Citrus Sinensis ID: 044976

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840------

MMLAGYDVDFLFREAQTRWLKPAEVLFILQNYDKYELTQEPPQKPNSGSLFLFNKRVLRFFRKDGHNWRKKKDGRAVGEAHERLKVGNAEALNCYYAHGEQNPNFQRRSYWMLDPAYEHIVLVHYREITEGRPSPGSVVVSPGASSTFTLSPASYVTPNPGPTSLKSDFYEPYQSISSPSSIEVTSEMASKDNAVDSKGGSTSSEAEVSQALRKLKEQLSLNDDMFEEIDSLSRQDLDSESKISQQDQNSTNQFQLHNNFYQDHIGVPLEADLRLTVAQKQKFAIREISPDWGYANESTKVIIVGSFLCDPSESAWSCMFGDTEVPLQIIQEGVIRCEAPPRLPGKVTLCITSGNRESCSEVKEFDYRVKPNSYDNWSQKEATKSHDELLLLVRFVQMLLSDSSVNKEEGVELGYHELRGMKADDDLWGQVIDSLLVGSGNSLDTIDWLLQEVLKDKLQQWLSSKSLRESDQPGCSLSKKEQGIIHMVAGLGFEWALNPILSCGVSINFRDINGWTALHWAARFGREKMVAALLASGASAGAVTDPNPLDPTGRTPAFIAASSGHKGLAGYLSEVALTSHLSSLTLEESELSKNSAEVQAEITVNSISNGNISSTEDQLSLKDTLAAVRNAAQAAARIQSAFRAHSFRKRQQRDLAAIGASLDEYGINPDDIPGLSAISKLAFRNARDHNSAALSIQKKYRGWKGRKDYLAIRQKVVKIQAHVRGYQVRKKYKVIWAVGVLDKVILRWRRKGVGLRGFRPETESNDESDDEDILKVFRRQKVDATIDESVSRVLSMVDSPTARNQYRRMLERYRQAKAELGETSEAAALSAGDAVDMDDESTYRFV

cccccccHHHHHHHHHHHcccHHHHHHHHHcccccccccccccccccccEEEEEHHHHHHcccccccEEEccccccHHHHHHHcccccEEEEEEEEcccccccccccHHccccccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccHHcccccccccccccccccccccccccccccccHHHHccccEEEEEEccccccccccEEEEEEcccccccccccEEccccccHHHHHHHHHccccccccccccccEEEEEEEcccEEEEEEEEcccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccccHHHHccccccccHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccHHHHHHHHHccHHHHHHHHHccccccccccccccccccccHHHHHHHcccccHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcEEEEEHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccHHHHHcccccccccccccccccc

ccHccccHHHHHHHHHHHHccHHHHHHHHHHHHHccccccccccccccEEEEEcccEEEEEcccccccEEcccccccHHHHHHcccccEEEEEEEEEccccccccEEEEEEEcccccccEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHcccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccEEEEEEcccccccccccEEEEEcccEccHHEEcccEEEEEccccccccEEEEEEEcccEEEEEEEEEEEccccccccccccccccccHcHHHHHHHHHHHHHHccHHcHHHcccccHHHHHHccccccccHHccHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHcHHHHHHHHHHcccccccccccccHHHHHHHHHcHHHHHHHHHHccccccccccccccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHccHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcEEEEEHHHHHHHEHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccHHHHccccccccccccccccccc

MMLAGYDVDFLFREAqtrwlkpaEVLFILQNydkyeltqeppqkpnsgslflfNKRVLRFFRkdghnwrkkkdgravgeAHERLKVGNAEALNCYyahgeqnpnfqrrsywmldpayEHIVLVHYReitegrpspgsvvvspgasstftlspasyvtpnpgptslksdfyepyqsisspssievtsemaskdnavdskggstssEAEVSQALRKLKEQLSLNDDMFEEIDslsrqdldseskisqqdqnstnqfqLHNNfyqdhigvpleaDLRLTVAQKQKFAIReispdwgyanesTKVIIVGSflcdpsesawscmfgdtevplQIIQEgvirceapprlpgkvtlcitsgnrescsevkefdyrvkpnsydnwsqkeatKSHDELLLLVRFVQMLlsdssvnkeegvELGYHELrgmkadddlwgQVIDSLlvgsgnslDTIDWLLQEVLKDKLQQWLsskslresdqpgcslskkeQGIIHMVAGLGfewalnpilscgvsinfrdinGWTALHWAARFGREKMVAALLASgasagavtdpnpldptgrtpafiaassghkgLAGYLSEVALTShlssltleeselskNSAEVQAEITVNsisngnisstedqLSLKDTLAAVRNAAQAAARIQSAFRAHSFRKRQQRDLAAIGAsldeyginpddipglsAISKLAFRNARDHNSAALSIQKKyrgwkgrkDYLAIRQKVVKIQAHVRGYQVRKKYKVIWAVGVLDKVILRWRrkgvglrgfrpetesndesddeDILKVFRRQKVDATIDESVSRVLSMVDSPTARNQYRRMLERYRQAKAELGETSEAaalsagdavdmddestyrfv

MMLAGYDVDFLFREAQTRWLKPAEVLFILQNYDKYELtqeppqkpnsgslflFNKRVLRffrkdghnwrkkkdgravgeaherLKVGNAEALNCYYAHGEQNPNFQRRSYWMLDPAYEHIVLVHYREITEGRPSPGSVVVSPGASSTFTLSPASYVTPNPGPTSLKSDFYEPYQSISSPSSIEVTSEMASKDnavdskggstsSEAEVSQALRKLKEQLSLNDDMFEEIDSLSRQDLDSESKISQQDQNSTNQFQLHNNFYQDHIGVPLEADLRLTVAQKQKFAIreispdwgyanESTKVIIVGSFLCDPSESAWSCMFGDTEVPLQIIQEGVirceapprlPGKVTLcitsgnrescsevkefdyrvkpnsydnwsqkeaTKSHDELLLLVRFVQMLLsdssvnkeEGVELGYHELRGMKADDDLWGQVIDSLLVGSGNSLDTIDWLLQEVLKDKLQQWLSskslresdqpgcslskkEQGIIHMVAGLGFEWALNPILSCGVSINFRDINGWTALHWAARFGREKMVAALLASGASAGAVTDPNPLDPTGRTPAFIAASSGHKGLAGYLSEVALTSHLSSLTLEESELSKNSAEVQAEITvnsisngnissTEDQLSLKDTLAAVRNAAQAAARIQSAFRAHSFRKRQQRDLAAIGASLDEYGINPDDIPGLSAISKLAFRNardhnsaalsiqkkyrgwkgrKDYLAIRQKVVKiqahvrgyqvrkkykviwavgvldkvilrwrrkgvglrgfrpetesndesddediLKVFRRqkvdatidesvsrvlsmvdsptarnqyRRMLERYRQAKAELGETseaaalsagdavdmddestyrfv

MMLAGYDVDFLFREAQTRWLKPAEVLFILQNYDKYELTQEPPQKPNSGSLFLFNKRVLRFFRKDGHNWRKKKDGRAVGEAHERLKVGNAEALNCYYAHGEQNPNFQRRSYWMLDPAYEHIVLVHYREITEgrpspgsvvvspgassTFTLSPASYVTPNPGPTSLKSDFyepyqsisspssieVTSEMASKDNAVDSKGGSTSSEAEVSQALRKLKEQLSLNDDMFEEIDSLSRQDLDSESKISQQDQNSTNQFQLHNNFYQDHIGVPLEADLRLTVAQKQKFAIREISPDWGYANESTKVIIVGSFLCDPSESAWSCMFGDTEVPLQIIQEGVIRCEAPPRLPGKVTLCITSGNRESCSEVKEFDYRVKPNSYDNWSQKEATKSHDEllllvrfvqmllSDSSVNKEEGVELGYHELRGMKADDDLWGQVIDSLLVGSGNSLDTIDWLLQEVLKDKLQQWLSSKSLRESDQPGCSLSKKEQGIIHMVAGLGFEWALNPILSCGVSINFRDINGWTALHWAARFGREKMvaallasgasagavTDPNPLDPTGRTPAFIAASSGHKGLAGYLSEVAltshlssltleeselsKNSAEVQAEITVNSISNGNISSTEDQLSLKDTLaavrnaaqaaariqsafraHSFRKRQQRDLAAIGASLDEYGINPDDIPGLSAISKLAFRNARDHNSAALSIQKKYRGWKGRKDYLAIRQKVVKIQAHVRGYQVRKKYKVIWAVGVLDKVILRWRRKGVGLRGFRPetesndesddedILKVFRRQKVDATIDESVSRVLSMVDSPTARNQYRRMLERYRQAKAELGETSEAAALSAGDAVDMDDESTYRFV

***AGYDVDFLFREAQTRWLKPAEVLFILQNYDKYEL***********SLFLFNKRVLRFFRKDGHNWRKKKDGRAVGEAHERLKVGNAEALNCYYAHGEQNPNFQRRSYWMLDPAYEHIVLVHYREIT****************************************************************************************************************************FQLHNNFYQDHIGVPLEADLRLTVAQKQKFAIREISPDWGYANESTKVIIVGSFLCDPSESAWSCMFGDTEVPLQIIQEGVIRCEAPPRLPGKVTLCITSGNRESCSEVKEFDYRVKPNSYDNW********HDELLLLVRFVQMLLSDSSVNKEEGVELGYHELRGMKADDDLWGQVIDSLLVGSGNSLDTIDWLLQEVLKDKLQQWL*******************QGIIHMVAGLGFEWALNPILSCGVSINFRDINGWTALHWAARFGREKMVAALLASG********************FIA****HKGLAGYLSEVALT***************************************************************************DLAAIGASLDEYGINPDDIPGLSAISKLAFRNARDHNSAALSIQKKYRGWKGRKDYLAIRQKVVKIQAHVRGYQVRKKYKVIWAVGVLDKVILRWRRKGVGLRGF*****************VF*********************************************************************

******D**FLFREAQTRWLKPAEVLFILQNYDKYELTQEPPQKPNSGSLFLFNKRVLRFFRKDGHNWRKKK***********LKVGNAEALNCYYAHGEQNPNFQRRSYWMLDPAYEHIVLVHYREITEG*********************************************************************************************************************************************************IREISPDWGYANESTKVIIVGSFLCDPSESAWSCMFGDTEVPLQIIQEGVIRCEAPPRLPGKVTLCITSGNRESCSEVKEFDYRVKPNSYDNWSQKEATKSHDELLLLVRFVQML*********************************************TIDWLLQEVLKDKLQQWLSSKS***********SKKEQGIIHMVAGLGFEWALNPILSCGVSINFRDINGWTALHWAARFGREKMVAALLASGASAGAVTDPNPLDPTGRTPAFIAASSGHKGLAGYLSE*************************AEIT*******************DTLAAVRNAAQAAARIQSA******************************************************IQKKYRGWKGRKDYLAIRQKVVKIQAHV********YKVIWAVGVLDKVILRWRRKG*******************************ATIDESVSRVLSMVDS****NQYRRML*************************DMDDESTYRFV

MMLAGYDVDFLFREAQTRWLKPAEVLFILQNYDKYELTQEPPQKPNSGSLFLFNKRVLRFFRKDGHN***********EAHERLKVGNAEALNCYYAHGEQNPNFQRRSYWMLDPAYEHIVLVHYREITEGRPSPGSVVVSPGASSTFTLSPASYVTPNPGPTSLKSDFYEPYQS***********************************ALRKLKEQLSLNDDMFEEIDSL*****************STNQFQLHNNFYQDHIGVPLEADLRLTVAQKQKFAIREISPDWGYANESTKVIIVGSFLCDPSESAWSCMFGDTEVPLQIIQEGVIRCEAPPRLPGKVTLCITSGNRESCSEVKEFDYRVKPNSYDNWSQKEATKSHDELLLLVRFVQMLLSDSSVNKEEGVELGYHELRGMKADDDLWGQVIDSLLVGSGNSLDTIDWLLQEVLKDKLQQWLSS**************KKEQGIIHMVAGLGFEWALNPILSCGVSINFRDINGWTALHWAARFGREKMVAALLASGASAGAVTDPNPLDPTGRTPAFIAASSGHKGLAGYLSEVALTSHLSS*************EVQAEITVNSISNGNISSTEDQLSLKDTLAAVRNAAQAAARIQSAFRAHSFRKRQQRDLAAIGASLDEYGINPDDIPGLSAISKLAFRNARDHNSAALSIQKKYRGWKGRKDYLAIRQKVVKIQAHVRGYQVRKKYKVIWAVGVLDKVILRWRRKGVGLRGFRP**********EDILKVFRRQKVDATIDESVSRVLSMVDSPTARNQYRRMLERYRQAKAELGETSEAAALSAGDAVDMDDESTYRFV

***AGYDVDFLFREAQTRWLKPAEVLFILQNYDKYELTQEPPQKPNSGSLFLFNKRVLRFFRKDGHNWRKKKDGRAVGEAHERLKVGNAEALNCYYAHGEQNPNFQRRSYWMLDPAYEHIVLVHYREITE***************************************************************************************************************************************************AQKQKFAIREISPDWGYANESTKVIIVGSFLCDPSESAWSCMFGDTEVPLQIIQEGVIRCEAPPRLPGKVTLCITSGNRESCSEVKEFDYRVKPNSYDNWSQKEATKSHDELLLLVRFVQMLLSDSSVN***********LR*MKADDDLWGQVIDSLLVGSGNSLDTIDWLLQEVLKDKLQQWLSSKSLRESDQPGCSLSKKEQGIIHMVAGLGFEWALNPILSCGVSINFRDINGWTALHWAARFGREKMVAALLASGASAGAVTDPNPLDPTGRTPAFIAASSGHKGLAGYLSEVALTSHLSSLT*******************************DQLSLKDTLAAVRNAAQAAARIQSAFRAHSFRKRQQRDLAAIGASLDEYGINPDDIPGLSAISKLAFRNARDHNSAALSIQKKYRGWKGRKDYLAIRQKVVKIQAHVRGYQVRKKYKVIWAVGVLDKVILRWRRKGVGLRGFRP*****DESDDEDILKVFRRQKVDATIDESVSRVLSMVDSPTARNQYRRMLERYRQAKAEL*****************DDESTYRFV

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		846	2.2.26 [Sep-21-2011]
Q9FYG2		1016	Calmodulin-binding transc	yes	no	0.658	0.548	0.663	0.0
Q8GSA7		1032	Calmodulin-binding transc	no	no	0.588	0.482	0.422	1e-111
Q6NPP4		1050	Calmodulin-binding transc	no	no	0.622	0.501	0.402	1e-108
Q9LSP8		838	Calmodulin-binding transc	no	no	0.882	0.891	0.336	1e-107
Q9FY74		1007	Calmodulin-binding transc	no	no	0.630	0.529	0.402	1e-105
O23463		923	Calmodulin-binding transc	no	no	0.615	0.564	0.336	1e-70
Q9Y6Y1		1673	Calmodulin-binding transc	yes	no	0.141	0.071	0.376	2e-17
A2A891		1682	Calmodulin-binding transc	yes	no	0.141	0.071	0.376	2e-17
O94983		1202	Calmodulin-binding transc	no	no	0.135	0.095	0.366	1e-15
Q80Y50		1208	Calmodulin-binding transc	no	no	0.135	0.095	0.352	8e-14

>sp\|Q9FYG2\|CMTA4_ARATH Calmodulin-binding transcription activator 4 OS=Arabidopsis thaliana GN=CMTA4 PE=1 SV=1	Back alignment and function desciption

 Score =  714 bits (1844), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/565 (66%), Positives = 458/565 (81%), Gaps = 8/565 (1%)

Query: 265 IGVPLEADLRLTVAQKQKFAIREISPDWGYANESTKVIIVGSFLCDPSESAWSCMFGDTE 324
           IG+P E ++R+T A  QKF I++ISPDWGYANE+TKVII+GSFLCDP+ES WSCMFG+ +
Sbjct: 428 IGLPFEQEMRVTGAHNQKFTIQDISPDWGYANETTKVIIIGSFLCDPTESTWSCMFGNAQ 487

Query: 325 VPLQIIQEGVIRCEAPPRLPGKVTLCITSGNRESCSEVKEFDYRVKPNSY----DNWSQK 380
           VP +II+EGVIRCEAP   PGKV LCITSG+   CSE++EF+YR KP++           
Sbjct: 488 VPFEIIKEGVIRCEAPQCGPGKVNLCITSGDGLLCSEIREFEYREKPDTCCPKCSEPQTS 547

Query: 381 EATKSHDELLLLVRFVQMLLSDSSVNKEEGVELGYHEL-RGMKADDDLWGQVIDSLLVGS 439
           + + S +EL+LLVRFVQ LLSD S  ++  +E G  +L   +KADDD W  VI +++ GS
Sbjct: 548 DMSTSPNELILLVRFVQTLLSDRSSERKSNLESGNDKLLTKLKADDDQWRHVIGTIIDGS 607

Query: 440 GNSLDTIDWLLQEVLKDKLQQWLSSKSLRESDQPGCSLSKKEQGIIHMVAGLGFEWALNP 499
            +S  T+DWLLQE+LKDKL  WLSS+S  E D   CSLSK+EQGIIHMVAGLGFEWA  P
Sbjct: 608 ASSTSTVDWLLQELLKDKLDTWLSSRSCDE-DYITCSLSKQEQGIIHMVAGLGFEWAFYP 666

Query: 500 ILSCGVSINFRDINGWTALHWAARFGREKMVAALLASGASAGAVTDPNPLDPTGRTPAFI 559
           IL+ GV+++FRDI GW+ALHWAA+FG EKMVAAL+ASGASAGAVTDP+  DP G+T A I
Sbjct: 667 ILAHGVNVDFRDIKGWSALHWAAQFGSEKMVAALIASGASAGAVTDPSRQDPNGKTAASI 726

Query: 560 AASSGHKGLAGYLSEVALTSHLSSLTLEESELSKNSAEVQAEITVNSISNGNISSTEDQL 619
           AAS+GHKGLAGYLSEVALT+HLSSLTLEE+E SK++A+VQ E T+NSIS  + S  EDQ+
Sbjct: 727 AASNGHKGLAGYLSEVALTNHLSSLTLEETENSKDTAQVQTEKTLNSISEQSPSGNEDQV 786

Query: 620 SLKDTLAAVRNAAQAAARIQSAFRAHSFRKRQQRDLAAIGASLDEYGINPDDIPGLSAIS 679
           SLKDTLAAVRNAAQAAARIQ+AFRAHSFRKR+QR+ AA+ A L EYG+  +DI G+SA+S
Sbjct: 787 SLKDTLAAVRNAAQAAARIQAAFRAHSFRKRKQRE-AALVACLQEYGMYCEDIEGISAMS 845

Query: 680 KLAFRNARDHNSAALSIQKKYRGWKGRKDYLAIRQKVVKIQAHVRGYQVRKKYKVI-WAV 738
           KL F   R++NSAALSIQK +RG+K RK +L +RQKVVKIQAHVRGYQ+RK YKVI WAV
Sbjct: 846 KLTFGKGRNYNSAALSIQKNFRGYKDRKCFLELRQKVVKIQAHVRGYQIRKNYKVICWAV 905

Query: 739 GVLDKVILRWRRKGVGLRGFRPETESNDESDDEDILKVFRRQKVDATIDESVSRVLSMVD 798
            +LDKV+LRWRRKGVGLRGFR + ES ++S+DEDILKVFR+QKVD  ++E+ SRVLSM +
Sbjct: 906 RILDKVVLRWRRKGVGLRGFRQDVESTEDSEDEDILKVFRKQKVDVAVNEAFSRVLSMSN 965

Query: 799 SPTARNQYRRMLERYRQAKAELGET 823
           SP AR QY R+L+RY Q KAELG+T
Sbjct: 966 SPEARQQYHRVLKRYCQTKAELGKT 990

Regulates transcriptional activity in response to calcium signals. Binds to the consensus sequence 5'-[ACG]CGCG[GTC]-3'.
Arabidopsis thaliana (taxid: 3702)

>sp\|Q8GSA7\|CMTA3_ARATH Calmodulin-binding transcription activator 3 OS=Arabidopsis thaliana GN=CMTA3 PE=1 SV=1	Back alignment and function description

>sp\|Q6NPP4\|CMTA2_ARATH Calmodulin-binding transcription activator 2 OS=Arabidopsis thaliana GN=CMTA2 PE=1 SV=1	Back alignment and function description

>sp\|Q9LSP8\|CMTA6_ARATH Calmodulin-binding transcription activator 6 OS=Arabidopsis thaliana GN=CMTA6 PE=2 SV=1	Back alignment and function description

>sp\|Q9FY74\|CMTA1_ARATH Calmodulin-binding transcription activator 1 OS=Arabidopsis thaliana GN=CMTA1 PE=2 SV=2	Back alignment and function description

>sp\|O23463\|CMTA5_ARATH Calmodulin-binding transcription activator 5 OS=Arabidopsis thaliana GN=CMTA5 PE=2 SV=2	Back alignment and function description

>sp\|Q9Y6Y1\|CMTA1_HUMAN Calmodulin-binding transcription activator 1 OS=Homo sapiens GN=CAMTA1 PE=1 SV=4	Back alignment and function description

>sp\|A2A891\|CMTA1_MOUSE Calmodulin-binding transcription activator 1 OS=Mus musculus GN=Camta1 PE=2 SV=1	Back alignment and function description

>sp\|O94983\|CMTA2_HUMAN Calmodulin-binding transcription activator 2 OS=Homo sapiens GN=CAMTA2 PE=1 SV=3	Back alignment and function description

>sp\|Q80Y50\|CMTA2_MOUSE Calmodulin-binding transcription activator 2 OS=Mus musculus GN=Camta2 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		846
224057768		928	predicted protein [Populus trichocarpa]	0.983	0.896	0.656	0.0
224072570		915	predicted protein [Populus trichocarpa]	0.982	0.908	0.665	0.0
359473618		995	PREDICTED: calmodulin-binding transcript	0.695	0.590	0.684	0.0
297738475		968	unnamed protein product [Vitis vinifera]	0.661	0.578	0.707	0.0
356528264		995	PREDICTED: calmodulin-binding transcript	0.673	0.572	0.703	0.0
255547682		924	calmodulin-binding transcription activat	0.685	0.627	0.751	0.0
365927830		950	calmodulin-binding transcription factor	0.677	0.603	0.719	0.0
356510899		983	PREDICTED: calmodulin-binding transcript	0.674	0.580	0.704	0.0
365927828		906	calmodulin-binding transcription factor	0.663	0.619	0.670	0.0
297841415		1031	calmodulin binding protein [Arabidopsis	0.658	0.540	0.676	0.0

>gi\|224057768\|ref\|XP_002299314.1\| predicted protein [Populus trichocarpa] gi\|222846572\|gb\|EEE84119.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score = 1150 bits (2976), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 600/914 (65%), Positives = 697/914 (76%), Gaps = 82/914 (8%)

Query: 1   MMLAGYDVDFLFREAQTRWLKPAEVLFILQNYDKYELTQEPPQKPNSGSLFLFNKRVLRF 60
           M  +GYD++ LF EAQTRWLKPAEV+FILQN+DKY+ T++PPQKP SGSLFLFNKRVL+F
Sbjct: 1   MQQSGYDINSLFEEAQTRWLKPAEVIFILQNHDKYQFTEKPPQKPTSGSLFLFNKRVLKF 60

Query: 61  FRKDGHNWRKKKDGRAVGEAHERLKVGNAEALNCYYAHGEQNPNFQRRSYWMLDPAYEHI 120
           FR+DGHNWRKKKDGR+VGEAHERLKVGN EALNCYYAHGEQN NFQRRSYWMLD A+EHI
Sbjct: 61  FRRDGHNWRKKKDGRSVGEAHERLKVGNVEALNCYYAHGEQNQNFQRRSYWMLDRAFEHI 120

Query: 121 VLVHYREITEGRPSPGSVV-VSPGASSTFTLSPASYVTPNPGPTSLKSDFYEPYQSISSP 179
           VLVHYR+ITEG+PSPGS   +SP     F+ SP +  +   G TS  S  YEPYQS SSP
Sbjct: 121 VLVHYRDITEGKPSPGSAAQLSP----IFSYSPGTNTSQTQGSTSAISSVYEPYQSFSSP 176

Query: 180 SSIEVTSEMASKDNAVDSKGGSTSS-EAEVSQALRKLKEQLSLNDDMFEEIDSLSRQD-- 236
           +S++V+S +  KDN V      TSS   EV+Q  R+L+EQLSLN+D  EEI     ++  
Sbjct: 177 ASVDVSSGLGIKDNEVGRTAEFTSSANKEVTQFFRRLEEQLSLNEDSAEEIGPFGAEEGA 236

Query: 237 ------LDSESKISQQDQN-------------------STNQFQLHN------------- 258
                 L+  + IS++DQ+                   + NQ + +N             
Sbjct: 237 INDTKILEYVNNISKEDQSKNLLHGSLYIVDYQSYGGLAGNQLERNNLAPLQDAASLLLP 296

Query: 259 ----------------------NFY-----QDHIGVPLEADLRLTVAQKQKFAIREISPD 291
                                 NFY     QDH+G+P EAD  LTVAQ+QKF I EISP+
Sbjct: 297 QEVENFELPAYSSVIETHENNSNFYAMLYDQDHLGIPNEADSNLTVAQQQKFTIHEISPE 356

Query: 292 WGYANESTKVIIVGSFLCDPSESAWSCMFGDTEVPLQIIQEGVIRCEAPPRLPGKVTLCI 351
           WGYA E+TKVIIVGSFLCDPSES+W CMFGD EVPLQIIQEGVIRCE PP  PGKVTLCI
Sbjct: 357 WGYATEATKVIIVGSFLCDPSESSWMCMFGDIEVPLQIIQEGVIRCECPPHHPGKVTLCI 416

Query: 352 TSGNRESCSEVKEFDYRVKPNSYDNW--SQKEATKSHDELLLLVRFVQMLLSDSSVNKEE 409
           TSGNRESCSE++ F+YR K +S  +   SQ EATKS DELLLL RFVQMLLSD S+ + +
Sbjct: 417 TSGNRESCSEIRGFEYRAKDSSCAHCILSQTEATKSPDELLLLFRFVQMLLSDYSLQRGD 476

Query: 410 GVELGYHELRGMKADDDLWGQVIDSLLVGSGNSLDTIDWLLQEVLKDKLQQWLSSKSLRE 469
            VE+G H LR +KADDD WG +I++LLVGSG S  T+DWLLQ++L DKLQQWLSSKS   
Sbjct: 477 SVEMGIHLLRELKADDDTWGDIIEALLVGSGTSSMTVDWLLQQLLNDKLQQWLSSKSQEG 536

Query: 470 SDQPGCSLSKKEQGIIHMVAGLGFEWALNPILSCGVSINFRDINGWTALHWAARFGREKM 529
            DQPGCS SKKEQGIIHMVAGLGFEWAL+PILS GVSINFRDINGWTALHWAA FGREKM
Sbjct: 537 HDQPGCSFSKKEQGIIHMVAGLGFEWALSPILSHGVSINFRDINGWTALHWAAHFGREKM 596

Query: 530 VAALLASGASAGAVTDPNPLDPTGRTPAFIAASSGHKGLAGYLSEVALTSHLSSLTLEES 589
           VA+LLASGASAGAVTDP+P DP G+TPA IAA+SGH GLAGYLSEVALTSHLSSL LEES
Sbjct: 597 VASLLASGASAGAVTDPSPQDPIGKTPASIAATSGHMGLAGYLSEVALTSHLSSLRLEES 656

Query: 590 ELSKNSAEVQAEITVNSISNGNISSTEDQLSLKDTLAAVRNAAQAAARIQSAFRAHSFRK 649
           +LS  SAEVQAE T++SIS  + ++TEDQ+ LKDTLAA RNAA AAARIQSAFRAHSFRK
Sbjct: 657 QLSIGSAEVQAERTLDSISKESFAATEDQILLKDTLAAARNAALAAARIQSAFRAHSFRK 716

Query: 650 RQQRDLAAIGASLDEYGINPDDIPGLSAISKLAFR-NARDHNSAALSIQKKYRGWKGRKD 708
           R QR+      SLDEYGI   +I GLS++SKLAFR N+   NSAALSIQKKYRGWK R+D
Sbjct: 717 RLQRE----ATSLDEYGICAGEIQGLSSMSKLAFRNNSHVINSAALSIQKKYRGWKSRRD 772

Query: 709 YLAIRQKVVKIQAHVRGYQVRKKYKVI-WAVGVLDKVILRWRRKGVGLRGFRPETESNDE 767
           +LA+RQKVVKIQAHVRGYQ+R+ YK+I WAVG+LDK +LRWRRKG+GLRGFR   ES DE
Sbjct: 773 FLALRQKVVKIQAHVRGYQIRRNYKIICWAVGILDKAVLRWRRKGIGLRGFRNVMESIDE 832

Query: 768 SDDEDILKVFRRQKVDATIDESVSRVLSMVDSPTARNQYRRMLERYRQAKAELGETSE-A 826
           S+DEDILK+FR+QKVD  I+E+VSRVLSMV SP AR QY R L++YRQAKAELG TSE A
Sbjct: 833 SEDEDILKIFRKQKVDGAINEAVSRVLSMVKSPDARQQYHRTLKQYRQAKAELGGTSEPA 892

Query: 827 AALSAGDAVDMDDE 840
           A+ S  DA +M+++
Sbjct: 893 ASTSLADATEMEND 906

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|224072570\|ref\|XP_002303787.1\| predicted protein [Populus trichocarpa] gi\|222841219\|gb\|EEE78766.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|359473618\|ref\|XP_002270865.2\| PREDICTED: calmodulin-binding transcription activator 4-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|297738475\|emb\|CBI27676.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356528264\|ref\|XP_003532724.1\| PREDICTED: calmodulin-binding transcription activator 4-like [Glycine max]	Back alignment and taxonomy information

>gi\|255547682\|ref\|XP_002514898.1\| calmodulin-binding transcription activator (camta), plants, putative [Ricinus communis] gi\|223545949\|gb\|EEF47452.1\| calmodulin-binding transcription activator (camta), plants, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|365927830\|gb\|AEX07775.1\| calmodulin-binding transcription factor SR2L [Solanum lycopersicum]	Back alignment and taxonomy information

>gi\|356510899\|ref\|XP_003524171.1\| PREDICTED: calmodulin-binding transcription activator 4-like [Glycine max]	Back alignment and taxonomy information

>gi\|365927828\|gb\|AEX07774.1\| calmodulin-binding transcription factor SR2 [Solanum lycopersicum]	Back alignment and taxonomy information

>gi\|297841415\|ref\|XP_002888589.1\| calmodulin binding protein [Arabidopsis lyrata subsp. lyrata] gi\|297334430\|gb\|EFH64848.1\| calmodulin binding protein [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		846
TAIR\|locus:2019534		1016	AT1G67310 [Arabidopsis thalian	0.658	0.548	0.559	7.1e-220
TAIR\|locus:2173368		1050	AT5G64220 [Arabidopsis thalian	0.456	0.367	0.359	5.8e-127
TAIR\|locus:2060405		1032	SR1 "signal responsive 1" [Ara	0.462	0.378	0.360	4.4e-104
TAIR\|locus:2130125		923	AT4G16150 [Arabidopsis thalian	0.612	0.561	0.294	1.5e-91
UNIPROTKB\|Q9Y6Y1		1673	CAMTA1 "Calmodulin-binding tra	0.127	0.064	0.398	1.6e-25
UNIPROTKB\|F1PDC5		1596	CAMTA1 "Uncharacterized protei	0.120	0.063	0.401	5.2e-25
MGI\|MGI:2140230		1682	Camta1 "calmodulin binding tra	0.127	0.064	0.398	2.8e-24
UNIPROTKB\|F1P8J0		1204	CAMTA2 "Uncharacterized protei	0.127	0.089	0.380	5.8e-24
UNIPROTKB\|F1RFY4		1201	CAMTA2 "Uncharacterized protei	0.127	0.089	0.380	7.3e-24
UNIPROTKB\|O94983		1202	CAMTA2 "Calmodulin-binding tra	0.127	0.089	0.380	7.3e-24

TAIR\|locus:2019534 AT1G67310 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1560 (554.2 bits), Expect = 7.1e-220, Sum P(3) = 7.1e-220
 Identities = 316/565 (55%), Positives = 391/565 (69%)

Query:   265 IGVPLEADLRLTVAQKQKFAIREISPDWGYANESTKVIIVGSFLCDPSESAWSCMFGDTE 324
             IG+P E ++R+T A  QKF I++ISPDWGYANE+TKVII+GSFLCDP+ES WSCMFG+ +
Sbjct:   428 IGLPFEQEMRVTGAHNQKFTIQDISPDWGYANETTKVIIIGSFLCDPTESTWSCMFGNAQ 487

Query:   325 VPLQIIQEGVIRCEAPPRLPGKVTLCITSGNRESCSEVKEFDYRVKPNSY-DNWSQKEAT 383
             VP +II+EGVIRCEAP   PGKV LCITSG+   CSE++EF+YR KP++     S+ + +
Sbjct:   488 VPFEIIKEGVIRCEAPQCGPGKVNLCITSGDGLLCSEIREFEYREKPDTCCPKCSEPQTS 547

Query:   384 K---SHDEXXXXXXXXXXXXSDSSVNKEEGVELGYHEL-RGMKADDDLWGQVIDSLLVGS 439
                 S +E            SD S  ++  +E G  +L   +KADDD W  VI +++ GS
Sbjct:   548 DMSTSPNELILLVRFVQTLLSDRSSERKSNLESGNDKLLTKLKADDDQWRHVIGTIIDGS 607

Query:   440 GNSLDTIDWLLQEVLKDKLQQWLSSKSLRESDQPGCSLSKKEQGIIHMVAGLGFEWALNP 499
              +S  T+DWLLQE+LKDKL  WLSS+S  E D   CSLSK+EQGIIHMVAGLGFEWA  P
Sbjct:   608 ASSTSTVDWLLQELLKDKLDTWLSSRSCDE-DYITCSLSKQEQGIIHMVAGLGFEWAFYP 666

Query:   500 ILSCGVSINFRDINGWTALHWAARFGREKMXXXXXXXXXXXXXXTDPNPLDPTGRTPAFI 559
             IL+ GV+++FRDI GW+ALHWAA+FG EKM              TDP+  DP G+T A I
Sbjct:   667 ILAHGVNVDFRDIKGWSALHWAAQFGSEKMVAALIASGASAGAVTDPSRQDPNGKTAASI 726

Query:   560 AASSGHKGLAGYLSEVAXXXXXXXXXXXXXXXXKNSAEVQAEITVNSISNGNISSTEDQL 619
             AAS+GHKGLAGYLSEVA                K++A+VQ E T+NSIS  + S  EDQ+
Sbjct:   727 AASNGHKGLAGYLSEVALTNHLSSLTLEETENSKDTAQVQTEKTLNSISEQSPSGNEDQV 786

Query:   620 SLKDTLXXXXXXXXXXXXXXXXXXXHSFRKRQQRDLAAIGASLDEYGINPDDIPGLSAIS 679
             SLKDTL                   HSFRKR+QR+ AA+ A L EYG+  +DI G+SA+S
Sbjct:   787 SLKDTLAAVRNAAQAAARIQAAFRAHSFRKRKQRE-AALVACLQEYGMYCEDIEGISAMS 845

Query:   680 KLAFRNARDHNSAALSIQKKYRGWKGRKDYLAIRQKVVKIQAHVRGYQVRKKYKVI-WAV 738
             KL F   R++NSAALSIQK +RG+K RK +L +RQKVVKIQAHVRGYQ+RK YKVI WAV
Sbjct:   846 KLTFGKGRNYNSAALSIQKNFRGYKDRKCFLELRQKVVKIQAHVRGYQIRKNYKVICWAV 905

Query:   739 GVLDKVILRWRRKGVGLRGFRPXXXXXXXXXXXXILKVFRRQKVDATIDESVSRVLSMVD 798
              +LDKV+LRWRRKGVGLRGFR             ILKVFR+QKVD  ++E+ SRVLSM +
Sbjct:   906 RILDKVVLRWRRKGVGLRGFRQDVESTEDSEDEDILKVFRKQKVDVAVNEAFSRVLSMSN 965

Query:   799 SPTARNQYRRMLERYRQAKAELGET 823
             SP AR QY R+L+RY Q KAELG+T
Sbjct:   966 SPEARQQYHRVLKRYCQTKAELGKT 990

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0005829 "cytosol" evidence=IDA

TAIR\|locus:2173368 AT5G64220 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2060405 SR1 "signal responsive 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2130125 AT4G16150 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|Q9Y6Y1 CAMTA1 "Calmodulin-binding transcription activator 1" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|F1PDC5 CAMTA1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

MGI\|MGI:2140230 Camta1 "calmodulin binding transcription activator 1" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

UNIPROTKB\|F1P8J0 CAMTA2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|F1RFY4 CAMTA2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

UNIPROTKB\|O94983 CAMTA2 "Calmodulin-binding transcription activator 2" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	eugene3.00031402	hypothetical protein (915 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		846
pfam03859		119	pfam03859, CG-1, CG-1 domain	2e-69
smart01076		118	smart01076, CG-1, CG-1 domains are highly conserve	2e-59
cd00204		126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-14
cd00204		126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	1e-13
pfam12796		91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	3e-11
cd00204		126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	4e-10
pfam12796		91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	5e-09
pfam13637		54	pfam13637, Ank_4, Ankyrin repeats (many copies)	8e-09
pfam01833		84	pfam01833, TIG, IPT/TIG domain	3e-07
COG0666		235	COG0666, Arp, FOG: Ankyrin repeat [General functio	8e-07
COG0666		235	COG0666, Arp, FOG: Ankyrin repeat [General functio	1e-06
pfam00023		33	pfam00023, Ank, Ankyrin repeat	1e-06
PHA03095		471	PHA03095, PHA03095, ankyrin-like protein; Provisio	3e-06
cd00204		126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-05
pfam13637		54	pfam13637, Ank_4, Ankyrin repeats (many copies)	2e-05
smart00429		90	smart00429, IPT, ig-like, plexins, transcription f	2e-05
PHA03100		422	PHA03100, PHA03100, ankyrin repeat protein; Provis	3e-05
cd00102		89	cd00102, IPT, Immunoglobulin-like fold, Plexins, T	1e-04
smart00248		30	smart00248, ANK, ankyrin repeats	2e-04
smart00015		23	smart00015, IQ, Calmodulin-binding motif	3e-04
pfam00612		21	pfam00612, IQ, IQ calmodulin-binding motif	4e-04
pfam13606		30	pfam13606, Ank_3, Ankyrin repeat	5e-04
cd01179		85	cd01179, IPT_plexin_repeat2, Second repeat of the	0.002
PTZ00322		664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	0.002
pfam13857		56	pfam13857, Ank_5, Ankyrin repeats (many copies)	0.004

>gnl\|CDD\|217766 pfam03859, CG-1, CG-1 domain	Back alignment and domain information

 Score =  224 bits (573), Expect = 2e-69
 Identities = 75/117 (64%), Positives = 94/117 (80%)

Query: 11  LFREAQTRWLKPAEVLFILQNYDKYELTQEPPQKPNSGSLFLFNKRVLRFFRKDGHNWRK 70
           L  EA++RWL+P E+  ILQN++K+ +T EPP +P SGSLFL+N++V+R+FRKDG+NW+K
Sbjct: 1   LLPEAKSRWLRPEEIYAILQNFEKHFITLEPPTRPPSGSLFLYNRKVVRYFRKDGYNWKK 60

Query: 71  KKDGRAVGEAHERLKVGNAEALNCYYAHGEQNPNFQRRSYWMLDPAYEHIVLVHYRE 127
           KKDG+   EAHE+LKVG  E LNCYYAHGE NP FQRR YW+LD   EHIVLVHY  
Sbjct: 61  KKDGKTTREAHEKLKVGGVEVLNCYYAHGEDNPTFQRRCYWLLDEDLEHIVLVHYLN 117

CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs. Length = 119

>gnl\|CDD\|198144 smart01076, CG-1, CG-1 domains are highly conserved domains of about 130 amino-acid residues	Back alignment and domain information

>gnl\|CDD\|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins	Back alignment and domain information

>gnl\|CDD\|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins	Back alignment and domain information

>gnl\|CDD\|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)	Back alignment and domain information

>gnl\|CDD\|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins	Back alignment and domain information

>gnl\|CDD\|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)	Back alignment and domain information

>gnl\|CDD\|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)	Back alignment and domain information

>gnl\|CDD\|216730 pfam01833, TIG, IPT/TIG domain	Back alignment and domain information

>gnl\|CDD\|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]	Back alignment and domain information

>gnl\|CDD\|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]	Back alignment and domain information

>gnl\|CDD\|200936 pfam00023, Ank, Ankyrin repeat	Back alignment and domain information

>gnl\|CDD\|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional	Back alignment and domain information

>gnl\|CDD\|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins	Back alignment and domain information

>gnl\|CDD\|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)	Back alignment and domain information

>gnl\|CDD\|214657 smart00429, IPT, ig-like, plexins, transcription factors	Back alignment and domain information

>gnl\|CDD\|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional	Back alignment and domain information

>gnl\|CDD\|238050 cd00102, IPT, Immunoglobulin-like fold, Plexins, Transcription factors (IPT)	Back alignment and domain information

>gnl\|CDD\|197603 smart00248, ANK, ankyrin repeats	Back alignment and domain information

>gnl\|CDD\|197470 smart00015, IQ, Calmodulin-binding motif	Back alignment and domain information

>gnl\|CDD\|201341 pfam00612, IQ, IQ calmodulin-binding motif	Back alignment and domain information

>gnl\|CDD\|205784 pfam13606, Ank_3, Ankyrin repeat	Back alignment and domain information

>gnl\|CDD\|238584 cd01179, IPT_plexin_repeat2, Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR)	Back alignment and domain information

>gnl\|CDD\|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional	Back alignment and domain information

>gnl\|CDD\|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		846
KOG0520		975	consensus Uncharacterized conserved protein, conta	100.0
PF03859		118	CG-1: CG-1 domain; InterPro: IPR005559 CG-1 domain	100.0
KOG4412		226	consensus 26S proteasome regulatory complex, subun	99.93
KOG4412		226	consensus 26S proteasome regulatory complex, subun	99.93
PHA02875		413	ankyrin repeat protein; Provisional	99.92
PHA02791		284	ankyrin-like protein; Provisional	99.92
PHA03095		471	ankyrin-like protein; Provisional	99.92
PHA03100		480	ankyrin repeat protein; Provisional	99.92
PHA03095		471	ankyrin-like protein; Provisional	99.91
PHA02878		477	ankyrin repeat protein; Provisional	99.9
PHA02876		682	ankyrin repeat protein; Provisional	99.9
PHA02716		764	CPXV016; CPX019; EVM010; Provisional	99.9
PHA03100		480	ankyrin repeat protein; Provisional	99.9
PHA02946		446	ankyin-like protein; Provisional	99.9
PHA02874		434	ankyrin repeat protein; Provisional	99.9
PHA02791		284	ankyrin-like protein; Provisional	99.89
PHA02946		446	ankyin-like protein; Provisional	99.89
PHA02876		682	ankyrin repeat protein; Provisional	99.89
KOG4177		1143	consensus Ankyrin [Cell wall/membrane/envelope bio	99.89
KOG0510		929	consensus Ankyrin repeat protein [General function	99.88
PHA02989		494	ankyrin repeat protein; Provisional	99.88
PHA02874		434	ankyrin repeat protein; Provisional	99.88
KOG0510		929	consensus Ankyrin repeat protein [General function	99.88
PHA02875		413	ankyrin repeat protein; Provisional	99.87
PHA02989		494	ankyrin repeat protein; Provisional	99.87
KOG0509		600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.87
KOG0508		615	consensus Ankyrin repeat protein [General function	99.87
PHA02798		489	ankyrin-like protein; Provisional	99.87
PHA02716		764	CPXV016; CPX019; EVM010; Provisional	99.87
PHA02917		661	ankyrin-like protein; Provisional	99.86
PHA02878		477	ankyrin repeat protein; Provisional	99.86
PHA02798		489	ankyrin-like protein; Provisional	99.83
KOG4177		1143	consensus Ankyrin [Cell wall/membrane/envelope bio	99.83
PHA02917		661	ankyrin-like protein; Provisional	99.83
PHA02795		437	ankyrin-like protein; Provisional	99.83
PHA02730		672	ankyrin-like protein; Provisional	99.82
PHA02859		209	ankyrin repeat protein; Provisional	99.81
KOG0509		600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.81
KOG0508		615	consensus Ankyrin repeat protein [General function	99.81
PHA02730		672	ankyrin-like protein; Provisional	99.8
PHA02743		166	Viral ankyrin protein; Provisional	99.77
PHA02795		437	ankyrin-like protein; Provisional	99.76
PHA02859		209	ankyrin repeat protein; Provisional	99.75
KOG4369		2131	consensus RTK signaling protein MASK/UNC-44 [Signa	99.74
PHA02792		631	ankyrin-like protein; Provisional	99.74
PLN03192		823	Voltage-dependent potassium channel; Provisional	99.73
TIGR00870		743	trp transient-receptor-potential calcium channel p	99.72
PHA02741		169	hypothetical protein; Provisional	99.71
KOG0502		296	consensus Integral membrane ankyrin-repeat protein	99.7
PHA02884		300	ankyrin repeat protein; Provisional	99.7
KOG0514		452	consensus Ankyrin repeat protein [General function	99.68
KOG0505		527	consensus Myosin phosphatase, regulatory subunit [	99.67
PHA02736		154	Viral ankyrin protein; Provisional	99.66
KOG0502		296	consensus Integral membrane ankyrin-repeat protein	99.66
PLN03192		823	Voltage-dependent potassium channel; Provisional	99.66
PF12796		89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.63
KOG0512		228	consensus Fetal globin-inducing factor (contains a	99.62
PHA02741		169	hypothetical protein; Provisional	99.6
KOG0507		854	consensus CASK-interacting adaptor protein (caskin	99.59
TIGR00870		743	trp transient-receptor-potential calcium channel p	99.58
PHA02743		166	Viral ankyrin protein; Provisional	99.57
KOG0195		448	consensus Integrin-linked kinase [Signal transduct	99.55
KOG0514		452	consensus Ankyrin repeat protein [General function	99.55
PF12796		89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.53
KOG0195		448	consensus Integrin-linked kinase [Signal transduct	99.52
PHA02884		300	ankyrin repeat protein; Provisional	99.52
KOG0505		527	consensus Myosin phosphatase, regulatory subunit [	99.51
KOG4369		2131	consensus RTK signaling protein MASK/UNC-44 [Signa	99.51
KOG0507		854	consensus CASK-interacting adaptor protein (caskin	99.5
PHA02792		631	ankyrin-like protein; Provisional	99.5
KOG0512		228	consensus Fetal globin-inducing factor (contains a	99.49
cd00204		126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.42
PHA02736		154	Viral ankyrin protein; Provisional	99.42
COG0666		235	Arp FOG: Ankyrin repeat [General function predicti	99.41
KOG4214		117	consensus Myotrophin and similar proteins [Transcr	99.38
KOG4214		117	consensus Myotrophin and similar proteins [Transcr	99.36
PF13857		56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.32
KOG0515		752	consensus p53-interacting protein 53BP/ASPP, conta	99.32
cd00204		126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.31
KOG0520		975	consensus Uncharacterized conserved protein, conta	99.29
PF13637		54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.28
PTZ00322		664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.27
PF13857		56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.25
KOG1710		396	consensus MYND Zn-finger and ankyrin repeat protei	99.23
PTZ00322		664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.23
PF13637		54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.21
KOG3676		782	consensus Ca2+-permeable cation channel OSM-9 and	99.21
COG0666		235	Arp FOG: Ankyrin repeat [General function predicti	99.16
KOG0515		752	consensus p53-interacting protein 53BP/ASPP, conta	99.09
KOG3676		782	consensus Ca2+-permeable cation channel OSM-9 and	99.08
KOG1710		396	consensus MYND Zn-finger and ankyrin repeat protei	98.9
cd01175		85	IPT_COE IPT domain of the COE family (Col/Olf-1/EB	98.83
KOG0818		669	consensus GTPase-activating proteins of the GIT fa	98.76
KOG0506		622	consensus Glutaminase (contains ankyrin repeat) [A	98.61
KOG0783		1267	consensus Uncharacterized conserved protein, conta	98.6
KOG0782		1004	consensus Predicted diacylglycerol kinase [Signal	98.55
KOG0705		749	consensus GTPase-activating protein Centaurin gamm	98.52
PF13606		30	Ank_3: Ankyrin repeat	98.5
KOG0818		669	consensus GTPase-activating proteins of the GIT fa	98.48
KOG0705		749	consensus GTPase-activating protein Centaurin gamm	98.37
PF00023		33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.32
KOG0522		560	consensus Ankyrin repeat protein [General function	98.27
PF13606		30	Ank_3: Ankyrin repeat	98.27
PF00023		33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.25
KOG0160		862	consensus Myosin class V heavy chain [Cytoskeleton	98.22
PF01833		85	TIG: IPT/TIG domain; InterPro: IPR002909 This fami	98.19
KOG0522		560	consensus Ankyrin repeat protein [General function	98.13
KOG0506		622	consensus Glutaminase (contains ankyrin repeat) [A	98.13
cd01179		85	IPT_plexin_repeat2 Second repeat of the IPT domain	98.05
KOG0521		785	consensus Putative GTPase activating proteins (GAP	98.03
KOG2384		223	consensus Major histocompatibility complex protein	97.99
KOG0783		1267	consensus Uncharacterized conserved protein, conta	97.95
cd00102		89	IPT Immunoglobulin-like fold, Plexins, Transcripti	97.87
KOG0164		1001	consensus Myosin class I heavy chain [Cytoskeleton	97.84
KOG0511		516	consensus Ankyrin repeat protein [General function	97.82
KOG0160		862	consensus Myosin class V heavy chain [Cytoskeleton	97.78
KOG3609		822	consensus Receptor-activated Ca2+-permeable cation	97.74
KOG2384		223	consensus Major histocompatibility complex protein	97.6
cd00603		90	IPT_PCSR IPT domain of Plexins and Cell Surface Re	97.52
cd01180		94	IPT_plexin_repeat1 First repeat of the IPT domain	97.52
KOG0511		516	consensus Ankyrin repeat protein [General function	97.38
COG5022		1463	Myosin heavy chain [Cytoskeleton]	97.33
COG5022		1463	Myosin heavy chain [Cytoskeleton]	97.3
KOG0782		1004	consensus Predicted diacylglycerol kinase [Signal	97.24
PF00612		21	IQ: IQ calmodulin-binding motif; InterPro: IPR0000	97.2
smart00429		90	IPT ig-like, plexins, transcription factors.	97.17
cd01181		99	IPT_plexin_repeat3 Third repeat of the IPT domain	97.01
KOG0521		785	consensus Putative GTPase activating proteins (GAP	96.92
PF00612		21	IQ: IQ calmodulin-binding motif; InterPro: IPR0000	96.89
KOG3609		822	consensus Receptor-activated Ca2+-permeable cation	96.49
KOG2505		591	consensus Ankyrin repeat protein [General function	96.28
smart00248		30	ANK ankyrin repeats. Ankyrin repeats are about 33	96.24
PTZ00014		821	myosin-A; Provisional	96.12
KOG0164		1001	consensus Myosin class I heavy chain [Cytoskeleton	95.77
smart00015		26	IQ Short calmodulin-binding motif containing conse	95.75
smart00015		26	IQ Short calmodulin-binding motif containing conse	95.65
smart00248		30	ANK ankyrin repeats. Ankyrin repeats are about 33	95.29
cd02849		81	CGTase_C_term Cgtase (cyclodextrin glycosyltransfe	95.22
PTZ00014		821	myosin-A; Provisional	94.91
KOG2505		591	consensus Ankyrin repeat protein [General function	93.83
cd00604		81	IPT_CGTD IPT domain (domain D) of cyclodextrin gly	93.52
KOG2128		1401	consensus Ras GTPase-activating protein family - I	92.81
PF08549		669	SWI-SNF_Ssr4: Fungal domain of unknown function (D	92.76
KOG2128		1401	consensus Ras GTPase-activating protein family - I	90.43
PF06128		284	Shigella_OspC: Shigella flexneri OspC protein; Int	88.1
KOG3610		1025	consensus Plexins (functional semaphorin receptors	82.63

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]	Back alignment and domain information

Probab=100.00  E-value=3e-120  Score=1055.76  Aligned_cols=796  Identities=42%  Similarity=0.641  Sum_probs=574.7

Q ss_pred             ccCCHHHHHHHHHHhcCChHHHHHHHhccccceecccCCCCCCCCceEeeehhhhhhhcccCccceecCCCcchhhhhhh
Q 044976            4 AGYDVDFLFREAQTRWLKPAEVLFILQNYDKYELTQEPPQKPNSGSLFLFNKRVLRFFRKDGHNWRKKKDGRAVGEAHER   83 (846)
Q Consensus         4 ~~~~~~~~~~~~~~~w~~~~e~~~~l~~~~~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~dg~~w~~~~~~~~~~e~~~~   83 (846)
                      +.||+..+++|+++|||+|+||++||+||++|.++++||+||.|||+||||||+|||||||||+||||||||||||||||
T Consensus        21 ~~l~~~~ll~~~~~rWl~~~EI~~il~n~~~~~lt~~s~trp~sGS~flfnRk~lr~fRKDGh~WkKkkDGKtirEaHe~  100 (975)
T KOG0520|consen   21 QDLDIQTLLPEAKSRWLTPEEILAILINHEKFTLTVSSPTRPQSGSIFLFNRKVLRYFRKDGHNWKKKKDGKTIREAHEK  100 (975)
T ss_pred             hhhhhhhhhHHHHhccCChHHHHHHHhcccccccccCCCCCCCCCceeeeccHHHHHHhhcchhhhhcCCCCcChHHHHh
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccCCEeeeEeeecccCCCCccceeeeeccCCCCCceEEEeecccCCCCCCCCCccc--CCCCCCC-Ccc------CCCC
Q 044976           84 LKVGNAEALNCYYAHGEQNPNFQRRSYWMLDPAYEHIVLVHYREITEGRPSPGSVVV--SPGASST-FTL------SPAS  154 (846)
Q Consensus        84 lk~~~~~~~~~~y~~~~~~~~f~rr~y~~~~~~~~~~vlvhy~~~~~~~~~~~~~~~--~~~~~~~-~~~------~~~~  154 (846)
                      |||||+|+||||||||++||||||||||||++.++||||||||||++.+.......+  .+..++. ++.      +.+.
T Consensus       101 LKvg~~~~l~~~Y~Hg~~~ptF~RRcYwllq~~~~hIVLVHYl~v~~~~~~~~~~~~~~~s~~sd~~~S~~~~~~q~~~~  180 (975)
T KOG0520|consen  101 LKVGGVEVLHCYYAHGEINPTFQRRCYWLLQQELEHIVLVHYLNVKGNEDAAKGAGEIFSSIISDKAWSLNQLAGQLSPI  180 (975)
T ss_pred             hccCCccceeeeeecccccchHHHHHHHhhccccCceEEEEEeecccccccccCcccccccccccccccHHHhhcccCcc
Confidence            999999999999999999999999999999999999999999999984432111111  1112211 011      0000


Q ss_pred             CC---------CCCC-----CCCC---CCCCCCCC-----C--------CCcCC-CCcccc--------c------cccc
Q 044976          155 YV---------TPNP-----GPTS---LKSDFYEP-----Y--------QSISS-PSSIEV--------T------SEMA  189 (846)
Q Consensus       155 ~~---------~~~~-----~~~~---~~~~~~~~-----~--------~~~~~-~~~~~~--------~------~~~~  189 (846)
                      +.         .++.     ....   +.+..|..     +        ..+.+ ++....        +      +.++
T Consensus       181 ~~~~~s~~~~v~~i~s~~~~~~~g~~~~~s~~h~i~~~~~~s~~~~~~~p~s~~s~~~~~~~~~~~~~~~~~~~~rs~~~  260 (975)
T KOG0520|consen  181 FHNHSSVNEDVAEINSNQTGNALGSVFGNSRNHRIRLHEVNSLDPLYKLPVSDDSLNLSAPKPIDLPKGPTSVKQRSSSP  260 (975)
T ss_pred             hhcccchHHHHHHHhhhccccccccccCcchhhhhcccccCCccccccccccCCccccccCCCcccccCCcchhhcCCCC
Confidence            00         0000     0000   00011111     0        00000 000000        0      0000


Q ss_pred             ccCC---------CCCCCCCCCCchHHHHHHHHhhhhcccCCcch--hhhhhhccccccccc---chhccccCCccc--c
Q 044976          190 SKDN---------AVDSKGGSTSSEAEVSQALRKLKEQLSLNDDM--FEEIDSLSRQDLDSE---SKISQQDQNSTN--Q  253 (846)
Q Consensus       190 ~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~--~  253 (846)
                      ..+.         ....++..++....+. ++..+.++.+.+...  |....+. ..+...+   ..++....+.+.  .
T Consensus       261 s~~te~l~n~~~~~~~~g~s~s~~l~~i~-~~~~~~~~~~~~p~~~nf~~~ss~-~s~~~~~~~g~g~~~~~~sa~~~~~  338 (975)
T KOG0520|consen  261 SYFTEILGNAPSGLVSQGNSLSSSLQRIS-SFTGLDNAAYEQPNSQNFEPNSSL-NSHVTGQSYGQGLQARSPSATSESR  338 (975)
T ss_pred             cchhhhcccCCCcccccccccccchhhcc-cccccccccccCCccccccccccC-CCCccccccCccccCCCcccccccC
Confidence            0000         0000011011111110 000011111111110  0000000 0000001   001111111100  0


Q ss_pred             c--------cc-cCCCcCCCCCCC--------------------------C---ccccccccccCCceEEEEecCCCCCC
Q 044976          254 F--------QL-HNNFYQDHIGVP--------------------------L---EADLRLTVAQKQKFAIREISPDWGYA  295 (846)
Q Consensus       254 ~--------~~-~~~~~~~s~~~~--------------------------~---~~~~~~~~~~~~~f~I~d~sP~w~~~  295 (846)
                      |        .. ..+...|||+++                          +   +...++| +++|+|+|+||||+|+|+
T Consensus       339 P~~~~~~~~~~~~~l~sgdsf~~~~~t~~e~~d~~q~~s~~~~~~p~~~~~~~~~s~~~~S-~p~qlf~I~DfSP~Wsy~  417 (975)
T KOG0520|consen  339 PITSAADAALSELGLKSGDSFSRWASTFGEISDLGQDPSGEAVWTPENDPMGPPGSFLSPS-SPEQLFTITDFSPEWSYL  417 (975)
T ss_pred             CcchhhccccccccccccccccchhhhhcccccCCCCCccccccccCCCcCCCcccccCCC-CCcceeeeeccCcccccC
Confidence            1        00 013333444430                          0   0123455 359999999999999999


Q ss_pred             CCCeEEEEecc-cCCCCCcccEEEecCCchHHHHHhHhCccccccCCCCCCcceeEEeec-CCcccceeeeeeeccCCCC
Q 044976          296 NESTKVIIVGS-FLCDPSESAWSCMFGDTEVPLQIIQEGVIRCEAPPRLPGKVTLCITSG-NRESCSEVKEFDYRVKPNS  373 (846)
Q Consensus       296 ~ggtkVlI~G~-f~~~~~~~~~ac~fG~~eV~~~Ll~~Ga~~c~~P~h~~G~vpL~vA~~-~~~~~sev~~Fey~~~~~~  373 (846)
                      +||+||+|+|. +....  ..|.||||+.+||++||++||++|+||||.+|.|+|+|+|+ ++..|+|+++|+|...+.+
T Consensus       418 ~ggvKVlV~G~~~~~~~--~~ysc~Fg~~~VPAeliq~GVLrC~~P~h~~G~V~l~V~c~~~~~~~se~ref~~~~~~~~  495 (975)
T KOG0520|consen  418 DGGVKVLVTGFPQDETR--SNYSCMFGEQRVPAELIQEGVLRCYAPPHEPGVVNLQVTCRISGLACSEVREFAYLVQPSQ  495 (975)
T ss_pred             CCCcEEEEecCccccCC--CceEEEeCCccccHHHhhcceeeeecCccCCCeEEEEEEecccceeeeeehheeecccCcc
Confidence            99999999995 33333  34999999999999999999999999999999999999998 8899999999999998887


Q ss_pred             CCCccccccCCCHHHHHHHHHHHHHHhcCCCC----CCCCCcccccC--cchhchhhhcCcHH-HHHHHHccCCCChhhh
Q 044976          374 YDNWSQKEATKSHDELLLLVRFVQMLLSDSSV----NKEEGVELGYH--ELRGMKADDDLWGQ-VIDSLLVGSGNSLDTI  446 (846)
Q Consensus       374 ~~~~~~~~~~~~~~~~~l~~rlv~lLl~~~~~----~~~~~~~~~~~--~~~l~~aa~~g~~~-~i~~ll~~~~~~~~~~  446 (846)
                      .++..+.+  ...-.+.+..|+..++......    ....+..+...  +..+.....+.|.+ .+...........+.+
T Consensus       496 ~~d~~s~~--d~~~~~sl~~rl~~~~~r~~~~~~s~~~~~n~~~~~~~~l~skv~~l~~~~~~r~~~~~~~~~~~~~~~r  573 (975)
T KOG0520|consen  496 QIDKLSWE--DFLFQMSLLHRLETMLNRKQSILSSKPSTENTSDAESGNLASKVVHLLNEWAYRLLKSISENLSSSVNFR  573 (975)
T ss_pred             cccccccc--cchhhhHHHHHHHHHHHHhHhHhhccCCccccccccchhHHHHHHHHHHHHHHHHHhhHhhhccccCCCc
Confidence            66622211  2233455666777666622110    02223333333  56667777788888 7777777777778888


Q ss_pred             hHHHHHHHHhcHHHHHHHHhhCC--CCCCCCCCCCCCCcHHHHHHHcCChhhHHHHHhCCCCCcccCCCCCcHHHHHHHc
Q 044976          447 DWLLQEVLKDKLQQWLSSKSLRE--SDQPGCSLSKKEQGIIHMVAGLGFEWALNPILSCGVSINFRDINGWTALHWAARF  524 (846)
Q Consensus       447 d~~L~~Al~~~~~~~l~~ll~~G--ad~n~~~~d~~G~T~LH~Aa~~G~~~iv~~LL~~Gadin~~D~~G~TpLh~Aa~~  524 (846)
                      +..|...+......||...+...  .....  .|.+|+..+|++|..|+.+.+.+.+..|..++++|..||||||||+.+
T Consensus       574 ~~lllhL~a~~lyawLie~~~e~~~~~~~e--ld~d~qgV~hfca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~~  651 (975)
T KOG0520|consen  574 DMLLLHLLAELLYAWLIEKVIEWAGSGDLE--LDRDGQGVIHFCAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAAFR  651 (975)
T ss_pred             chHHHHHHHHHhHHHHHHHHhcccccCchh--hcccCCChhhHhhhcCCceeEEEEeecccccccccCCCCcccchHhhc
Confidence            88877777777788887777664  33444  899999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCCCCCccccccccCCchhHHHhhhh
Q 044976          525 GREKMVAALLASGASAGAVTDPNPLDPTGRTPAFIAASSGHKGLAGYLSEVALTSHLSSLTLEESELSKNSAEVQAEITV  604 (846)
Q Consensus       525 G~~eiV~~LL~~GA~v~~~~D~~~~d~~G~TPL~lA~~~G~~~iv~~Ll~~Ga~~~~~d~~l~~~~~~~~~~~~~~~~~~  604 (846)
                      ||..++..|++.|++.++++||+..++.|.|+..+|..+||.++..+|.+..+..++.++.+.+...+.+.....+....
T Consensus       652 G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~~L~~~~~~~~~~~~~~s~~~~~~~~~~t~  731 (975)
T KOG0520|consen  652 GREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEKALSAHLSNLELADPNLSADSEEDKAEKTS  731 (975)
T ss_pred             CHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhhHHHHHHhhccccccccCCCchhhhhhhcc
Confidence            99999999999999999999999999999999999999999999999999998888899988884433444444444442


Q ss_pred             cccccccCCCCccccchhhhhhhHhhhHHHHHhhHHHHhHHHHHHHHHHHHHHhhhhhcccCCCCCccccHHHHHH--HH
Q 044976          605 NSISNGNISSTEDQLSLKDTLAAVRNAAQAAARIQSAFRAHSFRKRQQRDLAAIGASLDEYGINPDDIPGLSAISK--LA  682 (846)
Q Consensus       605 ~~~~~~~~~~~~d~~~l~~sl~A~rna~~Aaa~IQa~~R~~~~R~r~l~~r~~~~~~lq~~~~~~~~ar~~~~~~~--~~  682 (846)
                         .+.++....+..+|+|+++||++++++|++||++||.+.++++..+..... ...+       ........|+  .+
T Consensus       732 ---~e~s~~~~~~~~sl~Dtl~avrdAa~aa~r~q~vfr~~~~~~~~a~~i~~~-~~~~-------i~~~~~~~m~~~~a  800 (975)
T KOG0520|consen  732 ---SEGSPNPDEDSDSLKDTLAAVRDAAQAAARIQAVFRAQSFQKKQAREIMDA-TKEQ-------ISEELAVSMKASSA  800 (975)
T ss_pred             ---CCCCCCCCccccccccccccccchHHHHHhhhhhhhhhhhhhhhHHHHHhh-cchh-------hhhhhhhhhhcccc
Confidence               233334556666799999999999999999999999999998888754443 1111       2334444444  33


Q ss_pred             HH--hHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhhhhhccc
Q 044976          683 FR--NARDHNSAALSIQKKYRGWKGRKDYLAIRQKVVKIQAHVRGYQVRKKYKVI-WAVGVLDKVILRWRRKGVGLRGFR  759 (846)
Q Consensus       683 ~~--~~~~~~~aAi~IQ~~~R~~~~Rk~~~~~r~aai~IQa~~Rg~~~Rk~y~~~-~aa~~IQk~ir~~r~r~~~~r~~r  759 (846)
                      ++  ..+....+|..||.+||+|+.|+.|+.+|+.+++||+++||++.|+.|+++ |++.++.+.+.+||+++++||+|+
T Consensus       801 ~~~~~~r~~~~aa~~iq~~f~~yk~r~~~l~tr~p~v~iqa~~rg~q~r~dy~ki~wSv~~lek~~lrwR~k~~g~Rgfk  880 (975)
T KOG0520|consen  801 FSMCDDRSDPAAASRIQKKFRGYKQRKEFLSTRQPIVKIQAAVRGYQVRKDYRKITWSVGVLEKLILRWRRKGKGFRGFK  880 (975)
T ss_pred             hhcCccccchhHHHHhhhhhhhHHhhhhhcccCCccccchhhhhchhHhhhhheechhhhHHHHHHHHHHHhhhhhcccc
Confidence            32  224566789999999999999999999999999999999999999999999 999999999999999999999999


Q ss_pred             cccccc-cc------hhhHHHHHHHHHHHHHHHHhHHHHHHHHHhhcHHHHHHHHHHHHHHHHHHHHc
Q 044976          760 PETESN-DE------SDDEDILKVFRRQKVDATIDESVSRVLSMVDSPTARNQYRRMLERYRQAKAEL  820 (846)
Q Consensus       760 ~~~~~i-q~------~~~r~~~~~~R~q~~~~~~~~a~~~iQs~~R~~~aR~~y~rl~~~~~~~~~~~  820 (846)
                      .+.... |+      +++++|||..|++.+++ +.+|+++||+|+|++++|.+|+|++.-+++.+...
T Consensus       881 ~~~~~e~~~~a~t~~e~~yd~yKq~~~~~~~r-~~~A~~~VQsm~rs~~a~qqyrR~~~~~~~~~~~~  947 (975)
T KOG0520|consen  881 GRALFEEQETAATVIEDCYDFYKQLRKQTEER-LTRAVVRVQSMFRSPKAQQQYRRLLLVYEQYQESY  947 (975)
T ss_pred             cccchhccccccchHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhhh
Confidence            776332 22      57889999999999998 99999999999999999999999999998888765

>PF03859 CG-1: CG-1 domain; InterPro: IPR005559 CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein []	Back alignment and domain information

>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PHA02875 ankyrin repeat protein; Provisional	Back alignment and domain information

>PHA02791 ankyrin-like protein; Provisional	Back alignment and domain information

>PHA03095 ankyrin-like protein; Provisional	Back alignment and domain information

>PHA03100 ankyrin repeat protein; Provisional	Back alignment and domain information

>PHA03095 ankyrin-like protein; Provisional	Back alignment and domain information

>PHA02878 ankyrin repeat protein; Provisional	Back alignment and domain information

>PHA02876 ankyrin repeat protein; Provisional	Back alignment and domain information

>PHA02716 CPXV016; CPX019; EVM010; Provisional	Back alignment and domain information

>PHA03100 ankyrin repeat protein; Provisional	Back alignment and domain information

>PHA02946 ankyin-like protein; Provisional	Back alignment and domain information

>PHA02874 ankyrin repeat protein; Provisional	Back alignment and domain information

>PHA02791 ankyrin-like protein; Provisional	Back alignment and domain information

>PHA02946 ankyin-like protein; Provisional	Back alignment and domain information

>PHA02876 ankyrin repeat protein; Provisional	Back alignment and domain information

>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]	Back alignment and domain information

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]	Back alignment and domain information

>PHA02989 ankyrin repeat protein; Provisional	Back alignment and domain information

>PHA02874 ankyrin repeat protein; Provisional	Back alignment and domain information

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]	Back alignment and domain information

>PHA02875 ankyrin repeat protein; Provisional	Back alignment and domain information

>PHA02989 ankyrin repeat protein; Provisional	Back alignment and domain information

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]	Back alignment and domain information

>KOG0508 consensus Ankyrin repeat protein [General function prediction only]	Back alignment and domain information

>PHA02798 ankyrin-like protein; Provisional	Back alignment and domain information

>PHA02716 CPXV016; CPX019; EVM010; Provisional	Back alignment and domain information

>PHA02917 ankyrin-like protein; Provisional	Back alignment and domain information

>PHA02878 ankyrin repeat protein; Provisional	Back alignment and domain information

>PHA02798 ankyrin-like protein; Provisional	Back alignment and domain information

>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]	Back alignment and domain information

>PHA02917 ankyrin-like protein; Provisional	Back alignment and domain information

>PHA02795 ankyrin-like protein; Provisional	Back alignment and domain information

>PHA02730 ankyrin-like protein; Provisional	Back alignment and domain information

>PHA02859 ankyrin repeat protein; Provisional	Back alignment and domain information

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]	Back alignment and domain information

>KOG0508 consensus Ankyrin repeat protein [General function prediction only]	Back alignment and domain information

>PHA02730 ankyrin-like protein; Provisional	Back alignment and domain information

>PHA02743 Viral ankyrin protein; Provisional	Back alignment and domain information

>PHA02795 ankyrin-like protein; Provisional	Back alignment and domain information

>PHA02859 ankyrin repeat protein; Provisional	Back alignment and domain information

>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]	Back alignment and domain information

>PHA02792 ankyrin-like protein; Provisional	Back alignment and domain information

>PLN03192 Voltage-dependent potassium channel; Provisional	Back alignment and domain information

>TIGR00870 trp transient-receptor-potential calcium channel protein	Back alignment and domain information

>PHA02741 hypothetical protein; Provisional	Back alignment and domain information

>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]	Back alignment and domain information

>PHA02884 ankyrin repeat protein; Provisional	Back alignment and domain information

>KOG0514 consensus Ankyrin repeat protein [General function prediction only]	Back alignment and domain information

>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]	Back alignment and domain information

>PHA02736 Viral ankyrin protein; Provisional	Back alignment and domain information

>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]	Back alignment and domain information

>PLN03192 Voltage-dependent potassium channel; Provisional	Back alignment and domain information

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain	Back alignment and domain information

>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]	Back alignment and domain information

>PHA02741 hypothetical protein; Provisional	Back alignment and domain information

>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]	Back alignment and domain information

>TIGR00870 trp transient-receptor-potential calcium channel protein	Back alignment and domain information

>PHA02743 Viral ankyrin protein; Provisional	Back alignment and domain information

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]	Back alignment and domain information

>KOG0514 consensus Ankyrin repeat protein [General function prediction only]	Back alignment and domain information

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain	Back alignment and domain information

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]	Back alignment and domain information

>PHA02884 ankyrin repeat protein; Provisional	Back alignment and domain information

>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]	Back alignment and domain information

>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]	Back alignment and domain information

>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]	Back alignment and domain information

>PHA02792 ankyrin-like protein; Provisional	Back alignment and domain information

>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]	Back alignment and domain information

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins	Back alignment and domain information

>PHA02736 Viral ankyrin protein; Provisional	Back alignment and domain information

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]	Back alignment and domain information

>KOG4214 consensus Myotrophin and similar proteins [Transcription]	Back alignment and domain information

>KOG4214 consensus Myotrophin and similar proteins [Transcription]	Back alignment and domain information

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A	Back alignment and domain information

>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins	Back alignment and domain information

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]	Back alignment and domain information

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A	Back alignment and domain information

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional	Back alignment and domain information

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A	Back alignment and domain information

>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]	Back alignment and domain information

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional	Back alignment and domain information

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A	Back alignment and domain information

>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]	Back alignment and domain information

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]	Back alignment and domain information

>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]	Back alignment and domain information

>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]	Back alignment and domain information

>cd01175 IPT_COE IPT domain of the COE family (Col/Olf-1/EBF) of non-basic, helix-loop-helix (HLH)-containing transcription factors	Back alignment and domain information

>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]	Back alignment and domain information

>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]	Back alignment and domain information

>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]	Back alignment and domain information

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]	Back alignment and domain information

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]	Back alignment and domain information

>PF13606 Ank_3: Ankyrin repeat	Back alignment and domain information

>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]	Back alignment and domain information

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]	Back alignment and domain information

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature	Back alignment and domain information

>KOG0522 consensus Ankyrin repeat protein [General function prediction only]	Back alignment and domain information

>PF13606 Ank_3: Ankyrin repeat	Back alignment and domain information

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature	Back alignment and domain information

>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]	Back alignment and domain information

>PF01833 TIG: IPT/TIG domain; InterPro: IPR002909 This family consists of a domain that has an immunoglobulin like fold	Back alignment and domain information

>KOG0522 consensus Ankyrin repeat protein [General function prediction only]	Back alignment and domain information

>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]	Back alignment and domain information

>cd01179 IPT_plexin_repeat2 Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR)	Back alignment and domain information

>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]	Back alignment and domain information

>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]	Back alignment and domain information

>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]	Back alignment and domain information

>cd00102 IPT Immunoglobulin-like fold, Plexins, Transcription factors (IPT)	Back alignment and domain information

>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton]	Back alignment and domain information

>KOG0511 consensus Ankyrin repeat protein [General function prediction only]	Back alignment and domain information

>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]	Back alignment and domain information

>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]	Back alignment and domain information

>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]	Back alignment and domain information

>cd00603 IPT_PCSR IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins	Back alignment and domain information

>cd01180 IPT_plexin_repeat1 First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR)	Back alignment and domain information

>KOG0511 consensus Ankyrin repeat protein [General function prediction only]	Back alignment and domain information

>COG5022 Myosin heavy chain [Cytoskeleton]	Back alignment and domain information

>COG5022 Myosin heavy chain [Cytoskeleton]	Back alignment and domain information

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]	Back alignment and domain information

>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K	Back alignment and domain information

>smart00429 IPT ig-like, plexins, transcription factors	Back alignment and domain information

>cd01181 IPT_plexin_repeat3 Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR)	Back alignment and domain information

>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]	Back alignment and domain information

>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K	Back alignment and domain information

>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]	Back alignment and domain information

>KOG2505 consensus Ankyrin repeat protein [General function prediction only]	Back alignment and domain information

>smart00248 ANK ankyrin repeats	Back alignment and domain information

>PTZ00014 myosin-A; Provisional	Back alignment and domain information

>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton]	Back alignment and domain information

>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues	Back alignment and domain information

>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues	Back alignment and domain information

>smart00248 ANK ankyrin repeats	Back alignment and domain information

>cd02849 CGTase_C_term Cgtase (cyclodextrin glycosyltransferase) C-terminus domain	Back alignment and domain information

>PTZ00014 myosin-A; Provisional	Back alignment and domain information

>KOG2505 consensus Ankyrin repeat protein [General function prediction only]	Back alignment and domain information

>cd00604 IPT_CGTD IPT domain (domain D) of cyclodextrin glycosyltransferase (CGTase) and similar enzymes	Back alignment and domain information

>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]	Back alignment and domain information

>PF08549 SWI-SNF_Ssr4: Fungal domain of unknown function (DUF1750); InterPro: IPR013859 This is a fungal protein of unknown function	Back alignment and domain information

>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]	Back alignment and domain information

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC	Back alignment and domain information

>KOG3610 consensus Plexins (functional semaphorin receptors) [Signal transduction mechanisms]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		846
2cxk_A		95	Crystal Structure Of The Tig Domain Of Human Calmod		4e-08
4gmr_A		169	Crystal Structure Of Engineered Protein. Northeast		2e-05
4hb5_A		169	Crystal Structure Of Engineered Protein. Northeast		4e-05
4hqd_A		169	Crystal Structure Of Engineered Protein. Northeast		7e-05
2ix7_C		58	Structure Of Apo-Calmodulin Bound To Unconventional		4e-04
2dfs_A		1080	3-D Structure Of Myosin-V Inhibited State Length =		5e-04
1n0q_A		93	3ank: A Designed Ankyrin Repeat Protein With Three		8e-04
1n0r_A		126	4ank: A Designed Ankyrin Repeat Protein With Four I		8e-04

>pdb|2CXK|A Chain A, Crystal Structure Of The Tig Domain Of Human Calmodulin- Binding Transcription Activator 1 (Camta1) Length = 95