Citrus Sinensis ID: 044908

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-----
Protein Sequence
FSKASDYNNLVYKNCSSQTLAGSNESHSKSLHSLFQELVPQSSKSKFFKATAGDDPSAAVSGFFQCRGDLSNKDCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDEFIVDDETSKHDLIHKVCGQKAKDSSFEGQRDKAFETMESGVIDGKGFYSGDYESVHAMAQCEGDLIDCDCGECVSNAVQIAQEECVGSVSGQIYLDRCFISYSYFPHGSGPSGASGNSDNKKSSGGDSNTGKTVAIVLGGVAALALGFIFLSFLRSCGDKDSIW
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccEEEEEccccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHccccccEEEEcccEEEEEccccccccccccccEEEEEccccccccHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHccccccEEEEcccEEEEEEEccccccccccccccccccccccccccccEEEEEHHHHHHHHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccHcccccccccccccHHHHHHHHHHHHcccccccccccEcccccccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHcccccEEEEEEccEEEEEccccHHccccccccEEEEccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEEcccccHHHHHHHHHHHHHHccHHcccccccEEEccccEEEEEEEccccccccccccccccccccccccccEEEEEEHHHHHHHHHHHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
fskasdynnlvykncssqtlagsneshsKSLHSLFQElvpqsskskffkatagddpsaavsgffqcrgdlsnkdcfdcvntlpdlsnsLCNKAVAGriqlhgcyfyyetdefivddetskhdLIHKVcgqkakdssfegqRDKAFETMesgvidgkgfysgdyESVHAMAQcegdlidcdcgecvSNAVQIAQEEcvgsvsgqiyldrcfisysyfphgsgpsgasgnsdnkkssggdsntgKTVAIVLGGVAALALGFIFLSFLrscgdkdsiw
Flexible Loop (DISEMBL)
fskasdynnlVYKNCSSQTLAGSNESHSKSLHSLFQELVPQSSKSKFFKATAGDDPSAAVSGFFQCRGDLSNKDCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDEFIVDDETSKHDLIHKVcgqkakdssfegqRDKAFETMESGVIDGKGFYSGDYESVHAMAQCEGDLIDCDCGECVSNAVQIAQEECVGSVSGQIYLDRCFISYSYFPHGSGPSGASGNSDNKKSSGGDSNTGKTVAIVLGGVAALALGFIFLSFlrscgdkdsiw
Low Complexity Region (SEG)
FSKASDYNNLVYKNCSSQTLAGSNESHSKSLHSLFQELVPQSSKSKFFKATAGDDPSAAVSGFFQCRGDLSNKDCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDEFIVDDETSKHDLIHKVCGQKAKDSSFEGQRDKAFETMESGVIDGKGFYSGDYESVHAMAQCEGDLIDCDCGECVSNAVQIAQEECVGSVSGQIYLDRCFISYSYFPHGSGPsgasgnsdnkkssggdsnTGKTvaivlggvaalalgfiflSFLRSCGDKDSIW
Disordered region (IsUnstruct)
**********************************************************AVSGFFQCRGDLSNKDCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDEFIVDDETSKHDLIHKVCG********************SGVIDGKGFYSGDYESVHAMAQCEGDLIDCDCGECVSNAVQIAQEECVGSVSGQIYLDRCFISYSYFP**************************TVAIVLGGVAALALGFIFLSFLRSCG******
Disordered Region (DISOPRED)
FS**SDYNNLVYKNCSSQTLAGSNESHSKSLHSLFQELVPQSSKSKFFKATAGDDPSAAVSGFFQCRGDLSNKDCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDEFIVDDETSKHDLIHKVCGQKAKDSSFEGQRDKAFETMES********YSGDYESVHAMAQCEGDLIDCDCGECVSNAVQIAQEECVGSVSGQIYLDRCFISYSYFPHG**************************AIVLGGVAALALGFIFLSFLRSCGDK****
Disordered Region (DISEMBL)
FSKASDYNNLVYKNCSSQTLAGSNESHSKSLHSLFQELVPQSSKSKFFKATAGDDPSAAVSGFFQCRGDLSNKDCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDEFIVDDETSKHDLIHKVCGQ*********QRDKAFETMESGVIDGKGFYSGDYESVHAMAQCEGDLIDCDCGECVSNAVQIAQEECVGSVSGQIYLDRCFISYSYFPHG********************NTGKTVAIVLGGVAALALGFIFLSFLRSCGDKDSIW
Disordered Region (DISPRO)
*****DYNNLVYKNCSSQTLAGSNESHSKSLHSLFQELVPQSSKSKFFKATAGDDPSAAVSGFFQCRGDLSNKDCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDEFIVDDETSKHDLIHKVCGQKAKDSSFEGQRDKAFETMESGVIDGKGFYSGDYESVHAMAQCEGDLIDCDCGECVSNAVQIAQEECVGSVSGQIYLDRCFISYSYFPHGSGP*****************NTGKTVAIVLGGVAALALGFIFLSFLRSCGD*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
FSKASDYNNLVYKNCSSQTLAGSNESHSKSLHSLFQELVPQSSKSKFFKATAGDDPSAAVSGFFQCRGDLSNKDCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDEFIVDDETSKHDLIHKVCGQKAKDSSFEGQRDKAFETMESGVIDGKGFYSGDYESVHAMAQCEGDLIDCDCGECVSNAVQIAQEECVGSVSGQIYLDRCFISYSYFPHGSGPSGASGNSDNKKSSGGDSNTGKTVAIVLGGVAALALGFIFLSFLRSCGDKDSIW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	275	2.2.26 [Sep-21-2011]
O22784	304	Cysteine-rich repeat secr	yes	no	0.970	0.878	0.450	5e-59
Q6NM73	307	Cysteine-rich repeat secr	no	no	0.956	0.856	0.434	4e-56
Q6E263	319	Cysteine-rich repeat secr	no	no	0.938	0.808	0.374	1e-47
Q8GXV7	303	Cysteine-rich repeat secr	no	no	0.934	0.848	0.414	7e-47
Q6NKQ9	279	Cysteine-rich repeat secr	no	no	0.876	0.863	0.309	3e-23
Q8GUJ2	299	Cysteine-rich repeat secr	no	no	0.96	0.882	0.301	1e-22
Q9ZU94	288	Cysteine-rich repeat secr	no	no	0.927	0.885	0.293	1e-20
Q0WPN8	298	Cysteine-rich repeat secr	no	no	0.865	0.798	0.294	3e-20
Q9LV60	263	Cysteine-rich repeat secr	no	no	0.749	0.783	0.244	1e-12
O49564	642	Cysteine-rich receptor-li	no	no	0.84	0.359	0.223	1e-08

>sp|O22784|CRR11_ARATH Cysteine-rich repeat secretory protein 11 OS=Arabidopsis thaliana GN=CRRSP11 PE=2 SV=2

 Score =  228 bits (580), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 124/275 (45%), Positives = 177/275 (64%), Gaps = 8/275 (2%)

Query: 2   SKASDYNNLVYKNCSSQTLAGSNESHSKSLHSLFQELVPQSSKSKFFKATAGDDPSAAVS 61
           S + +Y NL+YK C+ Q L+  +  +S++L +++  LV QS+K++F+K T G     +V+
Sbjct: 28  SSSPEYTNLIYKGCARQRLSDPSGLYSQALSAMYGLLVTQSTKTRFYKTTTGTTSQTSVT 87

Query: 62  GFFQCRGDLSNKDCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDEFIVDDETSKH 121
           G FQCRGDLSN DC++CV+ LP LS  LC K +A R+QL GCY  YE   F    + S  
Sbjct: 88  GLFQCRGDLSNNDCYNCVSRLPVLSGKLCGKTIAARVQLSGCYLLYEISGF---AQISGM 144

Query: 122 DLIHKVCGQ-KAKDSSFEGQRDKAFETMESGVIDGKGFYSGDYESVHAMAQCEGDLIDCD 180
           +L+ K CG+     + FE +RD AF  M++GV+ G GFY+  YESV+ + QCEGD+ D D
Sbjct: 145 ELLFKTCGKNNVAGTGFEQRRDTAFGVMQNGVVQGHGFYATTYESVYVLGQCEGDIGDSD 204

Query: 181 CGECVSNAVQIAQEECVGSVSGQIYLDRCFISYSYFPHG----SGPSGASGNSDNKKSSG 236
           C  C+ NA+Q AQ EC  S+SGQIYL +CF+ YS++P+G    S P  +SG+S +  SS 
Sbjct: 205 CSGCIKNALQRAQVECGSSISGQIYLHKCFVGYSFYPNGVPKRSSPYPSSGSSGSSSSSS 264

Query: 237 GDSNTGKTVAIVLGGVAALALGFIFLSFLRSCGDK 271
               TGKTVAI++GG A +    I L F+++   K
Sbjct: 265 SSGTTGKTVAIIVGGTAGVGFLVICLLFVKNLMKK 299

Arabidopsis thaliana (taxid: 3702)

>sp|Q6NM73|CRR3_ARATH Cysteine-rich repeat secretory protein 3 OS=Arabidopsis thaliana GN=CRRSP3 PE=2 SV=1

 Score =  218 bits (555), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 123/283 (43%), Positives = 172/283 (60%), Gaps = 20/283 (7%)

Query: 2   SKASDYNNLVYKNCSSQTLAGSNESHSKSLHSLFQELVPQSSKSKFFKATAGDDPSAAVS 61
           S  ++Y  L+YK C+ Q  +  +  +S++L ++F  LV QS+K++F+K T G   +    
Sbjct: 27  SATTEYTTLIYKGCARQQFSDPSGLYSQALSAMFGSLVSQSTKTRFYKTTTGTSTTTITG 86

Query: 62  GFFQCRGDLSNKDCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDEFIVDDETSKH 121
             FQCRGDLSN DC++CV+ LP LS+ LC K +A R+QL GCY  YE   F    + S  
Sbjct: 87  -LFQCRGDLSNHDCYNCVSRLPVLSDKLCGKTIASRVQLSGCYLLYEVSGF---SQISGM 142

Query: 122 DLIHKVCGQK-AKDSSFEGQRDKAFETMESGVIDGKGFYSGDYESVHAMAQCEGDLIDCD 180
           +++ K CG+     + FE +RD AF  M++GV+ G GFY+  YESV+ + QCEGD+ D D
Sbjct: 143 EMLFKTCGKNNIAGTGFEERRDTAFGVMQNGVVSGHGFYATTYESVYVLGQCEGDVGDTD 202

Query: 181 CGECVSNAVQIAQEECVGSVSGQIYLDRCFISYSYFPHG------------SGPSGASGN 228
           C  CV NA++ AQ EC  S+SGQIYL +CFI+YSY+P+G            S  S  S N
Sbjct: 203 CSGCVKNALEKAQVECGSSISGQIYLHKCFIAYSYYPNGVPRRSSSSSSSSSSSSSGSSN 262

Query: 229 SDNKKSSGGDSNTGKTVAIVLGGVAALALGFIFLSFLRSCGDK 271
           SD   S+G    TGKTVAI++GG A +    I L F ++   K
Sbjct: 263 SDPSTSTGA---TGKTVAIIVGGAAGVGFLVICLLFAKNLMRK 302

Arabidopsis thaliana (taxid: 3702)

>sp|Q6E263|CRR39_ARATH Cysteine-rich repeat secretory protein 39 OS=Arabidopsis thaliana GN=CRRSP39 PE=2 SV=2

 Score =  189 bits (481), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/294 (37%), Positives = 162/294 (55%), Gaps = 36/294 (12%)

Query: 6   DYNNLVYKNC-----------SSQTLAGSNES---HSKSLHSLFQELVPQSSKSKFFKAT 51
           DY+ LV+K C           ++++   SN++    +++L S  ++L  +SS+SKF K  
Sbjct: 30  DYDTLVFKQCDPLDANILQKATTKSPNYSNQNLFLRAQALSSFLRKLESESSRSKFLKTL 89

Query: 52  AGDDPSAAVSGFFQCRGDLSNKDCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDE 111
            G++   AVSG+FQCR D  ++ C  CV  L ++S+  C  A + RI L GC+  Y+ + 
Sbjct: 90  VGNE-KHAVSGWFQCREDYPSEICHKCVGDLREISSRSCGNATSARIHLRGCHLIYKFER 148

Query: 112 FIVDD------------ETSKHDLIHKVCGQKAKDS--SFEGQRDKAFETMESGVIDGKG 157
                            ET +H LIHK+C     ++   FE  R +A    E+GV+DG G
Sbjct: 149 IDTPGAQVNNHHKYKLFETPEHGLIHKICDGATAETFPGFEEMRTEALTAAETGVVDGHG 208

Query: 158 FYSGDYESVHAMAQCEGDLIDCDCGECVSNAVQIAQEECVGSVSGQIYLDRCFISYSYFP 217
           FY   Y+ +H +AQC+G +  CDCGEC+S+A   A EEC  S++GQIYL+ C + Y+Y P
Sbjct: 209 FYEDSYKLLHVVAQCDGHVEACDCGECISSAAAAAAEECRWSIAGQIYLEGCHVGYTYHP 268

Query: 218 HGSGPSGASGNSDNKKSSGGDSNTGKTVAIVLGGVAALALGFIFLSFLRSCGDK 271
           H          +D+    G   NTGK++AIV+GGVAAL    IF  FL+S   K
Sbjct: 269 H-------ELPNDSYHEEGSKVNTGKSLAIVVGGVAALVFVAIFFMFLKSLRKK 315

Arabidopsis thaliana (taxid: 3702)

>sp|Q8GXV7|CRR56_ARATH Cysteine-rich repeat secretory protein 56 OS=Arabidopsis thaliana GN=CRRSP56 PE=1 SV=2

 Score =  187 bits (475), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 118/285 (41%), Positives = 164/285 (57%), Gaps = 28/285 (9%)

Query: 6   DYNNLVYKNCSSQTLAGSNESHSKSLHSLFQELVPQSSKSKFFKATAGDDPSAAVSGFFQ 65
           DY NL++K C++Q         S++L +LF  LV QSS+S F   T+G D + AV G FQ
Sbjct: 24  DYKNLIFKGCANQKSPDPTGVFSQNLKNLFTSLVSQSSQSSFASVTSGTDNTTAVIGVFQ 83

Query: 66  CRGDLSNKDCFDCVNTLPDLSNSLCN------KAVAGRIQLHGCYFYYETDEFIVDDETS 119
           CRGDL N  C+DCV+ +P L + LC         VA R+ L GCY  YE+  F    +TS
Sbjct: 84  CRGDLQNAQCYDCVSKIPKLVSKLCGGGRDDGNVVAARVHLAGCYIRYESSGF---RQTS 140

Query: 120 KHDLIHKVCGQK-AKDSSFEGQRDKAFETMESGV--------IDGKGFYSGDYESVHAMA 170
             +++ +VCG+K + D  F G+R+ AF   E+GV          G GFY+G YESV+ + 
Sbjct: 141 GTEMLFRVCGKKDSNDPGFVGKRETAFGMAENGVKTGSSGGGGGGGGFYAGQYESVYVLG 200

Query: 171 QCEGDLIDCDCGECVSNAVQIAQEECVGSVSGQIYLDRCFISYSYFPHGSGPSGASGNSD 230
           QCEG L + DCGECV +  + A+ EC  S SGQ+YL +CF+SYSY+ HG          +
Sbjct: 201 QCEGSLGNSDCGECVKDGFEKAKSECGESNSGQVYLQKCFVSYSYYSHGV--------PN 252

Query: 231 NKKSSGGD--SNTGKTVAIVLGGVAALALGFIFLSFLRSCGDKDS 273
            +  SGG+   +T +T+A+ +GGV  L    + L  LRS   K S
Sbjct: 253 IEPLSGGEKRQHTERTIALAVGGVFVLGFVIVCLLVLRSAMKKKS 297

Arabidopsis thaliana (taxid: 3702)

>sp|Q6NKQ9|CRR15_ARATH Cysteine-rich repeat secretory protein 15 OS=Arabidopsis thaliana GN=CRRSP15 PE=2 SV=1

 Score =  108 bits (271), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 126/265 (47%), Gaps = 24/265 (9%)

Query: 10  LVYKNCSSQTLAGSNESHSKSLHSLFQELVPQSSKSKFFKATAGDDPSA-----AVSGFF 64
            +Y  CS +     N     +  +    +V  SS + F     G+D S+     AV G +
Sbjct: 29  FIYGGCSPEKYT-PNTPFESNRDTFLSSVVTSSSDASFNSFAVGNDSSSSSSSSAVFGLY 87

Query: 65  QCRGDLSNKDCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDEFIVDDETSKHDLI 124
           QCR DL + DC  C+ T  D    +C  +    +QL GC+  YET++F+   +TS   L 
Sbjct: 88  QCRDDLRSSDCSKCIQTSVDQITLICPYSYGASLQLEGCFLRYETNDFLGKPDTS---LR 144

Query: 125 HKVCGQKA--KDSSFEGQRDKAFETMESGVIDGKGFYSGDYESVHAMAQCEGDLIDCDCG 182
           +K C  K+   D  F  +RD     +ES  +  K   SG    V   AQC GDL   DC 
Sbjct: 145 YKKCSSKSVENDYDFFKRRDDVLSDLESTQLGYKVSRSG---LVEGYAQCVGDLSPSDCT 201

Query: 183 ECVSNAVQIAQEECVGSVSGQIYLDRCFISYSYFPHGSGPSGASGNSDNKKSSGGDSNTG 242
            C++ +V   +  C  +V+ ++YL +C+  Y     GSG    S +  N     GD + G
Sbjct: 202 ACLAESVGKLKNLCGSAVAAEVYLAQCYARY----WGSGYYDFSSDPTN-----GD-HVG 251

Query: 243 KTVAIVLGGVAALALGFIFLSFLRS 267
           K++AI++G +A  A+  + LS  R+
Sbjct: 252 KSIAIIVGVIAGFAILVVLLSLCRN 276

Arabidopsis thaliana (taxid: 3702)

>sp|Q8GUJ2|CRR2_ARATH Cysteine-rich repeat secretory protein 2 OS=Arabidopsis thaliana GN=CRRSP2 PE=2 SV=1

 Score =  107 bits (266), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 137/285 (48%), Gaps = 21/285 (7%)

Query: 2   SKASDYNNLVYKNCSSQTLAGSN--ESHSKSLHSLFQELVPQSSKSKFFKATAGDDPSAA 59
           S +S  +N +Y  CS    + S+  E++  SL S F     Q+  + F   T   +P+  
Sbjct: 23  SSSSPTDNYIYAVCSPAKFSPSSGYETNLNSLLSSFVTSTAQTRYANFTVPTGKPEPTVT 82

Query: 60  VSGFFQCRGDLSNKDCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDEFI-VDDET 118
           V G +QCRGDL    C  CV++      +LC+ + +G +Q+  C   Y+   F+ V D+T
Sbjct: 83  VYGIYQCRGDLDPTACSTCVSSAVAQVGALCSNSYSGFLQMENCLIRYDNKSFLGVQDKT 142

Query: 119 SKHDLIHKVCGQKAKDSSFEGQRDKAFETMESGVIDGKGFYSGDYES-----VHAMAQCE 173
               LI   CGQ  + +      D+   T  S VI   G   G Y +     V  +AQC 
Sbjct: 143 ----LILNKCGQPMEFN------DQDALTKASDVIGSLGTGDGSYRTGGNGNVQGVAQCS 192

Query: 174 GDLIDCDCGECVSNAVQIAQEECVGSVSGQIYLDRCFISYSY-FPHGSGPSGASGNSDNK 232
           GDL    C +C+S+A+   + +C  +  G +YL +C+  +S    H     G +   + +
Sbjct: 193 GDLSTSQCQDCLSDAIGRLKSDCGMAQGGYVYLSKCYARFSVGGSHARQTPGPNFGHEGE 252

Query: 233 KSSGGDSNTGKTVAIVLGGVAALALGFIFLSFLRSCGDK--DSIW 275
           K +  D+  GKT+AI++G V  + L  +FL+F+  C  K  D  W
Sbjct: 253 KGNKDDNGVGKTLAIIIGIVTLIILLVVFLAFVGKCCRKLQDEKW 297

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZU94|CRR12_ARATH Cysteine-rich repeat secretory protein 12 OS=Arabidopsis thaliana GN=CRRSP12 PE=2 SV=2

 Score =  100 bits (248), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 134/276 (48%), Gaps = 21/276 (7%)

Query: 1   FSKASDYNNLVYKNCSSQT-LAGSNESHSKSLHSLFQELVPQSSKSKF--FKATAGDDPS 57
           FS A+  +  +Y  CS +    GS   +  +++SL    V  +S   +  F        S
Sbjct: 19  FSSAA-VDTFIYGGCSQEKYFPGS--PYESNVNSLLTSFVSSASLYTYNNFTTNGISGDS 75

Query: 58  AAVSGFFQCRGDLSNK--DCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDEFI-V 114
           ++V G +QCRGDLS+   DC  CV        SLC  A  G +QL GC+  Y+   F+ V
Sbjct: 76  SSVYGLYQCRGDLSSGSGDCARCVARAVSRLGSLCAMASGGALQLEGCFVKYDNTTFLGV 135

Query: 115 DDETSKHDLIHKVCGQKAKDSSFE-GQRDKAFETMESGVIDGKGFYSGDYESVHAMAQCE 173
           +D+T    ++ + CG     +S E  +RD    ++ +    G  +  G    +  +AQC 
Sbjct: 136 EDKT----VVVRRCGPPVGYNSDEMTRRDSVVGSLAAS--SGGSYRVGVSGELQGVAQCT 189

Query: 174 GDLIDCDCGECVSNAVQIAQEECVGSVSGQIYLDRCFISYSYFPHGSGPSGASGNSDNKK 233
           GDL   +C +C+  A+   + +C G+  G +YL +C+  YS      G    +      +
Sbjct: 190 GDLSATECQDCLMEAIGRLRTDCGGAAWGDVYLAKCYARYS----ARGGHSRANGYGGNR 245

Query: 234 SSGGDSNTGKTVAIVLGGVAALALGFIFLSFL-RSC 268
           ++  D    KT+AI++G +A + L  +FLSF+ +SC
Sbjct: 246 NNNDDDEIEKTLAIIVGLIAGVTLLVVFLSFMAKSC 281

Arabidopsis thaliana (taxid: 3702)

>sp|Q0WPN8|CRR60_ARATH Cysteine-rich repeat secretory protein 60 OS=Arabidopsis thaliana GN=CRRSP60 PE=1 SV=1

 Score = 99.4 bits (246), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 121/255 (47%), Gaps = 17/255 (6%)

Query: 2   SKASDYNNLVYKNCSSQTLAGSNESHSKSLHSLFQELVPQSSKSKFFKAT-AGDDPSAAV 60
           S  S  +  V+  CS Q  + ++ ++  +L+SL   LV  ++ S +   T  G   S   
Sbjct: 29  SATSATDTFVFGGCSQQKFSPAS-AYESNLNSLLTSLVNSATYSSYNNFTIMGSSSSDTA 87

Query: 61  SGFFQCRGDLSNKDCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDEFIVDDETSK 120
            G FQCRGDLS  DC  CV         LC     G +QL GCY  Y+   F+  ++ + 
Sbjct: 88  RGLFQCRGDLSMPDCATCVARAVSQVGPLCPFTCGGALQLAGCYIKYDNISFLGQEDKT- 146

Query: 121 HDLIHKVCG-QKAKDSSFEGQRDKAFETMESGVIDGKGFYSGDYESVHAMAQCEGDLIDC 179
             ++ K CG  +  ++    +RD     + +G   G  F +G    V  M QC GDL   
Sbjct: 147 --VVLKKCGSSEGYNTDGISRRDAVLTELVNG---GGYFRAGGSGDVQGMGQCVGDLTVS 201

Query: 180 DCGECVSNAVQIAQEECVGSVSGQIYLDRCFISYSYFPHGSGPSGASGNSDNKKSSGGDS 239
           +C +C+  A+   + +C  +V G ++L +C+  YS      G    + + + K + GG+ 
Sbjct: 202 ECQDCLGTAIGRLKNDCGTAVFGDMFLAKCYARYST----DGAQHYAKSHNYKTNYGGE- 256

Query: 240 NTGKTVAIVLGGVAA 254
              KT AI++G +AA
Sbjct: 257 ---KTFAIIIGLLAA 268

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LV60|CRR55_ARATH Cysteine-rich repeat secretory protein 55 OS=Arabidopsis thaliana GN=CRRSP55 PE=2 SV=1

 Score = 73.6 bits (179), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 11/217 (5%)

Query: 11  VYKNCSSQTLAGSNESHSKSLHSLFQELVPQSSKSKFFKATAGD--DPSAAVSGFFQCRG 68
           +++ C++ +   ++   SK++ SL   LV ++  SK FK T     +    V G  QCRG
Sbjct: 24  IWQLCNTNSNISASSQVSKNIDSLLATLVSKTP-SKGFKTTTSSSYNNKEKVYGLAQCRG 82

Query: 69  DLSNKDCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDEFIVDDETSKHDLIHKVC 128
           D+SN DC  C+         +C      RI    C+  Y  + FI   +T    +   V 
Sbjct: 83  DISNTDCSTCIQDAAKKIREVCQNQSDSRILYDFCFLRYSQENFIGKLDTGAGLIYFNVA 142

Query: 129 GQKAKDS-SFEGQRDKAFETMESGVI--DGKGFYSG-----DYESVHAMAQCEGDLIDCD 180
                D   F+ +    F+ + S  +    KG   G      + +++ + QC  DL + D
Sbjct: 143 NVTEIDPKKFDNELGALFDKIRSEAVLPKNKGLGKGKTKLTPFVTLNGLVQCTRDLSELD 202

Query: 181 CGECVSNAVQIAQEECVGSVSGQIYLDRCFISYSYFP 217
           C +C + AV      C      ++    C++ Y ++P
Sbjct: 203 CAQCFATAVGSFMTTCHNKKGCRVLYSSCYVRYEFYP 239

Arabidopsis thaliana (taxid: 3702)

>sp|O49564|CRK27_ARATH Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=3 SV=2

 Score = 60.5 bits (145), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/259 (22%), Positives = 94/259 (36%), Gaps = 28/259 (10%)

Query: 23  SNESHSKSLHSLFQELVPQSSKSKFFKATAGDDPSAAVSGFFQCRGDL-SNKDCFDCVNT 81
           SN S+S +L+ L   L   +     F   + +    A++    CRGD+  N+DC  C+ T
Sbjct: 43  SNTSYSLNLNRLISSLPDLTPTINGFYNISINGEVNAIA---LCRGDVKPNQDCISCITT 99

Query: 82  LPDLSNSLCNKAVAGRIQLHGCYFYYETDEFIVDDETSKHDLIHKVCGQKAKD------- 134
                   C   +   I L  C F Y +   +   E               K+       
Sbjct: 100 AAKQLVESCPNIIEANIWLEKCMFRYTSRIILGQMEPVPFSYTSSNVSVTDKEGFSKGLG 159

Query: 135 ---SSFEGQRDKAFETMESGVIDGKGFYSGDYESVHAMAQCEGDLIDCDCGECVSNAVQI 191
               S   + D A ET E        F +G   +++A+AQC  DL + DC  C++     
Sbjct: 160 DLLDSLGAKIDAANETKEVK------FAAGVKGTIYALAQCTPDLSESDCRICLAQIFAG 213

Query: 192 AQEECVGSVSGQIYLDRCFISYSYFP--------HGSGPSGASGNSDNKKSSGGDSNTGK 243
               C G   G      C+  +  +P            P  +  N+  +   G   +  K
Sbjct: 214 VPTCCDGKTGGWWTNPSCYFRFEVYPFFDLSVTSEQKQPLSSHNNNTRRSDQGKSKDRSK 273

Query: 244 TVAIVLGGVAALALGFIFL 262
           T+   +  + A+ LG +FL
Sbjct: 274 TLIFAVVPIVAIILGLVFL 292

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	275
224125734	294	predicted protein [Populus trichocarpa]	0.956	0.894	0.547	1e-75
255561973	308	DUF26 domain-containing protein 2 precur	0.92	0.821	0.547	1e-70
356535456	302	PREDICTED: cysteine-rich repeat secretor	0.967	0.880	0.516	6e-67
356576446	297	PREDICTED: cysteine-rich repeat secretor	0.96	0.888	0.518	3e-65
449432508	301	PREDICTED: cysteine-rich repeat secretor	0.949	0.867	0.485	1e-64
255637905	304	unknown [Glycine max]	0.967	0.875	0.479	2e-64
147863491	523	hypothetical protein VITISV_018684 [Viti	0.949	0.499	0.498	2e-64
356575214	299	PREDICTED: cysteine-rich repeat secretor	0.967	0.889	0.483	3e-64
449487484	301	PREDICTED: cysteine-rich repeat secretor	0.949	0.867	0.485	3e-64
449527300	303	PREDICTED: cysteine-rich repeat secretor	0.956	0.867	0.483	2e-63

>gi|224125734|ref|XP_002319662.1| predicted protein [Populus trichocarpa] gi|222858038|gb|EEE95585.1| predicted protein [Populus trichocarpa]

 Score =  288 bits (738), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 149/272 (54%), Positives = 197/272 (72%), Gaps = 9/272 (3%)

Query: 4   ASDYNNLVYKNCSSQTLAGSNESHSKSLHSLFQELVPQSSKSKFFKATAGDDPSAAVSGF 63
           +SD++ LVYK CS+QT  GS ESHS++L SLFQEL+PQSS SKFFK TAGD+ +  +S F
Sbjct: 31  SSDFSTLVYKKCSNQTYNGSTESHSQTLSSLFQELLPQSSTSKFFKTTAGDE-NVGISAF 89

Query: 64  FQCRGDLSNKDCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDEFIVDDETSKHDL 123
           FQCR DL N +C++CVNTLP +SNSLC +A+A R+ L GCYF YETD  +  +ETS H+L
Sbjct: 90  FQCRNDLRNDECYNCVNTLPKVSNSLCKQALAARVHLDGCYFKYETDGLV--EETSTHEL 147

Query: 124 IHKVCGQK-AKDSSFEGQRDKAFETMESGVIDGKGFYSGDYESVHAMAQCEGDLIDCDCG 182
           +H+ C +K      FE  ++ AF  MESGV+   GFY  +YES+H MAQC+GDL  CDCG
Sbjct: 148 LHQTCSEKKVVGHGFEELKNAAFAAMESGVVSEGGFYETNYESLHVMAQCQGDLKGCDCG 207

Query: 183 ECVSNAVQIAQEECVGSVSGQIYLDRCFISYSYFPHGSGPSGASGNSDNKKSSGGDSNTG 242
           EC+S+A+Q+A+E+C  S+S Q+Y+D+CF+SY+Y+     P G  GNS   K S    +TG
Sbjct: 208 ECISSAIQVAEEKCGASISSQVYMDKCFMSYTYY-----PDGIPGNSYPGKESNYGKSTG 262

Query: 243 KTVAIVLGGVAALALGFIFLSFLRSCGDKDSI 274
           +TVAIV+GG   L +GFI L F +SCG K+ I
Sbjct: 263 RTVAIVVGGAVVLGVGFILLKFFKSCGKKEDI 294

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255561973|ref|XP_002521995.1| DUF26 domain-containing protein 2 precursor, putative [Ricinus communis] gi|223538799|gb|EEF40399.1| DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]

 Score =  272 bits (696), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 144/263 (54%), Positives = 183/263 (69%), Gaps = 10/263 (3%)

Query: 2   SKASDYNNLVYKNCSSQTL-AGSNESHSKSLHSLFQELVPQSSKSKFFKATAGDDPSAAV 60
           S  SDY++LVY  C++QT  A S ESHS+ L SLFQ+L+ QSS SKF++ T+GD+    +
Sbjct: 29  SSNSDYSSLVYSKCANQTYTAASTESHSQVLSSLFQDLLAQSSHSKFYRTTSGDE-QIGI 87

Query: 61  SGFFQCRGDLSNKDCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDEFIVDDETSK 120
           SG FQCRGDL + DC++CV+TLP++S S C +AVA R+QL+GCYF+YETD F+  DET K
Sbjct: 88  SGLFQCRGDLGSDDCYNCVSTLPEMSTSKCKQAVAARVQLNGCYFHYETDGFL--DETPK 145

Query: 121 HDLIHKVCGQK-AKDSSFEGQRDKAFETMESGVIDGKGFYSGDYESVHAMAQCEGDLIDC 179
           H+L+H+ C +K A DSSF   RD AF  MES  +  KGFY  DYE V   AQCEGDL  C
Sbjct: 146 HELLHESCSEKKAVDSSFVEVRDAAFLVMESEGVSEKGFYEADYEHVRVAAQCEGDLGGC 205

Query: 180 DCGECVSNAVQIAQEECVGSVSGQIYLDRCFISYSYFPHGSGPSGASGNSDNKKSSGGDS 239
           DC ECV  A++IAQE+C  SVSG++YLD CF+SYS     + P G  G S   +      
Sbjct: 206 DCSECVRFAMEIAQEDCGSSVSGKVYLDSCFVSYS-----NNPDGTPGKSYPDEEGKKRD 260

Query: 240 NTGKTVAIVLGGVAALALGFIFL 262
            TGKT+AIVLGG A+L  GF+ L
Sbjct: 261 KTGKTIAIVLGGAASLFAGFMGL 283

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356535456|ref|XP_003536261.1| PREDICTED: cysteine-rich repeat secretory protein 3-like [Glycine max]

 Score =  260 bits (664), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 142/275 (51%), Positives = 179/275 (65%), Gaps = 9/275 (3%)

Query: 4   ASDYNNLVYKNCSSQTLAGSNESHSKSLHSLFQELVPQSSKSKFFKATAGDDPSAAVSGF 63
           ASDY  LVYK CS +T    N  +S++L SLF  LV QS+K+KFFKAT G+    +++G 
Sbjct: 26  ASDYATLVYKGCSKETFTDPNGVYSQALSSLFGSLVSQSTKAKFFKATTGNGGQTSMTGL 85

Query: 64  FQCRGDLSNKDCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDEFIVDDETSKHDL 123
           FQCRGDLSN DC++CV+ LP LS+ LC K  A RIQL GCY  YE   F    + S   +
Sbjct: 86  FQCRGDLSNSDCYNCVSRLPVLSDKLCGKTTAARIQLLGCYMLYEVVGF--SQQISGMQI 143

Query: 124 IHKVC-GQKAKDSSFEGQRDKAFETMESGVIDGKGFYSGDYESVHAMAQCEGDLIDCDCG 182
           ++K C G  A    FE +RD AF  ME+GV+ G GFY+  Y+S++ M QCEGD+ D DCG
Sbjct: 144 LYKTCGGTNAAGRGFEERRDTAFSVMENGVVSGHGFYATSYQSLYVMGQCEGDVGDSDCG 203

Query: 183 ECVSNAVQIAQEECVGSVSGQIYLDRCFISYSYFP------HGSGPSGASGNSDNKKSSG 236
           ECV +AVQ AQ EC  S+SGQ+YL +CFISYSY+P      H S  S +S +S++  SS 
Sbjct: 204 ECVKSAVQRAQVECGSSISGQVYLHKCFISYSYYPNGVPGRHSSSSSASSSSSNSYSSSS 263

Query: 237 GDSNTGKTVAIVLGGVAALALGFIFLSFLRSCGDK 271
              NTGKTVAI+LGG A +A   I L F RS   K
Sbjct: 264 SGQNTGKTVAIILGGAAGVAFLVICLMFARSLKKK 298

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356576446|ref|XP_003556342.1| PREDICTED: cysteine-rich repeat secretory protein 3-like [Glycine max]

 Score =  254 bits (648), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 142/274 (51%), Positives = 179/274 (65%), Gaps = 10/274 (3%)

Query: 4   ASDYNNLVYKNCSSQTLAGSNESHSKSLHSLFQELVPQSSKSKFFKATAGDDPSAAVSGF 63
           ASDY  LVYK CS +T    N  +S++L SLF  LV QS+K+KFFKATAG   S+ ++G 
Sbjct: 24  ASDYTTLVYKGCSKETFTDPNGVYSQALSSLFGSLVSQSTKAKFFKATAGSGQSS-MTGL 82

Query: 64  FQCRGDLSNKDCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDEFIVDDETSKHDL 123
           FQCR DLSN DC++CV+ LP LS+ LC K  A RIQL GCY  YE   F    + S   +
Sbjct: 83  FQCRDDLSNSDCYNCVSRLPVLSDKLCGKTTAARIQLLGCYMLYEVVGFT---QISGMQI 139

Query: 124 IHKVCG-QKAKDSSFEGQRDKAFETMESGVIDGKGFYSGDYESVHAMAQCEGDLIDCDCG 182
           ++K CG   A    FE +RD AF  ME+GV+ G GFY+  Y+S++ M QCEGD+ D DCG
Sbjct: 140 LYKTCGGTNAAGRGFEERRDTAFSVMENGVVTGHGFYATSYQSLYVMGQCEGDVGDSDCG 199

Query: 183 ECVSNAVQIAQEECVGSVSGQIYLDRCFISYSYFPHG-----SGPSGASGNSDNKKSSGG 237
           ECV +AVQ AQ EC  S+SGQ+YL +CFISYSY+P+G     S  + +S NS +  SS  
Sbjct: 200 ECVKSAVQRAQVECGSSISGQVYLHKCFISYSYYPNGVPGRHSSSASSSSNSYSSSSSSS 259

Query: 238 DSNTGKTVAIVLGGVAALALGFIFLSFLRSCGDK 271
             NTGKTVAI++GG A +A   I L F RS   K
Sbjct: 260 GQNTGKTVAIIVGGAAGVAFLVICLMFARSLKKK 293

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449432508|ref|XP_004134041.1| PREDICTED: cysteine-rich repeat secretory protein 3-like [Cucumis sativus]

 Score =  252 bits (643), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 130/268 (48%), Positives = 178/268 (66%), Gaps = 7/268 (2%)

Query: 5   SDYNNLVYKNCSSQTLAGSNESHSKSLHSLFQELVPQSSKSKFFKATAGDDPSAAVSGFF 64
           SDY +LVYK C+ Q L+     ++++L +LF  LV QS+K++F++ ++G   S  ++G F
Sbjct: 36  SDYTSLVYKGCAKQALSDPTGVYTQALSALFGSLVSQSTKARFYRTSSGSGQST-INGLF 94

Query: 65  QCRGDLSNKDCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDEFIVDDETSKHDLI 124
           QCRGDLSN DC++CV+ +P +  SLC K +A R+QL+GCY  YE   F    + S  +++
Sbjct: 95  QCRGDLSNGDCYNCVSKIPQIVQSLCGKTIAARVQLYGCYLLYEVSGF---AQISGFEML 151

Query: 125 HKVCG-QKAKDSSFEGQRDKAFETMESGVIDGKGFYSGDYESVHAMAQCEGDLIDCDCGE 183
           +K CG   A  S FE +RD A   +E+GV+ G GFY+ +Y+SV+ + QCEGDL D DCGE
Sbjct: 152 YKTCGSMNAPGSGFEERRDTALSVLENGVVSGHGFYTTNYQSVYVLGQCEGDLGDSDCGE 211

Query: 184 CVSNAVQIAQEECVGSVSGQIYLDRCFISYSYFPHGSGPSGASGNSDNKKSSGGDSNTGK 243
           CV NAVQ AQ EC  S+SGQ+YL RCFISYSY+P+G     +S +S +  SSGG  N GK
Sbjct: 212 CVKNAVQRAQVECGSSISGQLYLHRCFISYSYYPNGVPTRSSSPSSSSSSSSGG--NIGK 269

Query: 244 TVAIVLGGVAALALGFIFLSFLRSCGDK 271
           TVAI+LG  A +A   I L F R    K
Sbjct: 270 TVAIILGSTAGVAFVVICLLFARGLMKK 297

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255637905|gb|ACU19270.1| unknown [Glycine max]

 Score =  251 bits (642), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 130/271 (47%), Positives = 172/271 (63%), Gaps = 5/271 (1%)

Query: 2   SKASDYNNLVYKNCSSQTLAGSNESHSKSLHSLFQELVPQSSKSKFFKATAGDDPSAAVS 61
           S +SDY+ LVYK CS +     N  +S++L +LF  LV QS+K+KF+K T+G   +  ++
Sbjct: 29  STSSDYSTLVYKGCSKEPFTDPNGVYSQALSALFGSLVSQSTKAKFYKTTSGSGQNT-IT 87

Query: 62  GFFQCRGDLSNKDCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDEFIVDDETSKH 121
           G FQCRGDL+N DC++CV+ LP L + LC K  A R+QL GCY  YE   F    + S  
Sbjct: 88  GLFQCRGDLTNSDCYNCVSRLPVLCDKLCGKTTAARVQLLGCYILYEVAGF---SQISGM 144

Query: 122 DLIHKVCG-QKAKDSSFEGQRDKAFETMESGVIDGKGFYSGDYESVHAMAQCEGDLIDCD 180
            +++K CG   A    FE +RD AF  ME+GV+ G GFY+  Y+S++ M QCEGD+ D D
Sbjct: 145 QMLYKTCGATNAAGRGFEERRDTAFSVMENGVVSGHGFYTTSYQSLYVMGQCEGDVGDSD 204

Query: 181 CGECVSNAVQIAQEECVGSVSGQIYLDRCFISYSYFPHGSGPSGASGNSDNKKSSGGDSN 240
           CGECV NAVQ AQ EC  S+SGQ++L +CFISYSY+P+G        +S +  SS    N
Sbjct: 205 CGECVKNAVQRAQVECGSSISGQVFLHKCFISYSYYPNGVPSRSFFSSSASYSSSSSGQN 264

Query: 241 TGKTVAIVLGGVAALALGFIFLSFLRSCGDK 271
            GKT AI+LGG  A+A   I L F RS   K
Sbjct: 265 PGKTAAIILGGAVAVAFLVILLLFARSLKKK 295

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147863491|emb|CAN81929.1| hypothetical protein VITISV_018684 [Vitis vinifera]

 Score =  251 bits (641), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 134/269 (49%), Positives = 178/269 (66%), Gaps = 8/269 (2%)

Query: 4   ASDYNNLVYKNCSSQTLAGSNESHSKSLHSLFQELVPQSSKSKFFKATAGDDPSAAVSGF 63
           A+DY  LVYK C+ Q L+  N    ++L +LF  LV QS+K+KFFK T+G   ++ ++G 
Sbjct: 30  ATDYTALVYKGCAEQALSDPNAG--QALSALFGSLVSQSTKAKFFKTTSGTGQTS-ITGL 86

Query: 64  FQCRGDLSNKDCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDEFIVDDETSKHDL 123
           FQCRGDLS  DC++CVN LP +S+ LC K++A RIQL+GCY  YE   F    + S   +
Sbjct: 87  FQCRGDLSTSDCYNCVNKLPQMSDKLCGKSIASRIQLYGCYILYEVAGF---AQISGMKM 143

Query: 124 IHKVC-GQKAKDSSFEGQRDKAFETMESGVIDGKGFYSGDYESVHAMAQCEGDLIDCDCG 182
           ++K C       S FE +RD AF +MESG++ G GFY+  YESV+ + QCEGD+ D DC 
Sbjct: 144 LYKTCSATNVAGSGFEERRDTAFSSMESGMVSGHGFYATSYESVYVLGQCEGDVGDADCS 203

Query: 183 ECVSNAVQIAQEECVGSVSGQIYLDRCFISYSYFPHGSGPSGASGNSDNKKSSGGDSNTG 242
           ECV +AVQ AQ EC  S+SGQIYL +CFISYSY+P+G  P  +S +S +  SSG    TG
Sbjct: 204 ECVKSAVQRAQVECGSSISGQIYLHKCFISYSYYPNGV-PRRSSSDSSSSSSSGTRQTTG 262

Query: 243 KTVAIVLGGVAALALGFIFLSFLRSCGDK 271
           KTVAI++GG AAL    I + F R+   K
Sbjct: 263 KTVAIIVGGAAALGFVVICMLFARNLMKK 291

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356575214|ref|XP_003555737.1| PREDICTED: cysteine-rich repeat secretory protein 3-like [Glycine max]

 Score =  251 bits (640), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 131/271 (48%), Positives = 174/271 (64%), Gaps = 5/271 (1%)

Query: 2   SKASDYNNLVYKNCSSQTLAGSNESHSKSLHSLFQELVPQSSKSKFFKATAGDDPSAAVS 61
           S +SDY+ LVYK CS +     N  +S++L +LF  LV QS+K+KF+K T+G   +  ++
Sbjct: 29  STSSDYSTLVYKGCSKEPFTDPNGVYSQALSALFGSLVSQSTKAKFYKTTSGSGQNT-IT 87

Query: 62  GFFQCRGDLSNKDCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDEFIVDDETSKH 121
           G FQCRGDL+N DC++CV+ LP L + LC K  A R+QL GCY  YE   F    + S  
Sbjct: 88  GLFQCRGDLTNSDCYNCVSRLPVLCDKLCGKTTAARVQLLGCYILYEVAGF---SQISGM 144

Query: 122 DLIHKVCG-QKAKDSSFEGQRDKAFETMESGVIDGKGFYSGDYESVHAMAQCEGDLIDCD 180
            +++K CG   A    FE +RD AF  ME+GV+ G GFY+  Y+S++ M QCEGD+ D D
Sbjct: 145 QMLYKTCGATNAAGRGFEERRDTAFSVMENGVVSGHGFYTTSYQSLYVMGQCEGDVGDSD 204

Query: 181 CGECVSNAVQIAQEECVGSVSGQIYLDRCFISYSYFPHGSGPSGASGNSDNKKSSGGDSN 240
           CGECV NAVQ AQ EC  S+SGQ++L +CFISYSY+P+G     +S +S +  SS    N
Sbjct: 205 CGECVKNAVQRAQVECGSSISGQVFLHKCFISYSYYPNGVPSRSSSSSSASYSSSSSGQN 264

Query: 241 TGKTVAIVLGGVAALALGFIFLSFLRSCGDK 271
            GKT AI+LGG  A+A   I L F RS   K
Sbjct: 265 PGKTAAIILGGAVAVAFLVILLLFARSLKKK 295

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449487484|ref|XP_004157649.1| PREDICTED: cysteine-rich repeat secretory protein 3-like [Cucumis sativus]

 Score =  251 bits (640), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 130/268 (48%), Positives = 177/268 (66%), Gaps = 7/268 (2%)

Query: 5   SDYNNLVYKNCSSQTLAGSNESHSKSLHSLFQELVPQSSKSKFFKATAGDDPSAAVSGFF 64
           SDY +LVYK C+ Q L+     ++++L +LF  LV QS+K++F+K ++G   S  ++G F
Sbjct: 36  SDYTSLVYKGCAKQALSDPTGVYTQALSALFGSLVSQSTKARFYKTSSGSGQST-INGLF 94

Query: 65  QCRGDLSNKDCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDEFIVDDETSKHDLI 124
           QCRGDLSN DC++CV+ +P +  SLC K +A R+QL+GCY  YE   F    + S  +++
Sbjct: 95  QCRGDLSNGDCYNCVSKIPQIVQSLCGKTIAARVQLYGCYLLYEVSGF---AQISGFEML 151

Query: 125 HKVCG-QKAKDSSFEGQRDKAFETMESGVIDGKGFYSGDYESVHAMAQCEGDLIDCDCGE 183
           +K CG      S FE +RD A   +E+GV+ G GFY+ +Y+SV+ + QCEGDL D DCGE
Sbjct: 152 YKTCGSTNVAGSGFEERRDTALSVLENGVVSGHGFYTTNYQSVYVLGQCEGDLGDSDCGE 211

Query: 184 CVSNAVQIAQEECVGSVSGQIYLDRCFISYSYFPHGSGPSGASGNSDNKKSSGGDSNTGK 243
           CV NAVQ AQ EC  S+SGQ+YL RCFISYSY+P+G     +S +S +  SSGG  N GK
Sbjct: 212 CVKNAVQRAQVECGSSISGQLYLHRCFISYSYYPNGVPTRSSSPSSSSSSSSGG--NIGK 269

Query: 244 TVAIVLGGVAALALGFIFLSFLRSCGDK 271
           TVAI+LG  A +A   I L F R    K
Sbjct: 270 TVAIILGSTAGVAFVVICLLFARGLMKK 297

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449527300|ref|XP_004170650.1| PREDICTED: cysteine-rich repeat secretory protein 3-like [Cucumis sativus]

 Score =  248 bits (633), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 132/273 (48%), Positives = 180/273 (65%), Gaps = 10/273 (3%)

Query: 5   SDYNNLVYKNCSSQTLAGSNESHSKSLHSLFQELVPQSSK-SKFFKATAGDDPSAAVSGF 63
           SDY  LVYK C+ Q  +  N  +S++L +LF  LV QS+K SKFFK T+G   +A ++G 
Sbjct: 31  SDYTTLVYKGCAKQGFSDPNGVYSQALAALFGSLVSQSAKGSKFFKTTSGTTQTA-ITGL 89

Query: 64  FQCRGDLSNKDCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDEFIVDDETSKHDL 123
           FQCRGDLSN DC++CV+ LP L++SLC + +A R+QL GCY  YE   F+   + S  ++
Sbjct: 90  FQCRGDLSNSDCYNCVSKLPQLADSLCGRTIAARVQLSGCYLLYEFPGFV---QISGFEM 146

Query: 124 IHKVCG-QKAKDSSFEGQRDKAFETMESGVIDGKGFYSGDYESVHAMAQCEGDLIDCDCG 182
           ++K CG      S FE +RD     +E+GV+ G GFY+ +Y+S++ +AQCEGDL D DCG
Sbjct: 147 LYKTCGATNIAGSGFEERRDTGLSVLENGVVSGHGFYTTNYQSLYVLAQCEGDLGDSDCG 206

Query: 183 ECVSNAVQIAQEECVGSVSGQIYLDRCFISYSYFPHG----SGPSGASGNSDNKKSSGGD 238
           ECV +AVQ AQ EC  S+SGQ+YL +CFISYSY+P+G    S     S +S +   SG  
Sbjct: 207 ECVKHAVQKAQVECGSSISGQVYLHKCFISYSYYPNGVPKRSSSPSTSSSSYSSSPSGMG 266

Query: 239 SNTGKTVAIVLGGVAALALGFIFLSFLRSCGDK 271
            NTGKTVA++LGG A +    I L F+R+   K
Sbjct: 267 QNTGKTVAVILGGAAGVGFLVICLLFIRNLKKK 299

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	275
TAIR|locus:2051089	304	PDLP3 "AT2G33330" [Arabidopsis	0.872	0.789	0.439	5.9e-57
TAIR|locus:2018314	307	PDLP2 "AT1G04520" [Arabidopsis	0.778	0.697	0.465	9.9e-55
TAIR|locus:2172492	303	PDLP1 "plasmodesmata-located p	0.767	0.696	0.445	2.3e-48
TAIR|locus:2100870	319	PDLP4 "plasmodesmata-located p	0.690	0.595	0.414	6.1e-39
TAIR|locus:2101811	279	PDLP8 "AT3G60720" [Arabidopsis	0.778	0.767	0.301	6.8e-24
TAIR|locus:2033614	299	HWI1 "HOPW1-1-INDUCED GENE1" [	0.752	0.692	0.304	2.9e-23
TAIR|locus:2151709	298	PDLP7 "plasmodesmata-located p	0.745	0.687	0.300	1.3e-22
TAIR|locus:2065450	288	PDLP6 "AT2G01660" [Arabidopsis	0.745	0.711	0.312	4.9e-21
TAIR|locus:2166091	263	AT5G48540 "AT5G48540" [Arabido	0.749	0.783	0.244	5.3e-17
TAIR|locus:2095662	252	AT3G22060 "AT3G22060" [Arabido	0.76	0.829	0.242	4.3e-11

TAIR|locus:2051089 PDLP3 "AT2G33330" [Arabidopsis thaliana (taxid:3702)]

 Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
 Identities = 109/248 (43%), Positives = 153/248 (61%)

Query:     2 SKASDYNNLVYKNCSSQTLAGSNESHSKSLHSLFQELVPQSSKSKFFKATAGDDPSAAVS 61
             S + +Y NL+YK C+ Q L+  +  +S++L +++  LV QS+K++F+K T G     +V+
Sbjct:    28 SSSPEYTNLIYKGCARQRLSDPSGLYSQALSAMYGLLVTQSTKTRFYKTTTGTTSQTSVT 87

Query:    62 GFFQCRGDLSNKDCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDEFIVDDETSKH 121
             G FQCRGDLSN DC++CV+ LP LS  LC K +A R+QL GCY  YE   F    + S  
Sbjct:    88 GLFQCRGDLSNNDCYNCVSRLPVLSGKLCGKTIAARVQLSGCYLLYEISGFA---QISGM 144

Query:   122 DLIHKVCGQK-AKDSSFEGQRDKAFETMESGVIDGKGFYSGDYESVHAMAQCEGDLIDCD 180
             +L+ K CG+     + FE +RD AF  M++GV+ G GFY+  YESV+ + QCEGD+ D D
Sbjct:   145 ELLFKTCGKNNVAGTGFEQRRDTAFGVMQNGVVQGHGFYATTYESVYVLGQCEGDIGDSD 204

Query:   181 CGECVSNAVQIAQEECVGSVSGQIYLDRCFISYSYFPHG----SGPXXXXXXXXXXXXXX 236
             C  C+ NA+Q AQ EC  S+SGQIYL +CF+ YS++P+G    S P              
Sbjct:   205 CSGCIKNALQRAQVECGSSISGQIYLHKCFVGYSFYPNGVPKRSSPYPSSGSSGSSSSSS 264

Query:   237 XXXXTGKT 244
                 TGKT
Sbjct:   265 SSGTTGKT 272

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0009506 "plasmodesma" evidence=IDA

GO:0010497 "plasmodesmata-mediated intercellular transport" evidence=IGI

GO:0046739 "spread of virus in multicellular host" evidence=IGI

TAIR|locus:2018314 PDLP2 "AT1G04520" [Arabidopsis thaliana (taxid:3702)]

 Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
 Identities = 102/219 (46%), Positives = 147/219 (67%)

Query:     2 SKASDYNNLVYKNCSSQTLAGSNESHSKSLHSLFQELVPQSSKSKFFKATAGDDPSAAVS 61
             S  ++Y  L+YK C+ Q  +  +  +S++L ++F  LV QS+K++F+K T G   +  ++
Sbjct:    27 SATTEYTTLIYKGCARQQFSDPSGLYSQALSAMFGSLVSQSTKTRFYKTTTGTS-TTTIT 85

Query:    62 GFFQCRGDLSNKDCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDEFIVDDETSKH 121
             G FQCRGDLSN DC++CV+ LP LS+ LC K +A R+QL GCY  YE   F    + S  
Sbjct:    86 GLFQCRGDLSNHDCYNCVSRLPVLSDKLCGKTIASRVQLSGCYLLYEVSGF---SQISGM 142

Query:   122 DLIHKVCGQK-AKDSSFEGQRDKAFETMESGVIDGKGFYSGDYESVHAMAQCEGDLIDCD 180
             +++ K CG+     + FE +RD AF  M++GV+ G GFY+  YESV+ + QCEGD+ D D
Sbjct:   143 EMLFKTCGKNNIAGTGFEERRDTAFGVMQNGVVSGHGFYATTYESVYVLGQCEGDVGDTD 202

Query:   181 CGECVSNAVQIAQEECVGSVSGQIYLDRCFISYSYFPHG 219
             C  CV NA++ AQ EC  S+SGQIYL +CFI+YSY+P+G
Sbjct:   203 CSGCVKNALEKAQVECGSSISGQIYLHKCFIAYSYYPNG 241

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0009506 "plasmodesma" evidence=IDA

GO:0010497 "plasmodesmata-mediated intercellular transport" evidence=IGI

GO:0046739 "spread of virus in multicellular host" evidence=IGI

TAIR|locus:2172492 PDLP1 "plasmodesmata-located protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
 Identities = 102/229 (44%), Positives = 139/229 (60%)

Query:     6 DYNNLVYKNCSSQTLAGSNESHSKSLHSLFQELVPQSSKSKFFKATAGDDPSAAVSGFFQ 65
             DY NL++K C++Q         S++L +LF  LV QSS+S F   T+G D + AV G FQ
Sbjct:    24 DYKNLIFKGCANQKSPDPTGVFSQNLKNLFTSLVSQSSQSSFASVTSGTDNTTAVIGVFQ 83

Query:    66 CRGDLSNKDCFDCVNTLPDLSNSLCN------KAVAGRIQLHGCYFYYETDEFIVDDETS 119
             CRGDL N  C+DCV+ +P L + LC         VA R+ L GCY  YE+  F    +TS
Sbjct:    84 CRGDLQNAQCYDCVSKIPKLVSKLCGGGRDDGNVVAARVHLAGCYIRYESSGF---RQTS 140

Query:   120 KHDLIHKVCGQK-AKDSSFEGQRDKAFETMESGVIDGK--------GFYSGDYESVHAMA 170
               +++ +VCG+K + D  F G+R+ AF   E+GV  G         GFY+G YESV+ + 
Sbjct:   141 GTEMLFRVCGKKDSNDPGFVGKRETAFGMAENGVKTGSSGGGGGGGGFYAGQYESVYVLG 200

Query:   171 QCEGDLIDCDCGECVSNAVQIAQEECVGSVSGQIYLDRCFISYSYFPHG 219
             QCEG L + DCGECV +  + A+ EC  S SGQ+YL +CF+SYSY+ HG
Sbjct:   201 QCEGSLGNSDCGECVKDGFEKAKSECGESNSGQVYLQKCFVSYSYYSHG 249

GO:0005576 "extracellular region" evidence=ISM

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0010497 "plasmodesmata-mediated intercellular transport" evidence=IGI

GO:0046739 "spread of virus in multicellular host" evidence=IGI

TAIR|locus:2100870 PDLP4 "plasmodesmata-located protein 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
 Identities = 85/205 (41%), Positives = 123/205 (60%)

Query:    28 SKSLHSLFQELVPQSSKSKFFKATAGDDPSAAVSGFFQCRGDLSNKDCFDCVNTLPDLSN 87
             +++L S  ++L  +SS+SKF K   G++  A VSG+FQCR D  ++ C  CV  L ++S+
Sbjct:    66 AQALSSFLRKLESESSRSKFLKTLVGNEKHA-VSGWFQCREDYPSEICHKCVGDLREISS 124

Query:    88 SLCNKAVAGRIQLHGCYFYY-----ETDEFIVDD-------ETSKHDLIHKVC-GQKAKD 134
               C  A + RI L GC+  Y     +T    V++       ET +H LIHK+C G  A+ 
Sbjct:   125 RSCGNATSARIHLRGCHLIYKFERIDTPGAQVNNHHKYKLFETPEHGLIHKICDGATAET 184

Query:   135 -SSFEGQRDKAFETMESGVIDGKGFYSGDYESVHAMAQCEGDLIDCDCGECVSNAVQIAQ 193
                FE  R +A    E+GV+DG GFY   Y+ +H +AQC+G +  CDCGEC+S+A   A 
Sbjct:   185 FPGFEEMRTEALTAAETGVVDGHGFYEDSYKLLHVVAQCDGHVEACDCGECISSAAAAAA 244

Query:   194 EECVGSVSGQIYLDRCFISYSYFPH 218
             EEC  S++GQIYL+ C + Y+Y PH
Sbjct:   245 EECRWSIAGQIYLEGCHVGYTYHPH 269

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2101811 PDLP8 "AT3G60720" [Arabidopsis thaliana (taxid:3702)]

 Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
 Identities = 70/232 (30%), Positives = 110/232 (47%)

Query:     2 SKASDYNNL-VYKNCSSQTLAGSNESHSKSLHSLFQELVPQSSKSKFFKATAGDDPSA-- 58
             S++S  +++ +Y  CS +     N     +  +    +V  SS + F     G+D S+  
Sbjct:    20 SRSSSESHIFIYGGCSPEKYT-PNTPFESNRDTFLSSVVTSSSDASFNSFAVGNDSSSSS 78

Query:    59 ---AVSGFFQCRGDLSNKDCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDEFIVD 115
                AV G +QCR DL + DC  C+ T  D    +C  +    +QL GC+  YET++F+  
Sbjct:    79 SSSAVFGLYQCRDDLRSSDCSKCIQTSVDQITLICPYSYGASLQLEGCFLRYETNDFLGK 138

Query:   116 DETSKHDLIHKVCGQKA--KDSSFEGQRDKAFETMESGVIDGKGFYSGDYESVHAMAQCE 173
              +TS   L +K C  K+   D  F  +RD     +ES  +  K   SG    V   AQC 
Sbjct:   139 PDTS---LRYKKCSSKSVENDYDFFKRRDDVLSDLESTQLGYKVSRSG---LVEGYAQCV 192

Query:   174 GDLIDCDCGECVSNAVQIAQEECVGSVSGQIYLDRCFISY---SYFPHGSGP 222
             GDL   DC  C++ +V   +  C  +V+ ++YL +C+  Y    Y+   S P
Sbjct:   193 GDLSPSDCTACLAESVGKLKNLCGSAVAAEVYLAQCYARYWGSGYYDFSSDP 244

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2033614 HWI1 "HOPW1-1-INDUCED GENE1" [Arabidopsis thaliana (taxid:3702)]

 Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
 Identities = 66/217 (30%), Positives = 109/217 (50%)

Query:     2 SKASDYNNLVYKNCSSQTLAGSN--ESHSKSLHSLFQELVPQSSKSKFFKATAGDDPSAA 59
             S +S  +N +Y  CS    + S+  E++  SL S F     Q+  + F   T   +P+  
Sbjct:    23 SSSSPTDNYIYAVCSPAKFSPSSGYETNLNSLLSSFVTSTAQTRYANFTVPTGKPEPTVT 82

Query:    60 VSGFFQCRGDLSNKDCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDEFI-VDDET 118
             V G +QCRGDL    C  CV++      +LC+ + +G +Q+  C   Y+   F+ V D+T
Sbjct:    83 VYGIYQCRGDLDPTACSTCVSSAVAQVGALCSNSYSGFLQMENCLIRYDNKSFLGVQDKT 142

Query:   119 SKHDLIHKVCGQKAKDSSFEGQRDKAFETMES-GVIDGKGFYSGDYESVHAMAQCEGDLI 177
                 LI   CGQ  + +  +    KA + + S G  DG  + +G   +V  +AQC GDL 
Sbjct:   143 ----LILNKCGQPMEFND-QDALTKASDVIGSLGTGDGS-YRTGGNGNVQGVAQCSGDLS 196

Query:   178 DCDCGECVSNAVQIAQEECVGSVSGQIYLDRCFISYS 214
                C +C+S+A+   + +C  +  G +YL +C+  +S
Sbjct:   197 TSQCQDCLSDAIGRLKSDCGMAQGGYVYLSKCYARFS 233

GO:0005576 "extracellular region" evidence=ISM

GO:0051707 "response to other organism" evidence=IEP

GO:0009506 "plasmodesma" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0006914 "autophagy" evidence=RCA

TAIR|locus:2151709 PDLP7 "plasmodesmata-located protein 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 65/216 (30%), Positives = 104/216 (48%)

Query:     2 SKASDYNNLVYKNCSSQTLAGSNESHSKSLHSLFQELVPQSSKSKFFKATA-GDDPSAAV 60
             S  S  +  V+  CS Q  + ++ ++  +L+SL   LV  ++ S +   T  G   S   
Sbjct:    29 SATSATDTFVFGGCSQQKFSPAS-AYESNLNSLLTSLVNSATYSSYNNFTIMGSSSSDTA 87

Query:    61 SGFFQCRGDLSNKDCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDEFIVDDETSK 120
              G FQCRGDLS  DC  CV         LC     G +QL GCY  Y+   F+  ++ + 
Sbjct:    88 RGLFQCRGDLSMPDCATCVARAVSQVGPLCPFTCGGALQLAGCYIKYDNISFLGQEDKT- 146

Query:   121 HDLIHKVCGQKAKDSSFEG--QRDKAFETMESGVIDGKGFYSGDYESVHAMAQCEGDLID 178
               ++ K CG  ++  + +G  +RD     + +G   G  F +G    V  M QC GDL  
Sbjct:   147 --VVLKKCGS-SEGYNTDGISRRDAVLTELVNG---GGYFRAGGSGDVQGMGQCVGDLTV 200

Query:   179 CDCGECVSNAVQIAQEECVGSVSGQIYLDRCFISYS 214
              +C +C+  A+   + +C  +V G ++L +C+  YS
Sbjct:   201 SECQDCLGTAIGRLKNDCGTAVFGDMFLAKCYARYS 236

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2065450 PDLP6 "AT2G01660" [Arabidopsis thaliana (taxid:3702)]

 Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
 Identities = 69/221 (31%), Positives = 109/221 (49%)

Query:     1 FSKASDYNNLVYKNCSSQT-LAGSN-ESHSKSLHSLFQELVPQSSKSKFF-KATAGDDPS 57
             FS A+  +  +Y  CS +    GS  ES+  SL + F       + + F     +GD  S
Sbjct:    19 FSSAA-VDTFIYGGCSQEKYFPGSPYESNVNSLLTSFVSSASLYTYNNFTTNGISGD--S 75

Query:    58 AAVSGFFQCRGDLSNK--DCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDEFI-V 114
             ++V G +QCRGDLS+   DC  CV        SLC  A  G +QL GC+  Y+   F+ V
Sbjct:    76 SSVYGLYQCRGDLSSGSGDCARCVARAVSRLGSLCAMASGGALQLEGCFVKYDNTTFLGV 135

Query:   115 DDETSKHDLIHKVCGQKAKDSSFE-GQRDKAFETMESGVIDGKGFYSGDYESVHAMAQCE 173
             +D+T    ++ + CG     +S E  +RD    ++ +    G  +  G    +  +AQC 
Sbjct:   136 EDKT----VVVRRCGPPVGYNSDEMTRRDSVVGSLAAS--SGGSYRVGVSGELQGVAQCT 189

Query:   174 GDLIDCDCGECVSNAVQIAQEECVGSVSGQIYLDRCFISYS 214
             GDL   +C +C+  A+   + +C G+  G +YL +C+  YS
Sbjct:   190 GDLSATECQDCLMEAIGRLRTDCGGAAWGDVYLAKCYARYS 230

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2166091 AT5G48540 "AT5G48540" [Arabidopsis thaliana (taxid:3702)]

 Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
 Identities = 53/217 (24%), Positives = 92/217 (42%)

Query:    11 VYKNCSSQTLAGSNESHSKSLHSLFQELVPQSSKSKFFKATAGD--DPSAAVSGFFQCRG 68
             +++ C++ +   ++   SK++ SL   LV ++  SK FK T     +    V G  QCRG
Sbjct:    24 IWQLCNTNSNISASSQVSKNIDSLLATLVSKTP-SKGFKTTTSSSYNNKEKVYGLAQCRG 82

Query:    69 DLSNKDCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDEFIVDDETSKHDLIHKVC 128
             D+SN DC  C+         +C      RI    C+  Y  + FI   +T    +   V 
Sbjct:    83 DISNTDCSTCIQDAAKKIREVCQNQSDSRILYDFCFLRYSQENFIGKLDTGAGLIYFNVA 142

Query:   129 GQKAKD-SSFEGQRDKAFETMESGVI--DGKGFYSGD-----YESVHAMAQCEGDLIDCD 180
                  D   F+ +    F+ + S  +    KG   G      + +++ + QC  DL + D
Sbjct:   143 NVTEIDPKKFDNELGALFDKIRSEAVLPKNKGLGKGKTKLTPFVTLNGLVQCTRDLSELD 202

Query:   181 CGECVSNAVQIAQEECVGSVSGQIYLDRCFISYSYFP 217
             C +C + AV      C      ++    C++ Y ++P
Sbjct:   203 CAQCFATAVGSFMTTCHNKKGCRVLYSSCYVRYEFYP 239

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0080167 "response to karrikin" evidence=IEP

TAIR|locus:2095662 AT3G22060 "AT3G22060" [Arabidopsis thaliana (taxid:3702)]

 Score = 164 (62.8 bits), Expect = 4.3e-11, P = 4.3e-11
 Identities = 54/223 (24%), Positives = 96/223 (43%)

Query:     5 SDYNNLVYKNCSSQTLAGSNES-HSKSLHSLFQELVPQSSKSKFFKATAGDDPSAAVSGF 63
             S  N  ++  CS    + +++S +  +L++LF +L  +   + F  ++ G+ P+  V+G 
Sbjct:    29 SQNNAFLFHKCSDIEGSFTSKSLYESNLNNLFSQLSYKVPSTGFAASSTGNTPNN-VNGL 87

Query:    64 FQCRGDLSNKDCFDCVNT-LPDLSNSLCNKAVAGRIQLHGCYFYYETDEFIVDDETSKHD 122
               CRGD S+ DC  C+ T +P+L    C    AG +    C   Y +  F    +     
Sbjct:    88 ALCRGDASSSDCRSCLETAIPELRQR-CPNNKAGIVWYDNCLVKYSSTNFFGKIDFENRF 146

Query:   123 LIHKVCGQKAKDSSFEGQRDKAF--E-TMESGVIDG-KGFYSGDYE----SVHAMAQCEG 174
              ++ V  +   D S    + KA   E T ++   D  K F +G+       ++ + QC  
Sbjct:   147 YLYNV--KNVSDPSTFNSQTKALLTELTKKATTRDNQKLFATGEKNIGKNKLYGLVQCTR 204

Query:   175 DLIDCDCGECVSNAVQIAQEECVGSVSGQIYLDRCFISYSYFP 217
             DL    C  C++  +      C G   G++    C   Y  +P
Sbjct:   205 DLKSITCKACLNGIIGELPNCCDGKEGGRVVGGSCNFRYEIYP 247

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0005773 "vacuole" evidence=IDA

GO:0005618 "cell wall" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O22784	CRR11_ARATH	No assigned EC number	0.4509	0.9709	0.8782	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00130477 hypothetical protein (294 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	275
pfam01657	106	pfam01657, Stress-antifung, Salt stress response/a	3e-14
pfam01657	106	pfam01657, Stress-antifung, Salt stress response/a	4e-14

>gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal

 Score = 67.1 bits (164), Expect = 3e-14
 Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 4/100 (4%)

Query: 16  SSQTLAGSNESHSKSLHSLFQELVPQSSKSK---FFKATAGDDPSAAVSGFFQCRGDLSN 72
           +S     +N +   +L++L   L   ++ S    F   T+G  P   V G  QCRGDLS 
Sbjct: 8   TSGNYTTANSTFESNLNALLSSLSSNAASSSGKGFAAGTSGAAPDT-VYGLAQCRGDLSA 66

Query: 73  KDCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDEF 112
            DC  C+ T        C     GRI    C+  YE+  F
Sbjct: 67  SDCRSCLATAVSELRRCCPNKKGGRIWYDSCFLRYESYPF 106

This domain is often found in association with the kinase domains pfam00069 or pfam07714. In many proteins it is duplicated. It contains six conserved cysteines which are involved in disulphide bridges. It has a role in salt stress response and has antifungal activity. Length = 106

>gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal

 Score = 66.3 bits (162), Expect = 4e-14
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 6/87 (6%)

Query: 134 DSSFEGQRDKAFETMESGV--IDGKGFYSG----DYESVHAMAQCEGDLIDCDCGECVSN 187
           +S+FE   +    ++ S      GKGF +G      ++V+ +AQC GDL   DC  C++ 
Sbjct: 16  NSTFESNLNALLSSLSSNAASSSGKGFAAGTSGAAPDTVYGLAQCRGDLSASDCRSCLAT 75

Query: 188 AVQIAQEECVGSVSGQIYLDRCFISYS 214
           AV   +  C     G+I+ D CF+ Y 
Sbjct: 76  AVSELRRCCPNKKGGRIWYDSCFLRYE 102

This domain is often found in association with the kinase domains pfam00069 or pfam07714. In many proteins it is duplicated. It contains six conserved cysteines which are involved in disulphide bridges. It has a role in salt stress response and has antifungal activity. Length = 106

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	275
PF01657	106	Stress-antifung: Salt stress response/antifungal;	99.93
PF01657	106	Stress-antifung: Salt stress response/antifungal;	99.88
PF08693	40	SKG6: Transmembrane alpha-helix domain; InterPro:	97.3
PF01102	122	Glycophorin_A: Glycophorin A; InterPro: IPR001195	95.51
PTZ00382	96	Variant-specific surface protein (VSP); Provisiona	95.38
PF04478	154	Mid2: Mid2 like cell wall stress sensor; InterPro:	94.18
PF14610	189	DUF4448: Protein of unknown function (DUF4448)	93.4
PF02439	38	Adeno_E3_CR2: Adenovirus E3 region protein CR2; In	92.98
PF02009	299	Rifin_STEVOR: Rifin/stevor family; InterPro: IPR00	92.74
PF15102	146	TMEM154: TMEM154 protein family	90.71
PF06697	278	DUF1191: Protein of unknown function (DUF1191); In	89.81
PF03302	397	VSP: Giardia variant-specific surface protein; Int	89.8
PF12877	684	DUF3827: Domain of unknown function (DUF3827); Int	88.56
PF02439	38	Adeno_E3_CR2: Adenovirus E3 region protein CR2; In	87.91
PTZ00046	358	rifin; Provisional	87.6
TIGR01477	353	RIFIN variant surface antigen, rifin family. This	86.98
PF05454	290	DAG1: Dystroglycan (Dystrophin-associated glycopro	84.79
PF15345	233	TMEM51: Transmembrane protein 51	84.55
PF08693	40	SKG6: Transmembrane alpha-helix domain; InterPro:	83.91
PF01034	64	Syndecan: Syndecan domain; InterPro: IPR001050 The	83.82
PF08374	221	Protocadherin: Protocadherin; InterPro: IPR013585	83.49
PF02480	439	Herpes_gE: Alphaherpesvirus glycoprotein E; InterP	82.03
PF13908	179	Shisa: Wnt and FGF inhibitory regulator	80.47
PF04689	69	S1FA: DNA binding protein S1FA; InterPro: IPR00677	80.32

>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function

Probab=99.93  E-value=5.5e-26  Score=176.97  Aligned_cols=100  Identities=31%  Similarity=0.584  Sum_probs=76.3

Q ss_pred             ccccc-c-cccc-CCCchHHHHHHHHHHHhcccCCC---CCceeeecCCCCCCcEEEEEecCCCCCccchHHHHHHhhHH
Q 044908           12 YKNCS-S-QTLA-GSNESHSKSLHSLFQELVPQSSK---SKFFKATAGDDPSAAVSGFFQCRGDLSNKDCFDCVNTLPDL   85 (275)
Q Consensus        12 ~~~C~-~-~~~~-~~~s~y~~nl~~ll~~L~~~~~~---~~f~~~~~g~~~~~~vygl~~CrgD~s~~~C~~Cl~~a~~~   85 (275)
                      |+.|+ + .+++ +.+++|+.||+.||+.|..+++.   .+|+++..| .+++++|||+||++|+++++|+.||+.|..+
T Consensus         1 ~~~Cs~~~~~~~~~~~~~f~~~l~~ll~~l~~~a~~~~~~~f~~~~~~-~~~~~vYgl~qC~~Dls~~dC~~Cl~~a~~~   79 (106)
T PF01657_consen    1 WHFCSSNTNNNYTTDNSTFEQNLNSLLSSLVSNAASSSSKGFATGSAG-SGPDTVYGLAQCRGDLSPSDCRACLADAVAN   79 (106)
T ss_dssp             ---E---SSB----TT-THHHHHHHHHHHHHHHGGGTT-TEEEEEE---ST---EEEEEEE-TTS-HHHHHHHHHHHHCC
T ss_pred             CCcCCCCCCCCcCCCCchHHHHHHHHHHHHHHHHhhccccCcEEeecC-CCCCeEEEEEEcCCCCChhhhHHHHHHHHHH
Confidence            78899 3 3445 57888999999999999988653   379998888 8899999999999999999999999999999


Q ss_pred             hhhcCcCCceeEEEeCceEEEEecCcc
Q 044908           86 SNSLCNKAVAGRIQLHGCYFYYETDEF  112 (275)
Q Consensus        86 ~~~~C~~~~~a~i~~d~C~lRYs~~~f  112 (275)
                      +.+.|+..++++||++.|+||||+++|
T Consensus        80 ~~~~C~~~~g~~v~~~~C~lRY~~~~F  106 (106)
T PF01657_consen   80 ISSCCPGSRGGRVWYDSCFLRYENYPF  106 (106)
T ss_dssp             HHHHTTSBSSEEEEESSEEEEEESS--
T ss_pred             HHHhCCCCceEEEECCCEEEEEECCCC
Confidence            999999999999999999999999988

The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D.

>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function

Probab=99.88  E-value=4.7e-23  Score=160.42  Aligned_cols=85  Identities=34%  Similarity=0.741  Sum_probs=69.4

Q ss_pred             chhHHHHHHHHHHhhhcccCCC--CccccC----CCCcEEEEEEcCCCCCcchhHHHHHHHHHHHHhhCCCCcceEEEcc
Q 044908          134 DSSFEGQRDKAFETMESGVIDG--KGFYSG----DYESVHAMAQCEGDLIDCDCGECVSNAVQIAQEECVGSVSGQIYLD  207 (275)
Q Consensus       134 ~~~F~~~~~~~~~~l~~~~~~~--~~f~~~----~~~~vYgLaQCt~DLs~~dC~~CL~~a~~~i~~~C~~~~ggrv~~~  207 (275)
                      +..|++++..++..|.+.++.+  .+|+++    +.++||||+||++||++++|+.||+.++.+++++|++++||+|+++
T Consensus        16 ~~~f~~~l~~ll~~l~~~a~~~~~~~f~~~~~~~~~~~vYgl~qC~~Dls~~dC~~Cl~~a~~~~~~~C~~~~g~~v~~~   95 (106)
T PF01657_consen   16 NSTFEQNLNSLLSSLVSNAASSSSKGFATGSAGSGPDTVYGLAQCRGDLSPSDCRACLADAVANISSCCPGSRGGRVWYD   95 (106)
T ss_dssp             T-THHHHHHHHHHHHHHHGGGTT-TEEEEEE--ST---EEEEEEE-TTS-HHHHHHHHHHHHCCHHHHTTSBSSEEEEES
T ss_pred             CchHHHHHHHHHHHHHHHHhhccccCcEEeecCCCCCeEEEEEEcCCCCChhhhHHHHHHHHHHHHHhCCCCceEEEECC
Confidence            4569999999999988775432  477764    4789999999999999999999999999999999999999999999


Q ss_pred             eeEEEEecccC
Q 044908          208 RCFISYSYFPH  218 (275)
Q Consensus       208 ~C~lRYe~~~F  218 (275)
                      +|+||||+|+|
T Consensus        96 ~C~lRY~~~~F  106 (106)
T PF01657_consen   96 SCFLRYENYPF  106 (106)
T ss_dssp             SEEEEEESS--
T ss_pred             CEEEEEECCCC
Confidence            99999999998

The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D.

>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]

Probab=97.30  E-value=0.0002  Score=45.34  Aligned_cols=26  Identities=19%  Similarity=0.085  Sum_probs=15.3

Q ss_pred             EEEEeehHHHHHHHHHHHHHHHHhhC
Q 044908          244 TVAIVLGGVAALALGFIFLSFLRSCG  269 (275)
Q Consensus       244 iiaivv~~v~~v~~~~~~~~~~r~~~  269 (275)
                      .+++++|++++++++++++++||||+
T Consensus        14 a~~VvVPV~vI~~vl~~~l~~~~rR~   39 (40)
T PF08693_consen   14 AVGVVVPVGVIIIVLGAFLFFWYRRK   39 (40)
T ss_pred             EEEEEechHHHHHHHHHHhheEEecc
Confidence            45677887766655555555555443

This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].

>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane

Probab=95.51  E-value=0.0042  Score=49.35  Aligned_cols=22  Identities=14%  Similarity=0.134  Sum_probs=14.3

Q ss_pred             CCCCCcEEEEeehHHHHHHHHH
Q 044908          238 DSNTGKTVAIVLGGVAALALGF  259 (275)
Q Consensus       238 ~~~~~~iiaivv~~v~~v~~~~  259 (275)
                      +...+.|+.|++++++.+++++
T Consensus        60 ~fs~~~i~~Ii~gv~aGvIg~I   81 (122)
T PF01102_consen   60 RFSEPAIIGIIFGVMAGVIGII   81 (122)
T ss_dssp             SSS-TCHHHHHHHHHHHHHHHH
T ss_pred             CccccceeehhHHHHHHHHHHH
Confidence            3445568888888888774444

Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.

>PTZ00382 Variant-specific surface protein (VSP); Provisional

Probab=95.38  E-value=0.017  Score=44.03  Aligned_cols=22  Identities=23%  Similarity=0.145  Sum_probs=15.2

Q ss_pred             CCCCCCcEEEEeehHHHHHHHH
Q 044908          237 GDSNTGKTVAIVLGGVAALALG  258 (275)
Q Consensus       237 ~~~~~~~iiaivv~~v~~v~~~  258 (275)
                      ++.+++.|++|+|++++++.+|
T Consensus        61 ~~ls~gaiagi~vg~~~~v~~l   82 (96)
T PTZ00382         61 SGLSTGAIAGISVAVVAVVGGL   82 (96)
T ss_pred             CCcccccEEEEEeehhhHHHHH
Confidence            4456778999999877666333

>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region

Probab=94.18  E-value=0.069  Score=43.83  Aligned_cols=31  Identities=19%  Similarity=0.348  Sum_probs=15.9

Q ss_pred             CcEEEEeehHHHHHHHHH--HHHHHHHhhCCCC
Q 044908          242 GKTVAIVLGGVAALALGF--IFLSFLRSCGDKD  272 (275)
Q Consensus       242 ~~iiaivv~~v~~v~~~~--~~~~~~r~~~~~~  272 (275)
                      .+||++||++-++++|++  +.|+|++|+||++
T Consensus        49 nIVIGvVVGVGg~ill~il~lvf~~c~r~kktd   81 (154)
T PF04478_consen   49 NIVIGVVVGVGGPILLGILALVFIFCIRRKKTD   81 (154)
T ss_pred             cEEEEEEecccHHHHHHHHHhheeEEEecccCc
Confidence            457888988644443332  3333334444444

The remainder of the protein sequence is serine-rich and of low complexity, and is therefore impossible to align accurately. Mid2 is thought to act as a mechanosensor of cell wall stress. The C-terminal cytoplasmic region of Mid2 is known to interact with Rom2, a guanine nucleotide exchange factor (GEF) for Rho1, which is part of the cell wall integrity signalling pathway [].

>PF14610 DUF4448: Protein of unknown function (DUF4448)

Probab=93.40  E-value=0.11  Score=44.34  Aligned_cols=27  Identities=19%  Similarity=0.150  Sum_probs=17.9

Q ss_pred             CCcEEEEeehHHHHHHHHHHHHHHHHh
Q 044908          241 TGKTVAIVLGGVAALALGFIFLSFLRS  267 (275)
Q Consensus       241 ~~~iiaivv~~v~~v~~~~~~~~~~r~  267 (275)
                      ....++|+||+++++++++++++++++
T Consensus       156 ~~~~laI~lPvvv~~~~~~~~~~~~~~  182 (189)
T PF14610_consen  156 GKYALAIALPVVVVVLALIMYGFFFWN  182 (189)
T ss_pred             cceeEEEEccHHHHHHHHHHHhhheee
Confidence            455889999998877555544444443

>PF02439 Adeno_E3_CR2: Adenovirus E3 region protein CR2; InterPro: IPR003470 Early region 3 (E3) of human adenoviruses (Ads) codes for proteins that appear to control viral interactions with the host []

Probab=92.98  E-value=0.069  Score=33.33  Aligned_cols=16  Identities=31%  Similarity=0.472  Sum_probs=10.1

Q ss_pred             EEEEeehHHHHHHHHH
Q 044908          244 TVAIVLGGVAALALGF  259 (275)
Q Consensus       244 iiaivv~~v~~v~~~~  259 (275)
                      +|+|++++++.+++++
T Consensus         5 ~IaIIv~V~vg~~iii   20 (38)
T PF02439_consen    5 TIAIIVAVVVGMAIII   20 (38)
T ss_pred             hhhHHHHHHHHHHHHH
Confidence            5777777766654443

This region called CR1 (conserved region 1) [] is found three times in Human adenovirus 19 (a subgroup D adenovirus) 49 kDa protein in the E3 region. CR1 is also found in the 20.1 Kd protein of subgroup B adenoviruses. The function of this 80 amino acid region is unknown. This region is probably a divergent immunoglobulin domain.

>PF02009 Rifin_STEVOR: Rifin/stevor family; InterPro: IPR002858 Malaria is still a major cause of mortality in many areas of the world

Probab=92.74  E-value=0.023  Score=51.97  Aligned_cols=15  Identities=20%  Similarity=0.352  Sum_probs=10.6

Q ss_pred             HHHHHHHHHhcccCC
Q 044908           29 KSLHSLFQELVPQSS   43 (275)
Q Consensus        29 ~nl~~ll~~L~~~~~   43 (275)
                      +-|..+++.+-..++
T Consensus        35 PeMK~Vme~F~rqTs   49 (299)
T PF02009_consen   35 PEMKSVMENFDRQTS   49 (299)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            578888888865554

Plasmodium falciparum causes the most severe human form of the disease and is responsible for most fatalities. Severe cases of malaria can occur when the parasite invades and then proliferates within red blood cell erythrocytes. The parasite produces many variant antigenic proteins, encoded by multigene families, which are present on the surface of the infected erythrocyte and play important roles in virulence. A crucial survival mechanism for the malaria parasite is its ability to evade the immune response by switching these variant surface antigens. The high virulence of P. falciparum relative to other malarial parasites is in large part due to the fact that in this organism many of these surface antigens mediate the binding of infected erythrocytes to the vascular endothelium (cytoadherence) and non-infected erythrocytes (rosetting). This can lead to the accumulation of infected cells in the vasculature of a variety of organs, blocking the blood flow and reducing the oxygen supply. Clinical symptoms of severe infection can include fever, progressive anaemia, multi-organ dysfunction and coma. For more information see []. Several multicopy gene families have been described in Plasmodium falciparum, including the stevor family of subtelomeric open reading frames and the rif interspersed repetitive elements. Both families contain three predicted transmembrane segments. It has been proposed that stevor and rif are members of a larger superfamily that code for variant surface antigens [].

>PF15102 TMEM154: TMEM154 protein family

Probab=90.71  E-value=0.17  Score=41.21  Aligned_cols=12  Identities=17%  Similarity=0.166  Sum_probs=8.3

Q ss_pred             EEEEeehHHHHH
Q 044908          244 TVAIVLGGVAAL  255 (275)
Q Consensus       244 iiaivv~~v~~v  255 (275)
                      ++.|+||.|+++
T Consensus        58 iLmIlIP~VLLv   69 (146)
T PF15102_consen   58 ILMILIPLVLLV   69 (146)
T ss_pred             EEEEeHHHHHHH
Confidence            778888855543

>PF06697 DUF1191: Protein of unknown function (DUF1191); InterPro: IPR010605 This family contains hypothetical plant proteins of unknown function

Probab=89.81  E-value=0.29  Score=44.26  Aligned_cols=20  Identities=30%  Similarity=-0.177  Sum_probs=10.6

Q ss_pred             CCCCCCCcEEEE-eehHHHHH
Q 044908          236 GGDSNTGKTVAI-VLGGVAAL  255 (275)
Q Consensus       236 ~~~~~~~~iiai-vv~~v~~v  255 (275)
                      +++...|++|+- ++++++++
T Consensus       207 ~~~~~~W~iv~g~~~G~~~L~  227 (278)
T PF06697_consen  207 RKRSWWWKIVVGVVGGVVLLG  227 (278)
T ss_pred             CCcceeEEEEEEehHHHHHHH
Confidence            555566765543 55554433

>PF03302 VSP: Giardia variant-specific surface protein; InterPro: IPR005127 During infection, the intestinal protozoan parasite Giardia lamblia virus undergoes continuous antigenic variation which is determined by diversification of the parasite's major surface antigen, named VSP (variant surface protein)

Probab=89.80  E-value=0.35  Score=46.17  Aligned_cols=30  Identities=20%  Similarity=0.152  Sum_probs=19.4

Q ss_pred             CCCCCCcEEEEeehHHHHHHHHHHHHHHHH
Q 044908          237 GDSNTGKTVAIVLGGVAALALGFIFLSFLR  266 (275)
Q Consensus       237 ~~~~~~~iiaivv~~v~~v~~~~~~~~~~r  266 (275)
                      ++-+++.|..|.|++|++|.-||-+|+||.
T Consensus       362 s~LstgaIaGIsvavvvvVgglvGfLcWwf  391 (397)
T PF03302_consen  362 SGLSTGAIAGISVAVVVVVGGLVGFLCWWF  391 (397)
T ss_pred             ccccccceeeeeehhHHHHHHHHHHHhhhe
Confidence            344677799999998887744443344443

>PF12877 DUF3827: Domain of unknown function (DUF3827); InterPro: IPR024606 The function of the proteins in this entry is not currently known, but one of the human proteins (Q9HCM3 from SWISSPROT) has been implicated in pilocytic astrocytomas [, , ]

Probab=88.56  E-value=0.53  Score=46.99  Aligned_cols=29  Identities=10%  Similarity=0.130  Sum_probs=20.6

Q ss_pred             CcEEEEEecCCCCCccchHHHHHHhhHHh
Q 044908           58 AAVSGFFQCRGDLSNKDCFDCVNTLPDLS   86 (275)
Q Consensus        58 ~~vygl~~CrgD~s~~~C~~Cl~~a~~~~   86 (275)
                      +-+|+.--=+|-++.++=+.=|.+.....
T Consensus        78 ~i~~aVr~~~~~LnGt~~S~lL~~Ls~~~  106 (684)
T PF12877_consen   78 SITYAVRNGSGFLNGTEVSELLRQLSAVE  106 (684)
T ss_pred             EEEEEEecCceeeccHHHHHHHHhhhhhh
Confidence            57898888888888888666555544443

In the majority of cases of pilocytic astrocytomas a tandem duplication produces an in-frame fusion of the gene encoding this protein and the BRAF oncogene. The resulting fusion protein has constitutive BRAF kinase activity and is capable of transforming cells.

>PF02439 Adeno_E3_CR2: Adenovirus E3 region protein CR2; InterPro: IPR003470 Early region 3 (E3) of human adenoviruses (Ads) codes for proteins that appear to control viral interactions with the host []

Probab=87.91  E-value=0.18  Score=31.46  Aligned_cols=28  Identities=11%  Similarity=0.195  Sum_probs=14.8

Q ss_pred             cEEEEeehHHHHHHHHHHHHHHHHhhCC
Q 044908          243 KTVAIVLGGVAALALGFIFLSFLRSCGD  270 (275)
Q Consensus       243 ~iiaivv~~v~~v~~~~~~~~~~r~~~~  270 (275)
                      .||+.|+..++.+++.++++.+.+||.+
T Consensus         7 aIIv~V~vg~~iiii~~~~YaCcykk~~   34 (38)
T PF02439_consen    7 AIIVAVVVGMAIIIICMFYYACCYKKHR   34 (38)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence            3444444445556567666655444443

This region called CR1 (conserved region 1) [] is found three times in Human adenovirus 19 (a subgroup D adenovirus) 49 kDa protein in the E3 region. CR1 is also found in the 20.1 Kd protein of subgroup B adenoviruses. The function of this 80 amino acid region is unknown. This region is probably a divergent immunoglobulin domain.

>PTZ00046 rifin; Provisional

Probab=87.60  E-value=0.17  Score=47.29  Aligned_cols=15  Identities=20%  Similarity=0.352  Sum_probs=8.9

Q ss_pred             HHHHHHHHHhcccCC
Q 044908           29 KSLHSLFQELVPQSS   43 (275)
Q Consensus        29 ~nl~~ll~~L~~~~~   43 (275)
                      +-+..++...-..++
T Consensus        55 PeMK~Vme~F~rqTs   69 (358)
T PTZ00046         55 PEMKSVMENFDRQTS   69 (358)
T ss_pred             HHHHHHHHHHhHHHH
Confidence            456677766654444

>TIGR01477 RIFIN variant surface antigen, rifin family

Probab=86.98  E-value=0.19  Score=46.82  Aligned_cols=15  Identities=20%  Similarity=0.370  Sum_probs=8.9

Q ss_pred             HHHHHHHHHhcccCC
Q 044908           29 KSLHSLFQELVPQSS   43 (275)
Q Consensus        29 ~nl~~ll~~L~~~~~   43 (275)
                      +-++.++...-..++
T Consensus        58 PeMK~Vm~nF~rqTs   72 (353)
T TIGR01477        58 PEMKSVMEQFDRQTS   72 (353)
T ss_pred             HHHHHHHHHHhHHHH
Confidence            456667666654444

This model represents the rifin branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of rifin sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 20 bits.

>PF05454 DAG1: Dystroglycan (Dystrophin-associated glycoprotein 1); InterPro: IPR008465 Dystroglycan is one of the dystrophin-associated glycoproteins, which is encoded by a 5

Probab=84.79  E-value=0.28  Score=44.68  Aligned_cols=28  Identities=18%  Similarity=0.208  Sum_probs=0.0

Q ss_pred             EEEEeehHHHHHHHHHHHHHHHHhhCCC
Q 044908          244 TVAIVLGGVAALALGFIFLSFLRSCGDK  271 (275)
Q Consensus       244 iiaivv~~v~~v~~~~~~~~~~r~~~~~  271 (275)
                      |+++||.++++++.+++|+|++|||+-|
T Consensus       150 IpaVVI~~iLLIA~iIa~icyrrkR~GK  177 (290)
T PF05454_consen  150 IPAVVIAAILLIAGIIACICYRRKRKGK  177 (290)
T ss_dssp             ----------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhccc
Confidence            3444444444443344555554444433

5 kb transcript in Homo sapiens. The protein product is cleaved into two non-covalently associated subunits, [alpha] (N-terminal) and [beta] (C-terminal). In skeletal muscle the dystroglycan complex works as a transmembrane linkage between the extracellular matrix and the cytoskeleton [alpha]-dystroglycan is extracellular and binds to merosin ([alpha]-2 laminin) in the basement membrane, while [beta]-dystroglycan is a transmembrane protein and binds to dystrophin, which is a large rod-like cytoskeletal protein, absent in Duchenne muscular dystrophy patients. Dystrophin binds to intracellular actin cables. In this way, the dystroglycan complex, which links the extracellular matrix to the intracellular actin cables, is thought to provide structural integrity in muscle tissues. The dystroglycan complex is also known to serve as an agrin receptor in muscle, where it may regulate agrin-induced acetylcholine receptor clustering at the neuromuscular junction. There is also evidence which suggests the function of dystroglycan as a part of the signal transduction pathway because it is shown that Grb2, a mediator of the Ras-related signal pathway, can interact with the cytoplasmic domain of dystroglycan. In general, aberrant expression of dystrophin-associated protein complex underlies the pathogenesis of Duchenne muscular dystrophy, Becker muscular dystrophy and severe childhood autosomal recessive muscular dystrophy. Interestingly, no genetic disease has been described for either [alpha]- or [beta]-dystroglycan. Dystroglycan is widely distributed in non-muscle tissues as well as in muscle tissues. During epithelial morphogenesis of kidney, the dystroglycan complex is shown to act as a receptor for the basement membrane. Dystroglycan expression in Mus musculus brain and neural retina has also been reported. However, the physiological role of dystroglycan in non-muscle tissues has remained unclear [].; PDB: 1EG4_P.

>PF15345 TMEM51: Transmembrane protein 51

Probab=84.55  E-value=3.3  Score=36.43  Aligned_cols=29  Identities=34%  Similarity=0.236  Sum_probs=16.1

Q ss_pred             cEEEEeehHHHH-HHHHHHHHHHHHhhCCC
Q 044908          243 KTVAIVLGGVAA-LALGFIFLSFLRSCGDK  271 (275)
Q Consensus       243 ~iiaivv~~v~~-v~~~~~~~~~~r~~~~~  271 (275)
                      -+||.|+-.+.+ ++||.+|+.++.|||++
T Consensus        58 ~SVAyVLVG~Gv~LLLLSICL~IR~KRr~r   87 (233)
T PF15345_consen   58 FSVAYVLVGSGVALLLLSICLSIRDKRRRR   87 (233)
T ss_pred             EEEEEehhhHHHHHHHHHHHHHHHHHHHHh
Confidence            356666544333 35556788776554443

>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]

Probab=83.91  E-value=0.93  Score=28.75  Aligned_cols=33  Identities=24%  Similarity=0.288  Sum_probs=23.6

Q ss_pred             CCcEEEEeehHHHHHHHH-HHHHHHHHhhCCCCC
Q 044908          241 TGKTVAIVLGGVAALALG-FIFLSFLRSCGDKDS  273 (275)
Q Consensus       241 ~~~iiaivv~~v~~v~~~-~~~~~~~r~~~~~~~  273 (275)
                      ....++|.+++++.++.+ ++..+++...+||++
T Consensus         7 ~~~~vaIa~~VvVPV~vI~~vl~~~l~~~~rR~k   40 (40)
T PF08693_consen    7 NSNTVAIAVGVVVPVGVIIIVLGAFLFFWYRRKK   40 (40)
T ss_pred             CCceEEEEEEEEechHHHHHHHHHHhheEEeccC
Confidence            456799999998887444 455566777787764

This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].

>PF01034 Syndecan: Syndecan domain; InterPro: IPR001050 The syndecans are transmembrane proteoglycans which are involved in the organisation of cytoskeleton and/or actin microfilaments, and have important roles as cell surface receptors during cell-cell and/or cell-matrix interactions [, ]

Probab=83.82  E-value=0.35  Score=33.80  Aligned_cols=6  Identities=17%  Similarity=0.235  Sum_probs=0.0

Q ss_pred             HHHHHh
Q 044908          262 LSFLRS  267 (275)
Q Consensus       262 ~~~~r~  267 (275)
                      |+.+|.
T Consensus        31 f~iyR~   36 (64)
T PF01034_consen   31 FLIYRM   36 (64)
T ss_dssp             ------
T ss_pred             HHHHHH
Confidence            344454

Structurally, these proteins consist of four separate domains: A signal sequence; An extracellular domain (ectodomain) of variable length whose sequence is not evolutionary conserved in the various forms of syndecans. The ectodomain contains the sites of attachment of the heparan sulphate glycosaminoglycan side chains; A transmembrane region; A highly conserved cytoplasmic domain of about 30 to 35 residues, which could interact with cytoskeletal proteins. The proteins known to belong to this family are: Syndecan 1. Syndecan 2 or fibroglycan. Syndecan 3 or neuroglycan or N-syndecan. Syndecan 4 or amphiglycan or ryudocan. Drosophila syndecan. Caenorhabditis elegans probable syndecan (F57C7.3). Syndecan-4, a transmembrane heparan sulphate proteoglycan, is a coreceptor with integrins in cell adhesion. It has been suggested to form a ternary signalling complex with protein kinase Calpha and phosphatidylinositol 4,5-bisphosphate (PIP2). Structural studies have demonstrated that the cytoplasmic domain undergoes a conformational transition and forms a symmetric dimer in the presence of phospholipid activator PIP2, and whose overall structure in solution exhibits a twisted clamp shape having a cavity in the centre of dimeric interface. In addition, it has been observed that the syndecan-4 variable domain interacts, strongly, not only with fatty acyl groups but also the anionic head group of PIP2. These findings indicate that PIP2 promotes oligomerisation of the syndecan-4 cytoplasmic domain for transmembrane signalling and cell-matrix adhesion [, ].; GO: 0008092 cytoskeletal protein binding, 0016020 membrane; PDB: 1EJQ_B 1EJP_B 1YBO_C 1OBY_Q.

>PF08374 Protocadherin: Protocadherin; InterPro: IPR013585 The structure of protocadherins is similar to that of classic cadherins (IPR002126 from INTERPRO), but they also have some unique features associated with the cytoplasmic domains

Probab=83.49  E-value=1.6  Score=37.89  Aligned_cols=17  Identities=24%  Similarity=0.280  Sum_probs=10.5

Q ss_pred             CCCCcEEEEeehHHHHH
Q 044908          239 SNTGKTVAIVLGGVAAL  255 (275)
Q Consensus       239 ~~~~~iiaivv~~v~~v  255 (275)
                      ....++||||.++++++
T Consensus        35 d~~~I~iaiVAG~~tVI   51 (221)
T PF08374_consen   35 DYVKIMIAIVAGIMTVI   51 (221)
T ss_pred             cceeeeeeeecchhhhH
Confidence            34555677777766555

They are expressed in a variety of organisms and are found in high concentrations in the brain where they seem to be localised mainly at cell-cell contact sites. Their expression seems to be developmentally regulated [].

>PF02480 Herpes_gE: Alphaherpesvirus glycoprotein E; InterPro: IPR003404 Glycoprotein E (gE) of Alphaherpesvirus forms a complex with glycoprotein I (gI), functioning as an immunoglobulin G (IgG) Fc binding protein

Probab=82.03  E-value=0.43  Score=46.14  Aligned_cols=13  Identities=23%  Similarity=0.401  Sum_probs=8.8

Q ss_pred             EEEcCCCCCcchh
Q 044908          169 MAQCEGDLIDCDC  181 (275)
Q Consensus       169 LaQCt~DLs~~dC  181 (275)
                      +..|.++....+|
T Consensus       238 y~~C~~~~~~~~C  250 (439)
T PF02480_consen  238 YANCSPSGWPRRC  250 (439)
T ss_dssp             EEEEBTTC-TTTT
T ss_pred             hcCCCCCCCcCCC
Confidence            4579887766666

gE is involved in virus spread but is not essential for propagation [].; GO: 0016020 membrane; PDB: 2GJ7_F 2GIY_B.

>PF13908 Shisa: Wnt and FGF inhibitory regulator

Probab=80.47  E-value=0.9  Score=38.29  Aligned_cols=15  Identities=33%  Similarity=0.552  Sum_probs=7.1

Q ss_pred             CCcEEEEeehHHHHH
Q 044908          241 TGKTVAIVLGGVAAL  255 (275)
Q Consensus       241 ~~~iiaivv~~v~~v  255 (275)
                      .++|++||+++|++|
T Consensus        78 ~~iivgvi~~Vi~Iv   92 (179)
T PF13908_consen   78 TGIIVGVICGVIAIV   92 (179)
T ss_pred             eeeeeehhhHHHHHH
Confidence            334455555544444

>PF04689 S1FA: DNA binding protein S1FA; InterPro: IPR006779 S1FA is an unusual small plant peptide of only 70 amino acids with a basic domain which contains a nuclear localization signal and a putative DNA binding helix

Probab=80.32  E-value=4.4  Score=28.33  Aligned_cols=23  Identities=26%  Similarity=0.322  Sum_probs=16.7

Q ss_pred             CCCCCCCcEEEEeehHHHHHHHH
Q 044908          236 GGDSNTGKTVAIVLGGVAALALG  258 (275)
Q Consensus       236 ~~~~~~~~iiaivv~~v~~v~~~  258 (275)
                      .++-+.+.|+.|||+.+++++|+
T Consensus         7 ~KGlnPGlIVLlvV~g~ll~flv   29 (69)
T PF04689_consen    7 AKGLNPGLIVLLVVAGLLLVFLV   29 (69)
T ss_pred             ccCCCCCeEEeehHHHHHHHHHH
Confidence            45667888999988877666444

S1FA is highly conserved between dicotyledonous and monocotyledonous plants and may be a DNA-binding protein that specifically recognises the negative promoter element S1F [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	275
3a2e_A	108	Crystal Structure Of Ginkbilobin-2, The Novel Antif		2e-05

>pdb|3A2E|A Chain A, Crystal Structure Of Ginkbilobin-2, The Novel Antifungal Protein From Ginkgo Biloba Seeds Length = 108

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 7/107 (6%)
Query: 10  LVYKNCSSQTLAGSNESHSKSLHSLFQELVPQSSKS----KFFKATAGDDPSAAVSGFFQ 65
            V   C++Q +  S    +++L ++  +L   ++ S    K  +A +G  P+A   G   
Sbjct: 5   FVSSACNTQKIP-SGSPFNRNLRAMLADLRQNTAFSGYDYKTSRAGSGGAPTA--YGRAT 61
Query: 66  CRGDLSNKDCFDCVNTLPDLSNSLCNKAVAGRIQLHGCYFYYETDEF 112
           C+  +S  DC  C++ L +   S+CN A+  R+QL  C+  YE   F
Sbjct: 62  CKQSISQSDCTACLSNLVNRIFSICNNAIGARVQLVDCFIQYEQRSF 108

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	275
2e79_A	108	Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect	3e-20
2e79_A	108	Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect	6e-12
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 4e-05
 Identities = 38/251 (15%), Positives = 70/251 (27%), Gaps = 69/251 (27%)

Query: 12  YKNCSSQTLAGSNESHSKSLHSLFQELVPQ-SSKSKFFKATAGDDPSAAVSGFFQCRGDL 70
           Y +C  Q L     + +    S+  E +    +    +K    D  +  +          
Sbjct: 310 YLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPA 369

Query: 71  SNKDCFDCVNTLPD--------LS---------------NSLCNKAVA------GRIQLH 101
             +  FD ++  P         LS               N L   ++         I + 
Sbjct: 370 EYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIP 429

Query: 102 GCYFYYETDEFIVDDETSKHD-LIHKVCGQKAKDSSFEGQRDKAFETMESGVIDGKGFYS 160
             Y   +     +++E + H  ++      K  DS          + +    +D   FYS
Sbjct: 430 SIYLELKVK---LENEYALHRSIVDHYNIPKTFDS----------DDLIPPYLDQY-FYS 475

Query: 161 GDYESVHAMAQCEGDLIDCDCGECVSNAVQIAQEECVGSVSGQIYLDRCFISYSYFPHGS 220
             +   H +   E                     E +      ++LD  F+      H S
Sbjct: 476 --HIGHH-LKNIE-------------------HPERMTLFR-MVFLDFRFLE-QKIRHDS 511

Query: 221 GPSGASGNSDN 231
               ASG+  N
Sbjct: 512 TAWNASGSILN 522

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	275
3a2e_A	108	Ginkbilobin-2; domain 26 unknown function (DUF26),	99.96
2e79_A	108	Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect	99.95
3a2e_A	108	Ginkbilobin-2; domain 26 unknown function (DUF26),	99.91
2e79_A	108	Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect	99.9
2l2t_A	44	Receptor tyrosine-protein kinase ERBB-4; transmemb	95.81
2jwa_A	44	Receptor tyrosine-protein kinase ERBB-2; transmemb	95.72
2ks1_B	44	Epidermal growth factor receptor; ERBB1, ERBB2, tr	95.53
2k1k_A	38	Ephrin type-A receptor 1; EPHA1, receptor tyrosine	93.87

>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba}

Probab=99.96  E-value=1.8e-29  Score=196.17  Aligned_cols=105  Identities=25%  Similarity=0.535  Sum_probs=94.2

Q ss_pred             cccccccccccccccCCCchHHHHHHHHHHHhcccCCCC--CceeeecCCCCCCcEEEEEecCCCCCccchHHHHHHhhH
Q 044908            7 YNNLVYKNCSSQTLAGSNESHSKSLHSLFQELVPQSSKS--KFFKATAGDDPSAAVSGFFQCRGDLSNKDCFDCVNTLPD   84 (275)
Q Consensus         7 ~~~~~~~~C~~~~~~~~~s~y~~nl~~ll~~L~~~~~~~--~f~~~~~g~~~~~~vygl~~CrgD~s~~~C~~Cl~~a~~   84 (275)
                      ++.++++.|++ ++++++++|++||+.||++|+++++..  +|++...|..++++||||+|||+|+++++|+.||+.|..
T Consensus         2 ~t~~v~~~Cn~-~~~t~~s~f~~nl~~ll~~L~~~a~~s~~~~~t~~~~~~~~~~vygl~qC~~Dls~~~C~~Cl~~a~~   80 (108)
T 3a2e_A            2 NTAFVSSACNT-QKIPSGSPFNRNLRAMLADLRQNTAFSGYDYKTSRAGSGGAPTAYGRATCKQSISQSDCTACLSNLVN   80 (108)
T ss_dssp             CCCEEEEEECS-SBCCTTCTHHHHHHHHHHHHHHHGGGTTSEEEEEECCSTTCCCEEEEEEECTTSCHHHHHHHHHHHHT
T ss_pred             CcceeeeecCC-CccCCCChHHHHHHHHHHHHHhhCccccCCceEeeccCCCCceEEEEEEEcCCCCHHHHHHHHHHHHH
Confidence            67899999965 577899999999999999999887643  466666664667999999999999999999999999999


Q ss_pred             HhhhcCcCCceeEEEeCceEEEEecCcc
Q 044908           85 LSNSLCNKAVAGRIQLHGCYFYYETDEF  112 (275)
Q Consensus        85 ~~~~~C~~~~~a~i~~d~C~lRYs~~~f  112 (275)
                      ++.+.||++++|+||++.|+||||+++|
T Consensus        81 ~~~~~C~~~~g~~i~~~~C~lRY~~~~F  108 (108)
T 3a2e_A           81 RIFSICNNAIGARVQLVDCFIQYEQRSF  108 (108)
T ss_dssp             THHHHTTSBSSEEEEETTEEEEEESSCC
T ss_pred             HHHHHCCCCceEEEECCCEEEEEeCCcC
Confidence            9999999999999999999999999998

>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba}

Probab=99.91  E-value=9.3e-25  Score=169.55  Aligned_cols=97  Identities=19%  Similarity=0.424  Sum_probs=83.4

Q ss_pred             ceeeeecCCCCC--chhHHHHHHHHHHhhhcccC-CCCccccC-----CCCcEEEEEEcCCCCCcchhHHHHHHHHHHHH
Q 044908          122 DLIHKVCGQKAK--DSSFEGQRDKAFETMESGVI-DGKGFYSG-----DYESVHAMAQCEGDLIDCDCGECVSNAVQIAQ  193 (275)
Q Consensus       122 ~~~~~~c~~~~~--~~~F~~~~~~~~~~l~~~~~-~~~~f~~~-----~~~~vYgLaQCt~DLs~~dC~~CL~~a~~~i~  193 (275)
                      ..+++.|+..+.  ++.|+++++.++..|.+.++ ++.+|++.     +.++||||+||+|||++++|+.||+.++.+++
T Consensus         4 ~~v~~~Cn~~~~t~~s~f~~nl~~ll~~L~~~a~~s~~~~~t~~~~~~~~~~vygl~qC~~Dls~~~C~~Cl~~a~~~~~   83 (108)
T 3a2e_A            4 AFVSSACNTQKIPSGSPFNRNLRAMLADLRQNTAFSGYDYKTSRAGSGGAPTAYGRATCKQSISQSDCTACLSNLVNRIF   83 (108)
T ss_dssp             CEEEEEECSSBCCTTCTHHHHHHHHHHHHHHHGGGTTSEEEEEECCSTTCCCEEEEEEECTTSCHHHHHHHHHHHHTTHH
T ss_pred             ceeeeecCCCccCCCChHHHHHHHHHHHHHhhCccccCCceEeeccCCCCceEEEEEEEcCCCCHHHHHHHHHHHHHHHH
Confidence            356778987665  67899999999999977654 33345432     35799999999999999999999999999999


Q ss_pred             hhCCCCcceEEEcceeEEEEecccC
Q 044908          194 EECVGSVSGQIYLDRCFISYSYFPH  218 (275)
Q Consensus       194 ~~C~~~~ggrv~~~~C~lRYe~~~F  218 (275)
                      ++|++++||+||+++|+||||+|+|
T Consensus        84 ~~C~~~~g~~i~~~~C~lRY~~~~F  108 (108)
T 3a2e_A           84 SICNNAIGARVQLVDCFIQYEQRSF  108 (108)
T ss_dssp             HHTTSBSSEEEEETTEEEEEESSCC
T ss_pred             HHCCCCceEEEECCCEEEEEeCCcC
Confidence            9999999999999999999999998

>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}

Probab=95.81  E-value=0.0019  Score=40.94  Aligned_cols=33  Identities=30%  Similarity=0.424  Sum_probs=14.6

Q ss_pred             CCCCcEEEEeehHHHHH-HHHHHHHHHHHhhCCC
Q 044908          239 SNTGKTVAIVLGGVAAL-ALGFIFLSFLRSCGDK  271 (275)
Q Consensus       239 ~~~~~iiaivv~~v~~v-~~~~~~~~~~r~~~~~  271 (275)
                      +++..|.+.||+.++++ ++....++++|||+++
T Consensus         7 s~~~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~   40 (44)
T 2l2t_A            7 ARTPLIAAGVIGGLFILVIVGLTFAVYVRRKSIK   40 (44)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred             CCcceEEEeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence            34444555555544443 3333334444544433

>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A

Probab=95.72  E-value=0.0016  Score=41.26  Aligned_cols=27  Identities=19%  Similarity=0.400  Sum_probs=13.3

Q ss_pred             EEEEeehHHHHHHHHHHHHHHHHhhCC
Q 044908          244 TVAIVLGGVAALALGFIFLSFLRSCGD  270 (275)
Q Consensus       244 iiaivv~~v~~v~~~~~~~~~~r~~~~  270 (275)
                      |+++||++++++++..+.++++|||+.
T Consensus        14 Ia~~vVGvll~vi~~l~~~~~~RRR~~   40 (44)
T 2jwa_A           14 IISAVVGILLVVVLGVVFGILIKRRQQ   40 (44)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred             hHHHHHHHHHHHHHHHHHHhheehhhh
Confidence            566777754444333333444444443

>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}

Probab=95.53  E-value=0.0046  Score=39.23  Aligned_cols=32  Identities=13%  Similarity=0.072  Sum_probs=13.6

Q ss_pred             CCcEEEEeehHHHHH-HHHHHHHHHHHhhCCCC
Q 044908          241 TGKTVAIVLGGVAAL-ALGFIFLSFLRSCGDKD  272 (275)
Q Consensus       241 ~~~iiaivv~~v~~v-~~~~~~~~~~r~~~~~~  272 (275)
                      +..|.+.||+.++++ ++++..++++|||++|+
T Consensus        10 ~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~~   42 (44)
T 2ks1_B           10 IPSIATGMVGALLLLLVVALGIGLFMRRRHIVR   42 (44)
T ss_dssp             SSSSTHHHHHHHHHHHHHHHHHHHHHHTTTCCS
T ss_pred             cceEEeehhHHHHHHHHHHHHHHHHhhhhHhhc
Confidence            333444455434433 33333444445544433

>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A

Probab=93.87  E-value=0.0074  Score=37.07  Aligned_cols=28  Identities=29%  Similarity=0.347  Sum_probs=16.4

Q ss_pred             CCCCcEEEEeehHHHHHHHHH-HHHHHHH
Q 044908          239 SNTGKTVAIVLGGVAALALGF-IFLSFLR  266 (275)
Q Consensus       239 ~~~~~iiaivv~~v~~v~~~~-~~~~~~r  266 (275)
                      -+.+.|..||+++++.+++++ +.++++|
T Consensus         8 ls~GaIAGiVvG~v~gv~li~~l~~~~~r   36 (38)
T 2k1k_A            8 LTGGEIVAVIFGLLLGAALLLGILVFRSR   36 (38)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCceeeeehHHHHHHHHHHHHHHHHee
Confidence            345567778888777664444 3344443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00