Citrus Sinensis ID: 045056
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 299 | ||||||
| 224061883 | 449 | predicted protein [Populus trichocarpa] | 0.959 | 0.639 | 0.484 | 4e-65 | |
| 356536997 | 466 | PREDICTED: vinorine synthase-like [Glyci | 0.979 | 0.628 | 0.442 | 7e-64 | |
| 255584551 | 471 | 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltr | 0.996 | 0.632 | 0.435 | 2e-63 | |
| 255578623 | 443 | Salutaridinol 7-O-acetyltransferase, put | 0.939 | 0.634 | 0.446 | 2e-61 | |
| 255578621 | 460 | Anthranilate N-benzoyltransferase protei | 0.979 | 0.636 | 0.466 | 2e-61 | |
| 255566100 | 468 | 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltr | 0.983 | 0.628 | 0.44 | 1e-59 | |
| 351721226 | 456 | uncharacterized protein LOC100305374 [Gl | 0.953 | 0.625 | 0.442 | 4e-58 | |
| 224086030 | 435 | predicted protein [Populus trichocarpa] | 0.916 | 0.629 | 0.446 | 1e-57 | |
| 359492333 | 445 | PREDICTED: vinorine synthase-like [Vitis | 0.949 | 0.638 | 0.45 | 2e-55 | |
| 302141686 | 631 | unnamed protein product [Vitis vinifera] | 0.949 | 0.450 | 0.45 | 3e-55 |
| >gi|224061883|ref|XP_002300646.1| predicted protein [Populus trichocarpa] gi|222842372|gb|EEE79919.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 145/299 (48%), Positives = 198/299 (66%), Gaps = 12/299 (4%)
Query: 1 MEVEIISRECIKPSSPTPLHLKTYKFSLLDQFRNHIFAPRVLYYPLINLSDASVIDHIVS 60
MEV+IIS++ ++PSSPTP HL+ +K SLLDQ +AP +LYYP+ + S AS +D V
Sbjct: 1 MEVQIISKQNVRPSSPTPPHLRNFKLSLLDQLIPVPYAPLLLYYPMNDNSGASNLD--VP 58
Query: 61 KRLQLLKQSLSETLVRFYPLAGKMTENFSINCNDEGIYFVEARAKSPLNEFLNKPDPSLT 120
KRL +LK+SLSETL FYPLAGK+ + SI+CNDEG Y+VEA+ L+EFL +PD L
Sbjct: 59 KRLGVLKKSLSETLTHFYPLAGKIKDELSIDCNDEGAYYVEAQVNCHLSEFLRQPDLLLV 118
Query: 121 HKFFPVEGSESLTGRIAGAHVAKVQITSFPCGGLVICSCFSHMFGDGTSFSLFMKSWAAT 180
++FFP E L + A HVA Q+ F CGG+ I C SH+ DG + S F+K+W+AT
Sbjct: 119 NQFFPCE----LLPK-AVTHVANFQVNVFECGGIAIGICISHLILDGAALSTFLKAWSAT 173
Query: 181 ARKSNTGAAVMCPNFDASILFPPNEAYPRELNWNSLFTRFFETGRFVMRRFVFDAKAIAD 240
A+ S A++ P F S LFP N+ + R+ + +F F+ G V +RFVFDA +I+
Sbjct: 174 AKGSRE--AIIYPEFIPSSLFPANDLWLRD-SAVVMFGSLFKKGNGVTKRFVFDASSISI 230
Query: 241 LKAKAIISSCVQNPTRVEVVSALLSKHIM-ATFKLKSGPHKPTLLTHVVNLRPKARPPL 298
L+A+A S V+ PTRVEVVS+ L K IM A+ + + +P+LLTH+VNLR K P L
Sbjct: 231 LRAQA-ASLGVKCPTRVEVVSSFLWKCIMAASEEWRGSQRRPSLLTHLVNLRRKMEPKL 288
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356536997|ref|XP_003537018.1| PREDICTED: vinorine synthase-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|255584551|ref|XP_002533002.1| 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative [Ricinus communis] gi|223527213|gb|EEF29377.1| 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|255578623|ref|XP_002530173.1| Salutaridinol 7-O-acetyltransferase, putative [Ricinus communis] gi|223530334|gb|EEF32228.1| Salutaridinol 7-O-acetyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|255578621|ref|XP_002530172.1| Anthranilate N-benzoyltransferase protein, putative [Ricinus communis] gi|223530333|gb|EEF32227.1| Anthranilate N-benzoyltransferase protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|255566100|ref|XP_002524038.1| 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative [Ricinus communis] gi|223536765|gb|EEF38406.1| 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|351721226|ref|NP_001238226.1| uncharacterized protein LOC100305374 [Glycine max] gi|245053180|gb|ACS94570.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|224086030|ref|XP_002307785.1| predicted protein [Populus trichocarpa] gi|222857234|gb|EEE94781.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|359492333|ref|XP_002284817.2| PREDICTED: vinorine synthase-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|302141686|emb|CBI18889.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 299 | ||||||
| TAIR|locus:2092090 | 442 | AT3G26040 [Arabidopsis thalian | 0.943 | 0.638 | 0.356 | 3.3e-40 | |
| TAIR|locus:2130065 | 446 | AT4G15390 [Arabidopsis thalian | 0.919 | 0.616 | 0.350 | 8e-37 | |
| TAIR|locus:2102936 | 443 | AT3G30280 [Arabidopsis thalian | 0.929 | 0.627 | 0.332 | 7.4e-34 | |
| TAIR|locus:2024061 | 436 | AT1G24420 [Arabidopsis thalian | 0.919 | 0.630 | 0.340 | 2.3e-32 | |
| TAIR|locus:2024036 | 435 | AT1G24430 [Arabidopsis thalian | 0.923 | 0.634 | 0.324 | 1.2e-28 | |
| TAIR|locus:2152763 | 443 | AT5G47980 [Arabidopsis thalian | 0.916 | 0.618 | 0.331 | 2.3e-26 | |
| TAIR|locus:2152783 | 426 | AT5G47950 [Arabidopsis thalian | 0.879 | 0.617 | 0.318 | 6.6e-26 | |
| TAIR|locus:2178667 | 428 | AT5G23970 [Arabidopsis thalian | 0.906 | 0.633 | 0.295 | 1e-24 | |
| TAIR|locus:2130075 | 435 | BIA1 "BRASSINOSTEROID INACTIVA | 0.812 | 0.558 | 0.301 | 1.4e-22 | |
| TAIR|locus:2151376 | 461 | AT5G17540 [Arabidopsis thalian | 0.906 | 0.587 | 0.262 | 2.8e-14 |
| TAIR|locus:2092090 AT3G26040 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 106/297 (35%), Positives = 144/297 (48%)
Query: 1 MEVEIISRECIKPSSPTPLHLKTYKFSLLDQFRNHIFAPRVLYYPLINLSDASVIDHIVX 60
M V+++SR+ IKPSSPTP HLK +K SLL+Q IF P V +Y N S+
Sbjct: 1 MRVDVVSRDIIKPSSPTPNHLKKFKLSLLEQLGPTIFGPMVFFYSANN----SIKP---T 53
Query: 61 XXXXXXXXXXXETLVRFYPLAGKMTENFSINCNDEGIYFVEARAKSPLNEFLNKPDPSLT 120
ETL FYPLAG++ N SI+CND G F+EAR SPL+ L +P
Sbjct: 54 EQLQMLKKSLSETLTHFYPLAGRLKGNISIDCNDSGADFLEARVNSPLSNLLLEPSSDSL 113
Query: 121 HKFFPVEGSESLTGRIAGAHVAKVQITSFPCGGLVICSCFSHMFGDGTSFSLFMKSWAAT 180
+ P +S+ R + Q + F CG + I C SH D TS LFMKSWAA
Sbjct: 114 QQLIPTS-VDSIETR---TRLLLAQASFFECGSMSIGVCISHKLADATSIGLFMKSWAAI 169
Query: 181 ARKSNTGAAVMCPNFDASILFPPNEAYPRELNWNSLFTRFFETGRFVMRRFVFXXXXXXX 240
+ + + + P FD +FPP E + + + + +RF+F
Sbjct: 170 SSRGSI-KTIGAPVFDTVKIFPPGNF--SETSPAPVVEPEIMMNQTLSKRFIFDSSSIQA 226
Query: 241 XXXXXXXSSCVQNPTRVEVVSALLSKHIMATFKLKSGPHKPTLLTHVVNLRPKARPP 297
V PTRVE VSAL+ K M + SG KP++L + V+LR + PP
Sbjct: 227 LQAKASSFE-VNQPTRVEAVSALIWKSAMKATRTVSGTSKPSILANSVSLRSRVSPP 282
|
|
| TAIR|locus:2130065 AT4G15390 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2102936 AT3G30280 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2024061 AT1G24420 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2024036 AT1G24430 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2152763 AT5G47980 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2152783 AT5G47950 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2178667 AT5G23970 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2130075 BIA1 "BRASSINOSTEROID INACTIVATOR1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2151376 AT5G17540 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 299 | |||
| PLN00140 | 444 | PLN00140, PLN00140, alcohol acetyltransferase fami | 1e-66 | |
| pfam02458 | 432 | pfam02458, Transferase, Transferase family | 1e-62 | |
| PLN02481 | 436 | PLN02481, PLN02481, Omega-hydroxypalmitate O-ferul | 4e-28 | |
| PLN03157 | 447 | PLN03157, PLN03157, spermidine hydroxycinnamoyl tr | 7e-21 | |
| PLN02663 | 431 | PLN02663, PLN02663, hydroxycinnamoyl-CoA:shikimate | 4e-12 |
| >gnl|CDD|165708 PLN00140, PLN00140, alcohol acetyltransferase family protein; Provisional | Back alignment and domain information |
|---|
Score = 214 bits (547), Expect = 1e-66
Identities = 119/303 (39%), Positives = 170/303 (56%), Gaps = 19/303 (6%)
Query: 1 MEVEIISRECIKPSSPTPLHLKTYKFSLLDQFRNHIFAPRVLYYPLINLSDASVIDHIVS 60
MEV IISRE IKPSSP+ HLK +K SLLDQ + P + +YP N +
Sbjct: 1 MEVSIISRELIKPSSPSIHHLKPFKLSLLDQLTPTTYIPMIFFYPTNNNQNF-------- 52
Query: 61 KRLQL---LKQSLSETLVRFYPLAGKMTENFSINCNDEGIYFVEARAKSPLNEFLNKPDP 117
K LQ+ LK+SLSETL FYP +G++ +N I+ +EG+ F E R K L++FL P
Sbjct: 53 KGLQISIQLKRSLSETLSTFYPFSGRVKDNLIIDNYEEGVPFFETRVKGSLSDFLKHPQL 112
Query: 118 SLTHKFFPVEGSESLTGRIAGAHVAKVQITSFPCGGLVICSCFSHMFGDGTSFSLFMKSW 177
L +KF P + + A VA +Q+ +F CGG+ + CFSH D + S F+ SW
Sbjct: 113 ELLNKFLPCQPFSYESDPEAIPQVA-IQVNTFDCGGIALGLCFSHKIIDAATASAFLDSW 171
Query: 178 AATARKSNTGAAVMCPNFD-ASILFPPNEAYPRE-LNWNSLFTRFFETGRFVMRRFVFDA 235
AA R + V+ P+ AS FPP ++P + L + +F ++ +RFVFDA
Sbjct: 172 AANTRGHYS--EVINPDLFEASSFFPPLNSFPVQFLLL--MEENWFFKENYITKRFVFDA 227
Query: 236 KAIADLKAKAIISSCVQNPTRVEVVSALLSKHIMATFKLKSGPHKPTLLTHVVNLRPKAR 295
KAIA L+AKA S V NP+R+E +S + K A + S +P++ H VN+R + +
Sbjct: 228 KAIATLRAKA-KSKRVPNPSRIETLSCFIWKCCTAASRSISAAPRPSISVHAVNIRQRTK 286
Query: 296 PPL 298
PP+
Sbjct: 287 PPM 289
|
Length = 444 |
| >gnl|CDD|217048 pfam02458, Transferase, Transferase family | Back alignment and domain information |
|---|
| >gnl|CDD|215266 PLN02481, PLN02481, Omega-hydroxypalmitate O-feruloyl transferase | Back alignment and domain information |
|---|
| >gnl|CDD|178702 PLN03157, PLN03157, spermidine hydroxycinnamoyl transferase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|166304 PLN02663, PLN02663, hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 299 | |||
| PLN00140 | 444 | alcohol acetyltransferase family protein; Provisio | 100.0 | |
| PLN03157 | 447 | spermidine hydroxycinnamoyl transferase; Provision | 100.0 | |
| PLN02663 | 431 | hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinn | 100.0 | |
| PLN02481 | 436 | Omega-hydroxypalmitate O-feruloyl transferase | 100.0 | |
| PF02458 | 432 | Transferase: Transferase family; InterPro: IPR0034 | 100.0 | |
| PRK09294 | 416 | acyltransferase PapA5; Provisional | 98.81 | |
| COG4908 | 439 | Uncharacterized protein containing a NRPS condensa | 97.95 | |
| TIGR02946 | 446 | acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT. This b | 97.81 | |
| PF00668 | 301 | Condensation: Condensation domain; InterPro: IPR00 | 97.8 | |
| PF07247 | 480 | AATase: Alcohol acetyltransferase; InterPro: IPR01 | 97.54 | |
| PF03007 | 263 | WES_acyltransf: Wax ester synthase-like Acyl-CoA a | 97.12 | |
| PRK12316 | 5163 | peptide synthase; Provisional | 96.04 | |
| PRK12467 | 3956 | peptide synthase; Provisional | 95.86 | |
| PRK12467 | 3956 | peptide synthase; Provisional | 95.82 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 95.02 | |
| PRK12316 | 5163 | peptide synthase; Provisional | 94.94 | |
| PRK05691 | 4334 | peptide synthase; Validated | 94.1 | |
| PRK05691 | 4334 | peptide synthase; Validated | 94.02 | |
| PRK13757 | 219 | chloramphenicol acetyltransferase; Provisional | 81.19 |
| >PLN00140 alcohol acetyltransferase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-59 Score=444.40 Aligned_cols=286 Identities=39% Similarity=0.668 Sum_probs=231.1
Q ss_pred CceEEEeeeEeeCCCCCCCCCceeecCcCccccccCCccEEEEecCCCCCCCcccchhhhHHHHHHHHHHHHhhhccccc
Q 045056 1 MEVEIISRECIKPSSPTPLHLKTYKFSLLDQFRNHIFAPRVLYYPLINLSDASVIDHIVSKRLQLLKQSLSETLVRFYPL 80 (299)
Q Consensus 1 ~~v~i~~~~~V~P~~~~~~~~~~~~LS~lD~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~L 80 (299)
|+|+++++++|+|+.|||.+.+.++||.|||.+++.|++.+|||+.+.... ++. ...+++||+||+++|++||||
T Consensus 1 ~~v~~~s~~~V~Ps~ptp~~~~~~~LS~lD~~~~~~~~~~~~fY~~~~~~~--~~~---~~~~~~Lk~sLs~~L~~fypl 75 (444)
T PLN00140 1 MEVSIISRELIKPSSPSIHHLKPFKLSLLDQLTPTTYIPMIFFYPTNNNQN--FKG---LQISIQLKRSLSETLSTFYPF 75 (444)
T ss_pred CeeEEeccceeccCCCCccccccCCCChHHhcccccccceEEEeeCCCccc--ccc---hhHHHHHHHHHHHHHhhhhcc
Confidence 899999999999999999877789999999988899999999999764310 112 367899999999999999999
Q ss_pred ceeecCCceEecCCCCeeEEEEEEcCChhhhcCCCCcccccccccCCCCCC--ccccccCcce-eEEEEEEecCCeEEEE
Q 045056 81 AGKMTENFSINCNDEGIYFVEARAKSPLNEFLNKPDPSLTHKFFPVEGSES--LTGRIAGAHV-AKVQITSFPCGGLVIC 157 (299)
Q Consensus 81 aGrl~~~~~i~~~~~gv~f~~a~~~~~~~dl~~~p~~~~~~~l~p~~~~~~--~~g~~~~~~P-l~vQvt~f~cGG~~lg 157 (299)
||||+.+++|+||++||.|+||+++++++|+...|+...+++|+|...... .. .+.| ++||||+|+|||++||
T Consensus 76 AGRl~~~~~i~cn~~Gv~fveA~~~~~l~d~l~~~~~~~~~~l~p~~~~~~~~~~----~~~Pll~vQvT~F~cGG~~lG 151 (444)
T PLN00140 76 SGRVKDNLIIDNYEEGVPFFETRVKGSLSDFLKHPQLELLNKFLPCQPFSYESDP----EAIPQVAIQVNTFDCGGIALG 151 (444)
T ss_pred CccccCCceeEccCCCceEEEEEecCcHHHhcCCCCHHHHHhhCCCCcccccCCc----cCCceEEEEEEEeccCcEEEE
Confidence 999998899999999999999999999999977665445677888643211 11 3478 9999999999999999
Q ss_pred eeecceecchhhHHHHHHHHHHHHhcCCCCCCccCCCcCCc-cccCCCCCCcCcccccccccccccCCCeEEEEEEEcHH
Q 045056 158 SCFSHMFGDGTSFSLFMKSWAATARKSNTGAAVMCPNFDAS-ILFPPNEAYPRELNWNSLFTRFFETGRFVMRRFVFDAK 236 (299)
Q Consensus 158 ~~~~H~v~Dg~~~~~fl~~Wa~~~rg~~~~~~~~~P~~dr~-~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~f~~s~~ 236 (299)
+++||.++||.|+.+||++||++|||.. .....|.+||. .+.+++..+.... ....+..+....+++.++|+|+++
T Consensus 152 ~~~~H~v~Dg~s~~~Fl~~WA~~~rg~~--~~~~~P~~dr~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~v~~~f~fs~~ 228 (444)
T PLN00140 152 LCFSHKIIDAATASAFLDSWAANTRGHY--SEVINPDLFEASSFFPPLNSFPVQF-LLLMEENWFFKENYITKRFVFDAK 228 (444)
T ss_pred eeeceEcccHHHHHHHHHHHHHHhcCCC--CCCCCcccccccccCCCCCcccccc-cccccccccccCceEEEEEEECHH
Confidence 9999999999999999999999999975 44578999996 3444432211100 000111112335688999999999
Q ss_pred HHHHHHHHhhhcCCCCCCceehhhHHHHHHHHHhhccCCCCCCCceEEEEEecCCCCCCCCCC
Q 045056 237 AIADLKAKAIISSCVQNPTRVEVVSALLSKHIMATFKLKSGPHKPTLLTHVVNLRPKARPPLP 299 (299)
Q Consensus 237 ~l~~Lk~~a~~~~~~~~~St~dal~A~~W~~~~rar~~~~~~~~~~~l~~~vd~R~rl~pplP 299 (299)
+|++||+.+. ..+..++|++|+|+||+|+|++||+....+.++.+.+.++||+|+|++||||
T Consensus 229 ~I~~LK~~~~-~~~~~~~S~~e~vsA~iWr~~~rA~~~~~~~~~~~~~~~~vn~R~Rl~PpLP 290 (444)
T PLN00140 229 AIATLRAKAK-SKRVPNPSRIETLSCFIWKCCTAASRSISAAPRPSISVHAVNIRQRTKPPMS 290 (444)
T ss_pred HHHHHHHhcc-cccCCCCchhHHHHHHHHHHHHHHhhhccCCCCceEEEEEEeccccCCCCCC
Confidence 9999999997 5444579999999999999999996532222468899999999999999998
|
|
| >PLN03157 spermidine hydroxycinnamoyl transferase; Provisional | Back alignment and domain information |
|---|
| >PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase | Back alignment and domain information |
|---|
| >PLN02481 Omega-hydroxypalmitate O-feruloyl transferase | Back alignment and domain information |
|---|
| >PF02458 Transferase: Transferase family; InterPro: IPR003480 This family includes a number of transferase enzymes | Back alignment and domain information |
|---|
| >PRK09294 acyltransferase PapA5; Provisional | Back alignment and domain information |
|---|
| >COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR02946 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT | Back alignment and domain information |
|---|
| >PF00668 Condensation: Condensation domain; InterPro: IPR001242 This domain is found in many multi-domain enzymes which synthesize peptide antibiotics | Back alignment and domain information |
|---|
| >PF07247 AATase: Alcohol acetyltransferase; InterPro: IPR010828 This family contains a number of alcohol acetyltransferase (2 | Back alignment and domain information |
|---|
| >PF03007 WES_acyltransf: Wax ester synthase-like Acyl-CoA acyltransferase domain; InterPro: IPR004255 This entry represents the N terminus (approximately 170 residues) of a number of hypothetical plant proteins | Back alignment and domain information |
|---|
| >PRK12316 peptide synthase; Provisional | Back alignment and domain information |
|---|
| >PRK12467 peptide synthase; Provisional | Back alignment and domain information |
|---|
| >PRK12467 peptide synthase; Provisional | Back alignment and domain information |
|---|
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
| >PRK12316 peptide synthase; Provisional | Back alignment and domain information |
|---|
| >PRK05691 peptide synthase; Validated | Back alignment and domain information |
|---|
| >PRK05691 peptide synthase; Validated | Back alignment and domain information |
|---|
| >PRK13757 chloramphenicol acetyltransferase; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 299 | ||||
| 2bgh_A | 421 | Crystal Structure Of Vinorine Synthase Length = 421 | 1e-33 | ||
| 4g2m_A | 439 | Structure Of A Lys-Hct Mutant From Coffea Canephora | 5e-10 | ||
| 4g0b_A | 436 | Structure Of Native Hct From Coffea Canephora Lengt | 5e-10 | ||
| 4g22_A | 439 | Structure Of A Lys-Hct Mutant From Coffea Canephora | 7e-09 | ||
| 2e1v_A | 454 | Crystal Structure Of Dendranthema Morifolium Dmat, | 1e-05 | ||
| 2e1t_A | 454 | Crystal Structure Of Dendranthema Morifolium Dmat C | 2e-05 |
| >pdb|2BGH|A Chain A, Crystal Structure Of Vinorine Synthase Length = 421 | Back alignment and structure |
|
| >pdb|4G2M|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora (Crystal Form 2) Length = 439 | Back alignment and structure |
| >pdb|4G0B|A Chain A, Structure Of Native Hct From Coffea Canephora Length = 436 | Back alignment and structure |
| >pdb|4G22|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora (Crystal Form 1) Length = 439 | Back alignment and structure |
| >pdb|2E1V|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat, Seleno- Methionine Derivative Length = 454 | Back alignment and structure |
| >pdb|2E1T|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat Complexed With Malonyl-coa Length = 454 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 299 | |||
| 2bgh_A | 421 | Vinorine synthase; VS, BAHD, acetyltransferase, au | 3e-83 | |
| 4g22_A | 439 | Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn | 2e-77 | |
| 2xr7_A | 453 | Malonyltransferase; xenobiotics, naphthols; HET: M | 3e-63 | |
| 2e1v_A | 454 | Acyl transferase; BAHD superfamily, seleno-methion | 1e-60 | |
| 2rkv_A | 451 | Trichothecene 3-O-acetyltransferase; BAHD superfam | 4e-39 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-05 |
| >2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina} Length = 421 | Back alignment and structure |
|---|
Score = 255 bits (654), Expect = 3e-83
Identities = 100/300 (33%), Positives = 144/300 (48%), Gaps = 16/300 (5%)
Query: 1 MEVEIISRECIKPSSPTPLHLKTYKFSLLDQFRNHIFAPRVLYYPLINLSDASVIDHIVS 60
++E +S E I PSSPTP LK YK S LDQ P +L+YP L
Sbjct: 3 PQMEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPN-PLDSNLDPAQTSQ 61
Query: 61 KRLQLLKQSLSETLVRFYPLAGKMTENFSINCNDEGIYFVEARAKSPLNEFL-NKPDPSL 119
LKQSLS+ L FYPLAG++ N S++CND G+ FVEAR ++ L++ + N +
Sbjct: 62 H----LKQSLSKVLTHFYPLAGRINVNSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEK 117
Query: 120 THKFFPVEGSESLTGRIAGAHVAKVQITSFPCGGLVICSCFSHMFGDGTSFSLFMKSWAA 179
++ P + V+I+ F CGG I SH D S + F+ +W A
Sbjct: 118 LDQYLPSAAYPGGKIEVNEDVPLAVKISFFECGGTAIGVNLSHKIADVLSLATFLNAWTA 177
Query: 180 TARKSNTGAAVMCPNFDASILFPPNEAYPRELNWNSLFTRFFETGRFVMRRFVFDAKAIA 239
T R ++ PNFD + P VM+RFVFD + I
Sbjct: 178 TCR---GETEIVLPNFDLAARHFPPVDNTP-------SPELVPDENVVMKRFVFDKEKIG 227
Query: 240 DLKAKAIISSCVQNPTRVEVVSALLSKHIMATFKLKSGPHKPTLLTHVVNLRPKARPPLP 299
L+A+A +S +N +RV++V A + KH++ + K G ++ VNLR + PPLP
Sbjct: 228 ALRAQASSASEEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNPPLP 287
|
| >4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A Length = 439 | Back alignment and structure |
|---|
| >2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum} Length = 453 | Back alignment and structure |
|---|
| >2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A Length = 454 | Back alignment and structure |
|---|
| >2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A* Length = 451 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 299 | |||
| 4g22_A | 439 | Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn | 100.0 | |
| 2bgh_A | 421 | Vinorine synthase; VS, BAHD, acetyltransferase, au | 100.0 | |
| 2xr7_A | 453 | Malonyltransferase; xenobiotics, naphthols; HET: M | 100.0 | |
| 2e1v_A | 454 | Acyl transferase; BAHD superfamily, seleno-methion | 100.0 | |
| 2rkv_A | 451 | Trichothecene 3-O-acetyltransferase; BAHD superfam | 100.0 | |
| 1q9j_A | 422 | PAPA5, polyketide synthase associated protein 5; c | 98.57 | |
| 2jgp_A | 520 | Tyrocidine synthetase 3; multifunctional enzyme, a | 97.74 | |
| 1l5a_A | 436 | Amide synthase, VIBH; nonribosomal peptide synthet | 97.61 | |
| 4hvm_A | 493 | Tlmii; PSI-biology, midwest center for structural | 97.52 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 96.85 | |
| 2xhg_A | 466 | Tyrocidine synthetase A; isomerase, nonribosomal p | 96.72 | |
| 3fot_A | 519 | 15-O-acetyltransferase; fusarium head blight, tric | 96.55 | |
| 3cla_A | 213 | Type III chloramphenicol acetyltransferase; transf | 85.12 | |
| 2i9d_A | 217 | Chloramphenicol acetyltransferase; structural geno | 84.42 | |
| 1q23_A | 219 | Chloramphenicol acetyltransferase; CAT I, trimer, | 84.14 | |
| 3b8k_A | 239 | PDCE2;, dihydrolipoyllysine-residue acetyltransfer | 82.64 | |
| 1scz_A | 233 | E2, dihydrolipoamide succinyltransferase; COA-depe | 82.17 | |
| 1dpb_A | 243 | Dihydrolipoyl-transacetylase; dihydrolipoamide ace | 82.07 | |
| 3rqc_A | 224 | Probable lipoamide acyltransferase; alpha beta fol | 82.03 | |
| 2ii3_A | 262 | Lipoamide acyltransferase component of branched-C | 81.2 |
| >4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-58 Score=437.44 Aligned_cols=278 Identities=24% Similarity=0.375 Sum_probs=225.6
Q ss_pred CceEEEeeeEeeCCCCCCCCCceeecCcCccccccCCccEEEEecCCCCCCCcccchhhhHHHHHHHHHHHHhhhccccc
Q 045056 1 MEVEIISRECIKPSSPTPLHLKTYKFSLLDQFRNHIFAPRVLYYPLINLSDASVIDHIVSKRLQLLKQSLSETLVRFYPL 80 (299)
Q Consensus 1 ~~v~i~~~~~V~P~~~~~~~~~~~~LS~lD~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~L 80 (299)
|+|+|+++++|+|+.|++. +.++||+||+.+++.|++.+|||+.+... . ...+++||+||+++|++||||
T Consensus 6 ~~V~i~~~~~V~P~~~tp~--~~~~LS~lD~~~~~~~~~~~~~y~~~~~~-----~---~~~~~~Lk~sLs~~L~~f~pl 75 (439)
T 4g22_A 6 MKIEVKESTMVRPAQETPG--RNLWNSNVDLVVPNFHTPSVYFYRPTGSS-----N---FFDAKVLKDALSRALVPFYPM 75 (439)
T ss_dssp CCEEEEEEEEECCSSCCCC--CEECCCHHHHSCCTTCCCEEEEECCCSCT-----T---TTCHHHHHHHHHHHTTTTGGG
T ss_pred eEEEEeeeEEEeCCCCCCC--CeecCChhHhCccccceeeEEEEcCCCCc-----c---ccHHHHHHHHHHHHHhhcccc
Confidence 6899999999999999875 56999999998888999999999975432 1 345899999999999999999
Q ss_pred ceeec----CCceEecCCCCeeEEEEEEcCChhhhcCCCCcccccccccCCCCCCccccccCcce-eEEEEEEecCCeEE
Q 045056 81 AGKMT----ENFSINCNDEGIYFVEARAKSPLNEFLNKPDPSLTHKFFPVEGSESLTGRIAGAHV-AKVQITSFPCGGLV 155 (299)
Q Consensus 81 aGrl~----~~~~i~~~~~gv~f~~a~~~~~~~dl~~~p~~~~~~~l~p~~~~~~~~g~~~~~~P-l~vQvt~f~cGG~~ 155 (299)
||||+ ++++|+||++||.|+||+++++++|+........+++|+|........ .+.| +.||||+|+|||++
T Consensus 76 AGRl~~~~~g~~~i~c~~~Gv~fv~A~~d~~l~~l~~~~p~~~~~~l~p~~~~~~~~----~~~pll~vQvT~f~cGG~~ 151 (439)
T 4g22_A 76 AGRLKRDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTLELRRLIPAVDYSQGI----SSYALLVLQVTYFKCGGVS 151 (439)
T ss_dssp GCEEEECTTSCEEEECCCCCEEEEEEEESSCGGGGTTCCCCGGGGGGSCCCCTTSCT----TSSCSEEEEEEECTTSCEE
T ss_pred ceeeeeCCCCCEEEEECCCCCEEEEEEcCCcHHHhcCCCCCHHHHhcCCCCCccccc----ccCceeEEEEEEecCCCEE
Confidence 99997 479999999999999999999999997632233567788865432222 4678 99999999999999
Q ss_pred EEeeecceecchhhHHHHHHHHHHHHhcCCCCCCccCCCcCCccccCCCCCCcCc---cccccccc---cc----ccC-C
Q 045056 156 ICSCFSHMFGDGTSFSLFMKSWAATARKSNTGAAVMCPNFDASILFPPNEAYPRE---LNWNSLFT---RF----FET-G 224 (299)
Q Consensus 156 lg~~~~H~v~Dg~~~~~fl~~Wa~~~rg~~~~~~~~~P~~dr~~l~~~~~~p~~~---~~~~~~~~---~~----~~~-~ 224 (299)
||+++||.++||.|+.+||++||++|||.. ...+|++||+.+.+ +++|... .++...+. .. ... .
T Consensus 152 lg~~~~H~v~Dg~~~~~Fl~~wa~~~rg~~---~~~~P~~dr~~l~~-~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (439)
T 4g22_A 152 LGVGMRHHAADGFSGLHFINSWSDMARGLD---VTLPPFIDRTLLRA-RDPPQPQFQHIEYQPPPALAVSPQTAASDSVP 227 (439)
T ss_dssp EEEEECTTTCCHHHHHHHHHHHHHHHTTCC---CSSCCBCCGGGGCC-CSSCCCSSCCGGGSCCC---------------
T ss_pred EEEEeeeccCcHHHHHHHHHHHHHHhCCCC---CCCCCccccccccC-CCCCCCCcCcccccCCCCCcccccccccCCcc
Confidence 999999999999999999999999999975 35689999986642 3332211 11111110 00 111 5
Q ss_pred CeEEEEEEEcHHHHHHHHHHhhhcCC-CCCCceehhhHHHHHHHHHhhccCCCCCCCceEEEEEecCCCCCCCCCC
Q 045056 225 RFVMRRFVFDAKAIADLKAKAIISSC-VQNPTRVEVVSALLSKHIMATFKLKSGPHKPTLLTHVVNLRPKARPPLP 299 (299)
Q Consensus 225 ~~~~~~f~~s~~~l~~Lk~~a~~~~~-~~~~St~dal~A~~W~~~~rar~~~~~~~~~~~l~~~vd~R~rl~pplP 299 (299)
++++++|+|++++|++||+++. ++. ..++||||+|+||+|+|++|||...+ ++.+++.++||+|+|++||||
T Consensus 228 ~~~~~~f~fs~~~i~~LK~~a~-~~~~~~~~St~dal~A~iWr~~~rAr~~~~--~~~~~l~~~vd~R~rl~Pplp 300 (439)
T 4g22_A 228 ETAVSIFKLTREQISALKAKSK-EDGNTISYSSYEMLAGHVWRCACKARGLEV--DQGTKLYIATDGRARLRPSLP 300 (439)
T ss_dssp CEEEEEEEECHHHHHHHHHGGG-GGGCCCCCCHHHHHHHHHHHHHHHHTTCCT--TCEEEEEEEEECTTTSSSCCC
T ss_pred cceEEEEEECHHHHHHHHHHhh-ccCCCCCccHHHHHHHHHHHHHHHhcCCCC--CCcEEEEEEEcccCCCCCCCC
Confidence 7899999999999999999998 542 46799999999999999999998644 578999999999999999997
|
| >2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina} | Back alignment and structure |
|---|
| >2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum} | Back alignment and structure |
|---|
| >2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A | Back alignment and structure |
|---|
| >2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A* | Back alignment and structure |
|---|
| >1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2 | Back alignment and structure |
|---|
| >2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis} | Back alignment and structure |
|---|
| >1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2 | Back alignment and structure |
|---|
| >4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus} | Back alignment and structure |
|---|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
| >2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis} | Back alignment and structure |
|---|
| >3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A* | Back alignment and structure |
|---|
| >3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A* | Back alignment and structure |
|---|
| >2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A* | Back alignment and structure |
|---|
| >3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens} | Back alignment and structure |
|---|
| >1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A | Back alignment and structure |
|---|
| >1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A | Back alignment and structure |
|---|
| >3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
| >2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 299 | |||
| d1q9ja1 | 175 | Polyketide synthase associated protein 5, PapA5 {M | 97.44 | |
| d1l5aa1 | 174 | VibH {Vibrio cholerae [TaxId: 666]} | 97.23 | |
| d1q23a_ | 214 | Chloramphenicol acetyltransferase, CAT {Escherichi | 86.91 | |
| d3claa_ | 213 | Chloramphenicol acetyltransferase, CAT {Escherichi | 86.55 | |
| d1q9ja2 | 238 | Polyketide synthase associated protein 5, PapA5 {M | 85.65 |
| >d1q9ja1 c.43.1.2 (A:1-175) Polyketide synthase associated protein 5, PapA5 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-dependent acyltransferases superfamily: CoA-dependent acyltransferases family: NRPS condensation domain (amide synthase) domain: Polyketide synthase associated protein 5, PapA5 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.44 E-value=0.00025 Score=55.31 Aligned_cols=129 Identities=13% Similarity=0.115 Sum_probs=69.9
Q ss_pred eecCcCccccc--cCCccEEEEecCCCCCCCcccchhhhHHHHHHHHHHHHhhhcccccceeecCCceEecCCCCeeEEE
Q 045056 24 YKFSLLDQFRN--HIFAPRVLYYPLINLSDASVIDHIVSKRLQLLKQSLSETLVRFYPLAGKMTENFSINCNDEGIYFVE 101 (299)
Q Consensus 24 ~~LS~lD~~~~--~~y~~~~~~f~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~i~~~~~gv~f~~ 101 (299)
-.|++.++... ..++.. .|..... -.++.|++++..++..+|.|-.++. ..+.|.....
T Consensus 8 r~l~~~e~~~~~~~~~~~~--~~~l~g~-----------ld~~~l~~A~~~lv~rh~~LRt~f~------~~~~~~~~~~ 68 (175)
T d1q9ja1 8 RKLSHSEEVFAQYEVFTSM--TIQLRGV-----------IDVDALSDAFDALLETHPVLASHLE------QSSDGGWNLV 68 (175)
T ss_dssp EECCHHHHHHHHTTCEEEE--EEEEESC-----------CCHHHHHHHHHHHHHHCGGGSEEEE------ECTTSSEEEE
T ss_pred HHhCHHhhhcccCceEEEE--EEEEcCC-----------CCHHHHHHHHHHHHHhchhheEEEE------EeCCeeEEEE
Confidence 35777787653 334433 3444332 2388999999999999999988874 1111211111
Q ss_pred EEEcCC----hhhhcCCCCcccccccccCCCCCCccccccCcce-eEEEEEEecCCeEEEEeeecceecchhhHHHHHHH
Q 045056 102 ARAKSP----LNEFLNKPDPSLTHKFFPVEGSESLTGRIAGAHV-AKVQITSFPCGGLVICSCFSHMFGDGTSFSLFMKS 176 (299)
Q Consensus 102 a~~~~~----~~dl~~~p~~~~~~~l~p~~~~~~~~g~~~~~~P-l~vQvt~f~cGG~~lg~~~~H~v~Dg~~~~~fl~~ 176 (299)
...... ..|.... .......-.+.. .. .+.| ..+.+.. .+++..|.+.+||.++||.|+..|++.
T Consensus 69 ~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~----l~----~~~~l~~~~i~~-~~~~~~l~l~~HH~i~Dg~S~~~ll~e 138 (175)
T d1q9ja1 69 ADDLLHSGICVIDGTAA-TNGSPSGNAELR----LD----QSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVLVDE 138 (175)
T ss_dssp ECCSSSCCCEEEC-------------CCCC----CC----TTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHHHHH
T ss_pred ECCCCCccEEEEEcccc-hhHHHHhhcccC----cc----CCCCeEEEEEEe-cCCeEEEEEEccccccCHhHHHHHHHH
Confidence 110000 0000000 000000000110 11 3445 4444443 358888999999999999999999988
Q ss_pred HHHHH
Q 045056 177 WAATA 181 (299)
Q Consensus 177 Wa~~~ 181 (299)
+.+..
T Consensus 139 l~~~Y 143 (175)
T d1q9ja1 139 LFSRY 143 (175)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87654
|
| >d1l5aa1 c.43.1.2 (A:1-174) VibH {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
| >d1q23a_ c.43.1.1 (A:) Chloramphenicol acetyltransferase, CAT {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d3claa_ c.43.1.1 (A:) Chloramphenicol acetyltransferase, CAT {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1q9ja2 c.43.1.2 (A:181-418) Polyketide synthase associated protein 5, PapA5 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|