Citrus Sinensis ID: 044940

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220------
Protein Sequence
MQERSRILPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNLEDGEDIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKDNSPHNGCWIMHEYTMNASLLPQNHHCSSDCVLCRLRKNGGQSVGIKDSRKKIKIDKQVEDNDHQPTGKSNSRKRLTPIDDATYPHLADDKFLVSNELVYTD
Secondary Structure (PSIPRED)
cccccccccccccccccHHHHHHHHHHHHHcccccccccccEEEEEEcccccccccccccccccccccccEEEEcccccccccccccccccccccccccccccEEEcccccEEEEEEEEEEEEccccccccccEEEEEEcccccccccccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccHHHHHHHHHHHHHcccccccccEEEEEEEccccccccccccHccccHHccccEEEEEccccccccccccccccccccEEEEcccccEEEccccccEEEEEEEEEEEcccccccccEEEEEEEEccccccccccccccEEEEEEEEccccccccccccccccccHccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mqersrilpvgckflpsdeQLVHYYLFNKisgiptpfaeyfvkdvdlydfdepwdiwkrfggtnledgedIYFFTRLKKksingsridrkvgsgawqgeaAGKLVRscnfnrpigskkrfryekdnsphngcwIMHEYTmnasllpqnhhcssdcvlcrlrknggqsvgikdsrkkikidkqvedndhqptgksnsrkrltpiddatyphladdkflvsnelvytd
Flexible Loop (DISEMBL)
mqersrilpvgckflpSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFggtnledgeDIYFFTRlkkksingsridrkvgsgawqgeaagklvrscnfnrpigskkrfryeKDNSPHNGCWIMHEYTMNASLLPQNHHCSSDCVLCRLRKnggqsvgikdsrkkikidkqvedndhqptgksnsrkrltpiddatyphladdkflvsnelvytd
Low Complexity Region (SEG)
MQERSRILPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNLEDGEDIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKDNSPHNGCWIMHEYTMNASLLPQNHHCSSDCVLCRLRKNGGQSVGikdsrkkikidkQVEDNDHQPTGKSNSRKRLTPIDDATYPHLADDKFLVSNELVYTD
Disordered region (IsUnstruct)
******ILPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNLEDGEDIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEK**SPHNGCWIMHEYTMNASLLPQNHHCSSDCVLCRLRKN********************************************YPHLADDKFLVSN******
Disordered Region (DISOPRED)
*****RI**VGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNLEDGEDIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKDNSPHNGCWIMHEYT***************CVLCRLR*****************************************************************
Disordered Region (DISEMBL)
MQERSRILPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNLEDGEDIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKDNSPHNGCWIMHEYTMNASLLPQNHHCSSDCVLCRLRKNGGQSVGIKDSRKKIKIDKQVE************RKRLTPIDDATYPHLADDKFLVSNELVYTD
Disordered Region (DISPRO)
******ILPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNLEDGEDIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKDNSPHNGCWIMHEYTMNASLLPQNHHCSSDCVLCRLRKNGG*************************************************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQERSRILPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNLEDGEDIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKDNSPHNGCWIMHEYTMNASLLPQNHHCSSDCVLCRLRKNGGQSVGIKDSRKKIKIDKQVEDNDHQPTGKSNSRKRLTPIDDATYPHLADDKFLVSNELVYTD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	226	2.2.26 [Sep-21-2011]
Q52QH4	318	NAC domain-containing pro	yes	no	0.712	0.506	0.342	1e-16
Q7F2L3	303	NAC domain-containing pro	no	no	0.654	0.488	0.359	4e-16
Q9SV87	341	Protein BEARSKIN1 OS=Arab	no	no	0.641	0.425	0.350	2e-15
Q93VY3	297	NAC domain-containing pro	no	no	0.849	0.646	0.305	3e-15
Q53NF7	329	NAC domain-containing pro	no	no	0.654	0.449	0.352	4e-15
O49255	268	NAC transcription factor	no	no	0.663	0.559	0.347	4e-15
Q9C598	283	Protein ATAF2 OS=Arabidop	no	no	0.805	0.643	0.302	6e-15
Q8H4S4	425	NAC transcription factor	no	no	0.818	0.435	0.287	7e-15
Q9C878	305	Protein BEARSKIN1 OS=Arab	no	no	0.646	0.478	0.356	8e-15
Q39013	289	NAC domain-containing pro	no	no	0.663	0.519	0.325	2e-14

>sp|Q52QH4|NAC68_ORYSJ NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1

 Score = 86.3 bits (212), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 91/181 (50%), Gaps = 20/181 (11%)

Query: 8   LPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNLED 67
           LP G +F P+DE+LV +YL  K++  P P     + +VDLY  D PWD+ ++     L  
Sbjct: 21  LPPGFRFHPTDEELVVHYLCRKVARQPLPVP--IIAEVDLYKLD-PWDLPEK----ALFG 73

Query: 68  GEDIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKDNS 127
            ++ YFFT   +K  NGSR +R  G G W+   A K V      R +G KK   +    +
Sbjct: 74  RKEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKALVFYSGKA 133

Query: 128 PHN--GCWIMHEYTM-NASLLPQNHHCSS---DCVLCRLRKNGGQSVGIKDSRKKIKIDK 181
           P      WIMHEY + +A   P     S    + VLCRL          K++ +K+K+++
Sbjct: 134 PRGVKTDWIMHEYRLADADRAPGGKKGSQKLDEWVLCRLYNK-------KNNWEKVKLEQ 186

Query: 182 Q 182
           Q
Sbjct: 187 Q 187

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7F2L3|NAC48_ORYSJ NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1

 Score = 84.7 bits (208), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/164 (35%), Positives = 85/164 (51%), Gaps = 16/164 (9%)

Query: 8   LPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNLED 67
           LP G +F P+DE+LV +YL  + +G+P   A   + ++DLY FD PW + +      L  
Sbjct: 9   LPPGFRFHPTDEELVMHYLCRRCAGLP--IAVPIIAEIDLYKFD-PWQLPR----MALYG 61

Query: 68  GEDIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKDNS 127
            ++ YFF+   +K  NGSR +R  GSG W+   A K V S    +P+  KK   +    +
Sbjct: 62  EKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVGS---PKPVAIKKALVFYAGKA 118

Query: 128 P--HNGCWIMHEYTM---NASLLPQNHHCSSDCVLCRL-RKNGG 165
           P      WIMHEY +   + S   +N     D VLCR+  K GG
Sbjct: 119 PKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGG 162

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9SV87|BRN2_ARATH Protein BEARSKIN1 OS=Arabidopsis thaliana GN=BRN2 PE=2 SV=1

 Score = 82.8 bits (203), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 81/157 (51%), Gaps = 12/157 (7%)

Query: 8   LPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKR--FGGTNL 65
           +P G +F P+DE+L+HYYL  KIS     F    +++VDL    EPWD+ +R   G T  
Sbjct: 9   VPPGFRFHPTDEELLHYYLKKKISY--QKFEMEVIREVDLNKL-EPWDLQERCKIGST-- 63

Query: 66  EDGEDIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKD 125
               + YFF+   +K   GSR +R   +G W+     K +R  N  + IG +K   + K 
Sbjct: 64  -PQNEWYFFSHKDRKYPTGSRTNRATHAGFWKATGRDKCIR--NSYKKIGMRKTLVFYKG 120

Query: 126 NSPHNGC--WIMHEYTMNASLLPQNHHCSSDCVLCRL 160
            +PH     WIMHEY +  +  PQ +      V+CR+
Sbjct: 121 RAPHGQKTDWIMHEYRLEDADDPQANPSEDGWVVCRV 157

Transcription activator. Together with BRN1 and SMB, regulates cellular maturation of root cap. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q93VY3|NAC72_ARATH NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1

 Score = 81.6 bits (200), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 21/213 (9%)

Query: 8   LPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNLED 67
           LP G +F P+DE+L+  YL  K++G    F+   + D+DLY FD PWD+  +     L  
Sbjct: 14  LPPGFRFYPTDEELLVQYLCRKVAGYH--FSLQVIGDIDLYKFD-PWDLPSK----ALFG 66

Query: 68  GEDIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKDNS 127
            ++ YFF+   +K  NGSR +R  GSG W+     K++ +    R +G KK   +    +
Sbjct: 67  EKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITAD--GRRVGIKKALVFYAGKA 124

Query: 128 PHN--GCWIMHEYTMNASLLPQNHHCSSDCVLCRLRKNGGQSVGIKDSRKKIKIDKQVED 185
           P      WIMHEY +             D VLCR+ K          S+++     Q   
Sbjct: 125 PKGTKTNWIMHEYRLIEHSRSHGSSKLDDWVLCRIYKK------TSGSQRQAVTPVQACR 178

Query: 186 NDHQPTGKSNSRKRLTPIDDA--TYPHLADDKF 216
            +H   G S+S    + +DD   ++P + D  F
Sbjct: 179 EEHSTNGSSSSSS--SQLDDVLDSFPEIKDQSF 209

Transcription factors that bind specifically to the 5'-CATGTG-3' motif.

Arabidopsis thaliana (taxid: 3702)

>sp|Q53NF7|NAC71_ORYSJ NAC domain-containing protein 71 OS=Oryza sativa subsp. japonica GN=NAC71 PE=2 SV=1

 Score = 81.6 bits (200), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/170 (35%), Positives = 82/170 (48%), Gaps = 22/170 (12%)

Query: 8   LPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNLED 67
           LP G +F P+D++LV YYL  K  G+  P A   + +VDLY F+ PWD+ +R  G   E 
Sbjct: 9   LPPGFRFHPTDDELVMYYLCRKCGGL--PLAAPVIAEVDLYKFN-PWDLPERAMGGEKE- 64

Query: 68  GEDIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKDNS 127
               YFF+   +K  NG R +R  G+G W+   A K V S    R +  KK   +     
Sbjct: 65  ---WYFFSPRDRKYPNGQRPNRAAGTGYWKATGADKPVGS---PRAVAIKKALVFYAGKP 118

Query: 128 PHN--GCWIMHEY-------TMNASLLPQNHHCS---SDCVLCRLRKNGG 165
           P      WIMHEY       +  A  L ++ H +    D VLCR+    G
Sbjct: 119 PKGVKTNWIMHEYRLADVDRSAAARKLSKSSHNALRLDDWVLCRIYNKKG 168

Oryza sativa subsp. japonica (taxid: 39947)

>sp|O49255|NAC29_ARATH NAC transcription factor 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1

 Score = 81.6 bits (200), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/167 (34%), Positives = 84/167 (50%), Gaps = 17/167 (10%)

Query: 8   LPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNLED 67
           LP G +F P+DE+L+ YYL N+    P P +   + +VD+Y FD PW + ++      E 
Sbjct: 9   LPPGFRFHPTDEELIVYYLRNQTMSKPCPVS--IIPEVDIYKFD-PWQLPEK-----TEF 60

Query: 68  GE-DIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKDN 126
           GE + YFF+  ++K  NG R +R   SG W+     K + S + N  +G KK   + K  
Sbjct: 61  GENEWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSN--VGVKKALVFYKGR 118

Query: 127 SPH--NGCWIMHEYTMNASLLPQNHHCSS----DCVLCRLRKNGGQS 167
            P      WIMHEY ++ S         S    + VLCR+ K  G S
Sbjct: 119 PPKGIKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYKKRGAS 165

May function in the transition between active cell division and cell expansion.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C598|NAC81_ARATH Protein ATAF2 OS=Arabidopsis thaliana GN=NAC081 PE=1 SV=1

 Score = 81.3 bits (199), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 105/218 (48%), Gaps = 36/218 (16%)

Query: 8   LPVGCKFLPSDEQLVHYYLFNKISG--IPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNL 65
           LP G +F P+DE+LV +YL  K +   I  P     + ++DLY F+ PW++       +L
Sbjct: 7   LPAGFRFHPTDEELVKFYLCRKCASEQISAPV----IAEIDLYKFN-PWEL----PEMSL 57

Query: 66  EDGEDIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKD 125
              ++ YFF+   +K  NGSR +R  G+G W+   A K +      + +G KK   +   
Sbjct: 58  YGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKP---KTLGIKKALVFYAG 114

Query: 126 NSPHN--GCWIMHEYTM-----NASLLPQNHHCSSDCVLCRLRKNGGQSVGIKDSRKKIK 178
            +P      WIMHEY +     +AS+  +N+    D VLCR+              KK  
Sbjct: 115 KAPKGIKTNWIMHEYRLANVDRSASVNKKNNLRLDDWVLCRIY------------NKKGT 162

Query: 179 IDKQVEDNDHQPTGKSNSRKRLTPID--DATYPHLADD 214
           ++K     D +P   + + +  +P D  D+TYP L +D
Sbjct: 163 MEKYFP-ADEKPRTTTMAEQSSSPFDTSDSTYPTLQED 199

Arabidopsis thaliana (taxid: 3702)

>sp|Q8H4S4|NAC10_ORYSJ NAC transcription factor ONAC010 OS=Oryza sativa subsp. japonica GN=ONAC010 PE=2 SV=1

 Score = 80.9 bits (198), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 17/202 (8%)

Query: 8   LPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNLED 67
           LP G +F P+DE+LV +YL  K + +P P     + +VDLY FD PWD+ ++    N  +
Sbjct: 29  LPPGFRFHPTDEELVVHYLKKKAASVPLPVT--IIAEVDLYKFD-PWDLPEK---ANFGE 82

Query: 68  GEDIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRP-IGSKKRFRYEKDN 126
            ++ YFF+   +K  NG+R +R   SG W+     K + S    R  +G KK   + +  
Sbjct: 83  -QEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIMSSGSTREKVGVKKALVFYRGK 141

Query: 127 SPHN--GCWIMHEYTMNASLLPQNHHCSSDCVLCRLRKNGGQSVGIKDSRKKIKIDKQVE 184
            P      WIMHEY +  +        SS   +   R+      G       +++D  V 
Sbjct: 142 PPKGVKTNWIMHEYRLTDT-------SSSAAAVATTRRPPPPITGGSKGAVSLRLDDWVL 194

Query: 185 DNDHQPTGKSNSRKRLTPIDDA 206
              ++ T K+ + +R    +D+
Sbjct: 195 CRIYKKTNKAGAGQRSMECEDS 216

Transcription factor of the NAC family associated with male fertility. Involved in anther development, but not in senescence. Reduced expression of NAC5 via RNAi leads to male-sterility.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9C878|BRN1_ARATH Protein BEARSKIN1 OS=Arabidopsis thaliana GN=BRN1 PE=2 SV=1

 Score = 80.5 bits (197), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 80/157 (50%), Gaps = 11/157 (7%)

Query: 8   LPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNLED 67
           +P G +F P+DE+L+HYYL  KIS     F    +K+VDL    EPWD+  R    +   
Sbjct: 8   VPPGFRFHPTDEELLHYYLKKKISY--EKFEMEVIKEVDLNKI-EPWDLQDRCKIGSTPQ 64

Query: 68  GEDIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKDNS 127
            E  YFF+   +K   GSR +R   SG W+     K +R  N  + IG +K   + K  +
Sbjct: 65  NE-WYFFSHKDRKYPTGSRTNRATHSGFWKATGRDKCIR--NSYKKIGMRKTLVFYKGRA 121

Query: 128 PHNGC--WIMHEYTMNASLLPQNHHCSSDCVLCRLRK 162
           PH     WIMHEY +  +   ++  C    V+CR+ K
Sbjct: 122 PHGQKTDWIMHEYRIEDT---EDDPCEDGWVVCRVFK 155

Transcription activator. Together with SMB and BRN2, regulates cellular maturation of root cap. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39013|NAC2_ARATH NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2

 Score = 79.0 bits (193), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 81/166 (48%), Gaps = 16/166 (9%)

Query: 8   LPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNLED 67
           LP G +F P+DE+LV +YL  K +      A   + ++DLY +D PW++     G  L  
Sbjct: 7   LPPGFRFHPTDEELVMHYLCRKCAS--QSIAVPIIAEIDLYKYD-PWEL----PGLALYG 59

Query: 68  GEDIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKDNS 127
            ++ YFF+   +K  NGSR +R  GSG W+   A K +      +P+G KK   +    +
Sbjct: 60  EKEWYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPI---GLPKPVGIKKALVFYAGKA 116

Query: 128 P--HNGCWIMHEYTM----NASLLPQNHHCSSDCVLCRLRKNGGQS 167
           P      WIMHEY +     +    +N     D VLCR+    G +
Sbjct: 117 PKGEKTNWIMHEYRLADVDRSVRKKKNSLRLDDWVLCRIYNKKGAT 162

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	226
255584644	376	NAC domain-containing protein, putative	0.668	0.401	0.482	2e-29
255545410	363	transcription factor, putative [Ricinus	0.707	0.440	0.45	6e-28
357512399	210	NAC domain-containing protein [Medicago	0.650	0.7	0.417	7e-28
357439789	325	NAC domain protein [Medicago truncatula]	0.641	0.446	0.422	1e-27
449448878	306	PREDICTED: NAC domain-containing protein	0.823	0.607	0.394	3e-27
255580284	508	transcription factor, putative [Ricinus	0.898	0.399	0.337	4e-26
449442783	301	PREDICTED: NAC domain-containing protein	0.787	0.591	0.392	5e-26
255577785	328	transcription factor, putative [Ricinus	0.853	0.588	0.369	2e-24
255577787	316	conserved hypothetical protein [Ricinus	0.747	0.534	0.372	5e-24
449457267	211	PREDICTED: NAC domain-containing protein	0.765	0.819	0.382	3e-23

>gi|255584644|ref|XP_002533045.1| NAC domain-containing protein, putative [Ricinus communis] gi|223527164|gb|EEF29335.1| NAC domain-containing protein, putative [Ricinus communis]

 Score =  134 bits (337), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/168 (48%), Positives = 102/168 (60%), Gaps = 17/168 (10%)

Query: 1   MQERSRILPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRF 60
           MQ+    +PVG +F P+D +LV YYLFNK++G   P     V D +LY  DEP  +W++F
Sbjct: 1   MQQLKDQIPVGYRFNPTDCELVGYYLFNKLNGCLLPIDNMLVADTNLYGKDEPLQLWEKF 60

Query: 61  GG--TNLEDGEDIYFFTRLKKKSINGSRIDRKVGSGA-WQGEAAGKLVR-SCNFNRPI-G 115
           GG  +   DGE IY FT+LKKK   GSRI R VG+G  W G  AGK VR   N  + I G
Sbjct: 61  GGNCSFYSDGE-IYLFTKLKKK---GSRILRSVGAGGTWHGVDAGKPVRIKTNRGQLIEG 116

Query: 116 SKKRFRYEKDNSPHNGCWIMHEYTMNASLLPQNHHCSSDCVLCRLRKN 163
           +KK F Y   NS H+GCWIMHE+++           S D VLCRL+KN
Sbjct: 117 TKKCFSYRNPNSIHDGCWIMHEFSL--------FDISYDWVLCRLKKN 156

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545410|ref|XP_002513765.1| transcription factor, putative [Ricinus communis] gi|223546851|gb|EEF48348.1| transcription factor, putative [Ricinus communis]

 Score =  129 bits (325), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 81/180 (45%), Positives = 109/180 (60%), Gaps = 20/180 (11%)

Query: 8   LPVGCKFLPSDEQLVHYYLFNKIS--GIPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNL 65
           + VG +F P DE+L+ YYL +KI+   +P P     VKD DLY  +EPW+IW  FGG NL
Sbjct: 7   MQVGVRFRPLDEELLMYYLSHKINNLSLPNPCP---VKDCDLYGKNEPWEIWDYFGGQNL 63

Query: 66  EDGEDIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKD 125
            D E +YFFT+LK+KS + SRI R VG+G W G+ +GK V      + IG  K+F Y+K 
Sbjct: 64  MDVEFLYFFTQLKRKSSSSSRILRTVGTGTWHGDTSGKPVLDRKTKKVIGLIKKFHYKKP 123

Query: 126 NSPHNGCWIMHEYTMNASLLPQNHHCSSDCVLCRLRKNGGQSVGIKDSRKKIKIDKQVED 185
            S HNG W+M EY    SL+ Q    SSDCVLC L+ N       K   K+ +++ + +D
Sbjct: 124 KSAHNGGWLMREY----SLVGQ----SSDCVLCCLKMN-------KSGEKRNRLEAETKD 168

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357512399|ref|XP_003626488.1| NAC domain-containing protein [Medicago truncatula] gi|355501503|gb|AES82706.1| NAC domain-containing protein [Medicago truncatula]

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 63/151 (41%), Positives = 97/151 (64%), Gaps = 4/151 (2%)

Query: 14  FLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDF-DEPWDIWKRFGGTNLEDGEDIY 72
           F P+D++L+  +L+N+I   P P     + D +L+     PW+IW+ F  ++   G+D+Y
Sbjct: 11  FTPTDDELIRSFLYNRIHNNPVP-NYITILDYELFGIVKNPWEIWEEFAPSHSYCGKDLY 69

Query: 73  FFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKDNSPHNGC 132
           FFT LKKKS    R+ R +GSG W+GE  GK + +   N+ +G KKRFR+ K N+ H+G 
Sbjct: 70  FFTTLKKKSATSKRLIRTIGSGTWEGEDTGKGIVAKETNKVLGIKKRFRFGKSNTFHDGA 129

Query: 133 WIMHEYTMNASLLPQNHHCSSDCVLCRLRKN 163
           WI+HEY ++ SL+  N+  +++ VLCR RKN
Sbjct: 130 WILHEYNLDKSLI--NNTLANNYVLCRFRKN 158

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357439789|ref|XP_003590172.1| NAC domain protein [Medicago truncatula] gi|355479220|gb|AES60423.1| NAC domain protein [Medicago truncatula]

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/149 (42%), Positives = 99/149 (66%), Gaps = 4/149 (2%)

Query: 16  PSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLY-DFDEPWDIWKRFGGTNLEDGEDIYFF 74
           P+D++L+  +L+NKI   P P     + + DL+     PW+IW+ FG +N   G+D+YFF
Sbjct: 13  PTDDELLQQFLYNKIHNKPLP-NHITILEHDLFGTAKNPWEIWEEFGTSNSNRGKDLYFF 71

Query: 75  TRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKDNSPHNGCWI 134
           T LKKKS   SR+ R +G G W+GE +GK + + + N+ +G KKRFR+EK ++  +G WI
Sbjct: 72  TTLKKKSATSSRVVRTIGLGRWEGEDSGKNIFAKDKNQILGMKKRFRFEKSDTSQDGGWI 131

Query: 135 MHEYTMNASLLPQNHHCSSDCVLCRLRKN 163
           +HEY+++ SL+  ++   ++ VLCR RKN
Sbjct: 132 LHEYSLHNSLI--SNPLDNNYVLCRFRKN 158

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449448878|ref|XP_004142192.1| PREDICTED: NAC domain-containing protein 68-like [Cucumis sativus] gi|449516019|ref|XP_004165045.1| PREDICTED: NAC domain-containing protein 68-like [Cucumis sativus]

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/213 (39%), Positives = 130/213 (61%), Gaps = 27/213 (12%)

Query: 10  VGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNLEDGE 69
           VG KF P+D+QL+HY L  KI G   P+ +  V D DLY   EPW+IW+ FGG    DGE
Sbjct: 16  VGVKFRPTDQQLLHY-LHCKIYG--QPYFQGAVFDFDLYGGVEPWEIWQSFGGI---DGE 69

Query: 70  DIYFFTRLKKKSIN----GSRIDRKVG--SGAWQGE-AAGKLVRSCNFNRPIGSKKRFRY 122
           D+YFFT+LK+ + N     + I+RK+G  +G W GE +A  +  + +  + IG +KRFRY
Sbjct: 70  DLYFFTKLKRSTTNSGNLSTHINRKIGLVNGTWSGENSASPIYVNKDHEQIIGYRKRFRY 129

Query: 123 EKDN-SPHNGCWIMHEYTMNASLLPQNHHCSSDCVLCRLRKNG-------GQSVGIKDSR 174
           E ++   H+G WIMHEY+++   L +      + VLCR+RKN         +S   + ++
Sbjct: 130 ENESLEEHHGEWIMHEYSLHPDYL-RCEGVDPNYVLCRIRKNQRAKRKLETESELKQSNK 188

Query: 175 KKIKIDKQVEDNDHQPTGKSNSRKR---LTPID 204
           K++K+ +++ +N+ +P  K+ ++KR   L PID
Sbjct: 189 KRMKV-REISNNE-RPKAKTKTKKRCDELQPID 219

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255580284|ref|XP_002530971.1| transcription factor, putative [Ricinus communis] gi|223529447|gb|EEF31406.1| transcription factor, putative [Ricinus communis]

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 77/228 (33%), Positives = 121/228 (53%), Gaps = 25/228 (10%)

Query: 3   ERSRILPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFGG 62
           + + ILP G +F P+D++LV +YL N+++  P    +YF+ ++D+Y   EPW IW   G 
Sbjct: 8   QEALILPPGYRFDPTDQELVLHYLLNRVARKPLS-CQYFISEIDIYGDMEPWQIWDSLGK 66

Query: 63  TNLEDGEDIYFFTRLKKKSINGSRIDRKVGS--GAWQGEAAGKLVRSCNFNRPIGSKKRF 120
               D + +Y FT LKK++ NGS I R++GS  G+W GE +GK  +    N    ++KRF
Sbjct: 67  A---DNDVLYVFTPLKKRAANGSTILRRIGSNGGSWHGEDSGKEFK---LNGVKWTQKRF 120

Query: 121 RYE-KDNSPHNGCWIMHEYTMNASLLPQNHHCSSD----CVLCRLRKNGGQSVGIKDSRK 175
           RYE +   PH+G W+M EY+++ SL+ +     +D     VLCR++KN           +
Sbjct: 121 RYENRKCKPHDGAWLMQEYSLDQSLVNKIKEKRNDDNEIIVLCRIKKN-----------E 169

Query: 176 KIKIDKQVEDNDHQPTGKSNSRKRLTPIDDATYPHLADDKFLVSNELV 223
           +IK  +Q E    +     N   R        +  L  D F+  N+ V
Sbjct: 170 RIKKSRQSEGGGDEALYADNGVDRTAEASKIGFKRLRIDHFVSENQEV 217

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449442783|ref|XP_004139160.1| PREDICTED: NAC domain-containing protein 68-like [Cucumis sativus] gi|449485396|ref|XP_004157155.1| PREDICTED: NAC domain-containing protein 68-like [Cucumis sativus]

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 84/214 (39%), Positives = 122/214 (57%), Gaps = 36/214 (16%)

Query: 10  VGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNLEDGE 69
           VG KF P+D+QL+HY L  KI G   P+ +  V D DLY   EPW+IW+ FGG    DGE
Sbjct: 20  VGLKFRPTDQQLLHY-LHCKIYG--QPYFQGAVFDFDLYGGVEPWEIWQSFGGI---DGE 73

Query: 70  DIYFFTRLKKKSIN----GSRIDRKVG--SGAWQGE-AAGKLVRSCNFNRPIGSKKRFRY 122
           D+YFFT+LK+ + N     + ++RK+G  +G W GE +A  +  + N    IG +KRFRY
Sbjct: 74  DLYFFTKLKRSTTNCGNLSTHVNRKIGLVNGTWSGENSASPIYVNENCEEIIGYRKRFRY 133

Query: 123 EKDN-SPHNGCWIMHEYTMNASLLPQNHHCSSDCVLCRLRKNGGQSVGIKDSRKKIKIDK 181
           E ++   H+G WIMHEY+M+   L +     S+ VLCR+RKN       +  RK ++I  
Sbjct: 134 ENESLEEHHGEWIMHEYSMHQRYL-RCEGVDSNYVLCRMRKNE------RVKRKLLEI-- 184

Query: 182 QVEDNDHQPTGKSNSRKRLTPIDDATYPHLADDK 215
                  Q   K  ++KR+        PH++D++
Sbjct: 185 -------QGEAKQPNKKRIKA------PHISDNE 205

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255577785|ref|XP_002529767.1| transcription factor, putative [Ricinus communis] gi|223530765|gb|EEF32633.1| transcription factor, putative [Ricinus communis]

 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/222 (36%), Positives = 112/222 (50%), Gaps = 29/222 (13%)

Query: 1   MQERSRILPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDV-DLYDFDEPWDIWKR 59
           M++    LP GC+F P+DE+LV  YLF K + +     E  V  V DLY   EPW++W +
Sbjct: 1   MEQFLATLPSGCRFKPTDEELVAIYLFKKTNNLNLSDVENMVVPVCDLYGDKEPWELWDQ 60

Query: 60  FGGTNLEDGEDIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGK----LVRSCNFNRPI- 114
           F    L    D++FFT LKKK    SRI R+VG G W GE  G+    LV   N  + + 
Sbjct: 61  FAQNQLFINGDLFFFTELKKKP-KSSRILRRVGKGTWHGENKGEPVNVLVDVGNAKQLMI 119

Query: 115 -GSKKRFRYEKDNSPHNGCWIMHEYTMNASLLPQNHHCSSDCVLCRLRKN----GGQSV- 168
             +KKRF Y   NS H+  WI+HE++++        + S++ VLCRLR N       SV 
Sbjct: 120 QATKKRFSYRNQNSAHHCRWILHEFSLD--------NVSTNWVLCRLRNNHVSDSDNSVL 171

Query: 169 ---GIKDSRKKIKIDKQVEDNDHQPTGKSNSRKRLTPIDDAT 207
               +   RK  + D Q  + +  P     S KRL   D  T
Sbjct: 172 VLERVSSKRKNAEADDQCPNTEIVP-----SEKRLRTSDKCT 208

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255577787|ref|XP_002529768.1| conserved hypothetical protein [Ricinus communis] gi|223530766|gb|EEF32634.1| conserved hypothetical protein [Ricinus communis]

 Score =  116 bits (291), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/196 (37%), Positives = 100/196 (51%), Gaps = 27/196 (13%)

Query: 1   MQERSRILPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDV-DLYDFDEPWDIWKR 59
           M +    LP GC+F P+DE+LV  YLF K   +     E  +  V DLY   EPW++W +
Sbjct: 1   MDQFLATLPTGCRFSPTDEELVAMYLFKKTKNLNLSDVENMIVPVCDLYGDKEPWELWDQ 60

Query: 60  FGGTNLEDGEDIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGS--- 116
           F    L    D+YFFT LKKK    SRI R+VG G W GE   + V   N    +GS   
Sbjct: 61  FSQNQLFTNGDLYFFTELKKKP-KSSRISRRVGKGTWHGENKREPV---NVLLDVGSAKQ 116

Query: 117 ------KKRFRYEKDNSPHNGCWIMHEYTMNASLLPQNHHCSSDCVLCRLRKNGGQSVGI 170
                 KKRF Y   NS H+  WI+HE++++        + S++ VLCRLR N      +
Sbjct: 117 LMIQATKKRFNYRNQNSAHHCRWILHEFSLD--------NVSTNWVLCRLRNN-----HV 163

Query: 171 KDSRKKIKIDKQVEDN 186
            DS   + + ++V  N
Sbjct: 164 SDSVNSVLVLERVSSN 179

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449457267|ref|XP_004146370.1| PREDICTED: NAC domain-containing protein 90-like [Cucumis sativus]

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/188 (38%), Positives = 108/188 (57%), Gaps = 15/188 (7%)

Query: 7   ILPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNLE 66
           ++PVG  F P++E+L+ YYL+NK+ G  TP     +  +DLY   EP  IW++  G    
Sbjct: 5   LIPVGYIFCPTEEELLGYYLYNKVLGGQTP--PLVLPVIDLYT-QEPSQIWQQCRGV--- 58

Query: 67  DGEDIYFFTRLKKKSINGSRIDRKVGS--GAWQGEAAGKLVRSCNF-NRPIGSKKRFRYE 123
           D +DIYFFT L+KK    SRI RK+GS  G W GE   + V S    N  +G+ KRFRYE
Sbjct: 59  DNQDIYFFTTLQKKK---SRIIRKIGSNGGTWSGENKPQQVFSSIIDNLLLGTMKRFRYE 115

Query: 124 KDNSPHNGCWIMHEYTMNASLLPQNHHCSSDCVLCRLRKNGGQS--VGIKDSRKKIKIDK 181
           K     +  WIM+EYT+N S++P+        VLC +RK   +S  + +  ++++     
Sbjct: 116 KSQVKEDCTWIMYEYTLNPSIVPEG-LVHDSYVLCMIRKKIVKSEKMVMASNKRRAMTSM 174

Query: 182 QVEDNDHQ 189
            V++ +H+
Sbjct: 175 HVDNQNHK 182

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	226
TAIR|locus:2095908	359	NAC047 "NAC domain containing	0.601	0.378	0.355	3.1e-19
TAIR|locus:2122804	341	NAC070 "NAC domain containing	0.654	0.434	0.351	6e-18
TAIR|locus:2196641	305	NAC015 "NAC domain containing	0.637	0.472	0.358	7.5e-18
TAIR|locus:2179877	252	NAC083 "NAC domain containing	0.650	0.583	0.364	9.5e-18
TAIR|locus:2167923	348	NAC101 "NAC-domain protein 101	0.646	0.419	0.367	1.6e-17
TAIR|locus:2007166	268	NAP "NAC-like, activated by AP	0.663	0.559	0.347	5.3e-17
TAIR|locus:2124014	314	RD26 "RESPONSIVE TO DESICCATIO	0.867	0.624	0.292	1.1e-16
TAIR|locus:2097720	479	NAC045 "NAC domain containing	0.641	0.302	0.366	1.1e-16
TAIR|locus:2089764	246	NAC057 "NAC domain containing	0.889	0.817	0.296	2.9e-16
TAIR|locus:2016049	324	VND7 "vascular related NAC-dom	0.646	0.450	0.352	3.3e-16

TAIR|locus:2095908 NAC047 "NAC domain containing protein 47" [Arabidopsis thaliana (taxid:3702)]

 Score = 207 (77.9 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
 Identities = 54/152 (35%), Positives = 79/152 (51%)

Query:     8 LPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKR--FGGTNL 65
             LP G +F P+DE+L+ +YL  K+S  P P +   + DVD+Y  D PWD+  +  FG    
Sbjct:    10 LPPGFRFHPTDEELILHYLRKKVSSSPVPLS--IIADVDIYKSD-PWDLPAKAPFGE--- 63

Query:    66 EDGEDIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCN---FNRPIGSKKRFRY 122
                ++ YFF+   +K  NG+R +R   SG W+     KL+   N   F+  IG KK   +
Sbjct:    64 ---KEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKLIAVPNGEGFHENIGIKKALVF 120

Query:   123 EKDNSPHN--GCWIMHEYTMNASLLPQNHHCS 152
              +   P      WIMHEY +  SL P+  + S
Sbjct:   121 YRGKPPKGVKTNWIMHEYRLADSLSPKRINSS 152

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006865 "amino acid transport" evidence=RCA

GO:0010260 "organ senescence" evidence=RCA

TAIR|locus:2122804 NAC070 "NAC domain containing protein 70" [Arabidopsis thaliana (taxid:3702)]

 Score = 219 (82.2 bits), Expect = 6.0e-18, P = 6.0e-18
 Identities = 57/162 (35%), Positives = 84/162 (51%)

Query:     8 LPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKR--FGGTNL 65
             +P G +F P+DE+L+HYYL  KIS     F    +++VDL    EPWD+ +R   G T  
Sbjct:     9 VPPGFRFHPTDEELLHYYLKKKISY--QKFEMEVIREVDLNKL-EPWDLQERCKIGSTPQ 65

Query:    66 EDGEDIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKD 125
              +    YFF+   +K   GSR +R   +G W+     K +R  N  + IG +K   + K 
Sbjct:    66 NEW---YFFSHKDRKYPTGSRTNRATHAGFWKATGRDKCIR--NSYKKIGMRKTLVFYKG 120

Query:   126 NSPHNGC--WIMHEYTMNASLLPQNHHCSSDCVLCR--LRKN 163
              +PH     WIMHEY +  +  PQ +      V+CR  ++KN
Sbjct:   121 RAPHGQKTDWIMHEYRLEDADDPQANPSEDGWVVCRVFMKKN 162

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0010628 "positive regulation of gene expression" evidence=IEP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IMP

GO:0048829 "root cap development" evidence=IMP

TAIR|locus:2196641 NAC015 "NAC domain containing protein 15" [Arabidopsis thaliana (taxid:3702)]

 Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
 Identities = 57/159 (35%), Positives = 81/159 (50%)

Query:     8 LPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKR--FGGTNL 65
             +P G +F P+DE+L+HYYL  KIS     F    +K+VDL    EPWD+  R   G T  
Sbjct:     8 VPPGFRFHPTDEELLHYYLKKKISY--EKFEMEVIKEVDLNKI-EPWDLQDRCKIGSTPQ 64

Query:    66 EDGEDIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKD 125
              +    YFF+   +K   GSR +R   SG W+     K +R  N  + IG +K   + K 
Sbjct:    65 NEW---YFFSHKDRKYPTGSRTNRATHSGFWKATGRDKCIR--NSYKKIGMRKTLVFYKG 119

Query:   126 NSPHNGC--WIMHEYTMNASLLPQNHHCSSDCVLCRLRK 162
              +PH     WIMHEY +  +   ++  C    V+CR+ K
Sbjct:   120 RAPHGQKTDWIMHEYRIEDT---EDDPCEDGWVVCRVFK 155

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0010628 "positive regulation of gene expression" evidence=IEP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IMP

GO:0048829 "root cap development" evidence=IMP

TAIR|locus:2179877 NAC083 "NAC domain containing protein 83" [Arabidopsis thaliana (taxid:3702)]

 Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
 Identities = 59/162 (36%), Positives = 86/162 (53%)

Query:     8 LPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNLED 67
             LP G +F P+DE+LV  YL  K+   P P +   + + D+   D PWD+     G NLE 
Sbjct:    14 LPPGFRFHPTDEELVVQYLKRKVCSSPLPAS--IIPEFDVCRAD-PWDL----PG-NLE- 64

Query:    68 GEDIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKDNS 127
              ++ YFF+  + K  NG+R +R  GSG W+     K V +   N+ +G KK   + K   
Sbjct:    65 -KERYFFSTREAKYPNGNRSNRATGSGYWKATGIDKRVVTSRGNQIVGLKKTLVFYKGKP 123

Query:   128 PHNGC--WIMHEYTMNASLLPQNHHCSSDCVLCR--LRKNGG 165
             PH     WIMHEY +++S  P +   + + VLCR  L+K  G
Sbjct:   124 PHGSRTDWIMHEYRLSSSP-PSSMGPTQNWVLCRIFLKKRAG 164

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0010089 "xylem development" evidence=RCA;IMP

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0009651 "response to salt stress" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0010150 "leaf senescence" evidence=IMP

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

TAIR|locus:2167923 NAC101 "NAC-domain protein 101" [Arabidopsis thaliana (taxid:3702)]

 Score = 216 (81.1 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 58/158 (36%), Positives = 80/158 (50%)

Query:     8 LPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFG-GTNLE 66
             +P G +F P+DE+LV YYL NK++  P    +  +KDVDLY   EPWDI +  G GT  E
Sbjct:     7 IPPGYRFHPTDEELVDYYLKNKVA-FPGMQVDV-IKDVDLYKI-EPWDIQELCGRGTGEE 63

Query:    67 DGEDIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKDN 126
                + YFF+   KK   G+R +R  GSG W+     K + S      +G +K   + K  
Sbjct:    64 --REWYFFSHKDKKYPTGTRTNRATGSGFWKATGRDKAIYSKQ--ELVGMRKTLVFYKGR 119

Query:   127 SPHN--GCWIMHEYTMNASLLPQNHHCSSDCVLCRLRK 162
             +P+     WIMHEY +        H      V+CR  K
Sbjct:   120 APNGQKSDWIMHEYRLETDENGPPHE--EGWVVCRAFK 155

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0009735 "response to cytokinin stimulus" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0009741 "response to brassinosteroid stimulus" evidence=IEP;RCA

GO:0010089 "xylem development" evidence=RCA;IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0007155 "cell adhesion" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010090 "trichome morphogenesis" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

GO:0045010 "actin nucleation" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2007166 NAP "NAC-like, activated by AP3/PI" [Arabidopsis thaliana (taxid:3702)]

 Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
 Identities = 58/167 (34%), Positives = 84/167 (50%)

Query:     8 LPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNLED 67
             LP G +F P+DE+L+ YYL N+    P P +   + +VD+Y FD PW + ++      E 
Sbjct:     9 LPPGFRFHPTDEELIVYYLRNQTMSKPCPVS--IIPEVDIYKFD-PWQLPEK-----TEF 60

Query:    68 GE-DIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKDN 126
             GE + YFF+  ++K  NG R +R   SG W+     K + S + N  +G KK   + K  
Sbjct:    61 GENEWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSN--VGVKKALVFYKGR 118

Query:   127 SPHN--GCWIMHEYTMNASLLPQNHHCSS----DCVLCRLRKNGGQS 167
              P      WIMHEY ++ S         S    + VLCR+ K  G S
Sbjct:   119 PPKGIKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYKKRGAS 165

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010150 "leaf senescence" evidence=IMP

GO:0009617 "response to bacterium" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=IMP

GO:0009908 "flower development" evidence=IMP

TAIR|locus:2124014 RD26 "RESPONSIVE TO DESICCATION 26" [Arabidopsis thaliana (taxid:3702)]

 Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 66/226 (29%), Positives = 99/226 (43%)

Query:     8 LPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKR-------- 59
             LP G +F P+DE+L+  YL  K++G    F+   + D+DLY FD PWD+  +        
Sbjct:    14 LPPGFRFYPTDEELLVQYLCRKVAGYH--FSLQVIGDIDLYKFD-PWDLPSKQTCFTFVG 70

Query:    60 -----FGGTNLEDGEDIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPI 114
                  + G  L   ++ YFF+   +K  NGSR +R  GSG W+     K++ +    R +
Sbjct:    71 EYNCNYLGKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITADG--RRV 128

Query:   115 GSKKRFRYEKDNSPHNGC--WIMHEYTMNASLLPQNHHCSSDCVLCRLRKNGGQSVGXXX 172
             G KK   +    +P      WIMHEY +             D VLCR+ K    S     
Sbjct:   129 GIKKALVFYAGKAPKGTKTNWIMHEYRLIEHSRSHGSSKLDDWVLCRIYKKTSGS----- 183

Query:   173 XXXXXXXXXQVEDNDHQPTGKSNSRKRLTPIDDA--TYPHLADDKF 216
                      Q    +H   G S+S    + +DD   ++P + D  F
Sbjct:   184 -QRQAVTPVQACREEHSTNGSSSSSS--SQLDDVLDSFPEIKDQSF 226

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2097720 NAC045 "NAC domain containing protein 45" [Arabidopsis thaliana (taxid:3702)]

 Score = 213 (80.0 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 59/161 (36%), Positives = 85/161 (52%)

Query:     8 LPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNLED 67
             LP G +F P+DE+L+ YYL  KI+G+        + +VDLY   EPWD+     G +L  
Sbjct:     6 LPPGFRFHPTDEELITYYLKRKINGLEIELE--VIAEVDLYKC-EPWDL----PGKSLLP 58

Query:    68 GEDI--YFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKD 125
              +D   YFF+   +K  NGSR +R    G W+  A GK  R    +R IG+KK   Y + 
Sbjct:    59 SKDQEWYFFSPRDRKYPNGSRTNRATKGGYWK--ATGKDRRVSWRDRAIGTKKTLVYYRG 116

Query:   126 NSPHN---GCWIMHEYTMNASLLPQNHHCSSDC-VLCRLRK 162
              +PH    G W+MHEY ++ +    + +   D   LCR+ K
Sbjct:   117 RAPHGIRTG-WVMHEYRLDETECEPSAYGMQDAYALCRVFK 156

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2089764 NAC057 "NAC domain containing protein 57" [Arabidopsis thaliana (taxid:3702)]

 Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 65/219 (29%), Positives = 96/219 (43%)

Query:     8 LPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNLED 67
             LP G +F P+DE+LV+YYL  KI+G         + +VDLY   EPWD+ ++       D
Sbjct:     6 LPPGFRFHPTDEELVNYYLKRKINGQEIELD--IIPEVDLYKC-EPWDLAEK-SFLPSRD 61

Query:    68 GEDIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKDNS 127
              E  YFF    +K  NG R +R    G W+  + GK  R  + +R IG KK   Y K  +
Sbjct:    62 PE-WYFFGPRDRKYPNGFRTNRATRGGYWK--STGKDRRVTSQSRAIGMKKTLVYYKGRA 118

Query:   128 PHN--GCWIMHEYTMNASLLPQNHHCSSDCVLCRLRKNGG-----QSVGXXXXXXXXXXX 180
             P      W+MHEY ++               LCR+ K  G     +S             
Sbjct:   119 PQGIRTDWVMHEYRLDDKDCDDPSSLQDSYALCRVFKKNGICSELESERQLQTGQCSFTT 178

Query:   181 XQVED-NDHQPTGKSNSRKRLTP---IDDATYPHLADDK 215
               +E+ N +     +N  + ++P   +  A    + DDK
Sbjct:   179 ASMEEINSNNNNNYNNDYETMSPEVGVSSACVEEVVDDK 217

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2016049 VND7 "vascular related NAC-domain protein 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 203 (76.5 bits), Expect = 3.3e-16, P = 3.3e-16
 Identities = 56/159 (35%), Positives = 81/159 (50%)

Query:     8 LPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNLED 67
             +P G +F P++E+LV YYL  KI+ + +  A   + ++DLY   EPWDI  R      E+
Sbjct:     9 MPPGFRFHPTEEELVGYYLDRKINSMKS--ALDVIVEIDLYKM-EPWDIQARCK-LGYEE 64

Query:    68 GEDIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKDNS 127
               + YFF+   +K   G+R +R   +G W+     K V S N    IG +K   Y K  +
Sbjct:    65 QNEWYFFSHKDRKYPTGTRTNRATAAGFWKATGRDKAVLSKN--SVIGMRKTLVYYKGRA 122

Query:   128 PHN--GCWIMHEYTM-NASLLPQNHHCSSDCVLCR-LRK 162
             P+     WIMHEY + N+ L P         V+CR  RK
Sbjct:   123 PNGRKSDWIMHEYRLQNSELAPVQEE---GWVVCRAFRK 158

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0009735 "response to cytokinin stimulus" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0009741 "response to brassinosteroid stimulus" evidence=IEP;RCA

GO:0010089 "xylem development" evidence=RCA;IMP;TAS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0007155 "cell adhesion" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010090 "trichome morphogenesis" evidence=RCA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0042546 "cell wall biogenesis" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

GO:0045010 "actin nucleation" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: NAC145 NAC domain protein, IPR003441 (340 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	226
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	5e-30

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  108 bits (271), Expect = 5e-30
 Identities = 51/136 (37%), Positives = 70/136 (51%), Gaps = 10/136 (7%)

Query: 8   LPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNLED 67
           LP G +F P+DE+LV YYL  K+ G P P  +  + +VD+Y F EPWD+           
Sbjct: 1   LPPGFRFHPTDEELVVYYLKRKVLGKPLPLLD-VIPEVDIYKF-EPWDLPDGKAKG---G 55

Query: 68  GEDIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKDNS 127
             + YFF+   +K  NGSR +R  GSG W+     K V S      +G KK   + K  +
Sbjct: 56  DREWYFFSPRDRKYPNGSRTNRATGSGYWKATGKDKPVLSKG-GEVVGMKKTLVFYKGRA 114

Query: 128 PHNGC---WIMHEYTM 140
           P  G    W+MHEY +
Sbjct: 115 P-KGEKTDWVMHEYRL 129

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	226
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=6.1e-45  Score=287.69  Aligned_cols=127  Identities=39%  Similarity=0.733  Sum_probs=92.6

Q ss_pred             CCCCceeCCChHHHHHHHHhhhhcCCCCCCccceEEeccCCCCCCCCchhhhcCCCCCCCCceEEeeeccccccCCCCcc
Q 044940            8 LPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNLEDGEDIYFFTRLKKKSINGSRI   87 (226)
Q Consensus         8 LppGfRF~PTDeELi~~YL~~ki~g~~~p~~~~~I~~~Dvy~~~~Pw~L~~~~~~~~~~~~~~wyFFs~~~~~~~~g~R~   87 (226)
                      |||||||+|||||||.+||++|+.|.+++. ..+|+++|||++ |||+|+..+.    .++++||||+++++++.+|.|.
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~~-~~~i~~~Diy~~-~P~~L~~~~~----~~~~~~yFF~~~~~~~~~~~r~   74 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLPC-EDVIHDVDIYSA-HPWELPAKFK----GGDEEWYFFSPRKKKYPNGGRP   74 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHCS--CHSEE--GGGS--GGGCHHHSS----S-SSEEEEEEE----------S
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCCc-ccceeecccCcc-ChHHhhhhcc----CCCceEEEEEecccccCCcccc
Confidence            899999999999999999999999999887 367999999996 9999995432    2445799999999999999999


Q ss_pred             cccccceeeeccCCCceEEeCCCCeeeeeEEEEeeecCCCC--CCcCeEEEEEEeC
Q 044940           88 DRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKDNSP--HNGCWIMHEYTMN  141 (226)
Q Consensus        88 ~R~~~~G~Wk~~g~~k~I~~~~~g~~vG~kk~l~Fy~g~~~--~kT~WvMhEY~l~  141 (226)
                      +|++++|+||++|+.+.|... +|.+||+|++|+||.++.+  .+|+|+||||+|.
T Consensus        75 ~R~~~~G~Wk~~g~~~~i~~~-~g~~iG~k~~l~f~~~~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   75 NRVTGGGYWKSTGKEKPIKDP-GGKVIGFKKTLVFYSGKSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             -EEETTEEEEEECEEEEEEE--TTCEEEEEEEEEEEESSTTS-EEEEEEEEEEEE-
T ss_pred             cccccceEEeecccccccccc-cceeeeeEEEEEEEeccCCCCCcCCeEEEEEEeC
Confidence            999999999999999999997 7999999999999976544  4899999999984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	226
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		9e-16
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		8e-14
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		9e-14

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score = 80.1 bits (196), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 58/162 (35%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 8   LPVGCKFLPSDEQLVHYYLFNKISG--IPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNL 65
           LP G +F P+D++LV +YL  K +G  +P P     + +VDLY FD PWD+ +R     L
Sbjct: 15  LPPGFRFHPTDDELVEHYLCRKAAGQRLPVPI----IAEVDLYKFD-PWDLPER----AL 65
Query: 66  EDGEDIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKD 125
               + YFFT   +K  NGSR +R  G+G W+   A K V      R +G KK   +   
Sbjct: 66  FGAREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPV--APRGRTLGIKKALVFYAG 123
Query: 126 NSPH--NGCWIMHEYTMNASLLPQNHHCSS-----DCVLCRL 160
            +P      WIMHEY +  +               D VLCRL
Sbjct: 124 KAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRL 165

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score = 73.6 bits (179), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 55/161 (34%), Positives = 81/161 (50%), Gaps = 17/161 (10%)
Query: 8   LPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNLED 67
           LP G +F P+DE+L+  YL  K +G    F+   + ++DLY FD PW +        L  
Sbjct: 20  LPPGFRFYPTDEELMVQYLCRKAAGYD--FSLQLIAEIDLYKFD-PWVL----PNKALFG 72
Query: 68  GEDIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKDNS 127
            ++ YFF+   +K  NGSR +R  GSG W+     K++ S    R +G KK   +    +
Sbjct: 73  EKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKII-STEGQR-VGIKKALVFYIGKA 130
Query: 128 PH--NGCWIMHEYTMNASLLPQNHHCSS---DCVLCRLRKN 163
           P      WIMHEY +   + P   + S+   D VLCR+ K 
Sbjct: 131 PKGTKTNWIMHEYRL---IEPSRRNGSTKLDDWVLCRIYKK 168

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score = 73.6 bits (179), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 81/161 (50%), Gaps = 17/161 (10%)
Query: 8   LPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNLED 67
           LP G +F P+DE+L+  YL  K +G    F+   + ++DLY FD PW +        L  
Sbjct: 17  LPPGFRFYPTDEELMVQYLCRKAAGYD--FSLQLIAEIDLYKFD-PWVL----PNKALFG 69
Query: 68  GEDIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKDNS 127
            ++ YFF+   +K  NGSR +R  GSG W+     K++ +    + +G KK   +    +
Sbjct: 70  EKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTE--GQRVGIKKALVFYIGKA 127
Query: 128 PH--NGCWIMHEYTMNASLLPQNHHCSS---DCVLCRLRKN 163
           P      WIMHEY +   + P   + S+   D VLCR+ K 
Sbjct: 128 PKGTKTNWIMHEYRL---IEPSRRNGSTKLDDWVLCRIYKK 165

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	226
1ut7_A	171	No apical meristem protein; transcription regulati	3e-29
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	4e-28

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  106 bits (267), Expect = 3e-29
 Identities = 51/163 (31%), Positives = 76/163 (46%), Gaps = 14/163 (8%)

Query: 8   LPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNLED 67
           LP G +F P+DE+L+  YL  K +G         + ++DLY FD PW +        L  
Sbjct: 17  LPPGFRFYPTDEELMVQYLCRKAAGYDFSLQ--LIAEIDLYKFD-PWVL----PNKALFG 69

Query: 68  GEDIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKDNS 127
            ++ YFF+   +K  NGSR +R  GSG W+     K++ +    + +G KK   +    +
Sbjct: 70  EKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTE--GQRVGIKKALVFYIGKA 127

Query: 128 PHNGC---WIMHEYTMNASLLPQNHHCSSDCVLCRL-RKNGGQ 166
           P  G    WIMHEY +             D VLCR+ +K    
Sbjct: 128 PK-GTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSSA 169

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  103 bits (260), Expect = 4e-28
 Identities = 58/167 (34%), Positives = 78/167 (46%), Gaps = 19/167 (11%)

Query: 8   LPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNLED 67
           LP G +F P+D++LV +YL  K +G   P     + +VDLY FD PWD+        L  
Sbjct: 15  LPPGFRFHPTDDELVEHYLCRKAAGQRLPVP--IIAEVDLYKFD-PWDL----PERALFG 67

Query: 68  GEDIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKDNS 127
             + YFFT   +K  NGSR +R  G+G W+   A K V      R +G KK   +    +
Sbjct: 68  AREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPR--GRTLGIKKALVFYAGKA 125

Query: 128 PHNGC---WIMHEYTMNASLLP-----QNHHCSSDCVLCRL-RKNGG 165
           P  G    WIMHEY +  +        +      D VLCRL  K   
Sbjct: 126 PR-GVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNE 171

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	226
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=1.6e-57  Score=375.13  Aligned_cols=154  Identities=36%  Similarity=0.631  Sum_probs=128.6

Q ss_pred             cccCCCCCCceeCCChHHHHHHHHhhhhcCCCCCCccceEEeccCCCCCCCCchhhhcCCCCCCCCceEEeeeccccccC
Q 044940            3 ERSRILPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNLEDGEDIYFFTRLKKKSI   82 (226)
Q Consensus         3 ~~~~~LppGfRF~PTDeELi~~YL~~ki~g~~~p~~~~~I~~~Dvy~~~~Pw~L~~~~~~~~~~~~~~wyFFs~~~~~~~   82 (226)
                      +....|||||||+|||||||.|||++|+.|.++|.  .+|.++|||.+ |||+||+.+.    .+..+|||||+++++|+
T Consensus        10 ~~~~~LPpGfRF~PTDeELV~~YL~~K~~g~~~~~--~~I~evDvy~~-~Pw~Lp~~~~----~g~~ewYFFs~r~~ky~   82 (174)
T 3ulx_A           10 EAELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPV--PIIAEVDLYKF-DPWDLPERAL----FGAREWYFFTPRDRKYP   82 (174)
T ss_dssp             CSTTTCCTTCCCCCCHHHHHHHTHHHHHHTCCCSS--SCCEECCGGGS-CGGGSGGGCS----SCSSEEEEEEECCC---
T ss_pred             ccccCCCCcceeCCCHHHHHHHHHHHHhcCCCCCc--CeeeecccccC-Cchhhhhhhc----cCCceEEEEeccccccC
Confidence            45678999999999999999999999999999986  58999999985 9999998742    23456999999999999


Q ss_pred             CCCcccccccceeeeccCCCceEEeCCCCeeeeeEEEEeeecCCCCC--CcCeEEEEEEeCCCCCCC-----CCCCCCCe
Q 044940           83 NGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKDNSPH--NGCWIMHEYTMNASLLPQ-----NHHCSSDC  155 (226)
Q Consensus        83 ~g~R~~R~~~~G~Wk~~g~~k~I~~~~~g~~vG~kk~l~Fy~g~~~~--kT~WvMhEY~l~~~~~~~-----~~~~~~~~  155 (226)
                      +|.|++|+|++||||++|+++.|...  |.+||+||+|+||.|++++  +|+|+||||+|.......     +....++|
T Consensus        83 ~g~R~nR~t~~G~WkatG~dk~I~~~--g~~vG~KktLvFy~g~~p~g~kT~WvMhEY~L~~~~~~~~~~~~~~~~~~~w  160 (174)
T 3ulx_A           83 NGSRPNRAAGNGYWKATGADKPVAPR--GRTLGIKKALVFYAGKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDW  160 (174)
T ss_dssp             --CCSCEEETTEEEEECSCCEEECCS--SSCCEEEEEEEEEESSTTSCEEEEEEEEEEEECSCC-----------CCSSE
T ss_pred             CCCCceeecCCceEccCCCCcEEeeC--CcEEEEEEEEEEecCCCCCCCcCCeEEEEEEeCCCCCcccccccCCCCCCCE
Confidence            99999999999999999999999875  8999999999999998875  899999999999764321     11246899


Q ss_pred             EEEEEEecCC
Q 044940          156 VLCRLRKNGG  165 (226)
Q Consensus       156 VLCrI~~k~~  165 (226)
                      ||||||+|++
T Consensus       161 VlCrvf~K~~  170 (174)
T 3ulx_A          161 VLCRLYNKKN  170 (174)
T ss_dssp             EEEEEEESCC
T ss_pred             EEEEEEEcCC
Confidence            9999999864

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=6.6e-57  Score=370.93  Aligned_cols=152  Identities=32%  Similarity=0.622  Sum_probs=124.1

Q ss_pred             cCCCCCCceeCCChHHHHHHHHhhhhcCCCCCCccceEEeccCCCCCCCCchhhhcCCCCCCCCceEEeeeccccccCCC
Q 044940            5 SRILPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNLEDGEDIYFFTRLKKKSING   84 (226)
Q Consensus         5 ~~~LppGfRF~PTDeELi~~YL~~ki~g~~~p~~~~~I~~~Dvy~~~~Pw~L~~~~~~~~~~~~~~wyFFs~~~~~~~~g   84 (226)
                      ...|||||||+|||||||.|||++|+.|.+++.  .+|.++|||.+ |||+||+.+    ..++.+|||||++++++++|
T Consensus        14 ~~~lPpGfRF~PTDeELv~~YL~~K~~g~~~~~--~~I~e~Diy~~-~Pw~Lp~~~----~~g~~ewyFFs~r~~k~~~g   86 (171)
T 1ut7_A           14 QLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSL--QLIAEIDLYKF-DPWVLPNKA----LFGEKEWYFFSPRDRKYPNG   86 (171)
T ss_dssp             SSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSS--CCSEECCGGGS-CGGGHHHHS----SSCSSEEEEEEECCC-----
T ss_pred             ccCCCCcceeCCChHHHHHHHHHHHhcCCCCCC--CeEeecccccC-ChhHhhchh----hcCCccEEEEeccccccCCC
Confidence            568999999999999999999999999999986  58999999985 999999974    23445699999999999999


Q ss_pred             CcccccccceeeeccCCCceEEeCCCCeeeeeEEEEeeecCCCCC--CcCeEEEEEEeCCCCCCCCCCCCCCeEEEEEEe
Q 044940           85 SRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKDNSPH--NGCWIMHEYTMNASLLPQNHHCSSDCVLCRLRK  162 (226)
Q Consensus        85 ~R~~R~~~~G~Wk~~g~~k~I~~~~~g~~vG~kk~l~Fy~g~~~~--kT~WvMhEY~l~~~~~~~~~~~~~~~VLCrI~~  162 (226)
                      .|++|+|++||||++|+++.|...  +.+||+||+|+||.+++++  +|+|+||||+|.......+....++|||||||+
T Consensus        87 ~R~~R~t~~G~Wk~tG~~k~I~~~--~~~vG~KktLvFy~g~~p~g~kT~WvMhEY~l~~~~~~~~~~~~~~~VlCrv~~  164 (171)
T 1ut7_A           87 SRPNRVAGSGYWKATGTDKIISTE--GQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYK  164 (171)
T ss_dssp             --CCEEETTEEEEEEEEEEEEEET--TEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC--------CCEEEEEEEE
T ss_pred             CcccccCCCCEEeccCCCceEEec--CcEEEEEEEEEEEcCcCCCCCcCCeEEEEEEcCCCccccCcccCCCEEEEEEEE
Confidence            999999999999999999999985  7999999999999998875  899999999999764322224568999999999


Q ss_pred             cCC
Q 044940          163 NGG  165 (226)
Q Consensus       163 k~~  165 (226)
                      |..
T Consensus       165 k~~  167 (171)
T 1ut7_A          165 KQS  167 (171)
T ss_dssp             CC-
T ss_pred             cCC
Confidence            864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	226
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	2e-33

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  115 bits (290), Expect = 2e-33
 Identities = 52/168 (30%), Positives = 78/168 (46%), Gaps = 15/168 (8%)

Query: 1   MQERSRI----LPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDI 56
           +QE   +    LP G +F P+DE+L+  YL  K +G         + ++DLY FD PW +
Sbjct: 6   IQETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQ--LIAEIDLYKFD-PWVL 62

Query: 57  WKRFGGTNLEDGEDIYFFTRLKKKSINGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGS 116
                   L   ++ YFF+   +K  NGSR +R  GSG W+     K++ +    + +G 
Sbjct: 63  P----NKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTE--GQRVGI 116

Query: 117 KKRFRYEKDNSP--HNGCWIMHEYTMNASLLPQNHHCSSDCVLCRLRK 162
           KK   +    +P      WIMHEY +             D VLCR+ K
Sbjct: 117 KKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYK 164

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	226
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.5e-54  Score=352.48  Aligned_cols=153  Identities=31%  Similarity=0.590  Sum_probs=123.9

Q ss_pred             cccCCCCCCceeCCChHHHHHHHHhhhhcCCCCCCccceEEeccCCCCCCCCchhhhcCCCCCCCCceEEeeeccccccC
Q 044940            3 ERSRILPVGCKFLPSDEQLVHYYLFNKISGIPTPFAEYFVKDVDLYDFDEPWDIWKRFGGTNLEDGEDIYFFTRLKKKSI   82 (226)
Q Consensus         3 ~~~~~LppGfRF~PTDeELi~~YL~~ki~g~~~p~~~~~I~~~Dvy~~~~Pw~L~~~~~~~~~~~~~~wyFFs~~~~~~~   82 (226)
                      ..+++|||||||+|||||||.|||++|+.|.+++.  .+|.++|||.+ |||+||+.+.    .++++|||||++.++++
T Consensus        12 ~~~l~LPpG~RF~PTDeELv~~YL~~Ki~g~~l~~--~~I~~~Dvy~~-~Pw~Lp~~~~----~~~~~wyFft~~~~k~~   84 (166)
T d1ut7a_          12 LTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSL--QLIAEIDLYKF-DPWVLPNKAL----FGEKEWYFFSPRDRKYP   84 (166)
T ss_dssp             CCSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSS--CCSEECCGGGS-CGGGHHHHSS----SCSSEEEEEEECCC---
T ss_pred             cccccCCCccccCCCcHHHHHHHHHHHHcCCCCCc--ccceeccCCcC-Chhhccchhc----cCcceEEEEeeeccccC
Confidence            35678999999999999999999999999999987  58999999985 9999998742    34456999999999999


Q ss_pred             CCCcccccccceeeeccCCCceEEeCCCCeeeeeEEEEeeecCCCCC--CcCeEEEEEEeCCCCCCCCCCCCCCeEEEEE
Q 044940           83 NGSRIDRKVGSGAWQGEAAGKLVRSCNFNRPIGSKKRFRYEKDNSPH--NGCWIMHEYTMNASLLPQNHHCSSDCVLCRL  160 (226)
Q Consensus        83 ~g~R~~R~~~~G~Wk~~g~~k~I~~~~~g~~vG~kk~l~Fy~g~~~~--kT~WvMhEY~l~~~~~~~~~~~~~~~VLCrI  160 (226)
                      +|.|.+|++++|+||++|+++.|..  +|.+||+|++|+||.++++.  +|+|+||||+|.+..........++||||||
T Consensus        85 ~g~r~~R~~g~G~Wk~~g~~~~i~~--~g~~vG~kk~l~fy~~~~~~~~~t~W~M~EY~l~~~~~~~~~~~~~~~VLCrI  162 (166)
T d1ut7a_          85 NGSRPNRVAGSGYWKATGTDKIIST--EGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRI  162 (166)
T ss_dssp             ----CCEEETTEEEEEEEEEEEEEE--TTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC--------CCEEEEEE
T ss_pred             CCCccccccCCCEecccCCCceEec--CCcEEEEEEEEEEEecCCCCCCccCeEEEEEecCCcccccCccccCCEEEEEE
Confidence            9999999999999999999998886  48999999999999988765  8999999999997665444456789999999


Q ss_pred             EecC
Q 044940          161 RKNG  164 (226)
Q Consensus       161 ~~k~  164 (226)
                      |+|.
T Consensus       163 ~~Kk  166 (166)
T d1ut7a_         163 YKKQ  166 (166)
T ss_dssp             EECC
T ss_pred             EecC
Confidence            9873