_pred HHHHHHHHHhcCceeEEecCC-------------CccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHH
Q 044635 561 MEHIVSAYKRTTTRAILLDYD-------------GTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEW 627 (831)
Q Consensus 561 ~~~~~~~y~~s~~rli~~D~D-------------GTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~ 627 (831)
.....+.|.+...|.+++=++ .+++..-.....|-+++.+++++|.+ .|+.++++||.........
T Consensus 443 ~~~~~~~~a~~G~rvl~vA~~~~~~~~~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~-aGI~v~MiTGD~~~tA~~i 521 (885)
T 3b8c_A 443 VLSIIDKYAERGLRSLAVARQVVPEKTKESPGAPWEFVGLLPLFDPPRHDSAETIRRALN-LGVNVKMITGDQLAIGKET 521 (885)
T ss_dssp HHHHHHHHTTTTCEEEEECCBCCCSSSSSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHH-TTCCCEEEESSCHHHHTHH
T ss_pred HHHHHHHHHhCCCeEEEEEEeccccccccccccCcEEEEEEEeecccchhHHHHHHHHHH-cCCcEEEEcCCChHHHHHH
Confidence 455566676677788877664 23332111234678999999999977 5999999999999988888
Q ss_pred hCCCCCceEEecCCEEEEeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHH
Q 044635 628 FSPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAK 707 (831)
Q Consensus 628 ~~~~~~~~liaenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~ 707 (831)
.+++ ++.. +. .+ ...+ .|...+.. .. +.+ ..
T Consensus 522 A~~l---Gi~~-~~----~~-~~~l--------------------------~g~~~~~~-------~~--~~~-----l~ 552 (885)
T 3b8c_A 522 GRRL---GMGT-NM----YP-SSAL--------------------------LGTHKDAN-------LA--SIP-----VE 552 (885)
T ss_dssp HHTT---TCTT-CC----ST-TSSC--------------------------CBGGGGTT-------SC--CSC-----HH
T ss_pred HHHh---CCcc-cc----CC-ccee--------------------------eccccccc-------cc--hhH-----HH
Confidence 7754 2211 00 00 0000 00000000 00 011 11
Q ss_pred HHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCC
Q 044635 708 ELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIA 787 (831)
Q Consensus 708 el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~ 787 (831)
+ .+.+.. -+-++.|. +|...++.+.+. | +.|.++||+.||.+||+.++
T Consensus 553 ~-------~~~~~~-------v~arv~P~--~K~~iV~~lq~~----g---~~Vam~GDGvNDapaLk~Ad--------- 600 (885)
T 3b8c_A 553 E-------LIEKAD-------GFAGVFPE--HKYEIVKKLQER----K---HIVGMTGDGVNDAPALKKAD--------- 600 (885)
T ss_dssp H-------HHHTSC-------CEECCCHH--HHHHHHHHHHHT----T---CCCCBCCCSSTTHHHHHHSS---------
T ss_pred H-------HHhhCc-------EEEEECHH--HHHHHHHHHHHC----C---CeEEEEcCCchhHHHHHhCC---------
Confidence 1 112211 23346665 799999999764 4 56899999999999999997
Q ss_pred CCCceEEEEeCCC----CcccceEeC--ChhHHHHHH
Q 044635 788 PRAEVFACTVGRK----PSKAKYYLD--DTVEIVRLM 818 (831)
Q Consensus 788 ~~~~~~~v~vG~~----~s~A~y~l~--d~~eV~~~L 818 (831)
++++||+. +..|++++. +...+.+++
T Consensus 601 -----vGIAmg~gtd~ak~aADivl~~~~~~~I~~ai 632 (885)
T 3b8c_A 601 -----IGIAVADATDAARGASDIVLTEPGLSVIISAV 632 (885)
T ss_dssp -----SCCCCSSSHHHHGGGCSSCCSSCSHHHHTHHH
T ss_pred -----EeEEeCCccHHHHHhcceeeccCchhHHHHHH
Confidence 46677754 467888874 455565544
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.95 E-value=0.0035 Score=60.47 Aligned_cols=120 Identities=11% Similarity=0.115 Sum_probs=75.0
Q ss_pred CCcEEEEeccCcc---cccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCC
Q 044635 337 QGKVMLLGVDDMD---IFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPG 413 (831)
Q Consensus 337 ~~~~iil~VdRld---~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~ 413 (831)
....+++++|++. +.|++...++|+.++ + ++ ++.++.+.. .+ ...
T Consensus 20 ~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~----~-~~----~~~~~g~~~---~~-----------------~~~--- 67 (170)
T 2o6l_A 20 ENGVVVFSLGSMVSNMTEERANVIASALAQI----P-QK----VLWRFDGNK---PD-----------------TLG--- 67 (170)
T ss_dssp TTCEEEEECCSCCTTCCHHHHHHHHHHHTTS----S-SE----EEEECCSSC---CT-----------------TCC---
T ss_pred CCCEEEEECCCCcccCCHHHHHHHHHHHHhC----C-Ce----EEEEECCcC---cc-----------------cCC---
Confidence 3467999999994 778888888887542 2 22 444442211 00 011
Q ss_pred CccEEEecCCCCHHHHHHHHHHcCEeEECC----CccCCCCCCCCCceEEEecccc----ccccc---CCCceeCCC--C
Q 044635 414 YDPVVLIDEPLKFYERIAYYVVAECCLVTA----VRDGSEPSSPKKSMLVVSEFIG----CSPSL---SGAIRVNPW--N 480 (831)
Q Consensus 414 ~~pv~~~~~~v~~~el~aly~~ADv~vvtS----~~eGma~~~~~~g~lVlSe~~G----~~~~l---~~allVnP~--d 480 (831)
..|. +.+.+++.++.++ ..||++|..+ +.|.|++ +.|+|+..+.+ .+..+ ..|+.+++. +
T Consensus 68 -~~v~-~~~~~~~~~~l~~-~~ad~~I~~~G~~t~~Ea~~~----G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~ 140 (170)
T 2o6l_A 68 -LNTR-LYKWIPQNDLLGH-PKTRAFITHGGANGIYEAIYH----GIPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMS 140 (170)
T ss_dssp -TTEE-EESSCCHHHHHTS-TTEEEEEECCCHHHHHHHHHH----TCCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCC
T ss_pred -CcEE-EecCCCHHHHhcC-CCcCEEEEcCCccHHHHHHHc----CCCEEeccchhhHHHHHHHHHHcCCeEEeccccCC
Confidence 1244 4568888777654 9999999743 3333444 45677776532 23333 457888876 7
Q ss_pred HHHHHHHHHHHhcCC
Q 044635 481 IDAVSDAMDSALEMA 495 (831)
Q Consensus 481 ~~~~A~ai~~aL~m~ 495 (831)
.++++++|.++|+.+
T Consensus 141 ~~~l~~~i~~ll~~~ 155 (170)
T 2o6l_A 141 STDLLNALKRVINDP 155 (170)
T ss_dssp HHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHcCH
Confidence 899999999999743
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=95.77 E-value=0.038 Score=60.43 Aligned_cols=149 Identities=9% Similarity=-0.001 Sum_probs=77.6
Q ss_pred CcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccE
Q 044635 338 GKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPV 417 (831)
Q Consensus 338 ~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv 417 (831)
...+++..|++...+.-....+|++++ +.-. ++.++.++.. ..++.+++... ..+. ++
T Consensus 180 ~~~ilv~gGs~g~~~~~~~~~~al~~l----~~~~-~~~vi~~~G~-----~~~~~~~~~~~----~~~~--------~~ 237 (365)
T 3s2u_A 180 RVNLLVLGGSLGAEPLNKLLPEALAQV----PLEI-RPAIRHQAGR-----QHAEITAERYR----TVAV--------EA 237 (365)
T ss_dssp CCEEEECCTTTTCSHHHHHHHHHHHTS----CTTT-CCEEEEECCT-----TTHHHHHHHHH----HTTC--------CC
T ss_pred CcEEEEECCcCCccccchhhHHHHHhc----cccc-ceEEEEecCc-----cccccccceec----cccc--------cc
Confidence 346777778887666555555665544 3222 2334433311 12333333322 2211 12
Q ss_pred EEecCCCCHHHHHHHHHHcCEeEECC----CccCCCCCCCCCceEEEecccccc--------ccc---CCCceeCCC--C
Q 044635 418 VLIDEPLKFYERIAYYVVAECCLVTA----VRDGSEPSSPKKSMLVVSEFIGCS--------PSL---SGAIRVNPW--N 480 (831)
Q Consensus 418 ~~~~~~v~~~el~aly~~ADv~vvtS----~~eGma~~~~~~g~lVlSe~~G~~--------~~l---~~allVnP~--d 480 (831)
.+ .+++ +++..+|+.||++|..| +.|-|++ +-|.|+..+.++. ..+ ..|++++.. +
T Consensus 238 ~v-~~f~--~dm~~~l~~aDlvI~raG~~Tv~E~~a~----G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~ 310 (365)
T 3s2u_A 238 DV-APFI--SDMAAAYAWADLVICRAGALTVSELTAA----GLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTG 310 (365)
T ss_dssp EE-ESCC--SCHHHHHHHCSEEEECCCHHHHHHHHHH----TCCEEECC-----CCHHHHHHHHHHTTTSEEECCTTTCC
T ss_pred cc-ccch--hhhhhhhccceEEEecCCcchHHHHHHh----CCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCCCC
Confidence 22 2343 47899999999998744 2333344 3466665554332 223 346777654 5
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHH
Q 044635 481 IDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGY 517 (831)
Q Consensus 481 ~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 517 (831)
+++++++|.++|+.|+ ++.+|....+.+...+...
T Consensus 311 ~~~L~~~i~~ll~d~~--~~~~m~~~a~~~~~~~aa~ 345 (365)
T 3s2u_A 311 AAELAAQLSEVLMHPE--TLRSMADQARSLAKPEATR 345 (365)
T ss_dssp HHHHHHHHHHHHHCTH--HHHHHHHHHHHTCCTTHHH
T ss_pred HHHHHHHHHHHHCCHH--HHHHHHHHHHhcCCccHHH
Confidence 8999999999998763 3334444333344444433
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=95.68 E-value=0.0073 Score=59.69 Aligned_cols=69 Identities=13% Similarity=0.044 Sum_probs=51.2
Q ss_pred EeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCC---c-ccceE-e
Q 044635 734 KPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKP---S-KAKYY-L 808 (831)
Q Consensus 734 ~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~---s-~A~y~-l 808 (831)
+|+...|..+++.+. ..++++++|||+.||+.|.+.+|. ++.++..+ . .+.+. +
T Consensus 128 ~p~p~~~~~~l~~l~-------~~~~~~~~iGD~~~Di~~a~~aG~--------------~~~~~~~~~~~~~~~~~~~~ 186 (206)
T 1rku_A 128 LRQKDPKRQSVIAFK-------SLYYRVIAAGDSYNDTTMLSEAHA--------------GILFHAPENVIREFPQFPAV 186 (206)
T ss_dssp CCSSSHHHHHHHHHH-------HTTCEEEEEECSSTTHHHHHHSSE--------------EEEESCCHHHHHHCTTSCEE
T ss_pred cCCCchHHHHHHHHH-------hcCCEEEEEeCChhhHHHHHhcCc--------------cEEECCcHHHHHHHhhhccc
Confidence 488888888887763 356899999999999999999984 34454331 2 23443 7
Q ss_pred CChhHHHHHHHHHHh
Q 044635 809 DDTVEIVRLMQGLAC 823 (831)
Q Consensus 809 ~d~~eV~~~L~~L~~ 823 (831)
++..++.++|+.+..
T Consensus 187 ~~~~~l~~~l~~~~~ 201 (206)
T 1rku_A 187 HTYEDLKREFLKASS 201 (206)
T ss_dssp CSHHHHHHHHHHHCS
T ss_pred cchHHHHHHHHHHhc
Confidence 899999999887654
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=95.32 E-value=0.032 Score=57.19 Aligned_cols=67 Identities=16% Similarity=0.154 Sum_probs=53.6
Q ss_pred HHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC--CcccceEeCChhHH-HHH
Q 044635 741 GLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK--PSKAKYYLDDTVEI-VRL 817 (831)
Q Consensus 741 G~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~--~s~A~y~l~d~~eV-~~~ 817 (831)
-.....+++.+ |++|+++++|||+.+|+.+-+.+|. .+|.|++. .+.|+|++++..|+ .+.
T Consensus 173 p~~~~~a~~~l---g~~p~e~l~VGDs~~Di~aA~~aG~-------------~~i~v~~~~~~~~ad~vi~~l~eL~~~~ 236 (250)
T 4gib_A 173 PEIFLMSAKGL---NVNPQNCIGIEDASAGIDAINSANM-------------FSVGVGNYENLKKANLVVDSTNQLKFEY 236 (250)
T ss_dssp SHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHTTC-------------EEEEESCTTTTTTSSEEESSGGGCCHHH
T ss_pred HHHHHHHHHHh---CCChHHeEEECCCHHHHHHHHHcCC-------------EEEEECChhHhccCCEEECChHhCCHHH
Confidence 35677788888 9999999999999999999888874 46777764 46799999999887 566
Q ss_pred HHHHHh
Q 044635 818 MQGLAC 823 (831)
Q Consensus 818 L~~L~~ 823 (831)
|+++.+
T Consensus 237 i~~~~n 242 (250)
T 4gib_A 237 IQEKYN 242 (250)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666543
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=95.12 E-value=0.014 Score=56.94 Aligned_cols=50 Identities=16% Similarity=0.290 Sum_probs=38.2
Q ss_pred HhcCceeEEecCCCccCCCCC--------CCCCCCHHHHHHHHHHhhcCCCeEEEECCC
Q 044635 569 KRTTTRAILLDYDGTLMPQAS--------IDKSPNSKTIDILNSLCRDKNNMVFLVSAK 619 (831)
Q Consensus 569 ~~s~~rli~~D~DGTLl~~~~--------~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR 619 (831)
..+..|++++|+||||+...+ ....+.+.+.++|+.|.+ .|..++|+|+.
T Consensus 10 ~~~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~-~G~~l~i~Tn~ 67 (176)
T 2fpr_A 10 HGSSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQK-AGYKLVMITNQ 67 (176)
T ss_dssp ---CCEEEEECSBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHHHH-TTEEEEEEEEC
T ss_pred cCCcCcEEEEeCCCCeEcCCCCCcCcCCHHHCcCCccHHHHHHHHHH-CCCEEEEEECC
Confidence 346789999999999987421 123467899999999977 58999999997
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=94.63 E-value=0.016 Score=57.01 Aligned_cols=20 Identities=20% Similarity=0.255 Sum_probs=17.2
Q ss_pred HHHhhhcCCCcccEEEEcCCchh
Q 044635 748 LSTMQEREMLPDFVLCVGDDRSD 770 (831)
Q Consensus 748 l~~l~~~g~~~d~vla~GD~~ND 770 (831)
++.+ |++++++++|||+.+|
T Consensus 123 ~~~~---~~~~~~~~~vgDs~~d 142 (193)
T 2i7d_A 123 VERI---ILTRDKTVVLGDLLID 142 (193)
T ss_dssp HTTE---EECSCGGGBCCSEEEE
T ss_pred HHHc---CCCcccEEEECCchhh
Confidence 4555 8889999999999999
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=94.47 E-value=0.014 Score=60.59 Aligned_cols=58 Identities=14% Similarity=0.285 Sum_probs=42.8
Q ss_pred CceeEEecCCCccCCCCC-----------------------CCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHh----hH
Q 044635 572 TTRAILLDYDGTLMPQAS-----------------------IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRK----TL 624 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~-----------------------~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~----~l 624 (831)
++.+++||+||||++... ....+-+.+.++|+.|.+ .|..++|+|||+.. ..
T Consensus 57 ~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~ell~~L~~-~G~~i~ivTgR~~~~~r~~T 135 (260)
T 3pct_A 57 KKKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVNA-NGGTMFFVSNRRDDVEKAGT 135 (260)
T ss_dssp -CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHHHHHHHH-TTCEEEEEEEEETTTSHHHH
T ss_pred CCCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHHHHHHHH-CCCeEEEEeCCCccccHHHH
Confidence 446999999999997421 012345688899999977 59999999999754 66
Q ss_pred HHHhCC
Q 044635 625 AEWFSP 630 (831)
Q Consensus 625 ~~~~~~ 630 (831)
..++..
T Consensus 136 ~~~L~~ 141 (260)
T 3pct_A 136 VDDMKR 141 (260)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666654
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=94.34 E-value=0.016 Score=60.36 Aligned_cols=59 Identities=14% Similarity=0.237 Sum_probs=43.6
Q ss_pred cCceeEEecCCCccCCCCC-----------------------CCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHh----h
Q 044635 571 TTTRAILLDYDGTLMPQAS-----------------------IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRK----T 623 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~-----------------------~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~----~ 623 (831)
.++.+++||+||||++... ....+-+.+.++|+.|.+ .|..++|+|||+.. .
T Consensus 56 ~~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~~~~~~~pG~~ell~~L~~-~G~ki~ivTgR~~~~~r~~ 134 (262)
T 3ocu_A 56 GKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNS-HNGKVFYVTNRKDSTEKSG 134 (262)
T ss_dssp TCEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHHTCCEECTTHHHHHHHHHH-TTEEEEEEEEEETTTTHHH
T ss_pred CCCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHcCCCCCCccHHHHHHHHHH-CCCeEEEEeCCCccchHHH
Confidence 4567999999999998421 011234678889999977 59999999999764 6
Q ss_pred HHHHhCC
Q 044635 624 LAEWFSP 630 (831)
Q Consensus 624 l~~~~~~ 630 (831)
...++..
T Consensus 135 T~~~L~~ 141 (262)
T 3ocu_A 135 TIDDMKR 141 (262)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666654
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=94.07 E-value=0.092 Score=54.22 Aligned_cols=69 Identities=14% Similarity=0.183 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCC-chhHHHHHHcchhcCCCCCCCCCceEEEEeCCC-------CcccceEeCCh
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDD-RSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK-------PSKAKYYLDDT 811 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~-~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~-------~s~A~y~l~d~ 811 (831)
+....+.+++.+ |++++++++|||+ .+|+.+.+.+|.. .+|.++.. ...|+|++++.
T Consensus 178 ~p~~~~~~~~~~---~~~~~~~~~vGDs~~~Di~~A~~aG~~------------~~i~v~~~~~~~~~~~~~~~~~i~~~ 242 (260)
T 2gfh_A 178 APSIFYHCCDLL---GVQPGDCVMVGDTLETDIQGGLNAGLK------------ATVWINKSGRVPLTSSPMPHYMVSSV 242 (260)
T ss_dssp CHHHHHHHHHHH---TCCGGGEEEEESCTTTHHHHHHHTTCS------------EEEEECTTCCCCSSCCCCCSEEESSG
T ss_pred CHHHHHHHHHHc---CCChhhEEEECCCchhhHHHHHHCCCc------------eEEEEcCCCCCcCcccCCCCEEECCH
Confidence 366888888888 9999999999996 9999999999841 13334321 24688999999
Q ss_pred hHHHHHHHHHHh
Q 044635 812 VEIVRLMQGLAC 823 (831)
Q Consensus 812 ~eV~~~L~~L~~ 823 (831)
.++..+|+.+..
T Consensus 243 ~el~~~l~~~~~ 254 (260)
T 2gfh_A 243 LELPALLQSIDC 254 (260)
T ss_dssp GGHHHHHHHHTT
T ss_pred HHHHHHHHHHhh
Confidence 999999987753
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=93.80 E-value=0.082 Score=52.28 Aligned_cols=69 Identities=12% Similarity=0.181 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCC-----cccceEeCChhHH
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKP-----SKAKYYLDDTVEI 814 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~-----s~A~y~l~d~~eV 814 (831)
+....+.+++.+ |++|+++++|||+.+|+.+-+.+|.. .+++|+.|..+ ....+.+.+++++
T Consensus 142 ~p~~~~~a~~~l---g~~p~e~l~VgDs~~Di~aA~~aG~~----------~i~~v~~g~~~~~~l~~~~~~~i~~~~el 208 (216)
T 3kbb_A 142 DPEIYLLVLERL---NVVPEKVVVFEDSKSGVEAAKSAGIE----------RIYGVVHSLNDGKALLEAGAVALVKPEEI 208 (216)
T ss_dssp STHHHHHHHHHH---TCCGGGEEEEECSHHHHHHHHHTTCC----------CEEEECCSSSCCHHHHHTTCSEEECGGGH
T ss_pred cHHHHHHHHHhh---CCCccceEEEecCHHHHHHHHHcCCc----------EEEEecCCCCCHHHHHhCCCcEECCHHHH
Confidence 346778888888 99999999999999999999998842 23466666432 2223455578999
Q ss_pred HHHHHHH
Q 044635 815 VRLMQGL 821 (831)
Q Consensus 815 ~~~L~~L 821 (831)
++.|+.|
T Consensus 209 i~~l~eL 215 (216)
T 3kbb_A 209 LNVLKEV 215 (216)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999876
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=93.71 E-value=0.037 Score=53.40 Aligned_cols=40 Identities=13% Similarity=-0.069 Sum_probs=35.7
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 735 PQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 735 p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
+.+..|+.+++.+++++ |++ ++++|||+.||++|++.+|.
T Consensus 134 ~~~kp~~~~~~~~~~~~---~~~--~~~~iGD~~~Di~~a~~aG~ 173 (190)
T 2fi1_A 134 FKRKPNPESMLYLREKY---QIS--SGLVIGDRPIDIEAGQAAGL 173 (190)
T ss_dssp CCCTTSCHHHHHHHHHT---TCS--SEEEEESSHHHHHHHHHTTC
T ss_pred CCCCCCHHHHHHHHHHc---CCC--eEEEEcCCHHHHHHHHHcCC
Confidence 45667899999999998 887 89999999999999999984
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=93.60 E-value=0.057 Score=54.75 Aligned_cols=67 Identities=15% Similarity=0.115 Sum_probs=49.1
Q ss_pred CCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----Cc-ccceEeCCh
Q 044635 737 GVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PS-KAKYYLDDT 811 (831)
Q Consensus 737 gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s-~A~y~l~d~ 811 (831)
+..|..+++.+ +++++.+++|||+.+|+.|.+.+|.. ++..|.. .. .|.+++++.
T Consensus 149 ~~~K~~~~~~~-------~~~~~~~~~vGDs~~Di~~a~~aG~~-------------~~~~~~~~~~~~~~~~~~~~~~~ 208 (236)
T 2fea_A 149 GCCKPSVIHEL-------SEPNQYIIMIGDSVTDVEAAKLSDLC-------------FARDYLLNECREQNLNHLPYQDF 208 (236)
T ss_dssp SSCHHHHHHHH-------CCTTCEEEEEECCGGGHHHHHTCSEE-------------EECHHHHHHHHHTTCCEECCSSH
T ss_pred CCcHHHHHHHH-------hccCCeEEEEeCChHHHHHHHhCCee-------------eechHHHHHHHHCCCCeeecCCH
Confidence 34577776654 78899999999999999999999842 2211211 11 277889999
Q ss_pred hHHHHHHHHHHh
Q 044635 812 VEIVRLMQGLAC 823 (831)
Q Consensus 812 ~eV~~~L~~L~~ 823 (831)
.++.++|..+.+
T Consensus 209 ~el~~~l~~~~~ 220 (236)
T 2fea_A 209 YEIRKEIENVKE 220 (236)
T ss_dssp HHHHHHHHTSHH
T ss_pred HHHHHHHHHhHH
Confidence 999999887644
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=93.38 E-value=0.046 Score=61.02 Aligned_cols=49 Identities=18% Similarity=0.249 Sum_probs=38.4
Q ss_pred cCceeEEecCCCccCCCCCC--------C-CCCCHHHHHHHHHHhhcCCCeEEEECCCC
Q 044635 571 TTTRAILLDYDGTLMPQASI--------D-KSPNSKTIDILNSLCRDKNNMVFLVSAKS 620 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~~--------~-~~~s~~~~~~L~~L~~d~g~~V~I~SGR~ 620 (831)
...|+++||+||||+...+. + ..+.+.+.++|+.|.+ .|..++|+|+++
T Consensus 56 ~~~k~v~fD~DGTL~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~-~G~~l~IvTN~~ 113 (416)
T 3zvl_A 56 PQGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAA-EGYKLVIFTNQM 113 (416)
T ss_dssp CCSSEEEECSBTTTEECSSCSSSCSSTTCCEESCTTHHHHHHHHHH-TTCEEEEEEECH
T ss_pred CCCeEEEEeCCCCccccCCCccCCCCHHHhhhhcccHHHHHHHHHH-CCCeEEEEeCCc
Confidence 35799999999999863210 0 1256899999999977 599999999966
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=93.30 E-value=0.052 Score=60.75 Aligned_cols=134 Identities=8% Similarity=-0.012 Sum_probs=74.9
Q ss_pred cEEEEeccCcccc-----cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCC
Q 044635 339 KVMLLGVDDMDIF-----KGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPG 413 (831)
Q Consensus 339 ~~iil~VdRld~~-----KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~ 413 (831)
..|+++.|++... |++...++|+..+ +++ +|.++.. .+.++++ ...
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~~~----~v~~~g~-----~~~~~l~------------~~~--- 318 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV-----DAE----IIATFDA-----QQLEGVA------------NIP--- 318 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS-----SSE----EEECCCT-----TTTSSCS------------SCC---
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC-----CCE----EEEEECC-----cchhhhc------------cCC---
Confidence 5689999999864 8888888887643 222 4443321 1110110 011
Q ss_pred CccEEEecCCCCHHHHHHHHHHcCEeEECC----CccCCCCCCCCCceEEEecccc----ccccc---CCCceeCCC--C
Q 044635 414 YDPVVLIDEPLKFYERIAYYVVAECCLVTA----VRDGSEPSSPKKSMLVVSEFIG----CSPSL---SGAIRVNPW--N 480 (831)
Q Consensus 414 ~~pv~~~~~~v~~~el~aly~~ADv~vvtS----~~eGma~~~~~~g~lVlSe~~G----~~~~l---~~allVnP~--d 480 (831)
..| .+.+.+++.+ +|..||++|..+ +.|.|++ +.|+|+..+.+ .+..+ ..|+.+++. +
T Consensus 319 -~~v-~~~~~~~~~~---ll~~ad~~V~~~G~~t~~Ea~~~----G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~ 389 (441)
T 2yjn_A 319 -DNV-RTVGFVPMHA---LLPTCAATVHHGGPGSWHTAAIH----GVPQVILPDGWDTGVRAQRTQEFGAGIALPVPELT 389 (441)
T ss_dssp -SSE-EECCSCCHHH---HGGGCSEEEECCCHHHHHHHHHT----TCCEEECCCSHHHHHHHHHHHHHTSEEECCTTTCC
T ss_pred -CCE-EEecCCCHHH---HHhhCCEEEECCCHHHHHHHHHh----CCCEEEeCCcccHHHHHHHHHHcCCEEEcccccCC
Confidence 124 4556788754 579999999742 3344444 45777776633 23333 457888875 8
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcc
Q 044635 481 IDAVSDAMDSALEMADQEKQLRHEKHYRYVST 512 (831)
Q Consensus 481 ~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 512 (831)
.++++++|.++|+.+ +.+.++.+..+.+..
T Consensus 390 ~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~ 419 (441)
T 2yjn_A 390 PDQLRESVKRVLDDP--AHRAGAARMRDDMLA 419 (441)
T ss_dssp HHHHHHHHHHHHHCH--HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCH--HHHHHHHHHHHHHHc
Confidence 899999999999753 334444544444433
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=93.30 E-value=0.084 Score=51.87 Aligned_cols=38 Identities=13% Similarity=0.115 Sum_probs=34.2
Q ss_pred CHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 739 NKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 739 nKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
.+..+.+.+++.+ |++++++++|||+.||+.|.+.+|.
T Consensus 151 p~~~~~~~~~~~~---~~~~~~~~~igD~~~Di~~a~~aG~ 188 (211)
T 2i6x_A 151 PNEDIFLEMIADS---GMKPEETLFIDDGPANVATAERLGF 188 (211)
T ss_dssp TSHHHHHHHHHHH---CCCGGGEEEECSCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHh---CCChHHeEEeCCCHHHHHHHHHcCC
Confidence 3456889999998 9999999999999999999999984
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=93.19 E-value=0.16 Score=55.41 Aligned_cols=94 Identities=13% Similarity=0.094 Sum_probs=57.6
Q ss_pred EEEecCCCCHHHHHHHHHHcCEeEECCC----ccCCCCCCCCCceEEEecc-c----cccccc---CCCceeCCC--CHH
Q 044635 417 VVLIDEPLKFYERIAYYVVAECCLVTAV----RDGSEPSSPKKSMLVVSEF-I----GCSPSL---SGAIRVNPW--NID 482 (831)
Q Consensus 417 v~~~~~~v~~~el~aly~~ADv~vvtS~----~eGma~~~~~~g~lVlSe~-~----G~~~~l---~~allVnP~--d~~ 482 (831)
|. +.+.+++. .++..||++|..+- .|.|++ +.|+|+.-. . +.+..+ ..|+.+++. +.+
T Consensus 283 v~-~~~~~~~~---~ll~~ad~~v~~~G~~t~~Ea~~~----G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~~~~~ 354 (402)
T 3ia7_A 283 VE-AHQWIPFH---SVLAHARACLTHGTTGAVLEAFAA----GVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQLEPA 354 (402)
T ss_dssp EE-EESCCCHH---HHHTTEEEEEECCCHHHHHHHHHT----TCCEEECGGGCGGGHHHHHHHHHTTSEEECCGGGCSHH
T ss_pred EE-EecCCCHH---HHHhhCCEEEECCCHHHHHHHHHh----CCCEEEeCCCcccHHHHHHHHHHcCCEEEccCCCCCHH
Confidence 44 45577765 78889999998763 344444 446664433 2 333333 356778776 899
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhhhhcc-CCHHHHHH
Q 044635 483 AVSDAMDSALEMADQEKQLRHEKHYRYVST-HDVGYWAR 520 (831)
Q Consensus 483 ~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~ 520 (831)
+++++|.++|+.+ +.+.++++..+.+.. .....-++
T Consensus 355 ~l~~~~~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 391 (402)
T 3ia7_A 355 SIREAVERLAADS--AVRERVRRMQRDILSSGGPARAAD 391 (402)
T ss_dssp HHHHHHHHHHHCH--HHHHHHHHHHHHHHTSCHHHHHHH
T ss_pred HHHHHHHHHHcCH--HHHHHHHHHHHHHhhCChHHHHHH
Confidence 9999999999854 334444444444433 33444444
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=92.80 E-value=0.49 Score=51.90 Aligned_cols=94 Identities=13% Similarity=-0.061 Sum_probs=56.2
Q ss_pred EEEecCCCCHHHHHHHHHHcCEeEECCC----ccCCCCCCCCCceEEEeccc----cccccc---CCCceeCCC--CHHH
Q 044635 417 VVLIDEPLKFYERIAYYVVAECCLVTAV----RDGSEPSSPKKSMLVVSEFI----GCSPSL---SGAIRVNPW--NIDA 483 (831)
Q Consensus 417 v~~~~~~v~~~el~aly~~ADv~vvtS~----~eGma~~~~~~g~lVlSe~~----G~~~~l---~~allVnP~--d~~~ 483 (831)
+.+ .+.+++. .++..||++|..+- .|.+++ +.|+|+--.. +.+..+ ..|+.+++. +.++
T Consensus 299 v~~-~~~~~~~---~ll~~ad~~v~~~G~~t~~Ea~~~----G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~~~~~ 370 (415)
T 3rsc_A 299 VEA-HRWVPHV---KVLEQATVCVTHGGMGTLMEALYW----GRPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKADGDT 370 (415)
T ss_dssp EEE-ESCCCHH---HHHHHEEEEEESCCHHHHHHHHHT----TCCEEECCCSGGGHHHHHHHHHHTCEEECCGGGCCHHH
T ss_pred EEE-EecCCHH---HHHhhCCEEEECCcHHHHHHHHHh----CCCEEEeCCcchHHHHHHHHHHcCCEEEcccCCCCHHH
Confidence 544 4677765 77889999998763 344444 4466663332 223333 456777765 8899
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhhhcc-CCHHHHHH
Q 044635 484 VSDAMDSALEMADQEKQLRHEKHYRYVST-HDVGYWAR 520 (831)
Q Consensus 484 ~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~ 520 (831)
++++|.++|+.+ +.+.++++..+.+.. ......++
T Consensus 371 l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 406 (415)
T 3rsc_A 371 LLAAVGAVAADP--ALLARVEAMRGHVRRAGGAARAAD 406 (415)
T ss_dssp HHHHHHHHHTCH--HHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred HHHHHHHHHcCH--HHHHHHHHHHHHHHhcCHHHHHHH
Confidence 999999999854 334444444444433 33444444
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=91.98 E-value=0.15 Score=51.01 Aligned_cols=40 Identities=10% Similarity=0.067 Sum_probs=35.3
Q ss_pred CCCHH--HHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 737 GVNKG--LVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 737 gvnKG--~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
+..|. .+.+.+++.+ |++++++++|||+.||+.|.+.+|.
T Consensus 170 ~~~KP~~~~~~~~~~~~---g~~~~~~~~vGD~~~Di~~a~~aG~ 211 (229)
T 4dcc_A 170 KMAKPEPEIFKAVTEDA---GIDPKETFFIDDSEINCKVAQELGI 211 (229)
T ss_dssp TCCTTCHHHHHHHHHHH---TCCGGGEEEECSCHHHHHHHHHTTC
T ss_pred CCCCCCHHHHHHHHHHc---CCCHHHeEEECCCHHHHHHHHHcCC
Confidence 44454 8889999998 9999999999999999999999984
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=91.80 E-value=0.045 Score=53.57 Aligned_cols=35 Identities=9% Similarity=0.078 Sum_probs=30.9
Q ss_pred HHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 742 LVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 742 ~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
.+++.+++.+ |++++++++|||+.||+.|.+.+|.
T Consensus 152 ~~~~~~~~~~---~~~~~~~~~vgD~~~Di~~a~~aG~ 186 (206)
T 2b0c_A 152 RIYQHVLQAE---GFSPSDTVFFDDNADNIEGANQLGI 186 (206)
T ss_dssp HHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHTTTC
T ss_pred HHHHHHHHHc---CCCHHHeEEeCCCHHHHHHHHHcCC
Confidence 4566788887 9999999999999999999999984
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=91.58 E-value=0.12 Score=50.22 Aligned_cols=38 Identities=11% Similarity=0.058 Sum_probs=34.0
Q ss_pred CHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 739 NKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 739 nKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
.+...++.+++.+ |++++++++|||+.||+.|.+.+|.
T Consensus 142 p~~~~~~~~~~~~---~~~~~~~~~vgD~~~Di~~a~~aG~ 179 (200)
T 3cnh_A 142 PNPAMYRLGLTLA---QVRPEEAVMVDDRLQNVQAARAVGM 179 (200)
T ss_dssp TCHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHc---CCCHHHeEEeCCCHHHHHHHHHCCC
Confidence 4466888999988 9999999999999999999999984
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=91.51 E-value=0.38 Score=48.86 Aligned_cols=56 Identities=13% Similarity=0.105 Sum_probs=46.1
Q ss_pred HHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCCcccceEeCChhH
Q 044635 742 LVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDTVE 813 (831)
Q Consensus 742 ~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~s~A~y~l~d~~e 813 (831)
......++.+ |++|+++++|||+.+|+.+-+.+|. .+|.|+...+.|+..+++..+
T Consensus 153 ~~~~~a~~~l---g~~p~e~l~VgDs~~di~aA~~aG~-------------~~I~V~~g~~~ad~~~~~~~~ 208 (243)
T 4g9b_A 153 EIFLAACAGL---GVPPQACIGIEDAQAGIDAINASGM-------------RSVGIGAGLTGAQLLLPSTES 208 (243)
T ss_dssp HHHHHHHHHH---TSCGGGEEEEESSHHHHHHHHHHTC-------------EEEEESTTCCSCSEEESSGGG
T ss_pred HHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHcCC-------------EEEEECCCCCcHHHhcCChhh
Confidence 5667778888 9999999999999999999999984 477787777788888876443
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=90.69 E-value=0.13 Score=50.26 Aligned_cols=29 Identities=10% Similarity=0.241 Sum_probs=19.8
Q ss_pred cCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHH
Q 044635 571 TTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSL 605 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L 605 (831)
+++|+|+||+||||++. . .....+++.++
T Consensus 5 ~~~k~viFDlDGTL~d~---~---~~~~~~~~~~~ 33 (206)
T 2b0c_A 5 EAKMLYIFDLGNVIVDI---D---FNRVLGAWSDL 33 (206)
T ss_dssp -CCCEEEECCBTTTEEE---E---THHHHHHHHHH
T ss_pred ccccEEEEcCCCeeecC---c---HHHHHHHHHHh
Confidence 45789999999999983 2 24455555544
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=89.87 E-value=0.14 Score=52.47 Aligned_cols=30 Identities=17% Similarity=0.373 Sum_probs=22.8
Q ss_pred CceeEEecCCCccCCCCCCCC-CCCHHHHHHHHH
Q 044635 572 TTRAILLDYDGTLMPQASIDK-SPNSKTIDILNS 604 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~-~~s~~~~~~L~~ 604 (831)
++|+|+||+||||++ ... .+.+.+.+++++
T Consensus 5 ~ik~i~fDlDGTLld---~~~~~~~~~~~~~l~~ 35 (267)
T 1swv_A 5 KIEAVIFAWAGTTVD---YGCFAPLEVFMEIFHK 35 (267)
T ss_dssp CCCEEEECSBTTTBS---TTCCTTHHHHHHHHHT
T ss_pred CceEEEEecCCCEEe---CCCccHHHHHHHHHHH
Confidence 478999999999999 455 456666666654
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=89.59 E-value=0.12 Score=50.58 Aligned_cols=33 Identities=15% Similarity=0.148 Sum_probs=23.5
Q ss_pred HHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 596 SKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 596 ~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
+.+.+ |+.|.+ . ..++|+|+.+...+...+..+
T Consensus 77 ~~~~~-l~~l~~-~-~~~~i~t~~~~~~~~~~l~~~ 109 (201)
T 2w43_A 77 EDTKY-LKEISE-I-AEVYALSNGSINEVKQHLERN 109 (201)
T ss_dssp GGGGG-HHHHHH-H-SEEEEEESSCHHHHHHHHHHT
T ss_pred CChHH-HHHHHh-C-CeEEEEeCcCHHHHHHHHHHC
Confidence 33445 777755 4 889999999988777776543
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=89.55 E-value=0.3 Score=53.42 Aligned_cols=143 Identities=6% Similarity=-0.012 Sum_probs=73.8
Q ss_pred CCcEEEEeccCcccc-cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCc
Q 044635 337 QGKVMLLGVDDMDIF-KGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYD 415 (831)
Q Consensus 337 ~~~~iil~VdRld~~-KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~ 415 (831)
..+.+++++|++... |+...+..+++.+. +. +++ ++.++.+. +.+.++ . . . .
T Consensus 231 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~-~~-~~~----~v~~~g~~-----~~~~l~----~--------~--~--~ 283 (398)
T 3oti_A 231 ARPEVAITMGTIELQAFGIGAVEPIIAAAG-EV-DAD----FVLALGDL-----DISPLG----T--------L--P--R 283 (398)
T ss_dssp SSCEEEECCTTTHHHHHCGGGHHHHHHHHH-TS-SSE----EEEECTTS-----CCGGGC----S--------C--C--T
T ss_pred CCCEEEEEcCCCccccCcHHHHHHHHHHHH-cC-CCE----EEEEECCc-----Chhhhc----c--------C--C--C
Confidence 346789999999655 35444444444432 22 333 55555332 111110 0 0 1 1
Q ss_pred cEEEecCCCCHHHHHHHHHHcCEeEECCC----ccCCCCCCCCCceEEE----ecccccc--ccc---CCCceeCCC--C
Q 044635 416 PVVLIDEPLKFYERIAYYVVAECCLVTAV----RDGSEPSSPKKSMLVV----SEFIGCS--PSL---SGAIRVNPW--N 480 (831)
Q Consensus 416 pv~~~~~~v~~~el~aly~~ADv~vvtS~----~eGma~~~~~~g~lVl----Se~~G~~--~~l---~~allVnP~--d 480 (831)
.|. +.+.++.. .++..||++|..+- .|.|++ +.|+|+ .+-.+.+ +.+ ..|+.+++. +
T Consensus 284 ~v~-~~~~~~~~---~ll~~ad~~v~~~G~~t~~Eal~~----G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~ 355 (398)
T 3oti_A 284 NVR-AVGWTPLH---TLLRTCTAVVHHGGGGTVMTAIDA----GIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVD 355 (398)
T ss_dssp TEE-EESSCCHH---HHHTTCSEEEECCCHHHHHHHHHH----TCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCC
T ss_pred cEE-EEccCCHH---HHHhhCCEEEECCCHHHHHHHHHh----CCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCC
Confidence 344 44567655 45667999997442 333444 346666 3444555 555 457888775 4
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHH-hhhhccCCHHHHHH
Q 044635 481 IDAVSDAMDSALEMADQEKQLRHEKH-YRYVSTHDVGYWAR 520 (831)
Q Consensus 481 ~~~~A~ai~~aL~m~~~er~~r~~~~-~~~v~~~~~~~W~~ 520 (831)
.++++ ++|+.+ + .++++++. .+......+...++
T Consensus 356 ~~~l~----~ll~~~-~-~~~~~~~~~~~~~~~~~~~~~~~ 390 (398)
T 3oti_A 356 ADLLR----RLIGDE-S-LRTAAREVREEMVALPTPAETVR 390 (398)
T ss_dssp HHHHH----HHHHCH-H-HHHHHHHHHHHHHTSCCHHHHHH
T ss_pred HHHHH----HHHcCH-H-HHHHHHHHHHHHHhCCCHHHHHH
Confidence 55555 677643 3 33334443 44445555555444
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=88.97 E-value=0.074 Score=51.44 Aligned_cols=31 Identities=23% Similarity=0.280 Sum_probs=21.6
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHH
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSL 605 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L 605 (831)
.+|+|+||+||||++ .....++.+.++++++
T Consensus 3 ~~k~i~fDlDGTL~~---~~~~~~~~~~~~~~~~ 33 (207)
T 2go7_A 3 QKTAFIWDLDGTLLD---SYEAILSGIEETFAQF 33 (207)
T ss_dssp -CCEEEECTBTTTEE---CHHHHHHHHHHHHHHH
T ss_pred cccEEEEeCCCcccc---cHHHHHHHHHHHHHHc
Confidence 368999999999998 3444445555666655
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=88.96 E-value=0.39 Score=47.25 Aligned_cols=35 Identities=11% Similarity=0.086 Sum_probs=26.2
Q ss_pred HHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 596 SKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 596 ~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
+.+.++|+.|.+ .|..++|+|+.+...+...+..+
T Consensus 87 pg~~~~l~~L~~-~g~~~~i~tn~~~~~~~~~l~~~ 121 (216)
T 3kbb_A 87 PGVREALEFVKS-KRIKLALATSTPQREALERLRRL 121 (216)
T ss_dssp TTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHT
T ss_pred ccHHHHHHHHHH-cCCCcccccCCcHHHHHHHHHhc
Confidence 455677888866 58999999999888777666543
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.80 E-value=0.22 Score=49.34 Aligned_cols=60 Identities=13% Similarity=0.064 Sum_probs=46.2
Q ss_pred hcCceeEEecCCCccCCCCCCC--------------------CCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhC
Q 044635 570 RTTTRAILLDYDGTLMPQASID--------------------KSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFS 629 (831)
Q Consensus 570 ~s~~rli~~D~DGTLl~~~~~~--------------------~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~ 629 (831)
..+++.+++|+||||+...... -..-|.+.+.|+.|.+ ...++|+|......++..+.
T Consensus 25 ~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~--~~~i~I~Tss~~~~a~~vl~ 102 (195)
T 2hhl_A 25 DYGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQ--LFECVLFTASLAKYADPVAD 102 (195)
T ss_dssp GTTCCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHH--HSEEEEECSSCHHHHHHHHH
T ss_pred cCCCeEEEEccccceEcccccCCCCccceeeeecCCceeeEEEEeCcCHHHHHHHHHc--CCeEEEEcCCCHHHHHHHHH
Confidence 4578999999999999742110 0124788999999987 38999999999998888876
Q ss_pred CC
Q 044635 630 PC 631 (831)
Q Consensus 630 ~~ 631 (831)
.+
T Consensus 103 ~l 104 (195)
T 2hhl_A 103 LL 104 (195)
T ss_dssp HH
T ss_pred Hh
Confidence 54
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=88.67 E-value=0.073 Score=51.26 Aligned_cols=31 Identities=16% Similarity=0.251 Sum_probs=20.5
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHH
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSL 605 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L 605 (831)
++|+|+||+||||++ ......+...++++++
T Consensus 5 ~~k~i~fDlDGTL~d---~~~~~~~~~~~~~~~~ 35 (190)
T 2fi1_A 5 KYHDYIWDLGGTLLD---NYETSTAAFVETLALY 35 (190)
T ss_dssp CCSEEEECTBTTTBC---HHHHHHHHHHHHHHHT
T ss_pred cccEEEEeCCCCcCC---CHHHHHHHHHHHHHHh
Confidence 468999999999998 3333334444555443
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=88.29 E-value=0.1 Score=51.77 Aligned_cols=31 Identities=19% Similarity=0.260 Sum_probs=20.2
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHH
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSL 605 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L 605 (831)
++|+|+||+||||++ ......+...++++++
T Consensus 3 ~ik~i~fDlDGTL~d---~~~~~~~~~~~~~~~~ 33 (229)
T 2fdr_A 3 GFDLIIFDCDGVLVD---SEIIAAQVESRLLTEA 33 (229)
T ss_dssp CCSEEEECSBTTTBC---CHHHHHHHHHHHHHHT
T ss_pred CccEEEEcCCCCcCc---cHHHHHHHHHHHHHHh
Confidence 468999999999998 3332334444444443
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=88.07 E-value=0.27 Score=48.05 Aligned_cols=60 Identities=12% Similarity=0.041 Sum_probs=46.0
Q ss_pred hcCceeEEecCCCccCCCCCCC--------------------CCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhC
Q 044635 570 RTTTRAILLDYDGTLMPQASID--------------------KSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFS 629 (831)
Q Consensus 570 ~s~~rli~~D~DGTLl~~~~~~--------------------~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~ 629 (831)
..+++++++|+|+||+...... -.+-|.+.+.|+++.+ ...++|+|..+...+...+.
T Consensus 12 ~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~--~~~i~I~T~~~~~~a~~vl~ 89 (181)
T 2ght_A 12 DSDKICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGE--LFECVLFTASLAKYADPVAD 89 (181)
T ss_dssp GTTSCEEEECCBTTTEEEESSCCSSCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHH--HSEEEEECSSCHHHHHHHHH
T ss_pred cCCCeEEEECCCCCeECCcccCCCCccceeeeeeCCeeEEEEEEeCCCHHHHHHHHHh--CCCEEEEcCCCHHHHHHHHH
Confidence 3567899999999999742110 0235788899999977 48999999999998888876
Q ss_pred CC
Q 044635 630 PC 631 (831)
Q Consensus 630 ~~ 631 (831)
.+
T Consensus 90 ~l 91 (181)
T 2ght_A 90 LL 91 (181)
T ss_dssp HH
T ss_pred HH
Confidence 54
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=86.93 E-value=0.11 Score=51.72 Aligned_cols=31 Identities=16% Similarity=0.278 Sum_probs=20.6
Q ss_pred cCceeEEecCCCccCCCCCCCCCCCHHHHHHHHH
Q 044635 571 TTTRAILLDYDGTLMPQASIDKSPNSKTIDILNS 604 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~ 604 (831)
.++|+|+||+||||++ ......+...+++++
T Consensus 5 m~~k~i~fDlDGTL~d---~~~~~~~~~~~~~~~ 35 (238)
T 3ed5_A 5 KRYRTLLFDVDDTILD---FQAAEALALRLLFED 35 (238)
T ss_dssp CCCCEEEECCBTTTBC---HHHHHHHHHHHHHHH
T ss_pred ccCCEEEEcCcCcCcC---CchhHHHHHHHHHHH
Confidence 3579999999999998 333333444444444
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=86.89 E-value=0.089 Score=53.21 Aligned_cols=32 Identities=31% Similarity=0.266 Sum_probs=22.0
Q ss_pred cCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHH
Q 044635 571 TTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSL 605 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L 605 (831)
.++|+|+||+||||++ ....+++.+.++++++
T Consensus 20 m~ik~i~fDlDGTL~d---~~~~~~~~~~~~~~~~ 51 (254)
T 3umc_A 20 QGMRAILFDVFGTLVD---WRSSLIEQFQALEREL 51 (254)
T ss_dssp SSCCEEEECCBTTTEE---HHHHHHHHHHHHHHHS
T ss_pred cCCcEEEEeCCCccEe---cCccHHHHHHHHHHHh
Confidence 3579999999999998 3333445555555544
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=86.62 E-value=0.12 Score=52.05 Aligned_cols=32 Identities=22% Similarity=0.239 Sum_probs=21.9
Q ss_pred cCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHH
Q 044635 571 TTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSL 605 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L 605 (831)
.++|+|+||+||||++ ....+.+.+.++++++
T Consensus 13 ~~~k~i~fDlDGTL~d---~~~~~~~~~~~~~~~~ 44 (254)
T 3umg_A 13 RNVRAVLFDTFGTVVD---WRTGIATAVADYAARH 44 (254)
T ss_dssp SBCCEEEECCBTTTBC---HHHHHHHHHHHHHHHT
T ss_pred CCceEEEEeCCCceec---CchHHHHHHHHHHHHh
Confidence 3579999999999998 3333344555555544
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=86.61 E-value=0.11 Score=51.70 Aligned_cols=30 Identities=17% Similarity=0.236 Sum_probs=19.3
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHH
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNS 604 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~ 604 (831)
++|+|+||+||||++ ......+...+++++
T Consensus 1 ~ik~i~fDlDGTL~d---~~~~~~~~~~~~~~~ 30 (233)
T 3nas_A 1 SLKAVIFDLDGVITD---TAEYHFLAWKHIAEQ 30 (233)
T ss_dssp -CCEEEECSBTTTBC---HHHHHHHHHHHHHHH
T ss_pred CCcEEEECCCCCcCC---CHHHHHHHHHHHHHH
Confidence 368999999999998 333333444444443
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=86.44 E-value=0.14 Score=51.28 Aligned_cols=32 Identities=22% Similarity=0.331 Sum_probs=21.4
Q ss_pred cCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHH
Q 044635 571 TTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSL 605 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L 605 (831)
.++|+|+||+||||++ ......+...++++++
T Consensus 21 ~~~k~i~fDlDGTL~d---~~~~~~~~~~~~~~~~ 52 (247)
T 3dv9_A 21 IDLKAVLFDMDGVLFD---SMPNHAESWHKIMKRF 52 (247)
T ss_dssp CCCCEEEEESBTTTBC---CHHHHHHHHHHHHHHT
T ss_pred CCCCEEEECCCCccCc---CHHHHHHHHHHHHHHc
Confidence 3579999999999998 3333334455555543
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=86.24 E-value=2.9 Score=45.87 Aligned_cols=98 Identities=9% Similarity=-0.007 Sum_probs=57.8
Q ss_pred EEEecCCCCHHHHHHHHHHcCEeEECC----CccCCCCCCCCCceEEEecccc----ccccc---CCCceeCCC--CHHH
Q 044635 417 VVLIDEPLKFYERIAYYVVAECCLVTA----VRDGSEPSSPKKSMLVVSEFIG----CSPSL---SGAIRVNPW--NIDA 483 (831)
Q Consensus 417 v~~~~~~v~~~el~aly~~ADv~vvtS----~~eGma~~~~~~g~lVlSe~~G----~~~~l---~~allVnP~--d~~~ 483 (831)
+. +.+.+++. .+|..||++|..+ +.|.+++ +.|+|+.-+.+ .+..+ ..|+.+++. +.++
T Consensus 307 v~-~~~~~~~~---~~l~~~d~~v~~~G~~t~~Ea~~~----G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~ 378 (424)
T 2iya_A 307 VE-VHQWVPQL---DILTKASAFITHAGMGSTMEALSN----AVPMVAVPQIAEQTMNAERIVELGLGRHIPRDQVTAEK 378 (424)
T ss_dssp EE-EESSCCHH---HHHTTCSEEEECCCHHHHHHHHHT----TCCEEECCCSHHHHHHHHHHHHTTSEEECCGGGCCHHH
T ss_pred eE-EecCCCHH---HHHhhCCEEEECCchhHHHHHHHc----CCCEEEecCccchHHHHHHHHHCCCEEEcCcCCCCHHH
Confidence 44 44577765 5788999988743 2333344 45666665532 12222 346777664 8899
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHH
Q 044635 484 VSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQ 524 (831)
Q Consensus 484 ~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 524 (831)
++++|.++|+.+ +.+.++.++.+.+...+...-+.+.+.
T Consensus 379 l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~ 417 (424)
T 2iya_A 379 LREAVLAVASDP--GVAERLAAVRQEIREAGGARAAADILE 417 (424)
T ss_dssp HHHHHHHHHHCH--HHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred HHHHHHHHHcCH--HHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 999999999744 344455555555554444333333333
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=86.12 E-value=3.8 Score=44.85 Aligned_cols=134 Identities=10% Similarity=0.044 Sum_probs=77.7
Q ss_pred CCcEEEEeccCcc-cccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCc
Q 044635 337 QGKVMLLGVDDMD-IFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYD 415 (831)
Q Consensus 337 ~~~~iil~VdRld-~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~ 415 (831)
..+.|+++.|++. ..+.+...++|++++ +++ +|.++.+.... . .+. -.
T Consensus 220 ~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~-----~~~----vv~~~g~~~~~-----~---------------~~~--~~ 268 (404)
T 3h4t_A 220 GSPPVYVGFGSGPAPAEAARVAIEAVRAQ-----GRR----VVLSSGWAGLG-----R---------------IDE--GD 268 (404)
T ss_dssp SSCCEEECCTTSCCCTTHHHHHHHHHHHT-----TCC----EEEECTTTTCC-----C---------------SSC--CT
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHhC-----CCE----EEEEeCCcccc-----c---------------ccC--CC
Confidence 4567889999998 666677777777653 233 34333221000 0 000 11
Q ss_pred cEEEecCCCCHHHHHHHHHHcCEeEECC----CccCCCCCCCCCceEEEeccccccc----cc---CCCceeCC--CCHH
Q 044635 416 PVVLIDEPLKFYERIAYYVVAECCLVTA----VRDGSEPSSPKKSMLVVSEFIGCSP----SL---SGAIRVNP--WNID 482 (831)
Q Consensus 416 pv~~~~~~v~~~el~aly~~ADv~vvtS----~~eGma~~~~~~g~lVlSe~~G~~~----~l---~~allVnP--~d~~ 482 (831)
.+.+ .+.+++.+ ++..||++|..+ +.|.+++ +.|+|+--+.|-.. .+ ..|+.+++ .+.+
T Consensus 269 ~v~~-~~~~~~~~---ll~~~d~~v~~gG~~t~~Eal~~----GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~~~ 340 (404)
T 3h4t_A 269 DCLV-VGEVNHQV---LFGRVAAVVHHGGAGTTTAVTRA----GAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVE 340 (404)
T ss_dssp TEEE-ESSCCHHH---HGGGSSEEEECCCHHHHHHHHHH----TCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHH
T ss_pred CEEE-ecCCCHHH---HHhhCcEEEECCcHHHHHHHHHc----CCCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCCHH
Confidence 3444 45788755 456899999754 3354543 34566554443211 12 34666655 3789
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhhhhcc
Q 044635 483 AVSDAMDSALEMADQEKQLRHEKHYRYVST 512 (831)
Q Consensus 483 ~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 512 (831)
+++++|.++|+ + +.+.++++..+.+..
T Consensus 341 ~l~~ai~~ll~-~--~~~~~~~~~~~~~~~ 367 (404)
T 3h4t_A 341 SLSAALATALT-P--GIRARAAAVAGTIRT 367 (404)
T ss_dssp HHHHHHHHHTS-H--HHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHhC-H--HHHHHHHHHHHHHhh
Confidence 99999999997 3 445566666666655
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=85.96 E-value=4.3 Score=48.39 Aligned_cols=179 Identities=11% Similarity=0.033 Sum_probs=105.1
Q ss_pred HHHhc-cCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccC
Q 044635 331 IKQFH-DQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTF 409 (831)
Q Consensus 331 r~~~~-~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~ 409 (831)
|..+| +.+..++.+.-++. |=-+..+..+.++|++-|+-+ |++...+. ... +.+.+.+++ +
T Consensus 514 R~~~gLp~~~v~f~~fN~~~--Ki~p~~~~~W~~IL~~vP~S~----L~Ll~~~~----~~~----~~l~~~~~~----~ 575 (723)
T 4gyw_A 514 RSQYGLPEDAIVYCNFNQLY--KIDPSTLQMWANILKRVPNSV----LWLLRFPA----VGE----PNIQQYAQN----M 575 (723)
T ss_dssp GGGGTCCTTSEEEECCSCGG--GCCHHHHHHHHHHHHHCSSEE----EEEEETTG----GGH----HHHHHHHHH----T
T ss_pred hhhcCCCCCCEEEEeCCccc--cCCHHHHHHHHHHHHhCCCCe----EEEEeCcH----HHH----HHHHHHHHh----c
Confidence 45566 56677777777764 457889999999999999865 77766432 111 223333332 2
Q ss_pred CCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCC--CCCCCCCceEEEecc----cc--ccccc-----CCCcee
Q 044635 410 GKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGS--EPSSPKKSMLVVSEF----IG--CSPSL-----SGAIRV 476 (831)
Q Consensus 410 g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGm--a~~~~~~g~lVlSe~----~G--~~~~l-----~~allV 476 (831)
|. +-..|+|.. ..+.++..+.|+.+||++-|--+-|- ++++--.|++|++=- +| ++..| .+ +++
T Consensus 576 gi-~~~r~~f~~-~~~~~~~l~~~~~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e-~ia 652 (723)
T 4gyw_A 576 GL-PQNRIIFSP-VAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLE-LIA 652 (723)
T ss_dssp TC-CGGGEEEEE-CCCHHHHHHHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGG-GBC
T ss_pred CC-CcCeEEECC-CCCHHHHHHHhCCCeEEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcc-ccc
Confidence 32 223466554 68999999999999999998877765 222222367777632 21 01111 12 222
Q ss_pred CCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhc---cCCHHHHHHHHHHHHHHHHHHh
Q 044635 477 NPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVS---THDVGYWARSFLQDLERTCREH 533 (831)
Q Consensus 477 nP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~---~~~~~~W~~~~l~~l~~~~~~~ 533 (831)
.|.++-.+.-.++-+. .+.+....+++++... -.|...|++.|-..+..+++..
T Consensus 653 --~~~~~Y~~~a~~la~d-~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r~ 709 (723)
T 4gyw_A 653 --KNRQEYEDIAVKLGTD-LEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEHY 709 (723)
T ss_dssp --SSHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHHH
Confidence 3444443332333333 3333333334444433 2588999998888888887764
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=85.31 E-value=0.15 Score=50.77 Aligned_cols=15 Identities=20% Similarity=0.479 Sum_probs=14.0
Q ss_pred CceeEEecCCCccCC
Q 044635 572 TTRAILLDYDGTLMP 586 (831)
Q Consensus 572 ~~rli~~D~DGTLl~ 586 (831)
++|+|+||+||||++
T Consensus 4 ~~k~i~fDlDGTL~d 18 (240)
T 3qnm_A 4 KYKNLFFDLDDTIWA 18 (240)
T ss_dssp CCSEEEECCBTTTBC
T ss_pred CceEEEEcCCCCCcC
Confidence 578999999999998
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=85.17 E-value=2 Score=47.20 Aligned_cols=133 Identities=8% Similarity=0.024 Sum_probs=75.0
Q ss_pred CcEEEEeccCc-ccccCHHHHHHHHHHHHHhCCCCCCcEEEEEE-ecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCc
Q 044635 338 GKVMLLGVDDM-DIFKGISLKLLAMEQLLIQHPEWQGKVVLVQI-ANPARGRGKDVKEVQAETYSTVERINQTFGKPGYD 415 (831)
Q Consensus 338 ~~~iil~VdRl-d~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqi-g~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~ 415 (831)
...++++.|++ +..|.+...++|++++ + .+ ++.+ |... .+ . ... . .
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~----~-~~----~v~~~g~~~----~~---~------------~~~--~--~ 285 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAH----G-RR----VILSRGWAD----LV---L------------PDD--G--A 285 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHT----T-CC----EEECTTCTT----CC---C------------SSC--G--G
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHC----C-Ce----EEEEeCCCc----cc---c------------cCC--C--C
Confidence 35789999999 6888888888888654 2 22 3333 3111 00 0 000 0 1
Q ss_pred cEEEecCCCCHHHHHHHHHHcCEeEECC----CccCCCCCCCCCceEEEecccc----ccccc---CCCceeCCC--CHH
Q 044635 416 PVVLIDEPLKFYERIAYYVVAECCLVTA----VRDGSEPSSPKKSMLVVSEFIG----CSPSL---SGAIRVNPW--NID 482 (831)
Q Consensus 416 pv~~~~~~v~~~el~aly~~ADv~vvtS----~~eGma~~~~~~g~lVlSe~~G----~~~~l---~~allVnP~--d~~ 482 (831)
.+ .+.+.+++.++ |..||++|..+ +.|.+++ +.|+|+--+.+ .+..+ ..|+.+++. +.+
T Consensus 286 ~v-~~~~~~~~~~~---l~~~d~~v~~~G~~t~~Ea~~~----G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~ 357 (415)
T 1iir_A 286 DC-FAIGEVNHQVL---FGRVAAVIHHGGAGTTHVAARA----GAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFD 357 (415)
T ss_dssp GE-EECSSCCHHHH---GGGSSEEEECCCHHHHHHHHHH----TCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHH
T ss_pred CE-EEeCcCChHHH---HhhCCEEEeCCChhHHHHHHHc----CCCEEECCCCCccHHHHHHHHHCCCcccCCcCCCCHH
Confidence 24 35667887654 69999999753 2233333 44666655433 22223 456777653 789
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhhhhccC
Q 044635 483 AVSDAMDSALEMADQEKQLRHEKHYRYVSTH 513 (831)
Q Consensus 483 ~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~ 513 (831)
+++++|.++ +. + +.++++++..+.+...
T Consensus 358 ~l~~~i~~l-~~-~-~~~~~~~~~~~~~~~~ 385 (415)
T 1iir_A 358 SLSAALATA-LT-P-ETHARATAVAGTIRTD 385 (415)
T ss_dssp HHHHHHHHH-TS-H-HHHHHHHHHHHHSCSC
T ss_pred HHHHHHHHH-cC-H-HHHHHHHHHHHHHhhc
Confidence 999999998 64 3 3344455544444443
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=84.96 E-value=0.44 Score=47.72 Aligned_cols=72 Identities=10% Similarity=0.052 Sum_probs=46.9
Q ss_pred CCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC--C------c-ccceEe
Q 044635 738 VNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK--P------S-KAKYYL 808 (831)
Q Consensus 738 vnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~--~------s-~A~y~l 808 (831)
..|...++.+++ +++++++++|||+.+|+.+++++...+ -..+.|.-|.. + . .|++++
T Consensus 146 ~~K~~~~~~~~~-----~~~~~~~~~vgDs~~d~~di~~A~~aG--------~~~i~v~~g~~~~~~~~l~~~~~~~~~i 212 (231)
T 2p11_A 146 IHKELMLDQVME-----CYPARHYVMVDDKLRILAAMKKAWGAR--------LTTVFPRQGHYAFDPKEISSHPPADVTV 212 (231)
T ss_dssp SSGGGCHHHHHH-----HSCCSEEEEECSCHHHHHHHHHHHGGG--------EEEEEECCSSSSSCHHHHHHSCCCSEEE
T ss_pred CChHHHHHHHHh-----cCCCceEEEEcCccchhhhhHHHHHcC--------CeEEEeCCCCCCCcchhccccCCCceee
Confidence 356555555554 478999999999999777776654421 01234444421 1 1 388999
Q ss_pred CChhHHHHHHHHHH
Q 044635 809 DDTVEIVRLMQGLA 822 (831)
Q Consensus 809 ~d~~eV~~~L~~L~ 822 (831)
++..++.++|+.+.
T Consensus 213 ~~~~el~~~l~~~~ 226 (231)
T 2p11_A 213 ERIGDLVEMDAEWL 226 (231)
T ss_dssp SSGGGGGGCGGGGC
T ss_pred cCHHHHHHHHHHHH
Confidence 99999888776654
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=84.31 E-value=0.54 Score=45.49 Aligned_cols=30 Identities=20% Similarity=0.395 Sum_probs=19.8
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHH
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSL 605 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L 605 (831)
++|+|+||+||||++. .. ......++++++
T Consensus 3 ~~k~viFDlDGTL~d~---~~-~~~~~~~~~~~~ 32 (200)
T 3cnh_A 3 TIKALFWDIGGVLLTN---GW-DREQRADVAQRF 32 (200)
T ss_dssp CCCEEEECCBTTTBCC---SS-CHHHHHHHHHHH
T ss_pred CceEEEEeCCCeeECC---Cc-chHHHHHHHHHc
Confidence 4689999999999983 32 334444455443
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=83.96 E-value=0.21 Score=49.38 Aligned_cols=15 Identities=47% Similarity=0.767 Sum_probs=13.6
Q ss_pred CceeEEecCCCccCC
Q 044635 572 TTRAILLDYDGTLMP 586 (831)
Q Consensus 572 ~~rli~~D~DGTLl~ 586 (831)
+.|+|+||+||||++
T Consensus 3 ~~k~viFDlDGTL~d 17 (210)
T 2ah5_A 3 SITAIFFDLDGTLVD 17 (210)
T ss_dssp TCCEEEECSBTTTEE
T ss_pred CCCEEEEcCCCcCcc
Confidence 368999999999998
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=83.94 E-value=0.17 Score=50.35 Aligned_cols=31 Identities=19% Similarity=0.223 Sum_probs=20.2
Q ss_pred cCceeEEecCCCccCCCCCCCCCCCHHHHHHHHH
Q 044635 571 TTTRAILLDYDGTLMPQASIDKSPNSKTIDILNS 604 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~ 604 (831)
++.|+|+||+||||++ ......+...+++++
T Consensus 4 ~~~k~i~fD~DGTL~d---~~~~~~~~~~~~~~~ 34 (240)
T 3smv_A 4 TDFKALTFDCYGTLID---WETGIVNALQPLAKR 34 (240)
T ss_dssp GGCSEEEECCBTTTBC---HHHHHHHHTHHHHHH
T ss_pred ccceEEEEeCCCcCcC---CchhHHHHHHHHHHH
Confidence 3578999999999998 232233344444444
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=83.62 E-value=0.17 Score=49.57 Aligned_cols=15 Identities=47% Similarity=0.720 Sum_probs=13.7
Q ss_pred CceeEEecCCCccCC
Q 044635 572 TTRAILLDYDGTLMP 586 (831)
Q Consensus 572 ~~rli~~D~DGTLl~ 586 (831)
+.|+|+||+||||++
T Consensus 3 ~~k~iifDlDGTL~d 17 (209)
T 2hdo_A 3 TYQALMFDIDGTLTN 17 (209)
T ss_dssp CCSEEEECSBTTTEE
T ss_pred cccEEEEcCCCCCcC
Confidence 468999999999998
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=83.49 E-value=0.39 Score=52.85 Aligned_cols=38 Identities=16% Similarity=0.190 Sum_probs=32.3
Q ss_pred CCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 593 SPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 593 ~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
++.+++.++++.|.+ .|..|+||||-....++.+...+
T Consensus 221 r~~p~~~eLi~~L~~-~G~~v~IVSgg~~~~v~~ia~~l 258 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEE-NGIDCYIVSASFIDIVRAFATDT 258 (385)
T ss_dssp EECHHHHHHHHHHHH-TTCEEEEEEEEEHHHHHHHHHCT
T ss_pred eeCHHHHHHHHHHHH-CCCeEEEEcCCcHHHHHHHHHHh
Confidence 357899999999977 59999999999999998888764
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=82.99 E-value=1.3 Score=46.28 Aligned_cols=50 Identities=18% Similarity=0.290 Sum_probs=38.1
Q ss_pred CceeEEecCCCccCCCCCC---------CCCCCHHHHHHHHHHhhcCCCeEEEECCCCHh
Q 044635 572 TTRAILLDYDGTLMPQASI---------DKSPNSKTIDILNSLCRDKNNMVFLVSAKSRK 622 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~---------~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~ 622 (831)
..+.+++|.|||+...... ...+-+.+.++|+.|.+ .|..++|+|||+..
T Consensus 158 ~~~~i~iD~dgtl~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~-~g~~~~v~T~k~~~ 216 (301)
T 1ltq_A 158 KPKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYAL-MGYQIVVVSGRESG 216 (301)
T ss_dssp SCEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHHH-TTCEEEEEECSCCC
T ss_pred ccceEEEeCCCCcccccCCCchhhhhccccCCChHHHHHHHHHHH-CCCeEEEEeCCCcc
Confidence 3468889999998773211 11246899999999976 59999999999854
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=82.94 E-value=0.23 Score=49.93 Aligned_cols=31 Identities=19% Similarity=0.357 Sum_probs=21.7
Q ss_pred ceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHh
Q 044635 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLC 606 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~ 606 (831)
.|+|+||+||||++ ......+...++++++.
T Consensus 2 ~k~iiFDlDGTL~d---~~~~~~~~~~~~~~~~~ 32 (241)
T 2hoq_A 2 VKVIFFDLDDTLVD---TSKLAEIARKNAIENMI 32 (241)
T ss_dssp CCEEEECSBTTTBC---HHHHHHHHHHHHHHHHH
T ss_pred ccEEEEcCCCCCCC---ChhhHHHHHHHHHHHHH
Confidence 57999999999998 33333445556666663
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=80.95 E-value=0.29 Score=49.32 Aligned_cols=14 Identities=36% Similarity=0.724 Sum_probs=13.2
Q ss_pred ceeEEecCCCccCC
Q 044635 573 TRAILLDYDGTLMP 586 (831)
Q Consensus 573 ~rli~~D~DGTLl~ 586 (831)
.|+|+||+||||++
T Consensus 4 ~k~viFDlDGTL~d 17 (240)
T 2hi0_A 4 YKAAIFDMDGTILD 17 (240)
T ss_dssp CSEEEECSBTTTEE
T ss_pred ccEEEEecCCCCcc
Confidence 68999999999998
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=80.01 E-value=0.34 Score=49.09 Aligned_cols=16 Identities=44% Similarity=0.555 Sum_probs=14.5
Q ss_pred cCceeEEecCCCccCC
Q 044635 571 TTTRAILLDYDGTLMP 586 (831)
Q Consensus 571 s~~rli~~D~DGTLl~ 586 (831)
++.|+|+||+||||++
T Consensus 21 ~~~k~iiFDlDGTL~d 36 (243)
T 2hsz_A 21 TQFKLIGFDLDGTLVN 36 (243)
T ss_dssp SSCSEEEECSBTTTEE
T ss_pred ccCCEEEEcCCCcCCC
Confidence 4678999999999998
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 831 | ||||
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 1e-112 | |
| d1u02a_ | 229 | c.108.1.15 (A:) Trehalose-6-phosphate phosphatase | 1e-30 | |
| d1s2oa1 | 244 | c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 { | 7e-10 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 4e-09 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 6e-09 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 1e-08 | |
| d1xvia_ | 232 | c.108.1.10 (A:) Putative mannosyl-3-phosphoglycera | 6e-08 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 9e-08 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 2e-07 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 4e-07 | |
| d2amya1 | 243 | c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human ( | 2e-06 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 4e-06 | |
| d1wzca1 | 243 | c.108.1.10 (A:1-243) Putative mannosyl-3-phosphogl | 1e-05 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 4e-05 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 347 bits (891), Expect = e-112
Identities = 129/479 (26%), Positives = 234/479 (48%), Gaps = 37/479 (7%)
Query: 61 RIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVN 120
R+++V+N++ + + ++ G L + + L ++ G E N
Sbjct: 2 RLVVVSNRIAPPDEHAA-SAGG---------LAVGILGAL--KAAGGLWFGWSGETG--N 47
Query: 121 EQDEVSQILLDTFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLW 180
E + ++ L YY+ F LWP FHY L L +F R W
Sbjct: 48 EDQPLKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLV-----QFQRPAW 102
Query: 181 QAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240
Y+ VN + AD+++ ++ DD +W+HDYHL+ LRKR ++GFFLH PFP+ E
Sbjct: 103 DGYLRVNALLADKLLPLLQD-DDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPE 161
Query: 241 IYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTV 300
I+ LP + +L L + DL+GF T + FL C S + +T S + + +G+
Sbjct: 162 IFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHT---AWGKAF 218
Query: 301 SIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLA 360
++ P+GI ++ + P K+++L + + + V+ +D KG+ + LA
Sbjct: 219 RTEVYPIGIEPKEIAKQAAGP-LPPKLAQL--KAELKNVQNIFSVERLDYSKGLPERFLA 275
Query: 361 MEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLI 420
E LL ++P+ GK+ QIA +RG + ++++ + + RIN +G+ G+ P+ +
Sbjct: 276 YEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYL 335
Query: 421 DEPLKFYERIAYYVVAECCLVTAVRDGSEPSSPKKSM----------LVVSEFIGCSPSL 470
++ + + ++ LVT +RDG K+ + LV+S+F G + L
Sbjct: 336 NQHFDRKLLMKIFRYSDVGLVTPLRDGM-NLVAKEYVAAQDPANPGVLVLSQFAGAANEL 394
Query: 471 SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLERT 529
+ A+ VNP++ D V+ A+D AL M+ E+ RH + + +D+ +W F+ DL++
Sbjct: 395 TSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQI 453
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 229 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 118 bits (295), Expect = 1e-30
Identities = 44/254 (17%), Positives = 94/254 (37%), Gaps = 31/254 (12%)
Query: 576 ILLDYDGTLMPQASI--DKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCEN 633
I LDYDGTL+P + ++ + +++ L + ++V+ +S + ++ +
Sbjct: 3 IFLDYDGTLVPIIMNPEESYADAGLLSLISDLK--ERFDTYIVTGRSPEEISRFLPLDI- 59
Query: 634 LGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWS 693
+ HG + + G + + G I K A+++
Sbjct: 60 -NMICYHGACSK-INGQIVYNNGSDRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLYH 117
Query: 694 YEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQE 753
D +L +E + V G+ ++E++ GVNKG + +
Sbjct: 118 LGLMGAD----MKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKGSAIRSVRG---- 169
Query: 754 REMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDTVE 813
+ GDD +DE FE + VG + AK+++ D +E
Sbjct: 170 ----ERPAIIAGDDATDEAAFEANDDA------------LTIKVGEGETHAKFHVADYIE 213
Query: 814 IVRLMQGLACVADQ 827
+ ++++ + + Q
Sbjct: 214 MRKILKFIEMLGVQ 227
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Score = 58.1 bits (139), Expect = 7e-10
Identities = 33/220 (15%), Positives = 65/220 (29%), Gaps = 25/220 (11%)
Query: 574 RAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSR-----KTLAEWF 628
++ D D T + + + ++ L D+ +L A R + L +
Sbjct: 4 LLLISDLDNTWV--------GDQQALEHLQEYLGDRRGNFYLAYATGRSYHSARELQKQV 55
Query: 629 SPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKET 688
E G + +++ + I + + + S +E
Sbjct: 56 GLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGFEALKPQSPLEQNPW 115
Query: 689 ALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLL 748
+ + + Q E+L + S V++ PQ NKG +
Sbjct: 116 KISYHLDPQACPTVIDQLTEMLKETG----IPVQVIFSSGKDVDLLPQRSNKGNATQY-- 169
Query: 749 STMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAP 788
Q M P L GD +D +FE + +
Sbjct: 170 -LQQHLAMEPSQTLVCGDSGNDIGLFE-----TSARGVIV 203
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 56.1 bits (134), Expect = 4e-09
Identities = 42/246 (17%), Positives = 74/246 (30%), Gaps = 43/246 (17%)
Query: 574 RAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKS----RKTLAEWFS 629
+ I +D DGTL+ D + + + + + R + V L + + L E
Sbjct: 5 KLIAIDMDGTLLLP---DHTISPAVKNAIAAA-RARGVNVVLTTGRPYAGVHNYLKELHM 60
Query: 630 PCENLGIAAEHG------------YFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTET 677
+G L D+ + G A LYT
Sbjct: 61 EQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTAN 120
Query: 678 TDGSTIE------DKETALVWSYEDADPDF---------GSCQAKELLDHLESVLANEPV 722
D S + E DP+ + + + + +
Sbjct: 121 RDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKYT 180
Query: 723 TVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMA 782
+KS +E+ + VNKG K + P+ ++ +GD +D M E A
Sbjct: 181 VLKSAPYFLEILDKRVNKGTGVKS---LADVLGIKPEEIMAIGDQENDIAMIE-----YA 232
Query: 783 GPSIAP 788
G +A
Sbjct: 233 GVGVAV 238
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 55.0 bits (131), Expect = 6e-09
Identities = 33/215 (15%), Positives = 71/215 (33%), Gaps = 26/215 (12%)
Query: 574 RAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCEN 633
R +D DG L + D+ ++K I+ + S K V L+S ++
Sbjct: 4 RLAAIDVDGNLTDR---DRLISTKAIESIRSA-EKKGLTVSLLSGNVI---PVVYALKIF 56
Query: 634 LGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWS 693
LGI +G F ++ + + ++ ++ T +I +
Sbjct: 57 LGI---NGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTSMRSI--------LT 105
Query: 694 YEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQE 753
+ G E +D++ + + + +G +K + +
Sbjct: 106 NRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNK---LKEM 162
Query: 754 REMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAP 788
+ D +L +GD +D MF+ + P
Sbjct: 163 YSLEYDEILVIGDSNNDMPMFQ-----LPVRKACP 192
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 54.3 bits (129), Expect = 1e-08
Identities = 38/216 (17%), Positives = 73/216 (33%), Gaps = 26/216 (12%)
Query: 574 RAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCE- 632
+AI +D DGT+ ++ + K ++ + + LV+ + +
Sbjct: 3 KAISIDIDGTITYP---NRMIHEKALEAIRRA-ESLGIPIMLVTGNTVQFAEAASILIGT 58
Query: 633 NLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVW 692
+ + AE G ++ + + W +I K + T+ D+ LV
Sbjct: 59 SGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIR----KRFPNARTSYTMPDRRAGLVI 114
Query: 693 SYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQ 752
E + + EL N + + VK +NKG + +
Sbjct: 115 MRETINVETVREIINEL---------NLNLVAVDSGFAIHVKKPWINKG---SGIEKASE 162
Query: 753 EREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAP 788
+ P V VGD +D D F+ + G +A
Sbjct: 163 FLGIKPKEVAHVGDGENDLDAFK-----VVGYKVAV 193
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Score = 52.0 bits (123), Expect = 6e-08
Identities = 32/230 (13%), Positives = 59/230 (25%), Gaps = 27/230 (11%)
Query: 576 ILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRK---------TLAE 626
+ D DGTL+ L L R+ N V L S+K+ L
Sbjct: 7 VFSDLDGTLLDS---HSYDWQPAAPWLTRL-REANVPVILCSSKTSAEMLYLQKTLGLQG 62
Query: 627 WFSPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDK 686
EN + + + + I + + + TT +
Sbjct: 63 LPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLVLNTLREKEHFKFTTFDDVDDAT 122
Query: 687 ETALVWSYEDADPD---------FGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQG 737
+ E + + L + G V
Sbjct: 123 IAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWHVLDAS 182
Query: 738 VNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIA 787
K A +++T Q+ L +GD +D + E + ++
Sbjct: 183 AGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLE-----VMDYAVI 227
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 52.3 bits (124), Expect = 9e-08
Identities = 36/240 (15%), Positives = 72/240 (30%), Gaps = 36/240 (15%)
Query: 574 RAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCEN 633
+ I+ D DGT + A P + L + + + S L +F ++
Sbjct: 3 KVIVTDMDGTFLNDAKTYNQPR--FMAQYQEL-KKRGIKFVVASGNQYYQLISFFPELKD 59
Query: 634 LGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAE----PVMKLYTETTDGSTIEDK--- 686
++ I E + + + +
Sbjct: 60 EISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPE 119
Query: 687 -----------ETALVWSYEDADP-------DFGSCQAKELLDHLESVLANEPVTVKSGQ 728
V Y++ D + Q ++D L L V SG
Sbjct: 120 AFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTSGF 179
Query: 729 NLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAP 788
+++ G++K A + ++ ++ P V+ +GD +D +M + MA S A
Sbjct: 180 GFIDLIIPGLHK---ANGISRLLKRWDLSPQNVVAIGDSGNDAEMLK-----MARYSFAM 231
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 51.1 bits (121), Expect = 2e-07
Identities = 33/238 (13%), Positives = 72/238 (30%), Gaps = 33/238 (13%)
Query: 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSR---KTLAEWFS 629
T+A+ D DGTL+ S TI+ L + K +F+ + + + L+E
Sbjct: 1 TKALFFDIDGTLVS--FETHRIPSSTIEALEAA-HAKGLKIFIATGRPKAIINNLSELQD 57
Query: 630 PCENLGIAAEHGYFFRLRRDEEWETCIPVADC-----------------GWKQIAEPVMK 672
G +G + + + +++ IP + I+
Sbjct: 58 RNLIDGYITMNGAYCFVGEEVIYKSAIPQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPN 117
Query: 673 LYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLAN--EPVTVKSGQNL 730
+ + V E ++ + + + VL + +
Sbjct: 118 EMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFITEEEEKEVLPSIPTCEIGRWYPAF 177
Query: 731 VEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAP 788
+V +G K + ++ + + + GD +D M A +A
Sbjct: 178 ADVTAKGDTKQKGIDEI---IRHFGIKLEETMSFGDGGNDISMLR-----HAAIGVAM 227
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 50.0 bits (118), Expect = 4e-07
Identities = 37/256 (14%), Positives = 70/256 (27%), Gaps = 45/256 (17%)
Query: 567 AYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAE 626
A K + +L+D+DGTL D S+ ID + +K MV + + +S+ +
Sbjct: 4 ALKGADIKLLLIDFDGTLFVDK--DIKVPSENIDAIKEA-IEKGYMVSICTGRSKVGILS 60
Query: 627 WFSPCENLGIAAEHGYF---------------------------FRLRRDEEWETCIPVA 659
F + + E
Sbjct: 61 AFGEENLKKMNFYGMPGVYINGTIVYDQIGYTLLDETIETDVYAELISYLVEKNLVNQTI 120
Query: 660 DCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSC-------QAKELLDH 712
+ Y + E++ + + ++K ++ +
Sbjct: 121 FHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEMLKYRTMNKLMIVLDPSESKTVIGN 180
Query: 713 LESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDED 772
L+ N+ + EV G +K ++ + D VL VGD +D
Sbjct: 181 LKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINY---LLKHYNISNDQVLVVGDAENDIA 237
Query: 773 MFEVIISSMAGPSIAP 788
M S A
Sbjct: 238 MLS-----NFKYSFAV 248
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.7 bits (112), Expect = 2e-06
Identities = 33/227 (14%), Positives = 60/227 (26%), Gaps = 36/227 (15%)
Query: 574 RAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSP--- 630
L D DGTL + + D L L + + +V + + E
Sbjct: 4 ALCLFDVDGTLTAP---RQKITKEMDDFLQKLR--QKIKIGVVGGSDFEKVQEQLGNDVV 58
Query: 631 ------CENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIE 684
G+ A R++ + + + K+ G+ IE
Sbjct: 59 EKYDYVFPENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIE 118
Query: 685 DKETALVWSYEDADPDFGSCQAK-----------ELLDHLESVLANEPVTVK-SGQNLVE 732
+ L S + + L A + +T GQ +
Sbjct: 119 FRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQISFD 178
Query: 733 VKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRS----DEDMFE 775
V P G +K + + + GD D ++F
Sbjct: 179 VFPDGWDKRYCLRHVE------NDGYKTIYFFGDKTMPGGNDHEIFT 219
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 47.2 bits (111), Expect = 4e-06
Identities = 35/265 (13%), Positives = 73/265 (27%), Gaps = 62/265 (23%)
Query: 574 RAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCEN 633
+ I +D DGTL+ + + + L + V + + ++ + F P
Sbjct: 2 KLIAIDLDGTLLNS---KHQVSLENENALRQA-QRDGIEVVVSTGRAHFDVMSIFEPLGI 57
Query: 634 LGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMK------------LYTETTDGS 681
+ + I + +YT
Sbjct: 58 KTWVISANGAVIHDPEGRLYHHETIDKKRAYDILSWLESENYYYEVFTGSAIYTPQNGRE 117
Query: 682 TIE---------DKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVT--------- 723
++ + E L + A+ + + E A+EP+
Sbjct: 118 LLDVELDRFRSANPEADLSVLKQAAEVQYSQSGFAYINSFQELFEADEPIDFYNILGFSF 177
Query: 724 --------------------VKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLC 763
V S ++ E+ + +KG + L ++ + +
Sbjct: 178 FKEKLEAGWKRYEHAEDLTLVSSAEHNFELSSRKASKG---QALKRLAKQLNIPLEETAA 234
Query: 764 VGDDRSDEDMFEVIISSMAGPSIAP 788
VGD +D+ M E AG +A
Sbjct: 235 VGDSLNDKSMLE-----AAGKGVAM 254
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 45.0 bits (105), Expect = 1e-05
Identities = 43/261 (16%), Positives = 74/261 (28%), Gaps = 38/261 (14%)
Query: 574 RAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWF----- 628
R I LD D TL+P D I+ L +D + S+K+R +
Sbjct: 3 RLIFLDIDKTLIPGYEPDP-----AKPIIEEL-KDMGFEIIFNSSKTRAEQEYYRKELEV 56
Query: 629 ----SPCENLGIAAEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTDGSTIE 684
I GYF + +E I + + +K
Sbjct: 57 ETPFISENGSAIFIPKGYFPFDVKGKEVGNYIVIELGIRVEKIREELKKLENIYGLKYYG 116
Query: 685 DKETALVWSYEDADPDFGSCQAKELLD---------HLESVLANEPVTVKSGQNLVEVKP 735
+ + + P+ + E VL V +
Sbjct: 117 NSTKEEIEKFTGMPPELVPLAMEREYSETIFEWSRDGWEEVLVEGGFKVTM-GSRFYTVH 175
Query: 736 QGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFAC 795
+KG AK LL + + VGD +D MFE + +
Sbjct: 176 GNSDKGKAAKILL--DFYKRLGQIESYAVGDSYNDFPMFE-----VVDKVFIVGSLKH-- 226
Query: 796 TVGRKPSKAKYYLDDTVEIVR 816
K ++ + D +E+++
Sbjct: 227 ----KKAQNVSSIIDVLEVIK 243
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 43.8 bits (102), Expect = 4e-05
Identities = 41/242 (16%), Positives = 75/242 (30%), Gaps = 40/242 (16%)
Query: 574 RAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKS-------RKTLAE 626
R + D DGTL+ + + K + L + V S + K +
Sbjct: 3 RVFVFDLDGTLLND---NLEISEKDRRNIEKL--SRKCYVVFASGRMLVSTLNVEKKYFK 57
Query: 627 WFSPCENLGIAA----EHGYFFRLRRDEEWETCIP--VADCGWKQIAEPVMKLYTETTD- 679
P A E G + E I + A LY+E +
Sbjct: 58 RTFPTIAYNGAIVYLPEEGVILNEKIPPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNE 117
Query: 680 ----GSTIEDKETALVWSYEDADPDFGSC---------QAKELLDHLESVLANEPVTVKS 726
+ + + + + + G+ + EL + L + KS
Sbjct: 118 EIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVFKS 177
Query: 727 GQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSI 786
+E+ P+ V+KG + + + ++ GD+ +D MFE AG +
Sbjct: 178 FPTYLEIVPKNVDKGKALRF---LRERMNWKKEEIVVFGDNENDLFMFE-----EAGLRV 229
Query: 787 AP 788
A
Sbjct: 230 AM 231
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 831 | |||
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 100.0 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 99.97 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.95 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.94 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.93 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.93 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.92 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.92 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.91 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.9 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 99.88 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.87 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.86 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 99.84 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.82 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 99.8 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 99.78 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.72 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 99.61 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.37 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.29 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.94 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.93 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.55 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 98.5 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 98.49 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 98.46 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.26 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.89 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.86 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 97.78 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.76 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 97.74 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 97.7 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 97.5 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 97.4 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 97.35 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 97.29 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 97.13 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 97.07 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 97.01 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 94.95 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 94.79 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 93.96 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 93.27 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 92.68 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 92.62 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 92.53 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 92.28 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 92.25 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 91.93 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 91.61 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 90.85 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 90.43 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 89.1 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 88.16 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 88.05 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 87.04 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 86.96 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 83.88 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3.6e-95 Score=830.30 Aligned_cols=444 Identities=28% Similarity=0.555 Sum_probs=406.9
Q ss_pred CcEEEEEcCCccceeecCCCCCCeEEeeCCCchHHHhhhccCCCCCCeEEEeccCCcCCcchhhhHhHhhccCeeEEEEe
Q 044635 60 DRIIIVANQLPIRAQRKSDNSKGWIFSWDENSLLLQLKDGLGDDDIEVIYVGCLKEEIHVNEQDEVSQILLDTFKCVPTF 139 (831)
Q Consensus 60 ~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~wvG~~~~~~~~~~~~~~~~~~~~~~~~~pv~ 139 (831)
+||||||||+|+...+.. ++|||+++|.+.+.. .+++||||+|...++. +.+......+|+|+||+
T Consensus 1 srlivvsnr~~~~~~~~~----------~~gGl~~al~~~~~~--~~g~Wvgw~g~~~~~~--~~~~~~~~~~~~~~~v~ 66 (456)
T d1uqta_ 1 SRLVVVSNRIAPPDEHAA----------SAGGLAVGILGALKA--AGGLWFGWSGETGNED--QPLKKVKKGNITWASFN 66 (456)
T ss_dssp CCEEEEEEECCCCC--------------CCCHHHHHHHHHHHH--HCEEEEEEEEEESCCS--SCCEEEEETTEEEEEEE
T ss_pred CCEEEEECCCCCCCCCCC----------CCccHHHHhHHHHhh--CCCEEEecCCCCCccc--chhhhhhccCceeEEec
Confidence 589999999999765433 467899999887664 6999999998765432 22333446789999999
Q ss_pred CChHhhhhHhhhhhccccccccccCCCCCCCCCCccChhhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHH
Q 044635 140 LPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFL 219 (831)
Q Consensus 140 l~~~~~~~~y~gf~~~~lWp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~l 219 (831)
|+++++++||+||||++|||+|||+++. .+|++++|++|++||++||++|++.+++ +|+||||||||+++|.+|
T Consensus 67 l~~~~~~~~Y~gf~n~~LWpl~H~~~~~-----~~~~~~~~~~Y~~vN~~fA~~l~~~~~~-~d~iwvhDyhl~llp~~l 140 (456)
T d1uqta_ 67 LSEQDLDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWDGYLRVNALLADKLLPLLQD-DDIIWIHDYHLLPFAHEL 140 (456)
T ss_dssp ECHHHHHHHTTTHHHHTHHHHHTTCGGG-----CCCCHHHHHHHHHHHHHHHHHHGGGCCT-TCEEEEESGGGTTHHHHH
T ss_pred CCHHHHHHHHHHhhhccccccccCcccc-----ccccHHHHHHHHHHHHHHHHHHHHhccC-CCeEEEeccchhhhHHHH
Confidence 9999999999999999999999999876 4899999999999999999999999987 599999999999999999
Q ss_pred HhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEE
Q 044635 220 RKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRT 299 (831)
Q Consensus 220 r~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~ 299 (831)
|++.|+++||||+|+|||++++|+++|++++|+++||++|+|||||++|++||+.+|.++++....... .+.+.|+.
T Consensus 141 R~~~~~~~i~~flH~pfP~~~~fr~lp~~~~il~~ll~~d~igf~~~~~~~~fl~~~~~ll~~~~~~~~---~i~~~gr~ 217 (456)
T d1uqta_ 141 RKRGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAK---SHTAWGKA 217 (456)
T ss_dssp HHTTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTT---EEEETTEE
T ss_pred HHhCCCCcEEEEeCCCCCChHHhccCcchHHHHHHhhccccccccCHHHHHHHHHHHHHHhCcccccCC---eEEecCce
Confidence 999999999999999999999999999999999999999999999999999999999999998765544 57889999
Q ss_pred EEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 044635 300 VSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQ 379 (831)
Q Consensus 300 ~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvq 379 (831)
+++.++|+|||+..|......+ ..+.+.++++++ .++++|++|||+|+.||+..+|+||++||++||+++++++|+|
T Consensus 218 v~v~~~p~GID~~~~~~~~~~~-~~~~~~~l~~~~--~~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~ 294 (456)
T d1uqta_ 218 FRTEVYPIGIEPKEIAKQAAGP-LPPKLAQLKAEL--KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQ 294 (456)
T ss_dssp EEEEECCCCCCHHHHHHHHHSC-CCHHHHHHHHHT--TTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEE
T ss_pred eeeeeecCcccchhhhhhcccH-HHHHHHHHHHhc--CCCeEEEEeCCCchhhchHHHHHHHHHHHHhCccccccEEEEE
Confidence 9999999999999998766554 345677888888 8999999999999999999999999999999999999999999
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCC--------CCC
Q 044635 380 IANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGS--------EPS 451 (831)
Q Consensus 380 ig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGm--------a~~ 451 (831)
++.|++++.++|.+++.++.++|++||++|+..+|+|++++.+.++++++.++|+.||||++||++||| +|.
T Consensus 295 ~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~ 374 (456)
T d1uqta_ 295 IAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQ 374 (456)
T ss_dssp ECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHS
T ss_pred EcCCcccchHHHHHHHHHHHHHHHHHHhhhccCCCCceeeccCCcCHHHHhHHHhhhceeecCCccCCCCcHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 333
Q ss_pred -CCCCceEEEecccccccccCCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHHHHHHH
Q 044635 452 -SPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQDLERT 529 (831)
Q Consensus 452 -~~~~g~lVlSe~~G~~~~l~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 529 (831)
...+|++|+|+++|+++++.+|++|||||++++|+||.+||+||++||++|+++++++|.+||+.+|+++||.+|++.
T Consensus 375 ~p~~~g~lIlS~~~G~~~~l~~g~lVnP~d~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~~~~~~~W~~~fl~~l~~~ 453 (456)
T d1uqta_ 375 DPANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQI 453 (456)
T ss_dssp CTTSCCEEEEETTBGGGGTCTTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred CCCCCCcEEEeCCCCCHHHhCCeEEECcCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhh
Confidence 245789999999999999999999999999999999999999999999999999999999999999999999999874
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.97 E-value=3.3e-31 Score=270.46 Aligned_cols=223 Identities=19% Similarity=0.300 Sum_probs=182.2
Q ss_pred eEEecCCCccCCCCC--CCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCceE
Q 044635 575 AILLDYDGTLMPQAS--IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEW 652 (831)
Q Consensus 575 li~~D~DGTLl~~~~--~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~w 652 (831)
|||||+||||++... ..+.++++++++|++|++ ++.|+|+|||+...+...+. +..+++++||+.+..++...+
T Consensus 2 Li~~DlDGTL~~~~~~~~~~~i~~~~~~~l~~l~~--~~~v~i~TGR~~~~l~~~~~--~~~~~~~~ng~~~~~~~~~~~ 77 (229)
T d1u02a_ 2 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKE--RFDTYIVTGRSPEEISRFLP--LDINMICYHGACSKINGQIVY 77 (229)
T ss_dssp EEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHH--HSEEEEECSSCHHHHHHHSC--SSCEEEEGGGTEEEETTEEEE
T ss_pred EEEEEecCCCCCCCCChhhCCCCHHHHHHHHHHhh--CCCEEEEcCCCHHHhhhhcC--ccccEEecCeEEEecCCceee
Confidence 899999999997432 345789999999999975 67899999999999988775 356899999999988754333
Q ss_pred EEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCeEEE
Q 044635 653 ETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVE 732 (831)
Q Consensus 653 ~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vE 732 (831)
.........|.+.+.+.+..+....++...+.+.....+++....+.. ..+..+.++..+....+.+.++..++|
T Consensus 78 -~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~id 152 (229)
T d1u02a_ 78 -NNGSDRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLYHLGLMGADM----KPKLRSRIEEIARIFGVETYYGKMIIE 152 (229)
T ss_dssp -CTTGGGGHHHHHHHHHHHTTHHHHSTTCEEEEETTEEEEECTTSCSTT----HHHHHHHHHHHHHHHTCEEEECSSEEE
T ss_pred -ecchhhhHHHHHHHHHHhHHhhcccCCceecccccceeeeehhhhhhh----HHHHHHHHHHHhhcCCeEEEeeceEEE
Confidence 233333445666777777777778899999999999999988765543 344555566666666778899999999
Q ss_pred EEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCCcccceEeCChh
Q 044635 733 VKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDTV 812 (831)
Q Consensus 733 V~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~s~A~y~l~d~~ 812 (831)
|+|+|+|||.|+++|+++ ++++|||||.||++||++++++ |+|+||+++++|+|++++++
T Consensus 153 i~p~g~~Kg~al~~l~~~--------~~~i~~GDs~ND~~Mf~~~~~~------------~av~~g~~~~~A~~~~~~~~ 212 (229)
T d1u02a_ 153 LRVPGVNKGSAIRSVRGE--------RPAIIAGDDATDEAAFEANDDA------------LTIKVGEGETHAKFHVADYI 212 (229)
T ss_dssp EECTTCCHHHHHHHHHTT--------SCEEEEESSHHHHHHHHTTTTS------------EEEEESSSCCCCSEEESSHH
T ss_pred EecCCCCHHHHHHHHhcc--------ccceeecCCCChHHHHhccCCe------------EEEEeCCCCccCeEEcCCHH
Confidence 999999999999999753 6799999999999999999865 89999999999999999999
Q ss_pred HHHHHHHHHHhhhc
Q 044635 813 EIVRLMQGLACVAD 826 (831)
Q Consensus 813 eV~~~L~~L~~~~~ 826 (831)
||.++|+.|.....
T Consensus 213 ev~~~l~~l~~~~~ 226 (229)
T d1u02a_ 213 EMRKILKFIEMLGV 226 (229)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999998876544
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.95 E-value=1.4e-26 Score=243.07 Aligned_cols=225 Identities=18% Similarity=0.289 Sum_probs=164.5
Q ss_pred ceeEEecCCCccCCCCCCCCCC-CHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC-CCceEEecCCEEEEeCCCc
Q 044635 573 TRAILLDYDGTLMPQASIDKSP-NSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC-ENLGIAAEHGYFFRLRRDE 650 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~-s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~-~~~~liaenGa~i~~~~~~ 650 (831)
+|+|++|+||||++ ..+.+ +++++++|++|++. |+.|+++|||+...+.++++.+ ...++|++||+.|..++..
T Consensus 2 IKli~~DlDGTLl~---~~~~~~~~~~~~~l~~l~~~-gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~ 77 (269)
T d1rlma_ 2 VKVIVTDMDGTFLN---DAKTYNQPRFMAQYQELKKR-GIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQ 77 (269)
T ss_dssp CCEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHHH-TCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEE
T ss_pred EEEEEEeCCccCcC---CCCcCChHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHhCcccceEeeceeEEEECCcE
Confidence 68999999999998 45554 47899999999884 9999999999999999999887 4569999999999987544
Q ss_pred eEEEcCCcCCccHHHHHHHHHHHHhccC---------CCeeEeeccc--------------eEEEeeccCCCc-------
Q 044635 651 EWETCIPVADCGWKQIAEPVMKLYTETT---------DGSTIEDKET--------------ALVWSYEDADPD------- 700 (831)
Q Consensus 651 ~w~~~~~~~~~~w~~~v~~il~~~~e~~---------~gs~ie~k~~--------------~l~~~~~~~d~~------- 700 (831)
.+..... ......++..+.+.. ++.++..... .....+...+..
T Consensus 78 ~~~~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (269)
T d1rlma_ 78 LFHGELT------RHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLN 151 (269)
T ss_dssp EEECCCC------HHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEEE
T ss_pred EEEeccc------hHHHHHHHHHHHhhcCceEEEEecCceEEecCCcHHHHHHHHhhcccccccccHhhhcchheEEEec
Confidence 4332221 222333333333211 2222221100 000011111111
Q ss_pred cchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchh
Q 044635 701 FGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISS 780 (831)
Q Consensus 701 ~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~ 780 (831)
....+..++.+++...+......+.++..++||+|+++|||.|+++|++++ |++++++++||||.||++||+.++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~p~~~sK~~al~~l~~~l---gi~~~~vi~~GD~~ND~~Ml~~ag-- 226 (269)
T d1rlma_ 152 LPDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRW---DLSPQNVVAIGDSGNDAEMLKMAR-- 226 (269)
T ss_dssp CCGGGHHHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHCS--
T ss_pred CCHHHHHHHHHHHHHHhhcceEEEEEcCceEEEecCchHHHHHHHHHhhhh---ccccccEEEEcCCcchHHHHHhCC--
Confidence 123356677777777666655667789999999999999999999999999 999999999999999999999998
Q ss_pred cCCCCCCCCCceEEEEeCCC----CcccceEeC--ChhHHHHHHHHHHhh
Q 044635 781 MAGPSIAPRAEVFACTVGRK----PSKAKYYLD--DTVEIVRLMQGLACV 824 (831)
Q Consensus 781 ~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~--d~~eV~~~L~~L~~~ 824 (831)
++|+|||+ +..|+|++. +.++|+++|++|.+-
T Consensus 227 ------------~~vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~~~l~~ 264 (269)
T d1rlma_ 227 ------------YSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDN 264 (269)
T ss_dssp ------------EEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHHHHT
T ss_pred ------------eEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHHHhc
Confidence 57888886 578999986 467899999998764
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.94 E-value=2.6e-26 Score=241.39 Aligned_cols=222 Identities=16% Similarity=0.165 Sum_probs=162.1
Q ss_pred ceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC--CCceEEecCCEEEEeCCCc
Q 044635 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC--ENLGIAAEHGYFFRLRRDE 650 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~--~~~~liaenGa~i~~~~~~ 650 (831)
+|+|++|+||||++ .++.++++++++|++|++ ++.++++|||++..+.+.+..+ ...++|++||+.|+.+++.
T Consensus 2 ~Kli~~DlDGTL~~---~~~~i~~~~~~al~~l~~--~~~~~i~TGR~~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~ 76 (267)
T d1nf2a_ 2 YRVFVFDLDGTLLN---DNLEISEKDRRNIEKLSR--KCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEG 76 (267)
T ss_dssp BCEEEEECCCCCSC---TTSCCCHHHHHHHHHHTT--TSEEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTTE
T ss_pred eEEEEEeCCccccC---CcCccCHHHHHHHHHHHc--CCEEEEECCCChHHHHHHHHHhcccCCceeccCCeEEEecccc
Confidence 68999999999998 678899999999999975 6689999999999888877653 3557999999999998665
Q ss_pred eEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEe---------------eccCCCcc--------------
Q 044635 651 EWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWS---------------YEDADPDF-------------- 701 (831)
Q Consensus 651 ~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~---------------~~~~d~~~-------------- 701 (831)
...... .+. +.+..+++...+......+...+...... ++. .+.+
T Consensus 77 ~i~~~~--i~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~ 150 (267)
T d1nf2a_ 77 VILNEK--IPP---EVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRV-EPNLSELVSKMGTTKLLL 150 (267)
T ss_dssp EEEECC--BCH---HHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEE-CTTHHHHHHHHCBSEEEE
T ss_pred cccccC--CCH---HHHHHHHHHHHhcCceEEEeeCceEEecCCcHHHHHHHHhcCCCcee-cCcHHHHhhhccceEEEE
Confidence 543321 222 33445555443321111111111100000 000 0000
Q ss_pred --chHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 702 --GSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 702 --~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
...+.+++.+.+.+.+.+....+.++..++||+|+++|||.|+++|++++ |++++++++|||+.||++||+.++
T Consensus 151 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~di~~~~~~K~~ai~~l~~~~---~i~~~~vva~GD~~ND~~ml~~~~- 226 (267)
T d1nf2a_ 151 IDTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERM---NWKKEEIVVFGDNENDLFMFEEAG- 226 (267)
T ss_dssp ECCHHHHHHHHHHHHHHHTTTSEEEEEETTEEEEECTTCCHHHHHHHHHHHH---TCCGGGEEEEECSHHHHHHHTTCS-
T ss_pred eccHHHHHHHHHHHHHhhCCcEEEEEeecceeeecCCCCchhHHHHHHHHhh---ccCcccEEEEcCCcchHHHHHhCC-
Confidence 12345667777777776655556789999999999999999999999999 999999999999999999999997
Q ss_pred hcCCCCCCCCCceEEEEeCCC----CcccceEeC--ChhHHHHHHHHHH
Q 044635 780 SMAGPSIAPRAEVFACTVGRK----PSKAKYYLD--DTVEIVRLMQGLA 822 (831)
Q Consensus 780 ~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~--d~~eV~~~L~~L~ 822 (831)
++|+||++ +..|+|++. +.++|+.+|++|.
T Consensus 227 -------------~sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~~ll 262 (267)
T d1nf2a_ 227 -------------LRVAMENAIEKVKEASDIVTLTNNDSGVSYVLERIS 262 (267)
T ss_dssp -------------EEEECTTSCHHHHHHCSEECCCTTTTHHHHHHTTBC
T ss_pred -------------cEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHHH
Confidence 57899986 478889985 6788999998864
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.93 E-value=3.5e-26 Score=240.24 Aligned_cols=230 Identities=15% Similarity=0.197 Sum_probs=158.2
Q ss_pred cCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC----CCceEEecCCEEEEe
Q 044635 571 TTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC----ENLGIAAEHGYFFRL 646 (831)
Q Consensus 571 s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~----~~~~liaenGa~i~~ 646 (831)
..+|||++|+||||++ .++.+++++.++|++|++ .|+.|+++|||++..+.+++..+ +..+++++||+.++.
T Consensus 2 ~~iKli~~DlDGTL~~---~~~~i~~~~~~al~~L~~-~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~ 77 (271)
T d1rkqa_ 2 LAIKLIAIDMDGTLLL---PDHTISPAVKNAIAAARA-RGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQK 77 (271)
T ss_dssp CCCCEEEECCCCCCSC---TTSCCCHHHHHHHHHHHH-TTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEE
T ss_pred CCeeEEEEeCCccccC---CCCccCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEec
Confidence 3589999999999998 678899999999999987 59999999999999998887654 456799999999987
Q ss_pred CCCceEEEcCCcCCccHHHHHHHHHHHHhcc-----CCCeeEeeccc-------------eEEEe-eccCCC--cc----
Q 044635 647 RRDEEWETCIPVADCGWKQIAEPVMKLYTET-----TDGSTIEDKET-------------ALVWS-YEDADP--DF---- 701 (831)
Q Consensus 647 ~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~-----~~gs~ie~k~~-------------~l~~~-~~~~d~--~~---- 701 (831)
..+....... ..+......+..+.+.+... ..+.+...+.. ...+. ....++ .+
T Consensus 78 ~~~~~~i~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (271)
T d1rkqa_ 78 AADGSTVAQT-ALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVM 156 (271)
T ss_dssp TTTCCEEEEC-CBCHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEE
T ss_pred cCCCeEEEee-cccHHHHHHHHHHHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEE
Confidence 7554433221 12222223333333332110 01111111100 00000 000000 00
Q ss_pred ---chHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcc
Q 044635 702 ---GSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVII 778 (831)
Q Consensus 702 ---~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~ 778 (831)
.....++..+.+.+.+.+....+..+..++||.|+++|||.|+++|++++ +++++++++|||+.||++||+.++
T Consensus 157 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~p~~~~K~~al~~l~~~~---~i~~~~ii~~GD~~ND~~ml~~~~ 233 (271)
T d1rkqa_ 157 MIDEPAILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVL---GIKPEEIMAIGDQENDIAMIEYAG 233 (271)
T ss_dssp EECCHHHHHHHHHHSCHHHHHHEEEEEEETTEEEEEETTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSS
T ss_pred EecCHHHHHHHHHHHHHHhhcceEEEEecCceEEecCCCCCcccccceehhhc---ccchhcEEEEeCcHhHHHHHHhCC
Confidence 11233344444444443333456788999999999999999999999999 999999999999999999999998
Q ss_pred hhcCCCCCCCCCceEEEEeCCCC----cccceEeC--ChhHHHHHHHHHH
Q 044635 779 SSMAGPSIAPRAEVFACTVGRKP----SKAKYYLD--DTVEIVRLMQGLA 822 (831)
Q Consensus 779 ~~~~~~~~~~~~~~~~v~vG~~~----s~A~y~l~--d~~eV~~~L~~L~ 822 (831)
++++|||++ ..|+|++. +.++|+++|+++.
T Consensus 234 --------------~~~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~~~~ 269 (271)
T d1rkqa_ 234 --------------VGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKYV 269 (271)
T ss_dssp --------------EEEECTTSCHHHHHHCSEECCCTTTTHHHHHHHHHT
T ss_pred --------------cEEEeCCCCHHHHHhCCEEcCCCCcChHHHHHHHHh
Confidence 578888874 78899885 4678999998864
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.93 E-value=2.7e-25 Score=234.93 Aligned_cols=223 Identities=19% Similarity=0.225 Sum_probs=155.7
Q ss_pred ceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC-CCceEEecCCEEEEeCCCce
Q 044635 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC-ENLGIAAEHGYFFRLRRDEE 651 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~-~~~~liaenGa~i~~~~~~~ 651 (831)
+|||++|+||||++ .++.+++++.++|++|.+ .|+.|+++|||++..+.+.+..+ ...++|++||+.++++++..
T Consensus 1 iKli~~DlDGTLl~---~~~~i~~~~~~~l~~l~~-~Gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nG~~i~~~~~~~ 76 (285)
T d1nrwa_ 1 MKLIAIDLDGTLLN---SKHQVSLENENALRQAQR-DGIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGRL 76 (285)
T ss_dssp CCEEEEECCCCCSC---TTSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEECTTCCE
T ss_pred CeEEEEECCccccC---CCCccCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHhCCCcEEEecCceeEEecCCce
Confidence 58999999999998 678899999999999987 59999999999999999999877 35689999999999876655
Q ss_pred EEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceE-----------------------------------------
Q 044635 652 WETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETAL----------------------------------------- 690 (831)
Q Consensus 652 w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l----------------------------------------- 690 (831)
+.... .+ .+.+.++++.+.+......+...+...
T Consensus 77 i~~~~--i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (285)
T d1nrwa_ 77 YHHET--ID---KKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQSGF 151 (285)
T ss_dssp EEECC--CC---HHHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCCE
T ss_pred eeecc--CC---HHHHHHHHHHHHHcCCceEEecCceEEeccccHHHHHHHHHhhhhcCcccchhhhhhhhhhhhccccc
Confidence 54322 12 233444444443221111111100000
Q ss_pred EE--eecc---C-CCc-c-----chHHHHHHHHHHHhHhcCCCeE-EEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCC
Q 044635 691 VW--SYED---A-DPD-F-----GSCQAKELLDHLESVLANEPVT-VKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREML 757 (831)
Q Consensus 691 ~~--~~~~---~-d~~-~-----~~~~a~el~~~L~~~l~~~~v~-v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~ 757 (831)
.. .+.. . ++. . .......+...+........+. +.++..++||+|+++|||.|++++++++ |++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ldi~~~~~~K~~ai~~l~~~~---gi~ 228 (285)
T d1nrwa_ 152 AYINSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRYEHAEDLTLVSSAEHNFELSSRKASKGQALKRLAKQL---NIP 228 (285)
T ss_dssp EECSCGGGGTSSSSCCCEEEEEEECSCHHHHHHHHHHHTTCTTEEEECSSTTEEEEEETTCSHHHHHHHHHHHT---TCC
T ss_pred eeechHHHHhhcccchhheeeecccchHHHHHHHHHHhhcCCCeEEEEeCCcEEEEecccchhhhHHHHHHhhc---ccC
Confidence 00 0000 0 000 0 0001122222222222223344 4468899999999999999999999998 999
Q ss_pred cccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEeC--ChhHHHHHHHHH
Q 044635 758 PDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLD--DTVEIVRLMQGL 821 (831)
Q Consensus 758 ~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~--d~~eV~~~L~~L 821 (831)
++++++|||+.||++||+.++ ++|+|||+ +..|+|++. +.++|+++|++|
T Consensus 229 ~~~vi~~GD~~ND~~Ml~~a~--------------~svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~~l 284 (285)
T d1nrwa_ 229 LEETAAVGDSLNDKSMLEAAG--------------KGVAMGNAREDIKSIADAVTLTNDEHGVAHMMKHL 284 (285)
T ss_dssp GGGEEEEESSGGGHHHHHHSS--------------EEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHT
T ss_pred cccEEEEeCCHHHHHHHHhCC--------------eEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHh
Confidence 999999999999999999997 57889886 478899886 467899999886
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.92 E-value=1.1e-24 Score=227.81 Aligned_cols=223 Identities=14% Similarity=0.194 Sum_probs=147.6
Q ss_pred ceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHh---CCCCCceEEecCCEEEEeCCC
Q 044635 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWF---SPCENLGIAAEHGYFFRLRRD 649 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~---~~~~~~~liaenGa~i~~~~~ 649 (831)
.|+||||+||||++. ....++++++++|++|.+ .|+.|+++|||++..+...+ ......++|++||+.++.+++
T Consensus 1 ~k~if~DlDGTL~~~--~~~~i~~~~~~al~~l~~-~gi~v~~~TGR~~~~~~~l~~~~~~~~~~~~I~~nGa~i~~~~~ 77 (260)
T d2rbka1 1 TKALFFDIDGTLVSF--ETHRIPSSTIEALEAAHA-KGLKIFIATGRPKAIINNLSELQDRNLIDGYITMNGAYCFVGEE 77 (260)
T ss_dssp CCEEEECSBTTTBCT--TTSSCCHHHHHHHHHHHH-TTCEEEEECSSCGGGCCSCHHHHHTTCCCEEEEGGGTEEEETTE
T ss_pred CeEEEEECCCCCcCC--CCCCCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHHhcCCCCceEecCCcccccCcc
Confidence 379999999999973 346789999999999987 59999999999988665432 222456899999999998765
Q ss_pred ceEEEcCCcCCccHHHHHHHHHHHHhccCCCeeE-eeccceEEEe----------eccC--CCccch-------------
Q 044635 650 EEWETCIPVADCGWKQIAEPVMKLYTETTDGSTI-EDKETALVWS----------YEDA--DPDFGS------------- 703 (831)
Q Consensus 650 ~~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~i-e~k~~~l~~~----------~~~~--d~~~~~------------- 703 (831)
..+...+ +.+ .+..+++...+......+ .......... +... .+....
T Consensus 78 ~i~~~~l---~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (260)
T d2rbka1 78 VIYKSAI---PQE---EVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTP 151 (260)
T ss_dssp EEEECCC---CHH---HHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEE
T ss_pred cccccCC---CHH---HHHHHHHHHHHcCCcEEEEecCceeeccchHHHHHHHHHhhccCcCcccCHhHhcCcceEEEee
Confidence 4444333 222 333344333222111111 1111110000 0000 000000
Q ss_pred HHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCC
Q 044635 704 CQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAG 783 (831)
Q Consensus 704 ~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~ 783 (831)
...++....+.+.+... ....++..++||+|+++|||.|+++|++++ |++++++++||||.||++||+.++
T Consensus 152 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~ei~p~~~sK~~al~~l~~~~---~i~~~~~~a~GD~~ND~~Ml~~a~----- 222 (260)
T d2rbka1 152 FITEEEEKEVLPSIPTC-EIGRWYPAFADVTAKGDTKQKGIDEIIRHF---GIKLEETMSFGDGGNDISMLRHAA----- 222 (260)
T ss_dssp CCCHHHHHHHGGGSTTC-EEECSSTTCCEEESTTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSS-----
T ss_pred cCCHHHHHHHHHHhccc-cceeecCcEEEEEeCCCCHHHHHHHHHHhc---cccHhheeEecCCcccHHHHHhCC-----
Confidence 00011122222222221 233457789999999999999999999999 999999999999999999999998
Q ss_pred CCCCCCCceEEEEeCCC----CcccceEeC--ChhHHHHHHHHHH
Q 044635 784 PSIAPRAEVFACTVGRK----PSKAKYYLD--DTVEIVRLMQGLA 822 (831)
Q Consensus 784 ~~~~~~~~~~~v~vG~~----~s~A~y~l~--d~~eV~~~L~~L~ 822 (831)
++|+|||+ +..|+|++. +.++|+++|+++.
T Consensus 223 ---------~svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~~~~ 258 (260)
T d2rbka1 223 ---------IGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKHFG 258 (260)
T ss_dssp ---------EEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHHHT
T ss_pred ---------eEEEeCCCCHHHHHhCCEEeCCCCccHHHHHHHHhC
Confidence 57889987 478899875 4789999998864
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.92 E-value=2.3e-24 Score=226.86 Aligned_cols=235 Identities=19% Similarity=0.210 Sum_probs=167.2
Q ss_pred HHHHHhcCceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC-------CCceEE
Q 044635 565 VSAYKRTTTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC-------ENLGIA 637 (831)
Q Consensus 565 ~~~y~~s~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~-------~~~~li 637 (831)
-++++.+++|+|++|+||||+.. .+..++++++++|++|.+ .|+.|+|+|||++..+.+.++.+ .....|
T Consensus 2 ~~~~~~~~ikli~~DlDGTLl~~--~~~~i~~~~~~al~~l~~-~Gi~v~i~TGR~~~~~~~~~~~l~~~~~~~~~~~~i 78 (283)
T d2b30a1 2 EEALKGADIKLLLIDFDGTLFVD--KDIKVPSENIDAIKEAIE-KGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGV 78 (283)
T ss_dssp HHHTTTCCCCEEEEETBTTTBCC--TTTCSCHHHHHHHHHHHH-HTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEE
T ss_pred cccCcccCccEEEEECCCCCcCC--CCCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCcccccccCCceE
Confidence 36778899999999999999852 467899999999999977 59999999999999998887643 245678
Q ss_pred ecCCEEEEeCCCceEEEcCCcCCccHHHHHHHHHHHHhccCC--CeeEeeccceEE---------------------Eee
Q 044635 638 AEHGYFFRLRRDEEWETCIPVADCGWKQIAEPVMKLYTETTD--GSTIEDKETALV---------------------WSY 694 (831)
Q Consensus 638 aenGa~i~~~~~~~w~~~~~~~~~~w~~~v~~il~~~~e~~~--gs~ie~k~~~l~---------------------~~~ 694 (831)
+.||+.++...+....... .+. .....+++.+..... ..+....+.... ...
T Consensus 79 ~~~g~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (283)
T d2b30a1 79 YINGTIVYDQIGYTLLDET--IET---DVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRH 153 (283)
T ss_dssp EGGGTEEECTTCCEEEECC--CCH---HHHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECH
T ss_pred EEeeeEEEcCCCcEeeecc--cCH---HHHHHHHHHHHhhcccceEEEEecceeEEeccchHHHHHHHHhhccccccccH
Confidence 9999999887665543322 122 233334433322111 111111111100 000
Q ss_pred cc-CC-Cc-------cchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEc
Q 044635 695 ED-AD-PD-------FGSCQAKELLDHLESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVG 765 (831)
Q Consensus 695 ~~-~d-~~-------~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~G 765 (831)
.+ .+ .. ....+.+++...+.+.+......+.++..++||.|+++|||.|++++++.+ +++++++++||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~~l~~l~~~~---~i~~~~vi~~G 230 (283)
T d2b30a1 154 NEMLKYRTMNKLMIVLDPSESKTVIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHY---NISNDQVLVVG 230 (283)
T ss_dssp HHHTTCCCCSEEEECCCTTTHHHHHHHHHHHSTTTEEEEECTTSCEEEEETTCCHHHHHHHHHHHT---TCCGGGEEEEE
T ss_pred HHHhhcccceEEEEecCHHHHHHHHHHHHHHhcccceEEEecceeEeecCCcchhHHHHHHHhhhc---ccccceEEEec
Confidence 00 00 00 012345677778877776655566778899999999999999999999998 99999999999
Q ss_pred CCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEeCC---hhHHHHHHHHHHhh
Q 044635 766 DDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLDD---TVEIVRLMQGLACV 824 (831)
Q Consensus 766 D~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~d---~~eV~~~L~~L~~~ 824 (831)
||.||++||+.++ ++|+||++ +..|+|++.. ..+|..+|+++.+.
T Consensus 231 D~~ND~~Ml~~a~--------------~~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l~~~~~~ 282 (283)
T d2b30a1 231 DAENDIAMLSNFK--------------YSFAVANATDSAKSHAKCVLPVSHREGAVAYLLKKVFDL 282 (283)
T ss_dssp CSGGGHHHHHSCS--------------EEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHTT
T ss_pred CChhhHHHHHhCC--------------cEEEeCCCCHHHHHhCCEEECCcCCCcHHHHHHHHHHcC
Confidence 9999999999997 57888886 4688898853 34599999998764
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.91 E-value=4.4e-24 Score=217.42 Aligned_cols=218 Identities=18% Similarity=0.231 Sum_probs=154.9
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC-CCceEEecCCEEEEeCCCc
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC-ENLGIAAEHGYFFRLRRDE 650 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~-~~~~liaenGa~i~~~~~~ 650 (831)
|+|+|+||+||||++ .+..+++++.++|++|.+ .|..|+++|||+...+...+..+ .+.+++++||+.+......
T Consensus 1 kiK~i~~D~DGTL~~---~~~~i~~~~~~~l~~l~~-~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~ 76 (230)
T d1wr8a_ 1 KIKAISIDIDGTITY---PNRMIHEKALEAIRRAES-LGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKR 76 (230)
T ss_dssp CCCEEEEESTTTTBC---TTSCBCHHHHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEE
T ss_pred CceEEEEecCCCCcC---CCCccCHHHHHHHHHHHh-CCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccc
Confidence 579999999999998 778899999999999977 59999999999999888877544 3567999999999887554
Q ss_pred eEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCeE
Q 044635 651 EWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNL 730 (831)
Q Consensus 651 ~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~ 730 (831)
.+... ....| .....+...+...........+...+.+. ... ......+++.+++ ...+....+..+
T Consensus 77 ~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~-----~~~~~~~~~~~~ 143 (230)
T d1wr8a_ 77 IFLAS---MDEEW-ILWNEIRKRFPNARTSYTMPDRRAGLVIM-RET---INVETVREIINEL-----NLNLVAVDSGFA 143 (230)
T ss_dssp EESCC---CSHHH-HHHHHHHHHCTTCCBCTTGGGCSSCEEEC-TTT---SCHHHHHHHHHHT-----TCSCEEEECSSC
T ss_pred ccccc---ccHHH-HHHHHHHHhcccccceeecccceeeEEEe-ccc---ccHHHHHHHHHHh-----ccceEEeeCCcE
Confidence 43221 12222 12233333332221111112222223222 111 1111223333322 223566788899
Q ss_pred EEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----Ccccce
Q 044635 731 VEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKY 806 (831)
Q Consensus 731 vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y 806 (831)
+||+|++++|+.|++++++++ |++++++++|||+.||++||+.++ ++|+||++ +..|+|
T Consensus 144 iei~~~~~~K~~al~~l~~~~---~i~~~~~~~iGD~~NDi~ml~~ag--------------~~vav~na~~~~k~~A~~ 206 (230)
T d1wr8a_ 144 IHVKKPWINKGSGIEKASEFL---GIKPKEVAHVGDGENDLDAFKVVG--------------YKVAVAQAPKILKENADY 206 (230)
T ss_dssp EEEECTTCCHHHHHHHHHHHH---TSCGGGEEEEECSGGGHHHHHHSS--------------EEEECTTSCHHHHTTCSE
T ss_pred EEEeeCCcCcchhhccccccc---ccchhheeeeecCccHHHHHHHCC--------------eEEEECCCCHHHHHhCCE
Confidence 999999999999999999998 999999999999999999999997 57889886 568999
Q ss_pred EeC--ChhHHHHHHHHHHh
Q 044635 807 YLD--DTVEIVRLMQGLAC 823 (831)
Q Consensus 807 ~l~--d~~eV~~~L~~L~~ 823 (831)
+++ +.++|++.|+.+..
T Consensus 207 v~~~~~~~gv~~~i~~~l~ 225 (230)
T d1wr8a_ 207 VTKKEYGEGGAEAIYHILE 225 (230)
T ss_dssp ECSSCHHHHHHHHHHHHHH
T ss_pred EECCCCcCHHHHHHHHHHH
Confidence 985 45789988887764
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.90 E-value=2.3e-23 Score=212.84 Aligned_cols=214 Identities=15% Similarity=0.134 Sum_probs=153.4
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC-CCceEEecCCEEEEeCCCc
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC-ENLGIAAEHGYFFRLRRDE 650 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~-~~~~liaenGa~i~~~~~~ 650 (831)
.+|+|+||+||||++ ....+++++.++|++|.+ .|+.|+++|||+...+......+ ....++++||+.+..+...
T Consensus 2 miKli~~D~DGTL~~---~~~~i~~~~~~al~~l~~-~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~ 77 (225)
T d1l6ra_ 2 MIRLAAIDVDGNLTD---RDRLISTKAIESIRSAEK-KGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGS 77 (225)
T ss_dssp CCCEEEEEHHHHSBC---TTSCBCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSC
T ss_pred CeEEEEEecCCCCcC---CCCcCCHHHHHHHHHHHH-CCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCcc
Confidence 478999999999998 778899999999999987 59999999999998776665433 2567999999999887665
Q ss_pred eEEEcCCcCCccHHHHHHHHHHHHhccCCCeeEeecc-ceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCe
Q 044635 651 EWETCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKE-TALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQN 729 (831)
Q Consensus 651 ~w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~-~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~ 729 (831)
.+.... . +.....++...++..-..+.... ....+.+. .++ .+.+.+ ...+......+..+..
T Consensus 78 ~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~----~~~~~~~~~~i~~~~~ 141 (225)
T d1l6ra_ 78 IKKFFS-N------EGTNKFLEEMSKRTSMRSILTNRWREASTGFD-IDP----EDVDYV----RKEAESRGFVIFYSGY 141 (225)
T ss_dssp EEESSC-S------HHHHHHHHHHTTTSSCBCCGGGGGCSSSEEEB-CCG----GGHHHH----HHHHHTTTEEEEEETT
T ss_pred EEEecC-h------HHHHHHHHHHHHhcCcceeecccceeeeeccc-cCH----HHHHHH----HHHHhhcCcEEEECCc
Confidence 554221 1 22334444433322111111100 00011111 111 122223 3333345677888889
Q ss_pred EEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----Ccccc
Q 044635 730 LVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAK 805 (831)
Q Consensus 730 ~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~ 805 (831)
.+||.|+++|||.|+++|++++ |++++++++||||.||++||+.++ ++|+||++ ++.|+
T Consensus 142 ~~~i~~~~~~K~~ai~~l~~~~---~i~~~~v~~~GDs~nD~~m~~~a~--------------~~vav~na~~~~k~~ad 204 (225)
T d1l6ra_ 142 SWHLMNRGEDKAFAVNKLKEMY---SLEYDEILVIGDSNNDMPMFQLPV--------------RKACPANATDNIKAVSD 204 (225)
T ss_dssp EEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEECCSGGGHHHHTSSS--------------EEEECTTSCHHHHHHCS
T ss_pred EEEecCCccchHHHHHHHhhhh---ccchhheeeecCCcchHHHHHHCC--------------eEEEECCCcHHHHHhCC
Confidence 9999999999999999999998 999999999999999999999997 57888885 46899
Q ss_pred eEe--CChhHHHHHHHHHH
Q 044635 806 YYL--DDTVEIVRLMQGLA 822 (831)
Q Consensus 806 y~l--~d~~eV~~~L~~L~ 822 (831)
|++ ++.++|+++|+.+.
T Consensus 205 ~v~~~~~~~gi~~~l~~~~ 223 (225)
T d1l6ra_ 205 FVSDYSYGEEIGQIFKHFE 223 (225)
T ss_dssp EECSCCTTHHHHHHHHHTT
T ss_pred EEECCCCcCHHHHHHHHhC
Confidence 988 45689999998763
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=99.88 E-value=4.8e-23 Score=212.94 Aligned_cols=217 Identities=15% Similarity=0.159 Sum_probs=141.9
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC---CCceEEecCCEEEEeCC
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC---ENLGIAAEHGYFFRLRR 648 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~---~~~~liaenGa~i~~~~ 648 (831)
++.||++|+||||++ .++. ++..+++.++.+ .|..|+++|||+...+.++++.+ ...++|++||+.++.+.
T Consensus 2 ~~~li~~DlDGTL~~---~~~~--~~~~~~~~~~~~-~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~ 75 (244)
T d1s2oa1 2 RQLLLISDLDNTWVG---DQQA--LEHLQEYLGDRR-GNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPE 75 (244)
T ss_dssp CSEEEEECTBTTTBS---CHHH--HHHHHHHHHTTG-GGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETT
T ss_pred CceEEEEECcccCCC---CCCC--HHHHHHHHHHHc-CCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEcc
Confidence 567999999999998 3332 344556666655 59999999999999998888643 23578999999999875
Q ss_pred Cce--EEEcCCcCCccHHHHHHHHHHHHhccCCCeeE----eeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCe
Q 044635 649 DEE--WETCIPVADCGWKQIAEPVMKLYTETTDGSTI----EDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPV 722 (831)
Q Consensus 649 ~~~--w~~~~~~~~~~w~~~v~~il~~~~e~~~gs~i----e~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v 722 (831)
... |.... ...|. ..++..+.+..++... +.....+.+.+...... ...+++...+++.. ....
T Consensus 76 ~~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~ 145 (244)
T d1s2oa1 76 GLDQHWADYL---SEHWQ---RDILQAIADGFEALKPQSPLEQNPWKISYHLDPQACP---TVIDQLTEMLKETG-IPVQ 145 (244)
T ss_dssp EECHHHHHHH---HTTCC---HHHHHHHHHTCTTEEECCGGGCBTTBEEEEECTTSCT---HHHHHHHHHHHTSS-CCEE
T ss_pred CcchHHHHHH---HHHHh---HHHHHHHHhhcccccccChhhhcceEEEEeccccccH---HHHHHHHHHHHhhc-ccce
Confidence 432 11111 11111 1122222333333322 22233445544432211 12333333333322 1223
Q ss_pred EEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCC-
Q 044635 723 TVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKP- 801 (831)
Q Consensus 723 ~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~- 801 (831)
....+..++||+|++++||.|+++|++.+ |++++++++||||.||++||+.++ ++|+|||+.
T Consensus 146 ~~~~~~~~~~i~~~~~~K~~a~~~l~~~~---gi~~~~~v~~GD~~ND~~Ml~~~~--------------~~vav~na~~ 208 (244)
T d1s2oa1 146 VIFSSGKDVDLLPQRSNKGNATQYLQQHL---AMEPSQTLVCGDSGNDIGLFETSA--------------RGVIVRNAQP 208 (244)
T ss_dssp EEEETTTEEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEEECSGGGHHHHTSSS--------------EEEECTTCCH
T ss_pred eeecCCcEEEEEeCccchhHHHHHHHHhc---cCChhhEEEEcCCCCCHHHHhhCC--------------cEEEeCCCCH
Confidence 45678889999999999999999999998 999999999999999999999997 578999852
Q ss_pred ---cccc-------eEe--CChhHHHHHHHHH
Q 044635 802 ---SKAK-------YYL--DDTVEIVRLMQGL 821 (831)
Q Consensus 802 ---s~A~-------y~l--~d~~eV~~~L~~L 821 (831)
..|+ |.. +..++|++.|+.+
T Consensus 209 ~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~f 240 (244)
T d1s2oa1 209 ELLHWYDQWGDSRHYRAQSSHAGAILEAIAHF 240 (244)
T ss_dssp HHHHHHHHHCCTTEEECSSCHHHHHHHHHHHT
T ss_pred HHHHHhhcccccceEEcCCCCccHHHHHHHHh
Confidence 3343 333 2467888888765
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.87 E-value=2.6e-23 Score=213.65 Aligned_cols=223 Identities=18% Similarity=0.147 Sum_probs=138.3
Q ss_pred ceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC-CCceEEecCCEEEEeCCCce
Q 044635 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC-ENLGIAAEHGYFFRLRRDEE 651 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~-~~~~liaenGa~i~~~~~~~ 651 (831)
+|+||+|+||||++ ... +++++++|++|.+ .|+.|+++|||++..+..++..+ ...++|++||+.++.+++..
T Consensus 2 iKli~~DlDGTLl~---~~~--~~~~~~ai~~l~~-~G~~~~~aTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~ 75 (243)
T d1wzca1 2 IRLIFLDIDKTLIP---GYE--PDPAKPIIEELKD-MGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGYF 75 (243)
T ss_dssp EEEEEECCBTTTBS---SSC--SGGGHHHHHHHHH-TTEEEEEECSSCHHHHHHHHHHHTCCSCEEETTTTEEEECTTCC
T ss_pred cEEEEEeCCCCCCC---CCC--CHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHhcccccccccCCcEEEcCCCce
Confidence 69999999999997 332 5778999999987 59999999999999999998876 35679999999999886543
Q ss_pred EEEcCCcC---------CccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCc---------cchHHHHHHHHHH
Q 044635 652 WETCIPVA---------DCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPD---------FGSCQAKELLDHL 713 (831)
Q Consensus 652 w~~~~~~~---------~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~---------~~~~~a~el~~~L 713 (831)
........ ...+ +.+...+..+...................+....++ +...........+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (243)
T d1wzca1 76 PFDVKGKEVGNYIVIELGIRV-EKIREELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAMEREYSETIFEWSRDGW 154 (243)
T ss_dssp C----------CEEEECSCCH-HHHHHHHHHHHHHHTCBCGGGSCHHHHHHHHCCCGGGHHHHTCCSSEEEECBCSSSCH
T ss_pred ecccchhHHHHHHHHHHhhhH-HHHHHHHHhhhhhcccchhhhhhHHHHHHhhcCchhHHHHHHhhhcchhhhhhhhHHH
Confidence 22111000 0111 122222221111000000000000000000000000 0000000000001
Q ss_pred HhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceE
Q 044635 714 ESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVF 793 (831)
Q Consensus 714 ~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~ 793 (831)
.+......+.+..+ ..+++.|++++||.|++++++++. ++++++++||||+.||++||++++ +
T Consensus 155 ~~~~~~~~~~~~~~-~~~~~~~~~~~K~~al~~l~~~~~--~~~~~~~~a~GD~~ND~~Ml~~a~--------------~ 217 (243)
T d1wzca1 155 EEVLVEGGFKVTMG-SRFYTVHGNSDKGKAAKILLDFYK--RLGQIESYAVGDSYNDFPMFEVVD--------------K 217 (243)
T ss_dssp HHHHHHTTCEEEEC-SSSEEEECSCCHHHHHHHHHHHHH--TTSCEEEEEEECSGGGHHHHTTSS--------------E
T ss_pred HHhhhhcCeEEeec-ccccchhhhhccHHHHHHHHHHhc--CCCcccEEEEcCCHhHHHHHHcCC--------------c
Confidence 11111233445444 447899999999999999999872 378899999999999999999998 5
Q ss_pred EEEeCCCCcccceEeCChhHHHHHHH
Q 044635 794 ACTVGRKPSKAKYYLDDTVEIVRLMQ 819 (831)
Q Consensus 794 ~v~vG~~~s~A~y~l~d~~eV~~~L~ 819 (831)
+|+|||+..+++-.+++..|+.++++
T Consensus 218 ~va~~Na~~~~~~~~~~i~~~~~~i~ 243 (243)
T d1wzca1 218 VFIVGSLKHKKAQNVSSIIDVLEVIK 243 (243)
T ss_dssp EEEESSCCCTTCEEESCHHHHHHHHT
T ss_pred EEEeCCCChHHHhhhhHHHHHHHhhC
Confidence 79999998888888999988888763
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.86 E-value=1.4e-21 Score=198.64 Aligned_cols=202 Identities=18% Similarity=0.143 Sum_probs=125.5
Q ss_pred ceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC--CCceEEecCCEEEEeCCCc
Q 044635 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC--ENLGIAAEHGYFFRLRRDE 650 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~--~~~~liaenGa~i~~~~~~ 650 (831)
..|||+|+||||++ .++.++++++++|++|.+ .|+.|+++|||+...+.+.+..+ ...++|++||+.++.....
T Consensus 4 ~~li~~DlDGTLl~---~~~~i~~~~~~al~~l~~-~Gi~~~i~TGR~~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~ 79 (232)
T d1xvia_ 4 PLLVFSDLDGTLLD---SHSYDWQPAAPWLTRLRE-ANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQW 79 (232)
T ss_dssp CEEEEEECTTTTSC---SSCCSCCTTHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTTC
T ss_pred CEEEEEECCCCccC---CcCcCCHHHHHHHHHHHH-CCCEEEEEeCCChhhchhHHHHhccCCceEEccCCeEEEecCCc
Confidence 45899999999998 677889999999999977 59999999999999999988765 3578999999999876542
Q ss_pred eEEEcC----CcCCccHHHHHHHHHHHHhccCCCeeEeecc---ceEEEeec----------cCCCccchHHHHHHHHHH
Q 044635 651 EWETCI----PVADCGWKQIAEPVMKLYTETTDGSTIEDKE---TALVWSYE----------DADPDFGSCQAKELLDHL 713 (831)
Q Consensus 651 ~w~~~~----~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~---~~l~~~~~----------~~d~~~~~~~a~el~~~L 713 (831)
...... ......+............ ........... .....++. ............+....+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (232)
T d1xvia_ 80 QEIDGFPRIISGISHGEISLVLNTLREKE-HFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQF 158 (232)
T ss_dssp TTSTTTTEEECSSCHHHHHHHHHHHHHHH-CCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECSCHHHHHHH
T ss_pred cccchhhhhhhHHHHHHHHHhhhhhhhhh-ccccccccchhhhhhhhhhcccchhhhhhhhcceeeeecccccHHHHHHH
Confidence 211000 0011111111111111110 00000000000 00000000 000000000001112222
Q ss_pred HhHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 714 ESVLANEPVTVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 714 ~~~l~~~~v~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
..........+..+..++++.|.+++||.|+++|++.+...|+++++++||||+.||++||++++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~ 224 (232)
T d1xvia_ 159 TARLNELGLQFMQGARFWHVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDY 224 (232)
T ss_dssp HHHHHHTTEEEEECSSCEEEEETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSE
T ss_pred HHHhhhccceeeeccceeeccCCCchHHHHHHHHHHHHHHcCCChhcEEEEcCCHhHHHHHHhCCe
Confidence 222233445677788889999999999999999998765558999999999999999999999984
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=1.3e-20 Score=192.36 Aligned_cols=216 Identities=15% Similarity=0.107 Sum_probs=134.6
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC---CCceEEecCCEEEEeCC
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC---ENLGIAAEHGYFFRLRR 648 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~---~~~~liaenGa~i~~~~ 648 (831)
..||++||+||||++ .++.++++++++|++|.+ ++.++++|||+...+...+... ...++++.||+++...+
T Consensus 2 ~~kl~~fDlDGTLl~---~~~~i~~~~~~al~~l~~--~g~~~i~Tgr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (243)
T d2amya1 2 GPALCLFDVDGTLTA---PRQKITKEMDDFLQKLRQ--KIKIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYKDG 76 (243)
T ss_dssp CSEEEEEESBTTTBC---TTSCCCHHHHHHHHHHTT--TSEEEEECSSCHHHHHHHHCTTHHHHCSEEESGGGTEEEETT
T ss_pred CCEEEEEcCcCCeeC---CCCcCCHHHHHHHHHHHc--CCCEEEEcCCChHHhHHHHhhhccccceEEecCcEEEEecCC
Confidence 478999999999999 788999999999999965 5578999999999888877664 23556666777776665
Q ss_pred CceEEEcCCcCC-c-cHHHHHHHHHHHHhccC----CCeeEeeccceEEEeeccCCCcc-----------chHHHHHHHH
Q 044635 649 DEEWETCIPVAD-C-GWKQIAEPVMKLYTETT----DGSTIEDKETALVWSYEDADPDF-----------GSCQAKELLD 711 (831)
Q Consensus 649 ~~~w~~~~~~~~-~-~w~~~v~~il~~~~e~~----~gs~ie~k~~~l~~~~~~~d~~~-----------~~~~a~el~~ 711 (831)
+..+........ . .+..........+.... .....+.......+......... ......+...
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (243)
T d2amya1 77 KLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVA 156 (243)
T ss_dssp EEEEECCHHHHHCHHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHHHHHHHHHCHHHHHHH
T ss_pred ccceecchhHHHHHHHHHHHHhhhhhhheeccccccccchhhhhhhhhcccccccccchhhhhhhhhhhcchhhhHHHHH
Confidence 544443221100 0 00000111111111110 01111111222222222111110 0112334455
Q ss_pred HHHhHhcCCCe-EEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcC----CchhHHHHHHcchhcCCCCC
Q 044635 712 HLESVLANEPV-TVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGD----DRSDEDMFEVIISSMAGPSI 786 (831)
Q Consensus 712 ~L~~~l~~~~v-~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD----~~NDe~Mf~~a~~~~~~~~~ 786 (831)
.+.+......+ ...++..++||+|+++|||+|+++|+ +++++++++||| |.||++||++++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~lei~~~~vsKg~al~~l~------~~~~~ev~afGD~~~~g~NDi~Ml~~~g~------- 223 (243)
T d2amya1 157 DLRKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHVE------NDGYKTIYFFGDKTMPGGNDHEIFTDPRT------- 223 (243)
T ss_dssp HHHHHTTTSCEEEEEETTTEEEEEETTCSGGGGGGGTT------TSCCSEEEEEECSCC---CCCHHHHCTTE-------
T ss_pred HHHHHhcccceEEEecCCccceeeccccCHHHHHHHHh------CCCcceEEEEcCCCCCCCCcHHHHHccCC-------
Confidence 55555544444 45577899999999999999999884 568899999999 6799999999873
Q ss_pred CCCCceEEEEeCCCCcccceEeCChhHHHHHHHHHH
Q 044635 787 APRAEVFACTVGRKPSKAKYYLDDTVEIVRLMQGLA 822 (831)
Q Consensus 787 ~~~~~~~~v~vG~~~s~A~y~l~d~~eV~~~L~~L~ 822 (831)
.+++ +++++++.+.++.|+
T Consensus 224 ------~~~~-----------v~~~~~~~~~~~~l~ 242 (243)
T d2amya1 224 ------MGYS-----------VTAPEDTRRICELLF 242 (243)
T ss_dssp ------EEEE-----------CSSHHHHHHHHHHHC
T ss_pred ------cEEE-----------eCCHHHHHHHHHHHh
Confidence 2333 467899999988875
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.82 E-value=4.9e-19 Score=196.82 Aligned_cols=288 Identities=16% Similarity=0.143 Sum_probs=203.5
Q ss_pred CCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCCh---HHhhc------CC--ChHHHHHHHhcCCeEeecCHHhHH
Q 044635 202 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSS---EIYKT------LP--IREEILRALLNSDLIGFHTFDYAR 270 (831)
Q Consensus 202 ~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~---e~f~~------lp--~r~eil~~ll~~dligf~t~~~~~ 270 (831)
.|+|++|+++..+++.++++. .++++.+.+|..++.. ..+.. .. .......+...+|.+...+...+.
T Consensus 121 pDiIh~~~~~~~~~~~~~~~~-~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~ 199 (437)
T d2bisa1 121 PDVVHFHDWHTVFAGALIKKY-FKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLI 199 (437)
T ss_dssp CSEEEEETGGGHHHHHHHHHH-HCCCEEEEESSCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHSSEEEESCHHHHH
T ss_pred CCEEEECChhhhhHhhhhhcc-ccCceeEEEeeccccccchhhhhhccchhhhhHHHHHHHHHHHHhhhhhcccchhhhh
Confidence 389999999988887777654 5789999999887642 11111 11 112334456678999888776654
Q ss_pred HHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCccc
Q 044635 271 HFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDI 350 (831)
Q Consensus 271 ~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld~ 350 (831)
.... .++. ...++.++|+|+|++.|.+....+........++++++..++++|+++||++.
T Consensus 200 ~~~~----~~~~---------------~~~ki~vi~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~ 260 (437)
T d2bisa1 200 DEWG----FFRN---------------FEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDR 260 (437)
T ss_dssp HTHH----HHGG---------------GTTTEEECCCCCCTTTSCGGGCCSCHHHHHHHHHHHTTCCSCEEEEEESCBCS
T ss_pred hhhh----hhcc---------------ccCceEEEecccccccccccccchhhHHHHHhhhhhhhccCCceEEEeecccc
Confidence 3322 1111 01145678999999988776655555566677788887567899999999975
Q ss_pred -ccCHHHHHHHHHHHHHh--CCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHH
Q 044635 351 -FKGISLKLLAMEQLLIQ--HPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFY 427 (831)
Q Consensus 351 -~KGi~~~l~A~~~lL~~--~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~ 427 (831)
.||+..+++|++.+..+ +|+ +.|+++|.. .+.+.. .++.+.. ..+ .++++.+.++.+
T Consensus 261 ~~Kg~~~ll~a~~~~~~~~~~~~----~~lvi~G~~----~~~~~~---~~~~~~~----~~~-----~~~~~~~~~~~~ 320 (437)
T d2bisa1 261 GQKGVDVLLKAIEILSSKKEFQE----MRFIIIGKG----DPELEG---WARSLEE----KHG-----NVKVITEMLSRE 320 (437)
T ss_dssp SSSCHHHHHHHHHHHTTSGGGGG----EEEEEECCB----CHHHHH---HHHHHHH----TCT-----TEEEECSCCCHH
T ss_pred cchhHHHHHhhhccccccccccc----ceeeeeccc----cccccc---chhhhcc----ccc-----cceeccccCcHH
Confidence 79999999999988653 354 448888832 122222 2222221 122 366778889999
Q ss_pred HHHHHHHHcCEeEECCCccCCCC---CCCC-CceEEEeccccccccc--CCCceeCCCCHHHHHHHHHHHhcCCHHHHHH
Q 044635 428 ERIAYYVVAECCLVTAVRDGSEP---SSPK-KSMLVVSEFIGCSPSL--SGAIRVNPWNIDAVSDAMDSALEMADQEKQL 501 (831)
Q Consensus 428 el~aly~~ADv~vvtS~~eGma~---~~~~-~g~lVlSe~~G~~~~l--~~allVnP~d~~~~A~ai~~aL~m~~~er~~ 501 (831)
++..+|+.||++++||..||+.. ++.. +.|+|+|...|..+.+ .+|++|+|.|++++|++|.++|.++++.+++
T Consensus 321 ~~~~~~~~adi~v~~s~~e~~~~~~~Eama~G~Pvi~~~~g~~~e~i~~~~G~~~~~~d~~~la~~i~~ll~~~~~~~~~ 400 (437)
T d2bisa1 321 FVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSK 400 (437)
T ss_dssp HHHHHHTTCSEEEECCSCCSSCHHHHHHHTTTCEEEEESCTTHHHHCCTTTCEEECTTCHHHHHHHHHHHHTTTTSCTHH
T ss_pred HHHHHHhhhccccccccccccchHHHHHHHCCCCEEEeCCCCcHHhEECCcEEEECCCCHHHHHHHHHHHHhCCHHHHHH
Confidence 99999999999999999999821 2222 4566777776666655 4689999999999999999999877666666
Q ss_pred HHHHHhhhhccCCHHHHHHHHHHHHHHH
Q 044635 502 RHEKHYRYVSTHDVGYWARSFLQDLERT 529 (831)
Q Consensus 502 r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 529 (831)
..+..++.++++++..+++++++-.+++
T Consensus 401 ~~~~~~~~~~~~s~~~~a~~~~~iY~~~ 428 (437)
T d2bisa1 401 FRENCKKRAMSFSWEKSAERYVKAYTGS 428 (437)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 6777788888899999999887765543
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.80 E-value=1.4e-18 Score=197.08 Aligned_cols=314 Identities=13% Similarity=0.143 Sum_probs=202.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHcCC-CCCEEEEeCccccchHHHHH-hhcCCCeEEEEEeccCC----ChHHhhcCC-----
Q 044635 178 SLWQAYVSVNKIFADRIMEVINP-EDDFVWVHDYHLMVLPTFLR-KRFNRVKLGFFLHSPFP----SSEIYKTLP----- 246 (831)
Q Consensus 178 ~~w~~Y~~vN~~fa~~i~~~~~~-~~d~vwvhDyhL~llp~~lr-~~~~~~~i~~flH~PfP----~~e~f~~lp----- 246 (831)
..|..|...++.+++.+.+.... ..|+|++||+|-.+++.+++ .+.+++|+.+++|.... ....+..+.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~pDIvH~h~~~~~l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~ 185 (477)
T d1rzua_ 106 DNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHA 185 (477)
T ss_dssp THHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGG
T ss_pred ccHHHHHHHHHHHHhhhhhcccCCCCCEEEecchhHHHHHHHHHHhhCCCCCEEEEEecccccccCCHHHHHHhhcchhh
Confidence 46888999898888766555421 12899999999999999886 45678999999996421 112222111
Q ss_pred ----------ChHHHHHHHhcCCeEeecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHH
Q 044635 247 ----------IREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQS 316 (831)
Q Consensus 247 ----------~r~eil~~ll~~dligf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~ 316 (831)
...-+..++..+|.+-.-+..|++..+..-. ..+.+.. ...+..++.++|+|+|.+.|.+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~~~~~~~-~~~~~~~---------~~~~~~~~~vi~ngv~~~~~~p 255 (477)
T d1rzua_ 186 FGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEF-GMGLEGV---------IGSRAHVLHGIVNGIDADVWNP 255 (477)
T ss_dssp SSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSHHH-HTTCHHH---------HHTTGGGEEECCCCBCTTTSCT
T ss_pred cccccccccchhHHHHHHHHhhhhhhhccHHHHHHHHHHhc-Ccchhhh---------hhhccccEEEEECCcchhhccc
Confidence 0123345677899999988888876643210 0111100 0112235678999999887753
Q ss_pred hhCC-----------cchHHHHHHHHHHhc--cCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 044635 317 VLSL-----------PGTEAKVSELIKQFH--DQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANP 383 (831)
Q Consensus 317 ~~~~-----------~~~~~~~~~lr~~~~--~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p 383 (831)
.... .......+.++.+++ .+++++|+++||+++.||++.+++|+++++++++. |+++|.
T Consensus 256 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~~------l~~~G~- 328 (477)
T d1rzua_ 256 ATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGR------LVVLGA- 328 (477)
T ss_dssp TTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHTTCE------EEEEEC-
T ss_pred cccccccccchhhhHHHhhhhHHHHHHhcccccCCccEEEEEeeeeecCCcHHHHHHHHHHHhhCCe------EEEEec-
Confidence 2110 011233445566665 34568999999999999999999999999887543 666663
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCCC---CCCC-CceEE
Q 044635 384 ARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEP---SSPK-KSMLV 459 (831)
Q Consensus 384 ~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~---~~~~-~g~lV 459 (831)
|+. ....++.++..+.+. .+.+. +..+.+++..+|+.||+||+||.+|||.. +++. +.|+|
T Consensus 329 ----G~~--~~~~~~~~~~~~~~~--------~v~~~-~~~~~~~~~~~~~~aD~~v~PS~~E~fglv~lEAma~G~PvV 393 (477)
T d1rzua_ 329 ----GDV--ALEGALLAAASRHHG--------RVGVA-IGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPV 393 (477)
T ss_dssp ----BCH--HHHHHHHHHHHHTTT--------TEEEE-ESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEE
T ss_pred ----CCc--hHHHHHHHHHhhcCC--------eEEEE-cccChhHHHHHHHhCccccCCccccCCCHHHHHHHHcCCCEE
Confidence 222 223334444444332 24443 46788899999999999999999999832 3333 45778
Q ss_pred EecccccccccC------------CCceeCCCCHHHHHHHHHHHhcC--CHHHHHHHHHHHhhhhccCCHHHHHHHHHHH
Q 044635 460 VSEFIGCSPSLS------------GAIRVNPWNIDAVSDAMDSALEM--ADQEKQLRHEKHYRYVSTHDVGYWARSFLQD 525 (831)
Q Consensus 460 lSe~~G~~~~l~------------~allVnP~d~~~~A~ai~~aL~m--~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~ 525 (831)
+|...|..+.+. +|++|+|.|++++|++|.++|+. .++.+++..++.. -+.+++..-+++.++-
T Consensus 394 as~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~a~--~~~fsw~~~a~~~~~l 471 (477)
T d1rzua_ 394 VARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGM--KSDVSWEKSAGLYAAL 471 (477)
T ss_dssp EESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHH--TCCCBHHHHHHHHHHH
T ss_pred EcCCCCCcceeecCCccccccCCCceEEeCCCCHHHHHHHHHHHHhhhCCHHHHHHHHHHHH--HhhCCHHHHHHHHHHH
Confidence 888877777662 57999999999999999998863 2333332222221 1346766666665543
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.78 E-value=1.1e-18 Score=177.48 Aligned_cols=192 Identities=17% Similarity=0.155 Sum_probs=114.1
Q ss_pred eeEE-ecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCC-C----CCceEEecCCEEEEeC
Q 044635 574 RAIL-LDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSP-C----ENLGIAAEHGYFFRLR 647 (831)
Q Consensus 574 rli~-~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~-~----~~~~liaenGa~i~~~ 647 (831)
|+|+ ||+||||++ .+++++++++++|++|.+ .| .++++|||........+.. + ...++++.||+++...
T Consensus 1 k~i~lFDlDGTLl~---~~~~is~~~~~~i~~l~~-~g-~~~i~tgrr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 75 (244)
T d2fuea1 1 RVLCLFDVDGTLTP---ARQKIDPEVAAFLQKLRS-RV-QIGVVGGSDYCKIAEQLGDGDEVIEKFDYVFAENGTVQYKH 75 (244)
T ss_dssp CEEEEEESBTTTBS---TTSCCCHHHHHHHHHHTT-TS-EEEEECSSCHHHHHHHHSSTTTHHHHCSEEEEGGGTEEEET
T ss_pred CEEEEEccccCccC---CCCcCCHHHHHHHHHHHh-CC-CEEEEecCChhhhhhhhhhhhccccccceeecccceeeccC
Confidence 4555 599999999 778899999999999976 35 5667777776665554433 3 2467899999999887
Q ss_pred CCceEEEcCCcCCccHHHHHHHHHHH----Hhcc----CCCeeEeeccceEEEeeccCCCccc-----------hHHHHH
Q 044635 648 RDEEWETCIPVADCGWKQIAEPVMKL----YTET----TDGSTIEDKETALVWSYEDADPDFG-----------SCQAKE 708 (831)
Q Consensus 648 ~~~~w~~~~~~~~~~w~~~v~~il~~----~~e~----~~gs~ie~k~~~l~~~~~~~d~~~~-----------~~~a~e 708 (831)
+...|...... ............. .... ....+.........++......... .....+
T Consensus 76 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (244)
T d2fuea1 76 GRLLSKQTIQN--HLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREK 153 (244)
T ss_dssp TEECCCCCHHH--HHCHHHHHHHHHHHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTCCHHHHHHHHHHHHHHCHHHH
T ss_pred CccceeechhH--HHhhhHHHHHHhhhhhhhheecccccccchhhhhhhhhhccccccccchhhhhhhhhhccchhhHHH
Confidence 65444322211 0011111111111 1111 1111111112222222221111100 001122
Q ss_pred HHHHHHhHhcCCCe-EEEEcCeEEEEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCc----hhHHHHHHcc
Q 044635 709 LLDHLESVLANEPV-TVKSGQNLVEVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDR----SDEDMFEVII 778 (831)
Q Consensus 709 l~~~L~~~l~~~~v-~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~----NDe~Mf~~a~ 778 (831)
....+......... ...++..++||+|+++|||+|+++|++ .++++|++|||+. ||++||+.++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~lei~~~~vsKg~al~~L~~------~~~~ev~afGD~~~~G~ND~eml~~a~ 222 (244)
T d2fuea1 154 FVEALKTEFAGKGLRFSRGGMISFDVFPEGWDKRYCLDSLDQ------DSFDTIHFFGNETSPGGNDFEIFADPR 222 (244)
T ss_dssp HHHHHHHHTTTSCEEEECCSSSCEEEEETTCSTTHHHHHHTT------SCCSEEEEEESCCSTTSTTHHHHHSTT
T ss_pred HHHHHHHHhhccceeEeeccCccceecchhccHHHHHHHHhc------CChhhEEEEcCCCCCCCCcHHHHHcCC
Confidence 23333333333333 344678999999999999999999874 4789999999975 9999999997
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.72 E-value=4.7e-17 Score=162.08 Aligned_cols=185 Identities=17% Similarity=0.160 Sum_probs=136.4
Q ss_pred ccChHHHHHhhCCcchHHHHHHHHHHhccCCcEEEEeccCcc-cccCHHHHHHHHHHHHHh--CCCCCCcEEEEEEecCC
Q 044635 308 GIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMD-IFKGISLKLLAMEQLLIQ--HPEWQGKVVLVQIANPA 384 (831)
Q Consensus 308 GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~iil~VdRld-~~KGi~~~l~A~~~lL~~--~P~~~~~vvLvqig~p~ 384 (831)
|||.+.|.+........+....++++|+.+++++|+++||++ +.||++.+++|++.+.++ +|+ +.|+++|..
T Consensus 1 gid~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~~----~~l~i~G~g- 75 (196)
T d2bfwa1 1 GIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQE----MRFIIIGKG- 75 (196)
T ss_dssp CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGG----EEEEEECCB-
T ss_pred CcChhhcCCCCCCchhHHHHHHHHHHhCCCCCCEEEEEcCCCccccCHHHHHHHHHhhhcccCCCC----eEEEEEeec-
Confidence 899999987766666677888999999866788899999997 589999999999999654 344 558888832
Q ss_pred CCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCCC---CCCC-CceEEE
Q 044635 385 RGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEP---SSPK-KSMLVV 460 (831)
Q Consensus 385 r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~---~~~~-~g~lVl 460 (831)
.+.++. .+..+... ++ .++++.+.++.+++..+|+.||++|+||..||+.. ++.. +.|+|+
T Consensus 76 ---~~~~~~---~~~~~~~~----~~-----~~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G~pvI~ 140 (196)
T d2bfwa1 76 ---DPELEG---WARSLEEK----HG-----NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIA 140 (196)
T ss_dssp ---CHHHHH---HHHHHHHH----CT-----TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEE
T ss_pred ---ccchhh---hhhhhhhc----cc-----eeEEeeeccccccchhccccccccccccccccccccchhhhhcCceeee
Confidence 133333 33333222 22 36677889999999999999999999999999821 1222 446666
Q ss_pred eccccccccc--CCCceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcc
Q 044635 461 SEFIGCSPSL--SGAIRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVST 512 (831)
Q Consensus 461 Se~~G~~~~l--~~allVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~ 512 (831)
|...|..+.+ ..|++++|.|+++++++|.++|.+..+.+....+..+++..+
T Consensus 141 ~~~~~~~e~i~~~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~~ 194 (196)
T d2bfwa1 141 SAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMS 194 (196)
T ss_dssp ESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCccceeecCCceeeECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 6665555555 358999999999999999999998876665544455554433
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=99.61 E-value=8.5e-16 Score=165.07 Aligned_cols=197 Identities=14% Similarity=0.133 Sum_probs=140.7
Q ss_pred EEEEeecccChHHHHHhhCCcchHHHHHHHHHHhc-cCCcEEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 044635 301 SIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFH-DQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQ 379 (831)
Q Consensus 301 ~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~~~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvq 379 (831)
++.++|+|||++.+..... + .....+++.++ +.++++++++||+.+.||+..+++|++++.+++|+.. ++.
T Consensus 160 ~i~vi~~gv~~~~~~~~~~-~---~~~~~~r~~~~~~~~~~~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~~~----~~i 231 (370)
T d2iw1a1 160 RFQILPPGIYPDRKYSEQI-P---NSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNT----LLF 231 (370)
T ss_dssp GEEECCCCCCGGGSGGGSC-T---THHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTE----EEE
T ss_pred eEEEEEeecccccccccCc-h---hhhhhhhhccCCCccceEEEEEeccccccchhhhcccccccccccccce----eee
Confidence 4567899999887653322 2 23456677777 6789999999999999999999999999988887654 555
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEEecCCCCHHHHHHHHHHcCEeEECCCccCCCC---CCCC-C
Q 044635 380 IANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGSEP---SSPK-K 455 (831)
Q Consensus 380 ig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~vvtS~~eGma~---~~~~-~ 455 (831)
++... .+ +++++++++.+.. ..++++ ++ .+++..+|+.||++|+||..|||.. +++. +
T Consensus 232 i~g~~---~~------~~~~~~~~~~~~~------~~v~~~-g~--~~~~~~~~~~adv~v~ps~~E~~~~~~~EAma~G 293 (370)
T d2iw1a1 232 VVGQD---KP------RKFEALAEKLGVR------SNVHFF-SG--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITAG 293 (370)
T ss_dssp EESSS---CC------HHHHHHHHHHTCG------GGEEEE-SC--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHT
T ss_pred ccccc---cc------ccccccccccccc------cccccc-cc--ccccccccccccccccccccccccceeeecccCC
Confidence 65321 11 2233444444322 135544 44 4579999999999999999999821 2222 4
Q ss_pred ceEEEeccccccccc---CCC-ceeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccCCHHHHHHHHHH
Q 044635 456 SMLVVSEFIGCSPSL---SGA-IRVNPWNIDAVSDAMDSALEMADQEKQLRHEKHYRYVSTHDVGYWARSFLQ 524 (831)
Q Consensus 456 g~lVlSe~~G~~~~l---~~a-llVnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 524 (831)
.|+|+|...|..+.+ .+| ++++|.|++++|++|.++|+. ++.++...++.++++.+++...|.+...+
T Consensus 294 ~PvI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~i~~ll~d-~~~~~~~~~~ar~~~~~~~~~~~~~~~~~ 365 (370)
T d2iw1a1 294 LPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQ-SPLRMAWAENARHYADTQDLYSLPEKAAD 365 (370)
T ss_dssp CCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHSCCSCHHHHHHH
T ss_pred eeEEEeCCCChHHHhcCCCceEEEcCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHhChhHHHHHHHH
Confidence 578888888877776 345 455899999999999999984 44555556778888988888888875544
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.37 E-value=2e-12 Score=124.43 Aligned_cols=136 Identities=18% Similarity=0.187 Sum_probs=100.8
Q ss_pred EEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEE
Q 044635 340 VMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVL 419 (831)
Q Consensus 340 ~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~ 419 (831)
..+|+|||+++.||+..+++|+.++ |+.+ |+++|..+ +++..+.+.+++.+. +. ..|++
T Consensus 13 ~~~l~iGrl~~~K~~~~~i~a~~~l----~~~~----l~ivg~~~--~~~~~~~~~~~~~~~--------~~---~~v~~ 71 (166)
T d2f9fa1 13 DFWLSVNRIYPEKRIELQLEVFKKL----QDEK----LYIVGWFS--KGDHAERYARKIMKI--------AP---DNVKF 71 (166)
T ss_dssp SCEEEECCSSGGGTHHHHHHHHHHC----TTSC----EEEEBCCC--TTSTHHHHHHHHHHH--------SC---TTEEE
T ss_pred CEEEEEecCccccCHHHHHHHHHHh----cCCe----EEEEEecc--cccchhhhhhhhccc--------cc---CcEEE
Confidence 5578999999999999999999765 5655 77777543 334444455544332 11 13666
Q ss_pred ecCCCCHHHHHHHHHHcCEeEECCCccCCCC---CC-CCCceEEEeccccccccc---CCCceeCCCCHHHHHHHHHHHh
Q 044635 420 IDEPLKFYERIAYYVVAECCLVTAVRDGSEP---SS-PKKSMLVVSEFIGCSPSL---SGAIRVNPWNIDAVSDAMDSAL 492 (831)
Q Consensus 420 ~~~~v~~~el~aly~~ADv~vvtS~~eGma~---~~-~~~g~lVlSe~~G~~~~l---~~allVnP~d~~~~A~ai~~aL 492 (831)
+ +.++.+++..+|+.||+++.||..||+.. ++ ..+.|+|+|...|+.+.+ .+|+.+++ |+++++++|.+++
T Consensus 72 ~-g~~~~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~~~g~pvi~s~~~~~~e~i~~~~~g~~~~~-d~~~~~~~i~~l~ 149 (166)
T d2f9fa1 72 L-GSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVNA-DVNEIIDAMKKVS 149 (166)
T ss_dssp E-ESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEECS-CHHHHHHHHHHHH
T ss_pred e-ecccccccccccccccccccccccccccccccccccccccceeecCCcceeeecCCcccccCCC-CHHHHHHHHHHHH
Confidence 4 68999999999999999999999999821 11 115688888888887766 34666665 8999999999999
Q ss_pred cCCHHH
Q 044635 493 EMADQE 498 (831)
Q Consensus 493 ~m~~~e 498 (831)
+.++..
T Consensus 150 ~~~~~~ 155 (166)
T d2f9fa1 150 KNPDKF 155 (166)
T ss_dssp HCTTTT
T ss_pred hCHHHH
Confidence 987543
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.29 E-value=4.3e-14 Score=139.65 Aligned_cols=74 Identities=9% Similarity=0.022 Sum_probs=59.6
Q ss_pred EeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEe-
Q 044635 734 KPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYL- 808 (831)
Q Consensus 734 ~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l- 808 (831)
.+...+|+...+.+++++ ++++++|+||||+.||++||+.|| ++|+|+.. +..|+|.+
T Consensus 124 ~~~~~~~~~~~~~~~~~~---~i~~~eviaiGDg~NDi~Ml~~Ag--------------~gIAmna~~~v~~~~~~~~~~ 186 (206)
T d1rkua_ 124 VGYQLRQKDPKRQSVIAF---KSLYYRVIAAGDSYNDTTMLSEAH--------------AGILFHAPENVIREFPQFPAV 186 (206)
T ss_dssp EEEECCSSSHHHHHHHHH---HHTTCEEEEEECSSTTHHHHHHSS--------------EEEEESCCHHHHHHCTTSCEE
T ss_pred ccccccchhhHHHHHHHh---cccccceEEecCCccCHHHHHhCC--------------ccEEECCCHHHHHhCCCceee
Confidence 344556777788888887 889999999999999999999998 57888653 46778864
Q ss_pred CChhHHHHHHHHHHhh
Q 044635 809 DDTVEIVRLMQGLACV 824 (831)
Q Consensus 809 ~d~~eV~~~L~~L~~~ 824 (831)
++.+|+.+.|.+..+-
T Consensus 187 ~~~~d~~~~~~~~~~~ 202 (206)
T d1rkua_ 187 HTYEDLKREFLKASSR 202 (206)
T ss_dssp CSHHHHHHHHHHHCSS
T ss_pred cCHHHHHHHHHHHhhC
Confidence 7899999988876553
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.94 E-value=7.6e-10 Score=108.60 Aligned_cols=71 Identities=20% Similarity=0.230 Sum_probs=57.4
Q ss_pred EEEeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC---CcccceEe
Q 044635 732 EVKPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK---PSKAKYYL 808 (831)
Q Consensus 732 EV~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~---~s~A~y~l 808 (831)
+....+..|..++..+++.+ +++++++++|||+.||++|++++|. +|+|+.. ++.|+|++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~iGDs~nDi~m~~~ag~--------------~va~na~~~lk~~Ad~vi 197 (210)
T d1j97a_ 135 GEVLKENAKGEILEKIAKIE---GINLEDTVAVGDGANDISMFKKAGL--------------KIAFCAKPILKEKADICI 197 (210)
T ss_dssp CSSCSTTHHHHHHHHHHHHH---TCCGGGEEEEESSGGGHHHHHHCSE--------------EEEESCCHHHHTTCSEEE
T ss_pred ccccccccccchhhhHHHHh---cccccceEEecCCcChHHHHHHCCC--------------CEEECCCHHHHHhCCEEE
Confidence 34456788899999999988 8999999999999999999999984 4556332 47899999
Q ss_pred C--ChhHHHHHHH
Q 044635 809 D--DTVEIVRLMQ 819 (831)
Q Consensus 809 ~--d~~eV~~~L~ 819 (831)
+ |.++|++.|+
T Consensus 198 ~~~d~~~vl~~lk 210 (210)
T d1j97a_ 198 EKRDLREILKYIK 210 (210)
T ss_dssp CSSCGGGGGGGCC
T ss_pred cCCCHHHHHHHhC
Confidence 7 5678887653
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.93 E-value=2.1e-09 Score=104.04 Aligned_cols=71 Identities=13% Similarity=0.105 Sum_probs=58.6
Q ss_pred CCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEeCC--
Q 044635 737 GVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLDD-- 810 (831)
Q Consensus 737 gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~d-- 810 (831)
..+|..+++++++++ ++++++|+++||+.||++||+.++ ++++++++ +..|+|++..
T Consensus 78 ~~~K~~~l~~~~~~~---~i~~~~v~~vGDd~nDl~~l~~~g--------------~siap~nA~~~vk~~A~~Vt~~~G 140 (177)
T d1k1ea_ 78 KLEKETACFDLMKQA---GVTAEQTAYIGDDSVDLPAFAACG--------------TSFAVADAPIYVKNAVDHVLSTHG 140 (177)
T ss_dssp CSCHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSS--------------EEEECTTSCHHHHTTSSEECSSCT
T ss_pred cccHHHHHHHHHHHh---cCCcceeEEecCCccHHHHHhhCC--------------eEEEcCCccHHHHHhCCEEeCCCC
Confidence 356999999999998 999999999999999999999998 57888886 5789999853
Q ss_pred -hhHHHHHHHHHHhh
Q 044635 811 -TVEIVRLMQGLACV 824 (831)
Q Consensus 811 -~~eV~~~L~~L~~~ 824 (831)
...|.++.+.+...
T Consensus 141 G~GavrE~~e~il~~ 155 (177)
T d1k1ea_ 141 GKGAFREMSDMILQA 155 (177)
T ss_dssp TTTHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHH
Confidence 33477777776554
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.55 E-value=1.9e-08 Score=100.42 Aligned_cols=70 Identities=11% Similarity=0.147 Sum_probs=52.1
Q ss_pred CHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC-----Ccccce-EeCChh
Q 044635 739 NKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK-----PSKAKY-YLDDTV 812 (831)
Q Consensus 739 nKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~-----~s~A~y-~l~d~~ 812 (831)
+|+..+..+++.+ +.+++.++++||+.||++|++.|+. ++++|.. .....+ ..+|-.
T Consensus 145 ~k~~~~~~~~~~~---~~~~~~~i~iGDs~~Dl~~a~~A~~--------------~~a~~~~~~~~~~~~~~~~~~~d~~ 207 (226)
T d2feaa1 145 QCGCCKPSVIHEL---SEPNQYIIMIGDSVTDVEAAKLSDL--------------CFARDYLLNECREQNLNHLPYQDFY 207 (226)
T ss_dssp CCSSCHHHHHHHH---CCTTCEEEEEECCGGGHHHHHTCSE--------------EEECHHHHHHHHHTTCCEECCSSHH
T ss_pred CCHHHHHHHHHHh---cCCCceEEEEeCchhhHHHHHHCCE--------------EEEecchHHHHHHcCCCeeecCCHH
Confidence 4556666677776 8899999999999999999999873 4556542 122233 357899
Q ss_pred HHHHHHHHHHhhh
Q 044635 813 EIVRLMQGLACVA 825 (831)
Q Consensus 813 eV~~~L~~L~~~~ 825 (831)
+++..|+.+.+..
T Consensus 208 ~i~~~l~~~~~~~ 220 (226)
T d2feaa1 208 EIRKEIENVKEVQ 220 (226)
T ss_dssp HHHHHHHTSHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999887654
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=98.50 E-value=4.7e-08 Score=99.57 Aligned_cols=54 Identities=22% Similarity=0.391 Sum_probs=42.5
Q ss_pred CceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEEC---CCCHhhHHHHhCC
Q 044635 572 TTRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVS---AKSRKTLAEWFSP 630 (831)
Q Consensus 572 ~~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~S---GR~~~~l~~~~~~ 630 (831)
++|.|+||+||||++ ....+ +.+.++|+.|.+ .|..|+++| +|+...+.+.+..
T Consensus 2 ~ik~VifDlDGTL~~---~~~~i-~~a~e~i~~l~~-~g~~~~~~TN~~~~~~~~~~~~l~~ 58 (250)
T d2c4na1 2 TIKNVICDIDGVLMH---DNVAV-PGAAEFLHGIMD-KGLPLVLLTNYPSQTGQDLANRFAT 58 (250)
T ss_dssp CCCEEEEECBTTTEE---TTEEC-TTHHHHHHHHHH-TTCCEEEEESCCSCCHHHHHHHHHH
T ss_pred CCCEEEEECCCeeEE---CCCcC-ccHHHHHHHHHH-CCCcEEEEeCCCCCCHHHHHHHHhh
Confidence 589999999999998 44444 467889999976 599999986 7888877766543
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=98.49 E-value=4.5e-07 Score=92.11 Aligned_cols=51 Identities=24% Similarity=0.297 Sum_probs=39.3
Q ss_pred ceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECC---CCHhhHHHHh
Q 044635 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSA---KSRKTLAEWF 628 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG---R~~~~l~~~~ 628 (831)
.+.++||+||||++ ....+ +.+.++|++|.+ .|..++++|+ |+...+.+.+
T Consensus 2 yk~v~fDlDGTL~~---~~~~i-~~a~~~i~~l~~-~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 2 YQGYLIDLDGTIYL---GKEPI-PAGKRFVERLQE-KDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp CCEEEECCBTTTEE---TTEEC-HHHHHHHHHHHH-TTCCEEEEECCCSSCHHHHHHHH
T ss_pred CCEEEEcCCCccEe---CCCcC-ccHHHHHHHHHH-CCCCEEEEeCCCCCCHHHHHHHH
Confidence 47999999999998 44444 788999999987 5999999875 5555554444
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=98.46 E-value=5.8e-07 Score=91.61 Aligned_cols=64 Identities=17% Similarity=0.222 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCC-chhHHHHHHcchhcCCCCCCCCCceEEEEe--CCC--------CcccceEe
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDD-RSDEDMFEVIISSMAGPSIAPRAEVFACTV--GRK--------PSKAKYYL 808 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~-~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~v--G~~--------~s~A~y~l 808 (831)
+....+.+++.+ |++++++++|||+ .+|+.|-+.+|. -+|-| |.. ...++|++
T Consensus 187 ~p~~~~~a~~~l---~~~~~~~lmVGD~~~~DI~ga~~aG~-------------~si~V~~G~~~~~~~~~~~~~PD~ii 250 (261)
T d1vjra_ 187 NPLVVDVISEKF---GVPKERMAMVGDRLYTDVKLGKNAGI-------------VSILVLTGETTPEDLERAETKPDFVF 250 (261)
T ss_dssp STHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHHHTC-------------EEEEESSSSCCHHHHHHCSSCCSEEE
T ss_pred cHHHHHHHHhhh---ccCchhcceecCChhHHHHHHHHCCC-------------cEEEECCCCCCHHHHhhcCCCCCEEE
Confidence 456667788888 9999999999999 579999999985 35555 421 23469999
Q ss_pred CChhHHHHHHH
Q 044635 809 DDTVEIVRLMQ 819 (831)
Q Consensus 809 ~d~~eV~~~L~ 819 (831)
++..|+.++|+
T Consensus 251 ~~l~eL~~~l~ 261 (261)
T d1vjra_ 251 KNLGELAKAVQ 261 (261)
T ss_dssp SSHHHHHHHHC
T ss_pred CCHHHHHHHhC
Confidence 99999998874
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.26 E-value=1.6e-06 Score=86.04 Aligned_cols=59 Identities=25% Similarity=0.303 Sum_probs=46.4
Q ss_pred CCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCC------cccceEeCC
Q 044635 737 GVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKP------SKAKYYLDD 810 (831)
Q Consensus 737 gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~------s~A~y~l~d 810 (831)
+..|+.+++.+.+.. +++.++++|||.||++|++.++ ++|++|..+ ..|+|++.+
T Consensus 151 ~~~K~~~v~~~~~~~-----~~~~~~~vGDs~~Di~~~~~ag--------------~~va~~~~~~~~~~~~~ad~~i~~ 211 (217)
T d1nnla_ 151 SGGKGKVIKLLKEKF-----HFKKIIMIGDGATDMEACPPAD--------------AFIGFGGNVIRQQVKDNAKWYITD 211 (217)
T ss_dssp TTHHHHHHHHHHHHH-----CCSCEEEEESSHHHHTTTTTSS--------------EEEEECSSCCCHHHHHHCSEEESC
T ss_pred cchHHHHHHHHHhcc-----CccccEEEEeCHhhHHHHHhCC--------------ceEEECCCHHHHHHHHhCCCEeCC
Confidence 445999999887654 5788999999999999999998 356776532 358899988
Q ss_pred hhHH
Q 044635 811 TVEI 814 (831)
Q Consensus 811 ~~eV 814 (831)
..|+
T Consensus 212 f~el 215 (217)
T d1nnla_ 212 FVEL 215 (217)
T ss_dssp GGGG
T ss_pred HHHh
Confidence 7765
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.89 E-value=1.6e-05 Score=78.45 Aligned_cols=57 Identities=14% Similarity=0.206 Sum_probs=46.5
Q ss_pred CCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC------CcccceEeCChhHHHHHHHHHH
Q 044635 755 EMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK------PSKAKYYLDDTVEIVRLMQGLA 822 (831)
Q Consensus 755 g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~------~s~A~y~l~d~~eV~~~L~~L~ 822 (831)
+++++++++|||+.+|+.+-+.+|.. .++|+.|.. +..|+|++++..++.++|+.|.
T Consensus 165 ~~~p~~~l~VGD~~~Di~aA~~aG~~-----------~i~v~~g~~~~~~l~~~~ad~vi~~~~el~~~l~~l~ 227 (228)
T d2hcfa1 165 NYSPSQIVIIGDTEHDIRCARELDAR-----------SIAVATGNFTMEELARHKPGTLFKNFAETDEVLASIL 227 (228)
T ss_dssp CCCGGGEEEEESSHHHHHHHHTTTCE-----------EEEECCSSSCHHHHHTTCCSEEESCSCCHHHHHHHHH
T ss_pred CCChhHheeecCChHHHHHHHHcCCE-----------EEEEcCCCCCHHHHhhCCCCEEECCHHHHHHHHHHHh
Confidence 68899999999999999999988742 245555652 4578999999999999999875
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.86 E-value=6.6e-05 Score=72.74 Aligned_cols=71 Identities=21% Similarity=0.254 Sum_probs=57.3
Q ss_pred eCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC------CcccceEe
Q 044635 735 PQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK------PSKAKYYL 808 (831)
Q Consensus 735 p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~------~s~A~y~l 808 (831)
+.+-.|...++.+++.+ |++++++++|||+.+|+.+-+.+|-. .++|..|.. ...|+|++
T Consensus 134 ~~~~~~p~~~~~~~~~~---~~~~~~~v~VGDs~~Di~aa~~aGi~-----------~i~v~~g~~~~~~l~~~~pd~vi 199 (210)
T d2ah5a1 134 PEAPHKADVIHQALQTH---QLAPEQAIIIGDTKFDMLGARETGIQ-----------KLAITWGFGEQADLLNYQPDYIA 199 (210)
T ss_dssp SSCCSHHHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEESSSSSCHHHHHTTCCSEEE
T ss_pred ccccccccccchhhhhh---hcccccceeecCCHHHHHHHHHcCCe-----------EEEEcCCCCCHHHHHhCCCCEEE
Confidence 34667888999999998 99999999999999999999999842 245555542 34588999
Q ss_pred CChhHHHHHHH
Q 044635 809 DDTVEIVRLMQ 819 (831)
Q Consensus 809 ~d~~eV~~~L~ 819 (831)
++..|+++.||
T Consensus 200 ~~l~el~~~le 210 (210)
T d2ah5a1 200 HKPLEVLAYFQ 210 (210)
T ss_dssp SSTTHHHHHTC
T ss_pred CCHHHHHHHhC
Confidence 99999988764
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=97.78 E-value=8.5e-05 Score=74.79 Aligned_cols=52 Identities=19% Similarity=0.288 Sum_probs=40.0
Q ss_pred ceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECC---CCHhhHHHHhC
Q 044635 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSA---KSRKTLAEWFS 629 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SG---R~~~~l~~~~~ 629 (831)
.|.|+||+||||++ ... +-+.+.++|+.|.+ .|..++++|+ |+.+.+.+.+.
T Consensus 2 yk~vlFDlDGTL~~---~~~-~i~~a~e~l~~l~~-~g~~~~~~TN~s~~~~~~~~~~l~ 56 (253)
T d1wvia_ 2 YKGYLIDLDGTIYK---GKD-RIPAGEDFVKRLQE-RQLPYILVTNNTTRTPEMVQEMLA 56 (253)
T ss_dssp CCEEEEECBTTTEE---TTE-ECHHHHHHHHHHHH-HTCCEEEEECCCSSCHHHHHHHHH
T ss_pred cCEEEEcCcCceEE---CCC-cCccHHHHHHHHHH-CCCCEEEEeCCCCCCHHHHHHHHH
Confidence 58999999999997 333 44888999999977 4899999874 56666666553
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.76 E-value=1.3e-05 Score=78.45 Aligned_cols=66 Identities=24% Similarity=0.304 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC------CcccceEeCChhH
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK------PSKAKYYLDDTVE 813 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~------~s~A~y~l~d~~e 813 (831)
|....+.+++.+ ++++++++.|||+.+|+.+-+.+|.. .+.|+-|.. ...|+|++++..+
T Consensus 153 ~p~~~~~~~~~~---~~~~~~~~~igD~~~Di~~A~~aG~~-----------~i~v~~g~~~~~~l~~~~~d~~v~~l~d 218 (224)
T d2hsza1 153 HPAPFYYLCGKF---GLYPKQILFVGDSQNDIFAAHSAGCA-----------VVGLTYGYNYNIPIAQSKPDWIFDDFAD 218 (224)
T ss_dssp SSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEESSSCSTTCCGGGGCCSEEESSGGG
T ss_pred cchhhHHHHHHh---hhhhhccchhcCcHHHHHHHHHcCCe-----------EEEEeCCCCCcchhhhcCCCEEECCHHH
Confidence 445556677777 89999999999999999999998742 234443321 3468899999999
Q ss_pred HHHHHH
Q 044635 814 IVRLMQ 819 (831)
Q Consensus 814 V~~~L~ 819 (831)
++++||
T Consensus 219 L~~iie 224 (224)
T d2hsza1 219 ILKITQ 224 (224)
T ss_dssp GGGGTC
T ss_pred HHHhhC
Confidence 887653
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=97.74 E-value=3.4e-05 Score=73.94 Aligned_cols=64 Identities=11% Similarity=0.097 Sum_probs=49.5
Q ss_pred HHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC-----CcccceEeCChhHHHHHH
Q 044635 744 AKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK-----PSKAKYYLDDTVEIVRLM 818 (831)
Q Consensus 744 l~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~-----~s~A~y~l~d~~eV~~~L 818 (831)
+..+++.+ ++++++++++||+.+|+.+=+.++-. .++.|.-|.. ...|+|++++..|+.+.|
T Consensus 114 ~~~~~~~~---~i~~~~s~mVGDs~~Di~aA~~Ag~~----------~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~~~i 180 (182)
T d2gmwa1 114 LLSARDYL---HIDMAASYMVGDKLEDMQAAVAANVG----------TKVLVRTGKPITPEAENAADWVLNSLADLPQAI 180 (182)
T ss_dssp HHHHHHHH---TBCGGGCEEEESSHHHHHHHHHTTCS----------EEEEESSSSCCCHHHHHHCSEEESCGGGHHHHH
T ss_pred ccchhhhc---ccccccccccCCCHHHHHHHHHhCCC----------cEEEECCCCCCCcccccCCCEEECCHHHHHHHh
Confidence 55666766 89999999999999999988888631 2345655643 246999999999999988
Q ss_pred HH
Q 044635 819 QG 820 (831)
Q Consensus 819 ~~ 820 (831)
++
T Consensus 181 kk 182 (182)
T d2gmwa1 181 KK 182 (182)
T ss_dssp HC
T ss_pred cC
Confidence 63
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.70 E-value=0.00015 Score=67.89 Aligned_cols=63 Identities=8% Similarity=-0.021 Sum_probs=44.9
Q ss_pred CHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCCcccceEeCChhHHHHHH
Q 044635 739 NKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDTVEIVRLM 818 (831)
Q Consensus 739 nKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~s~A~y~l~d~~eV~~~L 818 (831)
-|......+++.+ |++++++++|||+..|+..-+.+|- -+|.|... . ..+++.+.|
T Consensus 99 p~~~~~~~~~~~~---~~~~~~~l~igD~~~di~aA~~aG~-------------~~i~v~~G-------~-~~~~~~~~l 154 (164)
T d1u7pa_ 99 SKVTHFERLHHKT---GVPFSQMVFFDDENRNIIDVGRLGV-------------TCIHIRDG-------M-SLQTLTQGL 154 (164)
T ss_dssp CHHHHHHHHHHHH---CCCGGGEEEEESCHHHHHHHHTTTC-------------EEEECSSC-------C-CHHHHHHHH
T ss_pred CChHHHHHHHHHh---CCChHHEEEEcCCHHHHHHHHHcCC-------------EEEEECCC-------C-ChHHHHHHH
Confidence 3555677788887 9999999999999999999888874 34554321 1 355666666
Q ss_pred HHHHhhh
Q 044635 819 QGLACVA 825 (831)
Q Consensus 819 ~~L~~~~ 825 (831)
+.+++..
T Consensus 155 ~~f~~~~ 161 (164)
T d1u7pa_ 155 ETFAKAQ 161 (164)
T ss_dssp HHHHHHT
T ss_pred HHHHHhh
Confidence 6666543
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=97.50 E-value=3.2e-05 Score=75.10 Aligned_cols=64 Identities=20% Similarity=0.234 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEeCChhHHH
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYLDDTVEIV 815 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l~d~~eV~ 815 (831)
+....+.+++++ |++++++++|||+.+|+.+=+.+|.. .+.|..|.. ...+.|.+++..|++
T Consensus 139 ~p~~~~~~~~~~---~~~~~~~l~VgDs~~Di~~a~~aG~~-----------~i~v~~g~~~~~~~~~~~~~i~~l~dll 204 (207)
T d2hdoa1 139 DPLPLLTALEKV---NVAPQNALFIGDSVSDEQTAQAANVD-----------FGLAVWGMDPNADHQKVAHRFQKPLDIL 204 (207)
T ss_dssp SSHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTCE-----------EEEEGGGCCTTGGGSCCSEEESSGGGGG
T ss_pred hhhhhcccccce---eeeccceeEecCCHHHHHHHHHcCCe-----------EEEEecCCCChhHhhhcCcEeCCHHHHH
Confidence 456778888887 89999999999999999999998752 233444543 246788888888876
Q ss_pred HH
Q 044635 816 RL 817 (831)
Q Consensus 816 ~~ 817 (831)
++
T Consensus 205 ~l 206 (207)
T d2hdoa1 205 EL 206 (207)
T ss_dssp GG
T ss_pred hh
Confidence 53
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.40 E-value=0.00072 Score=61.07 Aligned_cols=56 Identities=14% Similarity=0.145 Sum_probs=45.3
Q ss_pred ceeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCC
Q 044635 573 TRAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPC 631 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~ 631 (831)
...+++|-+||++-. ....+-+++.++++.|.+ .|..++++||........+-..+
T Consensus 3 ~~~~~~d~~~~~~~g--~~D~lr~~a~~~I~~L~~-~Gi~v~ilTGD~~~~a~~ia~~l 58 (135)
T d2b8ea1 3 VTAVIFDKTGTLTKG--KPDTLKESAKPAVQELKR-MGIKVGMITGDNWRSAEAISREL 58 (135)
T ss_dssp CCEEEEECCCCCBCS--CCCCBCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHH
T ss_pred EEEEEECCceEEEEe--cCCCCCccHHHHHHHHHH-cCCEEEEEcCcchhhhhHHHhhh
Confidence 468999999999862 344567888899999876 59999999999999888776543
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=97.35 E-value=6.5e-05 Score=68.92 Aligned_cols=51 Identities=18% Similarity=0.278 Sum_probs=41.5
Q ss_pred hcCceeEEecCCCccCCCCCC---------CCCCCHHHHHHHHHHhhcCCCeEEEECCCCH
Q 044635 570 RTTTRAILLDYDGTLMPQASI---------DKSPNSKTIDILNSLCRDKNNMVFLVSAKSR 621 (831)
Q Consensus 570 ~s~~rli~~D~DGTLl~~~~~---------~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~ 621 (831)
.++.|.|+||+||||+..... ...|-+.++++|+.|.+ .|..|+++|||+.
T Consensus 4 ~~kpk~vifDiDgTL~~~~~~~~~~~~~~~~~~~~p~v~~~l~~l~~-~G~~Iii~T~R~~ 63 (149)
T d1ltqa1 4 PGKPKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYAL-MGYQIVVVSGRES 63 (149)
T ss_dssp TTSCEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHHH-TTCEEEEEECSCC
T ss_pred CCCCcEEEEEcCCCcEeCCCCCcCCccccccCccCHHHHHHHHHHHh-ccCeEEEEecCcH
Confidence 467899999999999874321 23567899999999986 6999999999973
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=97.29 E-value=0.00027 Score=69.09 Aligned_cols=68 Identities=15% Similarity=0.040 Sum_probs=46.1
Q ss_pred HHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCCcccce---EeCChhHHHHHH
Q 044635 742 LVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKY---YLDDTVEIVRLM 818 (831)
Q Consensus 742 ~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~s~A~y---~l~d~~eV~~~L 818 (831)
..+...++.+ +++++++++|||+.+|+.+=+.+|.. .+.+.-|.......+ .+.+..++.++|
T Consensus 133 ~ml~~a~~~~---~i~~~~~~~VGD~~~Di~aA~~AGi~-----------~i~v~~g~~~~~~~~~~~~~~~~~e~~dll 198 (209)
T d2o2xa1 133 GMLVEAGKRL---ALDLQRSLIVGDKLADMQAGKRAGLA-----------QGWLVDGEAAVQPGFAIRPLRDSSELGDLL 198 (209)
T ss_dssp HHHHHHHHHH---TCCGGGCEEEESSHHHHHHHHHTTCS-----------EEEEETCCCEEETTEEEEEESSHHHHHHHH
T ss_pred hhhhHhHHHh---CCCccceEEeCCCHHHHHHHHHCCCc-----------EEEEeCCCCcccCCccccCccchhHHHHHH
Confidence 3456666777 99999999999999999999998742 133445654333333 455666676666
Q ss_pred HHHHh
Q 044635 819 QGLAC 823 (831)
Q Consensus 819 ~~L~~ 823 (831)
+.+-.
T Consensus 199 ~~v~~ 203 (209)
T d2o2xa1 199 AAIET 203 (209)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65443
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.13 E-value=0.00074 Score=63.43 Aligned_cols=159 Identities=16% Similarity=0.202 Sum_probs=99.0
Q ss_pred eeEEecCCCccCCCCCCCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCCCCCceEEecCCEEEEeCCCceEE
Q 044635 574 RAILLDYDGTLMPQASIDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSPCENLGIAAEHGYFFRLRRDEEWE 653 (831)
Q Consensus 574 rli~~D~DGTLl~~~~~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~~~~~~liaenGa~i~~~~~~~w~ 653 (831)
-++++|-+|||+-.. . ..|-+++.++++.|.+ .|+.|+++||=+......+-..+ ++..+|= ..+
T Consensus 3 ~~~~~d~~~~~~~~~-~-Dp~R~~~~~~I~~l~~-~GI~v~miTGD~~~tA~~ia~~~---Gi~~~~~--------~v~- 67 (168)
T d1wpga2 3 SVICSDKTGTLTTNQ-L-DPPRKEVMGSIQLCRD-AGIRVIMITGDNKGTAIAICRRI---GIFGENE--------EVA- 67 (168)
T ss_dssp CEEEECCTTTTBCCC-E-CCBCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHT---TSSCTTC--------CCT-
T ss_pred EEEEECCccEEEEEe-c-CCCchhHHHHHHHHHH-CcCEEEEECCCCHHHHHHHHHHc---CCCCCcc--------ccc-
Confidence 368889999999632 1 3456788999999977 59999999999999888877654 2222210 000
Q ss_pred EcCCcCCccHHHHHHHHHHHHhccCCCeeEeeccceEEEeeccCCCccchHHHHHHHHHHHhHhcCCCeEEEEcCeEEEE
Q 044635 654 TCIPVADCGWKQIAEPVMKLYTETTDGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNLVEV 733 (831)
Q Consensus 654 ~~~~~~~~~w~~~v~~il~~~~e~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~v~v~~g~~~vEV 733 (831)
.....+.+ +.. . . ..+..+.++ .. .-+-++
T Consensus 68 ----~~~~~~~~-~~~---------------------------~----~---~~~~~~~~~----~~-------~v~ar~ 97 (168)
T d1wpga2 68 ----DRAYTGRE-FDD---------------------------L----P---LAEQREACR----RA-------CCFARV 97 (168)
T ss_dssp ----TTEEEHHH-HHH---------------------------S----C---HHHHHHHHH----HC-------CEEESC
T ss_pred ----cccccccc-cch---------------------------h----h---HHHHhhhhh----hh-------hhhhcc
Confidence 00000100 000 0 0 011111111 11 113345
Q ss_pred EeCCCCHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC----CcccceEe-
Q 044635 734 KPQGVNKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK----PSKAKYYL- 808 (831)
Q Consensus 734 ~p~gvnKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~----~s~A~y~l- 808 (831)
.|. .|...++.+.+. | ..|.++||+.||.++|+.+. +++++|+. +..|+.++
T Consensus 98 ~p~--~K~~lv~~l~~~----g---~~Va~vGDG~nD~~AL~~Ad--------------vGIa~~~gt~~a~~aAdivl~ 154 (168)
T d1wpga2 98 EPS--HKSKIVEYLQSY----D---EITAMTGDGVNDAPALKKAE--------------IGIAMGSGTAVAKTASEMVLA 154 (168)
T ss_dssp CHH--HHHHHHHHHHHT----T---CCEEEEECSGGGHHHHHHSS--------------EEEEETTSCHHHHHTCSEEET
T ss_pred chh--HHHHHHHHHHhc----c---cceeEEecCCCCHHHHHhCC--------------EEEEeccccHHHHHhCCEEEc
Confidence 555 488887777554 3 46999999999999999997 68888864 34688887
Q ss_pred -CChhHHHHHHHH
Q 044635 809 -DDTVEIVRLMQG 820 (831)
Q Consensus 809 -~d~~eV~~~L~~ 820 (831)
++...|++++++
T Consensus 155 ~~~l~~v~~~I~~ 167 (168)
T d1wpga2 155 DDNFSTIVAAVEE 167 (168)
T ss_dssp TCCTHHHHHHHHH
T ss_pred cCCHHHHHHHHHc
Confidence 357788777763
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=97.07 E-value=0.00039 Score=61.72 Aligned_cols=46 Identities=20% Similarity=0.363 Sum_probs=38.4
Q ss_pred eeEEecCCCccCCCCC---CCCCCCHHHHHHHHHHhhcCCCeEEEECCCC
Q 044635 574 RAILLDYDGTLMPQAS---IDKSPNSKTIDILNSLCRDKNNMVFLVSAKS 620 (831)
Q Consensus 574 rli~~D~DGTLl~~~~---~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~ 620 (831)
|-|++|+||||..... ....|-+.+++.|+.|.+ .|+.++|.|+|+
T Consensus 2 K~i~~DiDGTI~~~~~~~y~~~~P~~~~Ie~l~~l~~-~G~~Iii~TaR~ 50 (124)
T d1xpja_ 2 KKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQ-LGFEIVISTARN 50 (124)
T ss_dssp CEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHH-TTCEEEEEECTT
T ss_pred CEEEEeCCCCeECCCCCCcCccCcCHHHHHHHHHHHH-CCCEEEEEecCC
Confidence 5689999999987432 234688999999999977 599999999996
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=97.01 E-value=0.00031 Score=62.38 Aligned_cols=55 Identities=20% Similarity=0.332 Sum_probs=42.5
Q ss_pred eEEecCCCccCCCCC-CCCCCCHHHHHHHHHHhhcCCCeEEEECCCCHhh---HHHHhCC
Q 044635 575 AILLDYDGTLMPQAS-IDKSPNSKTIDILNSLCRDKNNMVFLVSAKSRKT---LAEWFSP 630 (831)
Q Consensus 575 li~~D~DGTLl~~~~-~~~~~s~~~~~~L~~L~~d~g~~V~I~SGR~~~~---l~~~~~~ 630 (831)
-|++|+||||..... ....|-+.+++.|++|.+ .|+.+++.|||+... ..+|+..
T Consensus 2 ti~vDiDGTl~~~~~~~~~kPi~~~Ie~l~~L~~-~G~~IIi~TaR~~~~~~~t~~wL~~ 60 (122)
T d2obba1 2 TIAVDFDGTIVEHRYPRIGEEIPFAVETLKLLQQ-EKHRLILWSVREGELLDEAIEWCRA 60 (122)
T ss_dssp EEEECCBTTTBCSCTTSCCCBCTTHHHHHHHHHH-TTCEEEECCSCCHHHHHHHHHHHHT
T ss_pred EEEEEcCCCcCCCCCCccccccHHHHHHHHHHHH-CCCeEEEEecCCCcchHHHHHHHHH
Confidence 379999999986432 234577899999999977 599999999998654 4556654
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=94.95 E-value=0.0089 Score=55.29 Aligned_cols=47 Identities=19% Similarity=0.338 Sum_probs=35.9
Q ss_pred ceeEEecCCCccCCCCCCC--------CCCCHHHHHHHHHHhhcCCCeEEEECCCC
Q 044635 573 TRAILLDYDGTLMPQASID--------KSPNSKTIDILNSLCRDKNNMVFLVSAKS 620 (831)
Q Consensus 573 ~rli~~D~DGTLl~~~~~~--------~~~s~~~~~~L~~L~~d~g~~V~I~SGR~ 620 (831)
+|+||||.||||....... -.+-|.+.++|+.|.+ .|..++++|..+
T Consensus 2 ~K~i~~D~DGtL~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~-~g~~l~i~TNq~ 56 (161)
T d2fpwa1 2 QKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQK-AGYKLVMITNQD 56 (161)
T ss_dssp CEEEEECCBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHHHH-TTEEEEEEEECT
T ss_pred CcEEEEeCCCCeEeeCCCCCccCCHHHceECccHHHHHHHHHH-cCCceeeecccc
Confidence 6899999999999743211 1345789999999987 599999998653
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=94.79 E-value=0.0057 Score=64.90 Aligned_cols=58 Identities=22% Similarity=0.208 Sum_probs=48.4
Q ss_pred CCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCC---------cccceEeCChhHHHHHHHHHHh
Q 044635 755 EMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKP---------SKAKYYLDDTVEIVRLMQGLAC 823 (831)
Q Consensus 755 g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~---------s~A~y~l~d~~eV~~~L~~L~~ 823 (831)
+..++.|+++||+.||.+|.+.++.. .++|++|... ..|+|++++..++.++|..|.+
T Consensus 312 ~~~~~~~~~vGD~~~D~~aak~Ag~~-----------~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el~~il~~l~~ 378 (380)
T d1qyia_ 312 IVNKDDVFIVGDSLADLLSAQKIGAT-----------FIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLDNLLE 378 (380)
T ss_dssp CSCTTTEEEEESSHHHHHHHHHHTCE-----------EEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHHSCTTT
T ss_pred CCCCCeEEEECCCHHHHHHHHHCCCC-----------EEEEecCCCCcccHHHHHhCCCCEEECCHHHHHHHHHHHHh
Confidence 78899999999999999999999742 3678888542 2699999999999999877654
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=93.96 E-value=0.026 Score=53.35 Aligned_cols=65 Identities=14% Similarity=0.128 Sum_probs=54.6
Q ss_pred CHHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCCCcccceEeCChhHHHHHH
Q 044635 739 NKGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRKPSKAKYYLDDTVEIVRLM 818 (831)
Q Consensus 739 nKG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~~s~A~y~l~d~~eV~~~L 818 (831)
.|....+.+++.+ |++|+++++|||+.+|+.+-+.+|. -+|.+......++|.+++..++.++|
T Consensus 138 p~~~~~~~~~~~~---~~~p~~~l~VgD~~~Di~~A~~~G~-------------~~i~v~~~~~~~~~~~~~~~dl~~l~ 201 (204)
T d2go7a1 138 PSPEAATYLLDKY---QLNSDNTYYIGDRTLDVEFAQNSGI-------------QSINFLESTYEGNHRIQALADISRIF 201 (204)
T ss_dssp TSSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHHTC-------------EEEESSCCSCTTEEECSSTTHHHHHT
T ss_pred hhHHHHHHHHHHh---CCCCceEEEEeCCHHHHHHHHHcCC-------------eEEEEcCCCCCcCeecCCHHHHHHHh
Confidence 3678889999988 9999999999999999999999984 36777666678899999888887765
Q ss_pred H
Q 044635 819 Q 819 (831)
Q Consensus 819 ~ 819 (831)
+
T Consensus 202 ~ 202 (204)
T d2go7a1 202 E 202 (204)
T ss_dssp S
T ss_pred c
Confidence 3
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=93.27 E-value=0.091 Score=49.89 Aligned_cols=70 Identities=16% Similarity=0.104 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC--C--------cccceEeC
Q 044635 740 KGLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK--P--------SKAKYYLD 809 (831)
Q Consensus 740 KG~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~--~--------s~A~y~l~ 809 (831)
+.......++.+ |++++++++|||+.+|+.+=+.+|.. .++|+-|.. + ..|+++++
T Consensus 143 ~~~~~~~~~~~l---~~~p~~~l~vgDs~~dv~aA~~aG~~-----------~i~v~~~~~~~~~~~~~l~~~~ad~vi~ 208 (222)
T d2fdra1 143 KPDIFLHGAAQF---GVSPDRVVVVEDSVHGIHGARAAGMR-----------VIGFTGASHTYPSHADRLTDAGAETVIS 208 (222)
T ss_dssp SSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHTTCE-----------EEEECCSTTCCTTHHHHHHHHTCSEEES
T ss_pred CHHHHHHHHHhh---CCCCceEEEEcCCHHHHHHHHHcCCE-----------EEEEccCCCCCcchHHHHHhCCCCEEEC
Confidence 346778888888 99999999999999999999888742 245554532 1 23889999
Q ss_pred ChhHHHHHHHHHHh
Q 044635 810 DTVEIVRLMQGLAC 823 (831)
Q Consensus 810 d~~eV~~~L~~L~~ 823 (831)
+..++..+|..|++
T Consensus 209 ~l~eL~~ll~~l~~ 222 (222)
T d2fdra1 209 RMQDLPAVIAAMAE 222 (222)
T ss_dssp CGGGHHHHHHHHTC
T ss_pred CHHHHHHHHHHhcC
Confidence 99999999999874
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=92.68 E-value=0.037 Score=52.53 Aligned_cols=49 Identities=16% Similarity=0.229 Sum_probs=36.1
Q ss_pred hcCceeEEecCCCccCCCCCCCC---------CCCHHHHHHHHHHhhcCCCeEEEECCC
Q 044635 570 RTTTRAILLDYDGTLMPQASIDK---------SPNSKTIDILNSLCRDKNNMVFLVSAK 619 (831)
Q Consensus 570 ~s~~rli~~D~DGTLl~~~~~~~---------~~s~~~~~~L~~L~~d~g~~V~I~SGR 619 (831)
+.+.|+++||.||||....+... -+.+.+.++|+.|.++ |..++|+|--
T Consensus 18 ~~~~Kia~fDrDGtLik~~~~~~~~~~~~d~~~l~~~v~~~i~~L~~~-gy~iiIvTNQ 75 (195)
T d1yj5a1 18 KPQGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAE-GYKLVIFTNQ 75 (195)
T ss_dssp CCCSCEEEECSBTTTEECSSSCSSCSSTTCCEESCTTHHHHHHHHHHH-TCEEEEEEEC
T ss_pred CCcCcEEEEECCCceEeeCCCCcCCCChhhceeccCCHHHHHHHHHhC-CcEEEEecCc
Confidence 34678999999999975322111 1358899999999874 8999999864
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=92.62 E-value=0.033 Score=53.27 Aligned_cols=63 Identities=17% Similarity=0.285 Sum_probs=49.4
Q ss_pred cCCHHHHHHHHHhcCceeEEecCCCccCCCCC-----------C--------------------CCCCCHHHHHHHHHHh
Q 044635 558 KLSMEHIVSAYKRTTTRAILLDYDGTLMPQAS-----------I--------------------DKSPNSKTIDILNSLC 606 (831)
Q Consensus 558 ~l~~~~~~~~y~~s~~rli~~D~DGTLl~~~~-----------~--------------------~~~~s~~~~~~L~~L~ 606 (831)
=.+++++.+.++..+...|+||+|-|+++..+ . ...|-+.+++.++.+.
T Consensus 20 w~~~~~i~~~~~g~~P~AIifDIDETvLdnspy~~~~~~~~~~~~~~y~~~~~~W~~~~~~~~~~A~p~pga~~fl~~~~ 99 (209)
T d2b82a1 20 WVSVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHV 99 (209)
T ss_dssp EECHHHHHHHTTTCCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHH
T ss_pred eEEHHHHHHhcCCCCCceEEEcchhhhhcCcHHHHhhhhhcCcCcccccCCCcchHHHhcccccccCcchhHHHHHHHHH
Confidence 35678899998887778999999999998421 0 0124467899999987
Q ss_pred hcCCCeEEEECCCCH
Q 044635 607 RDKNNMVFLVSAKSR 621 (831)
Q Consensus 607 ~d~g~~V~I~SGR~~ 621 (831)
+ .|..|+.+|||+.
T Consensus 100 ~-~Gv~IfyVTnR~~ 113 (209)
T d2b82a1 100 R-RGDAIFFVTGRSP 113 (209)
T ss_dssp H-HTCEEEEEECSCC
T ss_pred H-cCCeEEEEeCCch
Confidence 7 5999999999984
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=92.53 E-value=0.13 Score=49.96 Aligned_cols=65 Identities=14% Similarity=0.153 Sum_probs=49.9
Q ss_pred HHHHHHHHhhhcCC-CcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC---------------------
Q 044635 743 VAKRLLSTMQEREM-LPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK--------------------- 800 (831)
Q Consensus 743 al~~Ll~~l~~~g~-~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~--------------------- 800 (831)
.....++.+ |+ +++.+++|||+.+|+.+=+.+|.. .++|+-|..
T Consensus 161 ~~~~~~~~l---~~~p~~~~v~VgDs~~Di~aA~~aG~~-----------ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~ 226 (257)
T d1swva_ 161 MCYKNAMEL---GVYPMNHMIKVGDTVSDMKEGRNAGMW-----------TVGVILGSSELGLTEEEVENMDSVELREKI 226 (257)
T ss_dssp HHHHHHHHH---TCCSGGGEEEEESSHHHHHHHHHTTSE-----------EEEECTTCTTTCCCHHHHHHSCHHHHHHHH
T ss_pred HHHHHHHHh---CCCCcceEEEEeCChhhHHHHHHCCCE-----------EEEEccCCCCCCCCHHHHhhCCHHHHHHHH
Confidence 556677777 87 569999999999999999998852 245555632
Q ss_pred --------CcccceEeCChhHHHHHHHHH
Q 044635 801 --------PSKAKYYLDDTVEIVRLMQGL 821 (831)
Q Consensus 801 --------~s~A~y~l~d~~eV~~~L~~L 821 (831)
.+.|+|++++..|+..+|+.+
T Consensus 227 ~~~~~~l~~~gad~vi~~l~eL~~ii~~~ 255 (257)
T d1swva_ 227 EVVRNRFVENGAHFTIETMQELESVMEHI 255 (257)
T ss_dssp HHHHHHHHHTTCSEEESSGGGHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEECCHHHHHHHHHHH
Confidence 123899999999999998875
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=92.28 E-value=0.18 Score=48.57 Aligned_cols=73 Identities=15% Similarity=0.131 Sum_probs=55.7
Q ss_pred CCCH--HHHHHHHHHHhhhcCCCcccEEEEcCCc-hhHHHHHHcchhcCCCCCCCCCceEEEEeCC------CCcccceE
Q 044635 737 GVNK--GLVAKRLLSTMQEREMLPDFVLCVGDDR-SDEDMFEVIISSMAGPSIAPRAEVFACTVGR------KPSKAKYY 807 (831)
Q Consensus 737 gvnK--G~al~~Ll~~l~~~g~~~d~vla~GD~~-NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~------~~s~A~y~ 807 (831)
+..| ....+.+++.+ |++++++++|||+. +|+.+-+.+|.. .+.+..+. ...+++|+
T Consensus 161 ~~~KP~p~~~~~~~~~~---~~~~~~~l~iGD~~~~Di~~A~~~G~~-----------~~~~~~~~~~~~~~~~~~p~~~ 226 (247)
T d2gfha1 161 KEEKPAPSIFYHCCDLL---GVQPGDCVMVGDTLETDIQGGLNAGLK-----------ATVWINKSGRVPLTSSPMPHYM 226 (247)
T ss_dssp SSCTTCHHHHHHHHHHH---TCCGGGEEEEESCTTTHHHHHHHTTCS-----------EEEEECTTCCCCSSCCCCCSEE
T ss_pred ccchhhhhhHHHHHHHh---hcCHHhcceeccChHhHHHHHHHcCCe-----------EEEEECCCCCCcccccCCCCEE
Confidence 5556 67888899988 99999999999995 899999998852 01112121 13568899
Q ss_pred eCChhHHHHHHHHHHh
Q 044635 808 LDDTVEIVRLMQGLAC 823 (831)
Q Consensus 808 l~d~~eV~~~L~~L~~ 823 (831)
+++..++.++|+.+-.
T Consensus 227 i~~l~eL~~ll~~i~~ 242 (247)
T d2gfha1 227 VSSVLELPALLQSIDC 242 (247)
T ss_dssp ESSGGGHHHHHHHHTT
T ss_pred ECCHHHHHHHHHHHhh
Confidence 9999999999998743
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=92.25 E-value=0.13 Score=49.32 Aligned_cols=65 Identities=15% Similarity=0.182 Sum_probs=52.3
Q ss_pred HHHHHHHHHHhhhcCCCcccEEEEcCC-chhHHHHHHcchhcCCCCCCCCCceEEEEeCC--C----CcccceEeCChhH
Q 044635 741 GLVAKRLLSTMQEREMLPDFVLCVGDD-RSDEDMFEVIISSMAGPSIAPRAEVFACTVGR--K----PSKAKYYLDDTVE 813 (831)
Q Consensus 741 G~al~~Ll~~l~~~g~~~d~vla~GD~-~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~--~----~s~A~y~l~d~~e 813 (831)
....+.+++.+ |+++++++.|||+ .+|+.+-+.+|. -+|.+.. . ...++|++.+..+
T Consensus 158 ~~~~~~~~~~l---~~~p~~~l~vgD~~~~Di~~A~~~G~-------------~~v~v~~~~~~~~~~~~~d~~i~~l~e 221 (230)
T d1x42a1 158 PRIFELALKKA---GVKGEEAVYVGDNPVKDCGGSKNLGM-------------TSILLDRKGEKREFWDKCDFIVSDLRE 221 (230)
T ss_dssp HHHHHHHHHHH---TCCGGGEEEEESCTTTTHHHHHTTTC-------------EEEEECTTSCCGGGGGGSSEEESSTTH
T ss_pred hHHHHHHHhhh---cccccccceeecCcHhHHHHHHHcCC-------------EEEEECCCCCCcccccCCCEEECCHHH
Confidence 57788888888 9999999999998 589999888874 2444421 1 3578999999999
Q ss_pred HHHHHHHH
Q 044635 814 IVRLMQGL 821 (831)
Q Consensus 814 V~~~L~~L 821 (831)
+.++|++|
T Consensus 222 l~~~l~~l 229 (230)
T d1x42a1 222 VIKIVDEL 229 (230)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHc
Confidence 99999976
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=91.93 E-value=0.16 Score=48.63 Aligned_cols=65 Identities=17% Similarity=0.139 Sum_probs=51.7
Q ss_pred HHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCC----------------------
Q 044635 742 LVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGR---------------------- 799 (831)
Q Consensus 742 ~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~---------------------- 799 (831)
...++.++.+ |++|++++.|||+.+|+..=+.+|. .||-|-.
T Consensus 151 ~~f~~a~~~l---g~~p~e~l~VgD~~~di~~A~~aG~-------------~tv~v~r~~~~~~~~~~~~~~~~~~~~~~ 214 (245)
T d1qq5a_ 151 DSYALVEEVL---GVTPAEVLFVSSNGFDVGGAKNFGF-------------SVARVARLSQEALARELVSGTIAPLTMFK 214 (245)
T ss_dssp HHHHHHHHHH---CCCGGGEEEEESCHHHHHHHHHHTC-------------EEEEECCSCHHHHHHHTTSSSCCHHHHHH
T ss_pred HHHHHHHHHh---CCChhhEEEEeCCHHHHHHHHHcCC-------------eEEEEcCCCcccccccccccccccchhhh
Confidence 4667888888 9999999999999999888777774 3555411
Q ss_pred --------CCcccceEeCChhHHHHHHHHHH
Q 044635 800 --------KPSKAKYYLDDTVEIVRLMQGLA 822 (831)
Q Consensus 800 --------~~s~A~y~l~d~~eV~~~L~~L~ 822 (831)
....++|++++..|+.++|+.|+
T Consensus 215 ~~~~~~~~~~~~pd~~i~~l~el~~lv~~~~ 245 (245)
T d1qq5a_ 215 ALRMREETYAEAPDFVVPALGDLPRLVRGMA 245 (245)
T ss_dssp HHHSSCCTTSCCCSEEESSGGGHHHHHHHHC
T ss_pred hhhhhhhhccCCCCEEECCHHHHHHHHHhhC
Confidence 12468899999999999999875
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=91.61 E-value=1.3 Score=45.75 Aligned_cols=249 Identities=16% Similarity=0.187 Sum_probs=139.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCEEEEeCccccchHHHHHhhcCCCeEEEEEeccCCChHHhhcCCChHHHHHHHh--cCCeE
Q 044635 184 VSVNKIFADRIMEVINPEDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREEILRALL--NSDLI 261 (831)
Q Consensus 184 ~~vN~~fa~~i~~~~~~~~d~vwvhDyhL~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~eil~~ll--~~dli 261 (831)
-.+-..+++. .+..+| |+|.||.=-.-.++..+-....++||+.. |-=-.|.++.. |..+++.|-.. .||+-
T Consensus 74 ~~~~~~~~~~-l~~~kP--D~vlv~GDr~e~la~a~aa~~~~ipi~Hi-egG~rsg~~~~--~~~de~~R~~iskls~~h 147 (373)
T d1v4va_ 74 ARILPQAARA-LKEMGA--DYVLVHGDTLTTFAVAWAAFLEGIPVGHV-EAGLRSGNLKE--PFPEEANRRLTDVLTDLD 147 (373)
T ss_dssp HHHHHHHHHH-HHHTTC--SEEEEESSCHHHHHHHHHHHHTTCCEEEE-TCCCCCSCTTS--STTHHHHHHHHHHHCSEE
T ss_pred HHHHHHHhhh-hhhcCc--ccccccccCccchhHHHHHHHhhhhheee-ccccccccccc--Ccchhhhhhhhcccccee
Confidence 3344445443 444567 89999988888888777677778888743 11111222222 33455444321 36766
Q ss_pred eecCHHhHHHHHHHHHHHhCCeecccCceeeEEEcCEEEEEEEeecccChHHHHHhhCCcchHHHHHHHH-HHhc-cCCc
Q 044635 262 GFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELI-KQFH-DQGK 339 (831)
Q Consensus 262 gf~t~~~~~~Fl~~~~r~l~~~~~~~~~~~~~~~~gr~~~i~v~P~GId~~~~~~~~~~~~~~~~~~~lr-~~~~-~~~~ 339 (831)
---|..+.++.++ +|.+ ..+ +..-|. +++|- +.. ...+. .... ..++
T Consensus 148 f~~t~~~~~~L~~-----~Ge~--~~~----I~~vG~--------p~~D~--i~~----------~~~~~~~~~~~~~~~ 196 (373)
T d1v4va_ 148 FAPTPLAKANLLK-----EGKR--EEG----ILVTGQ--------TGVDA--VLL----------AAKLGRLPEGLPEGP 196 (373)
T ss_dssp EESSHHHHHHHHT-----TTCC--GGG----EEECCC--------HHHHH--HHH----------HHHHCCCCTTCCSSC
T ss_pred eecchhhhhhhhh-----hccc--ccc----eeeccc--------chhhH--HHh----------hhhhccccccccccc
Confidence 6667777777664 2322 111 222121 23332 110 01111 1111 3567
Q ss_pred EEEEeccCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccCCCCCCccEEE
Q 044635 340 VMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVL 419 (831)
Q Consensus 340 ~iil~VdRld~~KGi~~~l~A~~~lL~~~P~~~~~vvLvqig~p~r~~~~~~~~l~~~i~~lv~~IN~~~g~~~~~pv~~ 419 (831)
.+++..-|....+.....+.++..+.+..++.. ++....+ . +. .+..+.+ .... ...+.+
T Consensus 197 ~~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~----~i~p~~~---~-~~---~~~~~~~----~~~~-----~~n~~~ 256 (373)
T d1v4va_ 197 YVTVTMHRRENWPLLSDLAQALKRVAEAFPHLT----FVYPVHL---N-PV---VREAVFP----VLKG-----VRNFVL 256 (373)
T ss_dssp EEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSE----EEEECCS---C-HH---HHHHHHH----HHTT-----CTTEEE
T ss_pred ceeEEeccccccchHHHHHHHHHHHhhhcccce----eeeeecc---c-cc---chhhhhh----hhcc-----ccccee
Confidence 888999999998999999999999988887653 4433322 1 11 1111111 1111 224665
Q ss_pred ecCCCCHHHHHHHHHHcCEeEECC---CccCCCCCCCCCceEEEecccccccc-c-CCCceeCCCCHHHHHHHHHHHhcC
Q 044635 420 IDEPLKFYERIAYYVVAECCLVTA---VRDGSEPSSPKKSMLVVSEFIGCSPS-L-SGAIRVNPWNIDAVSDAMDSALEM 494 (831)
Q Consensus 420 ~~~~v~~~el~aly~~ADv~vvtS---~~eGma~~~~~~g~lVlSe~~G~~~~-l-~~allVnP~d~~~~A~ai~~aL~m 494 (831)
+ .++++.++..+++.|++++=.| ..|.... +.|+|.-...|--++ + .+...+-+.|.+++..+|..+|..
T Consensus 257 ~-~~l~~~~~l~ll~~s~~vignSssgi~Ea~~l----g~P~Inir~~~eRqeg~~~g~nvlv~~d~~~I~~~i~~~l~~ 331 (373)
T d1v4va_ 257 L-DPLEYGSMAALMRASLLLVTDSGGLQEEGAAL----GVPVVVLRNVTERPEGLKAGILKLAGTDPEGVYRVVKGLLEN 331 (373)
T ss_dssp E-CCCCHHHHHHHHHTEEEEEESCHHHHHHHHHT----TCCEEECSSSCSCHHHHHHTSEEECCSCHHHHHHHHHHHHTC
T ss_pred e-ccchHHHHHHHhhhceeEecccchhhhcchhh----cCcEEEeCCCccCHHHHhcCeeEEcCCCHHHHHHHHHHHHcC
Confidence 4 4899999999999999988666 2343333 335554444443332 2 233333456999999999999973
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=90.85 E-value=0.09 Score=49.74 Aligned_cols=54 Identities=11% Similarity=-0.043 Sum_probs=41.4
Q ss_pred HHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC-------CcccceEeCChhHH
Q 044635 745 KRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK-------PSKAKYYLDDTVEI 814 (831)
Q Consensus 745 ~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~-------~s~A~y~l~d~~eV 814 (831)
+.+++.+ |++++++++|||+.+|+.+-+.+|. .+|.|... ...|++.+++..|+
T Consensus 151 ~~~~~~l---~~~~~~~l~igD~~~di~aA~~~G~-------------~~i~v~~~~~~~~~~~~~a~~~i~~l~el 211 (218)
T d1te2a_ 151 LDCAAKL---GVDPLTCVALEDSVNGMIASKAARM-------------RSIVVPAPEAQNDPRFVLANVKLSSLTEL 211 (218)
T ss_dssp HHHHHHH---TSCGGGEEEEESSHHHHHHHHHTTC-------------EEEECCCTTTTTCGGGGGSSEECSCGGGC
T ss_pred HHHHHHc---CCCchhcEEEeeCHHHHHHHHHcCC-------------EEEEECCCCCccchhhcCCCEEECChhhC
Confidence 3555666 8999999999999999999999984 34555321 25788899988775
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=90.43 E-value=0.12 Score=47.83 Aligned_cols=22 Identities=18% Similarity=0.009 Sum_probs=18.7
Q ss_pred cccEEEEcCCchhHHHHHHcch
Q 044635 758 PDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 758 ~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
++.+++|||+.+|+.+-+.+|-
T Consensus 149 ~~~~l~vgDs~~Di~aA~~aG~ 170 (187)
T d2fi1a1 149 ISSGLVIGDRPIDIEAGQAAGL 170 (187)
T ss_dssp CSSEEEEESSHHHHHHHHHTTC
T ss_pred CCCeEEEeCCHHHHHHHHHcCC
Confidence 3569999999999999998873
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=89.10 E-value=0.23 Score=48.19 Aligned_cols=32 Identities=9% Similarity=0.070 Sum_probs=23.9
Q ss_pred HHHHHHHHhhcCCCeEEEECCCCHhhHHHHhCC
Q 044635 598 TIDILNSLCRDKNNMVFLVSAKSRKTLAEWFSP 630 (831)
Q Consensus 598 ~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 630 (831)
+.++|+.|.+ .|..++|+||.+...+...+..
T Consensus 104 ~~~~L~~Lk~-~g~~i~i~Tn~~~~~~~~~l~~ 135 (257)
T d1swva_ 104 VKEVIASLRE-RGIKIGSTTGYTREMMDIVAKE 135 (257)
T ss_dssp HHHHHHHHHH-TTCEEEEBCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHh-cccceeecCCCchhhHHHHHHH
Confidence 4456777766 4899999999998777666553
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=88.16 E-value=0.33 Score=45.52 Aligned_cols=66 Identities=14% Similarity=0.061 Sum_probs=49.9
Q ss_pred CCCCHH--HHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeC--C-----CCcccce
Q 044635 736 QGVNKG--LVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVG--R-----KPSKAKY 806 (831)
Q Consensus 736 ~gvnKG--~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG--~-----~~s~A~y 806 (831)
.+..|- .+.+.+++++ |++|++++.|||+.+|+..=+.+|. -+|.|. . ....|+|
T Consensus 145 ~~~~KP~p~~~~~~~~~~---g~~p~e~l~VgD~~~Di~~A~~aG~-------------~~v~v~r~~~~~~~~~~~~d~ 208 (220)
T d1zrna_ 145 VQVYKPDNRVYELAEQAL---GLDRSAILFVASNAWDATGARYFGF-------------PTCWINRTGNVFEEMGQTPDW 208 (220)
T ss_dssp GTCCTTSHHHHHHHHHHH---TSCGGGEEEEESCHHHHHHHHHHTC-------------CEEEECTTCCCCCSSSCCCSE
T ss_pred eeccccHHHHHHHHHHHh---CCCCceEEEEecChHhHHHHHHcCC-------------EEEEEcCCCCCcccccCCCCE
Confidence 345554 5778888888 9999999999999999998888874 255552 1 1456889
Q ss_pred EeCChhHHHHH
Q 044635 807 YLDDTVEIVRL 817 (831)
Q Consensus 807 ~l~d~~eV~~~ 817 (831)
.+++..++.++
T Consensus 209 ~i~~l~el~~l 219 (220)
T d1zrna_ 209 EVTSLRAVVEL 219 (220)
T ss_dssp EESSHHHHHTT
T ss_pred EECCHHHHHhh
Confidence 99988877653
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=88.05 E-value=0.31 Score=46.26 Aligned_cols=33 Identities=9% Similarity=0.097 Sum_probs=27.6
Q ss_pred HHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcch
Q 044635 744 AKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIIS 779 (831)
Q Consensus 744 l~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~ 779 (831)
.+..++++ |++|+++++|||+.+|+..=+.+|.
T Consensus 190 ~~~~~~~~---~~~p~~~l~vgD~~~dv~aA~~aG~ 222 (253)
T d1zs9a1 190 YRKIADSI---GCSTNNILFLTDVTREASAAEEADV 222 (253)
T ss_dssp HHHHHHHH---TSCGGGEEEEESCHHHHHHHHHTTC
T ss_pred HHHHHHHh---CCCcCcEEEEeCCHHHHHHHHHcCC
Confidence 34444666 8999999999999999999999985
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=87.04 E-value=0.2 Score=46.68 Aligned_cols=33 Identities=9% Similarity=0.056 Sum_probs=24.7
Q ss_pred CHHHHHHHHHHhhcCCCeEEEECCCCHhhHHHHhC
Q 044635 595 NSKTIDILNSLCRDKNNMVFLVSAKSRKTLAEWFS 629 (831)
Q Consensus 595 s~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~ 629 (831)
-|.+.++|+.|.+ .|..++|+|+++... ...+.
T Consensus 84 ~pgv~~~L~~L~~-~g~~~~v~Sn~~~~~-~~~l~ 116 (204)
T d2go7a1 84 MPGAREVLAWADE-SGIQQFIYTHKGNNA-FTILK 116 (204)
T ss_dssp CTTHHHHHHHHHH-TTCEEEEECSSCTHH-HHHHH
T ss_pred cchHHhhhhcccc-cccchhhhcccchhh-hhhhh
Confidence 3677889999976 589999999987643 44444
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=86.96 E-value=0.48 Score=44.36 Aligned_cols=15 Identities=33% Similarity=0.532 Sum_probs=13.6
Q ss_pred CceeEEecCCCccCC
Q 044635 572 TTRAILLDYDGTLMP 586 (831)
Q Consensus 572 ~~rli~~D~DGTLl~ 586 (831)
+++.++||+||||++
T Consensus 2 ~i~a~iFD~DGTL~d 16 (218)
T d1te2a_ 2 QILAAIFDMDGLLID 16 (218)
T ss_dssp CCCEEEECCBTTTBC
T ss_pred cceEEEECCCCcccC
Confidence 578899999999997
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=83.88 E-value=0.74 Score=43.02 Aligned_cols=64 Identities=11% Similarity=0.104 Sum_probs=45.6
Q ss_pred HHHHHHHHHHhhhcCCCcccEEEEcCCchhHHHHHHcchhcCCCCCCCCCceEEEEeCCC--CcccceEeCChhH-HHHH
Q 044635 741 GLVAKRLLSTMQEREMLPDFVLCVGDDRSDEDMFEVIISSMAGPSIAPRAEVFACTVGRK--PSKAKYYLDDTVE-IVRL 817 (831)
Q Consensus 741 G~al~~Ll~~l~~~g~~~d~vla~GD~~NDe~Mf~~a~~~~~~~~~~~~~~~~~v~vG~~--~s~A~y~l~d~~e-V~~~ 817 (831)
-...+.+++.+ |+++++++.|||+.+|+.+-+.+|. -+|.|+.. ...+...+++..+ .++-
T Consensus 148 ~~~~~~~l~~~---~i~~~~~l~VgD~~~di~~A~~aG~-------------~~i~v~~~~~~~~~~~~~~~~~~~~~~~ 211 (221)
T d1o08a_ 148 PDIFIAAAHAV---GVAPSESIGLEDSQAGIQAIKDSGA-------------LPIGVGRPEDLGDDIVIVPDTSHYTLEF 211 (221)
T ss_dssp THHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTC-------------EEEEESCHHHHCSSSEEESSGGGCCHHH
T ss_pred hHHHHHHHHHc---CCCCceEEEEecCHHHHHHHHHcCC-------------EEEEECChhhcccccEEcCCcccCCHHH
Confidence 46688888888 9999999999999999999999874 35666653 2345555655433 2344
Q ss_pred HHH
Q 044635 818 MQG 820 (831)
Q Consensus 818 L~~ 820 (831)
|+.
T Consensus 212 l~e 214 (221)
T d1o08a_ 212 LKE 214 (221)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
|