Citrus Sinensis ID: 045073

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400--
Protein Sequence
DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETNGLSLEELSGEDKEIAAVTNGIATNGKHEHEDSQMV
Secondary Structure (PSIPRED)
ccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHcHHHHHccHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHcccHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHccHHHHHHHccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHccccccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccccHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHcccccHEEEHHHHHHcccHHHHHHHHHHHHHHHHHHHccHHHcccccccccccccccccccccHHHHHHHHHHHHHHHcccccEEEEEEcccccccccccHHHHHHHHcHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHcccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFlhvynapafnrnhvlsaqpqgDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTdltvatsaypvpvspeastyglfSKEFVQKHglhllgttstwFLLDIAFYTINLaqkdiypatgIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARydslrgkkcdpkkdplheycdgnhAWFMILYGLTLFfanfgpnsttfivpaelfparLRSTCHGISAAAGKAGAIVGAFGVQyytqkgdkqIKQSIITLAVVNFLGFLCSfmvpetnglsleelsgedkEIAAVTNGiatngkhehedsqmv
Flexible Loop (DISEMBL)
DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETNGLSLEELSGEDKEIAAVTNGIatngkhehedsqmv
Low Complexity Region (SEG)
DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHgisaaagkagaivgafgvQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETNGLSLEELSGEDKEIAAVTNGIATNGKHEHEDSQMV
Disordered region (IsUnstruct)
******VIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETNGL*********************************
Disordered Region (DISOPRED)
DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKV*************************FSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETNGLSLEEL****************************
Disordered Region (DISEMBL)
DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETNGLSLEELSGEDKEIAAVTNGIATNG**********
Disordered Region (DISPRO)
DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVP**PEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKC*PK*DPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETNG**********************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETNGLSLEELSGEDKEIAAVTNGIATNGKHEHEDSQMV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	402	2.2.26 [Sep-21-2011]
Q8GYF4	542	Probable inorganic phosph	yes	no	0.910	0.675	0.589	1e-125
Q8VYM2	524	Inorganic phosphate trans	no	no	0.900	0.690	0.600	1e-125
O48639	521	Probable inorganic phosph	no	no	0.900	0.694	0.595	1e-125
Q94DB8	555	Inorganic phosphate trans	yes	no	0.895	0.648	0.589	1e-124
Q7XDZ7	526	Probable inorganic phosph	no	no	0.905	0.692	0.574	1e-121
Q8H6H2	538	Probable inorganic phosph	no	no	0.930	0.695	0.561	1e-120
Q7X7V2	548	Probable inorganic phosph	no	no	0.925	0.678	0.567	1e-120
Q8GSD9	528	Inorganic phosphate trans	no	no	0.902	0.687	0.558	1e-120
Q01MW8	538	Probable inorganic phosph	N/A	no	0.905	0.676	0.567	1e-119
Q8H074	541	Probable inorganic phosph	no	no	0.930	0.691	0.557	1e-116

>sp|Q8GYF4|PHT15_ARATH Probable inorganic phosphate transporter 1-5 OS=Arabidopsis thaliana GN=PHT1-5 PE=2 SV=2

 Score =  449 bits (1154), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 231/392 (58%), Positives = 277/392 (70%), Gaps = 26/392 (6%)

Query: 1   DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNH 60
           DYPLSA IMSEYANK+TRGAFIAAVFAMQG GIL  G++SLI S  F H + AP +  + 
Sbjct: 144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVSLIVSSTFDHAFKAPTYEVDP 203

Query: 61  VLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDT 120
           V S  PQ DY+WRIVLMFGA+PA LTYYWRMKMPETARYTALV  N K+AA DM+KVL  
Sbjct: 204 VGSTVPQADYVWRIVLMFGAIPALLTYYWRMKMPETARYTALVARNTKQAASDMSKVLQV 263

Query: 121 DLTVATSAYPVPVSPEAS-TYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDI 179
           DL     A     S   + T+GLF++EF ++HGLHLLGTT+TWFLLDIA+Y+ NL QKDI
Sbjct: 264 DLIAEEEAQSNSNSSNPNFTFGLFTREFARRHGLHLLGTTTTWFLLDIAYYSSNLFQKDI 323

Query: 180 YPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL 239
           Y A G +  A  M+AI EVF +SKA  L+AL  TVPGYWFTV  ID +GRF IQL GF+ 
Sbjct: 324 YTAIGWIPAAETMNAIHEVFTVSKAQTLIALCGTVPGYWFTVAFIDILGRFFIQLMGFIF 383

Query: 240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIV 299
           M+I M  L   YD  R ++              N   F+I+Y LT+FFANFGPN+TTF+V
Sbjct: 384 MTIFMFALAIPYDHWRHRE--------------NRIGFLIMYSLTMFFANFGPNATTFVV 429

Query: 300 PAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQ-----------IKQSIIT 348
           PAE+FPARLRSTCHGISAA+GKAGAIVGAFG  Y  Q  D +           ++ S++ 
Sbjct: 430 PAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYAAQSSDSEKTDAGYPPGIGVRNSLLM 489

Query: 349 LAVVNFLGFLCSFMVPETNGLSLEELSGEDKE 380
           LA VNFLG + + +VPE+ G SLEE+S ED+E
Sbjct: 490 LACVNFLGIVFTLLVPESKGKSLEEISREDEE 521

High-affinity transporter for external inorganic phosphate.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8VYM2|PHT11_ARATH Inorganic phosphate transporter 1-1 OS=Arabidopsis thaliana GN=PHT1-1 PE=1 SV=2

 Score =  449 bits (1154), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 233/388 (60%), Positives = 275/388 (70%), Gaps = 26/388 (6%)

Query: 1   DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNH 60
           DYPLSA IMSEYANK+TRGAFIAAVFAMQG+GIL  G ++L  S IF   + AP +  N 
Sbjct: 144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGVGILAGGFVALAVSSIFDKKFPAPTYAVNR 203

Query: 61  VLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDT 120
            LS  PQ DY+WRI++MFGA+PAALTYYWRMKMPETARYTALV  N K+A  DM+KVL T
Sbjct: 204 ALSTPPQVDYIWRIIVMFGALPAALTYYWRMKMPETARYTALVAKNIKQATADMSKVLQT 263

Query: 121 DLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIY 180
           D+ +          P+   YGLFSKEF+++HGLHLLGTTSTWFLLDIAFY+ NL QKDI+
Sbjct: 264 DIELEERVEDDVKDPK-QNYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIF 322

Query: 181 PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240
            A G + KAA M+A  EVFRI++A  L+AL +TVPGYWFTV  ID IGRF IQL GF +M
Sbjct: 323 SAIGWIPKAATMNATHEVFRIARAQTLIALCSTVPGYWFTVAFIDTIGRFKIQLNGFFMM 382

Query: 241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVP 300
           ++ M  +   Y+              H     N   F+++Y LT FFANFGPN+TTFIVP
Sbjct: 383 TVFMFAIAFPYN--------------HWIKPENRIGFVVMYSLTFFFANFGPNATTFIVP 428

Query: 301 AELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQ-----------IKQSIITL 349
           AE+FPARLRSTCHGISAAAGKAGAIVGAFG  Y  Q  DK            +K S+I L
Sbjct: 429 AEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSQDKAKVDAGYPPGIGVKNSLIML 488

Query: 350 AVVNFLGFLCSFMVPETNGLSLEELSGE 377
            V+NF+G L +F+VPE  G SLEELSGE
Sbjct: 489 GVLNFIGMLFTFLVPEPKGKSLEELSGE 516

High-affinity transporter for external inorganic phosphate. Acts as a H(+):phosphate symporter in both low- and high-Pi conditions. Confers sensitivity to arsenate.

Arabidopsis thaliana (taxid: 3702)

>sp|O48639|PHT13_ARATH Probable inorganic phosphate transporter 1-3 OS=Arabidopsis thaliana GN=PHT1-3 PE=2 SV=1

 Score =  448 bits (1153), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 231/388 (59%), Positives = 276/388 (71%), Gaps = 26/388 (6%)

Query: 1   DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNH 60
           DYPLSA IMSEYANK+TRGAFIAAVFAMQG+GIL  G ++L  S IF   + +P + ++ 
Sbjct: 144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGVGILAGGFVALAVSSIFDKKFPSPTYEQDR 203

Query: 61  VLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDT 120
            LS  PQ DY+WRI++MFGA+PAALTYYWRMKMPETARYTALV  N K+A  DM+KVL T
Sbjct: 204 FLSTPPQADYIWRIIVMFGALPAALTYYWRMKMPETARYTALVAKNIKQATADMSKVLQT 263

Query: 121 DLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIY 180
           DL +          P+   YGLFSKEF+++HGLHLLGTTSTWFLLDIAFY+ NL QKDI+
Sbjct: 264 DLELEERVEDDVKDPK-KNYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIF 322

Query: 181 PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240
            A G + KAA M+AI EVF+I++A  L+AL +TVPGYWFTV  ID IGRF IQL GF +M
Sbjct: 323 SAIGWIPKAATMNAIHEVFKIARAQTLIALCSTVPGYWFTVAFIDIIGRFAIQLMGFFMM 382

Query: 241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVP 300
           ++ M  +   Y+              H     N   F+++Y LT FFANFGPN+TTFIVP
Sbjct: 383 TVFMFAIAFPYN--------------HWILPDNRIGFVVMYSLTFFFANFGPNATTFIVP 428

Query: 301 AELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQ-----------IKQSIITL 349
           AE+FPARLRSTCHGISAA GKAGAIVGAFG  Y  Q  DK            +K S+I L
Sbjct: 429 AEIFPARLRSTCHGISAATGKAGAIVGAFGFLYAAQPQDKTKTDAGYPPGIGVKNSLIML 488

Query: 350 AVVNFLGFLCSFMVPETNGLSLEELSGE 377
            V+NF+G L +F+VPE  G SLEELSGE
Sbjct: 489 GVINFVGMLFTFLVPEPKGKSLEELSGE 516

High-affinity transporter for external inorganic phosphate.

Arabidopsis thaliana (taxid: 3702)

>sp|Q94DB8|PT111_ORYSJ Inorganic phosphate transporter 1-11 OS=Oryza sativa subsp. japonica GN=PHT1-11 PE=2 SV=1

 Score =  446 bits (1147), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 224/380 (58%), Positives = 277/380 (72%), Gaps = 20/380 (5%)

Query: 1   DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNH 60
           DYPLSA IMSEY+NK+TRGAFIAAVFAMQG+GI+FAG++S+I S IFL    AP++  NH
Sbjct: 150 DYPLSATIMSEYSNKKTRGAFIAAVFAMQGVGIIFAGLVSMIVSSIFLTYNKAPSYKGNH 209

Query: 61  VLSAQ-PQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLD 119
            LS Q P  DY+WRIVLM GA PA  T+YWRMKMPETARYTA+++GN K+AA DM KVL 
Sbjct: 210 DLSRQMPAADYVWRIVLMIGAFPALATFYWRMKMPETARYTAIIDGNAKQAANDMQKVLS 269

Query: 120 TDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDI 179
            ++        +     A+ Y L S EF ++HGLHL+GTT+TWFLLDIAFY+ NL QKDI
Sbjct: 270 IEIEAEQE--KLAKFNAANNYPLLSMEFARRHGLHLIGTTTTWFLLDIAFYSQNLTQKDI 327

Query: 180 YPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL 239
           +PA G++  AA ++A+ E+F+ISKA FLVAL  T PGYW TV LID++GR++IQL GF +
Sbjct: 328 FPAMGLISGAAEVNALTEMFQISKASFLVALLGTFPGYWVTVALIDKMGRYMIQLIGFFM 387

Query: 240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIV 299
           MS+ M  +G  YD                Y   +H  F +LY LT FFANFGPNSTTF++
Sbjct: 388 MSMFMLAMGILYD----------------YLKTHHFLFGLLYALTFFFANFGPNSTTFVL 431

Query: 300 PAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGD-KQIKQSIITLAVVNFLGFL 358
           PAELFP R+RSTCH ISAAAGKAGAIV AFG+Q  T     K IK+++I L++ N LGF 
Sbjct: 432 PAELFPTRVRSTCHAISAAAGKAGAIVAAFGIQKLTYNSQVKSIKKALIILSITNMLGFF 491

Query: 359 CSFMVPETNGLSLEELSGED 378
            +F+VPET G SLEE+SGED
Sbjct: 492 FTFLVPETMGRSLEEISGED 511

Symbiosis-specific regulated inorganic phosphate (Pi) transporter. Probably involved in symbiosis-mediated Pi uptake in roots colonized by myccorhizal fungi.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7XDZ7|PHT13_ORYSJ Probable inorganic phosphate transporter 1-3 OS=Oryza sativa subsp. japonica GN=PHT1-3 PE=2 SV=1

 Score =  434 bits (1115), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 223/388 (57%), Positives = 273/388 (70%), Gaps = 24/388 (6%)

Query: 1   DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNH 60
           DYPLSA IMSEYANKRTRGAFIAAVFAMQG GILF  +++L+ S  F + Y AP++    
Sbjct: 144 DYPLSATIMSEYANKRTRGAFIAAVFAMQGFGILFGAIVALVVSAGFRNAYPAPSYADGR 203

Query: 61  VLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDT 120
             S  P+ DY+WRI+LMFG VPAALTYYWRMKMPETARYTAL+  N K+AA DM+KVLDT
Sbjct: 204 AASLVPEADYVWRIILMFGTVPAALTYYWRMKMPETARYTALIARNAKQAAADMSKVLDT 263

Query: 121 DLTV-ATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDI 179
           ++   A  A  V      + +GLFS++FV++HG+HL+ TTSTWFLLDIAFY+ NL QKDI
Sbjct: 264 EIQEDADRAEAVAAGGAGNEWGLFSRQFVRRHGVHLVATTSTWFLLDIAFYSQNLFQKDI 323

Query: 180 YPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL 239
           +   G +  A  M+A+EEVFRI++A  L+AL  T+PGYWFTV  ID  GRF IQL GF +
Sbjct: 324 FSKVGWIPPARTMNAVEEVFRIARAQALIALCGTIPGYWFTVAFIDVAGRFAIQLMGFAM 383

Query: 240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIV 299
           M++ M  L A Y               H    GNH  F+++YG T FFANFGPN+TTFIV
Sbjct: 384 MTVFMLGLAAPYH--------------HWTTPGNHTGFVVMYGFTFFFANFGPNATTFIV 429

Query: 300 PAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQ---------IKQSIITLA 350
           PAE++PARLRSTCHGISAAAGKAGAIVGAFG  Y  Q   K          I+ ++  LA
Sbjct: 430 PAEIYPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQDPHKPEAGYKPGIGIRNALFVLA 489

Query: 351 VVNFLGFLCSFMVPETNGLSLEELSGED 378
             NFLG L + +VPE+ G+SLEE+S E+
Sbjct: 490 GTNFLGMLMTLLVPESKGMSLEEVSKEN 517

High-affinity transporter for external inorganic phosphate.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8H6H2|PHT14_ORYSJ Probable inorganic phosphate transporter 1-4 OS=Oryza sativa subsp. japonica GN=PHT1-4 PE=2 SV=1

 Score =  431 bits (1108), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 225/401 (56%), Positives = 270/401 (67%), Gaps = 27/401 (6%)

Query: 1   DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNH 60
           DYPLSA IMSEYANKRTRGAFIAAVFAMQG G L  G++++I S  F   ++APA+  + 
Sbjct: 143 DYPLSATIMSEYANKRTRGAFIAAVFAMQGFGNLTGGIVAIIVSAAFKSRFDAPAYRDDR 202

Query: 61  VLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDT 120
             S  PQ DY WRIVLMFGA+PA LTYYWRMKMPETARYTALV  N K+AA DM +VL+ 
Sbjct: 203 TGSTVPQADYAWRIVLMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAADMTQVLNV 262

Query: 121 DLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIY 180
           ++             E   +GLFS++F+++HG HLLGTT  WF+LDIAFY+ NL QKDIY
Sbjct: 263 EIVEEQEKADEVARRE--QFGLFSRQFLRRHGRHLLGTTVCWFVLDIAFYSSNLFQKDIY 320

Query: 181 PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240
            A   + KA  M A+EE+F+IS+A  LVAL  T+PGYWFTVF ID IGRF+IQLGGF  M
Sbjct: 321 TAVQWLPKADTMSALEEMFKISRAQTLVALCGTIPGYWFTVFFIDIIGRFVIQLGGFFFM 380

Query: 241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVP 300
           +  M  L   Y               H    GNH  F+++Y  T FFANFGPNSTTFIVP
Sbjct: 381 TAFMLGLAVPYH--------------HWTTPGNHIGFVVMYAFTFFFANFGPNSTTFIVP 426

Query: 301 AELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQ-----------IKQSIITL 349
           AE+FPARLRSTCHGISAAAGKAGAIVG+FG  Y  Q  D             ++ S+  L
Sbjct: 427 AEIFPARLRSTCHGISAAAGKAGAIVGSFGFLYAAQSTDASKTDAGYPPGIGVRNSLFFL 486

Query: 350 AVVNFLGFLCSFMVPETNGLSLEELSGEDKEIAAVTNGIAT 390
           A  N +GF  +F+VPE+ G SLEELSGE+++   V    AT
Sbjct: 487 AGCNVIGFFFTFLVPESKGKSLEELSGENEDDDDVPEAPAT 527

High-affinity transporter for external inorganic phosphate.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7X7V2|PHT15_ORYSJ Probable inorganic phosphate transporter 1-5 OS=Oryza sativa subsp. japonica GN=PHT1-5 PE=2 SV=2

 Score =  430 bits (1106), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 231/407 (56%), Positives = 274/407 (67%), Gaps = 35/407 (8%)

Query: 1   DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNH 60
           DYPLSA IMSEYANKRTRGAFIAAVFAMQG G L  G++++I S  F   ++APA+  + 
Sbjct: 143 DYPLSATIMSEYANKRTRGAFIAAVFAMQGFGNLTGGIVAIIVSAAFKLRFDAPAYRDDR 202

Query: 61  VLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDT 120
             S  PQ DY WRIVLMFGA+PA LTYYWRMKMPETARYTALV  N KKAA DMA+VL+ 
Sbjct: 203 AGSTVPQADYAWRIVLMFGAIPALLTYYWRMKMPETARYTALVAKNDKKAAADMARVLNV 262

Query: 121 DLT-------VATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTIN 173
           +L         AT+A     +     YGLFS+EF ++HG HLLGTT  WF+LDIA+Y+ N
Sbjct: 263 ELVDEQEKAAAATAAAAEEEAARREQYGLFSREFARRHGHHLLGTTVCWFVLDIAYYSQN 322

Query: 174 LAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ 233
           L QKDIY A   + KA  M A+EE+F+IS+A  LVAL  T+PGYWFTV  ID +GRF IQ
Sbjct: 323 LFQKDIYTAVQWLPKADTMSALEEMFKISRAQTLVALCGTIPGYWFTVLFIDIVGRFAIQ 382

Query: 234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPN 293
           LGGF LM+  M  L   Y               H    GNH  F+++Y  T FFANFGPN
Sbjct: 383 LGGFFLMTAFMLGLAVPYH--------------HWTTPGNHVGFVVMYAFTFFFANFGPN 428

Query: 294 STTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQ-----------I 342
           STTFIVPAE+FPARLRSTCHGIS+AAGK GAIVG+FG  Y  Q  D             +
Sbjct: 429 STTFIVPAEIFPARLRSTCHGISSAAGKMGAIVGSFGFLYAAQSTDPSKTDAGYPRGIGV 488

Query: 343 KQSIITLAVVNFLGFLCSFMVPETNGLSLEELSGEDK---EIAAVTN 386
           + S+  LA  N +GFL +F+VPE+ G SLEELSGE++   E AA TN
Sbjct: 489 RNSLFLLAGCNVVGFLFTFLVPESKGKSLEELSGENEMEAEPAAATN 535

High-affinity transporter for external inorganic phosphate.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8GSD9|PHT12_ORYSJ Inorganic phosphate transporter 1-2 OS=Oryza sativa subsp. japonica GN=PTH1-2 PE=2 SV=1

 Score =  430 bits (1106), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 216/387 (55%), Positives = 269/387 (69%), Gaps = 24/387 (6%)

Query: 1   DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNH 60
           DYPLSA IMSEYA+K+TRGAFIAAVFAMQG GILF  +++L+ S  F H Y AP++ +N 
Sbjct: 144 DYPLSATIMSEYASKKTRGAFIAAVFAMQGFGILFGAIVALVVSAGFRHAYPAPSYAQNP 203

Query: 61  VLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDT 120
             S  PQ DY WR++LMFG +PA LTYYWRMKMPETARYTALV  N K+AA DM+KVL  
Sbjct: 204 AASLAPQADYTWRLILMFGTIPAGLTYYWRMKMPETARYTALVARNAKQAAADMSKVLHA 263

Query: 121 DLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIY 180
           ++          V     T+GLFS++F+++HG+HLL TTSTWFLLDIAFY+ NL QKDI+
Sbjct: 264 EIEERPEVVESQVV-AGETWGLFSRQFMKRHGMHLLATTSTWFLLDIAFYSQNLFQKDIF 322

Query: 181 PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240
              G +  A  M+A+EE++RIS+A  L+AL  T+PGYWFTV  ID +GRF IQ+ GF +M
Sbjct: 323 SKVGWIPPAKTMNALEELYRISRAQALIALCGTIPGYWFTVAFIDIVGRFWIQIMGFFMM 382

Query: 241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVP 300
           ++ M  LG  YD              H     +H  F++LY LT FFANFGPNSTTFIVP
Sbjct: 383 TVFMLALGVPYD--------------HWTHPAHHTGFVVLYALTFFFANFGPNSTTFIVP 428

Query: 301 AELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQ---------IKQSIITLAV 351
           AE+FPARLRSTCHGISAA+GKAGAI+GAFG  Y  Q              I+ ++  LA 
Sbjct: 429 AEIFPARLRSTCHGISAASGKAGAIIGAFGFLYAAQDQHNPDAGYSRGIGIRNALFVLAG 488

Query: 352 VNFLGFLCSFMVPETNGLSLEELSGED 378
            NFLG L + +VPE+ GLSLEE+S ++
Sbjct: 489 TNFLGMLMTLLVPESKGLSLEEMSKDN 515

Low-affinity transporter for inorganic phosphate (Pi). Probably involved in internal Pi transport from root to shoot. Acts as a H(+):phosphate symporter.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q01MW8|PHT14_ORYSI Probable inorganic phosphate transporter 1-4 OS=Oryza sativa subsp. indica GN=PHT1-4 PE=2 SV=2

 Score =  430 bits (1105), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 222/391 (56%), Positives = 267/391 (68%), Gaps = 27/391 (6%)

Query: 1   DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNH 60
           DYPLSA IMSEYANKRTRGAFIAAVFAMQG G L  G++++I S  F   ++APA+  + 
Sbjct: 143 DYPLSATIMSEYANKRTRGAFIAAVFAMQGFGNLTGGIVAIIVSAAFKARFDAPAYRDDR 202

Query: 61  VLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDT 120
             S  PQ DY WRIVLMFGA+PA LTYYWRMKMPETARYTALV  N K+AA DM +VL+ 
Sbjct: 203 AGSTVPQADYAWRIVLMFGAIPALLTYYWRMKMPETARYTALVAKNAKQAAADMTQVLNV 262

Query: 121 DLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIY 180
           ++             E   +GLFS++F+++HG HLLGTT  WF+LDIAFY+ NL QKDIY
Sbjct: 263 EIVEEQEKADEVARRE--QFGLFSRQFLRRHGRHLLGTTVCWFVLDIAFYSSNLFQKDIY 320

Query: 181 PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240
            A   + KA  M A+EE+F+IS+A  LVAL  T+PGYWFTVF ID IGRF+IQLGGF  M
Sbjct: 321 TAVQWLPKADTMSALEEMFKISRAQTLVALCGTIPGYWFTVFFIDIIGRFVIQLGGFFFM 380

Query: 241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVP 300
           +  M  L   Y               H    GNH  F+++Y  T FFANFGPNSTTFIVP
Sbjct: 381 TAFMLGLAVPYH--------------HWTTPGNHIGFVVMYAFTFFFANFGPNSTTFIVP 426

Query: 301 AELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQ-----------IKQSIITL 349
           AE+FPARLRSTCHGISAAAGKAGAIVG+FG  Y  Q  D             ++ S+  L
Sbjct: 427 AEIFPARLRSTCHGISAAAGKAGAIVGSFGFLYAAQSTDASKTDAGYPPGIGVRNSLFFL 486

Query: 350 AVVNFLGFLCSFMVPETNGLSLEELSGEDKE 380
           A  N +GF  +F+VPE+ G SLEELSGE+++
Sbjct: 487 AGCNVIGFFFTFLVPESKGKSLEELSGENED 517

High-affinity transporter for external inorganic phosphate.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q8H074|PT112_ORYSJ Probable inorganic phosphate transporter 1-12 OS=Oryza sativa subsp. japonica GN=PHT1-12 PE=2 SV=1

 Score =  417 bits (1073), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 224/402 (55%), Positives = 267/402 (66%), Gaps = 28/402 (6%)

Query: 1   DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNH 60
           DYPLSA IMSEYANK+TRGAFIAAVFAMQG GIL  GV++L  S  F   + APA+  N 
Sbjct: 146 DYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGVVTLAMSAGFQAAFPAPAYEVNA 205

Query: 61  VLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDT 120
             S  PQ DY+WRI+LM GA+PA LTYYWRMKMPETARYTALV  + K+A+ DMAKVL  
Sbjct: 206 AASTVPQADYVWRIILMLGALPAILTYYWRMKMPETARYTALVAKDAKQASSDMAKVLQV 265

Query: 121 DLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIY 180
           ++ V      +        YGLFS  F ++HG HLLGT +TWFL+D+A+Y+ NL QKDI+
Sbjct: 266 EIEVEEE--KLQDITRGRDYGLFSARFAKRHGAHLLGTAATWFLVDVAYYSQNLFQKDIF 323

Query: 181 PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240
            +   + KA  M  +EEVFRIS+A  L+AL  TVPGYWFTVFLID IGRF IQL GF  M
Sbjct: 324 TSIHWIPKARTMSELEEVFRISRAQTLIALCGTVPGYWFTVFLIDIIGRFKIQLLGFAGM 383

Query: 241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVP 300
           +  M  L   Y               H    GN   F+ LYG T FFANFGPN+TTFIVP
Sbjct: 384 TAFMLGLAIPYH--------------HWTMPGNQVIFVFLYGFTFFFANFGPNATTFIVP 429

Query: 301 AELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQ-----------IKQSIITL 349
           AE+FPARLRSTCHGISAA+GKAGAI+GAFG  Y  Q  DK            ++ ++  L
Sbjct: 430 AEIFPARLRSTCHGISAASGKAGAIIGAFGFLYAAQPQDKAHVDAGYKPGIGVRNALFVL 489

Query: 350 AVVNFLGFLCSFM-VPETNGLSLEELSGEDKEIAAVTNGIAT 390
           A  N +GFL ++M VPE+ G SLEE+SGE  +  A  NG AT
Sbjct: 490 AGCNLVGFLMTWMLVPESKGKSLEEMSGEADDEEASANGGAT 531

High-affinity transporter for external inorganic phosphate.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	402
425872914	402	phosphate transporter, partial [Citrus t	1.0	1.0	0.977	0.0
225448735	535	PREDICTED: probable inorganic phosphate	0.970	0.728	0.710	1e-150
357490315	557	Inorganic phosphate transporter 1-1 [Med	1.0	0.721	0.640	1e-149
255559745	545	inorganic phosphate transporter, putativ	0.987	0.728	0.679	1e-149
407911904	559	phosphate transporter 1 [Astragalus sini	0.985	0.708	0.646	1e-148
224127872	531	high affinity inorganic phosphate transp	0.952	0.721	0.646	1e-147
297736464	542	unnamed protein product [Vitis vinifera]	0.932	0.691	0.692	1e-143
356553011	557	PREDICTED: probable inorganic phosphate	0.982	0.709	0.657	1e-139
227121310	529	phosphate transporter 10 [Glycine max]	0.982	0.746	0.657	1e-139
205277480	528	AM-induced phosphate transporter [Lotus	0.915	0.696	0.601	1e-133

>gi|425872914|gb|AFY06661.1| phosphate transporter, partial [Citrus trifoliata]

 Score =  816 bits (2107), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/402 (97%), Positives = 394/402 (98%)

Query: 1   DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNH 60
           DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNH
Sbjct: 1   DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNH 60

Query: 61  VLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDT 120
           VLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGN KKAAVDMAKVLDT
Sbjct: 61  VLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNHKKAAVDMAKVLDT 120

Query: 121 DLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIY 180
           D+ V TSAYP PVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINL QKDIY
Sbjct: 121 DINVVTSAYPAPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLTQKDIY 180

Query: 181 PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240
           PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM
Sbjct: 181 PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240

Query: 241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVP 300
           SICMAILGARYDSLRGKKCD KKDPLHEYCDGNH WFMILYGLTLFFANFGPNSTTFIVP
Sbjct: 241 SICMAILGARYDSLRGKKCDAKKDPLHEYCDGNHTWFMILYGLTLFFANFGPNSTTFIVP 300

Query: 301 AELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCS 360
           AELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCS
Sbjct: 301 AELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCS 360

Query: 361 FMVPETNGLSLEELSGEDKEIAAVTNGIATNGKHEHEDSQMV 402
           FMVPETNGLSLEELSGEDKEIA VTNGIATNGKHEHEDSQMV
Sbjct: 361 FMVPETNGLSLEELSGEDKEIAPVTNGIATNGKHEHEDSQMV 402

Source: Citrus trifoliata

Species: Citrus trifoliata

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225448735|ref|XP_002275526.1| PREDICTED: probable inorganic phosphate transporter 1-3 [Vitis vinifera] gi|147794581|emb|CAN78030.1| hypothetical protein VITISV_017530 [Vitis vinifera]

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 280/394 (71%), Positives = 326/394 (82%), Gaps = 4/394 (1%)

Query: 1   DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNH 60
           DYPLSAVIMSEYAN++TRGAFIAAVFAMQG+GIL AG +S+I S  FL  Y A  F++NH
Sbjct: 144 DYPLSAVIMSEYANQKTRGAFIAAVFAMQGIGILVAGAVSMIVSKAFLVAYKAEVFSQNH 203

Query: 61  VLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDT 120
           VLS QPQGD++WRIVLMFGAVPA LTYYWRMKMPETAR+TALV+GN +KAAVDMAKVL+ 
Sbjct: 204 VLSTQPQGDFVWRIVLMFGAVPAMLTYYWRMKMPETARFTALVKGNHEKAAVDMAKVLEQ 263

Query: 121 DLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIY 180
           D+ V  S   +PV+P  S YGL S+EFV++HGL LLGTTSTWFLLDIAFY++ L QKDIY
Sbjct: 264 DIVVEESKPKIPVTPSPS-YGLLSREFVKRHGLQLLGTTSTWFLLDIAFYSLQLTQKDIY 322

Query: 181 PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240
           PA G+V KA+ M+AIEEV++ISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM
Sbjct: 323 PAIGLVPKASTMNAIEEVYKISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 382

Query: 241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVP 300
           SI MA++G  YD LRG K    K+  +E+C+G    F +LYGLTLFFANFGPNSTTFIVP
Sbjct: 383 SIFMAVIGFLYDDLRGDKKKCPKESTNEFCEGKPYLFAVLYGLTLFFANFGPNSTTFIVP 442

Query: 301 AELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQK-GDKQIKQSIITLAVVNFLGFLC 359
           AELFPAR RSTCHGISAAAGKAGAI+GAF VQ YTQ  GD  IK++I+ L++VN +GF  
Sbjct: 443 AELFPARFRSTCHGISAAAGKAGAIIGAFLVQSYTQNVGD--IKRAIVALSMVNLIGFFL 500

Query: 360 SFMVPETNGLSLEELSGEDKEIAAVTNGIATNGK 393
           SF++PET G SLE+LSGED+       G+ T+ K
Sbjct: 501 SFLIPETKGKSLEQLSGEDQNGGDGEGGVKTDEK 534

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357490315|ref|XP_003615445.1| Inorganic phosphate transporter 1-1 [Medicago truncatula] gi|355516780|gb|AES98403.1| Inorganic phosphate transporter 1-1 [Medicago truncatula]

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 266/415 (64%), Positives = 319/415 (76%), Gaps = 13/415 (3%)

Query: 1   DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNH 60
           DYPLSAVIMSEYAN++TRG+FIAAVFAMQG+GIL AG +++  S +FL  + AP F  + 
Sbjct: 143 DYPLSAVIMSEYANQKTRGSFIAAVFAMQGVGILVAGGVAMFVSKLFLLYFPAPDFETDA 202

Query: 61  VLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDT 120
           VLS QP+GD++WRIVLMFGAVPAALTYYWRMKMPETARYTALVEG+ KKA  DMAKVLD 
Sbjct: 203 VLSTQPEGDFVWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGDHKKAVEDMAKVLDR 262

Query: 121 DLTVATSAYPVPVSP-EASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDI 179
           ++    S   + + P E+ +YGLFS EF+ +HGLHLLGTTSTWFLLDIAFY++ L QKDI
Sbjct: 263 NILSEESNTRIAIRPLESHSYGLFSSEFLNRHGLHLLGTTSTWFLLDIAFYSLQLTQKDI 322

Query: 180 YPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL 239
           YP +G+V KA+ M+AIEEVF++S+AMF VAL ATVPGYW TVFLI++IGRF IQL GFL+
Sbjct: 323 YPTSGLVYKASKMNAIEEVFQLSRAMFAVALIATVPGYWCTVFLIEKIGRFRIQLIGFLV 382

Query: 240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIV 299
           MS+CM  LG  Y S RG++   K    + +C+GN   F IL+GLTLFFANFGPNSTTFIV
Sbjct: 383 MSVCMWFLGHNYRSFRGEESACKNGSKYSFCNGNPVMFAILFGLTLFFANFGPNSTTFIV 442

Query: 300 PAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYY---TQKGDKQIKQSIITLAVVNFLG 356
           PAELFPARLRSTCHGISAAAGK+GAIVGAFGVQ Y   +    K  KQ+I+ LAVVN LG
Sbjct: 443 PAELFPARLRSTCHGISAAAGKSGAIVGAFGVQSYIGNSHDKSKGTKQAIMALAVVNLLG 502

Query: 357 FLCSFMVPETNGLSLEELSGE---------DKEIAAVTNGIATNGKHEHEDSQMV 402
           F  +F+VPET G SLEE+SGE         D+EI+   NG       +  ++ MV
Sbjct: 503 FFFTFLVPETQGRSLEEISGEEKDFQGNNADEEISGERNGTRNASVDKSPETSMV 557

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255559745|ref|XP_002520892.1| inorganic phosphate transporter, putative [Ricinus communis] gi|223540023|gb|EEF41601.1| inorganic phosphate transporter, putative [Ricinus communis]

 Score =  532 bits (1371), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 275/405 (67%), Positives = 330/405 (81%), Gaps = 8/405 (1%)

Query: 1   DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNH 60
           DYPLSAVIMSEYAN++TRGAFIAAVFAMQGMGILFAG +S I S  F++ ++AP+F+ NH
Sbjct: 146 DYPLSAVIMSEYANQKTRGAFIAAVFAMQGMGILFAGAVSTIVSKAFMNAFDAPSFSDNH 205

Query: 61  VLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDT 120
           +LS QP+ D+ WRIVLM GAVPAALT+YWRMKMPETARYTALVEGN KKAA DMA+VL+ 
Sbjct: 206 ILSTQPEADFAWRIVLMLGAVPAALTFYWRMKMPETARYTALVEGNHKKAAADMARVLEY 265

Query: 121 DLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIY 180
           D+ V  +      +P  S+YGLFS EF ++HG+HLLGTTSTWFLLDIAFY++ L QKDIY
Sbjct: 266 DIHVEETGSKAAANP-TSSYGLFSAEFFRRHGIHLLGTTSTWFLLDIAFYSLQLTQKDIY 324

Query: 181 PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240
           PA+G+V KA+ M+A+EE++ +SKAM ++AL ATVPGYWFTVFLIDRIGR++IQLGGFLLM
Sbjct: 325 PASGLVHKASTMNALEEMYHLSKAMTIIALVATVPGYWFTVFLIDRIGRYLIQLGGFLLM 384

Query: 241 SICMAILGARYDSLRGK--KCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFI 298
           SICMAILG +Y +LRG+  KC P      EYCDGN   F++L+GL LFFANFGPNSTTFI
Sbjct: 385 SICMAILGIQYGNLRGEKSKCGPTDKT--EYCDGNPILFVVLFGLALFFANFGPNSTTFI 442

Query: 299 VPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGD-KQIKQSIITLAVVNFLGF 357
           VPAELFPAR RSTCHGISAAAGKAGAI+GAF VQ YT  G+ K I+++II LA VN +GF
Sbjct: 443 VPAELFPARFRSTCHGISAAAGKAGAIIGAFVVQTYTLDGNAKNIRKAIIALAAVNLVGF 502

Query: 358 LCSFMVPETNGLSLEELSGEDKEIAAVTNGIATNGKHEHEDSQMV 402
             SF+VPET G SLEE+SGEDKEI A       NG++ H  ++ +
Sbjct: 503 FFSFLVPETKGRSLEEISGEDKEIEAGRPN--ENGRNYHGSAETI 545

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|407911904|gb|AFU50500.1| phosphate transporter 1 [Astragalus sinicus]

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 261/404 (64%), Positives = 317/404 (78%), Gaps = 8/404 (1%)

Query: 1   DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNH 60
           DYPLSAVIMSEYAN++TRG FIAAVFAMQG+GIL AG ++++ S +FL  Y AP F  + 
Sbjct: 143 DYPLSAVIMSEYANQKTRGGFIAAVFAMQGVGILVAGAVAMLVSNLFLTAYPAPDFETDP 202

Query: 61  VLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDT 120
           VLS QP+GD++WRIVLMFGAVPA LTYYWRMKMPETARYTALVEG+ KKA+ DMAKVL+ 
Sbjct: 203 VLSTQPEGDFVWRIVLMFGAVPAGLTYYWRMKMPETARYTALVEGDHKKASEDMAKVLEK 262

Query: 121 DLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIY 180
           ++ +  S   +  +    +YGLFS EF  +HGLHLLGTTSTWFLLDIAFY++ L QKDIY
Sbjct: 263 EIPLEESNIRITTAISGPSYGLFSSEFFHRHGLHLLGTTSTWFLLDIAFYSLQLTQKDIY 322

Query: 181 PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240
           PA+G+V K + M+A++EV+++SKAMF+VALFATVPGYWFTVFLID+IGRF IQL GFL+M
Sbjct: 323 PASGLVYKDSKMNAVDEVYQLSKAMFVVALFATVPGYWFTVFLIDKIGRFRIQLVGFLVM 382

Query: 241 SICMAILGARYDSLRGKK-CDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIV 299
           S+CM  LG +Y   RG   C       ++YC+GN   F+IL+GLTLFFANFGPNSTTFIV
Sbjct: 383 SLCMWFLGHKYADYRGHSGCSSGYS--YDYCNGNRPMFVILFGLTLFFANFGPNSTTFIV 440

Query: 300 PAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGD---KQIKQSIITLAVVNFLG 356
           PAELFPARLRSTCHGISAAAGK+GAI+GAF VQ YT       K  K++I+ L+VVN LG
Sbjct: 441 PAELFPARLRSTCHGISAAAGKSGAIIGAFVVQSYTDNAHDKTKGTKKAIMVLSVVNLLG 500

Query: 357 FLCSFMVPETNGLSLEELSGEDKEIAAVTNGIATNGKHEHEDSQ 400
           F  +F+VPET G SLEE+SGEDK+    T  IA N +    D++
Sbjct: 501 FFFTFLVPETQGRSLEEISGEDKDFQGDT--IANNAEETISDAK 542

Source: Astragalus sinicus

Species: Astragalus sinicus

Genus: Astragalus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127872|ref|XP_002329198.1| high affinity inorganic phosphate transporter [Populus trichocarpa] gi|222870979|gb|EEF08110.1| high affinity inorganic phosphate transporter [Populus trichocarpa]

 Score =  526 bits (1354), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 263/407 (64%), Positives = 314/407 (77%), Gaps = 24/407 (5%)

Query: 1   DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNH 60
           DYPLSAVIMSEYAN++TRGAFIAAVFAMQG+GILFAG +S I S  FL  + +  F++ +
Sbjct: 144 DYPLSAVIMSEYANQKTRGAFIAAVFAMQGVGILFAGAVSTIVSKAFLSAFPSQPFSKVN 203

Query: 61  VLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDT 120
           VLS QP+ D++WRIVLMFGAVPAALTYYWRMKMPETARYTALVEGN KKAA DMAKVL+ 
Sbjct: 204 VLSTQPEADFVWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNHKKAANDMAKVLEK 263

Query: 121 DLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIY 180
           D+T+  ++   P++P  S+YG FSKEFV KHG  LLGT STWFLLDIAFYT+NL QKD+Y
Sbjct: 264 DITIDEASSKAPINPN-SSYGFFSKEFVYKHGTQLLGTASTWFLLDIAFYTLNLTQKDVY 322

Query: 181 PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240
           PA G++ KA++M+A+EE++ +SKAM L+AL A VPGYWFTVFL+DRIGRFIIQLGGFL++
Sbjct: 323 PAAGLLNKASSMNALEEMYHLSKAMSLIALVAIVPGYWFTVFLVDRIGRFIIQLGGFLMI 382

Query: 241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVP 300
                             C P  D   ++C G+   F +LYGLT FFANFGPNSTTFIVP
Sbjct: 383 G-------------EKNACGP--DSKKDFCGGHPIMFTVLYGLTFFFANFGPNSTTFIVP 427

Query: 301 AELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQ-IKQSIITLAVVNFLGFLC 359
           AELFPAR RSTCHGISAA+GKAGAI+GAF VQYYTQ GD   IK++II L+VVN +GF  
Sbjct: 428 AELFPARFRSTCHGISAASGKAGAIIGAFVVQYYTQDGDSNGIKKAIIGLSVVNLIGFFF 487

Query: 360 SFMVPETNGLSLEELSGEDKEIAAVTNGIATNGKHEHED----SQMV 402
           +F+VPET G SLEELSGED++I         NGK+   D    S+MV
Sbjct: 488 TFLVPETKGKSLEELSGEDQDIG---KNAEANGKNYRTDVGPESEMV 531

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297736464|emb|CBI25335.3| unnamed protein product [Vitis vinifera]

 Score =  513 bits (1322), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 273/394 (69%), Positives = 317/394 (80%), Gaps = 19/394 (4%)

Query: 1   DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNH 60
           DYPLSAVIMSEYAN++TRGAFIAAVFAMQG+GIL AG +S+I S  FL  Y A  F++NH
Sbjct: 166 DYPLSAVIMSEYANQKTRGAFIAAVFAMQGIGILVAGAVSMIVSKAFLVAYKAEVFSQNH 225

Query: 61  VLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDT 120
           VLS QPQGD++WRIVLMFGAVPA LTYYWRMKMPETAR+TALV+GN +KAAVDMAKVL+ 
Sbjct: 226 VLSTQPQGDFVWRIVLMFGAVPAMLTYYWRMKMPETARFTALVKGNHEKAAVDMAKVLEQ 285

Query: 121 DLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIY 180
           D+ V  S   +PV+P  S YGL S+EFV++HGL LLGTTSTWFLLDIAFY++ L QKDIY
Sbjct: 286 DIVVEESKPKIPVTPSPS-YGLLSREFVKRHGLQLLGTTSTWFLLDIAFYSLQLTQKDIY 344

Query: 181 PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240
           PA G+V KA+ M+AIEEV++ISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM
Sbjct: 345 PAIGLVPKASTMNAIEEVYKISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 404

Query: 241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVP 300
           SI MA                 K+  +E+C+G    F +LYGLTLFFANFGPNSTTFIVP
Sbjct: 405 SIFMAC---------------PKESTNEFCEGKPYLFAVLYGLTLFFANFGPNSTTFIVP 449

Query: 301 AELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQK-GDKQIKQSIITLAVVNFLGFLC 359
           AELFPAR RSTCHGISAAAGKAGAI+GAF VQ YTQ  GD  IK++I+ L++VN +GF  
Sbjct: 450 AELFPARFRSTCHGISAAAGKAGAIIGAFLVQSYTQNVGD--IKRAIVALSMVNLIGFFL 507

Query: 360 SFMVPETNGLSLEELSGEDKEIAAVTNGIATNGK 393
           SF++PET G SLE+LSGED+       G+ T+ K
Sbjct: 508 SFLIPETKGKSLEQLSGEDQNGGDGEGGVKTDEK 541

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356553011|ref|XP_003544852.1| PREDICTED: probable inorganic phosphate transporter 1-3-like [Glycine max] gi|265144571|gb|ACY74622.1| phosphate transporter1-11 [Glycine max]

 Score =  502 bits (1293), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 265/403 (65%), Positives = 312/403 (77%), Gaps = 8/403 (1%)

Query: 1   DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNH 60
           DYPLSAVIMSEYAN++TRGAF+AAVFAMQG+GIL AG ++++ S +FL  Y A  F  + 
Sbjct: 143 DYPLSAVIMSEYANQKTRGAFVAAVFAMQGVGILVAGGVAMLVSKLFLFAYPARIFAEDA 202

Query: 61  VLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDT 120
           V S QP+ D++WRIVLMFGA PAALTYYWRMKMPETARYTALVEG+ KKA  DMAKVLD 
Sbjct: 203 VQSTQPEADFVWRIVLMFGAFPAALTYYWRMKMPETARYTALVEGDHKKAVEDMAKVLDN 262

Query: 121 DLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIY 180
           D+ +  S   V  +P  S YG FS +F++KHGLHLLGTTSTWFLLDIAFY++ L QKD Y
Sbjct: 263 DIPLEESNARVAATPGPS-YGFFSSKFLEKHGLHLLGTTSTWFLLDIAFYSLQLTQKDFY 321

Query: 181 PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240
           PA+G+V K + M+AIEEVF +SKAMF VALFATVPGYW TV+ ID+IGR+ IQL GF +M
Sbjct: 322 PASGLVPKDSRMNAIEEVFLLSKAMFTVALFATVPGYWCTVYFIDKIGRYKIQLVGFFVM 381

Query: 241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVP 300
           S+CM ILG +Y   RG  C    D   EYCDGN   F+IL+GLTLFFANFGPNSTTFIVP
Sbjct: 382 SVCMWILGRKYGEYRGVDC--SSDDRLEYCDGNLPMFIILFGLTLFFANFGPNSTTFIVP 439

Query: 301 AELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQI---KQSIITLAVVNFLGF 357
           AELFPAR RSTCHGISAAAGKAGAI+GAF VQ YT   + +I   K++++TL+VVNFLGF
Sbjct: 440 AELFPARFRSTCHGISAAAGKAGAIIGAFVVQSYTDNAEDKIKGMKKALMTLSVVNFLGF 499

Query: 358 LCSFMVPETNGLSLEELSGEDKEIAAVTNGIATNGKHEHEDSQ 400
            C+F+VPET G SLEE+SGEDKE+    N    N      D Q
Sbjct: 500 FCTFLVPETRGRSLEEISGEDKELPG--NITQDNANETTTDKQ 540

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|227121310|gb|ACP19345.1| phosphate transporter 10 [Glycine max]

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 265/403 (65%), Positives = 312/403 (77%), Gaps = 8/403 (1%)

Query: 1   DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNH 60
           DYPLSAVIMSEYAN++TRGAF+AAVFAMQG+GIL AG ++++ S +FL  Y A  F  + 
Sbjct: 115 DYPLSAVIMSEYANQKTRGAFVAAVFAMQGVGILVAGGVAMLVSKLFLFAYPARIFAEDA 174

Query: 61  VLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDT 120
           V S QP+ D++WRIVLMFGA PAALTYYWRMKMPETARYTALVEG+ KKA  DMAKVLD 
Sbjct: 175 VQSTQPEADFVWRIVLMFGAFPAALTYYWRMKMPETARYTALVEGDHKKAVEDMAKVLDN 234

Query: 121 DLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIY 180
           D+ +  S   V  +P  S YG FS +F++KHGLHLLGTTSTWFLLDIAFY++ L QKD Y
Sbjct: 235 DIPLEESNARVAATPGPS-YGFFSSKFLEKHGLHLLGTTSTWFLLDIAFYSLQLTQKDFY 293

Query: 181 PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240
           PA+G+V K + M+AIEEVF +SKAMF VALFATVPGYW TV+ ID+IGR+ IQL GF +M
Sbjct: 294 PASGLVPKDSRMNAIEEVFLLSKAMFTVALFATVPGYWCTVYFIDKIGRYKIQLVGFFVM 353

Query: 241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVP 300
           S+CM ILG +Y   RG  C    D   EYCDGN   F+IL+GLTLFFANFGPNSTTFIVP
Sbjct: 354 SVCMWILGRKYGEYRGVDC--SSDDRLEYCDGNLPMFIILFGLTLFFANFGPNSTTFIVP 411

Query: 301 AELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQI---KQSIITLAVVNFLGF 357
           AELFPAR RSTCHGISAAAGKAGAI+GAF VQ YT   + +I   K++++TL+VVNFLGF
Sbjct: 412 AELFPARFRSTCHGISAAAGKAGAIIGAFVVQSYTDNAEDKIKGMKKALMTLSVVNFLGF 471

Query: 358 LCSFMVPETNGLSLEELSGEDKEIAAVTNGIATNGKHEHEDSQ 400
            C+F+VPET G SLEE+SGEDKE+    N    N      D Q
Sbjct: 472 FCTFLVPETRGRSLEEISGEDKELPG--NITQDNANETTTDKQ 512

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|205277480|dbj|BAG71408.1| AM-induced phosphate transporter [Lotus japonicus]

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 232/386 (60%), Positives = 293/386 (75%), Gaps = 18/386 (4%)

Query: 1   DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNH 60
           DYPLSA IMSEYANKRTRGAFIAAVFAMQG+GI+FAG++S+  S  F   Y+AP+F+ + 
Sbjct: 141 DYPLSATIMSEYANKRTRGAFIAAVFAMQGVGIIFAGLVSMCLSAGFKASYHAPSFHDDP 200

Query: 61  VLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDT 120
           ++S QPQGD +WR+VLM GAVPAA+TYYWRMKMPET RYTA++EGN K+AA DMA+VLD 
Sbjct: 201 IMSTQPQGDLMWRLVLMIGAVPAAMTYYWRMKMPETGRYTAIIEGNAKQAAADMARVLDI 260

Query: 121 DLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIY 180
           ++        +     A+ Y L+S EF  +HG HL+GT ++WFLLDIAFY+ NL QKDI+
Sbjct: 261 EIQAEQDK--LAEFKAANDYPLWSNEFFTRHGRHLIGTMTSWFLLDIAFYSQNLTQKDIF 318

Query: 181 PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240
           PA G++ K   M+AI+EVF  S+AMF++ALF T PGYWFTVF I+++GR+ IQL GF +M
Sbjct: 319 PAMGLIDKDFEMNAIQEVFETSRAMFVIALFGTFPGYWFTVFFIEKLGRYKIQLIGFFMM 378

Query: 241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVP 300
           S+ M I+G +YD LR +               N   F +LYGLT FFANFGPNSTTF++P
Sbjct: 379 SVFMFIIGVKYDYLRNE---------------NSHMFALLYGLTFFFANFGPNSTTFVLP 423

Query: 301 AELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGD-KQIKQSIITLAVVNFLGFLC 359
           AELFP R+RSTCH +SAAAGKAGA+VGAFG+Q YTQKG+ KQIK +++ LAV N +GF C
Sbjct: 424 AELFPTRVRSTCHALSAAAGKAGAMVGAFGIQNYTQKGEQKQIKHAMMILAVTNLIGFFC 483

Query: 360 SFMVPETNGLSLEELSGEDKEIAAVT 385
           SF+V ET G SLEE+SGED   + +T
Sbjct: 484 SFLVTETKGRSLEEISGEDGRESELT 509

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	402
TAIR|locus:2046432	542	PHT1;5 "phosphate transporter	0.910	0.675	0.548	2e-104
TAIR|locus:2176471	521	PHT1;3 "phosphate transporter	0.900	0.694	0.554	2.5e-104
TAIR|locus:2176481	524	PHT1;2 "phosphate transporter	0.900	0.690	0.556	6.7e-104
TAIR|locus:2176461	524	PHT1;1 "AT5G43350" [Arabidopsi	0.900	0.690	0.556	6.7e-104
TAIR|locus:2064895	534	PHT1;4 "phosphate transporter	0.907	0.683	0.515	1.8e-96
TAIR|locus:2176451	516	PHT1;6 "phosphate transporter	0.741	0.577	0.549	2.1e-84
TAIR|locus:2102450	535	PHT1;7 "AT3G54700" [Arabidopsi	0.616	0.463	0.579	1.2e-72
TAIR|locus:2011681	532	PHT1;9 "AT1G76430" [Arabidopsi	0.920	0.695	0.413	2e-72
TAIR|locus:2037390	534	PHT1;8 "phosphate transporter	0.883	0.664	0.417	5.6e-68
SGD|S000004592	587	PHO84 "High-affinity inorganic	0.880	0.603	0.293	6.1e-39

TAIR|locus:2046432 PHT1;5 "phosphate transporter 1;5" [Arabidopsis thaliana (taxid:3702)]

 Score = 1034 (369.0 bits), Expect = 2.0e-104, P = 2.0e-104
 Identities = 215/392 (54%), Positives = 260/392 (66%)

Query:     1 DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNH 60
             DYPLSA IMSEYANK+TRGAFIAAVFAMQG GIL  G++SLI S  F H + AP +  + 
Sbjct:   144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVSLIVSSTFDHAFKAPTYEVDP 203

Query:    61 VLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDT 120
             V S  PQ DY+WRIVLMFGA+PA LTYYWRMKMPETARYTALV  N K+AA DM+KVL  
Sbjct:   204 VGSTVPQADYVWRIVLMFGAIPALLTYYWRMKMPETARYTALVARNTKQAASDMSKVLQV 263

Query:   121 DLTVATSAYPVPVSPEAS-TYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDI 179
             DL     A     S   + T+GLF++EF ++HGLHLLGTT+TWFLLDIA+Y+ NL QKDI
Sbjct:   264 DLIAEEEAQSNSNSSNPNFTFGLFTREFARRHGLHLLGTTTTWFLLDIAYYSSNLFQKDI 323

Query:   180 YPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL 239
             Y A G +  A  M+AI EVF +SKA  L+AL  TVPGYWFTV  ID +GRF IQL GF+ 
Sbjct:   324 YTAIGWIPAAETMNAIHEVFTVSKAQTLIALCGTVPGYWFTVAFIDILGRFFIQLMGFIF 383

Query:   240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIV 299
             M+I M  L   YD  R ++              N   F+I+Y LT+FFANFGPN+TTF+V
Sbjct:   384 MTIFMFALAIPYDHWRHRE--------------NRIGFLIMYSLTMFFANFGPNATTFVV 429

Query:   300 PAELFPARLRSTCHXXXXXXXXXXXXXXXXXXQYYTQKGDKQ-----------IKQSIIT 348
             PAE+FPARLRSTCH                   Y  Q  D +           ++ S++ 
Sbjct:   430 PAEIFPARLRSTCHGISAASGKAGAIVGAFGFLYAAQSSDSEKTDAGYPPGIGVRNSLLM 489

Query:   349 LAVVNFLGFLCSFMVPETNGLSLEELSGEDKE 380
             LA VNFLG + + +VPE+ G SLEE+S ED+E
Sbjct:   490 LACVNFLGIVFTLLVPESKGKSLEEISREDEE 521

GO:0005315 "inorganic phosphate transmembrane transporter activity" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0006817 "phosphate ion transport" evidence=IEA;IMP

GO:0015114 "phosphate ion transmembrane transporter activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0022857 "transmembrane transporter activity" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

TAIR|locus:2176471 PHT1;3 "phosphate transporter 1;3" [Arabidopsis thaliana (taxid:3702)]

 Score = 1033 (368.7 bits), Expect = 2.5e-104, P = 2.5e-104
 Identities = 215/388 (55%), Positives = 261/388 (67%)

Query:     1 DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNH 60
             DYPLSA IMSEYANK+TRGAFIAAVFAMQG+GIL  G ++L  S IF   + +P + ++ 
Sbjct:   144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGVGILAGGFVALAVSSIFDKKFPSPTYEQDR 203

Query:    61 VLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDT 120
              LS  PQ DY+WRI++MFGA+PAALTYYWRMKMPETARYTALV  N K+A  DM+KVL T
Sbjct:   204 FLSTPPQADYIWRIIVMFGALPAALTYYWRMKMPETARYTALVAKNIKQATADMSKVLQT 263

Query:   121 DLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIY 180
             DL +          P+ + YGLFSKEF+++HGLHLLGTTSTWFLLDIAFY+ NL QKDI+
Sbjct:   264 DLELEERVEDDVKDPKKN-YGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIF 322

Query:   181 PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240
              A G + KAA M+AI EVF+I++A  L+AL +TVPGYWFTV  ID IGRF IQL GF +M
Sbjct:   323 SAIGWIPKAATMNAIHEVFKIARAQTLIALCSTVPGYWFTVAFIDIIGRFAIQLMGFFMM 382

Query:   241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVP 300
             ++ M  +   Y+              H     N   F+++Y LT FFANFGPN+TTFIVP
Sbjct:   383 TVFMFAIAFPYN--------------HWILPDNRIGFVVMYSLTFFFANFGPNATTFIVP 428

Query:   301 AELFPARLRSTCHXXXXXXXXXXXXXXXXXXQYYTQKGDKQ-----------IKQSIITL 349
             AE+FPARLRSTCH                   Y  Q  DK            +K S+I L
Sbjct:   429 AEIFPARLRSTCHGISAATGKAGAIVGAFGFLYAAQPQDKTKTDAGYPPGIGVKNSLIML 488

Query:   350 AVVNFLGFLCSFMVPETNGLSLEELSGE 377
              V+NF+G L +F+VPE  G SLEELSGE
Sbjct:   489 GVINFVGMLFTFLVPEPKGKSLEELSGE 516

GO:0005315 "inorganic phosphate transmembrane transporter activity" evidence=IEA;ISS

GO:0005351 "sugar:hydrogen symporter activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0006817 "phosphate ion transport" evidence=IEA

GO:0015114 "phosphate ion transmembrane transporter activity" evidence=ISS

GO:0015144 "carbohydrate transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0022857 "transmembrane transporter activity" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2176481 PHT1;2 "phosphate transporter 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1029 (367.3 bits), Expect = 6.7e-104, P = 6.7e-104
 Identities = 216/388 (55%), Positives = 258/388 (66%)

Query:     1 DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNH 60
             DYPLSA IMSEYANK+TRGAFIAAVFAMQG+GIL  G ++L  S IF   + AP +  N 
Sbjct:   144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGVGILAGGFVALAVSSIFDKKFPAPTYAVNR 203

Query:    61 VLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDT 120
              LS  PQ DY+WRI++MFGA+PAALTYYWRMKMPETARYTALV  N K+A  DM+KVL T
Sbjct:   204 ALSTPPQVDYIWRIIVMFGALPAALTYYWRMKMPETARYTALVAKNIKQATADMSKVLQT 263

Query:   121 DLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIY 180
             D+ +          P  + YGLFSKEF+++HGLHLLGTTSTWFLLDIAFY+ NL QKDI+
Sbjct:   264 DIELEERVEDDVKDPRQN-YGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIF 322

Query:   181 PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240
              A G + KAA M+A  EVFRI++A  L+AL +TVPGYWFTV  ID IGRF IQL GF +M
Sbjct:   323 SAIGWIPKAATMNATHEVFRIARAQTLIALCSTVPGYWFTVAFIDTIGRFKIQLNGFFMM 382

Query:   241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVP 300
             ++ M  +   Y+              H     N   F+++Y LT FFANFGPN+TTFIVP
Sbjct:   383 TVFMFAIAFPYN--------------HWIKPENRIGFVVMYSLTFFFANFGPNATTFIVP 428

Query:   301 AELFPARLRSTCHXXXXXXXXXXXXXXXXXXQYYTQKGDKQ-----------IKQSIITL 349
             AE+FPARLRSTCH                   Y  Q  DK            +K S+I L
Sbjct:   429 AEIFPARLRSTCHGISAAAGKAGAIIGAFGFLYAAQNQDKAKVDAGYPPGIGVKNSLIVL 488

Query:   350 AVVNFLGFLCSFMVPETNGLSLEELSGE 377
              V+NF+G L +F+VPE  G SLEELSGE
Sbjct:   489 GVLNFIGMLFTFLVPEPKGKSLEELSGE 516

GO:0005315 "inorganic phosphate transmembrane transporter activity" evidence=IEA;ISS

GO:0005351 "sugar:hydrogen symporter activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0006817 "phosphate ion transport" evidence=IEA;TAS

GO:0015114 "phosphate ion transmembrane transporter activity" evidence=ISS

GO:0015144 "carbohydrate transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=ISS;IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0022857 "transmembrane transporter activity" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016036 "cellular response to phosphate starvation" evidence=IEP

TAIR|locus:2176461 PHT1;1 "AT5G43350" [Arabidopsis thaliana (taxid:3702)]

 Score = 1029 (367.3 bits), Expect = 6.7e-104, P = 6.7e-104
 Identities = 216/388 (55%), Positives = 259/388 (66%)

Query:     1 DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNH 60
             DYPLSA IMSEYANK+TRGAFIAAVFAMQG+GIL  G ++L  S IF   + AP +  N 
Sbjct:   144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGVGILAGGFVALAVSSIFDKKFPAPTYAVNR 203

Query:    61 VLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDT 120
              LS  PQ DY+WRI++MFGA+PAALTYYWRMKMPETARYTALV  N K+A  DM+KVL T
Sbjct:   204 ALSTPPQVDYIWRIIVMFGALPAALTYYWRMKMPETARYTALVAKNIKQATADMSKVLQT 263

Query:   121 DLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIY 180
             D+ +          P+ + YGLFSKEF+++HGLHLLGTTSTWFLLDIAFY+ NL QKDI+
Sbjct:   264 DIELEERVEDDVKDPKQN-YGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIF 322

Query:   181 PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240
              A G + KAA M+A  EVFRI++A  L+AL +TVPGYWFTV  ID IGRF IQL GF +M
Sbjct:   323 SAIGWIPKAATMNATHEVFRIARAQTLIALCSTVPGYWFTVAFIDTIGRFKIQLNGFFMM 382

Query:   241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVP 300
             ++ M  +   Y+              H     N   F+++Y LT FFANFGPN+TTFIVP
Sbjct:   383 TVFMFAIAFPYN--------------HWIKPENRIGFVVMYSLTFFFANFGPNATTFIVP 428

Query:   301 AELFPARLRSTCHXXXXXXXXXXXXXXXXXXQYYTQKGDKQ-----------IKQSIITL 349
             AE+FPARLRSTCH                   Y  Q  DK            +K S+I L
Sbjct:   429 AEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSQDKAKVDAGYPPGIGVKNSLIML 488

Query:   350 AVVNFLGFLCSFMVPETNGLSLEELSGE 377
              V+NF+G L +F+VPE  G SLEELSGE
Sbjct:   489 GVLNFIGMLFTFLVPEPKGKSLEELSGE 516

GO:0005351 "sugar:hydrogen symporter activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0015114 "phosphate ion transmembrane transporter activity" evidence=ISS;IMP

GO:0015144 "carbohydrate transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0016036 "cellular response to phosphate starvation" evidence=IEP

GO:1901683 "arsenate ion transmembrane transporter activity" evidence=IMP

GO:1901684 "arsenate ion transmembrane transport" evidence=IMP

GO:0005315 "inorganic phosphate transmembrane transporter activity" evidence=IDA

GO:0006817 "phosphate ion transport" evidence=IDA

TAIR|locus:2064895 PHT1;4 "phosphate transporter 1;4" [Arabidopsis thaliana (taxid:3702)]

 Score = 959 (342.6 bits), Expect = 1.8e-96, P = 1.8e-96
 Identities = 202/392 (51%), Positives = 258/392 (65%)

Query:     1 DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNH 60
             DYPLSA IMSEYANK+TRGAF++AVFAMQG GI+  G+ ++I S  F   + +PA+  + 
Sbjct:   144 DYPLSATIMSEYANKKTRGAFVSAVFAMQGFGIMAGGIFAIIISSAFEAKFPSPAYADDA 203

Query:    61 VLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDT 120
             + S  PQ D +WRI+LM GA+PAA+TYY R KMPETARYTALV  + K+AA DM+KVL  
Sbjct:   204 LGSTIPQADLVWRIILMAGAIPAAMTYYSRSKMPETARYTALVAKDAKQAASDMSKVLQV 263

Query:   121 DLTVATSAYPVPVSPEAS-TYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDI 179
             ++          +S E S  +GLFSKEF+ +HGLHLLGTTSTWFLLDIAFY+ NL QKDI
Sbjct:   264 EIEPEQQKLE-EISKEKSKAFGLFSKEFMSRHGLHLLGTTSTWFLLDIAFYSQNLFQKDI 322

Query:   180 YPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL 239
             + A G +  A +M+AI+EVF+I++A  L+AL +TVPGYWFTV  ID IGRF IQ+ GF  
Sbjct:   323 FSAIGWIPPAQSMNAIQEVFKIARAQTLIALCSTVPGYWFTVAFIDVIGRFAIQMMGFFF 382

Query:   240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIV 299
             M++ M  L   Y+    K+              N   F+I+Y LT FFANFGPN+TTF+V
Sbjct:   383 MTVFMFALAIPYNHWTHKE--------------NRIGFVIMYSLTFFFANFGPNATTFVV 428

Query:   300 PAELFPARLRSTCHXXXXXXXXXXXXXXXXXXQYYTQKGDKQ-----------IKQSIIT 348
             PAE+FPAR RSTCH                   Y  Q  DK            ++ S+I 
Sbjct:   429 PAEIFPARFRSTCHGISAASGKLGAMVGAFGFLYLAQNPDKDKTDAGYPPGIGVRNSLIV 488

Query:   349 LAVVNFLGFLCSFMVPETNGLSLEELSGEDKE 380
             L VVNFLG L +F+VPE+ G SLEE+SGE+++
Sbjct:   489 LGVVNFLGILFTFLVPESKGKSLEEMSGENED 520

GO:0005315 "inorganic phosphate transmembrane transporter activity" evidence=IEA;ISS

GO:0005351 "sugar:hydrogen symporter activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0006817 "phosphate ion transport" evidence=IEA

GO:0015114 "phosphate ion transmembrane transporter activity" evidence=ISS

GO:0015144 "carbohydrate transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=ISS;IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0022857 "transmembrane transporter activity" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006857 "oligopeptide transport" evidence=RCA

TAIR|locus:2176451 PHT1;6 "phosphate transporter 1;6" [Arabidopsis thaliana (taxid:3702)]

 Score = 845 (302.5 bits), Expect = 2.1e-84, P = 2.1e-84
 Identities = 172/313 (54%), Positives = 219/313 (69%)

Query:     1 DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNH 60
             DYPLSA IMSEY+NKRTRGAFIAAVF MQG+GIL AG +SL+ S +F   + + A+  + 
Sbjct:   145 DYPLSATIMSEYSNKRTRGAFIAAVFGMQGIGILAAGAVSLLVSAVFESKFPSRAYILDG 204

Query:    61 VLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDT 120
               S  PQ DY+WRI+LM GA+PA LTYYWRMKMPETARYTALV  N ++AA+DM KVL+ 
Sbjct:   205 AASTVPQADYVWRIILMVGALPALLTYYWRMKMPETARYTALVSKNAEQAALDMTKVLNV 264

Query:   121 DLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIY 180
             D+  A++A        +  +GLFS +F+++HGLHLLGT STWFLLDIAFY+ NL QKDI+
Sbjct:   265 DIE-ASAAKNDQARVSSDEFGLFSMKFLRRHGLHLLGTASTWFLLDIAFYSQNLFQKDIF 323

Query:   181 PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240
                G +  A  M+AI+E++ I+KA  ++A  +TVPGY+FTV  ID +GR  IQ+ GF +M
Sbjct:   324 TTIGWLPSAKTMNAIQELYMIAKAQTIIACCSTVPGYFFTVGFIDYMGRKKIQIMGFAMM 383

Query:   241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVP 300
             +I M  L   Y               H     N   F++LY  T FF+NFGPN+TTFIVP
Sbjct:   384 TIFMLSLAIPYH--------------HWTLPANRIGFVVLYSFTFFFSNFGPNATTFIVP 429

Query:   301 AELFPARLRSTCH 313
             AE+FPAR+RSTCH
Sbjct:   430 AEIFPARIRSTCH 442

GO:0005215 "transporter activity" evidence=IEA

GO:0005315 "inorganic phosphate transmembrane transporter activity" evidence=IEA;ISS

GO:0005351 "sugar:hydrogen symporter activity" evidence=ISS

GO:0006810 "transport" evidence=IEA

GO:0006817 "phosphate ion transport" evidence=IEA

GO:0015114 "phosphate ion transmembrane transporter activity" evidence=ISS

GO:0015144 "carbohydrate transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0022857 "transmembrane transporter activity" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

TAIR|locus:2102450 PHT1;7 "AT3G54700" [Arabidopsis thaliana (taxid:3702)]

 Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
 Identities = 146/252 (57%), Positives = 184/252 (73%)

Query:     1 DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNH 60
             DYPLSA IMSEYANK+TRGAFIAAVFAMQG GIL  G+ ++I S  F   + AP +  + 
Sbjct:   144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILTGGIFAIIVSAAFEAKFPAPTYQIDA 203

Query:    61 VLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDT 120
             + S  PQ DY+WRI+LM GA+PAA+TYY R KMPETARYTALV  + K AA +M+KVL  
Sbjct:   204 LASTVPQADYVWRIILMVGALPAAMTYYSRSKMPETARYTALVAKDAKLAASNMSKVLQV 263

Query:   121 DLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIY 180
             ++             +++++GLFSKEF+++HGLHLLGTTSTWFLLDIAFY+ NL QKDI+
Sbjct:   264 EIEAEQQG----TEDKSNSFGLFSKEFMKRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIF 319

Query:   181 PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM 240
              A G +  A  M+AI+EVF+I++A  L+AL +TVPGYWFTV  ID IGRF IQ+ GF  M
Sbjct:   320 SAIGWIPPAQTMNAIQEVFKIARAQTLIALCSTVPGYWFTVAFIDVIGRFAIQMMGFFFM 379

Query:   241 SICMAILGARYD 252
             ++ M  L   YD
Sbjct:   380 TVFMFALAIPYD 391

GO:0005351 "sugar:hydrogen symporter activity" evidence=ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0015114 "phosphate ion transmembrane transporter activity" evidence=ISS

GO:0015144 "carbohydrate transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:1901683 "arsenate ion transmembrane transporter activity" evidence=IMP

GO:1901684 "arsenate ion transmembrane transport" evidence=IMP

TAIR|locus:2011681 PHT1;9 "AT1G76430" [Arabidopsis thaliana (taxid:3702)]

 Score = 732 (262.7 bits), Expect = 2.0e-72, P = 2.0e-72
 Identities = 166/401 (41%), Positives = 232/401 (57%)

Query:     1 DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNH 60
             DYPLSA IMSE+ANKRTRGAFIAAVF+MQG+GIL +  ++++    F +     +   N 
Sbjct:   137 DYPLSATIMSEFANKRTRGAFIAAVFSMQGLGILMSSAVTMVVCLAFKNAGEGSSEKTNV 196

Query:    61 V-LS--AQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKV 117
               L   A P+ D  WR++LM GA+PAALT+YWRM MPETARYTALVE N  +AA DM +V
Sbjct:   197 AGLETLAPPESDIAWRLILMIGALPAALTFYWRMLMPETARYTALVENNVVQAAKDMQRV 256

Query:   118 LDTDLT---VATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINL 174
             +   +       S+  +   P +S+Y LFS+ F+  HG  L   ++ WFL+D+ FYT NL
Sbjct:   257 MSVSMISQITEDSSSELEQPPSSSSYKLFSRRFLSLHGRDLFAASANWFLVDVVFYTSNL 316

Query:   175 AQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQL 234
                 I+  +   +   + +  +  F ++K   +VA  +T+PGYWFTV+ ID+IGR  IQ+
Sbjct:   317 LLSQIFNFSN--KPLNSTNVYDSAFEVAKLAAIVAACSTIPGYWFTVYFIDKIGRVKIQM 374

Query:   235 GGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNS 294
              GF LM++   + G  Y     K         HE  +     FM+LYGL  FF+NFGPN+
Sbjct:   375 MGFFLMAVVYLVAGIPYSWYWSK---------HEKTNKG---FMVLYGLIFFFSNFGPNT 422

Query:   295 TTFIVPAELFPARLRSTCHXXXXXXXXXXXXXXXX----XXQYYTQKG--D-KQIKQSII 347
             TTFI+PAELFPAR RSTCH                      +++ + G  D K+++ + +
Sbjct:   423 TTFIIPAELFPARFRSTCHGISGAAGKFGAIVGTVGFLWATRHHEEDGFPDVKRVRIAFL 482

Query:   348 TLAVVNFLGFLCSFMVP-ETNGLSLEELSGEDKEIAAVTNG 387
              L  V   G + +++   ET G SLEE   ED EI + + G
Sbjct:   483 ILGGVCIAGMIVTYLFTRETMGRSLEE--NED-EIVSTSAG 520

GO:0005351 "sugar:hydrogen symporter activity" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0015114 "phosphate ion transmembrane transporter activity" evidence=IGI;ISS

GO:0015144 "carbohydrate transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0006817 "phosphate ion transport" evidence=IMP

GO:0015415 "phosphate ion transmembrane-transporting ATPase activity" evidence=IDA

GO:1901684 "arsenate ion transmembrane transport" evidence=IMP

TAIR|locus:2037390 PHT1;8 "phosphate transporter 1;8" [Arabidopsis thaliana (taxid:3702)]

 Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
 Identities = 161/386 (41%), Positives = 215/386 (55%)

Query:     1 DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNH 60
             DYPLSA IMSE+ANKRTRGAFIAAVF+MQG+GIL +  +++     F         +   
Sbjct:   136 DYPLSATIMSEFANKRTRGAFIAAVFSMQGLGILVSSAVTMAVCVAFKRSGGGLEVDA-- 193

Query:    61 VLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLD- 119
               +A  + D  WR++LM GA+PAALT+YWRM MPETARYTALVE N  +AA DM +V+  
Sbjct:   194 --AAPTEADLAWRLILMIGALPAALTFYWRMLMPETARYTALVENNIVQAAKDMQRVMSR 251

Query:   120 TDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDI 179
             + ++   +  P P  P  S Y LFS+ F + HG  L   +  WFL+DI FYT NL    I
Sbjct:   252 SHISDEATTDPPPPPPPPS-YKLFSRCFFRLHGRDLFAASFNWFLVDIVFYTSNLLLSHI 310

Query:   180 YPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL 239
             +      + + A +  +  F +++   ++A  +T+PGYWFTV+ ID+IGR  IQ+ GF  
Sbjct:   311 FSHYS-KKPSTAENVYDAAFEVAELGAIIAACSTIPGYWFTVYFIDKIGRVKIQIMGFFF 369

Query:   240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIV 299
             M++   + G  Y     K         HE+   N+  FM+LYGL  FF NFGPN+TTFI+
Sbjct:   370 MAVIYLVAGIPYSWYWSK---------HEH---NNKGFMVLYGLVFFFCNFGPNTTTFII 417

Query:   300 PAELFPARLRSTCHXXXXXXXXXXXXXXXXXXQYYTQKGDKQIKQSI---ITLAVVNFL- 355
             PAE FPAR RSTCH                   + T+K +   K  I   +    + FL 
Sbjct:   418 PAEHFPARFRSTCHGISGAAGKLGAIVGTVGFLWATKKMESDDKNQIYPEVNRMRIAFLI 477

Query:   356 -GFLCS-------FMVPETNGLSLEE 373
              G +C        F   ET G SLEE
Sbjct:   478 LGGVCIAGILVTYFFTKETMGRSLEE 503

GO:0005215 "transporter activity" evidence=IEA

GO:0005351 "sugar:hydrogen symporter activity" evidence=ISS

GO:0006810 "transport" evidence=IEA

GO:0015114 "phosphate ion transmembrane transporter activity" evidence=ISS

GO:0015144 "carbohydrate transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0022857 "transmembrane transporter activity" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

SGD|S000004592 PHO84 "High-affinity inorganic phosphate (Pi) transporter and low-affinity m" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
 Identities = 117/398 (29%), Positives = 183/398 (45%)

Query:     1 DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNH 60
             DYPLS++I SE+A  + RGA + AVFA Q  G +  G+I+LI    +             
Sbjct:   178 DYPLSSIITSEFATTKWRGAIMGAVFANQAWGQISGGIIALILVAAYKGELEYANSGAEC 237

Query:    61 VLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMA----- 115
                 Q   D +WRI++  G V      Y+R+ +PE+ RY   V    + AA         
Sbjct:   238 DARCQKACDQMWRILIGLGTVLGLACLYFRLTIPESPRYQLDVNAKLELAAAAQEQDGEK 297

Query:   116 KVLDT---DLTV------ATSAYPVPVSPEASTYGLFSKEFVQ-KHGLHLLGTTSTWFLL 165
             K+ DT   D+ +      +T+   +   P  +++  F + F Q K+G  LLGT  +WF L
Sbjct:   298 KIHDTSDEDMAINGLERASTAVESLDNHPPKASFKDFCRHFGQWKYGKILLGTAGSWFTL 357

Query:   166 DIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLID 225
             D+AFY ++L    I    G    A + +  ++++  +    ++    ++PGYW +VF +D
Sbjct:   358 DVAFYGLSLNSAVILQTIGY---AGSKNVYKKLYDTAVGNLILICAGSLPGYWVSVFTVD 414

Query:   226 RIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTL 285
              IGR  IQL GF++++    ++G  Y  L                 G+H   + LY +  
Sbjct:   415 IIGRKPIQLAGFIILTALFCVIGFAYHKL-----------------GDHG-LLALYVICQ 456

Query:   286 FFANFGPNSTTFIVPAELFPARLRSTCHXXXXXX----XXXXXXXXXXXXQYYTQKGDKQ 341
             FF NFGPN+TTFIVP E FP R RST H                       +   +  K 
Sbjct:   457 FFQNFGPNTTTFIVPGECFPTRYRSTAHGISAASGKVGAIIAQTALGTLIDHNCARDGKP 516

Query:   342 ----IKQSIITLAVVNFLGFLCSFMVPETNGLSLEELS 375
                 +   +   A+   LG   + ++PET   +LEE++
Sbjct:   517 TNCWLPHVMEIFALFMLLGIFTTLLIPETKRKTLEEIN 554

GO:0005215 "transporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=ISM;IEA

GO:0022857 "transmembrane transporter activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006797 "polyphosphate metabolic process" evidence=IMP

GO:0005315 "inorganic phosphate transmembrane transporter activity" evidence=IEA;ISS;IDA;IMP

GO:0006817 "phosphate ion transport" evidence=IEA;ISS;IDA;IMP

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=ISS;IDA

GO:0005384 "manganese ion transmembrane transporter activity" evidence=IMP

GO:0006828 "manganese ion transport" evidence=IMP

GO:0006810 "transport" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q94DB8	PT111_ORYSJ	No assigned EC number	0.5894	0.8955	0.6486	yes	no
Q8GYF4	PHT15_ARATH	No assigned EC number	0.5892	0.9104	0.6752	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	402
TIGR00887	502	TIGR00887, 2A0109, phosphate:H+ symporter	1e-152
pfam00083	449	pfam00083, Sugar_tr, Sugar (and other) transporter	1e-20
TIGR00879	481	TIGR00879, SP, MFS transporter, sugar porter (SP)	3e-11
TIGR00883	394	TIGR00883, 2A0106, metabolite-proton symporter	4e-08
TIGR00895	398	TIGR00895, 2A0115, benzoate transport	1e-07
TIGR00898	505	TIGR00898, 2A0119, cation transport protein	6e-06
cd06174	352	cd06174, MFS, The Major Facilitator Superfamily (M	2e-05
PRK10077	479	PRK10077, xylE, D-xylose transporter XylE; Provisi	7e-04

>gnl|CDD|129965 TIGR00887, 2A0109, phosphate:H+ symporter

 Score =  439 bits (1130), Expect = e-152
 Identities = 181/389 (46%), Positives = 231/389 (59%), Gaps = 30/389 (7%)

Query: 1   DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNH 60
           DYPLSA+I SE+A K+ RGA +AAVFAMQG GIL   +++LI    F H   A A   + 
Sbjct: 132 DYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASC 191

Query: 61  VLSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDT 120
             S  P  DY+WRI++ FGAVPA L  Y+R+ +PET RYTA V  + ++AA DM+ VL  
Sbjct: 192 TGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQV 251

Query: 121 DLTV----ATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQ 176
            +         A      P+AS    F+  F  +HG HLLGT  +WFLLDIAFY +NL Q
Sbjct: 252 KIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQ 311

Query: 177 KDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGG 236
           K I  A G    AA  +A EE+++ +    ++AL  TVPGYW TVFL+D IGR  IQL G
Sbjct: 312 KVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMG 371

Query: 237 FLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTT 296
           F ++++   +LG  Y+ L                   H  F+ +Y L  FFANFGPN+TT
Sbjct: 372 FFILTVLFFVLGFAYNHL-----------------STHG-FLAIYVLAQFFANFGPNATT 413

Query: 297 FIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQ--------IKQSIIT 348
           FIVP E+FP R RST HGISAA+GKAGAI+G FG  Y  Q GD          +   +  
Sbjct: 414 FIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEI 473

Query: 349 LAVVNFLGFLCSFMVPETNGLSLEELSGE 377
            A+  FLG L + ++PET G SLEELSGE
Sbjct: 474 FALFMFLGILFTLLIPETKGKSLEELSGE 502

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083) [Transport and binding proteins, Anions]. Length = 502

>gnl|CDD|215702 pfam00083, Sugar_tr, Sugar (and other) transporter

 Score = 92.7 bits (231), Expect = 1e-20
 Identities = 76/376 (20%), Positives = 124/376 (32%), Gaps = 50/376 (13%)

Query: 2   YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHV 61
             L  + +SE A K+ RGA  +        GIL A +I L  +                 
Sbjct: 119 SVLVPMYISEIAPKKLRGALGSLYQLGITFGILVAAIIGLGLNKYS-------------- 164

Query: 62  LSAQPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTD 121
                     WRI L    VPA L     + +PE+ R+  L    ++  AV       +D
Sbjct: 165 ------NSDGWRIPLGLQFVPAILLLIGLLFLPESPRWLVLKGKLEEARAVLAKLRGVSD 218

Query: 122 LTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIA--FYTINLAQKDI 179
           +          +            E  +   +          +L I      IN      
Sbjct: 219 VDQEIQEEKDSLERSVEAEKASWLELFRGKTV--RQRLLMGVMLQIFQQLTGINAI---F 273

Query: 180 YPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL 239
           Y +  I       D++     ++  + +V    T       +FL+DR GR  + L G   
Sbjct: 274 YYSPTIFETLGLSDSLL----VTIIVGVVNFVFTFIA----IFLVDRFGRRPLLLLGAAG 325

Query: 240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIV 299
           M+IC  +LG     +   K             G     ++   L + F   G     +++
Sbjct: 326 MAICFLVLGVALLGVAKSK-------------GAGIVAIVFILLFIAFFALGWGPVPWVI 372

Query: 300 PAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLC 359
            +ELFP  +R     I+ AA      +  F     T      +   ++   ++       
Sbjct: 373 VSELFPLGVRPKAMAIATAANWLANFLIGFLFPIITGAIGGYVF--LVFAGLLVLFILFV 430

Query: 360 SFMVPETNGLSLEELS 375
            F VPET G +LEE+ 
Sbjct: 431 FFFVPETKGRTLEEID 446

Length = 449

>gnl|CDD|233165 TIGR00879, SP, MFS transporter, sugar porter (SP) family

 Score = 64.3 bits (157), Expect = 3e-11
 Identities = 43/157 (27%), Positives = 65/157 (41%), Gaps = 18/157 (11%)

Query: 221 VFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMIL 280
           +FL+DR GR  + L G   M+IC+ +LG                       GN A   IL
Sbjct: 340 IFLVDRFGRRPLLLIGAAGMAICLFVLGI---------LGASFVTGSSKSSGNVAIVFIL 390

Query: 281 YGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDK 340
             L + F   G     +++ +E+FP  LR     I+ AA      +  F V +      +
Sbjct: 391 --LFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAA----NWLANFIVGFLFPTMLE 444

Query: 341 QIKQSIITL--AVVNFLGF-LCSFMVPETNGLSLEEL 374
            I    + +    +N LG     F +PET G +LEE+
Sbjct: 445 SIGVGGVFIFFGGLNVLGLIFVYFFLPETKGRTLEEI 481

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083) [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 481

>gnl|CDD|233168 TIGR00883, 2A0106, metabolite-proton symporter

 Score = 54.2 bits (131), Expect = 4e-08
 Identities = 70/331 (21%), Positives = 116/331 (35%), Gaps = 87/331 (26%)

Query: 5   SAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSA 64
           +A+ ++EYA    RG + +       +G+L A   +L    +            +++L  
Sbjct: 117 AALYLAEYAPPGKRGFYGSFQQVGAPVGLLLA---ALTVLLL------------SYLLGD 161

Query: 65  QPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTV 124
               ++ WRI  +  AV   +  Y R  + ET  +    E ++KK               
Sbjct: 162 DALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEKHKKKRG------------- 208

Query: 125 ATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIYPATG 184
                     P A T     K F+   GL +  TT         FY I       Y  T 
Sbjct: 209 ----------PIAETLTKHRKPFLLGLGLVIATTT--------TFYLIT-----TYLPT- 244

Query: 185 IVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSIC- 243
            + +   + A   +  +  ++ L  +   + G      L DRIGR  + +   +L ++  
Sbjct: 245 YLTQTLGLSANSALLVLMLSLILFFITIPLSGA-----LSDRIGRRPVLIIFTVLAALLA 299

Query: 244 ----MAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIV 299
               MA+L +   +L                     +F++L    +     GP  +    
Sbjct: 300 VPLLMALLDSGSFTL--------------------FFFLVLGMALIGGMYTGPMGSFL-- 337

Query: 300 PAELFPARLRSTCHGISAAAGKAGAIVGAFG 330
             ELFP  +R T  G S A   AGAI G F 
Sbjct: 338 -PELFPTEVRYT--GASLAYNLAGAIFGGFA 365

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc [Transport and binding proteins, Unknown substrate]. Length = 394

>gnl|CDD|233175 TIGR00895, 2A0115, benzoate transport

 Score = 53.1 bits (128), Expect = 1e-07
 Identities = 65/330 (19%), Positives = 109/330 (33%), Gaps = 64/330 (19%)

Query: 2   YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHV 61
            P    ++SEYA KR RG  +  +F    +G    G ++             P F     
Sbjct: 123 MPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWL---------IPVFG---- 169

Query: 62  LSAQPQGDYLWRIVLMFGAV-PAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDT 120
                     WR +   G + P  L       +PE+  +  LV    +     +  +   
Sbjct: 170 ----------WRSLFYVGGIAPLLLLLLLMRFLPESIDF--LVSKRPETVRRIVNAIAPQ 217

Query: 121 DLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIY 180
               A SA P   + + +   +F   F  K     +     +F+L +  Y +      + 
Sbjct: 218 MQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLM 277

Query: 181 PATGIVRKAAAMDAIEEVFRISKAMFLVALFAT--VPGYWFTVFLIDRIGRFIIQLGGFL 238
              G              F +S A    ALF    V G     +L DR+G  +      L
Sbjct: 278 VELG--------------FSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVT-ALLLL 322

Query: 239 LMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFI 298
           L ++   ++G+   S                        ++L G    F   G  S  + 
Sbjct: 323 LGAVFAVLVGSTLFSPTL---------------------LLLLGAIAGFFVNGGQSGLYA 361

Query: 299 VPAELFPARLRSTCHGISAAAGKAGAIVGA 328
           + A  +P  +R+T  G +   G+ GAI+G 
Sbjct: 362 LMALFYPTAIRATGVGWAIGIGRLGAIIGP 391

[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 398

>gnl|CDD|233176 TIGR00898, 2A0119, cation transport protein

 Score = 48.1 bits (115), Expect = 6e-06
 Identities = 53/305 (17%), Positives = 104/305 (34%), Gaps = 45/305 (14%)

Query: 72  WRIVLMFGAVP--AALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAY 129
           WR + +  ++P        W +  PE+ R+  + +G  ++A   + ++   +     +  
Sbjct: 242 WRWLQLAVSLPTFLFFLLSWFV--PESPRWL-ISQGRIEEALKILQRIAKINGKKLPAEV 298

Query: 130 PVPVSPEASTYGLFSKEFVQKHG-LHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRK 188
                 +  +         +++  L L     T  L       + L        T     
Sbjct: 299 LSLSLEKDLS------SSKKQYSFLDLF---RTPNLRKTTLCLMMLWF-----TTAFSYY 344

Query: 189 AAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILG 248
              +D       I   +F+  L   +P    T+ LIDR+GR        LL  + + +L 
Sbjct: 345 GLVLDLGNLGGNIYLDLFISGL-VELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLL 403

Query: 249 ARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARL 308
                L                   +     L  L  F          ++  AEL+P  +
Sbjct: 404 FVPVDL-------------------YFLRTALAVLGKFGIT-SAFQMVYLYTAELYPTVV 443

Query: 309 RSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETNG 368
           R+   G+ +   + G+I+  F V      G+K +   ++    +  L  + +  +PET G
Sbjct: 444 RNLGVGVCSTMARVGSIISPFLVYL----GEKWLFLPLVLFGGLALLAGILTLFLPETKG 499

Query: 369 LSLEE 373
           + L E
Sbjct: 500 VPLPE 504

[Transport and binding proteins, Cations and iron carrying compounds]. Length = 505

>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

 Score = 45.8 bits (109), Expect = 2e-05
 Identities = 29/161 (18%), Positives = 50/161 (31%), Gaps = 25/161 (15%)

Query: 205 MFLVALFATVPGYWFTVFLIDRIGR-FIIQLGGFLLMSICMAILGARYDSLRGKKCDPKK 263
           +  +     + G      L DR+GR  ++ L G LL ++ + +L                
Sbjct: 216 LLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLAL-------------- 261

Query: 264 DPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAG 323
                         +++  L L F           + +EL P   R T  G+    G  G
Sbjct: 262 --------APSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLG 313

Query: 324 AIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVP 364
             +G          G        + LA +  L  L   ++P
Sbjct: 314 GALGPLLAGLLLDTGGYGG--VFLILAALALLAALLLLLLP 352

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated. Length = 352

>gnl|CDD|182225 PRK10077, xylE, D-xylose transporter XylE; Provisional

 Score = 41.2 bits (97), Expect = 7e-04
 Identities = 70/324 (21%), Positives = 122/324 (37%), Gaps = 65/324 (20%)

Query: 72  WRIVLMFGAVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLT-------V 124
           WR +    A+PA L       +PET RY     G Q++A   + K++   L         
Sbjct: 193 WRYMFASEAIPALLFLMLLYFVPETPRYLMSR-GKQEQAEGILRKIMGNTLATQALQEIK 251

Query: 125 ATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDI--AFYTINLAQKDIYPA 182
            +  +      +   +G+         G+ ++G      +L +   F  IN+    +Y A
Sbjct: 252 HSLDHGRKTGGKLLMFGV---------GVIVIG-----VMLSVFQQFVGINVV---LYYA 294

Query: 183 TGIVRKA-AAMDA--IEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL 239
             I +   A+ D   ++ +      + ++ L  TV      +  +D+ GR  +Q+ G L 
Sbjct: 295 PEIFKTLGASTDIALLQTII-----VGVINLTFTV----LAIMTVDKFGRKPLQIIGALG 345

Query: 240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFA-NFGPNSTTFI 298
           M+I M  LG      +                      M+ Y     FA ++GP    ++
Sbjct: 346 MAIGMFSLGTA-FYTQAPGIVA-------------LLSMLFY--VAAFAMSWGP--VCWV 387

Query: 299 VPAELFPARLRSTCHGISAAAG-KAGAIVG-AFGVQYYTQKGDKQIKQSIITLAVVNFLG 356
           + +E+FP  +R     I+ AA   A   V   F +                +  +   +G
Sbjct: 388 LLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNG-FSYWIYGCMG 446

Query: 357 FLCS-FM---VPETNGLSLEELSG 376
            L + FM   VPET G +LEE+  
Sbjct: 447 VLAALFMWKFVPETKGKTLEEMEA 470

Length = 479

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	402
TIGR00887	502	2A0109 phosphate:H+ symporter. This model represen	100.0
KOG0569	485	consensus Permease of the major facilitator superf	100.0
KOG0252	538	consensus Inorganic phosphate transporter [Inorgan	100.0
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	99.97
PRK10642	490	proline/glycine betaine transporter; Provisional	99.96
KOG0253	528	consensus Synaptic vesicle transporter SV2 (major	99.96
PRK10077	479	xylE D-xylose transporter XylE; Provisional	99.96
KOG0254	513	consensus Predicted transporter (major facilitator	99.95
PF00083	451	Sugar_tr: Sugar (and other) transporter; InterPro:	99.95
TIGR00898	505	2A0119 cation transport protein.	99.94
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	99.94
PRK09952	438	shikimate transporter; Provisional	99.93
PRK10406	432	alpha-ketoglutarate transporter; Provisional	99.91
COG2271	448	UhpC Sugar phosphate permease [Carbohydrate transp	99.91
TIGR00903	368	2A0129 major facilitator 4 family protein. This fa	99.91
PRK11551	406	putative 3-hydroxyphenylpropionic transporter MhpT	99.9
PRK11663	434	regulatory protein UhpC; Provisional	99.9
PRK12307	426	putative sialic acid transporter; Provisional	99.9
TIGR02332	412	HpaX 4-hydroxyphenylacetate permease. This protein	99.89
PRK15075	434	citrate-proton symporter; Provisional	99.89
PRK10489	417	enterobactin exporter EntS; Provisional	99.88
TIGR00891	405	2A0112 putative sialic acid transporter.	99.88
PRK11273	452	glpT sn-glycerol-3-phosphate transporter; Provisio	99.88
PRK09556	467	uhpT sugar phosphate antiporter; Reviewed	99.87
TIGR00895	398	2A0115 benzoate transport.	99.87
PRK03893	496	putative sialic acid transporter; Provisional	99.87
TIGR00883	394	2A0106 metabolite-proton symporter. This model rep	99.87
TIGR00893	399	2A0114 d-galactonate transporter.	99.87
TIGR00894	465	2A0114euk Na(+)-dependent inorganic phosphate cotr	99.87
PRK03545	390	putative arabinose transporter; Provisional	99.87
COG2814	394	AraJ Arabinose efflux permease [Carbohydrate trans	99.86
KOG0255	521	consensus Synaptic vesicle transporter SVOP and re	99.85
PRK11010	491	ampG muropeptide transporter; Validated	99.85
TIGR00712	438	glpT glycerol-3-phosphate transporter. This model	99.85
TIGR00890	377	2A0111 Oxalate/Formate Antiporter.	99.84
PLN00028	476	nitrate transmembrane transporter; Provisional	99.84
KOG2532	466	consensus Permease of the major facilitator superf	99.84
PRK05122	399	major facilitator superfamily transporter; Provisi	99.84
TIGR00892	455	2A0113 monocarboxylate transporter 1.	99.84
PRK15011	393	sugar efflux transporter B; Provisional	99.83
PRK09705	393	cynX putative cyanate transporter; Provisional	99.83
PRK03699	394	putative transporter; Provisional	99.83
TIGR00899	375	2A0120 sugar efflux transporter. This family of pr	99.83
COG2223	417	NarK Nitrate/nitrite transporter [Inorganic ion tr	99.82
cd06174	352	MFS The Major Facilitator Superfamily (MFS) is a l	99.82
TIGR00900	365	2A0121 H+ Antiporter protein.	99.81
PRK09874	408	drug efflux system protein MdtG; Provisional	99.81
PRK12382	392	putative transporter; Provisional	99.81
KOG2533	495	consensus Permease of the major facilitator superf	99.8
TIGR00897	402	2A0118 polyol permease family. This family of prot	99.8
PRK10504	471	putative transporter; Provisional	99.8
TIGR00881	379	2A0104 phosphoglycerate transporter family protein	99.79
PRK10091	382	MFS transport protein AraJ; Provisional	99.79
PRK10213	394	nepI ribonucleoside transporter; Reviewed	99.79
PRK11902	402	ampG muropeptide transporter; Reviewed	99.79
TIGR00901	356	2A0125 AmpG-related permease.	99.77
PRK14995	495	methyl viologen resistance protein SmvA; Provision	99.76
TIGR00710	385	efflux_Bcr_CflA drug resistance transporter, Bcr/C	99.76
TIGR00711	485	efflux_EmrB drug resistance transporter, EmrB/QacA	99.76
TIGR00902	382	2A0127 phenyl proprionate permease family protein.	99.76
PRK15034	462	nitrate/nitrite transport protein NarU; Provisiona	99.75
PRK15402	406	multidrug efflux system translocase MdfA; Provisio	99.75
PRK11102	377	bicyclomycin/multidrug efflux system; Provisional	99.74
TIGR02718	390	sider_RhtX_FptX siderophore transporter, RhtX/FptX	99.74
PRK11195	393	lysophospholipid transporter LplT; Provisional	99.74
TIGR00792	437	gph sugar (Glycoside-Pentoside-Hexuronide) transpo	99.74
PRK11043	401	putative transporter; Provisional	99.74
PRK10473	392	multidrug efflux system protein MdtL; Provisional	99.74
PF07690	352	MFS_1: Major Facilitator Superfamily; InterPro: IP	99.73
PRK09528	420	lacY galactoside permease; Reviewed	99.72
TIGR01272	310	gluP glucose/galactose transporter. Disruption of	99.72
PRK03633	381	putative MFS family transporter protein; Provision	99.72
PF11700	477	ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0	99.71
PRK11128	382	putative 3-phenylpropionic acid transporter; Provi	99.71
TIGR00889	418	2A0110 nucleoside transporter. This family of prot	99.7
PRK06814	1140	acylglycerophosphoethanolamine acyltransferase; Pr	99.7
PRK10054	395	putative transporter; Provisional	99.7
PRK11646	400	multidrug resistance protein MdtH; Provisional	99.7
PRK08633	1146	2-acyl-glycerophospho-ethanolamine acyltransferase	99.7
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	99.69
KOG2504	509	consensus Monocarboxylate transporter [Carbohydrat	99.67
TIGR00886	366	2A0108 nitrite extrusion protein (nitrite facilita	99.66
TIGR00896	355	CynX cyanate transporter. This family of proteins	99.65
PRK15403	413	multidrug efflux system protein MdtM; Provisional	99.64
TIGR00882	396	2A0105 oligosaccharide:H+ symporter.	99.63
PRK11652	394	emrD multidrug resistance protein D; Provisional	99.62
COG2807	395	CynX Cyanate permease [Inorganic ion transport and	99.61
TIGR02332	412	HpaX 4-hydroxyphenylacetate permease. This protein	99.61
TIGR00885	410	fucP L-fucose:H+ symporter permease. This family d	99.6
KOG1330	493	consensus Sugar transporter/spinster transmembrane	99.6
COG2271	448	UhpC Sugar phosphate permease [Carbohydrate transp	99.59
PRK10133	438	L-fucose transporter; Provisional	99.59
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	99.59
TIGR00895	398	2A0115 benzoate transport.	99.58
PRK10429	473	melibiose:sodium symporter; Provisional	99.57
PRK11663	434	regulatory protein UhpC; Provisional	99.56
TIGR00891	405	2A0112 putative sialic acid transporter.	99.56
COG2211	467	MelB Na+/melibiose symporter and related transport	99.56
TIGR01301	477	GPH_sucrose GPH family sucrose/H+ symporter. This	99.56
PRK10213	394	nepI ribonucleoside transporter; Reviewed	99.55
PRK03545	390	putative arabinose transporter; Provisional	99.54
PF13347	428	MFS_2: MFS/sugar transport protein	99.53
TIGR00710	385	efflux_Bcr_CflA drug resistance transporter, Bcr/C	99.53
TIGR00893	399	2A0114 d-galactonate transporter.	99.53
COG2814	394	AraJ Arabinose efflux permease [Carbohydrate trans	99.53
PRK11551	406	putative 3-hydroxyphenylpropionic transporter MhpT	99.53
PRK09669	444	putative symporter YagG; Provisional	99.53
PRK14995	495	methyl viologen resistance protein SmvA; Provision	99.51
PF06609	599	TRI12: Fungal trichothecene efflux pump (TRI12); I	99.51
PLN00028	476	nitrate transmembrane transporter; Provisional	99.5
PRK12307	426	putative sialic acid transporter; Provisional	99.5
PRK15462	493	dipeptide/tripeptide permease D; Provisional	99.5
TIGR00887	502	2A0109 phosphate:H+ symporter. This model represen	99.5
TIGR00881	379	2A0104 phosphoglycerate transporter family protein	99.5
PRK10054	395	putative transporter; Provisional	99.49
PRK03699	394	putative transporter; Provisional	99.49
TIGR00711	485	efflux_EmrB drug resistance transporter, EmrB/QacA	99.49
KOG2615	451	consensus Permease of the major facilitator superf	99.49
PRK10504	471	putative transporter; Provisional	99.49
PRK03893	496	putative sialic acid transporter; Provisional	99.49
TIGR00805	633	oat sodium-independent organic anion transporter.	99.49
PRK10207	489	dipeptide/tripeptide permease B; Provisional	99.49
TIGR00924	475	yjdL_sub1_fam amino acid/peptide transporter (Pept	99.49
PF07690	352	MFS_1: Major Facilitator Superfamily; InterPro: IP	99.48
PRK11462	460	putative transporter; Provisional	99.48
TIGR00788	468	fbt folate/biopterin transporter. The only functio	99.48
PRK10473	392	multidrug efflux system protein MdtL; Provisional	99.48
COG2270	438	Permeases of the major facilitator superfamily [Ge	99.47
PRK15402	406	multidrug efflux system translocase MdfA; Provisio	99.46
PRK11273	452	glpT sn-glycerol-3-phosphate transporter; Provisio	99.46
TIGR00900	365	2A0121 H+ Antiporter protein.	99.46
PRK10207	489	dipeptide/tripeptide permease B; Provisional	99.45
TIGR00924	475	yjdL_sub1_fam amino acid/peptide transporter (Pept	99.45
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	99.44
PRK10091	382	MFS transport protein AraJ; Provisional	99.44
TIGR00712	438	glpT glycerol-3-phosphate transporter. This model	99.43
PRK10077	479	xylE D-xylose transporter XylE; Provisional	99.43
TIGR00903	368	2A0129 major facilitator 4 family protein. This fa	99.43
PRK11652	394	emrD multidrug resistance protein D; Provisional	99.42
PRK10406	432	alpha-ketoglutarate transporter; Provisional	99.42
PRK15403	413	multidrug efflux system protein MdtM; Provisional	99.42
KOG1330	493	consensus Sugar transporter/spinster transmembrane	99.41
PRK05122	399	major facilitator superfamily transporter; Provisi	99.4
COG0738	422	FucP Fucose permease [Carbohydrate transport and m	99.4
PRK12382	392	putative transporter; Provisional	99.4
PRK11102	377	bicyclomycin/multidrug efflux system; Provisional	99.4
PRK09556	467	uhpT sugar phosphate antiporter; Reviewed	99.39
TIGR00894	465	2A0114euk Na(+)-dependent inorganic phosphate cotr	99.39
PRK09874	408	drug efflux system protein MdtG; Provisional	99.38
TIGR00886	366	2A0108 nitrite extrusion protein (nitrite facilita	99.37
TIGR00890	377	2A0111 Oxalate/Formate Antiporter.	99.36
PRK10642	490	proline/glycine betaine transporter; Provisional	99.36
PRK09584	500	tppB putative tripeptide transporter permease; Rev	99.36
PRK11646	400	multidrug resistance protein MdtH; Provisional	99.36
TIGR00892	455	2A0113 monocarboxylate transporter 1.	99.35
PRK11043	401	putative transporter; Provisional	99.35
PRK11195	393	lysophospholipid transporter LplT; Provisional	99.35
PF01306	412	LacY_symp: LacY proton/sugar symporter; InterPro:	99.35
PRK09584	500	tppB putative tripeptide transporter permease; Rev	99.34
PRK10489	417	enterobactin exporter EntS; Provisional	99.34
cd06174	352	MFS The Major Facilitator Superfamily (MFS) is a l	99.34
PF03825	400	Nuc_H_symport: Nucleoside H+ symporter	99.34
PRK09848	448	glucuronide transporter; Provisional	99.33
PRK15075	434	citrate-proton symporter; Provisional	99.33
TIGR00898	505	2A0119 cation transport protein.	99.32
PRK15034	462	nitrate/nitrite transport protein NarU; Provisiona	99.32
TIGR00885	410	fucP L-fucose:H+ symporter permease. This family d	99.32
TIGR00897	402	2A0118 polyol permease family. This family of prot	99.32
PRK09952	438	shikimate transporter; Provisional	99.31
KOG3626	735	consensus Organic anion transporter [Secondary met	99.31
KOG4686	459	consensus Predicted sugar transporter [Carbohydrat	99.31
COG2223	417	NarK Nitrate/nitrite transporter [Inorganic ion tr	99.31
PRK09705	393	cynX putative cyanate transporter; Provisional	99.29
PRK03633	381	putative MFS family transporter protein; Provision	99.28
KOG3764	464	consensus Vesicular amine transporter [Intracellul	99.27
PTZ00207	591	hypothetical protein; Provisional	99.27
KOG0569	485	consensus Permease of the major facilitator superf	99.27
PRK11010	491	ampG muropeptide transporter; Validated	99.27
TIGR00899	375	2A0120 sugar efflux transporter. This family of pr	99.26
TIGR00806	511	rfc RFC reduced folate carrier. Proteins of the RF	99.25
KOG2615	451	consensus Permease of the major facilitator superf	99.25
TIGR00880	141	2_A_01_02 Multidrug resistance protein.	99.25
PTZ00207	591	hypothetical protein; Provisional	99.24
TIGR00805	633	oat sodium-independent organic anion transporter.	99.24
PRK10133	438	L-fucose transporter; Provisional	99.23
KOG2563	480	consensus Permease of the major facilitator superf	99.23
PRK11902	402	ampG muropeptide transporter; Reviewed	99.21
KOG0255	521	consensus Synaptic vesicle transporter SVOP and re	99.2
TIGR00806	511	rfc RFC reduced folate carrier. Proteins of the RF	99.2
PRK09528	420	lacY galactoside permease; Reviewed	99.18
TIGR01301	477	GPH_sucrose GPH family sucrose/H+ symporter. This	99.14
TIGR00883	394	2A0106 metabolite-proton symporter. This model rep	99.13
TIGR00901	356	2A0125 AmpG-related permease.	99.13
KOG3764	464	consensus Vesicular amine transporter [Intracellul	99.12
PF03209	403	PUCC: PUCC protein; InterPro: IPR004896 This prote	99.11
TIGR00896	355	CynX cyanate transporter. This family of proteins	99.1
KOG2532	466	consensus Permease of the major facilitator superf	99.1
PRK15462	493	dipeptide/tripeptide permease D; Provisional	99.1
PRK08633	1146	2-acyl-glycerophospho-ethanolamine acyltransferase	99.1
PF06609	599	TRI12: Fungal trichothecene efflux pump (TRI12); I	99.1
PRK06814	1140	acylglycerophosphoethanolamine acyltransferase; Pr	99.1
PF03137	539	OATP: Organic Anion Transporter Polypeptide (OATP)	99.09
PRK15011	393	sugar efflux transporter B; Provisional	99.08
TIGR00882	396	2A0105 oligosaccharide:H+ symporter.	99.08
PRK11128	382	putative 3-phenylpropionic acid transporter; Provi	99.07
PF00083	451	Sugar_tr: Sugar (and other) transporter; InterPro:	99.05
TIGR00902	382	2A0127 phenyl proprionate permease family protein.	99.03
KOG2816	463	consensus Predicted transporter ADD1 (major facili	99.03
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	98.99
KOG0252	538	consensus Inorganic phosphate transporter [Inorgan	98.94
KOG0254	513	consensus Predicted transporter (major facilitator	98.93
PF06813	250	Nodulin-like: Nodulin-like; InterPro: IPR010658 Th	98.93
COG3104	498	PTR2 Dipeptide/tripeptide permease [Amino acid tra	98.87
KOG2504	509	consensus Monocarboxylate transporter [Carbohydrat	98.84
COG0738	422	FucP Fucose permease [Carbohydrate transport and m	98.84
TIGR02718	390	sider_RhtX_FptX siderophore transporter, RhtX/FptX	98.84
TIGR00792	437	gph sugar (Glycoside-Pentoside-Hexuronide) transpo	98.83
KOG2533	495	consensus Permease of the major facilitator superf	98.83
KOG0253	528	consensus Synaptic vesicle transporter SV2 (major	98.74
PRK09669	444	putative symporter YagG; Provisional	98.69
TIGR00788	468	fbt folate/biopterin transporter. The only functio	98.6
TIGR00889	418	2A0110 nucleoside transporter. This family of prot	98.59
KOG2325	488	consensus Predicted transporter/transmembrane prot	98.58
PF03092	433	BT1: BT1 family; InterPro: IPR004324 Members of th	98.55
PRK10429	473	melibiose:sodium symporter; Provisional	98.54
KOG2325	488	consensus Predicted transporter/transmembrane prot	98.53
PF13347	428	MFS_2: MFS/sugar transport protein	98.52
KOG3762	618	consensus Predicted transporter [General function	98.5
PF01306	412	LacY_symp: LacY proton/sugar symporter; InterPro:	98.47
COG3104	498	PTR2 Dipeptide/tripeptide permease [Amino acid tra	98.46
PF05631	354	DUF791: Protein of unknown function (DUF791); Inte	98.42
PF03825	400	Nuc_H_symport: Nucleoside H+ symporter	98.4
KOG2816	463	consensus Predicted transporter ADD1 (major facili	98.37
PRK11462	460	putative transporter; Provisional	98.34
PF01770	412	Folate_carrier: Reduced folate carrier; InterPro:	98.24
KOG2563	480	consensus Permease of the major facilitator superf	98.19
KOG3098	461	consensus Uncharacterized conserved protein [Funct	98.14
COG2211	467	MelB Na+/melibiose symporter and related transport	98.12
COG2807	395	CynX Cyanate permease [Inorganic ion transport and	98.12
PRK09848	448	glucuronide transporter; Provisional	98.09
TIGR00926	654	2A1704 Peptide:H+ symporter (also transports b-lac	98.09
PF06963	432	FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi	98.01
KOG3810	433	consensus Micronutrient transporters (folate trans	97.98
PF12832	77	MFS_1_like: MFS_1 like family	97.92
TIGR00880	141	2_A_01_02 Multidrug resistance protein.	97.79
PF03137	539	OATP: Organic Anion Transporter Polypeptide (OATP)	97.78
PF11700	477	ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0	97.71
PF03209	403	PUCC: PUCC protein; InterPro: IPR004896 This prote	97.57
PF02487	402	CLN3: CLN3 protein; InterPro: IPR003492 Batten's d	97.57
PF01770	412	Folate_carrier: Reduced folate carrier; InterPro:	97.56
PF07672	267	MFS_Mycoplasma: Mycoplasma MFS transporter; InterP	97.53
KOG3626	735	consensus Organic anion transporter [Secondary met	97.47
PF03092	433	BT1: BT1 family; InterPro: IPR004324 Members of th	97.38
TIGR00769	472	AAA ADP/ATP carrier protein family. These proteins	97.35
TIGR00769	472	AAA ADP/ATP carrier protein family. These proteins	97.34
PF05978	156	UNC-93: Ion channel regulatory protein UNC-93; Int	97.28
PF06779	85	DUF1228: Protein of unknown function (DUF1228); In	97.18
COG0477	338	ProP Permeases of the major facilitator superfamil	97.04
PF06963	432	FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi	96.78
TIGR00939	437	2a57 Equilibrative Nucleoside Transporter (ENT).	96.71
KOG0637	498	consensus Sucrose transporter and related proteins	96.66
PF13000	544	Acatn: Acetyl-coenzyme A transporter 1; InterPro:	96.65
KOG4686	459	consensus Predicted sugar transporter [Carbohydrat	96.37
TIGR01272	310	gluP glucose/galactose transporter. Disruption of	96.31
PF03219	491	TLC: TLC ATP/ADP transporter; InterPro: IPR004667	96.07
KOG0637	498	consensus Sucrose transporter and related proteins	96.06
PF01733	309	Nucleoside_tran: Nucleoside transporter; InterPro:	95.87
KOG1479	406	consensus Nucleoside transporter [Nucleotide trans	95.86
PF02487	402	CLN3: CLN3 protein; InterPro: IPR003492 Batten's d	95.69
COG2270	438	Permeases of the major facilitator superfamily [Ge	95.69
COG3202	509	ATP/ADP translocase [Energy production and convers	95.61
COG3202	509	ATP/ADP translocase [Energy production and convers	95.38
PF00854	372	PTR2: POT family; InterPro: IPR000109 This entry r	95.29
PF03219	491	TLC: TLC ATP/ADP transporter; InterPro: IPR004667	95.1
KOG1237	571	consensus H+/oligopeptide symporter [Amino acid tr	94.73
KOG3762	618	consensus Predicted transporter [General function	94.6
PF00854	372	PTR2: POT family; InterPro: IPR000109 This entry r	94.33
KOG1479	406	consensus Nucleoside transporter [Nucleotide trans	93.83
KOG3574	510	consensus Acetyl-CoA transporter [Inorganic ion tr	93.8
KOG3098	461	consensus Uncharacterized conserved protein [Funct	93.66
TIGR00926	654	2A1704 Peptide:H+ symporter (also transports b-lac	93.4
KOG3574	510	consensus Acetyl-CoA transporter [Inorganic ion tr	93.33
PRK03612	521	spermidine synthase; Provisional	93.08
PF13000	544	Acatn: Acetyl-coenzyme A transporter 1; InterPro:	92.98
PF05631	354	DUF791: Protein of unknown function (DUF791); Inte	91.83
TIGR00939	437	2a57 Equilibrative Nucleoside Transporter (ENT).	90.46
PF06813	250	Nodulin-like: Nodulin-like; InterPro: IPR010658 Th	87.56
KOG4332	454	consensus Predicted sugar transporter [Carbohydrat	87.03
KOG1237	571	consensus H+/oligopeptide symporter [Amino acid tr	84.96

>TIGR00887 2A0109 phosphate:H+ symporter

Probab=100.00  E-value=1.2e-34  Score=275.85  Aligned_cols=357  Identities=49%  Similarity=0.809  Sum_probs=229.4

Q ss_pred             CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073            2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV   81 (402)
Q Consensus         2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i   81 (402)
                      ++..++|++|++|+++||+++++.+.+..+|.++++.++..+...+....+.......+.-.......++||+++.++++
T Consensus       133 ~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~i  212 (502)
T TIGR00887       133 YPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAV  212 (502)
T ss_pred             hHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHH
Confidence            46778999999999999999999999999999999999887653222110000000000000000123589999999999


Q ss_pred             HHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCC----CccccccchhhhhhhhhHHHHH
Q 045073           82 PAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSP----EASTYGLFSKEFVQKHGLHLLG  157 (402)
Q Consensus        82 ~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~  157 (402)
                      ++++.++.++++||||||+..++++++++.+.+.+..+.+.+++.++.++.+++    +...+++++....++..+.++.
T Consensus       213 p~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  292 (502)
T TIGR00887       213 PALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLG  292 (502)
T ss_pred             HHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHH
Confidence            999888888899999999865444434455555555443322222111111110    1122233333323333344444


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHH
Q 045073          158 TTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGF  237 (402)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~  237 (402)
                      ....++...+.+|+...+.|.++++.|++....+...+............+..++.+++.+++++++||+|||+.++.+.
T Consensus       293 ~~~~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~  372 (502)
T TIGR00887       293 TAGSWFLLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGF  372 (502)
T ss_pred             HHHHHHHHHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHH
Confidence            45555666677888888899999888887543221111111111222334455667778889999999999999998888


Q ss_pred             HHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHH
Q 045073          238 LLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISA  317 (402)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~  317 (402)
                      .+++++++++.......  .              ..  ....++.....+...+..+..+.+.+|++|++.|+++.|+.+
T Consensus       373 ~~~~~~~~~l~~~~~~~--~--------------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~  434 (502)
T TIGR00887       373 FILTVLFFVLGFAYNHL--S--------------TH--GFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISA  434 (502)
T ss_pred             HHHHHHHHHHHHHHHhc--c--------------hh--HHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHH
Confidence            77777666555432100  0              11  122222222233345666778888999999999999999999


Q ss_pred             HHHHHhHHHHhHhHHhhhhccC--------CcchhhHHHHHHHHHHHhhheeeeeccCCcccccccc
Q 045073          318 AAGKAGAIVGAFGVQYYTQKGD--------KQIKQSIITLAVVNFLGFLCSFMVPETNGLSLEELSG  376 (402)
Q Consensus       318 ~~~~~g~~i~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~i~~i~~~~~~et~~~~~~~~~~  376 (402)
                      .+++++++++|.+.+.+.+..+        .++..++++++++++++.+..+++|||+++++||+++
T Consensus       435 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~lpEt~~~~leei~~  501 (502)
T TIGR00887       435 ASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLLIPETKGKSLEELSG  501 (502)
T ss_pred             HHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHheEeccCCCCCHHhhhC
Confidence            9999999999999998887421        1345678888888888777766779999998877654

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=100.00  E-value=6.9e-34  Score=258.59  Aligned_cols=326  Identities=19%  Similarity=0.239  Sum_probs=254.5

Q ss_pred             cchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHH
Q 045073            4 LSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPA   83 (402)
Q Consensus         4 ~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~   83 (402)
                      ..+.|+.|.+|++.||....+.+.+..+|.+++..++..-.                     .+....|++.+.+..+++
T Consensus       136 ~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~i---------------------lGt~~~W~~l~~~~~i~~  194 (485)
T KOG0569|consen  136 LVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSL---------------------LGTEDLWPYLLAFPLIPA  194 (485)
T ss_pred             HHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHh---------------------cCCCcchHHHHHHHHHHH
Confidence            46789999999999999999999999999999988776543                     235567999999999999


Q ss_pred             HHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhcccccccccc-----CCC---CCCCCCccccccchhhhhhhhhHHH
Q 045073           84 ALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATS-----AYP---VPVSPEASTYGLFSKEFVQKHGLHL  155 (402)
Q Consensus        84 ~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  155 (402)
                      ++.++...++||||+|+..++++++++.+.++..++.+.+++..     +.+   ..+.++.+.++.++++..|+.  ..
T Consensus       195 ~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~--~~  272 (485)
T KOG0569|consen  195 LLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRP--LL  272 (485)
T ss_pred             HHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHH--HH
Confidence            99999999999999999877788888888888887765322211     111   111234456677777666653  34


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHH
Q 045073          156 LGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLG  235 (402)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~  235 (402)
                      +.+.+....+..+.+....|...++++.|++..++..            .+....+..++.++++.+++||+|||++++.
T Consensus       273 i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~------------an~~~g~v~~~~t~~~~~lid~~gRRpLll~  340 (485)
T KOG0569|consen  273 IGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQY------------ANLGIGIVNLLSTLVSPFLIDRLGRRPLLLI  340 (485)
T ss_pred             HHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHhcCCcHHHHH
Confidence            4555555566678888999999999999999887665            6777778888888899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHH--HHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073          236 GFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAW--FMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH  313 (402)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~  313 (402)
                      +..++.++.+++..........              ..+..  .+.........+..|.+|+.|.+.+|++|++.|+.+.
T Consensus       341 ~~~~~~~~~~~~~~~~~l~~~~--------------~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~  406 (485)
T KOG0569|consen  341 SLSLMAVALLLMSIALFLSNSF--------------GSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQ  406 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHh--------------hhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHH
Confidence            9999988887777654432211              11122  2333444455667889999999999999999999999


Q ss_pred             hHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeeccCCccccccccchhhh
Q 045073          314 GISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPETNGLSLEELSGEDKEI  381 (402)
Q Consensus       314 ~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~~~~~~~~~~~~~~~  381 (402)
                      ++....+++..++..+.++.+.+..  |. ..|+++.+.+++..+..+ ++||||+|+.+|+.++.++.
T Consensus       407 s~~~~~~w~~~fiv~~~fp~l~~~~--g~-~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~~~  472 (485)
T KOG0569|consen  407 SVATAVNWLSNFIVGFAFPPLQNVI--GP-YVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELEKR  472 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh--cc-hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHHhC
Confidence            9999999999999999999999877  33 788888888888877776 45999999998887765443

>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]

Probab=100.00  E-value=1.6e-34  Score=252.54  Aligned_cols=348  Identities=56%  Similarity=0.943  Sum_probs=284.3

Q ss_pred             CCCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhH
Q 045073            1 DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGA   80 (402)
Q Consensus         1 ~~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~   80 (402)
                      |||.+.+..+|.+..++||...+.+.+.+++|.+.|.+++..+...+.+..+++        ..+..-..-||..+.+++
T Consensus       161 DYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~--------~~~~~ld~vWRl~~glg~  232 (538)
T KOG0252|consen  161 DYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGP--------STYPHLDGVWRIIFGLGA  232 (538)
T ss_pred             CCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCC--------CCchHHHHHHHHHHHHHH
Confidence            899999999999999999999999999999999999999998887776543332        111123456999999999


Q ss_pred             HHHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHH
Q 045073           81 VPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTS  160 (402)
Q Consensus        81 i~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (402)
                      +|+++.+..++.||||+||..+..++.+.+.++..+....+.+++.+. +...+..+....+|...+.+++-+.++..+.
T Consensus       233 vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~-~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~  311 (538)
T KOG0252|consen  233 VPALLVLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTA-ESDVPPPSNSFGLFSRLFLRWHGKHLLGTAG  311 (538)
T ss_pred             HHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhcc-ccCCCCcccccchHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999976666666666655555555443333332 2222334455567777777777789999999


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHH
Q 045073          161 TWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM  240 (402)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~  240 (402)
                      .||...+.+|...++...+++++|+.+.....   ...+..+.....+..++.++|..+..+++|++|||+..+.+++++
T Consensus       312 ~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~---~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~  388 (538)
T KOG0252|consen  312 TWFLLDIAFYGQNLFQSVIFSAIGVIPSANTY---HELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIM  388 (538)
T ss_pred             HHHhhhhhhhccccHHHHHHHhhccCCCcchH---HHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHH
Confidence            99999999999999999999999988876543   444456666777778888899999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHH
Q 045073          241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAG  320 (402)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~  320 (402)
                      ++..+.++..+..   .              .....+++++.+..++..+|++..++.+.+|.+|++.|+++.|+..+.+
T Consensus       389 ~i~~~~~~~~y~~---~--------------~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~G  451 (538)
T KOG0252|consen  389 TIFFFVIAGPYNQ---L--------------ENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASG  451 (538)
T ss_pred             HHHHHHHcCCccc---c--------------cccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhc
Confidence            8888877775432   1              2234677788888888899999999999999999999999999999999


Q ss_pred             HHhHHHHhHhHHhhhh-----ccCCcchhhHHHHHHHHHHHhhheeeeeccCCccccccccchh
Q 045073          321 KAGAIVGAFGVQYYTQ-----KGDKQIKQSIITLAVVNFLGFLCSFMVPETNGLSLEELSGEDK  379 (402)
Q Consensus       321 ~~g~~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~~~~~~~~~~~~~  379 (402)
                      .+|++++...+.++.+     ..  +.+.++++++++++++.+..+++|||++++++|++++.+
T Consensus       452 K~GAivg~~~F~~~t~~~yp~~~--g~~~v~~i~~~~~~~gi~~T~l~pEtk~~~leei~~e~~  513 (538)
T KOG0252|consen  452 KAGAIVGAFGFLYLTDHNYPPNI--GVRNVFIILAGCMLLGILFTLLIPETKGKSLEEISNEEE  513 (538)
T ss_pred             cchHHHHHHHhhHhhhccCCccc--cchHHHHHHHHHHHHhHheeEEeecccccCHHHhcChhh
Confidence            9999999999999988     44  788999999999999999999999999999998865533

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=99.97  E-value=1.3e-29  Score=245.23  Aligned_cols=333  Identities=18%  Similarity=0.269  Sum_probs=224.7

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      |++.++++|++|+++||+.++++.+++.+|.++++.++..+....+....          .+......+||+++++++++
T Consensus       274 p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~----------~g~~~~~~gWR~l~~i~~lp  343 (742)
T TIGR01299       274 PIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQ----------MGSAYQFHSWRVFVIVCAFP  343 (742)
T ss_pred             HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhc----------cccccccccHHHHHHHHHHH
Confidence            56789999999999999999999999999999999988777632211000          00011345899999999999


Q ss_pred             HHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhcccccccc-----------------ccCCCCCCCCCc--------
Q 045073           83 AALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVA-----------------TSAYPVPVSPEA--------  137 (402)
Q Consensus        83 ~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~--------  137 (402)
                      +++.++..+++||||+|+.. +++.+++.+.+++..+.+....                 .++..+.++...        
T Consensus       344 ~ll~ll~~~~lPESPrwL~~-~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  422 (742)
T TIGR01299       344 CVFAIGALTFMPESPRFFLE-NGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFV  422 (742)
T ss_pred             HHHHHHHHHHcCCCHHHHHH-CCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchh
Confidence            98888888899999999854 4566667666666654332100                 000000000000        


Q ss_pred             -------cccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhc----------------------Ccchh
Q 045073          138 -------STYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIYPAT----------------------GIVRK  188 (402)
Q Consensus       138 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------g~~~~  188 (402)
                             ..|..++.-+.++.++.++.+++.++...+++|+...|+|.+++..                      +++..
T Consensus       423 ~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  502 (742)
T TIGR01299       423 RALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLE  502 (742)
T ss_pred             hhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchh
Confidence                   0011122222223445788888899999999999999999886442                      00000


Q ss_pred             hh-------------hh-----------------------------hhH----------------H--------------
Q 045073          189 AA-------------AM-----------------------------DAI----------------E--------------  196 (402)
Q Consensus       189 ~~-------------~~-----------------------------~~~----------------~--------------  196 (402)
                      ..             ++                             +.+                .              
T Consensus       503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  582 (742)
T TIGR01299       503 NQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEG  582 (742)
T ss_pred             hhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCc
Confidence            00             00                             000                0              


Q ss_pred             ---------HHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCc
Q 045073          197 ---------EVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLH  267 (402)
Q Consensus       197 ---------~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (402)
                               ..........++..++.++|.+++|+++||+|||+++.++.++.+++++++.+.                 
T Consensus       583 c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~-----------------  645 (742)
T TIGR01299       583 CPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFG-----------------  645 (742)
T ss_pred             cCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-----------------
Confidence                     000112334566778899999999999999999999999988888877766553                 


Q ss_pred             cccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHH
Q 045073          268 EYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSII  347 (402)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~  347 (402)
                          .+....+++.. +.+++..+..+..+++++|++|++.|++++|+.+..+++|++++|++.+.+.+.   +...+|+
T Consensus       646 ----~s~~~ll~~~~-l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~---~~~~pf~  717 (742)
T TIGR01299       646 ----NSESAMIALLC-LFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI---TKAAPIL  717 (742)
T ss_pred             ----ccHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhHHHHH
Confidence                12222222222 223333445567888999999999999999999999999999999999887764   5567888


Q ss_pred             HHHHHHHHHhhheeeeeccCCccc
Q 045073          348 TLAVVNFLGFLCSFMVPETNGLSL  371 (402)
Q Consensus       348 ~~~~~~~i~~i~~~~~~et~~~~~  371 (402)
                      +++++.+++.++.+++|||+++.+
T Consensus       718 i~a~~lll~~ll~~~LPET~~~~l  741 (742)
T TIGR01299       718 FASAALACGGLLALKLPDTRGQVL  741 (742)
T ss_pred             HHHHHHHHHHHHHHhCCCCccccc
Confidence            888888888777777899988754

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

>PRK10642 proline/glycine betaine transporter; Provisional

Probab=99.96  E-value=3e-27  Score=224.30  Aligned_cols=303  Identities=16%  Similarity=0.162  Sum_probs=189.7

Q ss_pred             CCCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhH
Q 045073            1 DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGA   80 (402)
Q Consensus         1 ~~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~   80 (402)
                      +++.+.++++|++|+++||++.++.+.+..+|.++++.+...+.....+.               ....+|||++|++++
T Consensus       135 ~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~---------------~~~~~gWR~~f~i~~  199 (490)
T PRK10642        135 EYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEA---------------NFLDWGWRIPFFIAL  199 (490)
T ss_pred             hHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH---------------HhcCccHHHHHHHHH
Confidence            45678899999999999999999999999999998887776654322110               113589999999988


Q ss_pred             HHHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHH
Q 045073           81 VPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTS  160 (402)
Q Consensus        81 i~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (402)
                      +++++.++++.++||||+|...+++.+++..               +...+  +++...     ....+++++.+.....
T Consensus       200 ~~~l~~~~~~~~~~esp~~~~~~~~~~~~~~---------------~~~~~--~~~~~~-----~~~~~~~~~~~~~~~~  257 (490)
T PRK10642        200 PLGIIGLYLRHALEETPAFQQHVDKLEQGDR---------------EGLQD--GPKVSF-----KEIATKHWRSLLTCIG  257 (490)
T ss_pred             HHHHHHHHHHHcCCCChhHHHHHHhhhhhcc---------------ccccc--cccCCH-----HHHHHHhHHHHHHHHH
Confidence            7777777777789999998532111000000               00000  000111     1122222233333333


Q ss_pred             HHHHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHH
Q 045073          161 TWFLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL  239 (402)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~  239 (402)
                      ..+.....+|....|.|.+++ ..|++......            ......++.+++.++.|+++||+|||+.+..+.++
T Consensus       258 ~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~  325 (490)
T PRK10642        258 LVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVL------------IIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVA  325 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence            444555678888889999885 46777654332            45556777888888999999999999988777654


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH
Q 045073          240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA  319 (402)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~  319 (402)
                      ..+..+.+.....                   ......+.+..+..++...........+..|.+|++.|+++.|+.+..
T Consensus       326 ~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~  386 (490)
T PRK10642        326 LFVLAIPAFILIN-------------------SNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNI  386 (490)
T ss_pred             HHHHHHHHHHHHh-------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHH
Confidence            3332222111111                   111112211111111111111223455668999999999999987777


Q ss_pred             HHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeeccCCcccc
Q 045073          320 GKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETNGLSLE  372 (402)
Q Consensus       320 ~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~~~~~~  372 (402)
                      ..+++.++|.+.+++.+..+ ++..++++..++++++.+..+++||++++..+
T Consensus       387 ~~~~g~~~p~i~g~l~~~~~-~~~~~~~~~~~~~~i~~~~~~~~pes~~~~~~  438 (490)
T PRK10642        387 SVLVAGLTPTLAAWLVESTQ-NLMMPAYYLMVVAVIGLITGVTMKETANRPLK  438 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHhC-CchHHHHHHHHHHHHHHHHHHHhccccCCCCC
Confidence            88888899999998877542 45666666666667666666667998776554

>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]

Probab=99.96  E-value=1.7e-26  Score=196.67  Aligned_cols=315  Identities=17%  Similarity=0.257  Sum_probs=220.4

Q ss_pred             CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073            2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV   81 (402)
Q Consensus         2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i   81 (402)
                      +|...++-.|..|..+|+..+... ..+.+|.++...++....                       .+.||||..+...+
T Consensus       183 ~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm-----------------------~~~gwr~~l~~~~~  238 (528)
T KOG0253|consen  183 LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVM-----------------------SNFGWRYLLFTSST  238 (528)
T ss_pred             ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHH-----------------------HhhhHHHHHHHHHh
Confidence            456667788999999999998888 899999999999999887                       67899999999888


Q ss_pred             HHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhcccccc----------------ccccCCCCC-----CCCCcccc
Q 045073           82 PAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLT----------------VATSAYPVP-----VSPEASTY  140 (402)
Q Consensus        82 ~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~-----~~~~~~~~  140 (402)
                      |..+.....+++||||||+.. +++++++.+.++++.+.|..                +|..+..+.     ++......
T Consensus       239 pl~~~a~f~~w~~ESpRf~~~-~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~  317 (528)
T KOG0253|consen  239 PLMFAARFLVWVYESPRFYLA-KGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTT  317 (528)
T ss_pred             HHHHHHHHHhhcccCcchhhh-cCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchH
Confidence            888888888999999999865 77788888888776654411                111111111     11112223


Q ss_pred             ccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcC---cch----hhhhhhhH-HHHHHHhHHHHHHHHhh
Q 045073          141 GLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIYPATG---IVR----KAAAMDAI-EEVFRISKAMFLVALFA  212 (402)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~  212 (402)
                      +++... +|   +..+..+..+|.....+|+.......+++...   ...    .+...... +........-..+..+.
T Consensus       318 nLlsp~-lr---kttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitsla  393 (528)
T KOG0253|consen  318 NLLSPK-LR---KTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLA  393 (528)
T ss_pred             hhcChH-HH---HHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHh
Confidence            333333 23   35677788888888899998887777665422   111    11110000 00111222245566788


Q ss_pred             hhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCC
Q 045073          213 TVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGP  292 (402)
Q Consensus       213 ~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (402)
                      .++|.++.++++||+|||+.+..++++++++.+.+....                    ... ....+....-.+ ..+.
T Consensus       394 efPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~--------------------~rn-~~tvllf~araf-isg~  451 (528)
T KOG0253|consen  394 EFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCK--------------------TRN-AYTVLLFTARAF-ISGA  451 (528)
T ss_pred             hCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhc--------------------Ccc-hhHHHHHHHHHH-Hhch
Confidence            999999999999999999999999888888776665532                    111 222222222233 3344


Q ss_pred             ccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee-eccCCccc
Q 045073          293 NSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV-PETNGLSL  371 (402)
Q Consensus       293 ~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~-~et~~~~~  371 (402)
                      +.+.+.|+.|++|+..|+++.|.+...+++|+++.|++. ...+.   +...+..+++++++++.+.+.++ -|||+|.+
T Consensus       452 fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA-~~~e~---s~sl~i~vy~~~~ilagIavcffPiEtkGR~l  527 (528)
T KOG0253|consen  452 FQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA-MRAEL---STSLPIFVYGALFILAGIAVCFFPIETKGRSL  527 (528)
T ss_pred             heEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH-HHhcc---ceeehHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence            558999999999999999999999999999999999888 33222   45567778888888888888888 49998864

>PRK10077 xylE D-xylose transporter XylE; Provisional

Probab=99.96  E-value=2.8e-27  Score=224.78  Aligned_cols=325  Identities=19%  Similarity=0.208  Sum_probs=203.8

Q ss_pred             CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073            2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV   81 (402)
Q Consensus         2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i   81 (402)
                      +|.+.++++|++|+++||+++++.+.+..+|.++++.++..+.......               .....+||+.|++.++
T Consensus       138 ~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~---------------~~~~~gWr~~f~~~~~  202 (479)
T PRK10077        138 SMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDAS---------------WLNTDGWRYMFASEAI  202 (479)
T ss_pred             hhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCccc---------------ccccCChHHHHHHHHH
Confidence            4667899999999999999999999999999999988877664211000               1145799999999888


Q ss_pred             HHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccc-cccCCCCC-CCCCccccccchhhhhhhhhHHHHHHH
Q 045073           82 PAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTV-ATSAYPVP-VSPEASTYGLFSKEFVQKHGLHLLGTT  159 (402)
Q Consensus        82 ~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (402)
                      +.++..+..+++||+|+|+.. +++.+++.+...+..+.+..+ ..++..+. ..++......+.  .  ..........
T Consensus       203 ~~~~~~~~~~~l~~s~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~  277 (479)
T PRK10077        203 PALLFLMLLYFVPETPRYLMS-RGKQEQAEGILRKIMGNTLATQALQEIKHSLDHGRKTGGKLLM--F--GVGVIVIGVM  277 (479)
T ss_pred             HHHHHHHHHHcCCCCcHHHHH-cCCHHHHHHHHHHHcCChhHHHHHHHHHHHHHHhhhhhhhhcc--h--hHHHHHHHHH
Confidence            887777777789999998643 333333333333222111000 00000000 000000000000  0  0000111111


Q ss_pred             HHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHH
Q 045073          160 STWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL  239 (402)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~  239 (402)
                      ...+.....++...++.|.+.++.|.+......            ......+..+++.+++++++||+|||++++.+.++
T Consensus       278 ~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~------------~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~  345 (479)
T PRK10077        278 LSVFQQFVGINVVLYYAPEIFKTLGASTDIALL------------QTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALG  345 (479)
T ss_pred             HHHHHHHhChhHHHHHHHHHHHHcCCCCchHHH------------HHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHH
Confidence            222233344556667788888888877654332            44556677788889999999999999999999888


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH
Q 045073          240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA  319 (402)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~  319 (402)
                      ++++.+++......  .               ...............+...+..+..+.+++|.+|++.|+++.|+.+..
T Consensus       346 ~~v~~~~l~~~~~~--~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~  408 (479)
T PRK10077        346 MAIGMFSLGTAFYT--Q---------------APGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAA  408 (479)
T ss_pred             HHHHHHHHHHHHhc--C---------------cccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHH
Confidence            88877766543211  0               111122222222222223344567788999999999999999999999


Q ss_pred             HHHhHHHHhHhHHhhh------hccCCcchhhHHHHHHHHHHHhhheee-eeccCCccccccccc
Q 045073          320 GKAGAIVGAFGVQYYT------QKGDKQIKQSIITLAVVNFLGFLCSFM-VPETNGLSLEELSGE  377 (402)
Q Consensus       320 ~~~g~~i~~~~~~~~~------~~~~~~~~~~~~~~~~~~~i~~i~~~~-~~et~~~~~~~~~~~  377 (402)
                      ++++.++++.+.+.+.      +..  ++...|+++++.++++.++.++ .||+|+++.+|.++.
T Consensus       409 ~~~g~~~~~~~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~  471 (479)
T PRK10077        409 QWIANYFVSWTFPMMDKNSWLVAHF--HNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEEMEAL  471 (479)
T ss_pred             HHHHHHHHHHHhHHHHhccchhhhc--cCccHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHH
Confidence            9999999987776554      233  6677888888777777766654 599998877655433

>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]

Probab=99.95  E-value=1.8e-26  Score=219.80  Aligned_cols=325  Identities=22%  Similarity=0.266  Sum_probs=229.8

Q ss_pred             cchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHH
Q 045073            4 LSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPA   83 (402)
Q Consensus         4 ~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~   83 (402)
                      +++.|++|++|++.||...+..+....+|..++..++....+                      ..++||..+.++.+++
T Consensus       162 ~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~----------------------~~~~Wr~~~~~~~i~~  219 (513)
T KOG0254|consen  162 LAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSK----------------------VYAGWRIPLGLALIPA  219 (513)
T ss_pred             cchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhcc----------------------CCccHHHHHHHHHHHH
Confidence            568999999999999999999999999999999666665530                      1168999999999999


Q ss_pred             HHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhcccc---ccccccCCC-----CCC-CCCc-cccccchhhhhhhhhH
Q 045073           84 ALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTD---LTVATSAYP-----VPV-SPEA-STYGLFSKEFVQKHGL  153 (402)
Q Consensus        84 ~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-----~~~-~~~~-~~~~~~~~~~~~~~~~  153 (402)
                      ++..+..+++||||+|+.. +++.+++.+.+.+..+.+   .+.+.++..     +.. ...+ ...+++. +.  ...+
T Consensus       220 ~~~~~~~~~~pesp~~L~~-~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~--~~~~  295 (513)
T KOG0254|consen  220 VILALGMLFLPESPRWLIE-KGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFS-PK--VRKR  295 (513)
T ss_pred             HHHHHHHHhCCCChHHHHH-cCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcC-cc--hHHH
Confidence            9988888889999999854 566666777777666622   111111111     000 0111 1122222 11  1112


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073          154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ  233 (402)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~  233 (402)
                      ..+...+..+.+..+.+....|.+.+++..|.+... ..            ...+..+..+++..++.++.||+|||+++
T Consensus       296 ~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~------------~~~~~~~v~~~~t~~~~~lvd~~gRr~ll  362 (513)
T KOG0254|consen  296 LIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FL------------ASIILGVVNFLGTLVATYLVDRFGRRKLL  362 (513)
T ss_pred             HHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HH------------HHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence            455666777777788889999999999998887553 11            45555666777777889999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073          234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH  313 (402)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~  313 (402)
                      +.+...+.+++++++............         .....+..+....+....+..+..++.|.+.+|.+|.+.|+.+.
T Consensus       363 l~s~~~m~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~  433 (513)
T KOG0254|consen  363 LFGAAGMSICLVILAVVGVFALYYPNS---------SKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGA  433 (513)
T ss_pred             HHhHHHHHHHHHHHHHHHHHhccCCCc---------ccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhH
Confidence            999999999998888765433221000         00222334444445555667888899999999999999999999


Q ss_pred             hHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhh-hee-eeeccCCccccccccch
Q 045073          314 GISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFL-CSF-MVPETNGLSLEELSGED  378 (402)
Q Consensus       314 ~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i-~~~-~~~et~~~~~~~~~~~~  378 (402)
                      ++....+++.+.+....+.......  +....|..++..+.+... +.+ ++||||+++++|+++..
T Consensus       434 s~~~~~n~~~~~~v~~~~~~~~~~~--~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~  498 (513)
T KOG0254|consen  434 SLAVAVNWLWNFLISFFFPFITEAL--GIGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELF  498 (513)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc--cccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHH
Confidence            9999999999887777777766653  334566666666666555 444 56999999999887653

>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters

Probab=99.95  E-value=1.6e-31  Score=251.88  Aligned_cols=324  Identities=27%  Similarity=0.400  Sum_probs=218.2

Q ss_pred             CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073            2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV   81 (402)
Q Consensus         2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i   81 (402)
                      ++.++.|+.|+.|+++||+..++.+.++.+|.+++..++..+..                    ..+..+||+.++++++
T Consensus       120 ~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~--------------------~~~~~~Wr~~~~~~~~  179 (451)
T PF00083_consen  120 YVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSY--------------------YSDNWGWRILLIFGAI  179 (451)
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccc--------------------cccccccccccccccc
Confidence            56788999999999999999999999999999999888766531                    1124679999999999


Q ss_pred             HHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccc-cccCCC-CCC---CCCccccccchhhhhhhhhHHHH
Q 045073           82 PAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTV-ATSAYP-VPV---SPEASTYGLFSKEFVQKHGLHLL  156 (402)
Q Consensus        82 ~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~  156 (402)
                      ++++.++...++||||||+.. +++.+|+.+.+++..+.+..+ +.++.. +.+   +.+....++++++..++  +...
T Consensus       180 ~~l~~~~~~~~~pESP~wL~~-~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~  256 (451)
T PF00083_consen  180 PSLLVLLLRFFLPESPRWLLS-KGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRK--RLLI  256 (451)
T ss_pred             ccccccccccccccccceecc-cccccccccccccccccccccccccccccccccccccceeeeeccccccccc--cccc
Confidence            998888888899999999854 455556666666644332211 111111 111   11112233333322111  1233


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHH
Q 045073          157 GTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGG  236 (402)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~  236 (402)
                      ...+..+....+.+....+.+.++++.|.++..  .            ......+..+++.+++.+++||+|||++++.+
T Consensus       257 ~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~~--~------------~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~  322 (451)
T PF00083_consen  257 ALLLQFFQQFSGINFIFYYSPSIFENAGISNSF--L------------ATLILGLVNFLGTLLAIFLIDRFGRRKLLIIG  322 (451)
T ss_pred             ccccccccccccccccccccccccccccccccc--c------------cccccccccccccccccccccccccccccccc
Confidence            333333333445556667778888887776651  1            34455566777777888999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHH
Q 045073          237 FLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGIS  316 (402)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~  316 (402)
                      ..+++++.+.++.........+ +           ......+....+.......++.+..+.+++|++|++.|+++.++.
T Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~-~-----------~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~  390 (451)
T PF00083_consen  323 LLLMAICSLILGIIFFLGVSSS-S-----------WWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLS  390 (451)
T ss_pred             cccccccccccccccccccccc-c-----------ccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence            8887777766651111111110 0           011222233333333445577788889999999999999999999


Q ss_pred             HHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeeccCCcccccccc
Q 045073          317 AAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPETNGLSLEELSG  376 (402)
Q Consensus       317 ~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~~~~~~~~~~  376 (402)
                      ...+++++++++.+.+.+.+..  +....+.++++++++..++.+ ++|||++++++|+++
T Consensus       391 ~~~~~i~~~i~~~~~~~~~~~~--~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~  449 (451)
T PF00083_consen  391 YAVGRIGGFIIPFLFPYLFNNL--GGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQE  449 (451)
T ss_pred             cccccccccccccccccccccc--cccccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHh
Confidence            9999999999999988888765  435667777777777666655 569999999998765

Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane

>TIGR00898 2A0119 cation transport protein

Probab=99.94  E-value=7.6e-26  Score=216.30  Aligned_cols=298  Identities=18%  Similarity=0.287  Sum_probs=196.7

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      +...+++.|++|+++|+++.++.+.+..+|.++++.+++.+.                          +||+.+++.+++
T Consensus       199 ~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~--------------------------~wr~~~~~~~i~  252 (505)
T TIGR00898       199 VQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP--------------------------DWRWLQLAVSLP  252 (505)
T ss_pred             HHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh--------------------------HHHHHHHHHHHH
Confidence            556789999999999999999999999999999999887663                          399999998888


Q ss_pred             HHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhcccccccccc---CC--CCC---CCCCccccccchhhhhhhhhHH
Q 045073           83 AALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATS---AY--PVP---VSPEASTYGLFSKEFVQKHGLH  154 (402)
Q Consensus        83 ~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~---~~~~~~~~~~~~~~~~~~~~~~  154 (402)
                      .++..+..+++||||+|+.. +++.+++.+.+++..+.+.....+   +.  ++.   ..++....++++.+..+   +.
T Consensus       253 ~~~~~~~~~~~~esp~~l~~-~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~  328 (505)
T TIGR00898       253 TFLFFLLSWFVPESPRWLIS-QGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLR---KT  328 (505)
T ss_pred             HHHHHHHHHhcCCChHHHHH-CCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHH---HH
Confidence            88877777889999999754 444455555554433322111000   00  000   00011222233322222   23


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHH
Q 045073          155 LLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQL  234 (402)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~  234 (402)
                      .+.....++.....+|+...+.+.    .+.+...               ......+..+++.++.+++.||+|||+.+.
T Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~---------------~~~~~~~~~i~~~~~~~~l~dr~grr~~~~  389 (505)
T TIGR00898       329 TLCLMMLWFTTAFSYYGLVLDLGN----LGGNIYL---------------DLFISGLVELPAKLITLLLIDRLGRRYTMA  389 (505)
T ss_pred             HHHHHHHHHHHHHHHHHHhccccc----cCCChHH---------------HHHHHHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence            444444555555555555444443    3333211               334456677788889999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhh
Q 045073          235 GGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHG  314 (402)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~  314 (402)
                      ++.++.+++++++.....                   ...+....+. +...++..+..+..+.+.+|.+|++.|+++.|
T Consensus       390 ~~~~~~~~~~l~~~~~~~-------------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g  449 (505)
T TIGR00898       390 ASLLLAGVALLLLLFVPV-------------------DLYFLRTALA-VLGKFGITSAFQMVYLYTAELYPTVVRNLGVG  449 (505)
T ss_pred             HHHHHHHHHHHHHHHcCC-------------------CchHHHHHHH-HHHHHHHHHHHHHHHHHhcccccHHHHhhhHh
Confidence            888877777665554310                   1112222222 22222223334567788999999999999999


Q ss_pred             HHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeeccCCccccc
Q 045073          315 ISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETNGLSLEE  373 (402)
Q Consensus       315 ~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~~~~~~~  373 (402)
                      +.+..+++|++++|.+.+ +.+.   +...++.+++++.+++.++.+++|||++++++|
T Consensus       450 ~~~~~~~ig~~i~p~i~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~lpet~~~~l~~  504 (505)
T TIGR00898       450 VCSTMARVGSIISPFLVY-LGEK---WLFLPLVLFGGLALLAGILTLFLPETKGVPLPE  504 (505)
T ss_pred             HHHHHHHHHHHHHhHHHH-HHHH---HHhhHHHHHHHHHHHHHHHHHcCcCCCCCCCCC
Confidence            999999999999999888 4332   566788888888888887777889999887654

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=99.94  E-value=3.9e-25  Score=210.03  Aligned_cols=320  Identities=23%  Similarity=0.314  Sum_probs=207.0

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHH---HHHHhhhhccccCcccccccccccCCCCCchhHHHHHHh
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVIS---LIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFG   79 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~   79 (402)
                      +...+++.|++|+++|++++++.+.+..+|.++++.++   ...                       ....+||+.|++.
T Consensus       146 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~-----------------------~~~~~w~~~f~~~  202 (481)
T TIGR00879       146 ALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSL-----------------------NNTLGWRIPLGLQ  202 (481)
T ss_pred             hHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcC-----------------------CCCccHHHHHHHH
Confidence            45678999999999999999999999999999999988   322                       1557899999998


Q ss_pred             HHHHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccc--c--------CCCCCCCCCccccccchhhhhh
Q 045073           80 AVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVAT--S--------AYPVPVSPEASTYGLFSKEFVQ  149 (402)
Q Consensus        80 ~i~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~--------~~~~~~~~~~~~~~~~~~~~~~  149 (402)
                      ++..++.++..+++||+|+++.. +++.+++.+...+..+.+..+..  +        ...+.+..+.. +..+.....+
T Consensus       203 ~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  280 (481)
T TIGR00879       203 LIPAGLLFLGLFFLPESPRWLVG-KGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPS-WGSLFSSTRR  280 (481)
T ss_pred             HHHHHHHHHHHhcCCCChHHHHH-cCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhcccc-HHHHHhcCch
Confidence            77777777777889999987543 22222222222221111100000  0        00000000000 1111111000


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccch
Q 045073          150 KHGLHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGR  229 (402)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~gr  229 (402)
                      ..++.++...+..+......+....+.|.+.++.|++....+.            ......++.+++.++.++++||+||
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------------~~~~~~~~~~~~~~~~g~l~d~~~~  348 (481)
T TIGR00879       281 IRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFL------------VSIIVGAVNFAFTFVAIFLVDRFGR  348 (481)
T ss_pred             hHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHH------------HHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            0122334444444444444555667788888888888754433            6667777888899999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchh
Q 045073          230 FIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLR  309 (402)
Q Consensus       230 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r  309 (402)
                      |+.+..+..+.+++.+++.......... .+ +         ......+....+...+...+..+....+..|.+|++.|
T Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  417 (481)
T TIGR00879       349 RPLLLIGAAGMAICLFVLGILGASFVTG-SS-K---------SSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLR  417 (481)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcccCC-cc-c---------chhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHH
Confidence            9999888777777666665332211110 00 0         01222333333333444455566777888999999999


Q ss_pred             hhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheee-eeccCCcccc
Q 045073          310 STCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFM-VPETNGLSLE  372 (402)
Q Consensus       310 ~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~-~~et~~~~~~  372 (402)
                      +++.++.+...++++++++.+.+.+.+..  ++...|++.+++++++.++.++ .||+++++.+
T Consensus       418 ~~~~~~~~~~~~lg~~i~~~~~~~~~~~~--~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~  479 (481)
T TIGR00879       418 PKGISIAVAANWLANFIVGFLFPTMLESI--GVGGVFIFFGGLNVLGLIFVYFFLPETKGRTLE  479 (481)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CccceehhHHHHHHHHHHHHheecccCCCCChh
Confidence            99999999999999999999999988876  7888888888888887777654 4888766543

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

>PRK09952 shikimate transporter; Provisional

Probab=99.93  E-value=2.3e-24  Score=201.69  Aligned_cols=293  Identities=15%  Similarity=0.155  Sum_probs=184.6

Q ss_pred             CCCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhH
Q 045073            1 DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGA   80 (402)
Q Consensus         1 ~~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~   80 (402)
                      ++|.+..++.|++|+++|++..+..+.+..+|.+++..+...+.....+.               ....+|||++|++++
T Consensus       142 ~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~---------------~~~~~gWr~~f~~~~  206 (438)
T PRK09952        142 EWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDE---------------QFLSWGWRIPFLFSI  206 (438)
T ss_pred             cHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH---------------HhhccChHHHHHHHH
Confidence            45677889999999999999999999999999999988777665322110               113579999999988


Q ss_pred             HHHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHH
Q 045073           81 VPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTS  160 (402)
Q Consensus        81 i~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (402)
                      ++.++.+..+..+||+|+|...+++ +++.                       +++...    .+..+ ++++.......
T Consensus       207 ~~~l~~~~l~~~~~es~~~~~~~~~-~~~~-----------------------~~~~~~----~~~l~-~~~~~~~~~~~  257 (438)
T PRK09952        207 VLVLIALWVRNGMEESAEFEQQQHE-QAAA-----------------------KKRIPV----IEALL-RHPGAFLKIIA  257 (438)
T ss_pred             HHHHHHHHHHHhCCCChhHHHHHhh-cccc-----------------------cccCCH----HHHHH-HchHHHHHHHH
Confidence            8877766666778999987422111 0000                       000000    11111 12222333333


Q ss_pred             HHHHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHH
Q 045073          161 TWFLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL  239 (402)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~  239 (402)
                      ..+......|....+.|.+.+ ..|.+......            ......+..+++.++.|+++||+|||+.+..+.++
T Consensus       258 ~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~------------~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~  325 (438)
T PRK09952        258 LRLCELLTMYIVTAFALNYSTQNLGLPRELFLN------------IGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALI  325 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHH
Confidence            344445567777778888774 46766543211            33344556677778899999999999988877655


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH
Q 045073          240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA  319 (402)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~  319 (402)
                      ..++.+.+.....  .                .+....+....+..++......+..+++.+|.+|++.|+++.++.+..
T Consensus       326 ~~~~~~~~~~~~~--~----------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~  387 (438)
T PRK09952        326 GTLSAFPFFMALE--A----------------QSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQV  387 (438)
T ss_pred             HHHHHHHHHHHHH--c----------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHH
Confidence            4443332222111  0                111122222222222222233445678889999999999999997766


Q ss_pred             HH-HhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeeccC
Q 045073          320 GK-AGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETN  367 (402)
Q Consensus       320 ~~-~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~  367 (402)
                      +. +++.++|.+.+.+.+..+.+|...+...+++.+++.+..+.++|++
T Consensus       388 ~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~  436 (438)
T PRK09952        388 ASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKDNQ  436 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHccccc
Confidence            55 7889999999999875432577777777777787777766666643

>PRK10406 alpha-ketoglutarate transporter; Provisional

Probab=99.91  E-value=1.1e-22  Score=190.26  Aligned_cols=287  Identities=20%  Similarity=0.195  Sum_probs=171.5

Q ss_pred             CCCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhH
Q 045073            1 DYPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGA   80 (402)
Q Consensus         1 ~~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~   80 (402)
                      |+|.+.++++|++|+++||++.++.+.+...|.++++.+...+.....+.               ....+|||++|++++
T Consensus       141 ~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~---------------~~~~~gWr~~F~i~~  205 (432)
T PRK10406        141 EYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDA---------------ELREWGWRIPFALGA  205 (432)
T ss_pred             hHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH---------------HHhccchHHHHHHHH
Confidence            46788999999999999999999999998899988888766654322110               013579999999988


Q ss_pred             HHHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHH
Q 045073           81 VPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTS  160 (402)
Q Consensus        81 i~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (402)
                      +++++.++.+..+||+|++..  ++  .+                        + ..+.    + ...++ ++.......
T Consensus       206 ~~~ll~~~~~~~~~e~~~~~~--~~--~~------------------------~-~~~~----~-~l~~~-~~~~~~~~~  250 (432)
T PRK10406        206 VLAVVALWLRRQLDETSQQET--RA--LK------------------------E-AGSL----K-GLWRN-RRAFIMVLG  250 (432)
T ss_pred             HHHHHHHHHHhcCCCCchHHH--hh--hc------------------------c-cccH----H-HHHhh-HHHHHHHHH
Confidence            888887777777899876511  00  00                        0 0011    1 11111 112222222


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHH
Q 045073          161 TWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL  239 (402)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~  239 (402)
                      ..+.....+|....|.|.++++ .|++..+.+.            ......+...++..+.|+++||++||+.+..+..+
T Consensus       251 ~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~------------~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~  318 (432)
T PRK10406        251 FTAAGSLCFYTFTTYMQKYLVNTAGMHANVASG------------IMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSL  318 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHH
Confidence            2333355677788899998854 6877665433            44445555667777889999999999887766554


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH
Q 045073          240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA  319 (402)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~  319 (402)
                      .++..+.+.....   ..              ......+.+..+...... ...+..+.+.+|.+|++.|+++.|+.+..
T Consensus       319 ~~~~~~~~~~~~~---~~--------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~fp~~~r~t~~g~~~~~  380 (432)
T PRK10406        319 AALFTVPILSALQ---NV--------------SSPYAAFGLVMCALLIVS-FYTSISGILKAEMFPAQVRALGVGLSYAV  380 (432)
T ss_pred             HHHHHHHHHHHHH---cC--------------CcHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCCccchhhhHHHHH
Confidence            3333221111111   00              111111111111111111 11234567789999999999999999988


Q ss_pred             HHH-hHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeeccCCcc
Q 045073          320 GKA-GAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETNGLS  370 (402)
Q Consensus       320 ~~~-g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~~~~  370 (402)
                      +++ .+...|.+.+.+ +..+ .+...++..++..+++.+..+++ ++++|+
T Consensus       381 g~~~~g~~~p~~~~~l-~~~g-~~~~~~~~~~~~~~i~~~~~~~l-~~~~~~  429 (432)
T PRK10406        381 ANALFGGSAEYVALSL-KSIG-METAFFWYVTLMAVVAFLVSLML-HRKGKG  429 (432)
T ss_pred             HHHHHHhHHHHHHHHH-HHhC-CCcHHHHHHHHHHHHHHHHHHHh-hhcccc
Confidence            775 344577777755 4332 34455666666666666555544 334443

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]

Probab=99.91  E-value=5e-24  Score=186.17  Aligned_cols=291  Identities=16%  Similarity=0.204  Sum_probs=205.5

Q ss_pred             CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHH--HHHHhhhhccccCcccccccccccCCCCCchhHHHHHHh
Q 045073            2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVIS--LIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFG   79 (402)
Q Consensus         2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~   79 (402)
                      +|.+...++.|+|+++||+..++++.+.++|..+.+++.  +.+.                       .+.+||..|++.
T Consensus       135 wpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~-----------------------~~~~w~~~f~~p  191 (448)
T COG2271         135 WPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFA-----------------------FHGGWRAAFYFP  191 (448)
T ss_pred             CcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHH-----------------------hccchhHHHHHH
Confidence            688889999999999999999999999999999999988  5554                       556899999997


Q ss_pred             HHHHHH-HHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCC-ccccccchhhhhhhhhHHHHH
Q 045073           80 AVPAAL-TYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPE-ASTYGLFSKEFVQKHGLHLLG  157 (402)
Q Consensus        80 ~i~~~~-~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  157 (402)
                      ++.+++ .++.++.++|+|+-.-+  ..-++.       .++..+.+    ++.++++ -+.++.+.+-.+++  +.++.
T Consensus       192 giiaiival~~~~~~rd~Pqs~GL--P~ie~~-------~~d~~e~~----~~~~~~~~ls~~~i~~~YVL~N--k~iW~  256 (448)
T COG2271         192 GIIAIIVALILLFLLRDRPQSEGL--PPIEEY-------RGDPLEIY----EEEKENEGLTAWQIFVKYVLKN--KLIWL  256 (448)
T ss_pred             HHHHHHHHHHHHHHhCCCccccCC--CCHHHh-------hcCchhhh----hhhccCCCccHHHHHHHHHHcC--hHHHH
Confidence            777665 56666678999864221  111111       11111100    1111111 34455555555554  47888


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhcc--chhHHHH
Q 045073          158 TTSTWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRI--GRFIIQL  234 (402)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~--grr~~~~  234 (402)
                      +++........-|++.-|.|.|+.+ .|++..+++.            .....-.++++|++++|+++||+  |||....
T Consensus       257 la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~------------a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~  324 (448)
T COG2271         257 LALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANW------------AISLFEVAGLPGTLLAGWLSDKLFKGRRGPMA  324 (448)
T ss_pred             HHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHH------------HHHHHHHHhhHHHHHHHHHHHHhcccccchHH
Confidence            8888888899999999999999865 7888776655            77788899999999999999997  5665544


Q ss_pred             HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhh
Q 045073          235 GGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHG  314 (402)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~  314 (402)
                      +.+.+.....++..     +..+              ..+..+..++....++...++.-..-..+.|..|++..|++.|
T Consensus       325 ~i~~~~i~~~~~~~-----w~~~--------------~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~G  385 (448)
T COG2271         325 LIFMLLITASLVLY-----WLAP--------------NGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATG  385 (448)
T ss_pred             HHHHHHHHHHHHHH-----HcCC--------------CccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhc
Confidence            33222221111111     1111              2333444444444555556666566667899999999999999


Q ss_pred             HHHHHHHH-hHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073          315 ISAAAGKA-GAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV  363 (402)
Q Consensus       315 ~~~~~~~~-g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~  363 (402)
                      +...++.+ |...+....+++.|.+  +|...|.++.+.++++.++....
T Consensus       386 f~Glf~Yl~Ga~~a~~~~g~i~d~~--gW~g~Fi~~~~~a~l~~lll~~~  433 (448)
T COG2271         386 FVGLFAYLIGAALAGLPLGYIADTW--GWDGGFIVLSIAALLAILLLLPV  433 (448)
T ss_pred             hhhhHHHHhhHHhcCCcceeeEecC--CCcchHHHHHHHHHHHHHHHHHH
Confidence            99999999 8888889999998886  89999988888887777665543

>TIGR00903 2A0129 major facilitator 4 family protein

Probab=99.91  E-value=2.8e-22  Score=182.47  Aligned_cols=262  Identities=13%  Similarity=0.066  Sum_probs=169.5

Q ss_pred             chhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHH
Q 045073            5 SAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAA   84 (402)
Q Consensus         5 ~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~   84 (402)
                      ....++|++|+++|++++++.+.+..+|.++++.++..+.                       +..|||+.|++.+++++
T Consensus        99 ~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~-----------------------~~~gWr~~f~~~~~l~~  155 (368)
T TIGR00903        99 AFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIY-----------------------TAGGLQLLIIPIAAVAA  155 (368)
T ss_pred             HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------HccchHHHHHHHHHHHH
Confidence            3456799999999999999999999999999999999887                       56899999999555554


Q ss_pred             H-HHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHHH
Q 045073           85 L-TYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWF  163 (402)
Q Consensus        85 ~-~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (402)
                      + .++.++++||+|++.   ++.. +..+..                      +.     .++..++  +.++......+
T Consensus       156 ~~~~~~~~~lp~~p~~~---~~~~-~~~~~~----------------------~~-----~~~ll~~--~~~~~~~~~~~  202 (368)
T TIGR00903       156 AGIILVLAALPALPFQA---AEGF-GFKDAV----------------------KE-----FGALAGR--KDLWIIGAILG  202 (368)
T ss_pred             HHHHHHHHHcCCCCCCC---CCCc-chHHHH----------------------HH-----HHHHHcC--hhHHHHHHHHH
Confidence            4 555666799998762   1110 000000                      00     1112222  24566666677


Q ss_pred             HHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchh---HHHHH-HHHH
Q 045073          164 LLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRF---IIQLG-GFLL  239 (402)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr---~~~~~-~~~~  239 (402)
                      +....+++...|+|.++++.|++.. .+.            ......+...   +..++++||..||   +.... ...+
T Consensus       203 ~~~~~~~~~~~wlp~~L~~~g~s~~-~~~------------~~~l~~~~g~---~g~~~~~d~~~r~~~r~~~~~~~~~~  266 (368)
T TIGR00903       203 FGVALFDNLAIWLEAALRPAGLEDI-AGD------------AVALAILAGL---IGVAVIPDRVARAGLRSIYIRAAALL  266 (368)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCChH-HHH------------HHHHHHHHHH---HHHHHhhHHhhhhhhHHHHHHHHHHH
Confidence            7778888999999999988777643 222            2233333333   3457888887543   33222 2222


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH
Q 045073          240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA  319 (402)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~  319 (402)
                      .++....+...                     .+....+ .+....+++..+..+..+++.+|.+|++.|+++.|+.+..
T Consensus       267 ~a~~~~~~~~~---------------------~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~  324 (368)
T TIGR00903       267 IAAFFLALAFE---------------------LNRLALF-AFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFT  324 (368)
T ss_pred             HHHHHHHHHHc---------------------cccHHHH-HHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHH
Confidence            22222222211                     1111222 2222222333344455778899999999999999999999


Q ss_pred             HHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeee
Q 045073          320 GKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVP  364 (402)
Q Consensus       320 ~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~  364 (402)
                      ++++++++|.+.+.+..    +....|.++++..+++.+..++++
T Consensus       325 g~~~~~~~~~~~~~~~~----~~~~~f~~~~~~~~i~~~~~~~~~  365 (368)
T TIGR00903       325 SRAISVALALAAMLFIS----SAEAYFTFLAILITIAFAIALLLP  365 (368)
T ss_pred             HHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999999988887773    667778888888887777665434

This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.

>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

Probab=99.90  E-value=2.9e-22  Score=186.39  Aligned_cols=273  Identities=20%  Similarity=0.256  Sum_probs=180.5

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      +...+++.|++|+++|++++++.+.+..+|..+++.++..+.                       +..+||+.|++.++.
T Consensus       122 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~  178 (406)
T PRK11551        122 PNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAA-----------------------GDAAWRHIFYVGGVG  178 (406)
T ss_pred             HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----------------------cccCHHHHHHHHHHH
Confidence            345678999999999999999999999999999999887765                       567899999986655


Q ss_pred             HHH-HHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073           83 AAL-TYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST  161 (402)
Q Consensus        83 ~~~-~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (402)
                      .++ .++...++||+|++..  ++.+++..+..                        ....++....    +........
T Consensus       179 ~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~------------------------~~~~~~~~~~----~~~~~~~~~  228 (406)
T PRK11551        179 PLLLVPLLMRWLPESRAFAQ--AAGAGKQRAPV------------------------LRALFGEGRA----TATLLLWIS  228 (406)
T ss_pred             HHHHHHHHHHhCCCChhHHh--ccCcchhhhhh------------------------HHHHhhhhhh----hHHHHHHHH
Confidence            444 3444556899887531  11111000000                        0000011100    112222233


Q ss_pred             HHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHH
Q 045073          162 WFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMS  241 (402)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~  241 (402)
                      .+......+....+.|.+.++.|++..+.+.            ......++.+++.++.|++.||+|||+.+..+.....
T Consensus       229 ~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~  296 (406)
T PRK11551        229 YFFTLIVLYFLLNWLPSLLVGQGLSRSQAGL------------VQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGIL  296 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCChhhhhH------------HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            3333445566677889998888888776554            6667778889999999999999999998877655554


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHH
Q 045073          242 ICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGK  321 (402)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~  321 (402)
                      ++...+...                     .+. ....+..+..++...+..+..+++..|.+|++.|+++.|+.+....
T Consensus       297 ~~~~~~~~~---------------------~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~  354 (406)
T PRK11551        297 ASLAALAAA---------------------PSF-AGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGR  354 (406)
T ss_pred             HHHHHHHhc---------------------CcH-HHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhh
Confidence            444333221                     111 2222222233333334455677888999999999999999999999


Q ss_pred             HhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073          322 AGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV  363 (402)
Q Consensus       322 ~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~  363 (402)
                      +|..++|.+.+.+.+..+ ++...++....+.+++.++.+++
T Consensus       355 ~g~~~g~~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  395 (406)
T PRK11551        355 LGSMAGPLLAGQLLALGR-STVGVIGASIPVILVAALAALLL  395 (406)
T ss_pred             HHHHHHhhhHhhhhccCC-chHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999988643 45556666666666655555544

>PRK11663 regulatory protein UhpC; Provisional

Probab=99.90  E-value=3.5e-22  Score=186.94  Aligned_cols=289  Identities=12%  Similarity=0.091  Sum_probs=177.6

Q ss_pred             CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073            2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV   81 (402)
Q Consensus         2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i   81 (402)
                      ++...+++.|++|+++|++++++.+.+..+|.++++.+++.+.                       +..+||+.|++.++
T Consensus       129 ~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~-----------------------~~~gw~~~f~~~~i  185 (434)
T PRK11663        129 WPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIA-----------------------LHYGWRYGMMIAGI  185 (434)
T ss_pred             chHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------HcccHHHHHHHHHH
Confidence            4566788999999999999999999999999999999988886                       56789999998776


Q ss_pred             HHHH-HHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHH
Q 045073           82 PAAL-TYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTS  160 (402)
Q Consensus        82 ~~~~-~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (402)
                      ++++ .++..+++||+|++......++.+.          +..   +..++.++.+.+..+.++....++  +.++...+
T Consensus       186 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~----------~~~---~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  250 (434)
T PRK11663        186 IAIVVGLFLCWRLRDKPQAMGLPSVGEWRH----------DAL---ELAQQQEGAGLSRKEILTKYVLLN--PYIWLLSF  250 (434)
T ss_pred             HHHHHHHHHHHHcCCCHhhcCCCCcccccc----------ccc---ccchhccccCCChhhhHHHHHhcC--hHHHHHHH
Confidence            6554 4445556899886521100000000          000   000000000011111111111121  23444444


Q ss_pred             HHHHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhcc--chh-HHHHHH
Q 045073          161 TWFLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRI--GRF-IIQLGG  236 (402)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~--grr-~~~~~~  236 (402)
                      ..+......+....|.|.+++ +.|++..+.+.            ......++.+++.++.|+++||+  ++| ......
T Consensus       251 ~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~------------~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~  318 (434)
T PRK11663        251 SYVLVYVVRAAINDWGNLYMSETLGVDLVTANS------------AVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIF  318 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHH------------HHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHH
Confidence            444455566677778898884 57888776554            66677788899999999999998  333 322222


Q ss_pred             HHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHH
Q 045073          237 FLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGIS  316 (402)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~  316 (402)
                      .....+....+....    .               .+. ..........++...+..........|.+|++.|+++.|+.
T Consensus       319 ~~~~~~~~~~~~~~~----~---------------~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~  378 (434)
T PRK11663        319 AAGILLSVGSLWLMP----F---------------ASY-VMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFV  378 (434)
T ss_pred             HHHHHHHHHHHHHcc----c---------------ccH-HHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHH
Confidence            111111111111110    0               111 11111122222222222223344668999999999999999


Q ss_pred             HHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheee
Q 045073          317 AAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFM  362 (402)
Q Consensus       317 ~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~  362 (402)
                      +...++|++++|.+.+.+.+..  ++...|.+.+++.+++.+..+.
T Consensus       379 ~~~~~~g~~~~p~~~g~l~~~~--g~~~~f~~~~~~~~~~~~~~~~  422 (434)
T PRK11663        379 GLFAYLGAALSGYPLAKVLEIW--HWTGFFVVISIAAGISALLLLP  422 (434)
T ss_pred             HHHHHHHHHHhcccHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999987  8889999888888777665553

>PRK12307 putative sialic acid transporter; Provisional

Probab=99.90  E-value=1.1e-21  Score=183.71  Aligned_cols=264  Identities=17%  Similarity=0.131  Sum_probs=164.6

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      +....++.|++|+++|+++.++...+..+|.++++.+...+.                       +..+||+.|++..++
T Consensus       125 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~-----------------------~~~~w~~~f~i~~~~  181 (426)
T PRK12307        125 ACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFA-----------------------EAYGWRAAFFVGLLP  181 (426)
T ss_pred             HHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHc-----------------------ccCCHHHHHHHHHHH
Confidence            456788999999999999999999999999999998887765                       557899999987665


Q ss_pred             HHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073           83 AALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW  162 (402)
Q Consensus        83 ~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (402)
                      .++.+......||++++...  +.+++           +   +.++     ...+.....++....++..+.........
T Consensus       182 ~~~~~~~~~~~p~~~~~~~~--~~~~~-----------~---~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (426)
T PRK12307        182 VLLVIYIRARAPESKEWEEA--KLSGK-----------G---KHSQ-----SAWSVFSLSMKGLFNRAQFPLTLCVFIVL  240 (426)
T ss_pred             HHHHHHHHHHCCCChHHHHh--hhhcc-----------c---cccc-----cchhhhhHHHHHHHhhchHHHHHHHHHHH
Confidence            55554444456777654211  00000           0   0000     00000000111111111111222222222


Q ss_pred             HHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHH
Q 045073          163 FLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSI  242 (402)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~  242 (402)
                      +......+....+.|.++++.|.+....+.            ......++.+++.++.+++.||+|||+.+..+.++..+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------------~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~  308 (426)
T PRK12307        241 FSIFGANWPIFGLLPTYLAGEGFDTGVVSN------------LMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFL  308 (426)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence            333334444566788888888887665443            55667788889999999999999999988877766555


Q ss_pred             HHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHH
Q 045073          243 CMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKA  322 (402)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~  322 (402)
                      ..+.+....                    ...............+...+..+....++.|.+|++.|+++.|+.+....+
T Consensus       309 ~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~  368 (426)
T PRK12307        309 FIFPLFRIP--------------------QDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAAT  368 (426)
T ss_pred             HHHHHHHHc--------------------cccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhH
Confidence            443332210                    111111111121112222233344556778999999999999999999999


Q ss_pred             hHHHHhHhHHhhhhccCCcchh
Q 045073          323 GAIVGAFGVQYYTQKGDKQIKQ  344 (402)
Q Consensus       323 g~~i~~~~~~~~~~~~~~~~~~  344 (402)
                      ++.++|.+.+.+.+..  ++..
T Consensus       369 ~~~~gp~~~g~l~~~~--g~~~  388 (426)
T PRK12307        369 SGTFNSMAATWLGITM--GLGA  388 (426)
T ss_pred             HHHHHHHHHHHHHHcc--cHHH
Confidence            9999999999998876  5443

>TIGR02332 HpaX 4-hydroxyphenylacetate permease

Probab=99.89  E-value=1.3e-21  Score=181.57  Aligned_cols=291  Identities=11%  Similarity=0.119  Sum_probs=175.1

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      |....++.|++|+++|++++++++.+.++|.++++.+++.+.....                 ..+..|||+.|++.+++
T Consensus       115 ~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-----------------~~~~~gwr~~f~~~~~~  177 (412)
T TIGR02332       115 PGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDG-----------------LMALKGWQWLFLLEGFP  177 (412)
T ss_pred             HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----------------CCCccchhHHHHHHHHH
Confidence            5566789999999999999999999999999999999888751100                 01346899999997777


Q ss_pred             HHH-HHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCC-CCCCCCccccccchhhhhhhhhHHHHHHHH
Q 045073           83 AAL-TYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYP-VPVSPEASTYGLFSKEFVQKHGLHLLGTTS  160 (402)
Q Consensus        83 ~~~-~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (402)
                      +++ .++..+++||+|+..   +.-.+++.+...+..+.+.. +.++.+ ...+........+ +..++   +.++....
T Consensus       178 ~l~~~~~~~~~~~~~p~~~---~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~  249 (412)
T TIGR02332       178 SVILGVMTWFWLDDSPDKA---KWLDEEDKKALKEMIDNDQL-TLEQPEGAFAHAAMPQRSML-REIFT---PAIMLYTL  249 (412)
T ss_pred             HHHHHHHHhhccCCCcccC---CCCCHHHHHHHHHHHHhccc-cccccccccccccccHHHHH-HHhcC---hHHHHHHH
Confidence            665 445556789998531   00001111111111111100 000000 0000000000011 11111   23455556


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhhc--CcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH-HHHH
Q 045073          161 TWFLLDIAFYTINLAQKDIYPAT--GIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ-LGGF  237 (402)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~-~~~~  237 (402)
                      ..++....++....|.|.++++.  |.+..+.+.            ......++.++|.++.|+++||++||+.. ....
T Consensus       250 ~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~------------~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~  317 (412)
T TIGR02332       250 AYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGL------------LAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPY  317 (412)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHH------------HhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHH
Confidence            66666677888889999999874  455554333            67777888999999999999999977643 3333


Q ss_pred             HHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHH
Q 045073          238 LLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISA  317 (402)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~  317 (402)
                      .+.+++. ++...    .                ........... ....+.....+..+....|.+|++.|+++.|+.+
T Consensus       318 ~~~~~~~-~~~~~----~----------------~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~  375 (412)
T TIGR02332       318 LFAAAGW-LLASA----T----------------DHNLIQLLGII-MASMGSFSAMAIFWTTPDQSISLQARAIAIAVIN  375 (412)
T ss_pred             HHHHHHH-HHHHh----c----------------CCHHHHHHHHH-HHHHHhhhhhhHHHhhcccccchHHHHHHHHHHH
Confidence            3333322 11111    0                11111111111 1111122223344555678899999999999999


Q ss_pred             HHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHH
Q 045073          318 AAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVN  353 (402)
Q Consensus       318 ~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  353 (402)
                      ..+++|++++|.+.+.+.+..+ +|...+++.+++.
T Consensus       376 ~~~~~g~~~~p~~~g~i~~~~g-~~~~~~~~~~~~~  410 (412)
T TIGR02332       376 ATGNIGSALSPFLIGILKDATG-SFNSGLWFVAALL  410 (412)
T ss_pred             HhhhhhhhhhhhhcccccccCC-CCchhHHHHHHHH
Confidence            9999999999999999998764 5777777766544

This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.

>PRK15075 citrate-proton symporter; Provisional

Probab=99.89  E-value=2.3e-21  Score=181.55  Aligned_cols=259  Identities=15%  Similarity=0.153  Sum_probs=157.6

Q ss_pred             CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073            2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV   81 (402)
Q Consensus         2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i   81 (402)
                      ++....+++|++|+++|++++++...+..+|..+++.++..+.....+.               ..+.+|||++|+++.+
T Consensus       135 ~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~---------------~~~~~gWr~~f~~~~~  199 (434)
T PRK15075        135 LGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPA---------------QMAEWGWRIPFLIGCL  199 (434)
T ss_pred             HHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH---------------HHhccchHHHHHHHHH
Confidence            4556789999999999999999999999999999888888775322110               0145789999998665


Q ss_pred             HHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073           82 PAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST  161 (402)
Q Consensus        82 ~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (402)
                      ..++.++.....||++++..  ++++                          +   +..+.++ .. +++++........
T Consensus       200 ~~~~~~~~~~~~~e~~~~~~--~~~~--------------------------~---~~~~~~~-~~-~~~~~~~~~~~~~  246 (434)
T PRK15075        200 IVPFIFLIRRSLEETEEFLA--RKHR--------------------------P---SMREIFR-SL-AANWRIVLAGMLM  246 (434)
T ss_pred             HHHHHHHHHHhcCCCHHHHH--hhhc--------------------------c---ccccHHH-HH-HHhHHHHHHHHHH
Confidence            54444444444566543310  0000                          0   0001111 11 1111222222333


Q ss_pred             HHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHH
Q 045073          162 WFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM  240 (402)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~  240 (402)
                      .+.....++....|.|.++++ .|++..+.+.            ......++.+++.++.|+++||+|||+.+..+..+.
T Consensus       247 ~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~------------~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~  314 (434)
T PRK15075        247 VAMTTVSFYLITVYTPTFGKTVLHLSAADSLL------------VTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLA  314 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence            334455677788889999876 7888765443            566677778888999999999999999887765443


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHH
Q 045073          241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAG  320 (402)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~  320 (402)
                      .+..........  . .              ...........+. +.......+..+.+..|.+|++.|+++.++.+..+
T Consensus       315 ~~~~~~~~~~~~--~-~--------------~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~  376 (434)
T PRK15075        315 ILTAYPALSWLV--A-A--------------PSFARMLAVELWL-SFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLA  376 (434)
T ss_pred             HHHHHHHHHHHH--c-C--------------CchHHHHHHHHHH-HHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHH
Confidence            322111111110  0 1              1111111111111 11112223345567899999999999999976666


Q ss_pred             HH-hHHHHhHhHHhhhhcc
Q 045073          321 KA-GAIVGAFGVQYYTQKG  338 (402)
Q Consensus       321 ~~-g~~i~~~~~~~~~~~~  338 (402)
                      .. ++.++|.+.+.+.+..
T Consensus       377 ~~~~g~~~p~~~g~i~~~~  395 (434)
T PRK15075        377 TAIFGGFTPAISTWLIHVT  395 (434)
T ss_pred             HHHHhhhHHHHHHHHHHhc
Confidence            54 5788999999999877

>PRK10489 enterobactin exporter EntS; Provisional

Probab=99.88  E-value=2.5e-21  Score=180.59  Aligned_cols=282  Identities=9%  Similarity=0.007  Sum_probs=183.5

Q ss_pred             cchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHH
Q 045073            4 LSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPA   83 (402)
Q Consensus         4 ~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~   83 (402)
                      ...+++.|+.|+++|+++.++...+..+|..+++.+++.+.                       +..+||+.+++.++..
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~-----------------------~~~~~~~~~~~~~~~~  186 (417)
T PRK10489        130 ALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLI-----------------------AAGGVAWNYGLAAAGT  186 (417)
T ss_pred             HHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHH-----------------------HHHhhHHHHHHHHHHH
Confidence            34567889999999999999999999999999999999886                       4467999999877777


Q ss_pred             HHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHHH
Q 045073           84 ALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWF  163 (402)
Q Consensus        84 ~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (402)
                      ++..+..+.+||+++..    +++++..++..                         +.++. .++++  .+.......+
T Consensus       187 ~~~~~~~~~l~~~~~~~----~~~~~~~~~~~-------------------------~~~~~-~~~~~--~~~~~~~~~~  234 (417)
T PRK10489        187 FITLLPLLRLPALPPPP----QPREHPLRSLL-------------------------AGFRF-LLASP--VVGGIALLGG  234 (417)
T ss_pred             HHHHHHHHhCCCCCCCC----cccccchHHHH-------------------------HHHHH-HHcCh--HHHHHHHHHH
Confidence            76666666788765321    10000000000                         00011 11111  1111111111


Q ss_pred             HHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHH
Q 045073          164 LLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSI  242 (402)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~  242 (402)
                      ... ...+...+.|.+.++ .|.++...+.            ......++.+++.++.+++.||.++++.+..+..+.++
T Consensus       235 ~~~-~~~~~~~~~p~~~~~~~g~~~~~~g~------------~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~  301 (417)
T PRK10489        235 LLT-MASAVRVLYPALADEVWQMGAAQIGL------------LYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFL  301 (417)
T ss_pred             HHH-HHHhHHHhhHHHHHhccCCChhHhHH------------HHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHH
Confidence            111 123455677888877 7887765554            56667788889999999999998877777777665555


Q ss_pred             HHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHH
Q 045073          243 CMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKA  322 (402)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~  322 (402)
                      +.+++...                     . ......+..+..+.+.....+...++..|..|++.|+++.|+.+....+
T Consensus       302 ~~~~~~~~---------------------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~  359 (417)
T PRK10489        302 AVGLFGLM---------------------P-MWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVT  359 (417)
T ss_pred             HHHHHHcc---------------------c-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhh
Confidence            54443321                     1 1222222222222222222334567788999999999999999999999


Q ss_pred             hHHHHhHhHHhhhhccCCcchhhHHHHHHHHHH-HhhheeeeeccCCccccccccc
Q 045073          323 GAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFL-GFLCSFMVPETNGLSLEELSGE  377 (402)
Q Consensus       323 g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~i~~~~~~et~~~~~~~~~~~  377 (402)
                      |..+++.+.+.+.+..  +....+.+.+++.++ +.+....++++|+++.+|.+++
T Consensus       360 g~~~g~~l~G~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (417)
T PRK10489        360 GDAIGAALLGGLGAMM--TPVASASASGFGLLIIGVLLLLVLGELRRFRQTPPEVD  413 (417)
T ss_pred             hHhHHHHHHHHHHHHh--chhhHHHHHHHHHHHHHHHHHHhcccccccccccccCC
Confidence            9999999999999987  677777766665554 4444455689888887776554

>TIGR00891 2A0112 putative sialic acid transporter

Probab=99.88  E-value=6.3e-21  Score=177.28  Aligned_cols=281  Identities=13%  Similarity=0.100  Sum_probs=172.4

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      +...+++.|++|+++|+++.++.+.+..+|.++++.++..+...                     ...+||+.|++.+++
T Consensus       119 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~---------------------~~~~w~~~f~~~~~~  177 (405)
T TIGR00891       119 GSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPV---------------------WGDGWRALFFISILP  177 (405)
T ss_pred             HHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------------cCccHHHHHHHHHHH
Confidence            45678899999999999999999999999999999998887621                     123599999988877


Q ss_pred             HHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073           83 AALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW  162 (402)
Q Consensus        83 ~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (402)
                      .++.++....+||+|++... ++++++..+...+..+.+... .       ...+......+.. .++.+..+.......
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  247 (405)
T TIGR00891       178 IIFALWLRKNIPEAEDWKEK-HAGKALVRTMVDILYGGEHRI-A-------NIVMTLAAAMVQS-AGKRWPTFVYLVVLV  247 (405)
T ss_pred             HHHHHHHHHhCCCChhHHHH-hhhhhhhhhHHHHHhccchhh-h-------hhhhhhhHHhhhh-hhhhhHHHHHHHHHH
Confidence            77777777778998876321 111111111111111100000 0       0000000000111 111112222222223


Q ss_pred             HHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHH
Q 045073          163 FLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMS  241 (402)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~  241 (402)
                      ............+.|.++. +.|++..+.+.            ......++.+++.++.+++.||+|||+.+..+.....
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~------------~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~  315 (405)
T TIGR00891       248 LFANLYSHPIQDLLPTYLKADLGLSPHTVAN------------IVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQ  315 (405)
T ss_pred             HHHHHHHhhhhhhhHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHH
Confidence            3333334455556677764 47888776554            5667778889999999999999999998887765443


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHH
Q 045073          242 ICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGK  321 (402)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~  321 (402)
                      +..+.....    .                .+. ....+.....++...+..+....+..|.+|++.|+++.|+.+....
T Consensus       316 ~~~~~~~~~----~----------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  374 (405)
T TIGR00891       316 LLIIPVFAI----G----------------ANV-AVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGN  374 (405)
T ss_pred             HHHHHHHHh----C----------------Cch-HHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHH
Confidence            322221111    0                111 2222221222233334445666788999999999999999999999


Q ss_pred             HhHHHHhHhHHhhhhccCCcchhhHHH
Q 045073          322 AGAIVGAFGVQYYTQKGDKQIKQSIIT  348 (402)
Q Consensus       322 ~g~~i~~~~~~~~~~~~~~~~~~~~~~  348 (402)
                      ++..++|.+.+.+.+..+ .+...+..
T Consensus       375 ~g~~~g~~~~g~l~~~~g-~~~~~~~~  400 (405)
T TIGR00891       375 LGGALAPIIGALLAQRLD-EYGTALAS  400 (405)
T ss_pred             HHHHHHHHHHHHHHHhcc-ccchhHHh
Confidence            999999999999999873 25554443

>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional

Probab=99.88  E-value=4.9e-21  Score=180.19  Aligned_cols=289  Identities=16%  Similarity=0.135  Sum_probs=170.7

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHH-HHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGIL-FAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV   81 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i   81 (402)
                      |.....+.|++|+++|++++++++.+..+|.. .+++++..+.                       ...+||+.|++.++
T Consensus       139 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~-----------------------~~~gw~~~f~i~~~  195 (452)
T PRK11273        139 PPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMA-----------------------WFNDWHAALYMPAF  195 (452)
T ss_pred             hHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH-----------------------HhccHHHHHHHHHH
Confidence            44567788999999999999999999998864 4555443332                       22489999998666


Q ss_pred             HHHH-HHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHH
Q 045073           82 PAAL-TYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTS  160 (402)
Q Consensus        82 ~~~~-~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (402)
                      +.++ .++..+++||+|+....  .++++.    .+    +..++.++   .++++....+.+.+...++  +.++...+
T Consensus       196 ~~~~~~~l~~~~~~~~~~~~~~--~~~~~~----~~----~~~~~~~~---~~~~~~~~~~~~~~~~~~~--~~~~~~~l  260 (452)
T PRK11273        196 AAILVALFAFAMMRDTPQSCGL--PPIEEY----KN----DYPDDYNE---KHEQELTAKQIFMQYVLPN--KLLWYIAI  260 (452)
T ss_pred             HHHHHHHHHHHHccCCHhhcCC--CChhhh----hh----cccccccc---ccCCCccHHHHHHHHHHcC--hHHHHHHH
Confidence            5555 45556678998764211  111110    00    00000000   0000111112222212222  24455555


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhcc--chhHHHHH-H
Q 045073          161 TWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRI--GRFIIQLG-G  236 (402)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~--grr~~~~~-~  236 (402)
                      ..+......++...+.|.++++ .|++..+.+.            ......++.+++.++.|+++||+  +||..... .
T Consensus       261 ~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~------------~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~  328 (452)
T PRK11273        261 ANVFVYLLRYGILDWSPTYLKEVKHFALDKSSW------------AYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFF  328 (452)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHH
Confidence            5555555667778899999976 6787665443            55566777888899999999999  55543222 2


Q ss_pred             HHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHH
Q 045073          237 FLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGIS  316 (402)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~  316 (402)
                      ..+..++.+.+...     ..              .+.....+ .....+....+.......+..|.+|++.|+++.|+.
T Consensus       329 ~~l~~~~~~~~~~~-----~~--------------~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~  388 (452)
T PRK11273        329 MTLVTIATIVYWLN-----PA--------------GNPTVDMA-CMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFT  388 (452)
T ss_pred             HHHHHHHHHHHHHh-----cc--------------cChHHHHH-HHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHH
Confidence            22222222211111     00              11111111 111112212222222334567999999999999999


Q ss_pred             HHHHHHhHHH-HhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073          317 AAAGKAGAIV-GAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV  363 (402)
Q Consensus       317 ~~~~~~g~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~  363 (402)
                      +....+|+.+ +|.+.+.+.+..  +++..|++.+++++++++....+
T Consensus       389 ~~~~~~g~~~~g~~v~g~l~~~~--g~~~~f~~~~~~~~~~~~~~~~~  434 (452)
T PRK11273        389 GLFGYLGGSVAASAIVGYTVDFF--GWDGGFMVMIGGSILAVILLIVV  434 (452)
T ss_pred             HHHHHHHHHHhhhhhHHHHHHHh--cchHHHHHHHHHHHHHHHHHHHH
Confidence            9998888765 799999999988  88899988888888887776654

>PRK09556 uhpT sugar phosphate antiporter; Reviewed

Probab=99.87  E-value=1.2e-21  Score=185.02  Aligned_cols=294  Identities=14%  Similarity=0.109  Sum_probs=181.3

Q ss_pred             CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073            2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV   81 (402)
Q Consensus         2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i   81 (402)
                      +|....+++|++|+++||+++++++.+.++|.++++.+...+....                    ...+||..|.+.++
T Consensus       140 ~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~--------------------~~~~~~~~f~~~g~  199 (467)
T PRK09556        140 GPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYF--------------------FDGHVIGMFIFPSI  199 (467)
T ss_pred             chHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhh--------------------ccCcchhHHHHHHH
Confidence            4566789999999999999999999999999999998876654210                    11259998888665


Q ss_pred             HHHH-HHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHH
Q 045073           82 PAAL-TYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTS  160 (402)
Q Consensus        82 ~~~~-~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (402)
                      ++++ .++..++.+|+|+...  ..+.++   ..    ++...++.++   .++++....+.+.+...++  +.++...+
T Consensus       200 ~~~~~~i~~~~~~~~~p~~~~--~~~~~~---~~----~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~--~~~~~~~~  265 (467)
T PRK09556        200 IALIIGFIGLRYGSDSPEELG--WGKAEE---IF----GEPISEEDKE---TESTDMTKWQIFVEYVLKN--PVIWLLCF  265 (467)
T ss_pred             HHHHHHHHHHHhCCCChhhcC--CCChhh---cc----cCccchhhhc---cccccCcHHHHHHHHHHcC--hHHHHHHH
Confidence            5554 4444555677764310  011111   00    0000000000   0000001111111112222  24555666


Q ss_pred             HHHHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHH
Q 045073          161 TWFLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL  239 (402)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~  239 (402)
                      ..++....+++...|.|.+++ .+|++..+.+.            ......++.+++.+++|+++||+|||+.+.....+
T Consensus       266 ~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~------------~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~  333 (467)
T PRK09556        266 ANIFLYIVRIGIDNWSPVYAFQELGFSKEDAIN------------TFTLFEIGALVGSLLWGWLSDLANGRRALVACIAL  333 (467)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHH
Confidence            666666677788889998885 48888876554            56667778899999999999999998876654433


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH
Q 045073          240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA  319 (402)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~  319 (402)
                      ..++..++....                    ........+..+..+....+..........|.+|++.|+++.|+.+..
T Consensus       334 ~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~  393 (467)
T PRK09556        334 ALIIFTLGVYQH--------------------ATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTF  393 (467)
T ss_pred             HHHHHHHHHHHh--------------------cCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHH
Confidence            333222222110                    111122222222222222232222235567999999999999999999


Q ss_pred             HHH-hHHHHhHhHHhhhh------------ccCCcchhhHHHHHHHHHHHhhheeee
Q 045073          320 GKA-GAIVGAFGVQYYTQ------------KGDKQIKQSIITLAVVNFLGFLCSFMV  363 (402)
Q Consensus       320 ~~~-g~~i~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~i~~i~~~~~  363 (402)
                      +++ |.+++|.+.|.+.+            ..  +|...|.+.+++.+++.+..+++
T Consensus       394 g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~--~~~~~f~~~~~~~~~~~~~~~~~  448 (467)
T PRK09556        394 AYLFGDSFAKVGLGMIADPTKNGTPIFGYTLT--GWAGTFAALDIAAIGCICLMAIV  448 (467)
T ss_pred             HHHHhHHHHhhhHHHHhccccccccccccccc--ChHHHHHHHHHHHHHHHHHHHHH
Confidence            997 77899999999998            33  78899988888888877666644

>TIGR00895 2A0115 benzoate transport

Probab=99.87  E-value=9.7e-21  Score=175.54  Aligned_cols=274  Identities=21%  Similarity=0.276  Sum_probs=169.4

Q ss_pred             CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073            2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV   81 (402)
Q Consensus         2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i   81 (402)
                      ++...+++.|++|+++|++++++...+..+|..+++.+++.+.                       +..+||+.+++.++
T Consensus       123 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~-----------------------~~~g~~~~~~~~~~  179 (398)
T TIGR00895       123 MPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLI-----------------------PVFGWRSLFYVGGI  179 (398)
T ss_pred             hhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHh-----------------------hcccceeehhhhhh
Confidence            3566789999999999999999999999999999999998876                       56789999998754


Q ss_pred             -HHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHH
Q 045073           82 -PAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTS  160 (402)
Q Consensus        82 -~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (402)
                       ..+..++...++||+|++...  +++++..+...+......+++.++..+.+.+++...+..+....++..+..+....
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (398)
T TIGR00895       180 APLLLLLLLMRFLPESIDFLVS--KRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWL  257 (398)
T ss_pred             HHHHHHHHHHHhCCCCChHHHh--cCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHH
Confidence             444455556678999877432  22222222222221111111111111100100111111111111122223333444


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHH
Q 045073          161 TWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM  240 (402)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~  240 (402)
                      ..+......+....+.|.+.++.|.+....+.            ......++.+++.++.++++||+|||+..... .+.
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~  324 (398)
T TIGR00895       258 LYFMLLVGVYFLTNWLPKLMVELGFSLSLAAT------------GGALFNFGGVIGSIIFGWLADRLGPRVTALLL-LLG  324 (398)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHhhcchHHHHHHH-HHH
Confidence            44455556667777888777888888776544            66677788899999999999999999544433 333


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHH
Q 045073          241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAG  320 (402)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~  320 (402)
                      ++...++....                    .+...... ..+..+.......+..+++..|.+|++.|+++.|+.+...
T Consensus       325 ~~~~~~~~~~~--------------------~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~  383 (398)
T TIGR00895       325 AVFAVLVGSTL--------------------FSPTLLLL-LGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIG  383 (398)
T ss_pred             HHHHHHHHHHh--------------------hCHHHHHH-HHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH
Confidence            33322222211                    11222222 2222233233344567788999999999999999999999


Q ss_pred             HHhHHHHhHhHHhh
Q 045073          321 KAGAIVGAFGVQYY  334 (402)
Q Consensus       321 ~~g~~i~~~~~~~~  334 (402)
                      .+|..++|.+.+.+
T Consensus       384 ~~g~~~g~~~~G~l  397 (398)
T TIGR00895       384 RLGAIIGPILAGYL  397 (398)
T ss_pred             HHHHHHHHHhHHhc
Confidence            99999999988865

>PRK03893 putative sialic acid transporter; Provisional

Probab=99.87  E-value=8.3e-21  Score=181.28  Aligned_cols=292  Identities=14%  Similarity=0.117  Sum_probs=171.1

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      +....++.|++|+++|+++.++...+..+|..+++.+++.+.                       +..+||+.|++.+++
T Consensus       127 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~-----------------------~~~~w~~~f~~~~~~  183 (496)
T PRK03893        127 GSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVV-----------------------PVWGWRALFFIGILP  183 (496)
T ss_pred             HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------------------ccCCHHHHHHHHHHH
Confidence            345678999999999999999999999999999999998876                       567999999987766


Q ss_pred             HHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCC----------CCCCCCCccccc-----------
Q 045073           83 AALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAY----------PVPVSPEASTYG-----------  141 (402)
Q Consensus        83 ~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~-----------  141 (402)
                      .++.++....+||++++...+ +++++ .++..+....+........          ..........+.           
T Consensus       184 ~~~~~~~~~~~p~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (496)
T PRK03893        184 IIFALWLRKNLPEAEDWKEKH-AGKAP-VRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAI  261 (496)
T ss_pred             HHHHHHHHHhCCCchhhhhhc-ccccc-chhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHH
Confidence            666666666788887653211 11110 0000000000000000000          000000000000           


Q ss_pred             --cchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhh
Q 045073          142 --LFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYW  218 (402)
Q Consensus       142 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  218 (402)
                        .+......+.+..........+......+....+.|.+++ +.|++..+.+.            ......++.+++.+
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~------------~~~~~~~~~~~g~~  329 (496)
T PRK03893        262 FISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVAN------------VLFFSGFGAAVGCC  329 (496)
T ss_pred             HHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHH------------HHHHHHHHHHHHHH
Confidence              0000000000001111111111111112234567788884 78888876555            66777888889999


Q ss_pred             hHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccc
Q 045073          219 FTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFI  298 (402)
Q Consensus       219 ~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (402)
                      +.|+++||+|||+.+..+..+..+..+.+....                    ...............+...+..+....
T Consensus       330 ~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~  389 (496)
T PRK03893        330 VGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIG--------------------GANVWVLGLLLFFQQMLGQGISGLLPK  389 (496)
T ss_pred             HHHHHHHHhcchHHHHHHHHHHHHHHHHHhhcc--------------------ccHHHHHHHHHHHHHHHhcccchhhHH
Confidence            999999999999988877655444433222210                    111122222222222223334445666


Q ss_pred             ccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHH
Q 045073          299 VPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVN  353 (402)
Q Consensus       299 ~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  353 (402)
                      ++.|.+|++.|++++|+.+....+|+.++|.+.+.+.+..  ++...+...++..
T Consensus       390 ~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~--g~~~~~~~~~~~~  442 (496)
T PRK03893        390 LIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRL--DLGTALASLSFSL  442 (496)
T ss_pred             HHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccC--ChHHHHHHHHHHH
Confidence            7899999999999999999999999999999999999887  7776665544433

>TIGR00883 2A0106 metabolite-proton symporter

Probab=99.87  E-value=2.2e-20  Score=172.84  Aligned_cols=276  Identities=18%  Similarity=0.172  Sum_probs=174.1

Q ss_pred             CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073            2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV   81 (402)
Q Consensus         2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i   81 (402)
                      ++....++.|++|+++|+++.++.+.+..+|.++++.++..+.......               ....++||+.|++.++
T Consensus       114 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~---------------~~~~~~w~~~~~~~~~  178 (394)
T TIGR00883       114 WGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDD---------------ALLEWGWRIPFLVSAV  178 (394)
T ss_pred             ccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH---------------HhhccchHHHHHHHHH
Confidence            4567889999999999999999999999999999999887765322110               1145789999999877


Q ss_pred             HHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073           82 PAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST  161 (402)
Q Consensus        82 ~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (402)
                      ..++..+....+||+|++...  +++++                        +.+..     .....+++++.++.....
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------------~~~~~-----~~~~~~~~~~~~~~~~~~  227 (394)
T TIGR00883       179 LVLIGLYLRRNLEETPVFEKA--QEKHK------------------------KKRGP-----IRETLTKHRKPFLLGLGL  227 (394)
T ss_pred             HHHHHHHHHHhcCCChhHHHH--Hhccc------------------------cccCC-----HHHHHHhchHHHHHHHHH
Confidence            777766666667887754211  00000                        00001     111122222234444445


Q ss_pred             HHHHHHHHHHHHhhhhhhh-hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHH
Q 045073          162 WFLLDIAFYTINLAQKDIY-PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM  240 (402)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~  240 (402)
                      .+......+....+.|.+. ++.|.+..+.+.            ......+..+++.++.++++||+|||+.+.....+.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~  295 (394)
T TIGR00883       228 VIATTTTFYLITTYLPTYLTQTLGLSANSALL------------VLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLA  295 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCChhHHHH------------HHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHH
Confidence            5555556667777888888 457777665443            556667778888889999999999999877554443


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHH-HH
Q 045073          241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISA-AA  319 (402)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~-~~  319 (402)
                      .+..........  .                ..............++......+...++..|.+|++.|+++.++.. ..
T Consensus       296 ~~~~~~~~~~~~--~----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  357 (394)
T TIGR00883       296 ALLAVPLLMALL--D----------------SGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLA  357 (394)
T ss_pred             HHHHHHHHHHHh--c----------------CCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhH
Confidence            332211111110  0                1111222222222222233344567788899999999999999854 44


Q ss_pred             HHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHH
Q 045073          320 GKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNF  354 (402)
Q Consensus       320 ~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (402)
                      ..+|..++|.+.+.+.+..+ .+...++..+++.+
T Consensus       358 ~~~g~~~~p~~~g~l~~~~g-~~~~~~~~~~~~~l  391 (394)
T TIGR00883       358 GAIFGGFAPYIAAALVAMTG-DWYAIGYYLAALAL  391 (394)
T ss_pred             HHHHhhHHHHHHHHHHHHcC-cchhHHHHHHHHHH
Confidence            56788899999999998773 26555555544443

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.

>TIGR00893 2A0114 d-galactonate transporter

Probab=99.87  E-value=2.1e-20  Score=173.12  Aligned_cols=291  Identities=13%  Similarity=0.125  Sum_probs=178.4

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      +....++.|++|+++|++++++.+.+..+|.++++.+++.+.                       ...+||+.|++.++.
T Consensus       101 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~-----------------------~~~~~~~~~~~~~~~  157 (399)
T TIGR00893       101 PGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWIL-----------------------IHFSWQWAFIIEGVL  157 (399)
T ss_pred             hHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHH-----------------------HhCCchHHHHHHHHH
Confidence            556789999999999999999999999999999999998876                       557899999987766


Q ss_pred             HHHHHH-HHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073           83 AALTYY-WRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST  161 (402)
Q Consensus        83 ~~~~~~-~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (402)
                      .++..+ ..+++||+|+..   +...+++.+...+....    +.++.    ++++..++.+++..++   +.++.....
T Consensus       158 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~----~~~~~----~~~~~~~~~~~~~~~~---~~~~~~~~~  223 (399)
T TIGR00893       158 GIIWGVLWLKFIPDPPQKA---KWLTEEEKYIVVGGLLA----EQQGK----GPSTPKKYQIKELLKD---RRVWGLALG  223 (399)
T ss_pred             HHHHHHHhhheecCCCCcc---ccCCHHHHhhcchhhcc----ccccc----cccCCCccchHHHhcC---HHHHHHHHH
Confidence            665444 444567765421   11111111100000000    00000    0001111111121111   234444555


Q ss_pred             HHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHH-HHHH
Q 045073          162 WFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLG-GFLL  239 (402)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~-~~~~  239 (402)
                      .+......+....+.|.++++ .|.+..+.+.            ......++.+++.++.+++.||++||+.... ....
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  291 (399)
T TIGR00893       224 QFLVNIGLGFFLTWFPTYLVQERGLSILEAGF------------MASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKT  291 (399)
T ss_pred             HHHHHhHHHHHHHHHHHHHHHHhcccHHHhhH------------HHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHH
Confidence            555556666777788888754 6777665444            6667778888999999999999999962111 1111


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH
Q 045073          240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA  319 (402)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~  319 (402)
                      ..++.+............              ... ......... .+...+..+..+++..|.+|++.|+++.|+.+..
T Consensus       292 ~~~~~~~~~~~~~~~~~~--------------~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  355 (399)
T TIGR00893       292 AIIAGLVLSLLMFATNYV--------------NIP-YAALALVAL-GFFGLGAGAIGWALISDNAPGNIAGLTGGLINSL  355 (399)
T ss_pred             HHHHHHHHHHHHHHhccc--------------hhH-HHHHHHHHH-HHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHH
Confidence            111111111111000000              111 222222222 2223335677888999999999999999999999


Q ss_pred             HHHhHHHHhHhHHhhhhccCCc-chhhHHHHHHHHHHHhhhe
Q 045073          320 GKAGAIVGAFGVQYYTQKGDKQ-IKQSIITLAVVNFLGFLCS  360 (402)
Q Consensus       320 ~~~g~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~  360 (402)
                      ..+|..++|.+.+.+.+..  + +...+.+.+++.+++.+..
T Consensus       356 ~~~g~~~~~~i~g~l~~~~--g~~~~~~~~~~~~~~~~~~~~  395 (399)
T TIGR00893       356 GNLGGIVGPIVIGAIAATT--GSFAGALMVVAALALIGALSY  395 (399)
T ss_pred             HHHhhhhhhHHhhhhccCC--CchhHHHHHHHHHHHHHHHHH
Confidence            9999999999999999877  5 7888888777777665544

>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter

Probab=99.87  E-value=6.1e-20  Score=173.67  Aligned_cols=291  Identities=12%  Similarity=0.078  Sum_probs=180.6

Q ss_pred             CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCC-chhHHHHHHhH
Q 045073            2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGD-YLWRIVLMFGA   80 (402)
Q Consensus         2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Wr~~f~~~~   80 (402)
                      +|....++.|++|+++|++++++...+..+|.++++.+++.+.                       .. .+||+.|++.+
T Consensus       149 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~-----------------------~~~~gw~~~f~i~~  205 (465)
T TIGR00894       149 SPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLC-----------------------ESWGGWPMIFYVFG  205 (465)
T ss_pred             hhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------hccCCCCeehhhhh
Confidence            4567889999999999999999999999999999999998876                       44 48999999977


Q ss_pred             HHHHHHHHH-HhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHH
Q 045073           81 VPAALTYYW-RMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTT  159 (402)
Q Consensus        81 i~~~~~~~~-~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (402)
                      +++++..+. ..+.+|+|+..   ++..+++.+...+.    .+++.++     .+   ....++. ..++  +.++...
T Consensus       206 ~~~~~~~~~~~~~~~~~p~~~---~~~~~~~~~~i~~~----~~~~~~~-----~~---~~~~~~~-~~~~--~~~~~~~  267 (465)
T TIGR00894       206 IVGCAWSLLWFVFPADDPSIH---PCISKFEKKYINSS----LQGQKGS-----TR---QSLPIKA-IPKS--LPVWAIW  267 (465)
T ss_pred             HHHHHHHHHHHHHhcCCcccC---CCCCHHHHHHHHhh----cccccCC-----CC---CCCCHHH-HhcC--HHHHHHH
Confidence            777665444 44467887541   11111111111110    0000000     00   0011122 2222  2456666


Q ss_pred             HHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH-----
Q 045073          160 STWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ-----  233 (402)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~-----  233 (402)
                      +..++.....+....|+|.++++ +|++..+.+.            ......++.+++.+++|+++||+++|+..     
T Consensus       268 ~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~------------~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~  335 (465)
T TIGR00894       268 FAIFGHFWLYTILPTYLPTFISWVLRVSGKENGL------------LSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAA  335 (465)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHH------------HHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHH
Confidence            66777777888888899999865 7888776554            66677888889999999999998654211     


Q ss_pred             ---HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhh
Q 045073          234 ---LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRS  310 (402)
Q Consensus       234 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~  310 (402)
                         ..+......+...+....  ..                ......+..+.+. ++...+..+..+....|..|. .+|
T Consensus       336 ~~~~~~~~~~~~~~~~~~~~~--~~----------------~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~-~~g  395 (465)
T TIGR00894       336 RKIFNGIGGLGPGIFAYALPY--LS----------------AAFYLTIIILTLA-NAVSSGPLAGVLINSLDLAPR-FLG  395 (465)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH--cC----------------CchHHHHHHHHHH-HHHhhhhhhhhhhchhhcChh-HHH
Confidence               111111111111111111  00                1111222222222 222222333444455677665 899


Q ss_pred             hhhhHHHHHHHHhHHHHhHhHHhhhhccCC-cchhhHHHHHHHHHHHhhheeeeec
Q 045073          311 TCHGISAAAGKAGAIVGAFGVQYYTQKGDK-QIKQSIITLAVVNFLGFLCSFMVPE  365 (402)
Q Consensus       311 ~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~~~~~e  365 (402)
                      ++.++.+..+.++++++|.+.+.+.+..+. +|...|.+.++..+++.++..+.+.
T Consensus       396 ~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~  451 (465)
T TIGR00894       396 FIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIFGS  451 (465)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeeeec
Confidence            999999999999999999999988764311 4778888888888888877766543

>PRK03545 putative arabinose transporter; Provisional

Probab=99.87  E-value=5.4e-20  Score=170.06  Aligned_cols=262  Identities=11%  Similarity=0.098  Sum_probs=169.3

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      +...+++.|++|+++|++++++...+..+|.++++.+++.+.                       +..|||+.|++.++.
T Consensus       116 ~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~-----------------------~~~gw~~~f~~~~~~  172 (390)
T PRK03545        116 SITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIG-----------------------QYLGWRTTFLAIGGG  172 (390)
T ss_pred             HHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHH-----------------------HHhcHHHHHHHHHHH
Confidence            455688999999999999999999999999999999998876                       557899999997776


Q ss_pred             HHHHH-HHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073           83 AALTY-YWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST  161 (402)
Q Consensus        83 ~~~~~-~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (402)
                      +++.. +...++||.|+.    +++.   .+.                              .....+++  .++.....
T Consensus       173 ~~l~~~~~~~~~~~~~~~----~~~~---~~~------------------------------~~~~~~~~--~~~~~~~~  213 (390)
T PRK03545        173 ALITLLLLIKLLPLLPSE----HSGS---LKS------------------------------LPLLFRRP--ALVSLYLL  213 (390)
T ss_pred             HHHHHHHHHHhCCCCCCC----Ccch---HHH------------------------------HHHHHhCc--HHHHHHHH
Confidence            66544 334456765421    1100   000                              01111111  11222222


Q ss_pred             HHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHH
Q 045073          162 WFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM  240 (402)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~  240 (402)
                      .+......+....+.+.++++ .|.+..+.+.            ......++.+++.++.+++.||++||.... +..+.
T Consensus       214 ~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~------------~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~  280 (390)
T PRK03545        214 TVVVVTAHFTAYSYIEPFVQQVAGLSENFATL------------LLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALL  280 (390)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCccHHHH------------HHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHH
Confidence            222223333444555656554 6777765444            566677788999999999999999886544 33333


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHH
Q 045073          241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAG  320 (402)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~  320 (402)
                      .++...+...                     .+......+..+..+.......+.......+..| +.|+++.|+.+...
T Consensus       281 ~~~~~~l~~~---------------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~  338 (390)
T PRK03545        281 LVCLLLLLPA---------------------ANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIF  338 (390)
T ss_pred             HHHHHHHHHH---------------------hchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHH
Confidence            3333222211                     1111222223333333333333445556677766 57899999999999


Q ss_pred             HHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073          321 KAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV  363 (402)
Q Consensus       321 ~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~  363 (402)
                      ++|..+||.+.|.+.+..  +++..+.+.+++.+++.++.+..
T Consensus       339 ~~g~~~G~~~~G~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~  379 (390)
T PRK03545        339 NIGIGAGALLGNQVSLHL--GLSSIGYVGAALALAALVWSILI  379 (390)
T ss_pred             HHHHHHHHHHHHHHHhcc--ChhHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999988  88999999888888877776544

>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]

Probab=99.86  E-value=1.1e-19  Score=161.11  Aligned_cols=264  Identities=16%  Similarity=0.135  Sum_probs=180.9

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      +.+.++.++..|+++|++++++...+..++.++|..+|.++-                       +.+|||..|++.++.
T Consensus       120 ~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig-----------------------~~~GWR~~F~~ia~l  176 (394)
T COG2814         120 SIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLG-----------------------QLFGWRATFLAIAVL  176 (394)
T ss_pred             HHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHH-----------------------HHhhHHHHHHHHHHH
Confidence            456778899999999999999999999999999999999987                       779999999998777


Q ss_pred             HHHHHH-HHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073           83 AALTYY-WRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST  161 (402)
Q Consensus        83 ~~~~~~-~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (402)
                      +++.++ .+..+|  |+-  . .+..+...+                         +.    .+..+++   ..+.....
T Consensus       177 ~ll~~~~~~~~lP--~~~--~-~~~~~~~~~-------------------------~~----~~~l~~p---~v~~~l~~  219 (394)
T COG2814         177 ALLALLLLWKLLP--PSE--I-SGSLPGPLR-------------------------TL----LRLLRRP---GVLLGLLA  219 (394)
T ss_pred             HHHHHHHHHHhCC--Ccc--C-CCCCCcchh-------------------------HH----HHHhcCc---hHHHHHHH
Confidence            777554 455688  221  0 111100000                         00    1111122   33334444


Q ss_pred             HHHHHHHHHHHHhhhhhhh-hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHH
Q 045073          162 WFLLDIAFYTINLAQKDIY-PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM  240 (402)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~  240 (402)
                      .+....+.|....|...++ +..|++....+.            ....++++.++|+.++|++.|| +.|+.+.....+.
T Consensus       220 t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~------------~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~  286 (394)
T COG2814         220 TFLFMTGHFALYTYIRPFLESVAGFSVSAVSL------------VLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLL  286 (394)
T ss_pred             HHHHHcchhhhHHhHHHHHHHccCCCHhHHHH------------HHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHH
Confidence            4444445555555665555 457888876555            7788899999999999999999 8888888777777


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHH
Q 045073          241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAG  320 (402)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~  320 (402)
                      .+..+.+.+.                     .++...........++.............++ .-++.++.+.++.....
T Consensus       287 a~~~l~l~~~---------------------~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~  344 (394)
T COG2814         287 ALALLALTFT---------------------GASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAF  344 (394)
T ss_pred             HHHHHHHHHh---------------------cchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHH
Confidence            7666665553                     1222222222222222222222233333444 33578899999999999


Q ss_pred             HHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073          321 KAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV  363 (402)
Q Consensus       321 ~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~  363 (402)
                      ++|..+|..+.+.+.++.  ++....+..++..+++.++.+..
T Consensus       345 nlgia~GA~lGG~v~~~~--g~~~~~~~~a~l~~~a~~~~~~~  385 (394)
T COG2814         345 NLGIALGAALGGLVLDAL--GYAATGWVGAALLLLALLLALLS  385 (394)
T ss_pred             HHHHHHHHHHHHHHHHhh--chHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999987  88889999888888887776654

>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]

Probab=99.85  E-value=8.2e-20  Score=175.11  Aligned_cols=305  Identities=21%  Similarity=0.253  Sum_probs=197.7

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      .++..+++|+.++++|+.++.+ ......|..+++.+++++.                       .  +||+.+++..++
T Consensus       190 ~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~-----------------------~--~Wr~~~~~~~~~  243 (521)
T KOG0255|consen  190 TVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYIT-----------------------R--DWRWLFWIISIP  243 (521)
T ss_pred             HHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHH-----------------------h--hHHHHHHHHHHH
Confidence            4567889999999999999999 6666667777777776665                       2  799999999999


Q ss_pred             HHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhcccc-----ccccccC---CCC---CC-CCCccccccchhhhhhh
Q 045073           83 AALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTD-----LTVATSA---YPV---PV-SPEASTYGLFSKEFVQK  150 (402)
Q Consensus        83 ~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~---~~~---~~-~~~~~~~~~~~~~~~~~  150 (402)
                      +++.++.+++.||||||+.. +++.+++.+.+++..+.+     ..+..+.   .++   .. +++....++++.+..+ 
T Consensus       244 ~~~~~~~~~l~~Es~rwl~~-~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~-  321 (521)
T KOG0255|consen  244 SGLFLLLWFLPPESPRWLLS-KGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLR-  321 (521)
T ss_pred             HHHHHHHHHccCcChHHHHH-cCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHH-
Confidence            99887777777899999865 455566666666654322     1000000   000   00 1112234444444333 


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchh
Q 045073          151 HGLHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRF  230 (402)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr  230 (402)
                        +.++...+.++.....+|+.......    +|.+...               ..........++....+...|++|||
T Consensus       322 --~~~~~~~~~~~~~~~~y~gl~~~~~~----lg~~~~~---------------~~~~~~~~~~p~~~~~~~~~~~~gR~  380 (521)
T KOG0255|consen  322 --YRTLYLLFIWFVFSLVYYGLSLNVSG----LGGNIYL---------------NFTLSGLVELPAYFRNGLLLPEFGRR  380 (521)
T ss_pred             --HHHHHHHHHHHHHhHHHHhhhhhhhh----cCchHHH---------------HHHHHHHHHhhHHHHHHHHHHHhCcH
Confidence              35666666666667777776554433    3333221               23333336667777788999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhh
Q 045073          231 IIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRS  310 (402)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~  310 (402)
                      .....+.++..++++..++....                  ...+...++..+..++...+.. ..+.+.+|++|+..|.
T Consensus       381 ~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~el~pt~~r~  441 (521)
T KOG0255|consen  381 PPLFLSLFLAGIGLLLFGWLPDD------------------LGGWLHWILPLLGKFFIGSAFN-LIFLYSAELIPTVVRN  441 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcc------------------chhHHHHHHHHHHHHHHHHHHH-HHHHHHHhhccHHHHH
Confidence            99999999888888887775321                  1111223333333333344444 4588999999999999


Q ss_pred             hhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhe-eeeeccCCccccccccch
Q 045073          311 TCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCS-FMVPETNGLSLEELSGED  378 (402)
Q Consensus       311 ~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~-~~~~et~~~~~~~~~~~~  378 (402)
                      .+.+......+++++++|.+.......   .....+.+++....+...+. .++|||+++.+.+..++.
T Consensus       442 ~~~~~~~~~~~~~~i~ap~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l~~t~~~~  507 (521)
T KOG0255|consen  442 TAVGAISAAARLGSILAPLFPLLLRQM---FPLLGLILFGWLALLLGLLSLLLLPETKGKPLPGTLLDA  507 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhh---cccchHHHHHHHHHHHHHHHHhcCcccCCCCCchhHHHH
Confidence            999999999999999999877655542   22223333455555555444 677999999886554443

>PRK11010 ampG muropeptide transporter; Validated

Probab=99.85  E-value=2e-19  Score=170.23  Aligned_cols=276  Identities=12%  Similarity=0.045  Sum_probs=175.2

Q ss_pred             cchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCC-CchhHHHHHHhHHH
Q 045073            4 LSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQG-DYLWRIVLMFGAVP   82 (402)
Q Consensus         4 ~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Wr~~f~~~~i~   82 (402)
                      ...+++.|++|+++|+++.++...+..+|.++++.++..+.                       + ..|||..|++.++.
T Consensus       127 ~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~-----------------------~~~~GWr~~f~i~a~l  183 (491)
T PRK11010        127 VFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLA-----------------------DRYLGWQGMYWLMAAL  183 (491)
T ss_pred             HHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------hcccCHHHHHHHHHHH
Confidence            35678899999999999999999999999999999988886                       4 46999999997777


Q ss_pred             HHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073           83 AALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW  162 (402)
Q Consensus        83 ~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (402)
                      .++..+..+++||+++..   +++++.. +.                         ..+.+++ ..+++.  .+......
T Consensus       184 ~ll~~l~~~~~~e~~~~~---~~~~~~~-~~-------------------------~~~~l~~-~~~~~~--~~~~ll~~  231 (491)
T PRK11010        184 LIPCIIATLLAPEPTDTI---PVPKTLE-QA-------------------------VVAPLRD-FFGRNN--AWLILLLI  231 (491)
T ss_pred             HHHHHHHHHhcCCCcccc---ccccchh-hh-------------------------HHHHHHH-HHcCcC--HHHHHHHH
Confidence            777666666688875421   1100000 00                         0000111 111111  11111111


Q ss_pred             HHHHHHHHHHHhhhhhhh-hhcCcchhhhhhhhHHHHHHHhHHHH-HHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHH
Q 045073          163 FLLDIAFYTINLAQKDIY-PATGIVRKAAAMDAIEEVFRISKAMF-LVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM  240 (402)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~  240 (402)
                      +......+....+.+.++ ++.|++..+.+.            .. ....++.++|.+++|+++||+|+|+.+..+.++.
T Consensus       232 ~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~------------~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~  299 (491)
T PRK11010        232 VLYKLGDAFAMSLTTTFLIRGVGFDAGEVGL------------VNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQ  299 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            222223333334445554 558888887554            43 4556788899999999999999988777665554


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHH
Q 045073          241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAG  320 (402)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~  320 (402)
                      ++..+.+..... ..                .+.........+.....+.+. +..+++..+..+++.+++..++.+...
T Consensus       300 ~l~~l~~~~l~~-~~----------------~~~~~l~~~~~l~~~~~g~~~-~~~~a~~~~l~~~~~~~t~~gl~~s~~  361 (491)
T PRK11010        300 GVSNAGYWLLSI-TD----------------KNLYSMGAAVFFENLCGGMGT-AAFVALLMTLCNKSFSATQFALLSALS  361 (491)
T ss_pred             HHHHHHHHHHHh-cc----------------ccHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHcCCCCcHHHHHHHHHHH
Confidence            444333222111 00                111111111111111111111 234677788999999999999999999


Q ss_pred             HHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeecc
Q 045073          321 KAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPET  366 (402)
Q Consensus       321 ~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et  366 (402)
                      .+|..+++.+.|.+.+..  ||...|.+.+++.+++.++.++++++
T Consensus       362 ~lg~~~~~~~~G~l~~~~--G~~~~f~~~~~~~l~~l~~~~~~~~~  405 (491)
T PRK11010        362 AVGRVYVGPVAGWFVEAH--GWPTFYLFSVAAAVPGLLLLLVCRQT  405 (491)
T ss_pred             HHHHHHHHHHHHHHHHHh--ChHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999998888999999987  88899999888888887777666544

>TIGR00712 glpT glycerol-3-phosphate transporter

Probab=99.85  E-value=9.2e-20  Score=170.93  Aligned_cols=297  Identities=13%  Similarity=0.136  Sum_probs=173.9

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      +....++.|++|+++||+++++.+.+..+|..+++.+......                      ...+||+.|++.+++
T Consensus       137 ~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~----------------------~~~~w~~~f~~~~~~  194 (438)
T TIGR00712       137 PPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMA----------------------WFNDWHAALYFPAIC  194 (438)
T ss_pred             HHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHH----------------------HhhhhHHHHHHHHHH
Confidence            4456788899999999999999999999999988877655431                      336899999997777


Q ss_pred             HHH-HHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073           83 AAL-TYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST  161 (402)
Q Consensus        83 ~~~-~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (402)
                      +++ .++..+++||+|+...   .++.++.       +.+..++..+  + .+++.+..+.+.+...++  +.++.....
T Consensus       195 ~~i~~~~~~~~~~~~~~~~~---~~~~~~~-------~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~  259 (438)
T TIGR00712       195 AIIVALFAFAMMRDTPQSCG---LPPIEEY-------RNDYPDDYNE--K-AEQELTAKEIFMQYVLPN--KLLWYIAIA  259 (438)
T ss_pred             HHHHHHHHHHhccCCHHhcC---CCCchhc-------cccccccccc--c-cccccchHHHHHHHHccC--chHHHHHHH
Confidence            665 4455566888875411   0110000       0000000000  0 000011111111112222  234444444


Q ss_pred             HHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHH
Q 045073          162 WFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM  240 (402)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~  240 (402)
                      .++.....++...+.|.++++ .|+++.+.+.            ...+..+..+++.+++|++.||+++++....+....
T Consensus       260 ~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~------------~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~  327 (438)
T TIGR00712       260 NVFVYLLRYGVLDWSPTYLKEVKHFALDKSSW------------AYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFM  327 (438)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHccCCChhhHHH------------HHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHH
Confidence            444445667778889999876 5888776544            566677788899999999999996443222222222


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHH
Q 045073          241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAG  320 (402)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~  320 (402)
                      .+..+.......  ...              .+.+.. ....+..+....+..........|.+|++.|+++.|+.+...
T Consensus       328 ~~~~~~~~~~~~--~~~--------------~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~  390 (438)
T TIGR00712       328 TLVTIAVIVYWM--NPA--------------GNPLVD-MICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFG  390 (438)
T ss_pred             HHHHHHHHHHHh--cCC--------------CchHHH-HHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHH
Confidence            111111111110  000              111111 111112222122222222345679999999999999999988


Q ss_pred             HHhH-HHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee-eccC
Q 045073          321 KAGA-IVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV-PETN  367 (402)
Q Consensus       321 ~~g~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~-~et~  367 (402)
                      ++++ +++|.+.+.+.+..  ++...+.+.+++.+++.+..+++ ||.|
T Consensus       391 ~~gg~~~gp~l~G~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~  437 (438)
T TIGR00712       391 YLGGSVAASAIVGYTVDFF--GWDGGFMVMIGGSILAVILLIVVMIGEK  437 (438)
T ss_pred             HhhhhhhcchhHHHHHHhc--cchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            8875 68999999999977  78888888887777776666544 6644

This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.

>TIGR00890 2A0111 Oxalate/Formate Antiporter

Probab=99.84  E-value=3.2e-19  Score=164.11  Aligned_cols=265  Identities=12%  Similarity=0.025  Sum_probs=166.5

Q ss_pred             cchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHH
Q 045073            4 LSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPA   83 (402)
Q Consensus         4 ~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~   83 (402)
                      ....++.|++| ++|+++.++...+.++|.++++.+...+.                       +..+||+.|++.++..
T Consensus       111 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----------------------~~~~~~~~f~~~~~~~  166 (377)
T TIGR00890       111 IALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVI-----------------------NLEGVPAAFIYMGIIF  166 (377)
T ss_pred             hHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHH-----------------------hcccHHHHHHHHHHHH
Confidence            34556778887 67999999999999999887666655554                       4568999999977766


Q ss_pred             HHHHHH-HhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073           84 ALTYYW-RMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW  162 (402)
Q Consensus        84 ~~~~~~-~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (402)
                      ++..+. .++++|+|+.  . ++++++.                      .+++...    ++..+++   ..+......
T Consensus       167 ~~~~~~~~~~~~~~~~~--~-~~~~~~~----------------------~~~~~~~----~~~~~~~---~~~~~~~~~  214 (377)
T TIGR00890       167 LLVIVLGAFLIGYPPGQ--L-IKTNIEV----------------------SVKDYTV----WEMLRTP---QFWVLYLSF  214 (377)
T ss_pred             HHHHHHHHHheecCchh--c-cccCccc----------------------chhhhhH----HHHHcCc---cHHHHHHHH
Confidence            664443 4445554321  0 0000000                      0000000    1111111   122222222


Q ss_pred             HHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHH
Q 045073          163 FLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSI  242 (402)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~  242 (402)
                      +...........+.+.+.++.|.+..+.+.            ......++.+++.++.|++.||+|||+.+..+..+..+
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~  282 (377)
T TIGR00890       215 FLNAVSGLLLIGLYKPYGQSLGLSDGFLVL------------AVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAV  282 (377)
T ss_pred             HHHhHHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHH
Confidence            222223333334455566777777655443            66677788889999999999999999998888777766


Q ss_pred             HHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHH
Q 045073          243 CMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKA  322 (402)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~  322 (402)
                      +.+.+.....                   ... ..........+.......+....+..|.+|++.|+++.|+.+....+
T Consensus       283 ~~~~~~~~~~-------------------~~~-~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  342 (377)
T TIGR00890       283 GMAAMLFIPM-------------------LND-VLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAV  342 (377)
T ss_pred             HHHHHHHccc-------------------chh-HHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHH
Confidence            6655443210                   111 11111122222222333345566789999999999999999999999


Q ss_pred             hHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhh
Q 045073          323 GAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFL  358 (402)
Q Consensus       323 g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i  358 (402)
                      |..++|.+.+.+.+..  +|+..|.+.+++.+++.+
T Consensus       343 g~~~~~~~~g~l~~~~--g~~~~f~~~~~~~~~~~~  376 (377)
T TIGR00890       343 AGIFGGLIASHALTEI--GFEYTFIVTGAFALTSLA  376 (377)
T ss_pred             HHHHHHHHHHHHHhhh--chhhHHHHHHHHHHHhcc
Confidence            9999999999998877  888898888887776643

>PLN00028 nitrate transmembrane transporter; Provisional

Probab=99.84  E-value=2.6e-19  Score=169.21  Aligned_cols=280  Identities=12%  Similarity=0.029  Sum_probs=154.4

Q ss_pred             chhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHH
Q 045073            5 SAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAA   84 (402)
Q Consensus         5 ~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~   84 (402)
                      +..+++|++|+++||+++++......+|..+++.+...+........              ..+..|||+.|++.+++++
T Consensus       144 ~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~--------------~~~~~gWr~~f~i~g~l~l  209 (476)
T PLN00028        144 CQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAG--------------APSFTAWRIAFFVPGLLHI  209 (476)
T ss_pred             HHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------------CcchhhhHHHHHHHHHHHH
Confidence            34578999999999999999987777888777766654432211100              0023589999999777666


Q ss_pred             HHHHHHhhc-cCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHHH
Q 045073           85 LTYYWRMKM-PETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWF  163 (402)
Q Consensus        85 ~~~~~~~~~-pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (402)
                      +..+..+++ ++.|+-      +.++.    .+        + .+     .++....+.++.....   +.++...+.++
T Consensus       210 ~~~l~~~~~~~~~p~~------~~~~~----~~--------~-~~-----~~~~~~~~~~~~~~~~---~~~~~~~~~~~  262 (476)
T PLN00028        210 IMGILVLTLGQDLPDG------NYREL----KK--------S-GT-----MPKDSFSKVLRYGVTN---YRTWILALTYG  262 (476)
T ss_pred             HHHHHHHHHcCcCCCC------chhhH----Hh--------c-Cc-----cccccHHHHHHHHHcC---chhHHHHHHHH
Confidence            654444444 444421      00000    00        0 00     0000011111111111   12333333333


Q ss_pred             HHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhH-------HHHH
Q 045073          164 LLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFI-------IQLG  235 (402)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~-------~~~~  235 (402)
                      ......+....+.|.++. ..|++..+++.            ...+..++.+++.+++|+++||++||+       ....
T Consensus       263 ~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~------------~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~  330 (476)
T PLN00028        263 YSFGVELTMDNIIAEYFYDRFGLSLETAGA------------IAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWI  330 (476)
T ss_pred             HHHHHHHHHHhHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHH
Confidence            333444555667777764 46888776554            677778888999999999999998762       2222


Q ss_pred             HHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhH
Q 045073          236 GFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGI  315 (402)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~  315 (402)
                      ...+.++..+++...                     .+.......+.+. ++......+..+++..+..| +.|+++.|+
T Consensus       331 ~~~l~~i~~~~~~~~---------------------~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~  387 (476)
T PLN00028        331 VQTLGGVFCIWLGRA---------------------NSLGAAIVVMILF-SIFVQAACGATFGIVPFVSR-RSLGVISGL  387 (476)
T ss_pred             HHHHHHHHHHHhccc---------------------chHHHHHHHHHHH-HHHHHHhhhhhcccCcccCh-hhchhhhhh
Confidence            222111211111110                     1111112111121 22112222345556667655 789999999


Q ss_pred             HHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073          316 SAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV  363 (402)
Q Consensus       316 ~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~  363 (402)
                      .+..+.+|+++++.+.+. .+..  +|...|.+.+++.+++.++.+++
T Consensus       388 ~~~~g~lg~~i~~~l~~~-~~~~--~y~~~f~~~~~~~~i~~~~~~~~  432 (476)
T PLN00028        388 TGAGGNVGAVLTQLLFFT-GSSY--STETGISLMGVMIIACTLPVAFI  432 (476)
T ss_pred             hhccccHHHHHHHHHHHh-cCCc--cHhhHHHHHHHHHHHHHHHHHhe
Confidence            988887888877766541 1111  58888988888888887777655

>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=99.84  E-value=4e-19  Score=164.26  Aligned_cols=289  Identities=13%  Similarity=0.136  Sum_probs=193.6

Q ss_pred             CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073            2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV   81 (402)
Q Consensus         2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i   81 (402)
                      +|+...+.+.|+|++||++..++...+..+|.+++-.+++.+..                      ...||+.+|++.++
T Consensus       146 ~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~----------------------s~~GW~sifY~~g~  203 (466)
T KOG2532|consen  146 FPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCE----------------------SSLGWPSIFYVFGI  203 (466)
T ss_pred             HhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhc----------------------cCCCCchHHHHHHH
Confidence            67788999999999999999999999999999999999998871                      24899999999777


Q ss_pred             HHHHHHH-HHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHH
Q 045073           82 PAALTYY-WRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTS  160 (402)
Q Consensus        82 ~~~~~~~-~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (402)
                      .+++..+ ..++..|+|.-   ++.-.+++.+.+.+-...+   +.       +  +. .+.-.+...+.  ..++.+.+
T Consensus       204 ~g~i~~~~w~~~~~d~P~~---h~~is~~El~~I~~~k~~~---~~-------~--~~-~~vP~~~i~ts--~~vwai~~  265 (466)
T KOG2532|consen  204 VGLIWFILWFLFYSDSPSK---HPNISEKELKYIEKGKSEA---HV-------K--KK-PPVPYKAILTS--PPVWAIWI  265 (466)
T ss_pred             HHHHHHHHHHHHhcCCccc---CCCCCHHHHHHHHhccccc---cc-------C--CC-CCCCHHHHHcC--HHHHHHHH
Confidence            7776544 45557888864   1223333333333211110   00       0  00 11112222222  37888899


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccch---------h
Q 045073          161 TWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGR---------F  230 (402)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~gr---------r  230 (402)
                      ..++...+++....|+|.|+++ +|++..+.+.            ..++..+...+..+++|.++||+.+         |
T Consensus       266 ~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~------------~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rk  333 (466)
T KOG2532|consen  266 SAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGF------------LSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRK  333 (466)
T ss_pred             HHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhH------------HHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHH
Confidence            9999999999999999999986 8888887776            8888888999999999999999855         2


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhh
Q 045073          231 IIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRS  310 (402)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~  310 (402)
                      ..-.++....+++++.+++.    ..               ...+..++++.+..++  .+.....+........+++-+
T Consensus       334 ifn~i~~~~~ai~l~~l~~~----~~---------------~~~~~a~~~l~~~~~~--~g~~~~Gf~~~~~~~apq~a~  392 (466)
T KOG2532|consen  334 IFNTIAFGGPAVFLLVLAFT----SD---------------EHRLLAVILLTIAIGL--SGFNISGFYKNHQDIAPQHAG  392 (466)
T ss_pred             HHHhHHHHHHHHHHHeeeec----CC---------------CcchHHHHHHHHHHHH--cccchhhhHhhhhhccchHHH
Confidence            22233333333333333332    11               1122223333222222  222212222222221457779


Q ss_pred             hhhhHHHHHHHHhHHHHhHhHHhhhh-ccCCcchhhHHHHHHHHHHHhhheeee
Q 045073          311 TCHGISAAAGKAGAIVGAFGVQYYTQ-KGDKQIKQSIITLAVVNFLGFLCSFMV  363 (402)
Q Consensus       311 ~~~~~~~~~~~~g~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~i~~~~~  363 (402)
                      ..+|+.+....+.++++|.+.+.+.. ....+|+.+|++.+++.+++.++..++
T Consensus       393 ~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f  446 (466)
T KOG2532|consen  393 FVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF  446 (466)
T ss_pred             HHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence            99999999999999999999998884 211289999999999999988776665

>PRK05122 major facilitator superfamily transporter; Provisional

Probab=99.84  E-value=5.7e-19  Score=163.86  Aligned_cols=264  Identities=11%  Similarity=-0.024  Sum_probs=169.2

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      +...+++.|+.|+++|++++++.+.+..+|.++++.+++.+.                       ...+||+.+++.++.
T Consensus       131 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~-----------------------~~~g~~~~~~~~~~~  187 (399)
T PRK05122        131 TGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLY-----------------------HWGGLAGLGLLIMLL  187 (399)
T ss_pred             chHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHH-----------------------HcccHHHHHHHHHHH
Confidence            445677889999999999999999999999999999998886                       567899998886665


Q ss_pred             HHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073           83 AALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW  162 (402)
Q Consensus        83 ~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (402)
                      +++.++.....|+++.     ++++++                            +     .....++.+....    ..
T Consensus       188 ~~~~~~~~~~~~~~~~-----~~~~~~----------------------------~-----~~~~~~~~~~~~~----~~  225 (399)
T PRK05122        188 ALLGLLLARPRPAVPP-----VKGERL----------------------------P-----FRRVLGRVWPYGM----GL  225 (399)
T ss_pred             HHHHHHHHhcCCCCCC-----CCccch----------------------------h-----HHHHHHHHHHHHH----HH
Confidence            5544443332333221     000000                            0     0011111111111    11


Q ss_pred             HHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHH
Q 045073          163 FLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSI  242 (402)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~  242 (402)
                      ......+.....+.+.++.+.|.+..  +.            ......++.+++.++.+++.||+|||+.+..+..+.++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------------~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~  291 (399)
T PRK05122        226 ALASIGFGTIATFITLYYAARGWDGA--AL------------ALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEIL  291 (399)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcccccc--hH------------HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence            11222334444566666666555221  11            33455667778888999999999999988887776666


Q ss_pred             HHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHH
Q 045073          243 CMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKA  322 (402)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~  322 (402)
                      +.+++...                     .+.+... +..+..+++.....+.......|..|++.|+++.|+.+....+
T Consensus       292 ~~~~~~~~---------------------~~~~~~~-~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~  349 (399)
T PRK05122        292 GLLLLWLA---------------------PSPWMAL-IGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDL  349 (399)
T ss_pred             HHHHHHHh---------------------ccHHHHH-HHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence            65544432                     2222222 2222222222233344445667889999999999999999999


Q ss_pred             hHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeeccCCc
Q 045073          323 GAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETNGL  369 (402)
Q Consensus       323 g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~~~  369 (402)
                      |..+++.+.+.+.+..  +++..+.+.+++.+++.++.+++++++++
T Consensus       350 g~~~~~~~~g~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (399)
T PRK05122        350 SLGITGPLAGLVASWF--GYPSIFLAAALAALLGLALTWLLYRRAPR  394 (399)
T ss_pred             HHHHHHHHHHHHHHHc--CHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence            9999999999998877  88899998888888887776666554443

>TIGR00892 2A0113 monocarboxylate transporter 1

Probab=99.84  E-value=3.7e-20  Score=174.06  Aligned_cols=285  Identities=12%  Similarity=0.054  Sum_probs=168.9

Q ss_pred             cchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHH
Q 045073            4 LSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPA   83 (402)
Q Consensus         4 ~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~   83 (402)
                      ....++.|+++ ++|+++.++.+.+..+|..+++.+++.+.                       +..|||+.|++.+++.
T Consensus       128 ~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~-----------------------~~~gwr~~f~~~~~~~  183 (455)
T TIGR00892       128 PSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLF-----------------------ESFGWRGSFLILGGLL  183 (455)
T ss_pred             HHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHH-----------------------HHhChHHHHHHHHHHH
Confidence            34567788886 78999999999999999999999988876                       5578999999977766


Q ss_pred             HHHHHHHhhc-cCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073           84 ALTYYWRMKM-PETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW  162 (402)
Q Consensus        84 ~~~~~~~~~~-pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (402)
                      ++..+..+++ ++.+..    +..+.+..+   . ...+...+  +. ......+...+.......++  +.++......
T Consensus       184 ~~~~v~~~~~~~~~~~~----~~~~~~~~~---~-~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  250 (455)
T TIGR00892       184 LHCCVCGALMRPVGPSQ----RVSKSKSKE---G-LPPDGSTK--KL-SKKSTAEKINRFLDFSLFTH--RGFLVYLSGN  250 (455)
T ss_pred             HHHHHHHHHhCCCCccc----ccccccccc---c-CCCCCccc--cc-cccchhhhhhhhcchHHhcC--chHHHHHHHH
Confidence            6554444333 322211    000000000   0 00000000  00 00000000011111112222  1333444444


Q ss_pred             HHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhcc--chhHHHHHHH--H
Q 045073          163 FLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRI--GRFIIQLGGF--L  238 (402)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~--grr~~~~~~~--~  238 (402)
                      +.....++....+.|.+.++.|++..+.+.            ......++.+++.++.+++.||.  ++|+....+.  +
T Consensus       251 ~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~------------~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~  318 (455)
T TIGR00892       251 VIMFLGFFAPIIFLVPYAKDKGVDEYEAAF------------LLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALL  318 (455)
T ss_pred             HHHHHHccchHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHH
Confidence            444556666677888888888888776554            56667778888888999999973  3343333322  2


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHH
Q 045073          239 LMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAA  318 (402)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~  318 (402)
                      ..+++.++....                     .+.+. +.+..+..++......+...+++.|.+|++.++++.|+.+.
T Consensus       319 ~~~l~~ll~~~~---------------------~~~~~-~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~  376 (455)
T TIGR00892       319 FNGLTHLLCALA---------------------GDYTG-LVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTI  376 (455)
T ss_pred             HHHHHHHHHHHh---------------------chHHH-HHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHH
Confidence            222222222111                     22222 22233333333334445667788899999999999999999


Q ss_pred             HHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhe
Q 045073          319 AGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCS  360 (402)
Q Consensus       319 ~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~  360 (402)
                      ...+|.+++|.+.+.+.+..+ +++..|++.+++.+++.+..
T Consensus       377 ~~~lg~~igp~i~G~l~~~~g-~~~~~f~~~~~~~li~~~~~  417 (455)
T TIGR00892       377 VECCAVLIGPPLAGRLVDATK-NYKYIFYASGSIVVSAGLFL  417 (455)
T ss_pred             HHHHHHHccccceeeeehhcC-CcchHHHHhhHHHHHHHHHH
Confidence            999999999999999988763 57788888877776665543

>PRK15011 sugar efflux transporter B; Provisional

Probab=99.83  E-value=6.4e-19  Score=162.91  Aligned_cols=264  Identities=11%  Similarity=0.051  Sum_probs=160.9

Q ss_pred             cchhhhhhccCcccc--hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073            4 LSAVIMSEYANKRTR--GAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV   81 (402)
Q Consensus         4 ~~~~~i~e~~~~~~R--g~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i   81 (402)
                      ....++.|+.+++.|  +...++.+.+.++|.++++.+++.+.                       +..|||..|++.++
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~-----------------------~~~gw~~~f~~~~~  181 (393)
T PRK15011        125 QMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALA-----------------------MGFSFTVMYLSAAV  181 (393)
T ss_pred             HHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHH-----------------------HhcChHHHHHHHHH
Confidence            445667777776655  44567888899999999999999986                       56799999998776


Q ss_pred             HHHHH-HHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHH
Q 045073           82 PAALT-YYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTS  160 (402)
Q Consensus        82 ~~~~~-~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (402)
                      ..++. ++...++||.|+-    ++..++               +.+      .        .++ . ++   ..+....
T Consensus       182 ~~~~~~~~~~~~~~~~~~~----~~~~~~---------------~~~------~--------~~~-~-~~---~~~~~~~  223 (393)
T PRK15011        182 AFIVCGVMVWLFLPSMRKE----LPLATG---------------TLE------A--------PRR-N-RR---DTLLLFV  223 (393)
T ss_pred             HHHHHHHHHHhhcCccCCC----Cccccc---------------ccc------c--------ccc-c-cc---cHHHHHH
Confidence            66554 4445557886531    110000               000      0        000 0 01   0111111


Q ss_pred             HHHHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHH
Q 045073          161 TWFLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL  239 (402)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~  239 (402)
                      ..+.....++....+.|.+++ ++|++..+.+.            ......+..+++.++.|+++||+|||+.+..+...
T Consensus       224 ~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~------------~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~  291 (393)
T PRK15011        224 ICTLMWGTNSLYIINMPLFIINELHLPEKLAGV------------MMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVA  291 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHH
Confidence            111122233344456777764 47777765443            44444566677888999999999999887766544


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH
Q 045073          240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA  319 (402)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~  319 (402)
                      ..+........                     .+.+..+....+...... ...+....+..|.+|+ .|+++.++.+..
T Consensus       292 ~~~~~~~~~~~---------------------~~~~~~l~~~~l~~~~~g-~~~~~~~~~~~~~~p~-~~g~~~~~~~~~  348 (393)
T PRK15011        292 GVCFYAGMLMA---------------------HSPAILLGLQLLNAIYIG-ILGGIGMLYFQDLMPG-QAGSATTLYTNT  348 (393)
T ss_pred             HHHHHHHHHHH---------------------hhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCC-CcchHHHHHHHH
Confidence            43332222111                     111222211111111111 1112234556888886 489999999999


Q ss_pred             HHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeec
Q 045073          320 GKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPE  365 (402)
Q Consensus       320 ~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~e  365 (402)
                      ..+|..+++.+.+.+.+..  +++..+.+.+++.+++.+..+++||
T Consensus       349 ~~lg~~~g~~l~G~i~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~  392 (393)
T PRK15011        349 SRVGWIIAGSLAGIVAEIW--NYHAVFWFALVMIIATLFCLLRIKD  392 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHHHhhcC
Confidence            9999999999999999877  8888888888888888877776665

>PRK09705 cynX putative cyanate transporter; Provisional

Probab=99.83  E-value=1.1e-18  Score=161.22  Aligned_cols=271  Identities=7%  Similarity=-0.025  Sum_probs=175.6

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      +....++.|++| ++|+++++++..+..+|..+++.++..+..                      ...+||+.+.+.++.
T Consensus       116 ~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~----------------------~~~~w~~~~~~~~~~  172 (393)
T PRK09705        116 AVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQ----------------------HSETWYQTLAWWALP  172 (393)
T ss_pred             hhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHH----------------------hcCCHHHHHHHHHHH
Confidence            455678889887 889999999999999999999998887751                      224799988775555


Q ss_pred             HHHHHHHHhhcc-CCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073           83 AALTYYWRMKMP-ETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST  161 (402)
Q Consensus        83 ~~~~~~~~~~~p-esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (402)
                      .++.++..+... +.|+      +  ++                        +++....+.++    ++   ..+...+.
T Consensus       173 ~~~~~~~~~~~~~~~~~------~--~~------------------------~~~~~~~~~l~----~~---~~~~l~~~  213 (393)
T PRK09705        173 AVVALFAWWWQSAREVA------S--SH------------------------KTTTTPVRVVF----TP---RAWTLGVY  213 (393)
T ss_pred             HHHHHHHHHHHhcCCCc------c--cc------------------------CCCcCCccccc----CH---hHHHHHHH
Confidence            544433332221 1110      0  00                        00000011111    11   22333334


Q ss_pred             HHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHH
Q 045073          162 WFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMS  241 (402)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~  241 (402)
                      .+.....++....+.|.++++.|.+..+.+.            ...+..++.+++.++.+++.||++||+.+..+..+..
T Consensus       214 ~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~------------~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~  281 (393)
T PRK09705        214 FGLINGGYASLIAWLPAFYIEIGASAQYSGS------------LLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQL  281 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCChhhhhH------------HHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHH
Confidence            4444556777888899999888888776555            6777888999999999999999999998888776665


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccccccccc-ccchhhhhhhHHHHHH
Q 045073          242 ICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELF-PARLRSTCHGISAAAG  320 (402)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~  320 (402)
                      ++..++....                    ..... ....  ..+.......+.......+.+ |++.|++..|+.+..+
T Consensus       282 ~~~~~~~~~~--------------------~~~~~-~~~~--l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~  338 (393)
T PRK09705        282 VGFCGFIWLP--------------------LQLPV-LWAM--VCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIG  338 (393)
T ss_pred             HHHHHHHHcc--------------------chHHH-HHHH--HHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHH
Confidence            5544333210                    11111 1111  112222233344444555666 4678999999999999


Q ss_pred             HHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee-eccCCccc
Q 045073          321 KAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV-PETNGLSL  371 (402)
Q Consensus       321 ~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~-~et~~~~~  371 (402)
                      .+++.++|.+.+++.+..+ ++...|.+.++++++..++.+.+ |||+.+..
T Consensus       339 ~~~~~~gp~~~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  389 (393)
T PRK09705        339 FIIAGLAPWFSGVLRSISG-NYLMDWAFHALCVVGLMIITLRFAPARFPQLW  389 (393)
T ss_pred             HHHHHHHHHHHHHHHHHhC-CchHHHHHHHHHHHHHHHHHHHhccccccchh
Confidence            9999999999999999874 56777777777777666665544 88876543

>PRK03699 putative transporter; Provisional

Probab=99.83  E-value=4.7e-19  Score=163.93  Aligned_cols=269  Identities=11%  Similarity=0.064  Sum_probs=172.9

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      +....++.|++|+++|+++++..+....+|..+++.+.+.+..                      ...+||+.|.+.+++
T Consensus       114 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~----------------------~~~gw~~~f~~~~~~  171 (394)
T PRK03699        114 SIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLA----------------------RSIEWYWVYACIGLV  171 (394)
T ss_pred             cchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------------------ccccHHHHHHHHHHH
Confidence            4567889999999999999999988889999999888776641                      346899999987666


Q ss_pred             HHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073           83 AALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW  162 (402)
Q Consensus        83 ~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (402)
                      .++..++.++ .+.|+.    ++++++               +  +.    +..       +.. .+   +.++...+..
T Consensus       172 ~~~~~~~~~~-~~~p~~----~~~~~~---------------~--~~----~~~-------~~~-~~---~~~~~~~~~~  214 (394)
T PRK03699        172 YVAIFILTLF-SEFPAL----GKHAPK---------------A--DK----PVA-------KEK-WG---IGVLFLAIAA  214 (394)
T ss_pred             HHHHHHHHHh-cCCccc----cccCcc---------------c--cC----ccc-------ccc-CC---hHHHHHHHHH
Confidence            6554443332 222321    000000               0  00    000       000 01   1233344444


Q ss_pred             HHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHH
Q 045073          163 FLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMS  241 (402)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~  241 (402)
                      +......+....|.|.+++ ..|++..+.+.            ......++.+++.++.++++||++||+.+.....+..
T Consensus       215 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~------------~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~  282 (394)
T PRK03699        215 LLYILAQLTFISWVPEYAQKKFGMSLEDAGN------------LVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLAL  282 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCChHHhhH------------HHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHH
Confidence            4444566777889999985 47888776554            5666677888999999999999999998877665554


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHH
Q 045073          242 ICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGK  321 (402)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~  321 (402)
                      +...++...                     .+...... ..+..++...+..+...++..|..|. .++...+.......
T Consensus       283 ~~~~~~~~~---------------------~~~~~~~~-~~~~~G~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~  339 (394)
T PRK03699        283 VLMYLFVNT---------------------DDPSHLLY-AILGLGFFSSAIYTTIITLGSQQTKV-ASPKLVNFILTCGT  339 (394)
T ss_pred             HHHHHHHHc---------------------CCchHHHH-HHHHHHHHHHHHHHHHHHHHHHHccC-CCHHHHHHHHHhhh
Confidence            443333221                     11112222 22222332333444555566676664 45777888888999


Q ss_pred             HhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeeccC
Q 045073          322 AGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETN  367 (402)
Q Consensus       322 ~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~  367 (402)
                      +|..++|.+.+.+.+..  +++..+++.+++.+++.+....++++.
T Consensus       340 ~g~~i~p~~~G~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (394)
T PRK03699        340 IGTMLTFVVTSPIVAHF--GLQAALLTANGLYAVVFVMCILLGFVS  383 (394)
T ss_pred             HHHHHHHHHHHHHHHHh--CchhhhhhhHHHHHHHHHHHHHHHHHH
Confidence            99999999999999887  888888888888777766655555443

>TIGR00899 2A0120 sugar efflux transporter

Probab=99.83  E-value=8e-19  Score=161.50  Aligned_cols=265  Identities=13%  Similarity=0.105  Sum_probs=164.2

Q ss_pred             CcchhhhhhccCcccchhH--HHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhH
Q 045073            3 PLSAVIMSEYANKRTRGAF--IAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGA   80 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~--~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~   80 (402)
                      |...+++.|+.|+++|++.  .+....+.++|.++++.+++.+.                       +..+||+.|++.+
T Consensus       106 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~-----------------------~~~~~~~~f~~~~  162 (375)
T TIGR00899       106 PQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLA-----------------------LGFGFTVMFLTAA  162 (375)
T ss_pred             HHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHH-----------------------HhcccHHHHHHHH
Confidence            3445677888888777754  57778888999999999998886                       5578999999977


Q ss_pred             HHHHHHHHH-HhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHH
Q 045073           81 VPAALTYYW-RMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTT  159 (402)
Q Consensus        81 i~~~~~~~~-~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (402)
                      ++.++..+. .+++||+|+..  ++++..                         .   ..    +...+++..+......
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~-------------------------~---~~----~~~~~~~~~~~~~~~~  208 (375)
T TIGR00899       163 LAFVLCGVLVWLFLPSYPRGA--PGALTR-------------------------L---EV----RGLLASRDTRLLFVAC  208 (375)
T ss_pred             HHHHHHHHHHHHhCCCcccCc--ccccCc-------------------------c---hh----hhhhcCcchHHHHHHH
Confidence            776655444 45589877531  000000                         0   00    0011111111111111


Q ss_pred             HHHHHHHHHHHHHHhhhhhhh-hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHH
Q 045073          160 STWFLLDIAFYTINLAQKDIY-PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFL  238 (402)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~  238 (402)
                      +.   ..........+.|.++ ++.|.++.+.+.            ......+..+++.++.|++.||+|||+.+..+.+
T Consensus       209 ~~---~~~~~~~~~~~~~~~~~~~~g~~~~~~g~------------~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~  273 (375)
T TIGR00899       209 TL---MWGCNILYIINMPLLIIHELGLPDKLAGL------------MMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAAL  273 (375)
T ss_pred             HH---HHHHHHHHHhhhHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHH
Confidence            11   1112223334556665 457777765443            3344445566777889999999999998877665


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHH
Q 045073          239 LMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAA  318 (402)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~  318 (402)
                      ...+....+...                     .+.+... ......++......+....+..|..|++ ++++.++.+.
T Consensus       274 ~~~~~~~~~~~~---------------------~~~~~~~-~~~~~~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~  330 (375)
T TIGR00899       274 AGVAFYTGLAAD---------------------NSLWALL-MLQLLNAIFIGILAGIGMLYFQDLMPGR-AGAATTLYTN  330 (375)
T ss_pred             HHHHHHHHHHHH---------------------HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCcch-hhHHHHHHHH
Confidence            544433322221                     1122222 2222222222222345566778888865 5699999999


Q ss_pred             HHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeee
Q 045073          319 AGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVP  364 (402)
Q Consensus       319 ~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~  364 (402)
                      ..++|..++|.+.+.+.+..  +++..+++.+++.+++.++..+++
T Consensus       331 ~~~~g~~~g~~~~g~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~  374 (375)
T TIGR00899       331 TGRVGWIIAGSVGGILAERW--SYHAVYWFAIVMLIVALFCLLLIK  374 (375)
T ss_pred             HHHHHHHHHHHHHHHHHHhc--cchhHHHHHHHHHHHHHHHHheec
Confidence            99999999999999998877  888899998888888877766654

This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

Probab=99.82  E-value=8.1e-19  Score=154.01  Aligned_cols=274  Identities=15%  Similarity=0.189  Sum_probs=199.6

Q ss_pred             CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCch---hHHHHHH
Q 045073            2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYL---WRIVLMF   78 (402)
Q Consensus         2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---Wr~~f~~   78 (402)
                      +.++..++++++|++++|.++|+.. ..++|..+...++-.+.                       ...+   ||....+
T Consensus       122 Fav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~-----------------------~~~g~~~w~~~~~i  177 (417)
T COG2223         122 FAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVA-----------------------VAFGFLAWRNVAGI  177 (417)
T ss_pred             ehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHH-----------------------HHHhhHHHHHHHHH
Confidence            5678899999999999999999999 88999999999988887                       3445   9999988


Q ss_pred             hHHHHHH-HHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHH
Q 045073           79 GAVPAAL-TYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLG  157 (402)
Q Consensus        79 ~~i~~~~-~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (402)
                      -.++.++ .+..++.+.|.|..  ....++.+.                              ..++....+   +..+.
T Consensus       178 ~~~~l~v~~v~~~~~~~d~p~~--r~~~~~~~~------------------------------~~~~~v~~~---~~~W~  222 (417)
T COG2223         178 YVVALAIAAVLAWLGMNDVPEH--RASVKPQLP------------------------------AQLKAVFSN---KDTWL  222 (417)
T ss_pred             HHHHHHHHHHHHHHHhCCChhh--hccccccch------------------------------hHHHHHhcC---cchHH
Confidence            7766666 44555567777754  111111100                              000111112   25677


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHH
Q 045073          158 TTSTWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGG  236 (402)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~  236 (402)
                      +++.++....++-++..++|.++++ +|.++.+++.            ......+...+...++|+++||+|.+++++..
T Consensus       223 lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~------------~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~  290 (417)
T COG2223         223 LSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGL------------IAFLFPLIGALARPLGGWLSDRIGGRRVTLAV  290 (417)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHH------------HHHHHHHHHHHHHhccchhhhhccchhHHHHH
Confidence            7777777777888889999999865 8998887665            66667777777888999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHH
Q 045073          237 FLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGIS  316 (402)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~  316 (402)
                      +..++++..+.+.........              .+.......+.....+.+.+. ...+.++..++|.+ -|.+.|+.
T Consensus       291 f~~~~~~~~~l~~~~~~~~~~--------------~~~~~~~~~~l~l~~~~G~Gn-Gsvfk~Ip~if~~~-~G~v~G~v  354 (417)
T COG2223         291 FVGMALAAALLSLFLTGFGHG--------------GSFVVFVAVFLALFVFAGLGN-GSVFKMIPVIFPKE-TGAVTGIV  354 (417)
T ss_pred             HHHHHHHHHHHHccccccccC--------------cchHHHHHHHHHHHHHhccCc-chheeechHHHHhh-hhHHHHHH
Confidence            888888877776643211111              223333333333333434443 36777888888864 58888999


Q ss_pred             HHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073          317 AAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV  363 (402)
Q Consensus       317 ~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~  363 (402)
                      ..++.+|++.-|...+...+.++ .+...|+++..+.+++.++.+.+
T Consensus       355 ga~G~lGGf~lp~~~g~~~~~tg-~~~~~f~~~~~~~~~a~v~~~~~  400 (417)
T COG2223         355 GAIGGLGGFFLPLAFGVSLDLTG-SYTGAFMLLLAFYLVALVLTWAL  400 (417)
T ss_pred             HHhccccccchhHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999885 58889999999999888877755

>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

Probab=99.82  E-value=3e-18  Score=155.96  Aligned_cols=245  Identities=20%  Similarity=0.299  Sum_probs=187.8

Q ss_pred             CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073            2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV   81 (402)
Q Consensus         2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i   81 (402)
                      ++...+++.|++|+++|++.+++...+..+|..+++.+++.+.                       +..+||+.+++.++
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~  161 (352)
T cd06174         105 YPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLA-----------------------ESLGWRWLFLILAI  161 (352)
T ss_pred             cHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHH-----------------------HHhhHHHHHHHHHH
Confidence            3566789999999999999999999999999999999999886                       44679999999777


Q ss_pred             HHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073           82 PAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST  161 (402)
Q Consensus        82 ~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (402)
                      ..++..+...+++                                                          +.++.....
T Consensus       162 ~~~~~~~~~~~~~----------------------------------------------------------~~~~~~~~~  183 (352)
T cd06174         162 LGLLLALLLLFLL----------------------------------------------------------RLLLLLALA  183 (352)
T ss_pred             HHHHHHHHHHHHH----------------------------------------------------------HHHHHHHHH
Confidence            7666555543332                                                          023333344


Q ss_pred             HHHHHHHHHHHHhhhhhhhhhc-CcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhH-HHHHHHHH
Q 045073          162 WFLLDIAFYTINLAQKDIYPAT-GIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFI-IQLGGFLL  239 (402)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~-~~~~~~~~  239 (402)
                      .+...........+.|.+.++. +.+..+.+.            ......++.+++.++.+++.||+|||+ .+..+..+
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  251 (352)
T cd06174         184 FFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGL------------LLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLL  251 (352)
T ss_pred             HHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence            4444555666677778887764 777766554            777788889999999999999999999 88888877


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH
Q 045073          240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA  319 (402)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~  319 (402)
                      ..++.+.....                     .+ .....+.....+.......+...++..|..|++.|++..|+.+..
T Consensus       252 ~~i~~~~~~~~---------------------~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (352)
T cd06174         252 AALGLLLLALA---------------------PS-LALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTF  309 (352)
T ss_pred             HHHHHHHHHHh---------------------cc-HHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHH
Confidence            77776666543                     22 223333333344444556677888999999999999999999999


Q ss_pred             HHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073          320 GKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV  363 (402)
Q Consensus       320 ~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~  363 (402)
                      ..++..+++.+.+.+.+..  +++..+.+.+++.+++.++.+++
T Consensus       310 ~~~~~~i~~~i~g~l~~~~--~~~~~~~~~~~~~~i~~i~~~~~  351 (352)
T cd06174         310 GSLGGALGPLLAGLLLDTG--GYGGVFLILAALALLAALLLLLL  351 (352)
T ss_pred             HHHHHHHHHHHHHHHhccc--CcchHHHHHHHHHHHHHHHheec
Confidence            9999999999999998766  88899999999888887776543

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3

>TIGR00900 2A0121 H+ Antiporter protein

Probab=99.81  E-value=4.6e-18  Score=155.74  Aligned_cols=250  Identities=10%  Similarity=0.044  Sum_probs=161.5

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      +...+++.|++|+++|+++.++.+.+..+|.++++.+++.+.                       +..+||+.|++.++.
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~-----------------------~~~g~~~~~~~~~~~  167 (365)
T TIGR00900       111 PAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMY-----------------------ATLGIKWAIWVDAVG  167 (365)
T ss_pred             HHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-----------------------HHhhHHHHHHHHHHH
Confidence            456788999999999999999999999999999999999886                       557899999987766


Q ss_pred             HHHHHHHHhh--ccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHH
Q 045073           83 AALTYYWRMK--MPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTS  160 (402)
Q Consensus        83 ~~~~~~~~~~--~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (402)
                      .++..+..++  .||.++.  .+++.+++..++.                         .+.++ ..+++  +.+.....
T Consensus       168 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-------------------------~~~~~-~~~~~--~~~~~~~~  217 (365)
T TIGR00900       168 FAISALLIVSVRIPELAAS--EIQALSNAVLRDT-------------------------REGIK-FVLKN--PLLRTLLL  217 (365)
T ss_pred             HHHHHHHHHhcccccCCCc--cccccchhHHHHH-------------------------HhHHH-HHHcC--cHHHHHHH
Confidence            6655444333  3433221  0000000000000                         00001 11111  12222222


Q ss_pred             HHHHHHHHHHHHH-hhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHH
Q 045073          161 TWFLLDIAFYTIN-LAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFL  238 (402)
Q Consensus       161 ~~~~~~~~~~~~~-~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~  238 (402)
                      ..+......+... .+.|.+.++ .|.+..+.+.            ......++.+++.++.+++.||++||+.+..+..
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  285 (365)
T TIGR00900       218 LALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGW------------VLAAFGLGALLGALLLGLLGRYFKRMALMTGAIF  285 (365)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHH
Confidence            2233333333333 566777765 6777766544            6666778888899999999999999998887766


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHH
Q 045073          239 LMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAA  318 (402)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~  318 (402)
                      +.+++...+...                     ..+.....+..+..++......+...++..|..|++.|+++.|+.+.
T Consensus       286 ~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  344 (365)
T TIGR00900       286 VIGLAILVVGLT---------------------PPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFS  344 (365)
T ss_pred             HHHHHHHHHHhh---------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence            666555544432                     11122222223333333334455677888999999999999999999


Q ss_pred             HHHHhHHHHhHhHHhhhhcc
Q 045073          319 AGKAGAIVGAFGVQYYTQKG  338 (402)
Q Consensus       319 ~~~~g~~i~~~~~~~~~~~~  338 (402)
                      ...++..+++.+.+.+.+..
T Consensus       345 ~~~~~~~~g~~~~g~l~~~~  364 (365)
T TIGR00900       345 LSHAAWPLGLILAGPLADHL  364 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHHc
Confidence            99999999999999988753

>PRK09874 drug efflux system protein MdtG; Provisional

Probab=99.81  E-value=4e-18  Score=158.73  Aligned_cols=272  Identities=12%  Similarity=0.034  Sum_probs=167.3

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      +....++.|..|+++|+++.++...+..+|.++++.+++.+.                       +..+||+.|++.++.
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~-----------------------~~~~~~~~~~~~~~~  181 (408)
T PRK09874        125 PNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLA-----------------------DSYGLRPVFFITASV  181 (408)
T ss_pred             HhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------HHhCHHHHHHHHHHH
Confidence            344567889999999999999999999999999999998886                       556899999987766


Q ss_pred             HHHHHH-HHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073           83 AALTYY-WRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST  161 (402)
Q Consensus        83 ~~~~~~-~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (402)
                      .++..+ ..+++||.++.  . +++++...++.                             .....++  +........
T Consensus       182 ~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~-----------------------------~~~~~~~--~~~~~~~~~  227 (408)
T PRK09874        182 LFLCFLVTLFCIRENFQP--V-SKKEMLHMREV-----------------------------VTSLKNP--KLVLSLFVT  227 (408)
T ss_pred             HHHHHHHHHHHhccCccc--c-cchhhhHHHHH-----------------------------HHhCcCC--chHHHHHHH
Confidence            655443 44556765422  0 11000000000                             0000011  011111111


Q ss_pred             HHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHH
Q 045073          162 WFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMS  241 (402)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~  241 (402)
                      .+...........+.+.+..+.+.+..+...        ..........++.+++.+..|+++||+|||+.+..+..+..
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~  299 (408)
T PRK09874        228 TLIIQVATGSIAPILTLYVRELAGNVSNIAF--------ISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSV  299 (408)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccchHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHH
Confidence            1111122223333445555543322221111        11223444566777788889999999999999888776655


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHH
Q 045073          242 ICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGK  321 (402)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~  321 (402)
                      ++.+.....                     .+. ....+.....+.+.....+...++..+..|++.|++..++.+....
T Consensus       300 ~~~~~~~~~---------------------~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  357 (408)
T PRK09874        300 LLLIPMSFV---------------------QTP-LQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRD  357 (408)
T ss_pred             HHHHHHHHh---------------------ccH-HHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHH
Confidence            544433321                     111 2222222222333333445555666788899999999999999999


Q ss_pred             HhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073          322 AGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV  363 (402)
Q Consensus       322 ~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~  363 (402)
                      +|..++|.+.+.+.+..  +++..|.+.+++.+++.+..++.
T Consensus       358 ~g~~~gp~~~G~l~~~~--g~~~~f~~~~~~~l~~~~~~~~~  397 (408)
T PRK09874        358 IGNVTGPLMGAAISANY--GFRAVFLVTAGVVLFNAVYSWNS  397 (408)
T ss_pred             HHHHhhHHHHHHHHhhc--chhHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999998877  88999999988888877766543

>PRK12382 putative transporter; Provisional

Probab=99.81  E-value=5.8e-18  Score=156.67  Aligned_cols=257  Identities=12%  Similarity=0.012  Sum_probs=164.6

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      +...+++.|+.|+++|++++++.+.+..+|.++++.+++.+.                       ...|||+.+.+..+.
T Consensus       131 ~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~-----------------------~~~g~~~~~~~~~~~  187 (392)
T PRK12382        131 TGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLH-----------------------SHFGFAALALTTMVL  187 (392)
T ss_pred             HHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHH-----------------------hccChHHHHHHHHHH
Confidence            344567889999999999999999999999999999998876                       557899887765554


Q ss_pred             HHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073           83 AALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW  162 (402)
Q Consensus        83 ~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (402)
                      .++.+......||.+..    ++++                             .+.    ++ ..+..++....    .
T Consensus       188 ~~~~~~~~~~~~~~~~~----~~~~-----------------------------~~~----~~-~~~~~~~~~~~----~  225 (392)
T PRK12382        188 PLLAWAFNGTVRKVPAH----AGER-----------------------------PSL----WS-VVGLIWKPGLG----L  225 (392)
T ss_pred             HHHHHHHHHhccCCCCC----cccC-----------------------------chH----HH-HHHHHHHhHHH----H
Confidence            44433332233432210    0000                             000    00 01111111111    1


Q ss_pred             HHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHH
Q 045073          163 FLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSI  242 (402)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~  242 (402)
                      ............+.|.++++.+++..  +.            ......++.+++.++.|++.||+|+|+.+..+..+.++
T Consensus       226 ~l~~~~~~~~~~~~~~~~~~~~~~~~--~~------------~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~  291 (392)
T PRK12382        226 ALQGVGFAVIGTFVSLYFASKGWAMA--GF------------TLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETV  291 (392)
T ss_pred             HHHHHHHhHHHHHHHHHHHhcCCchh--HH------------HHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHH
Confidence            11222333445566666666665432  11            33345566778888999999999999988888777666


Q ss_pred             HHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHH
Q 045073          243 CMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKA  322 (402)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~  322 (402)
                      +.+++...                     .+.+.... .....+.......+...+...|.+|++.|+++.|+.+....+
T Consensus       292 ~~~~~~~~---------------------~~~~~~~~-~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~  349 (392)
T PRK12382        292 GLLLLWLA---------------------PTAWVALA-GAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDI  349 (392)
T ss_pred             HHHHHHHc---------------------ccHHHHHH-HHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence            65544431                     12222222 222222222233345556678889999999999999999999


Q ss_pred             hHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheee
Q 045073          323 GAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFM  362 (402)
Q Consensus       323 g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~  362 (402)
                      |..++|.+.+.+.+..  +|+..|.+.+++.+++.++.++
T Consensus       350 g~~ig~~~~g~l~~~~--g~~~~~~~~~~~~~~~~~~~~~  387 (392)
T PRK12382        350 AYGVSGPLAGMLATSF--GYPSVFLAGAISAVLGIIVTIL  387 (392)
T ss_pred             HHHHHHHHHHHHHHHh--CchHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999887  8999999988888877766553

>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=99.80  E-value=3.4e-19  Score=165.10  Aligned_cols=194  Identities=14%  Similarity=0.186  Sum_probs=134.1

Q ss_pred             CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073            2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV   81 (402)
Q Consensus         2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i   81 (402)
                      ||....+++-|+.+++||+.++++.++.++|.++|+++++.+.+..+.                 ....||||.|++.++
T Consensus       152 wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~-----------------~~~~gW~~~FiI~G~  214 (495)
T KOG2533|consen  152 WPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGS-----------------GGLAGWRWLFIIEGV  214 (495)
T ss_pred             chHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCC-----------------CCcCCceeehhHHHH
Confidence            688899999999999999999999999999999999999997642221                 256899999999665


Q ss_pred             HHHH-HHHHHhhccCCch--hHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHH
Q 045073           82 PAAL-TYYWRMKMPETAR--YTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGT  158 (402)
Q Consensus        82 ~~~~-~~~~~~~~pesp~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (402)
                      +.++ +++.++++|+.|.  +... +++++-..+++++..+   +.         ..++..+..+++..+.   ..++..
T Consensus       215 i~~~~gi~~f~~lp~~P~~~~fl~-~~ek~~~~~~~~~~~~---~~---------~~~~~~~~~~~~a~~d---p~vw~~  278 (495)
T KOG2533|consen  215 ITLVLGIVVFFFLPDNPSKAWFLT-DEEKELVVERLRESPS---GG---------IENKFKWKGFKEALKD---PGVWPF  278 (495)
T ss_pred             HHHHHHheEEEEecCChhhccccc-hHHHHHHHHHHHhccC---CC---------cccccCHHHHHHHHhc---hhHHHH
Confidence            5554 6666777999997  3211 1111101111111000   00         0000111222222222   267888


Q ss_pred             HHHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhc----cchhHHH
Q 045073          159 TSTWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDR----IGRFIIQ  233 (402)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr----~grr~~~  233 (402)
                      ++..++.....++...|+|.++++ .|++..+++.            +.++..++.+++.+++|+++||    ..+|...
T Consensus       279 ~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~------------ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~  346 (495)
T KOG2533|consen  279 SLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANL------------LSTPYDVGGIVGLILAGYLSDRLKTIFARRLLF  346 (495)
T ss_pred             HHHHHHHhhccccHHHHHHHHHHcCCCcChHHhcc------------ccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHH
Confidence            888888889999999999999988 5688877665            8888999999999999999999    5566555


Q ss_pred             HHHHHHH
Q 045073          234 LGGFLLM  240 (402)
Q Consensus       234 ~~~~~~~  240 (402)
                      .....+.
T Consensus       347 ~~~~~~~  353 (495)
T KOG2533|consen  347 IVFLCLY  353 (495)
T ss_pred             HHHHHHH
Confidence            5544433

>TIGR00897 2A0118 polyol permease family

Probab=99.80  E-value=1.5e-17  Score=154.22  Aligned_cols=272  Identities=9%  Similarity=-0.023  Sum_probs=161.8

Q ss_pred             chhhhhhccCcccchhHHHHHHHHHHHHH-HHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHH
Q 045073            5 SAVIMSEYANKRTRGAFIAAVFAMQGMGI-LFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPA   83 (402)
Q Consensus         5 ~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~   83 (402)
                      ..+++.|+.|+++|++++++.+.+.++|. ++++.+++.+.                       +..||+..++......
T Consensus       126 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~-----------------------~~~g~~~~~~~~~~~~  182 (402)
T TIGR00897       126 FLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAI-----------------------PAFGEMNTLWSALAFV  182 (402)
T ss_pred             HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----------------------cccchHHHHHHHHHHH
Confidence            44667899999999999999999999997 57888887765                       4456554444322222


Q ss_pred             HH-HHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073           84 AL-TYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW  162 (402)
Q Consensus        84 ~~-~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (402)
                      ++ .++..++.+|.++.  .+++++++ .+                         +..+.++ ...++  +.++...+..
T Consensus       183 ~~~~~~~~~~~~~~~~~--~~~~~~~~-~~-------------------------~~~~~~~-~~~~~--~~~~~~~~~~  231 (402)
T TIGR00897       183 LTGGVIALFSNKDIFTP--QHMQTREK-FS-------------------------ELGKAAT-ILFTN--PNVLLGGMVR  231 (402)
T ss_pred             HHHHHHHHhccCCCCCc--ccccCCcc-hh-------------------------hHHHHHH-HHHcC--hhHHHHHHHH
Confidence            22 22223334443210  00000000 00                         0000001 11111  2344444445


Q ss_pred             HHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHH-HHHHHHH
Q 045073          163 FLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQL-GGFLLMS  241 (402)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~-~~~~~~~  241 (402)
                      ++.....++...+.|.+.++.|++..+.+.            ......++.+++.++.|+++||++||+.+. .+.+..+
T Consensus       232 ~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~------------~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~  299 (402)
T TIGR00897       232 IINTIGLFGFAVFLPMFVAELGFSTSEWLQ------------IWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCG  299 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCChhHHHH------------HHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHH
Confidence            555667778888999999888888776443            555667788899999999999999887654 2323333


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHH
Q 045073          242 ICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGK  321 (402)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~  321 (402)
                      ++.+.+.......                 .+......+..+..+....+..+ ......|..| +.|+++.|+.+....
T Consensus       300 ~~~~~l~~~~~~~-----------------~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~  360 (402)
T TIGR00897       300 IFTLALYYIPQHF-----------------GHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAG  360 (402)
T ss_pred             HHHHHHHHHHHcc-----------------CCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHH
Confidence            3322222211100                 11112222222222222222222 2344567655 589999999999999


Q ss_pred             HhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073          322 AGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV  363 (402)
Q Consensus       322 ~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~  363 (402)
                      +++.++|.+.+.+.+..  ++..++++.+++.+++.++..++
T Consensus       361 lg~~~gp~i~g~l~~~~--g~~~~~~~~a~~~~i~~~~~~~~  400 (402)
T TIGR00897       361 LSAFLAPAIAVLFIGFF--GAIGVVWIFAALYVVSAFLTAFI  400 (402)
T ss_pred             HHHHHHHHHHHHHHhhc--chHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999987  88889998888888777666554

This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.

>PRK10504 putative transporter; Provisional

Probab=99.80  E-value=1.3e-17  Score=158.12  Aligned_cols=276  Identities=11%  Similarity=0.061  Sum_probs=160.1

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      |...+++.|++|+++|+++.++......+|..+++.+++.+.                       +..+||+.|++..+.
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~-----------------------~~~gw~~~f~~~~~~  173 (471)
T PRK10504        117 PVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLV-----------------------EYASWHWIFLINIPV  173 (471)
T ss_pred             HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-----------------------hhccHHHHHHHHHHH
Confidence            456678899999999999999999999999999999999887                       567899999987766


Q ss_pred             HHHHHHHH-hhccCCchhHHhhhCChhHHHHHH------HHhccccccccccCCCC----------------CCCCCccc
Q 045073           83 AALTYYWR-MKMPETARYTALVEGNQKKAAVDM------AKVLDTDLTVATSAYPV----------------PVSPEAST  139 (402)
Q Consensus        83 ~~~~~~~~-~~~pesp~~l~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~----------------~~~~~~~~  139 (402)
                      .++..+.. ...|+.+.-    ..+.+......      .-....+..+.......                ..+++...
T Consensus       174 ~~l~~~~~~~~~~~~~~~----~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (471)
T PRK10504        174 GIIGAIATLMLMPNYTMQ----TRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNN  249 (471)
T ss_pred             HHHHHHHHHHhCCCcccc----CCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            65544433 345554311    11111100000      00000000000000000                00000000


Q ss_pred             cccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhh
Q 045073          140 YGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYW  218 (402)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  218 (402)
                      .+.+..+.++++  .+.......+...........+.|.+++. .|.++...+.            ......++.+++.+
T Consensus       250 ~~~~~~~l~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~------------~~~~~~~~~~~~~~  315 (471)
T PRK10504        250 RALFSLKLFRTR--TFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGL------------MMIPMVLGSMGMKR  315 (471)
T ss_pred             CCccCHHHhccc--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHH
Confidence            011111122221  22222333333333444455567777764 7887765544            55666777777778


Q ss_pred             hHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccc
Q 045073          219 FTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFI  298 (402)
Q Consensus       219 ~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (402)
                      +.+++.||+|||+++..+..+.++...++.....                   ........+.....+.......+....
T Consensus       316 ~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~  376 (471)
T PRK10504        316 IVVQVVNRFGYRRVLVATTLGLALVSLLFMLVAL-------------------LGWYYLLPFVLFLQGMVNSTRFSSMNT  376 (471)
T ss_pred             HHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccc-------------------cccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8999999999999998887766666554443210                   111121111122221222222334556


Q ss_pred             ccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhcc
Q 045073          299 VPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKG  338 (402)
Q Consensus       299 ~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~  338 (402)
                      +..+..|++.|+++.|+.++...+|..+|+.+.+.+.+..
T Consensus       377 ~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~  416 (471)
T PRK10504        377 LTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLF  416 (471)
T ss_pred             HHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            6778899999999999999999999999999988887655

>TIGR00881 2A0104 phosphoglycerate transporter family protein

Probab=99.79  E-value=2.4e-18  Score=158.33  Aligned_cols=274  Identities=13%  Similarity=0.168  Sum_probs=161.2

Q ss_pred             CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHH-HHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhH
Q 045073            2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAG-VISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGA   80 (402)
Q Consensus         2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~   80 (402)
                      ++...+++.|++|+++|++++++.+.+..+|..+++ .++..+.                       ...+||+.|++.+
T Consensus       101 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~  157 (379)
T TIGR00881       101 WPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIA-----------------------ELYSWHWVFIVPG  157 (379)
T ss_pred             CCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHH-----------------------hcCCchhHHHHHH
Confidence            466788999999999999999999999999999999 4665554                       5578999998866


Q ss_pred             HHHHH-HHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHH
Q 045073           81 VPAAL-TYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTT  159 (402)
Q Consensus        81 i~~~~-~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (402)
                      +..++ .++..+++||+|+...  .++.++.           ..++.++.++.++++...++...+...++  +.++...
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  222 (379)
T TIGR00881       158 IIAIIVSLICFLLLRDSPQSCG--LPPAEEM-----------PNEEPDGDAEKKEEELTKKQIFLQYVLLN--KVLWYIS  222 (379)
T ss_pred             HHHHHHHHHHheeeCCCccccc--cCccccC-----------cccccccccccccccccchHHHHHHHHhc--chHHHHH
Confidence            65554 4455556788765311  0000000           00000000000000011111111111121  2344444


Q ss_pred             HHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccch-hHHHHHHH
Q 045073          160 STWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGR-FIIQLGGF  237 (402)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~gr-r~~~~~~~  237 (402)
                      +..+......+....+.|.++.+ .|++..+.+.            ......++.+++.++.+++.||..+ |+.... .
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------------~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~-~  289 (379)
T TIGR00881       223 LGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASW------------AFTLYELGGLVGTLLAGWLSDKLFNGRRGPLA-V  289 (379)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH------------HHHHHHHHcchhHHHHHHHHHHHcCCcchHHH-H
Confidence            44444455556667778887754 6887776554            6667778889999999999998643 332221 1


Q ss_pred             HHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHH
Q 045073          238 LLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISA  317 (402)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~  317 (402)
                      .........+....  ....              .+ .....+.....+....+..+....+..|.+|++.|+++.|+.+
T Consensus       290 ~~~~~~~~~~~~~~--~~~~--------------~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~  352 (379)
T TIGR00881       290 FFMALIIVSLLVYW--LNPA--------------AN-PLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVG  352 (379)
T ss_pred             HHHHHHHHHHHHHh--cCcc--------------hh-HHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHH
Confidence            11111111111111  0000              11 1222222222232233444455667899999999999999999


Q ss_pred             HHHHHhHHHHhHhHHhhhhccCCcchhh
Q 045073          318 AAGKAGAIVGAFGVQYYTQKGDKQIKQS  345 (402)
Q Consensus       318 ~~~~~g~~i~~~~~~~~~~~~~~~~~~~  345 (402)
                      ....+|+.++|.+.+.+.+..  +|+..
T Consensus       353 ~~~~~g~~~~~~~~g~l~~~~--g~~~~  378 (379)
T TIGR00881       353 FFAYLGGILAGLPLGYLADGF--GWAGA  378 (379)
T ss_pred             HhhhhhhhhhhhhHHHHHHhh--ccccc
Confidence            999999999999999999877  66543

>PRK10091 MFS transport protein AraJ; Provisional

Probab=99.79  E-value=2.2e-17  Score=152.12  Aligned_cols=260  Identities=12%  Similarity=0.101  Sum_probs=158.0

Q ss_pred             cchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHH
Q 045073            4 LSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPA   83 (402)
Q Consensus         4 ~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~   83 (402)
                      ...+++.|++|+++|++++++...+..+|..+++.+++.+.                       +..+||+.|++.++..
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~-----------------------~~~gwr~~f~~~~~~~  167 (382)
T PRK10091        111 VGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLS-----------------------QEFSWRYTFLLIAVFN  167 (382)
T ss_pred             HHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHh-----------------------hhccHHHHHHHHHHHH
Confidence            34567889999999999999999999999999999988876                       5578999999977665


Q ss_pred             HHHH-HHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073           84 ALTY-YWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW  162 (402)
Q Consensus        84 ~~~~-~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (402)
                      ++.. ...+++||.++-    ++.+.+  +                          .    .+ ..++.  ..+......
T Consensus       168 ~~~~~~~~~~lp~~~~~----~~~~~~--~--------------------------~----~~-~~~~~--~~~~~~~~~  208 (382)
T PRK10091        168 IAVLASIYFWVPDIRDE----AKGGLR--E--------------------------Q----FH-FLRSP--APWLIFAAT  208 (382)
T ss_pred             HHHHHHHHHhCCCCCcc----cccCHH--H--------------------------H----HH-HhcCh--HHHHHHHHH
Confidence            5543 344557875421    100000  0                          0    01 11111  112222222


Q ss_pred             HHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHH
Q 045073          163 FLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMS  241 (402)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~  241 (402)
                      +......+....+.+.++. ..|+++.+.+.            ......++.+++.++.+++.||+|+|+.+..+..+.+
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~------------~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~  276 (382)
T PRK10091        209 MFGNAGVFAWFSYIKPYMMFISGFSETSMTF------------IMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIV  276 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHH
Confidence            2222233333334444444 47888776554            6777788899999999999999999998888777666


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcc-ccccccccccccchhhhhhhHHHHHH
Q 045073          242 ICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNS-TTFIVPAELFPARLRSTCHGISAAAG  320 (402)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~p~~~r~~~~~~~~~~~  320 (402)
                      ++.+++....                    ...+.......+. ..+..+..+ .......+..|.+.++.+  ..+...
T Consensus       277 i~~~~~~~~~--------------------~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  333 (382)
T PRK10091        277 LALLMLFFFG--------------------GMKTASLIFAFIC-CAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAF  333 (382)
T ss_pred             HHHHHHHHHH--------------------hhHHHHHHHHHHH-HHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHH
Confidence            6654443321                    1111222211111 111112222 222233454555555554  346678


Q ss_pred             HHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee
Q 045073          321 KAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF  361 (402)
Q Consensus       321 ~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~  361 (402)
                      .+|..+||.+.+.+.+... ++...+.+.++++++......
T Consensus       334 ~~g~~~Gp~~~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~  373 (382)
T PRK10091        334 NLGSAIGAYCGGMMLTLGL-AYNYVALPAALLSFAAMSSLL  373 (382)
T ss_pred             HHHHHHHHHHhHHHHHccc-CcchHHHHHHHHHHHHHHHHH
Confidence            8999999999999998643 788888877766665554444

>PRK10213 nepI ribonucleoside transporter; Reviewed

Probab=99.79  E-value=5.4e-17  Score=149.90  Aligned_cols=255  Identities=13%  Similarity=0.111  Sum_probs=155.8

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      |...+++.|++|+++|+++.++...+.++|.++++.+++.+.                       +..+||+.|++.++.
T Consensus       127 ~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~-----------------------~~~gw~~~f~~~~~l  183 (394)
T PRK10213        127 AMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLG-----------------------ELIGWRNVFNAAAVM  183 (394)
T ss_pred             HHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------hhcCHHHHHHHHHHH
Confidence            456788999999999999999999999999999999999886                       567899999987666


Q ss_pred             HHHHHHH-HhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073           83 AALTYYW-RMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST  161 (402)
Q Consensus        83 ~~~~~~~-~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (402)
                      +++..+. ...+||+|+.    ++...+                            ..    ++..+++   .++.....
T Consensus       184 ~~~~~l~~~~~~p~~~~~----~~~~~~----------------------------~~----~~~l~~~---~~~~~~~~  224 (394)
T PRK10213        184 GVLCIFWIIKSLPSLPGE----PSHQKQ----------------------------NT----FRLLQRP---GVMAGMIA  224 (394)
T ss_pred             HHHHHHHHHHHCCCCCcc----cccchh----------------------------HH----HHHhcCH---HHHHHHHH
Confidence            6554433 3346775421    000000                            00    1111111   22222222


Q ss_pred             HHHHHHHHHHHHhhh-hhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHH
Q 045073          162 WFLLDIAFYTINLAQ-KDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM  240 (402)
Q Consensus       162 ~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~  240 (402)
                      .+......+....+. |.+.++.|++....+.            ......++.+++.++.+++.||.+++.... +..+.
T Consensus       225 ~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~------------~~~~~~~~~iig~~~~~~l~~r~~~~~l~~-~~~~~  291 (394)
T PRK10213        225 IFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTL------------VLLSFGIASFVGTSLSSFILKRSVKLALAG-APLVL  291 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCChhHHHH------------HHHHHHHHHHHHHHHHHHHHhccchhHHHH-HHHHH
Confidence            222223334444444 6677778888776554            566677788889999999999965443333 33332


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHH
Q 045073          241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAG  320 (402)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~  320 (402)
                      ..+..++....                    .+. ..+....+..++......+...+++.+..| +.++...++.....
T Consensus       292 ~~~~~~l~~~~--------------------~~~-~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  349 (394)
T PRK10213        292 AVSALVLTLWG--------------------SDK-IVATGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVI  349 (394)
T ss_pred             HHHHHHHHHHh--------------------hhH-HHHHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHH
Confidence            22222222211                    111 222222222232233333444446677777 44567777777888


Q ss_pred             HHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHH
Q 045073          321 KAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLG  356 (402)
Q Consensus       321 ~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  356 (402)
                      .+|..+|+.+.+.+.+..  ++...+...+++.++.
T Consensus       350 ~lg~~~G~~l~G~l~~~~--g~~~~~~~~~~~~~~~  383 (394)
T PRK10213        350 QLANTCGAAIGGYALDNI--GLTSPLMLSGTLMLLT  383 (394)
T ss_pred             HHHHHHHHHHHHHHHhcc--ChhhHHHHHHHHHHHH
Confidence            899999999999999976  7777666665554443

>PRK11902 ampG muropeptide transporter; Reviewed

Probab=99.79  E-value=6e-17  Score=150.32  Aligned_cols=272  Identities=13%  Similarity=0.057  Sum_probs=159.9

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCC-CchhHHHHHHhHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQG-DYLWRIVLMFGAV   81 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Wr~~f~~~~i   81 (402)
                      |...+++.|+.|+++|+++.++...+..+|.++++.++..+.                       + ..|||..|++.++
T Consensus       113 ~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~-----------------------~~~~gw~~~f~i~a~  169 (402)
T PRK11902        113 IVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLA-----------------------DRVLGWGNTYLLMAG  169 (402)
T ss_pred             HHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHH-----------------------hcccCHHHHHHHHHH
Confidence            345678899999999999999999999999999999988876                       3 3589999999777


Q ss_pred             HHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhh-hHHHHHHHH
Q 045073           82 PAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKH-GLHLLGTTS  160 (402)
Q Consensus        82 ~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  160 (402)
                      ..++..+..+++||+++.    ++++++..++.                         .+.++ ..++++ .+..+...+
T Consensus       170 ~~l~~~l~~~~~~e~~~~----~~~~~~~~~~~-------------------------~~~~~-~l~~~~~~~~~l~~~~  219 (402)
T PRK11902        170 LMLAGALTTLWAPEPEVP----ARPPRSLGEAV-------------------------VGPLR-DFFSRRGAWALLLLIV  219 (402)
T ss_pred             HHHHHHHHHHhcCCCccc----ccccchhHHHH-------------------------HHHHH-HHHhCcCHHHHHHHHH
Confidence            666655555667886543    11111000000                         00011 122221 111222222


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHH-HHHHhhhhhhhhhHHHhhhccchhHHHHHHHHH
Q 045073          161 TWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMF-LVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL  239 (402)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~  239 (402)
                      .........+  ....+.+.++.|+++.+.+.            .. ....++.+++.++++++.||+|||+.+..+..+
T Consensus       220 l~~~~~~~~~--~~~~~~l~~~~G~~~~~~g~------------~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~  285 (402)
T PRK11902        220 LYKLGDAFAG--SLSTTFLIRGAGFSAGEVGI------------VNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVL  285 (402)
T ss_pred             HHHhHHHHHH--HHHHHHHHHhcCCCHHHHHH------------HHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence            2111111111  12223344557888776443            33 333456788889999999999999887766655


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHH---HHHHHHhhCCccccccccccccccchhhhhhhHH
Q 045073          240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYG---LTLFFANFGPNSTTFIVPAELFPARLRSTCHGIS  316 (402)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~  316 (402)
                      ..+..+.+...... .                .+.+.......   +..+.......+....++.+.+|.+.+    ++.
T Consensus       286 ~~l~~l~~~~~~~~-~----------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~  344 (402)
T PRK11902        286 QAVSNLGYWVLAVT-P----------------KHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQY----ALL  344 (402)
T ss_pred             HHHHHHHHHHHHhc-C----------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHH
Confidence            55444333221110 0                11122222111   122222233344556667777775554    455


Q ss_pred             HHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeee
Q 045073          317 AAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVP  364 (402)
Q Consensus       317 ~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~  364 (402)
                      +....++..+++.+.+.+.+..  |++..|.+.+++++++.++.+..+
T Consensus       345 ~~~~~l~~~~~~~~~G~l~~~~--G~~~~f~~~~~~~~~~~~~~~~~~  390 (402)
T PRK11902        345 SALASVGRVYVGPTSGYLVEAY--GWPGFYLMTVVIALPGLALLWLMR  390 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHh--ChHHHHHHHHHHHHHHHHHHHHHh
Confidence            5555667766666888888888  899999999888888877765443

>TIGR00901 2A0125 AmpG-related permease

Probab=99.77  E-value=3.6e-17  Score=149.41  Aligned_cols=252  Identities=10%  Similarity=0.004  Sum_probs=152.7

Q ss_pred             cchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHH
Q 045073            4 LSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPA   83 (402)
Q Consensus         4 ~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~   83 (402)
                      ...+++.|++|+++|+++.++...+..+|.++++.+++.+....+.+               ....++||..|++.++..
T Consensus       103 ~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~---------------~~~~~~wr~~f~i~ai~~  167 (356)
T TIGR00901       103 ALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFAN---------------TGLITLWGYIFFWTALLI  167 (356)
T ss_pred             HHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccc---------------cccccccHHHHHHHHHHH
Confidence            44678999999999999999999999999999999998886432211               113566999999988877


Q ss_pred             HHHHHHHhh-ccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073           84 ALTYYWRMK-MPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW  162 (402)
Q Consensus        84 ~~~~~~~~~-~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (402)
                      ++.++..++ .||+++.    ++.+++..++.                         ++.++....++..+.++...+..
T Consensus       168 l~~~~~~~~~~~e~~~~----~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~  218 (356)
T TIGR00901       168 LPGLLVTLFLAKEPQED----ASVPKPLTQAV-------------------------LKPIREFFQRKNMIQALLLLLLI  218 (356)
T ss_pred             HHHHHHHHHhccCCCcc----cccchhHHHHH-------------------------HHHHHHHHHhcCchHHHHHHHHH
Confidence            776655544 5775321    00000000000                         00011111111111233333344


Q ss_pred             HHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHH
Q 045073          163 FLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSI  242 (402)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~  242 (402)
                      +.....++....+.|.+.++.|+++.+.+.           .......++.+++.++++++.||+|||+.+..+.++.++
T Consensus       219 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~-----------~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~  287 (356)
T TIGR00901       219 VLYKLGDSAATVLTTLFLLDMGFSKEEIAL-----------VAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQAL  287 (356)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-----------HhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence            444556667777888888888888876443           122333456778889999999999999988888777666


Q ss_pred             HHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHH
Q 045073          243 CMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGK  321 (402)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~  321 (402)
                      ...+..+........+          + +....+......+...+......+...++..|.+|++.||+..|+.+...+
T Consensus       288 ~~~~~~~~~~~~~~~~----------~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~  355 (356)
T TIGR00901       288 TNAGFVWLASNGHHDG----------I-TFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA  355 (356)
T ss_pred             HHHHHHHHHhcCcccc----------c-ccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence            5554443211000000          0 001222222223232333334455678889999999999999999877653

>PRK14995 methyl viologen resistance protein SmvA; Provisional

Probab=99.76  E-value=8.7e-17  Score=152.97  Aligned_cols=271  Identities=13%  Similarity=0.083  Sum_probs=165.0

Q ss_pred             hhhhhhc-cCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHH
Q 045073            6 AVIMSEY-ANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAA   84 (402)
Q Consensus         6 ~~~i~e~-~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~   84 (402)
                      ...+.+. .|+++|++++++......+|..++|.+++.+.                       +..+||+.|++....++
T Consensus       116 ~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~-----------------------~~~gwr~~f~i~~~~~~  172 (495)
T PRK14995        116 LAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILL-----------------------EHFYWGSVFLINVPIVL  172 (495)
T ss_pred             HHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----------------------ccCChHHHHHHHHHHHH
Confidence            3445555 47899999999999999999999999999987                       66899999999776666


Q ss_pred             HHH-HHHhhccCCchhHHhhhCChhHHHHHHHH-------hccccccccccCCCC-----------------CCCCCccc
Q 045073           85 LTY-YWRMKMPETARYTALVEGNQKKAAVDMAK-------VLDTDLTVATSAYPV-----------------PVSPEAST  139 (402)
Q Consensus        85 ~~~-~~~~~~pesp~~l~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-----------------~~~~~~~~  139 (402)
                      +.+ +..+++||+|..    ++++.+....+..       ....+.. .......                 ...+.+..
T Consensus       173 ~~~~l~~~~l~~~~~~----~~~~~d~~g~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~  247 (495)
T PRK14995        173 VVMGLTARYVPRQAGR----RDQPLNLGHALMLIVAILLLVYSAKTA-LKGFLSLWVTSLTLLTGALLLGLFIRTQLAAS  247 (495)
T ss_pred             HHHHHHHHhCCCCCCC----CCCCCChHhHHHHHHHHHHHHHHHHhc-cccCCchHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            543 444567886532    1111111111000       0000000 0000000                 00000000


Q ss_pred             cccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhh
Q 045073          140 YGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYW  218 (402)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  218 (402)
                      ...+..+.+++  +.+.......+......++...+.|.+++. .|+++.+++.            ......++..++.+
T Consensus       248 ~p~~~~~lf~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~------------~~~~~~~~~~~~~~  313 (495)
T PRK14995        248 RPMIDMRLFTH--RIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGM------------FMLPVMVASGFSGP  313 (495)
T ss_pred             CCCcCHHHhCC--cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHH
Confidence            11111122222  123333344444455566677788888876 7888887665            77778888889999


Q ss_pred             hHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccc
Q 045073          219 FTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFI  298 (402)
Q Consensus       219 ~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (402)
                      +.|++.||+|+|+.+..+..+.+++.+.+.....    .              .+.+. .....+..+++.....+....
T Consensus       314 ~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~----~--------------~~~~~-~~~~~~l~G~g~g~~~~~~~~  374 (495)
T PRK14995        314 IAGILVSRLGLRLVATGGMALSALSFYGLAMTDF----S--------------TQQWQ-AWGLMALLGFSAASALLASTS  374 (495)
T ss_pred             HHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcC----C--------------CchHH-HHHHHHHHHHhHHHHHHHHHH
Confidence            9999999999999888887776666554443211    0              11222 222222223222233334555


Q ss_pred             ccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhc
Q 045073          299 VPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQK  337 (402)
Q Consensus       299 ~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~  337 (402)
                      ...+..|++.++.+.++.+....+|+.+|+.+.+.+.+.
T Consensus       375 ~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~  413 (495)
T PRK14995        375 AIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLSR  413 (495)
T ss_pred             HHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            667889999999999999999999999999988887653

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily

Probab=99.76  E-value=2.9e-16  Score=145.01  Aligned_cols=247  Identities=13%  Similarity=0.090  Sum_probs=152.5

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      +...+++.|++|+++|+++.++.+....+|..+++.+++.+.                       +..+||+.|++.++.
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~-----------------------~~~~~~~~~~~~~~~  168 (385)
T TIGR00710       112 VISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYIL-----------------------VWLSWHAIFAFLSLA  168 (385)
T ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------HHcCHHHHHHHHHHH
Confidence            345678999999999999999999999999999999998876                       557899999986666


Q ss_pred             HHHHH-HHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073           83 AALTY-YWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST  161 (402)
Q Consensus        83 ~~~~~-~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (402)
                      .++.. +..++.||+++.  .++++.++..+                             .++...+++   .++...+.
T Consensus       169 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-----------------------------~~~~~~~~~---~~~~~~~~  214 (385)
T TIGR00710       169 GILLSALIFFILPETLPY--EARIQISTYFE-----------------------------TFLLLLKSK---MFWGYALI  214 (385)
T ss_pred             HHHHHHHHHHhCCCCCCC--cccCCHHHHHH-----------------------------HHHHHHcCc---hhHHHHHH
Confidence            55543 344457776532  10100000000                             001111111   22222222


Q ss_pred             HHHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHH
Q 045073          162 WFLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM  240 (402)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~  240 (402)
                      ........+....+.|.+++ +.|.++.+.+.            ......++.+++.++.+++.||+|||+.+..+..+.
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~------------~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~  282 (385)
T TIGR00710       215 YGASFGGFFAFFSGAPFVYIDIMGVSPSVFGL------------LFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILF  282 (385)
T ss_pred             HHHHHHHHHHHHHcChHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence            22333344555666677765 57887776554            666677888899999999999999999888877666


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHH
Q 045073          241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAG  320 (402)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~  320 (402)
                      .++.+++.......                 ..............+.+.....+.......|..| +.|+++.++.+...
T Consensus       283 ~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~  344 (385)
T TIGR00710       283 AVSAVLLEITAILG-----------------LGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLR  344 (385)
T ss_pred             HHHHHHHHHHHHhc-----------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHH
Confidence            66655544432110                 1112222222222222233334456667778877 57899999998888


Q ss_pred             HHhHHHHhHhHHhhhh
Q 045073          321 KAGAIVGAFGVQYYTQ  336 (402)
Q Consensus       321 ~~g~~i~~~~~~~~~~  336 (402)
                      ..++.+.+.+.+...+
T Consensus       345 ~~~g~i~~~~~~~~~~  360 (385)
T TIGR00710       345 LVLGAIVGYLVSLIHG  360 (385)
T ss_pred             HHHHHHHHHHHHhccc
Confidence            7655555555554433

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.

>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily

Probab=99.76  E-value=3.6e-17  Score=155.86  Aligned_cols=276  Identities=10%  Similarity=-0.000  Sum_probs=166.3

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      +...+++.|++|+++|+++.++...+..+|..+++.+++.+.                       +..+||+.|++.+++
T Consensus       109 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-----------------------~~~~w~~~f~~~~~~  165 (485)
T TIGR00711       109 PLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWII-----------------------ENYHWRWIFLINVPI  165 (485)
T ss_pred             HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhc-----------------------cCcCceehhhhhhHH
Confidence            456788999999999999999999999999999999998886                       668999999997776


Q ss_pred             HHHHHH-HHhhccCCchhHHhhhCChhHHHHHHHH-------hccccccccccCCCCCC-----------------CCCc
Q 045073           83 AALTYY-WRMKMPETARYTALVEGNQKKAAVDMAK-------VLDTDLTVATSAYPVPV-----------------SPEA  137 (402)
Q Consensus        83 ~~~~~~-~~~~~pesp~~l~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~-----------------~~~~  137 (402)
                      +++..+ ..+++||+++.    ++++.+.......       ....+..++.+...+..                 .+.+
T Consensus       166 ~~~~~~~~~~~~~~~~~~----~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (485)
T TIGR00711       166 GIIVVVVAFFILPRDKPA----ASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELT  241 (485)
T ss_pred             HHHHHHHHHHHcCCcccc----ccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHc
Confidence            665444 34456765431    1111111100000       00000000000000000                 0000


Q ss_pred             cccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhh
Q 045073          138 STYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPG  216 (402)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  216 (402)
                      ...+....+..++  +.+.......+.....++....+.|.++++ .|+++.+.+.            ......++.+++
T Consensus       242 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~------------~~~~~~~~~~~~  307 (485)
T TIGR00711       242 DDNPLVDLRLFKY--RNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGL------------HILPVGLAPMLS  307 (485)
T ss_pred             CCCCccCHHHHcC--CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHH
Confidence            0000111111121  123333444444555666777788888876 6888876655            667778888999


Q ss_pred             hhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccc
Q 045073          217 YWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTT  296 (402)
Q Consensus       217 ~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (402)
                      .++.|++.||+|||+.+..+..+.+++..++....   ...              .+....... ....+++.....+..
T Consensus       308 ~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~---~~~--------------~~~~~~~~~-~~l~g~g~~~~~~~~  369 (485)
T TIGR00711       308 SPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTF---TPD--------------TPFLAIALP-QFIRGFGMGCFFMPL  369 (485)
T ss_pred             HHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccC---CCC--------------CCHHHHHHH-HHHHHHHHHHHHHHH
Confidence            99999999999999998888776666655444211   111              111222222 222222222222233


Q ss_pred             ccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhc
Q 045073          297 FIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQK  337 (402)
Q Consensus       297 ~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~  337 (402)
                      .....+..|++.|+++.|+.+....+|+.+|+.+.+.+.+.
T Consensus       370 ~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~  410 (485)
T TIGR00711       370 TTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN  410 (485)
T ss_pred             HHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44556778999999999999999999999999998888764

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.

>TIGR00902 2A0127 phenyl proprionate permease family protein

Probab=99.76  E-value=1.1e-16  Score=147.44  Aligned_cols=262  Identities=11%  Similarity=0.034  Sum_probs=168.5

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      |.+.++..|+  +++|++..+....+.++|.++++.+++.+.                       +..|||..|++..+.
T Consensus       113 p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~-----------------------~~~g~~~~f~~~~~~  167 (382)
T TIGR00902       113 PIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLI-----------------------GMFDEQNILAILTAG  167 (382)
T ss_pred             hHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHH-----------------------HHcChhHHHHHHHHH
Confidence            3444555554  478899999999999999999999999887                       667999999876544


Q ss_pred             HHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073           83 AALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW  162 (402)
Q Consensus        83 ~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (402)
                      .++.+.. +.++|++.-    ++++++.                       +.  ...+.++ +..|+  +.++......
T Consensus       168 ~~~~~~~-~~~~~~~~~----~~~~~~~-----------------------~~--~~~~~~~-~~l~~--~~~~~~l~~~  214 (382)
T TIGR00902       168 LAFMLIG-FLIKPTIPP----KDAIPED-----------------------ES--QGDSAFI-ALLKN--PMNLRFLAAV  214 (382)
T ss_pred             HHHHHHH-HHcCCCCCC----Ccccccc-----------------------cc--ccchhHH-HHHcC--hHHHHHHHHH
Confidence            3333332 334443210    0000000                       00  0000011 12222  1333333333


Q ss_pred             HHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHH
Q 045073          163 FLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSI  242 (402)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~  242 (402)
                      +...........+.|.+.++.|.+....+.            ......++.+++..+.+++.||+|+|+.+..+.+...+
T Consensus       215 ~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~------------l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~  282 (382)
T TIGR00902       215 CLIQGAHAAYYGFSAIYWQAAGISASATGL------------LWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVG  282 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCHhHHHH------------HHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHH
Confidence            444445555666778888889998876554            56678888888888999999999999999988888887


Q ss_pred             HHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHH-HHH
Q 045073          243 CMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAA-AGK  321 (402)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~-~~~  321 (402)
                      ..+.+...                     .+. +.+.......+.......+....++.+. |++.|+++.++++. ...
T Consensus       283 ~~~~~~~~---------------------~~~-~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g  339 (382)
T TIGR00902       283 RWAIIGAI---------------------EAF-PLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMG  339 (382)
T ss_pred             HHHHHHhH---------------------hhH-HHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHH
Confidence            77666543                     222 2223223333332233334456677777 99999999999864 566


Q ss_pred             HhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhe
Q 045073          322 AGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCS  360 (402)
Q Consensus       322 ~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~  360 (402)
                      +|..+++.+.|.+.+..  +. ..|++.+++.+++.++.
T Consensus       340 ~g~~~g~~~~G~l~~~~--g~-~~~~~~~~~~~~~~~~~  375 (382)
T TIGR00902       340 GLIAIFTAFAGFIYPTL--GA-GTFVFMAIIAAAAFFLI  375 (382)
T ss_pred             HHHHHHHHHHHHHHHhc--cH-HHHHHHHHHHHHHHHHH
Confidence            89999999999999987  54 66777777777665543

This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.

>PRK15034 nitrate/nitrite transport protein NarU; Provisional

Probab=99.75  E-value=2.7e-16  Score=144.68  Aligned_cols=282  Identities=13%  Similarity=0.087  Sum_probs=172.7

Q ss_pred             CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHh-----hhhccccCcccccccccccCCCCCchhHHHH
Q 045073            2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSG-----IFLHVYNAPAFNRNHVLSAQPQGDYLWRIVL   76 (402)
Q Consensus         2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f   76 (402)
                      ++.....+++++|+++||+++++.....++|..+++.+...+..     .++..          .+.....+..+||...
T Consensus       145 f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~----------~~~~~~g~~~~~~~~~  214 (462)
T PRK15034        145 FASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVN----------GVPQADGSVMSLANAA  214 (462)
T ss_pred             HHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccc----------cccccccchHHHHHHH
Confidence            45677889999999999999999977777777776666554331     11110          0000011356799998


Q ss_pred             HHhHHHHHHHHHHH-hhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHH
Q 045073           77 MFGAVPAALTYYWR-MKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHL  155 (402)
Q Consensus        77 ~~~~i~~~~~~~~~-~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (402)
                      ++-+++.++..++. ++++|.|.    ++.+.++.                                 ....+++   ..
T Consensus       215 ~~~~~~~iv~~i~~~~~~~~~~~----~~~~~~~~---------------------------------~~vlk~~---~~  254 (462)
T PRK15034        215 WIWVPLLAIATIAAWSGMNDIAS----SRASIADQ---------------------------------LPVLQRL---HL  254 (462)
T ss_pred             HHHHHHHHHHHHHHHHhCCCccc----cccCHHHH---------------------------------HHHhCCC---ch
Confidence            88666666554443 34444331    01111110                                 1111112   45


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHH
Q 045073          156 LGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLG  235 (402)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~  235 (402)
                      +.+++.+++....+.+...+.|.+.++ .++....            .....+..+...+..+++|+++||+|+|+++.+
T Consensus       255 Wllslly~~tFG~fvg~s~~lp~~~~~-~~~~~~~------------l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~  321 (462)
T PRK15034        255 WLLSLLYLATFGSFIGFSAGFAMLAKT-QFPDVNI------------LRLAFFGPFIGAIARSVGGAISDKFGGVRVTLI  321 (462)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHH-HcChHHH------------HHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHH
Confidence            666666666666777777788888765 2222111            002334456677788899999999999999998


Q ss_pred             HHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccccccccccc---------
Q 045073          236 GFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPA---------  306 (402)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~---------  306 (402)
                      +.+.+.++...+..... ....              .+.+.+...+.......+.+. ...+-++...+|+         
T Consensus       322 ~~i~~~i~~~~~~l~lp-~~~~--------------~~~~~~~~~~~~l~~~~G~gn-gsvfk~ip~~f~~~~~~~~~~~  385 (462)
T PRK15034        322 NFIFMAIFSALLFLTLP-GTGS--------------GNFIAFYAVFMGLFLTAGLGS-GSTFQMIAVIFRQITIYRVKMK  385 (462)
T ss_pred             HHHHHHHHHHHHHHHhc-cccc--------------cHHHHHHHHHHHHHHHhcccc-hHHHHhhHHHHhhhhhhccccc
Confidence            88766665543332211 0000              122222332222222222333 3566677788874         


Q ss_pred             ------------chhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073          307 ------------RLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV  363 (402)
Q Consensus       307 ------------~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~  363 (402)
                                  +.-|.+.|+....+.+|+++.|.+++...+..+ ++...|+.+.+..+++.++.|+.
T Consensus       386 ~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g-~~~~~~~~~~~~~~~~~~~~w~~  453 (462)
T PRK15034        386 GGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTG-SPVGAMKVFLIFYIVCVLLTWLV  453 (462)
T ss_pred             ccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcC-CcHHHHHHHHHHHHHHHHHHHHH
Confidence                        146788999999999999999999998888775 67788999999988888887754

>PRK15402 multidrug efflux system translocase MdfA; Provisional

Probab=99.75  E-value=6.2e-16  Score=143.83  Aligned_cols=250  Identities=12%  Similarity=0.029  Sum_probs=150.8

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      +...+++.|++|+++|++..++......+|..+++.+++.+.                       +..+||+.|++.++.
T Consensus       120 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~-----------------------~~~~w~~~~~~~~~~  176 (406)
T PRK15402        120 AVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALI-----------------------HVLPWRGMFVLFAAL  176 (406)
T ss_pred             HHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------HccCccHHHHHHHHH
Confidence            345677899999999999999988888899999999988876                       556899999987766


Q ss_pred             HHHHHH-HHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073           83 AALTYY-WRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST  161 (402)
Q Consensus        83 ~~~~~~-~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (402)
                      .++..+ ..+.+||+++..    +++.+ .++..                         +.++ ...++  +.++.....
T Consensus       177 ~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~-------------------------~~~~-~~~~~--~~~~~~~~~  223 (406)
T PRK15402        177 AALSFFGLWRAMPETAGRV----GEKLS-LKELG-------------------------RDYK-LVLKN--RRFVAGALA  223 (406)
T ss_pred             HHHHHHHHHHhCCCCCccc----ccccc-HHHHH-------------------------HHHH-HHHcC--cHHHHHHHH
Confidence            665444 344578775421    11000 00000                         0001 11111  122222222


Q ss_pred             HHHHHHHHHHHHhhhhhhh-hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHH
Q 045073          162 WFLLDIAFYTINLAQKDIY-PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM  240 (402)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~  240 (402)
                      .+......+....+.|.++ +..|+++.+.+.            ......++.+++.++.+++.||+++|+.+..+..+.
T Consensus       224 ~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~------------~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~  291 (406)
T PRK15402        224 LGLVSLPLLAWIALSPVILISGEQLSSYEYGL------------LQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPM  291 (406)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence            2233333344445567665 447787765443            444455677888889999999999999988887766


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHH
Q 045073          241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAG  320 (402)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~  320 (402)
                      .++..++........                ... ....+.....+.+.....+........ .+++.|++..++.+...
T Consensus       292 ~~g~~~~~~~~~~~~----------------~~~-~~~~~~~~~~g~g~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~  353 (406)
T PRK15402        292 VAGLLLAALATVISS----------------HAY-LWLTAGLSLYAFGIGLANAGLYRLTLF-SSDVSKGTVSAAMGMLS  353 (406)
T ss_pred             HHHHHHHHHHHHccc----------------ccH-HHHHHHHHHHHHHHHHHhhhHHHHHhh-hccccccHHHHHHHHHH
Confidence            666655554321100                111 222222222222222222223223322 34488999999999999


Q ss_pred             HHhHHHHhHhHHhhhhcc
Q 045073          321 KAGAIVGAFGVQYYTQKG  338 (402)
Q Consensus       321 ~~g~~i~~~~~~~~~~~~  338 (402)
                      .++..+|+.+.+.+.+..
T Consensus       354 ~~~~~~g~~~~~~l~~~~  371 (406)
T PRK15402        354 MLIFTVGIELSKHAYLGG  371 (406)
T ss_pred             HHHHHHHHHHHHhcccCC
Confidence            999999999999987765

>PRK11102 bicyclomycin/multidrug efflux system; Provisional

Probab=99.74  E-value=5.8e-16  Score=142.59  Aligned_cols=243  Identities=16%  Similarity=0.104  Sum_probs=141.5

Q ss_pred             cchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHH
Q 045073            4 LSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPA   83 (402)
Q Consensus         4 ~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~   83 (402)
                      ...+++.|++|+++|++++++.+.+..+|..+++.+++.+.                       +..+||+.|++.++..
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~-----------------------~~~~~~~~~~~~~~~~  155 (377)
T PRK11102         99 VINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLL-----------------------VWFSWHAIFWVLALAA  155 (377)
T ss_pred             HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------HHcChHHHHHHHHHHH
Confidence            45678999999999999999999999999999999998886                       5568999999876666


Q ss_pred             HHH-HHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073           84 ALT-YYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW  162 (402)
Q Consensus        84 ~~~-~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (402)
                      ++. ++..+++||+++.  . ++++.+..                          ...+.+++...++   ..+...+..
T Consensus       156 ~~~~~~~~~~~~~~~~~--~-~~~~~~~~--------------------------~~~~~~~~~~~~~---~~~~~~~~~  203 (377)
T PRK11102        156 ILAAALVFFFIPETLPK--E-RRQPFHLR--------------------------TTIRNFASLFRHK---RVLGYMLAS  203 (377)
T ss_pred             HHHHHHHHHhCCccCcc--c-ccCCCChH--------------------------HHHHHHHHHHcCh---HHHHHHHHH
Confidence            554 3444567776421  0 00000000                          0000001111111   222222222


Q ss_pred             HHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHH
Q 045073          163 FLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMS  241 (402)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~  241 (402)
                      +......+....+.|.++. ..|+++.+.+.            ......++.+++.++.+++.||+|||+.+..+..+..
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~------------~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~  271 (377)
T PRK11102        204 GFSFAGMFSFLTAGPFVYIELNGVSPQNFGY------------YFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQF  271 (377)
T ss_pred             HHHHHHHHHHHHcCHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence            2333334444445565554 47888776554            6667778888899999999999999999888776544


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHH
Q 045073          242 ICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGK  321 (402)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~  321 (402)
                      +..+.+...... .                ...+............ .....+....+..|..| +.|+++.++.+....
T Consensus       272 ~~~~~~~~~~~~-~----------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~  332 (377)
T PRK11102        272 IMGIWLVVSALL-D----------------LGFWALVVGVAAFVGC-VSMISSNAMAVILDEFP-HMAGTASSLAGTLRF  332 (377)
T ss_pred             HHHHHHHHHHHH-h----------------hhHHHHHHHHHHHHHH-HHHhhHHHHHHHhcccc-ccchHHHHHHHHHHH
Confidence            433332221110 0                1111122122122121 11222234445677767 788999998876644


Q ss_pred             -HhHHHHhHhHH
Q 045073          322 -AGAIVGAFGVQ  332 (402)
Q Consensus       322 -~g~~i~~~~~~  332 (402)
                       ++..+++.+.+
T Consensus       333 ~~g~~~g~~~~~  344 (377)
T PRK11102        333 GIGAIVGALLSL  344 (377)
T ss_pred             HHHHHHHHHHHh
Confidence             45556665433

>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family

Probab=99.74  E-value=4.5e-16  Score=143.89  Aligned_cols=266  Identities=13%  Similarity=0.010  Sum_probs=156.9

Q ss_pred             hhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHHHH
Q 045073            7 VIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAALT   86 (402)
Q Consensus         7 ~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~~~   86 (402)
                      .+..|..++++++.+.+....+..+|.++++...+.+.                       +..|||..|++.++..++.
T Consensus       120 ~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~-----------------------~~~gw~~~f~~~a~l~~~~  176 (390)
T TIGR02718       120 GMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLF-----------------------GKFGQRPAFLLVACVPLAS  176 (390)
T ss_pred             HHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------HHhCHHHHHHHHHHHHHHH
Confidence            34567777777788888888888888888888777776                       5678999999977766665


Q ss_pred             HHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHHHHHH
Q 045073           87 YYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLD  166 (402)
Q Consensus        87 ~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (402)
                      .+..++++|++..   +++++++..                         +.    +++..+++..+..+...   +...
T Consensus       177 ~~~~~~~~~~~~~---~~~~~~~~~-------------------------~~----~~~~l~~~~~~~~~~~~---~l~~  221 (390)
T TIGR02718       177 LVCVLWLKDRAVA---SPEAPLARR-------------------------AS----LFRFFRRPLAWSLLALA---LLSA  221 (390)
T ss_pred             HHHHHHcCCCCcC---ccccchhhH-------------------------HH----HHHHHcCcCHHHHHHHH---HHHH
Confidence            5544455443210   000000000                         00    01111112111122222   2222


Q ss_pred             HHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHH-HhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHH
Q 045073          167 IAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVA-LFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMA  245 (402)
Q Consensus       167 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~  245 (402)
                      ........+.+.+.++.|+++++.+.            ..... .+..+++.++.|++.||+|+|+.+..+..+.++..+
T Consensus       222 ~~~~~~~~~~~~~l~~~G~s~~~ig~------------~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~  289 (390)
T TIGR02718       222 MTAVSGFGLSKLYLVDAGWPLEWIGR------------LGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLAL  289 (390)
T ss_pred             HHHHHHHHHhhHHHHhcCCCHHHHHH------------HHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence            23333444567777888999887554            33333 346667788999999999999998877665533322


Q ss_pred             HHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccccccccccc-chhhhhhhHHHHHHHHhH
Q 045073          246 ILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPA-RLRSTCHGISAAAGKAGA  324 (402)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-~~r~~~~~~~~~~~~~g~  324 (402)
                      ...........               ... ...........+......+...+...+..++ +.+++..++.+....+|.
T Consensus       290 ~~~~~~~~~~~---------------~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~  353 (390)
T TIGR02718       290 LWFAQAAFWLA---------------PGI-AVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGE  353 (390)
T ss_pred             HHHHHHHcccC---------------CcH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHH
Confidence            22211110100               111 1111111111111111223344455555665 889999999999999999


Q ss_pred             HHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhe
Q 045073          325 IVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCS  360 (402)
Q Consensus       325 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~  360 (402)
                      .++|.+.+.+.+..  ++...|.+.+++.+++.++.
T Consensus       354 ~~g~~~~G~l~~~~--G~~~~f~~~~~~~l~a~~~~  387 (390)
T TIGR02718       354 LIASSIAGYLTDRF--GYAGGFLSGTVLAVLAILLA  387 (390)
T ss_pred             HHHHHHHHHHHHHH--ccHHHHHHHHHHHHHHHHHh
Confidence            99999999999987  78888888877777765543

RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.

>PRK11195 lysophospholipid transporter LplT; Provisional

Probab=99.74  E-value=5.4e-16  Score=143.20  Aligned_cols=269  Identities=12%  Similarity=-0.005  Sum_probs=157.7

Q ss_pred             CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073            2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV   81 (402)
Q Consensus         2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i   81 (402)
                      +|...+++.|++|+++|++++++.+....+|.++||.+++.+.                       + +.|+..+.+.+.
T Consensus       106 ~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~-----------------------~-~~~~~~~~i~~~  161 (393)
T PRK11195        106 SPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALA-----------------------D-PHAEAALAVCAL  161 (393)
T ss_pred             HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------H-HHHHHHHHHHHH
Confidence            4677889999999999999999999999999999999999986                       2 237777776655


Q ss_pred             HHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhH-HHHHHHH
Q 045073           82 PAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGL-HLLGTTS  160 (402)
Q Consensus        82 ~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  160 (402)
                      ..++.++..+.+||+|...   ++.+.+......+..                      +.++....++..+ .++...+
T Consensus       162 ~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~----------------------~~~~~l~~~~~~~~~~~~~~~  216 (393)
T PRK11195        162 IYLLAALFNLFIPRLGARR---PGQSWNPIALLRDFF----------------------HACRVLWRDKLGRFSLAGTTL  216 (393)
T ss_pred             HHHHHHHHHhcCCCCcccc---cccCCCHHHHHHHHH----------------------HHHHHHHhCchhHHHHHHHHH
Confidence            5555555556788876431   111111100000000                      0000101111111 1111111


Q ss_pred             HHHHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHH
Q 045073          161 TWFLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL  239 (402)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~  239 (402)
                      .+..    ........|.+.+ .+|.++.+.+.            ......++.++++++.+++.||.++|+.+..+.. 
T Consensus       217 ~~~~----~~~~~~~~~~~~~~~lg~s~~~~G~------------~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-  279 (393)
T PRK11195        217 FWGA----GATLRFLVLAWAPVALGITLNQPAY------------LQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-  279 (393)
T ss_pred             HHHH----HHHHHHHHHHHHHHHcCCChhHHHH------------HHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-
Confidence            1221    2222233344443 36777776555            7778888899999999999999998887776643 


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccch-hhhhhhHHHH
Q 045073          240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARL-RSTCHGISAA  318 (402)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~-r~~~~~~~~~  318 (402)
                      .++....+...                     .+.+.... .....+.+.....+...+...+..|++. +|++.++.+.
T Consensus       280 ~~~~~~~~~~~---------------------~~~~~~~~-~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~  337 (393)
T PRK11195        280 MGLVVLLMALQ---------------------HSLLPAYP-LLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNF  337 (393)
T ss_pred             HHHHHHHHHHH---------------------hHHHHHHH-HHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhH
Confidence            33322222221                     12222222 2222222222222334555677766655 7999999999


Q ss_pred             HHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee
Q 045073          319 AGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF  361 (402)
Q Consensus       319 ~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~  361 (402)
                      ..+++..++..+.+.+. ..  +.+..+.+.+...++++.+.+
T Consensus       338 ~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~  377 (393)
T PRK11195        338 NENLAMLLMLGLYSLLV-KL--GVPVVAVIVGFGLLVALAMAL  377 (393)
T ss_pred             HHHHHHHHHHHHHHHHH-Hc--CCCHHHHHHHHHHHHHHHHHH
Confidence            99999999998888664 33  677666666555555555544

>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter

Probab=99.74  E-value=2.3e-16  Score=148.29  Aligned_cols=252  Identities=17%  Similarity=0.123  Sum_probs=148.0

Q ss_pred             hhhhhhcc-CcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHH
Q 045073            6 AVIMSEYA-NKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAA   84 (402)
Q Consensus         6 ~~~i~e~~-~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~   84 (402)
                      .++..|.. ++++|++..++.+.+..+|.++++.+...+......                ..+..+||+.+++.+++++
T Consensus       121 ~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~----------------~~~~~g~~~~~~i~~~l~~  184 (437)
T TIGR00792       121 WSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGG----------------GDDKFGWFMFALVLALIGV  184 (437)
T ss_pred             hhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----------------CcccccHHHHHHHHHHHHH
Confidence            35667877 578999999999999999998888877666533221                1145689999988777666


Q ss_pred             HHHHH-HhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHHH
Q 045073           85 LTYYW-RMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWF  163 (402)
Q Consensus        85 ~~~~~-~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (402)
                      +..+. .++++|.++.    ++.++                         +++.+..+.++....++   .++......+
T Consensus       185 ~~~~~~~~~~~e~~~~----~~~~~-------------------------~~~~~~~~~~~~l~~~~---~~~~~~~~~~  232 (437)
T TIGR00792       185 VSLIICFFGTKERYSE----IPKNI-------------------------EKKLSLKQIFKALFKND---QLLILCLAYL  232 (437)
T ss_pred             HHHHHHHcCCEecCCC----CCccc-------------------------ccCCCHHHHHHHHhCCH---HHHHHHHHHH
Confidence            65443 4557775421    00000                         00001111111111112   2233333333


Q ss_pred             HHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHH
Q 045073          164 LLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSIC  243 (402)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~  243 (402)
                      ......+....+.+.+.+...-++...+            .......++.+++.++.++++||+|||+.+..+..+.+++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~  300 (437)
T TIGR00792       233 FYNLAFNIKNGVQVYYFTYVLGDPELFS------------YMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLG  300 (437)
T ss_pred             HHHHHHHHHcchhheeEeeecCChHHHH------------HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence            3333444433344444443211222211            1445557888888999999999999999998887776666


Q ss_pred             HHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccc-------cchhhhhhhHH
Q 045073          244 MAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFP-------ARLRSTCHGIS  316 (402)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~r~~~~~~~  316 (402)
                      .+.+.+..                    .+. ....+..+..++......+..+++.+|..+       ++.+|+..|+.
T Consensus       301 ~~~~~~~~--------------------~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~  359 (437)
T TIGR00792       301 YLIFFFAG--------------------SNL-PLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVR  359 (437)
T ss_pred             HHHHHHcc--------------------hhH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHH
Confidence            55443321                    111 222222222222223334556677777754       56679999999


Q ss_pred             HHHHHHhHHHHhHhHHhhhhcc
Q 045073          317 AAAGKAGAIVGAFGVQYYTQKG  338 (402)
Q Consensus       317 ~~~~~~g~~i~~~~~~~~~~~~  338 (402)
                      +....+|..+++.+.+.+.+..
T Consensus       360 ~~~~~~g~~lg~~i~g~ll~~~  381 (437)
T TIGR00792       360 TFVRKLGQALAGFLVGLILGII  381 (437)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHc
Confidence            9999999999999999988765

GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.

>PRK11043 putative transporter; Provisional

Probab=99.74  E-value=1.3e-15  Score=141.50  Aligned_cols=242  Identities=10%  Similarity=0.092  Sum_probs=149.9

Q ss_pred             hhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHHH
Q 045073            6 AVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAAL   85 (402)
Q Consensus         6 ~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~~   85 (402)
                      .+++.|++|+++|++..+.......+|..+++.+++.+.                       +..+||+.|++.++..++
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~-----------------------~~~g~~~~~~~~~~~~~~  172 (401)
T PRK11043        116 QALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLL-----------------------NHFGWQAIFATLFAITLL  172 (401)
T ss_pred             HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------hcCChHHHHHHHHHHHHH
Confidence            467889999999999999988889999999999998886                       567899999987777766


Q ss_pred             HHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHHHHH
Q 045073           86 TYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLL  165 (402)
Q Consensus        86 ~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (402)
                      ..+..++++|+++.    ++ +++..+..                             +...+++   ..+...+.....
T Consensus       173 ~~~~~~~~~~~~~~----~~-~~~~~~~~-----------------------------~~~~~~~---~~~~~~~~~~~~  215 (401)
T PRK11043        173 LILPTLRLKPSKKA----RK-QSQDALTF-----------------------------KQLLKSK---TYLGNVLIFAAC  215 (401)
T ss_pred             HHHHHHHcCCCCCc----cc-cchHHHHH-----------------------------HHHHcCh---hHHHHHHHHHHH
Confidence            65555556655421    11 00000000                             1111111   111111222222


Q ss_pred             HHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHH
Q 045073          166 DIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMA  245 (402)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~  245 (402)
                      ...++....+.|.+.++.|++..+.+.            ......++.++|.++.+++.||+++|+.+.......+++.+
T Consensus       216 ~~~~~~~~~~~p~~~~~~g~s~~~~g~------------~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~  283 (401)
T PRK11043        216 SAAFFAWLTGSPFILEQMGYSPADIGL------------SYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVI  283 (401)
T ss_pred             HHHHHHHHHHhHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence            334445556778888888888776554            44555677788888899999999999876655555444443


Q ss_pred             HHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHH
Q 045073          246 ILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAI  325 (402)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~  325 (402)
                      .+...... . .              ...+...... ...+.......+.......+..| +.|+++.|+.+..+..++.
T Consensus       284 ~~~~~~~~-~-~--------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~  345 (401)
T PRK11043        284 AIWLASLL-S-H--------------PSLVPLLIPF-CVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCF  345 (401)
T ss_pred             HHHHHHHh-c-c--------------CcHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHH
Confidence            33222110 0 0              1222222222 22222233344555555566666 5799999999999888888


Q ss_pred             HHhHhHHhhhhc
Q 045073          326 VGAFGVQYYTQK  337 (402)
Q Consensus       326 i~~~~~~~~~~~  337 (402)
                      .++.+.+.+.+.
T Consensus       346 ~~~~~~g~l~~~  357 (401)
T PRK11043        346 LASLLVSALIST  357 (401)
T ss_pred             HHHHHHHHccCC
Confidence            898888888764

>PRK10473 multidrug efflux system protein MdtL; Provisional

Probab=99.74  E-value=8.4e-16  Score=142.27  Aligned_cols=177  Identities=12%  Similarity=0.114  Sum_probs=110.3

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      +...+++.|++|+++|+++.++.+....+|.++++.+++.+.                       +..+||+.|++.++.
T Consensus       110 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~-----------------------~~~g~~~~~~~~~~~  166 (392)
T PRK10473        110 VVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIM-----------------------LKFPWQSLFYTMAAM  166 (392)
T ss_pred             HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------hCcChHHHHHHHHHH
Confidence            345678899999999999999999999999999999988775                       557899999987666


Q ss_pred             HHHH-HHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073           83 AALT-YYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST  161 (402)
Q Consensus        83 ~~~~-~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (402)
                      +++. ++..+++||++..  . ++++....                         +..    +...+++   .++.....
T Consensus       167 ~~i~~~~~~~~~~~~~~~--~-~~~~~~~~-------------------------~~~----~~~~~~~---~~~~~~~~  211 (392)
T PRK10473        167 GILVLLLSLFILKETRPA--R-APAASSKP-------------------------REN----SESLLNR---FFLSRLVI  211 (392)
T ss_pred             HHHHHHHHHHHcCCCCCc--c-cCCccchH-------------------------HHH----HHHHhCH---HHHHHHHH
Confidence            5554 3344567776422  0 00000000                         000    1111111   11111111


Q ss_pred             HHHHHHHHHHHHhhhhhhh-hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHH
Q 045073          162 WFLLDIAFYTINLAQKDIY-PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM  240 (402)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~  240 (402)
                      .............+.|.++ ++.|+++.+.+.            ......++.+++.++.+++.||+|||+.+..+..+.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------------~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~  279 (392)
T PRK10473        212 TTLSVTVILTFVNTSPVLLMEQMGFSRGEYAI------------IMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLF  279 (392)
T ss_pred             HHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence            1111111222333445554 456887765443            556677788888899999999999999988887776


Q ss_pred             HHHHHHHHH
Q 045073          241 SICMAILGA  249 (402)
Q Consensus       241 ~~~~~~~~~  249 (402)
                      .++.+.+..
T Consensus       280 ~~~~~~~~~  288 (392)
T PRK10473        280 LAAGITLAL  288 (392)
T ss_pred             HHHHHHHHH
Confidence            666655554

>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms

Probab=99.73  E-value=3.4e-17  Score=149.26  Aligned_cols=246  Identities=19%  Similarity=0.218  Sum_probs=153.2

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      +...+++.|++|+++|++++++...+..+|.++++.+++.+.                       +..+||+.|++.++.
T Consensus       104 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~-----------------------~~~~~~~~~~~~~~~  160 (352)
T PF07690_consen  104 PASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLI-----------------------SYFGWRWAFLISAIL  160 (352)
T ss_dssp             HHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCC-----------------------CHCHHCCHHHHHHHH
T ss_pred             ccccccccccchhhhhhhccccccchhhhhhhcccchhhhhh-----------------------hccccccccccccch
Confidence            456788999999999999999999999999999999999875                       667899999998887


Q ss_pred             HHHHHHH-HhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073           83 AALTYYW-RMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST  161 (402)
Q Consensus        83 ~~~~~~~-~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (402)
                      .++..++ ..+++++|.....+++++++  +                     +.++...+.++....++   .++.....
T Consensus       161 ~~~~~il~~~~~~~~~~~~~~~~~~~~~--~---------------------~~~~~~~~~~~~~~~~~---~~~~~~~~  214 (352)
T PF07690_consen  161 SLIAAILFILFLPEPPPPRERESPKESE--S---------------------KKPKPLKPGFKSLFKNP---VLWILLIA  214 (352)
T ss_dssp             HHHHHHHHHCCC---STTTT--SSTTTT-------------------------HHHCCCH-CTHHHHHH---CCHHHHHH
T ss_pred             hhhhhhhHhhhhhhcccccccccccccc--c---------------------ccccccccccccccccc---hhhhhhhh
Confidence            7776553 34555554321111111100  0                     00000001112111111   11122223


Q ss_pred             HHHHHHHHHHHHhhhhhh-hhhcCcc-hhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHH
Q 045073          162 WFLLDIAFYTINLAQKDI-YPATGIV-RKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL  239 (402)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~-~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~  239 (402)
                      .+......+....+.|.+ .+..|.+ ..+.+.            ......+..+++.++.+++.||+++|+........
T Consensus       215 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  282 (352)
T PF07690_consen  215 FFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGL------------LFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILL  282 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred             hhHHHHHHHHhhcccchhhhhccCCCHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHH
Confidence            333334555577778887 4567777 454433            56677777888888999999999987777666555


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH
Q 045073          240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA  319 (402)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~  319 (402)
                      ..+..+.+......                  .+.........+ .+++.....+....+..|..|++.|+++.|+.+..
T Consensus       283 ~~~~~~~~~~~~~~------------------~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~  343 (352)
T PF07690_consen  283 LILGALGLLLLPFS------------------SSPVWLIIALFL-IGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSI  343 (352)
T ss_dssp             HHHHHHHHCCSHHH------------------CHHHHHHHHHHH-HHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh------------------hhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence            54444433332110                  111222222222 23333344567888899999999999999999999


Q ss_pred             HHHhHHHHh
Q 045073          320 GKAGAIVGA  328 (402)
Q Consensus       320 ~~~g~~i~~  328 (402)
                      ..+++.++|
T Consensus       344 ~~~~~~igP  352 (352)
T PF07690_consen  344 GSLGGIIGP  352 (352)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHCC
Confidence            999999887

These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.

>PRK09528 lacY galactoside permease; Reviewed

Probab=99.72  E-value=1.3e-16  Score=148.94  Aligned_cols=135  Identities=18%  Similarity=0.058  Sum_probs=94.6

Q ss_pred             HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073          205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT  284 (402)
Q Consensus       205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (402)
                      ......++..++.++.|++.||+|||+.+..+.++.++...++.+.                     .+.+.. ......
T Consensus       267 ~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~---------------------~~~~~~-~~~~~l  324 (420)
T PRK09528        267 LNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFA---------------------TGPLEV-SILKLL  324 (420)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhc---------------------ccHHHH-HHHHHH
Confidence            5555666777888899999999999999888777766665555432                     222222 222222


Q ss_pred             HHHHhhCCccccccccccccccchhhhhhhH-HHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073          285 LFFANFGPNSTTFIVPAELFPARLRSTCHGI-SAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV  363 (402)
Q Consensus       285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~-~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~  363 (402)
                      .+.......+....+..|.+|++.|++..+. .+....+|.++++.+.+.+.+..  |++..|.+.+++.++..++.++.
T Consensus       325 ~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~--G~~~~f~~~~~~~~i~~~~~~~~  402 (420)
T PRK09528        325 HAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSI--GFQGTYLILGGIVLLFTLISVFT  402 (420)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhh--CchHHHHHHHHHHHHHHHHHHHH
Confidence            2222222223445677888999999988766 56778899999999999999987  89999998888877666555543

>TIGR01272 gluP glucose/galactose transporter

Probab=99.72  E-value=2.7e-15  Score=133.42  Aligned_cols=270  Identities=11%  Similarity=-0.017  Sum_probs=163.9

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHh-HH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFG-AV   81 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~-~i   81 (402)
                      +.++.|+++..|++++.+.+++.+.++++|.+++|.++..+......+..+.       ..........||+++++. ++
T Consensus        29 ~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~-------~~~~~~~~~~~~~~yl~ia~~  101 (310)
T TIGR01272        29 VAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQ-------VATANAEAAKVHTPYLLLAGA  101 (310)
T ss_pred             hhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhh-------hhhhhHHHHHHHHHHHHHHHH
Confidence            4568899999999999999999999999999999999998863211000000       000000125799999864 44


Q ss_pred             HHHHHHHH-HhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHH
Q 045073           82 PAALTYYW-RMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTS  160 (402)
Q Consensus        82 ~~~~~~~~-~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (402)
                      ..++.++. +..+||...      ++.++.                .+     ++...     +++..++  +..+...+
T Consensus       102 ~~~~~i~~~~~~~p~~~~------~~~~~~----------------~~-----~~~~~-----~~~~~~~--~~~~l~~~  147 (310)
T TIGR01272       102 LAVLAIIFAFLPLPELQE------ADVARV----------------SS-----GDTTQ-----KTSAFQF--THLVLGAL  147 (310)
T ss_pred             HHHHHHHHHHccCCCCCc------cccccc----------------cc-----ccccc-----hhhHHhh--HHHHHHHH
Confidence            34433332 223455311      100000                00     00000     1111221  23333444


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhh---cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHH
Q 045073          161 TWFLLDIAFYTINLAQKDIYPA---TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGF  237 (402)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~  237 (402)
                      ..++....-.+...|.+.|+.+   .|+++.+.+.            .......+.++|+++++++.||+|+|+.+.++.
T Consensus       148 ~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~------------~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~  215 (310)
T TIGR01272       148 GIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAH------------FTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNA  215 (310)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence            4444444556667788888864   4788776555            778888899999999999999999999888776


Q ss_pred             HHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHH
Q 045073          238 LLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISA  317 (402)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~  317 (402)
                      .+..++.++....                     ....... ... ..+++.....|...+...+.+|++ .+++.++. 
T Consensus       216 ~l~~~~~~l~~~~---------------------~~~~~~~-~~~-l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-  270 (310)
T TIGR01272       216 FLAVLLSIGAALT---------------------HGYVAMW-FVL-ALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-  270 (310)
T ss_pred             HHHHHHHHHHHHc---------------------CCHHHHH-HHH-HHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-
Confidence            6665554333221                     1111122 111 223334455677777778888764 45666765 


Q ss_pred             HHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHH
Q 045073          318 AAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVV  352 (402)
Q Consensus       318 ~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (402)
                      ..+.+|+++.|.+.|.+.|..  +.+..+++..++
T Consensus       271 ~~~~~Gg~i~P~l~G~lad~~--g~~~a~~v~~~~  303 (310)
T TIGR01272       271 CLAIVGGAIVPLLQGSLADCL--GIQLAFALPVPC  303 (310)
T ss_pred             HHHHhcchHHHHHHHHHHHhc--cchHHHHHHHHH
Confidence            577799999999999999977  777776644433

Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.

>PRK03633 putative MFS family transporter protein; Provisional

Probab=99.72  E-value=1.8e-15  Score=139.35  Aligned_cols=153  Identities=14%  Similarity=0.084  Sum_probs=107.2

Q ss_pred             HHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHH
Q 045073          171 TINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGAR  250 (402)
Q Consensus       171 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~  250 (402)
                      ....+.|.+.++.|.+....+.            ......++.+++.+..|++.||+|+|+.+..+.....++.+.+.. 
T Consensus       218 ~~~~~lp~~~~~~g~s~~~~g~------------~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~-  284 (381)
T PRK03633        218 SLYGLMPLYLNHQGMSDASIGF------------WMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAMLS-  284 (381)
T ss_pred             HHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHhh-
Confidence            3345678888888888776444            556677788889999999999999999888776666555433221 


Q ss_pred             hhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHh
Q 045073          251 YDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFG  330 (402)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~  330 (402)
                                           ..  .......+ .+.......|...+.+.|..|++.++...+..+....+|..++|.+
T Consensus       285 ---------------------~~--~~~~~~~l-~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~  340 (381)
T PRK03633        285 ---------------------QA--AMAPALFI-LGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSF  340 (381)
T ss_pred             ---------------------hH--HHHHHHHH-HHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                                 01  11111111 1222233456677778898988888888888888888999999999


Q ss_pred             HHhhhhccCCcchhhHHHHHHHHHHHhhheee
Q 045073          331 VQYYTQKGDKQIKQSIITLAVVNFLGFLCSFM  362 (402)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~  362 (402)
                      .+.+.+..  ++...|.+.+++.++..+..+.
T Consensus       341 ~G~l~~~~--g~~~~f~~~~~~~l~~~~~~~~  370 (381)
T PRK03633        341 TAMLMQNY--SDNLLFIMIASVSFIYLLMLLR  370 (381)
T ss_pred             HHHHHHHh--CccHHHHHHHHHHHHHHHHHHh
Confidence            99999887  7888888888777766555443

>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions

Probab=99.71  E-value=1.1e-14  Score=135.71  Aligned_cols=297  Identities=16%  Similarity=0.152  Sum_probs=195.6

Q ss_pred             hhhhhhccCcccc--------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccc
Q 045073            6 AVIMSEYANKRTR--------------------------GAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRN   59 (402)
Q Consensus         6 ~~~i~e~~~~~~R--------------------------g~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~   59 (402)
                      .+|+.|..+++++                          ++..+.-.....+|.++.-++...+....+..         
T Consensus       148 na~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~---------  218 (477)
T PF11700_consen  148 NAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGST---------  218 (477)
T ss_pred             HHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCc---------
Confidence            4677888888888                          99999888888899988888877765322211         


Q ss_pred             cccccCCCCCchhHHHHHHhHHH-HHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCcc
Q 045073           60 HVLSAQPQGDYLWRIVLMFGAVP-AALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEAS  138 (402)
Q Consensus        60 ~~~~~~~~~~~~Wr~~f~~~~i~-~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (402)
                            ..+..+-|..+.+.++. .+..+...+++||.|+.. ..++...--....++                      
T Consensus       219 ------~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~-~~~~~~~~~~~g~~~----------------------  269 (477)
T PF11700_consen  219 ------ASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPR-PLPSGSSYLRFGFKR----------------------  269 (477)
T ss_pred             ------cccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCC-CCCcchhHHHHHHHH----------------------
Confidence                  11345578888886655 445666777789887520 001111000000110                      


Q ss_pred             ccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhh
Q 045073          139 TYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGY  217 (402)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  217 (402)
                      .++.+++  . ++.+.+....+.+++..-+...+......+.+ .+|++..+...            ..+...+.+++|+
T Consensus       270 l~~t~k~--~-~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~------------~~l~~~i~a~~Ga  334 (477)
T PF11700_consen  270 LWRTFKE--I-RKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIV------------FGLVVQIVAIIGA  334 (477)
T ss_pred             HHHHHHH--H-HhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHH------------HHHHHHHHHHHHH
Confidence            0111111  1 22235555566666666666677777777765 68999887544            6777788899999


Q ss_pred             hhHHHhhhccchh--HHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccc
Q 045073          218 WFTVFLIDRIGRF--IIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNST  295 (402)
Q Consensus       218 ~~~g~l~dr~grr--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (402)
                      ++.+++.||+|.|  ++++.+..+..+..+. +.........  .        .  .+. +-+.++.+..+....+.++.
T Consensus       335 ~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~-g~~G~~~~~~--g--------~--~~~-~~f~~~a~~~G~~~G~~qs~  400 (477)
T PF11700_consen  335 LLFGWLQDRFGPKTKRTLLISLILWIIIPLY-GLFGFWPSFF--G--------L--KSP-WEFWVLAVLIGLFMGGIQSA  400 (477)
T ss_pred             HHHHHHHHHhCCchhHHHHHHHHHHHHHHHH-HHHHhhhccc--C--------c--ccH-HHHHHHHHHHHHHhhhHHHH
Confidence            9999999999998  7777665554332222 1211000000  0        0  122 22333444445556667788


Q ss_pred             cccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeeccCCcc
Q 045073          296 TFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETNGLS  370 (402)
Q Consensus       296 ~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~~~~  370 (402)
                      .-++.+|+.|++..+.-.|++...+...+++||++++.+.+.++ +.+..+....++.++++++.+.++..|+++
T Consensus       401 sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg-~~r~g~~~l~~lf~~gl~ll~~v~~~~g~~  474 (477)
T PF11700_consen  401 SRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATG-SQRYGFLFLLVLFLIGLILLFFVDVEKGRE  474 (477)
T ss_pred             HHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CchhHHHHHHHHHHHHHHHHhhccchhhhh
Confidence            88899999999999999999999999999999999999999885 588888888888899988888776655543

Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.

>PRK11128 putative 3-phenylpropionic acid transporter; Provisional

Probab=99.71  E-value=1.8e-15  Score=139.36  Aligned_cols=261  Identities=10%  Similarity=0.050  Sum_probs=154.4

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      |.+.+++.++  .++|++..+....+.++|.++++.+++.+.                       +..|||..|++.++.
T Consensus       113 ~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~-----------------------~~~g~~~~f~~~~~~  167 (382)
T PRK11128        113 PLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLV-----------------------SWFGEQAILWILTAG  167 (382)
T ss_pred             cHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHH-----------------------HHcChhHHHHHHHHH
Confidence            3344555665  456888888888899999999999999987                       667999999886655


Q ss_pred             HHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073           83 AALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW  162 (402)
Q Consensus        83 ~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (402)
                      .++.++..++.||.++.     +++++.                       .+  ...+.++ ..+|+  +.++......
T Consensus       168 ~~~~~~~~~~~~~~~~~-----~~~~~~-----------------------~~--~~~~~~~-~i~~~--~~~~~~~~~~  214 (382)
T PRK11128        168 VASMLLGQLLRPTIMPQ-----GESRQQ-----------------------ES--AGWPAWK-ALLKE--PTVWRFLLCV  214 (382)
T ss_pred             HHHHHHHHHccCCCCCc-----cccccc-----------------------cc--cccchHH-HHHcC--hhHHHHHHHH
Confidence            44444444445553211     000000                       00  0000111 12222  1233333333


Q ss_pred             HHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHH
Q 045073          163 FLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSI  242 (402)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~  242 (402)
                      +...........+.|.+.++.|.+..+.+.            ......++.++..++.+++.||+|+|+.+..+....++
T Consensus       215 ~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~------------~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~  282 (382)
T PRK11128        215 SLLQGSHAAYYGFSAIYWQAAGYSASTIGY------------LWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVV  282 (382)
T ss_pred             HHHHHHhHhHHHHHHHHHHHCCCCHhHHHH------------HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Confidence            333333444455667777778888766544            45566677888888999999999999998888777666


Q ss_pred             HHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH-HH
Q 045073          243 CMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA-GK  321 (402)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~-~~  321 (402)
                      ..+.+...                     ++. +.+.+..+..+.......+....+..+. +++.+++..++.+.. ..
T Consensus       283 ~~~~~~~~---------------------~~~-~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  339 (382)
T PRK11128        283 RWGLMGST---------------------TAL-PWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMG  339 (382)
T ss_pred             HHHHHHhh---------------------hhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHH
Confidence            65544332                     222 2222222222222222233445556665 555568888887644 45


Q ss_pred             HhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhh
Q 045073          322 AGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLC  359 (402)
Q Consensus       322 ~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~  359 (402)
                      +|..++|.+.|.+.+..  +. ..++..+++.+++.++
T Consensus       340 ~g~~ig~~i~G~l~~~~--g~-~~~~~~~~~~~~~~~~  374 (382)
T PRK11128        340 GSIAIMTVLSGFLYQHL--GA-GVFWVMALVALPALFI  374 (382)
T ss_pred             HHHHHHHHHHHHHHHhc--cH-HHHHHHHHHHHHHHHH
Confidence            67789999999999987  54 4555556555555443

>TIGR00889 2A0110 nucleoside transporter

Probab=99.70  E-value=1.1e-15  Score=142.15  Aligned_cols=175  Identities=11%  Similarity=0.037  Sum_probs=113.3

Q ss_pred             HHHhhhhhhhhhcCcchhhh-hhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q 045073          171 TINLAQKDIYPATGIVRKAA-AMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGA  249 (402)
Q Consensus       171 ~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~  249 (402)
                      ....+.+.+.++.|.++... +.     .............+..+++.+..++++||+|||+++..+.++.+++..++..
T Consensus       226 ~~~~~~~~~~~~~g~~~~~~~~~-----~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~  300 (418)
T TIGR00889       226 ITNIFGNGFLHEFGRNPEFADSF-----VVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAY  300 (418)
T ss_pred             HHHHhHHHHHHHhcccccccchh-----hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence            33355577776666554211 00     0002223666677788888889999999999999999988877776555444


Q ss_pred             HhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHH-HHHHHhHHHHh
Q 045073          250 RYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISA-AAGKAGAIVGA  328 (402)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~-~~~~~g~~i~~  328 (402)
                      ...    .              ........+..+..+.......+....++.|.+|++.|+++.|+.+ ....+|.+++|
T Consensus       301 ~~~----~--------------~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp  362 (418)
T TIGR00889       301 GDP----E--------------YFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGY  362 (418)
T ss_pred             cCc----c--------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHH
Confidence            210    0              0011222222222222222333455667899999999999999997 56788999999


Q ss_pred             HhHHhhhhccC----CcchhhHHHHHHHHHHHhhheee-eeccCC
Q 045073          329 FGVQYYTQKGD----KQIKQSIITLAVVNFLGFLCSFM-VPETNG  368 (402)
Q Consensus       329 ~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~i~~~~-~~et~~  368 (402)
                      .+.|.+.+..+    .+|+..|.+.+++.+++.++.++ ++|+++
T Consensus       363 ~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~  407 (418)
T TIGR00889       363 ILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHN  407 (418)
T ss_pred             HHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence            99999998753    15788888888887777666554 476644

This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional

Probab=99.70  E-value=1.6e-15  Score=158.87  Aligned_cols=283  Identities=14%  Similarity=0.037  Sum_probs=169.9

Q ss_pred             CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073            2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV   81 (402)
Q Consensus         2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i   81 (402)
                      .|+..+++.|++|+++|++++++.+++.++|.++|+.+++++.                       ...+|++.|+..++
T Consensus       126 ~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~-----------------------~~~~~~~~~~~~~~  182 (1140)
T PRK06814        126 GPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLAT-----------------------ISGNFVILVALLMG  182 (1140)
T ss_pred             chHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHH-----------------------hccccHHHHHHHHH
Confidence            3677889999999999999999999999999999999999997                       56789999966666


Q ss_pred             HHHHHHHHHhhccCCchhHHhhhCChh-HHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHH
Q 045073           82 PAALTYYWRMKMPETARYTALVEGNQK-KAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTS  160 (402)
Q Consensus        82 ~~~~~~~~~~~~pesp~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (402)
                      .+++.+++.+++|+++.-  ....+.+ ...+..                         .+.++. ..++  +.++...+
T Consensus       183 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-------------------------~~~~~~-~~~~--~~~~~~~~  232 (1140)
T PRK06814        183 IAVLGWLASLFIPKTGNA--APDLKIDRNIIRST-------------------------ITLLKY-AKAD--KRIWLAIL  232 (1140)
T ss_pred             HHHHHHHHHhhCCCCCCC--CCCCeeccchHHHH-------------------------HHHHHH-HhcC--chHHHHHH
Confidence            666666666677776421  0000000 000000                         000111 1111  12333333


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHH
Q 045073          161 TWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL  239 (402)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~  239 (402)
                      ..+...........+.|.++++ +|.+....+.            +.....++.++|.++.|++.++.++++.+..+.++
T Consensus       233 ~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~------------~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~  300 (1140)
T PRK06814        233 GISWFWLVGAVVLSQLPLLAKETLGGDENVATL------------FLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALL  300 (1140)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHH------------HHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHH
Confidence            3333334445556677888765 6777776554            77788889999999999999887776655555554


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH
Q 045073          240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA  319 (402)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~  319 (402)
                      .+++.+.+.+.............  -..........+.+.+..++.+++.....+...+++.+..|++.||+++|+.+++
T Consensus       301 ~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~  378 (1140)
T PRK06814        301 MGLFGLDLAFASSSVPAEPAQLK--SILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVL  378 (1140)
T ss_pred             HHHHHHHHHhccccccccccccc--chhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHH
Confidence            44444333321000000000000  0000000011122222222223333334445778889999999999999999999


Q ss_pred             HHHhHHHHhHhHHhhhhccCCcchhhHHHHHHH
Q 045073          320 GKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVV  352 (402)
Q Consensus       320 ~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (402)
                      ..++..+++.+.+.+.+... ++...+++.+++
T Consensus       379 ~~~~~~ig~~~~g~l~~~~~-~~~~~~~~~~~~  410 (1140)
T PRK06814        379 NAAFMVAGTIILALLQALGF-SIPWIILFIALA  410 (1140)
T ss_pred             HHHHHHHHHHHHHHHHHhcc-CHHHHHHHHHHH
Confidence            99999999998888874321 444554444443

>PRK10054 putative transporter; Provisional

Probab=99.70  E-value=1.4e-15  Score=140.53  Aligned_cols=263  Identities=11%  Similarity=0.077  Sum_probs=155.7

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      +....+..|..|+++|+++.++.....++|.++++.+++.+.                       . .+||..|++.++.
T Consensus       115 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~-----------------------~-~g~~~~f~~~~~~  170 (395)
T PRK10054        115 TVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLV-----------------------M-QSINLPFWLAAIC  170 (395)
T ss_pred             HHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------H-hccCcHHHHHHHH
Confidence            345677789999999999999999999999999999999875                       2 4799999987776


Q ss_pred             HHHHHH-HHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073           83 AALTYY-WRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST  161 (402)
Q Consensus        83 ~~~~~~-~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (402)
                      .++.++ ..+++||+++-    +++++++                       .  ...    ++..+++   .++.....
T Consensus       171 ~~i~~i~~~~~~~~~~~~----~~~~~~~-----------------------~--~~~----~~~~~~~---~~~~~~~~  214 (395)
T PRK10054        171 SAFPLVFIQIWVQRSEKA----IATETGS-----------------------V--WSP----SVLLQDK---ALLWFTCS  214 (395)
T ss_pred             HHHHHHHHHHHHhccccc----cccchhh-----------------------h--hhh----hhhccCc---eehHHHHH
Confidence            666543 33445654211    0000000                       0  000    1111111   12222222


Q ss_pred             HHHHHHHHHHHHhhhhhhh---hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHH
Q 045073          162 WFLLDIAFYTINLAQKDIY---PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFL  238 (402)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~  238 (402)
                      .+...........+.+.+.   .+.+.+....+            .......+.........+++.||.++|+.+..+..
T Consensus       215 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~  282 (395)
T PRK10054        215 GFLASFVSGAFASCISQYVMVVADSDFAEKVVA------------VVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTL  282 (395)
T ss_pred             HHHHHHHHHHhhhhHHHHHHHhcccchHHHHHH------------HHHHhhhhheeeehhHHHHHHccCCchhHHHHHHH
Confidence            2221112222222333333   22333333222            14445555566666778899999999998888876


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHH
Q 045073          239 LMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAA  318 (402)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~  318 (402)
                      +..++...+...                     .+......+.....+.+.....+.....+.+..|++.|++..+..+ 
T Consensus       283 ~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-  340 (395)
T PRK10054        283 CFVIGLVGFIFS---------------------GNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-  340 (395)
T ss_pred             HHHHHHHHHHHc---------------------chHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-
Confidence            666665544432                     1112222222233333333334456677889999999999988755 


Q ss_pred             HHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee
Q 045073          319 AGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF  361 (402)
Q Consensus       319 ~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~  361 (402)
                      ..++|..+||.+.+.+.++.  +....|++.+++..+..++..
T Consensus       341 ~~~~G~~~Gp~~~G~l~~~~--g~~~~~~~~~~~~~~~~~~~~  381 (395)
T PRK10054        341 LGWLGAAINPLVSGVILTTL--PPWSLFVILALAIVAAWLLML  381 (395)
T ss_pred             HHHHHHHHHHHHHHHHHHHc--ChhhHHHHHHHHHHHHHHHHH
Confidence            67789999999999999987  777777776665555444443

>PRK11646 multidrug resistance protein MdtH; Provisional

Probab=99.70  E-value=1.4e-15  Score=140.76  Aligned_cols=262  Identities=15%  Similarity=0.187  Sum_probs=151.1

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      |...+++.|++|+++|++++++......+|..+++.+++.+.                        .++||+.|++.++.
T Consensus       118 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~------------------------~~g~~~~f~~~~~~  173 (400)
T PRK11646        118 PPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL------------------------QYDFRLVCATGAVL  173 (400)
T ss_pred             HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------HhhHHHHHHHHHHH
Confidence            345678899999999999999999999999999999998884                        25899999987766


Q ss_pred             HHHHH-HHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073           83 AALTY-YWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST  161 (402)
Q Consensus        83 ~~~~~-~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (402)
                      .++.. +..+++||.+.     ++.+++..+                         .    ++. ..+++  .++.....
T Consensus       174 ~~~~~i~~~~~~~~~~~-----~~~~~~~~~-------------------------~----~~~-~~~~~--~~~~~~~~  216 (400)
T PRK11646        174 FVLAAAFNAWLLPAYKL-----STVRTPVRE-------------------------G----MTR-VLRDK--RFVTYVLT  216 (400)
T ss_pred             HHHHHHHHHHhCCcccc-----cccchhhHH-------------------------H----HHH-HHcCc--hHHHHHHH
Confidence            55543 33444565310     000000000                         0    011 11111  11111111


Q ss_pred             HHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhh-hccchhHHHHHHHHHH
Q 045073          162 WFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLI-DRIGRFIIQLGGFLLM  240 (402)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~-dr~grr~~~~~~~~~~  240 (402)
                      .+...........+.|.+.++.+.++.+.+.            ......+....+....+++. ||++.++.+..+..+.
T Consensus       217 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~------------l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~  284 (400)
T PRK11646        217 LTGYYMLAVQVMLMLPIMVNDIAGSPSAVKW------------MYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIM  284 (400)
T ss_pred             HHHHHHHHHHHHHhhhhhHHhhcCCchHHHH------------HHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Confidence            1222222223345678887776655554332            33333333333333344444 5566666666666655


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHH
Q 045073          241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAG  320 (402)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~  320 (402)
                      +++..++...                     .+. ....+.....+.+.....+...++..+..|++.|+++.|+.+...
T Consensus       285 ~~~~~~l~~~---------------------~~~-~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~  342 (400)
T PRK11646        285 SLSMFPIGMV---------------------SNL-QQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGL  342 (400)
T ss_pred             HHHHHHHHHh---------------------hhH-HHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHH
Confidence            5555444332                     111 122211122222222333455677889999999999999999999


Q ss_pred             HHhHHHHhHhHHhhhhccCC-c-chhhHHHHHHHHHHHhhh
Q 045073          321 KAGAIVGAFGVQYYTQKGDK-Q-IKQSIITLAVVNFLGFLC  359 (402)
Q Consensus       321 ~~g~~i~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~i~~i~  359 (402)
                      .+|..+||.+.+.+.+..+. + ...+++..++..+++.+.
T Consensus       343 ~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  383 (400)
T PRK11646        343 ALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLA  383 (400)
T ss_pred             HHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence            99999999999999887521 2 335555555555555444

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated

Probab=99.70  E-value=1.6e-15  Score=159.34  Aligned_cols=277  Identities=10%  Similarity=-0.052  Sum_probs=160.7

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHH-hHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMF-GAV   81 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~-~~i   81 (402)
                      ++..+++.|++|+++|++++++.+++..+|.++++.+++++.......              +.....+|++.+.+ ..+
T Consensus       122 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~--------------~~~~~~~~~~~~~~~~~~  187 (1146)
T PRK08633        122 PAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGN--------------TPSEILGRIAPAGLVLLA  187 (1146)
T ss_pred             hHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccc--------------cccccccchHHHHHHHHH
Confidence            556789999999999999999999999999999999999886321100              00012234444444 333


Q ss_pred             HHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073           82 PAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST  161 (402)
Q Consensus        82 ~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (402)
                      .+++.+++.+++||+|....  .+.+++..                      ......++.++. .+++  +.++...+.
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~----------------------~~~~~~~~~~~~-l~~~--~~~~~~~~~  240 (1146)
T PRK08633        188 VAVLGLIFAYRLPKVPAAAP--EVFDKKKY----------------------LFPKLLWRNLKL-LRSD--RVLWLAIIG  240 (1146)
T ss_pred             HHHHHHHHHhcCcCCCCCCc--cccccccc----------------------ccHHHHHHHHHH-HhcC--cHHHHHHHH
Confidence            44445555566888875421  11000000                      000000000111 1111  122222222


Q ss_pred             HHHHHHHHHHHHhhhhhhhh-hcCcchh-hhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHH
Q 045073          162 WFLLDIAFYTINLAQKDIYP-ATGIVRK-AAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL  239 (402)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~  239 (402)
                      .+......+....+.|.++. .+|++.. ..+.            +.....++.+++.++.+++.||+++++.+.++.++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~------------~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~  308 (1146)
T PRK08633        241 LSYFWFISQLAQANFPAYAKEVLGLDNTFQVQY------------LLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALG  308 (1146)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHH------------HHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHH
Confidence            22222233344455666664 4777766 5444            66677788889999999999999998888777766


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH
Q 045073          240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA  319 (402)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~  319 (402)
                      .+++.+++...                     .+. ...++..++.+++.....+...+++.+..|++.||+++|+.+.+
T Consensus       309 ~~~~~~~~~~~---------------------~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~  366 (1146)
T PRK08633        309 LALSLFLLPTA---------------------PSL-ASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFL  366 (1146)
T ss_pred             HHHHHHHHHHh---------------------hhH-HHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHH
Confidence            66665554442                     111 22222222223323333445677888999999999999999999


Q ss_pred             HHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHH
Q 045073          320 GKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFL  355 (402)
Q Consensus       320 ~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  355 (402)
                      ..++.++++.+.+.+... +.++...+++.+.+.++
T Consensus       367 ~~lg~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~  401 (1146)
T PRK08633        367 QNVGMLLFLALTTLFSGL-GLSPAGLFYLIALVTLI  401 (1146)
T ss_pred             HHHHHHHHHHHHHHHHHh-ccCHHHHHHHHHHHHHH
Confidence            999988887766655432 11333445444444333

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=99.69  E-value=4.9e-15  Score=139.63  Aligned_cols=269  Identities=10%  Similarity=0.026  Sum_probs=173.2

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      |.-.+++.|..|+++...+.++.++..++..++||.+++.+.                       ...|-.+.|++.++.
T Consensus       122 PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lv-----------------------a~~G~~~~f~inals  178 (524)
T PF05977_consen  122 PAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILV-----------------------AFFGAAAAFLINALS  178 (524)
T ss_pred             HHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHH-----------------------HHHHHHHHHHHHHHH
Confidence            455788999999999999999999999999999999999987                       335566778876655


Q ss_pred             HHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073           83 AALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW  162 (402)
Q Consensus        83 ~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (402)
                      -++.++....++..+.-   ++..++.-.+.+                         ++-++.....+..+..+...+..
T Consensus       179 fl~~i~~l~~~~~~~~~---~~~~~e~~~~~l-------------------------~~G~ryv~~~~~l~~~l~~~~~~  230 (524)
T PF05977_consen  179 FLISILALLRWKPPPPP---SSLPRERFFSAL-------------------------REGLRYVRSSPPLRSVLLRSFLF  230 (524)
T ss_pred             HHHHHHHHHHccccccc---cccchhhhhhhH-------------------------HHHHHHHhcchHHHHHHHHHHHH
Confidence            44444333333322110   000000000000                         01111111111111222222222


Q ss_pred             HHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHH
Q 045073          163 FLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMS  241 (402)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~  241 (402)
                         ..........+|.+.+ .+|.++...++            +....+++.++|+++.+++.+|+++++++..+.++.+
T Consensus       231 ---~l~~~a~~aLlPl~a~~~l~~~a~~yGl------------l~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a  295 (524)
T PF05977_consen  231 ---NLFASAVWALLPLFARDVLGGGASGYGL------------LLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFA  295 (524)
T ss_pred             ---HHhhhHHHHhhhHHHHHHhCCcHHHHHH------------HHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHH
Confidence               2222233344677765 47777776665            7788899999999999999999999888888887777


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHH
Q 045073          242 ICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGK  321 (402)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~  321 (402)
                      ++++.+++.                      ...+...+..+..+++.........+...+..|++.||++.+++.+...
T Consensus       296 ~~~~~lal~----------------------~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~  353 (524)
T PF05977_consen  296 LALLLLALS----------------------PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFF  353 (524)
T ss_pred             HHHHHHhcc----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHH
Confidence            776666553                      2222323333333333333444556777899999999999999999999


Q ss_pred             HhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee
Q 045073          322 AGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF  361 (402)
Q Consensus       322 ~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~  361 (402)
                      .+..+|..+.|.+.+..  +...++.+.++..+++.++.+
T Consensus       354 g~~~lGsll~G~la~~~--g~~~al~~a~~~lll~~~~~~  391 (524)
T PF05977_consen  354 GGMPLGSLLWGFLADHF--GVRTALLIAGAALLLSALIAL  391 (524)
T ss_pred             HHHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999988  777777777766666655544

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]

Probab=99.67  E-value=5.9e-16  Score=145.10  Aligned_cols=295  Identities=13%  Similarity=0.116  Sum_probs=189.5

Q ss_pred             chhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHH
Q 045073            5 SAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAA   84 (402)
Q Consensus         5 ~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~   84 (402)
                      +.+.+..++ +++|+.+.|+...+.++|..+-+.+.-.+.                       +..|||+.+++.+.+.+
T Consensus       156 aiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~-----------------------~~~G~r~~~l~~~~~~l  211 (509)
T KOG2504|consen  156 AVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLL-----------------------SKYGWRGALLIFGGISL  211 (509)
T ss_pred             hhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHH-----------------------HHhCcHHHHHHHHHHHH
Confidence            344555444 589999999999999999999888888877                       77899999998555555


Q ss_pred             HHHHHHhh-ccCCchhHHhhhCChhHHHHHHHHhccc---ccccc---------------ccCCCCCCCCCc--cccc--
Q 045073           85 LTYYWRMK-MPETARYTALVEGNQKKAAVDMAKVLDT---DLTVA---------------TSAYPVPVSPEA--STYG--  141 (402)
Q Consensus        85 ~~~~~~~~-~pesp~~l~~~~~~~~~~~~~~~~~~~~---~~~~~---------------~~~~~~~~~~~~--~~~~--  141 (402)
                      -.++.... -|.+|+-.   +. .+++.+........   +.+..               .+..++..++..  ....  
T Consensus       212 ~~~~~~~~~rp~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (509)
T KOG2504|consen  212 NVLVAGALLRPLSPPKK---PN-EEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFL  287 (509)
T ss_pred             HHHHHHHHcCCCCcCCC---ch-hhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhh
Confidence            44443333 34333220   11 11110000000000   00000               000000000000  1111  


Q ss_pred             -cchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhH
Q 045073          142 -LFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFT  220 (402)
Q Consensus       142 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  220 (402)
                       .+..+.++.  +.++...+...+...+++....++|.+.++.|++..+...            ...+.++..+++.++.
T Consensus       288 ~~~d~~ll~~--~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~------------l~Siigi~~i~gRi~~  353 (509)
T KOG2504|consen  288 SMLDLSLLKD--PKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAF------------LLSIIGVSDIIGRIIL  353 (509)
T ss_pred             hhhhHHHHcC--chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHH------------HHHHHHHhhhhhhhhh
Confidence             111333333  3566666666777788899999999999999999887665            7888899999999999


Q ss_pred             HHhhhccc--hhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccc
Q 045073          221 VFLIDRIG--RFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFI  298 (402)
Q Consensus       221 g~l~dr~g--rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (402)
                      |++.|+..  ++.+..++.+..+++.+.+...                     .+ ...++.+.+..++...........
T Consensus       354 G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~---------------------~~-~~~l~~~~~~fG~~~g~~~~l~~~  411 (509)
T KOG2504|consen  354 GLLADKPGIRALVLFLLTLLIAGLARLFLPFA---------------------TT-YVGLIVFSILFGFCVGSFSSLTPV  411 (509)
T ss_pred             hhhcCccccchHHHHHHHHHHHHHHHHHHHHh---------------------cc-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999987  4445555555555554333332                     22 233444444444433344444446


Q ss_pred             ccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeee
Q 045073          299 VPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVP  364 (402)
Q Consensus       299 ~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~  364 (402)
                      .+.|+.+.+.-+.+.|+...+..++..+||.+.+.+.|..+ +|...|...+++.+++..+.+..+
T Consensus       412 i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg-~Y~~~f~~~g~~~~~s~~~~~~~~  476 (509)
T KOG2504|consen  412 ILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITG-NYDHAFYFCGLCFLLSAVLLLILR  476 (509)
T ss_pred             HHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccC-CeeeehhhcChHHHHHHHHHHHhH
Confidence            78999999999999999999999999999999999999885 588999999999888887777666

>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator)

Probab=99.66  E-value=5.5e-15  Score=135.51  Aligned_cols=253  Identities=15%  Similarity=0.123  Sum_probs=141.1

Q ss_pred             cchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHH-HH-hHH
Q 045073            4 LSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVL-MF-GAV   81 (402)
Q Consensus         4 ~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f-~~-~~i   81 (402)
                      ....+++|++|+++|++++++...+..+|..+++.++..+........+             .....+||+.| +. +.+
T Consensus       110 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~-------------~~~~~~w~~~~~~~~~~~  176 (366)
T TIGR00886       110 SCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAG-------------LPAHLAWGWAFVIVPAGI  176 (366)
T ss_pred             hHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccc-------------ccccccccchhHHHHHHH
Confidence            4567899999999999999999988888888888887766532211100             01245899999 44 333


Q ss_pred             HHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073           82 PAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST  161 (402)
Q Consensus        82 ~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (402)
                      ..++.++...+.+|+|+.    ++++++. +         ...+...     .+++ ..+..++...++   .++...+.
T Consensus       177 ~~~~~~~~~~~~~~~~~~----~~~~~~~-~---------~~~~~~~-----~~~~-~~~~~~~~~~~~---~~~~~~~~  233 (366)
T TIGR00886       177 LLLPALLIFFVGADTPPG----KPATGKL-S---------FKGARWS-----VGTG-ALGDQLKVFRDR---HTWILALL  233 (366)
T ss_pred             HHHHHHHHHHhcccCCcc----cccchhc-c---------ccccccc-----ccch-hHHHHHHHHhcc---chhhHHHH
Confidence            334444445556776642    1100000 0         0000000     0000 000011111111   23333333


Q ss_pred             HHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHH
Q 045073          162 WFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM  240 (402)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~  240 (402)
                      .+......+....+.|.++++ +|+++.+.+.            ......+..+++.++.|++.||+|||+.+..+....
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------------~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~  301 (366)
T TIGR00886       234 YSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGA------------YASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGV  301 (366)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHH------------HHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHH
Confidence            333344555666777878754 6887766544            556667778888999999999999988777766555


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHH
Q 045073          241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAG  320 (402)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~  320 (402)
                      ..+..++.....   ..              .+.............+.+. ..+..+.+.++..| +.++++.|+.+..+
T Consensus       302 ~~~~~~~~~~~~---~~--------------~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~-~~~g~~~g~~~~~~  362 (366)
T TIGR00886       302 AMGAFLVVLGLV---SP--------------LSLAVFIVLFVALFFFSGA-GNGSTFALVPHIFR-RATGAVSGLVGAIG  362 (366)
T ss_pred             HHHHHHHHhcCC---Cc--------------chHHHHHHHHHHHHHHhcc-ccchhhhcchhhch-hhcccHHHHHHHhc
Confidence            554444333211   00              0122222222222222222 23456677788887 68999999998887


Q ss_pred             HHh
Q 045073          321 KAG  323 (402)
Q Consensus       321 ~~g  323 (402)
                      ++|
T Consensus       363 ~~g  365 (366)
T TIGR00886       363 NLG  365 (366)
T ss_pred             cCC
Confidence            765

>TIGR00896 CynX cyanate transporter

Probab=99.65  E-value=3.9e-14  Score=129.29  Aligned_cols=242  Identities=13%  Similarity=0.075  Sum_probs=148.6

Q ss_pred             cchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHH
Q 045073            4 LSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPA   83 (402)
Q Consensus         4 ~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~   83 (402)
                      ....++.|++| ++|++++++.+.+..+|..+++.++..+...                     ...+||+.|.+.++..
T Consensus       107 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~---------------------~~~~w~~~f~~~~~~~  164 (355)
T TIGR00896       107 LLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQH---------------------SGGHWQQALAWWALPA  164 (355)
T ss_pred             cchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------------hhhhHHHHHHHHHHHH
Confidence            44567788886 6899999999999999999999988877511                     1124999988755544


Q ss_pred             HHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHHH
Q 045073           84 ALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWF  163 (402)
Q Consensus        84 ~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (402)
                      ++...  .++||+++.     +++++                  +     ..+...++.+++    +   ..+......+
T Consensus       165 ~~~~~--~~~~~~~~~-----~~~~~------------------~-----~~~~~~~~~~~~----~---~~~~~~~~~~  207 (355)
T TIGR00896       165 LLALL--AWIPQVRRR-----VAANQ------------------T-----TTRLTPVRIWRS----P---LAWQVTVFFG  207 (355)
T ss_pred             HHHHH--HHhhhhccc-----cCCCC------------------C-----CCCCCCchhhcC----H---hHHHHHHHHH
Confidence            43322  234443210     00000                  0     000011111111    1   2233333334


Q ss_pred             HHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhcc-chhHHHHHHHHHHHH
Q 045073          164 LLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRI-GRFIIQLGGFLLMSI  242 (402)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-grr~~~~~~~~~~~~  242 (402)
                      .....++....+.|.++++.|++..+.+.            ......++.++++++.|++.||+ +||+.+..+..+.++
T Consensus       208 ~~~~~~~~~~~~lp~~~~~~g~~~~~~g~------------~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~  275 (355)
T TIGR00896       208 LQSGLYYSLIGWLPAILISHGASAATAGS------------LLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLV  275 (355)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHH
Confidence            44456667777889999888888776554            67777888999999999999999 566666666666666


Q ss_pred             HHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccc-cccchhhhhhhHHHHHHH
Q 045073          243 CMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAEL-FPARLRSTCHGISAAAGK  321 (402)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~-~p~~~r~~~~~~~~~~~~  321 (402)
                      +.+.+....                    ... ...  .....+.+.....+...+...+. .+++.++...++.+.++.
T Consensus       276 ~~~~~~~~~--------------------~~~-~~~--~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  332 (355)
T TIGR00896       276 GLCGLLFAP--------------------MHG-LWA--WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGY  332 (355)
T ss_pred             HHHHHHHhh--------------------hhH-HHH--HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence            554444321                    111 111  11222222333334444444444 445777899999999999


Q ss_pred             HhHHHHhHhHHhhhhccC
Q 045073          322 AGAIVGAFGVQYYTQKGD  339 (402)
Q Consensus       322 ~g~~i~~~~~~~~~~~~~  339 (402)
                      ++..++|.+.+.+.+..+
T Consensus       333 ~~~~~gp~~~G~l~~~~g  350 (355)
T TIGR00896       333 LLAALGPLFVGVLHDISG  350 (355)
T ss_pred             HHHHHHHHHHHHHHHHhc
Confidence            999999999999998764

This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.

>PRK15403 multidrug efflux system protein MdtM; Provisional

Probab=99.64  E-value=7.1e-14  Score=129.95  Aligned_cols=261  Identities=13%  Similarity=0.005  Sum_probs=145.2

Q ss_pred             chhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHH
Q 045073            5 SAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAA   84 (402)
Q Consensus         5 ~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~   84 (402)
                      ..+++.|++|+++|++++++...+..+|..+++.+++.+.                       +..+||+.|++.++..+
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~-----------------------~~~gw~~~f~~~~~~~~  181 (413)
T PRK15403        125 GYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALM-----------------------HFVHWKVLFAIIAVMGL  181 (413)
T ss_pred             HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------HhcCHHHHHHHHHHHHH
Confidence            4567889999999999999999999999999999998876                       45789999999777766


Q ss_pred             HHHHH-HhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHHH
Q 045073           85 LTYYW-RMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWF  163 (402)
Q Consensus        85 ~~~~~-~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (402)
                      +.++. .+++||+++.    ++++.+....                          ++.++ ...++  +.++...+...
T Consensus       182 i~~~~~~~~lp~~~~~----~~~~~~~~~~--------------------------~~~~~-~ll~~--~~~~~~~l~~~  228 (413)
T PRK15403        182 IAFVGLLLAMPETVKR----GAVPFSAKSV--------------------------LRDFR-NVFRN--RLFLTGAATLS  228 (413)
T ss_pred             HHHHHHHHhCCCCccc----cCCCCChHHH--------------------------HHHHH-HHHcC--HHHHHHHHHHH
Confidence            65543 4568887531    1110000000                          00001 11121  23343444444


Q ss_pred             HHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhh-hccchhHHHHHHHHHHH
Q 045073          164 LLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLI-DRIGRFIIQLGGFLLMS  241 (402)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~-dr~grr~~~~~~~~~~~  241 (402)
                      ......+....+.|.++++ .|.+..+.+.            .......+.++++.+.+.+. |+.++|. ......+..
T Consensus       229 ~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl------------~~~~~~~~~~i~~~l~~~~~~~~~~~~~-~~~~~~~~~  295 (413)
T PRK15403        229 LSYIPMMSWVAVSPVILIDAGGMTTSQFAW------------TQVPVFGAVIVANAIVARFVKDPTEPRF-IWRAVPIQL  295 (413)
T ss_pred             HHHHHHHHHHHhChHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHhccCCchhH-HHHHHHHHH
Confidence            4455556666777888766 5788776554            44455566666666677665 4444443 322222222


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHH
Q 045073          242 ICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGK  321 (402)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~  321 (402)
                      ++..++...... . .              ...+.......+. +.+.....+......-. -....+|++.++.+....
T Consensus       296 ig~~l~~~~~~~-~-~--------------~~~~~~~~~~~l~-~~G~~~~~p~~~~~al~-~~~~~~G~a~a~~~~~~~  357 (413)
T PRK15403        296 VGLALLIVGNLL-W-P--------------HVWLWSVLGTSLY-AFGIGLIFPTLFRFTLF-SNNLPKGTVSASLNMVIL  357 (413)
T ss_pred             HHHHHHHHHHHH-c-c--------------ccHHHHHHHHHHH-HHHHHHHhHHHHHHHhc-cCCCCCcHHHHHHHHHHH
Confidence            332222221100 0 1              1111111211111 11111222223211111 112237999999999998


Q ss_pred             HhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHH
Q 045073          322 AGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFL  355 (402)
Q Consensus       322 ~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  355 (402)
                      .+..+++...+++.+.   +....|...+++..+
T Consensus       358 ~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~  388 (413)
T PRK15403        358 MVMAVSVEIGRWLWFN---GGRLPFHLLAVVAGV  388 (413)
T ss_pred             HHHHHHHHHHHHHHHc---CCchHHHHHHHHHHH
Confidence            8888999888888765   445555555544443

>TIGR00882 2A0105 oligosaccharide:H+ symporter

Probab=99.63  E-value=2.3e-14  Score=132.81  Aligned_cols=132  Identities=15%  Similarity=0.004  Sum_probs=89.3

Q ss_pred             HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073          205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT  284 (402)
Q Consensus       205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (402)
                      ......+...++....+++.||+|||+.+.++..+.++...+....                     .+.+.. .+....
T Consensus       259 ~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~---------------------~~~~~~-~~~~~l  316 (396)
T TIGR00882       259 VTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFA---------------------TTALEV-VILKML  316 (396)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhc---------------------CChHHH-HHHHHH
Confidence            4555666777778889999999999999888877666655443321                     122222 222222


Q ss_pred             HHHHhhCCccccccccccccccchhhhhhhH-HHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhe
Q 045073          285 LFFANFGPNSTTFIVPAELFPARLRSTCHGI-SAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCS  360 (402)
Q Consensus       285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~-~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~  360 (402)
                      .+............+..+..|++.++++.+. .+....+|+++++.+.+.+.+..  |+..+|.+.+++.+++.++.
T Consensus       317 ~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~--G~~~~f~~~~~~~~i~~~~~  391 (396)
T TIGR00882       317 HAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSI--GFQGAYLVLGCIVLLFTLIS  391 (396)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhc--ccHHHHHHHHHHHHHHHHHH
Confidence            2222111122334456777888888887776 56788999999999999999987  88999998888877665543

>PRK11652 emrD multidrug resistance protein D; Provisional

Probab=99.62  E-value=1.1e-13  Score=128.26  Aligned_cols=242  Identities=14%  Similarity=0.109  Sum_probs=137.9

Q ss_pred             chhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHH
Q 045073            5 SAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAA   84 (402)
Q Consensus         5 ~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~   84 (402)
                      ...+..|.+++++|+++.++.+.+..+|..+++.+++.+.                       +..+||+.|++.++..+
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~-----------------------~~~g~~~~f~~~~~~~~  173 (394)
T PRK11652        117 ARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLT-----------------------TLFGWRACYLFLLLLGA  173 (394)
T ss_pred             HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------hccChHHHHHHHHHHHH
Confidence            3456788899999999999999999999999999998876                       55789999998766555


Q ss_pred             H-HHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHHH
Q 045073           85 L-TYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWF  163 (402)
Q Consensus        85 ~-~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (402)
                      + .++..+++||+|+.    ++++.+..+..                             +...+++..+..+...+.  
T Consensus       174 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~--  218 (394)
T PRK11652        174 GVTFSMARWMPETRPA----DARRTRVLASY-----------------------------RTLLSNRRFNCYLLMLIG--  218 (394)
T ss_pred             HHHHHHHHhCCccCcc----ccchhHHHHHH-----------------------------HHHHcChHHHHHHHHHHH--
Confidence            4 34445567887532    11111100000                             111111111111211111  


Q ss_pred             HHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHH
Q 045073          164 LLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSI  242 (402)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~  242 (402)
                       ..........+.+.++++ +|.++...+.            ......++.+++..+.+++.||++++....  .....+
T Consensus       219 -~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------------~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~--~~~~~~  283 (394)
T PRK11652        219 -TLAGIAVFEACSGVLMGAVLGLSSMTVSI------------LFILPIPAAFFGAWFAGRPNKRFSTLMWQS--VICCLL  283 (394)
T ss_pred             -HHHHHHHHHHhChHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHH
Confidence             112222223344556655 7777665443            455566777777788888888887433322  222222


Q ss_pred             HHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHH
Q 045073          243 CMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKA  322 (402)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~  322 (402)
                      +.+....... ...               ... ..........+.+.....+...++..|.+| +.++++.++.+....+
T Consensus       284 ~~~~~~~~~~-~~~---------------~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~l  345 (394)
T PRK11652        284 AGLLMWIPGW-FGV---------------MNV-WTLLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNI  345 (394)
T ss_pred             HHHHHHHHHH-hcc---------------ccH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHH
Confidence            2222111111 000               111 222222222222223345566677778887 5789999999999999


Q ss_pred             hHHHHhHhHHhhhhc
Q 045073          323 GAIVGAFGVQYYTQK  337 (402)
Q Consensus       323 g~~i~~~~~~~~~~~  337 (402)
                      |+.+++.+.+.+...
T Consensus       346 g~~~~~~~~~~~~~~  360 (394)
T PRK11652        346 GSGLAALLSAMLPQT  360 (394)
T ss_pred             HHHHHHHHHHHccCC
Confidence            999999888877553

>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]

Probab=99.61  E-value=9e-14  Score=119.92  Aligned_cols=262  Identities=16%  Similarity=0.139  Sum_probs=179.5

Q ss_pred             chhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHH
Q 045073            5 SAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAA   84 (402)
Q Consensus         5 ~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~   84 (402)
                      .+..+-+.+| |+-+..++++.+..++|..+++.+...+..                      ...+||....+-+++++
T Consensus       120 LPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~----------------------~~~gW~~aL~~WAl~al  176 (395)
T COG2807         120 LPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQ----------------------HSGGWRGALGFWALLAL  176 (395)
T ss_pred             hhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHH----------------------hhccHHHHHHHHHHHHH
Confidence            4667788888 566999999999999999999999988862                      22579999999888988


Q ss_pred             HHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHHHH
Q 045073           85 LTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFL  164 (402)
Q Consensus        85 ~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (402)
                      +.++.++  |...|.     +....+                       .+..+..+++++       +..+.+.+.+-.
T Consensus       177 lAl~~Wl--Pq~~r~-----~~~~~~-----------------------~~~~~~~~vw~~-------~~aW~vtLfmGl  219 (395)
T COG2807         177 LALLIWL--PQALRE-----QAASIA-----------------------TKLVSVRKVWRS-------PLAWQVTLFMGL  219 (395)
T ss_pred             HHHHHHh--hhcccc-----cccccc-----------------------cccccccccccC-------chhHHHHHHHHh
Confidence            8877643  332211     000000                       111111122222       256666777777


Q ss_pred             HHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccc-hhHHHHHHHHHHHHH
Q 045073          165 LDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIG-RFIIQLGGFLLMSIC  243 (402)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g-rr~~~~~~~~~~~~~  243 (402)
                      ++..+|....|+|.++.+.|+|..+++.            ...+..+.+++.++....+.+|.. +|+.......++.++
T Consensus       220 qS~~~Y~~~~WLP~ili~~G~sa~~aG~------------llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G  287 (395)
T COG2807         220 QSLLYYIVIGWLPAILIDRGLSAAEAGS------------LLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVG  287 (395)
T ss_pred             hHHHHHHHHHHHHHHHHHcCCCHHHhhh------------HHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHH
Confidence            8889999999999999999999998776            778888889999999999999754 566666555555555


Q ss_pred             HHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccccccccc-ccchhhhhhhHHHHHHHH
Q 045073          244 MAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELF-PARLRSTCHGISAAAGKA  322 (402)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~~~  322 (402)
                      .+.+.+..    .               ...+.+.    +..+.+..+.++...+.+.... .++..+.-.|+.+.++++
T Consensus       288 ~~G~~~~P----~---------------~~~~lw~----~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYl  344 (395)
T COG2807         288 LVGLLLAP----G---------------QLPILWA----LLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYL  344 (395)
T ss_pred             HHHHHHhh----h---------------hHHHHHH----HHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHH
Confidence            54444321    0               1222221    2222223344444444444443 345567778999999999


Q ss_pred             hHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheee
Q 045073          323 GAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFM  362 (402)
Q Consensus       323 g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~  362 (402)
                      -..+||.++|.+.|..+ +|...+..+++..++..+.-+.
T Consensus       345 lAa~GP~l~G~lhDa~g-sw~~~~~~l~~~~i~m~i~Gl~  383 (395)
T COG2807         345 LAAFGPWLFGFLHDATG-SWSAPLVLLALATLLMLIFGLR  383 (395)
T ss_pred             HHhhhhhhHhHHHHhcC-ChHHHHHHHHHHHHHHHHHHhh
Confidence            99999999999999987 8888888777777666655543

>TIGR02332 HpaX 4-hydroxyphenylacetate permease

Probab=99.61  E-value=2.9e-14  Score=132.59  Aligned_cols=183  Identities=12%  Similarity=0.010  Sum_probs=135.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhH
Q 045073          152 GLHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFI  231 (402)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~  231 (402)
                      ++.+...++.++.............|.+.+++|++..+.+.            ......++..++.+..|++.||+|||+
T Consensus         7 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~------------~~s~~~~~~~~~~~~~g~l~dr~G~r~   74 (412)
T TIGR02332         7 RRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGL------------AATLFYAAYVICGIPSNIMLAIIGARR   74 (412)
T ss_pred             hHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHH------------HHHHHHHHHHHHHhhHHHHHHHhChHH
Confidence            34555666666666666667777778888899999887666            677777888888889999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhh
Q 045073          232 IQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRST  311 (402)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~  311 (402)
                      ++..+.++.+++.++..+.                     .+ ...+.+.....+.+..+..+....++.|.+|++.|++
T Consensus        75 ~~~~~~~~~~~~~~~~~~~---------------------~~-~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~  132 (412)
T TIGR02332        75 WIAGIMVLWGIASTATMFA---------------------TG-PESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRAR  132 (412)
T ss_pred             HHHHHHHHHHHHHHHHHHh---------------------cC-HHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHH
Confidence            9999988888877776653                     22 2333333444444444455666778899999999999


Q ss_pred             hhhHHHHHHHHhHHHHhHhHHhhhhcc----CCcchhhHHHHHHHHHHHhhhe-eeeeccCC
Q 045073          312 CHGISAAAGKAGAIVGAFGVQYYTQKG----DKQIKQSIITLAVVNFLGFLCS-FMVPETNG  368 (402)
Q Consensus       312 ~~~~~~~~~~~g~~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~i~~-~~~~et~~  368 (402)
                      +.++.+....+|..+++.+.+.+.+..    ..+|++.|.+.++..++..++. +++||++.
T Consensus       133 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~  194 (412)
T TIGR02332       133 ANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPD  194 (412)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence            999999999999999999888776420    0189999999888776654444 45577654

This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.

>TIGR00885 fucP L-fucose:H+ symporter permease

Probab=99.60  E-value=2.6e-13  Score=125.76  Aligned_cols=280  Identities=9%  Similarity=-0.055  Sum_probs=153.8

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcc-ccccccc--ccCCCCCchhHHHHHHh
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPA-FNRNHVL--SAQPQGDYLWRIVLMFG   79 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~Wr~~f~~~   79 (402)
                      +....++.+..|+++|++.+++.+...++|..+++.++..+........+.+. ....|..  .....+..+||++|++.
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~  192 (410)
T TIGR00885       113 TAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMII  192 (410)
T ss_pred             hhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence            34567888999999999999999999999999999998887532100000000 0000000  00000235799999886


Q ss_pred             HHHHHHHHHHHhh--ccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHH
Q 045073           80 AVPAALTYYWRMK--MPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLG  157 (402)
Q Consensus        80 ~i~~~~~~~~~~~--~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (402)
                      ++..++..+...+  +||.++      +++++.                       +    ..+. .+...+++  .+..
T Consensus       193 a~~~~~~~~~~~~~~~p~~~~------~~~~~~-----------------------~----~~~~-~~~~~~~~--~~~~  236 (410)
T TIGR00885       193 GAVVLAVALLIMLTKMPALNH------SDAKQI-----------------------S----FSAS-LSRLARIR--HYRE  236 (410)
T ss_pred             HHHHHHHHHHHHHhcCCCCCc------cccccc-----------------------c----chhh-HHHHHhCh--hHHH
Confidence            6655544333322  443211      000000                       0    0000 11111111  1222


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHH
Q 045073          158 TTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGF  237 (402)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~  237 (402)
                      .....+...........+++.+.++.+...+. +         .+............+|+++++++.||+++|+++.++.
T Consensus       237 ~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~-~---------~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~  306 (410)
T TIGR00885       237 GVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTA-G---------FAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYA  306 (410)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCH-H---------HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence            22223333333444556777777654322211 1         1111334444667889999999999999999888877


Q ss_pred             HHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHH
Q 045073          238 LLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISA  317 (402)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~  317 (402)
                      .+..++.++....                     .+... ...+.....+ ....+|..++...+..+++.+..+.++..
T Consensus       307 ~~~~~~~ll~~~~---------------------~~~~~-~~~l~~~glf-~s~~fp~i~sl~~~~~g~~~~~~s~~l~~  363 (410)
T TIGR00885       307 IIGMALCLGSIFA---------------------GGHVG-LYCLTLCSAF-MSLMFPTIYGIALKGLGQDTKYGAAGLVM  363 (410)
T ss_pred             HHHHHHHHHHHHc---------------------CChHH-HHHHHHHHHH-HHHHHHHHHHHHHhhhhhhhhhhHHHHHH
Confidence            7666665554442                     12122 2222222233 33445788889999999877655555555


Q ss_pred             HHHHHhHHHHhHhHHhhhhccC---C-cchhhHHHHHHHH
Q 045073          318 AAGKAGAIVGAFGVQYYTQKGD---K-QIKQSIITLAVVN  353 (402)
Q Consensus       318 ~~~~~g~~i~~~~~~~~~~~~~---~-~~~~~~~~~~~~~  353 (402)
                      ..  +|+.+.|.+.|.+.|..+   . +.+..|++..++.
T Consensus       364 ~~--~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~  401 (410)
T TIGR00885       364 AI--IGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCF  401 (410)
T ss_pred             HH--hccchHHHHHHHHHHHhcccccCccchHHHHHHHHH
Confidence            44  899999999999999531   0 3556666544433

This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.

>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]

Probab=99.60  E-value=1.4e-15  Score=135.04  Aligned_cols=261  Identities=14%  Similarity=0.109  Sum_probs=143.2

Q ss_pred             CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073            2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV   81 (402)
Q Consensus         2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i   81 (402)
                      .|+++++++|.+|..+|++++++++.+.++|..+|.+.+..+..                      ....|||.|...++
T Consensus       139 ~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~----------------------~~~~Wr~af~~~av  196 (493)
T KOG1330|consen  139 SPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVAS----------------------LTFWWRWAFRGSAV  196 (493)
T ss_pred             cccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeecc----------------------CccceEEEEEeehH
Confidence            36789999999999999999999999999999999998887752                      22239999999777


Q ss_pred             HHHHH-HHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhh-hhHHHHHHH
Q 045073           82 PAALT-YYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQK-HGLHLLGTT  159 (402)
Q Consensus        82 ~~~~~-~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  159 (402)
                      ++++. ++.+++++|.+|-      .+++.                +...+......+.++..+.....+ .....+...
T Consensus       197 l~vi~~~L~~~f~~eP~rg------a~~~~----------------~~~~~~~~~~ts~~kDl~~l~~~~v~v~~sl~~~  254 (493)
T KOG1330|consen  197 LGVIVGLLVFLFVREPERG------ARDEV----------------DGENKMVKPFTSVWKDLKVLAKIKVFVLSSLGII  254 (493)
T ss_pred             HHHHHHHHHHhhccCcccc------ccccc----------------ccCCcCCCCccchHHHHHHHHccCceeeehHHHH
Confidence            77764 4455667775431      11110                000000112223333333332211 111222222


Q ss_pred             HHHHHHHHHHHHHHhhhhhhh----hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchh----H
Q 045073          160 STWFLLDIAFYTINLAQKDIY----PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRF----I  231 (402)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr----~  231 (402)
                      ...+..    -+...|.|.+.    +-.|.+...            +.++..+...++.+|.+++|.++||+.|+    .
T Consensus       255 a~~fv~----Gs~sww~p~~~~~~~~~~~~~~~~------------~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~  318 (493)
T KOG1330|consen  255 AAQFVI----GSLSWWAPAFIYYSYELIGFDHNA------------TLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSG  318 (493)
T ss_pred             HHHHhc----cccchhhhhHHHHHHHHhCCcccc------------chhhhhHHHhhchhhheehHHHHHHHHHhccccc
Confidence            222222    22233334333    224444332            23367777888888999999999995332    1


Q ss_pred             HHHHHHHHHHHH----HHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccc
Q 045073          232 IQLGGFLLMSIC----MAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPAR  307 (402)
Q Consensus       232 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~  307 (402)
                      ......+..+.+    ...+.....  ...              ...+..++++.+........+ +...-+..|+.|++
T Consensus       319 ~~~~~q~~~~~g~~~s~~~L~~~~~--~~~--------------~s~~~~~il~~~g~~~~~~~~-a~n~~i~l~vV~p~  381 (493)
T KOG1330|consen  319 TLRASQLSAALGAPLSIPFLFLFPA--FTS--------------SSMIFGLILFLVGETISWFNW-ATNNPIFLEVVPPS  381 (493)
T ss_pred             chhHHHHHHhhhhhHHHHHHHHHHh--hhh--------------HHHHHHHHHHHHHHHHHhccc-ccccceeeEecCcc
Confidence            111111111111    111111110  000              222222232222222222233 34445668899999


Q ss_pred             hhhhhhhHHHHHHHHhH-HHHhHhHHhhhhccC
Q 045073          308 LRSTCHGISAAAGKAGA-IVGAFGVQYYTQKGD  339 (402)
Q Consensus       308 ~r~~~~~~~~~~~~~g~-~i~~~~~~~~~~~~~  339 (402)
                      .|.++.++...+..+.+ +-+|.+.|.+.++..
T Consensus       382 ~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~  414 (493)
T KOG1330|consen  382 RRTTAYALDTVFEHIFGDAASPYIVGILSDKLR  414 (493)
T ss_pred             cccHHHHHHHHHHHHhccCCCcceehhHHHHhh
Confidence            99999999888877644 455668888887654

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]

Probab=99.59  E-value=1.6e-14  Score=127.04  Aligned_cols=183  Identities=11%  Similarity=0.085  Sum_probs=146.4

Q ss_pred             hhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhh
Q 045073          145 KEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLI  224 (402)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~  224 (402)
                      +.++|.+++.++.+++.+......--.+..-.|.+.++.|++..+.+.            +.+...+..-++.++.|.++
T Consensus        21 ~~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~------------i~s~f~i~YG~sKf~~G~~s   88 (448)
T COG2271          21 KTYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGI------------LGSAFSITYGVSKFVMGVLS   88 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHhhhhc
Confidence            344445555667777777777777777788889999999999998776            67777788888888999999


Q ss_pred             hccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccccccccc
Q 045073          225 DRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELF  304 (402)
Q Consensus       225 dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~  304 (402)
                      ||.+.|..+.++++++++..+++++.                      ++...+.++....+.+...-.|.+...++..+
T Consensus        89 Dr~npr~fm~~gLilsai~nil~Gfs----------------------~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wf  146 (448)
T COG2271          89 DRSNPRYFMAFGLILSAIVNILFGFS----------------------PSLFLFAVLWVLNGWFQGMGWPPCARTITHWF  146 (448)
T ss_pred             ccCCCceeehHHHHHHHHHHHHHhhh----------------------hHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHc
Confidence            99999999999999999999988884                      33444444444555545545567778889999


Q ss_pred             ccchhhhhhhHHHHHHHHhHHHHhHhH--HhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073          305 PARLRSTCHGISAAAGKAGAIVGAFGV--QYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV  363 (402)
Q Consensus       305 p~~~r~~~~~~~~~~~~~g~~i~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~  363 (402)
                      |++.||+..++-++..++|+.+.|.+.  +....+.  +|+..|++-++++++..++.+++
T Consensus       147 sr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~--~w~~~f~~pgiiaiival~~~~~  205 (448)
T COG2271         147 SRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHG--GWRAAFYFPGIIAIIVALILLFL  205 (448)
T ss_pred             CccccCceEEEehhhhhcccchHHHHHHHHHHHhcc--chhHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999888  7777776  89999999999888766666654

>PRK10133 L-fucose transporter; Provisional

Probab=99.59  E-value=3.1e-13  Score=126.35  Aligned_cols=283  Identities=11%  Similarity=-0.023  Sum_probs=154.4

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCccc-ccccccccCCCC--CchhHHHHHH-
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAF-NRNHVLSAQPQG--DYLWRIVLMF-   78 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~Wr~~f~~-   78 (402)
                      +.+..++.|+.|+++|++.+++.+..+.+|..+++.++..+.....+....+.. ...+........  ..+||++|+. 
T Consensus       136 ~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~  215 (438)
T PRK10133        136 TAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMII  215 (438)
T ss_pred             hhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHH
Confidence            455778889888888878899999999999999999987664110000000000 000000000000  0367777764 


Q ss_pred             hHHHHHHHHHH-HhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHH
Q 045073           79 GAVPAALTYYW-RMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLG  157 (402)
Q Consensus        79 ~~i~~~~~~~~-~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (402)
                      ..+..++.++. ...+||.|.-    ++ .++.                         .....+..+ +..+++  .+..
T Consensus       216 ~~v~~~~~~~~~~~~~p~~~~~----~~-~~~~-------------------------~~~~~~~~~-~ll~~~--~~~~  262 (438)
T PRK10133        216 VAIVLLVALLIMLTKFPALQSD----NH-SDAK-------------------------QGSFSASLS-RLARIR--HWRW  262 (438)
T ss_pred             HHHHHHHHHHHHHhcCCCCCcc----cc-cccc-------------------------ccchhhhHH-HHHhCc--hHHH
Confidence            33333333222 3335543210    00 0000                         000000001 111111  1111


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhh-h-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHH
Q 045073          158 TTSTWFLLDIAFYTINLAQKDIY-P-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLG  235 (402)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~-~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~  235 (402)
                      ..+..++.....++...|.+.++ + ..|.++.+.+.            ......++.++|+++++++.||+|||+++..
T Consensus       263 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~------------~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~  330 (438)
T PRK10133        263 AVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAAN------------YLTGTMVCFFIGRFTGTWLISRFAPHKVLAA  330 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence            22222333334444445666663 4 47888887665            7788888999999999999999999999888


Q ss_pred             HHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhH
Q 045073          236 GFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGI  315 (402)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~  315 (402)
                      +..+..+.+.+....                     ..... ... ....+++.....|..++...+.+|++ .+++.++
T Consensus       331 ~~~~~~~~~~~~~~~---------------------~~~~~-~~~-~~l~glg~~~i~P~~~s~a~~~~~~~-~~~as~l  386 (438)
T PRK10133        331 YALIAMALCLISAFA---------------------GGHVG-LIA-LTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSF  386 (438)
T ss_pred             HHHHHHHHHHHHHHc---------------------CChHH-HHH-HHHHHHHHHHHHHHHHHHHHcccchh-hccchhH
Confidence            766655444333221                     11111 112 22233334555678888888888764 5777777


Q ss_pred             HHHHHHHhHHHHhHhHHhhhhccCCc-chhhHHHHHHHHHHHh
Q 045073          316 SAAAGKAGAIVGAFGVQYYTQKGDKQ-IKQSIITLAVVNFLGF  357 (402)
Q Consensus       316 ~~~~~~~g~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~  357 (402)
                      .. ...+|+.++|.+.+.+.+..  + .+..|++..++.+...
T Consensus       387 ~~-~~~~g~~~~~~i~G~l~~~~--g~~~~~~~v~~~~~~~~~  426 (438)
T PRK10133        387 IV-MTIIGGGIVTPVMGFVSDAA--GNIPTAELIPALCFAVIF  426 (438)
T ss_pred             Hh-HHhccchHHHHHHHHHHHhc--cchHHHHHHHHHHHHHHH
Confidence            76 45578888999999988876  5 6667765554444333

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=99.59  E-value=3.7e-14  Score=138.32  Aligned_cols=181  Identities=14%  Similarity=0.055  Sum_probs=129.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHH
Q 045073          153 LHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFII  232 (402)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~  232 (402)
                      ..++.+.+..+........+...+|.+..++|.+..+.+.            +.+...++.++|.+++|+++||+|||+.
T Consensus       167 ~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~------------l~s~~~lG~iiG~li~G~LsDR~GRR~~  234 (742)
T TIGR01299       167 ALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGM------------LGLIVYLGMMVGAFFWGGLADKLGRKQC  234 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCcHHH
Confidence            3334444444444444445566678887888888776554            6677788899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhh
Q 045073          233 QLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTC  312 (402)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~  312 (402)
                      ++++.++.+++.++.++.                     .+ ...+++..++.+++..+..+...+++.|.+|++.|+..
T Consensus       235 lii~lil~~i~~ll~afa---------------------~s-~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~  292 (742)
T TIGR01299       235 LLICLSVNGFFAFFSSFV---------------------QG-YGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEH  292 (742)
T ss_pred             HHHHHHHHHHHHHHHHHH---------------------hh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Confidence            999888777776665543                     12 23333344444444455567888999999999999999


Q ss_pred             hhHHHHHHHHhHHHHhHhHHhhhhccC-----------CcchhhHHHHHHHHHHHhhheeeeeccC
Q 045073          313 HGISAAAGKAGAIVGAFGVQYYTQKGD-----------KQIKQSIITLAVVNFLGFLCSFMVPETN  367 (402)
Q Consensus       313 ~~~~~~~~~~g~~i~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~i~~i~~~~~~et~  367 (402)
                      .++...+..+|.++++.+...+....+           .+|++.+++.++..++.+++.+++||+.
T Consensus       293 ~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESP  358 (742)
T TIGR01299       293 LSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESP  358 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence            999999999999988876655543221           1678888887777777766666779874

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

>TIGR00895 2A0115 benzoate transport

Probab=99.58  E-value=2.9e-14  Score=132.12  Aligned_cols=179  Identities=19%  Similarity=0.181  Sum_probs=129.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073          154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ  233 (402)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~  233 (402)
                      .+.......+...........+.|.+.+++|.+..+.+.            ......++.+++.++.|+++||+|||+.+
T Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~g~l~d~~g~~~~~   85 (398)
T TIGR00895        18 AIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGF------------LFSAGLIGMAFGALFFGPLADRIGRKRVL   85 (398)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHH------------HHHHHHHHHHHHHHHhHHHHHHhhhHHHH
Confidence            344444445555555566667788888889988876554            66677788889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073          234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH  313 (402)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~  313 (402)
                      ..+.++.+++.++....                     .+ .....+.....+.+.....+...++..|.+|++.|+++.
T Consensus        86 ~~~~~~~~~~~~~~~~~---------------------~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~  143 (398)
T TIGR00895        86 LWSILLFSVFTLLCALA---------------------TN-VTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAV  143 (398)
T ss_pred             HHHHHHHHHHHHHHHHc---------------------cc-hHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhH
Confidence            98887777766655542                     12 223333333334434445567788899999999999999


Q ss_pred             hHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhe-eeeeccCC
Q 045073          314 GISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCS-FMVPETNG  368 (402)
Q Consensus       314 ~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~-~~~~et~~  368 (402)
                      ++......+|..+++.+.+.+.+..  +|+..+++.+++.++..++. .++||+..
T Consensus       144 ~~~~~~~~~g~~~~~~~~~~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (398)
T TIGR00895       144 GLMFCGYPIGAAVGGFLAGWLIPVF--GWRSLFYVGGIAPLLLLLLLMRFLPESID  197 (398)
T ss_pred             hhHhhHHHHHHHHHHHHHHHHhhcc--cceeehhhhhhHHHHHHHHHHHhCCCCCh
Confidence            9999999999999999999888776  88888888765555444443 34576543

>PRK10429 melibiose:sodium symporter; Provisional

Probab=99.57  E-value=3e-13  Score=128.07  Aligned_cols=258  Identities=11%  Similarity=-0.004  Sum_probs=140.5

Q ss_pred             hhhhhhcc-CcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHH
Q 045073            6 AVIMSEYA-NKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAA   84 (402)
Q Consensus         6 ~~~i~e~~-~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~   84 (402)
                      .+++.|.. ++++|.+..+....+..+|..+.+.+...+...++.                .....+|+....+.++..+
T Consensus       128 ~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~----------------~~~~~g~~~~~~i~~~~~~  191 (473)
T PRK10429        128 WSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGG----------------GDRGFGFQMFTLVLIAFFI  191 (473)
T ss_pred             HhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----------------CchhhhHHHHHHHHHHHHH
Confidence            35778988 689999999987777788776666655544322221                1133478888877666555


Q ss_pred             HHHHH-HhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHHH
Q 045073           85 LTYYW-RMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWF  163 (402)
Q Consensus        85 ~~~~~-~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (402)
                      +..+. .+..+|.+..  . +.+.++                        +++...++.++.. +++  +.+.......+
T Consensus       192 ~~~~~~~~~~~e~~~~--~-~~~~~~------------------------~~~~~~~~~~~~~-~~n--~~~~~ll~~~~  241 (473)
T PRK10429        192 VSTIITLRNVHEVYSS--D-NQVSAE------------------------GSHLTLKDIVALI-YKN--DQLSCLLGMAL  241 (473)
T ss_pred             HHHHHHHcCceecCCc--c-cccccc------------------------ccCCCHHHHHHHH-hcC--HHHHHHHHHHH
Confidence            54333 3346664311  0 000000                        0011111122111 111  22333333333


Q ss_pred             HHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHH
Q 045073          164 LLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSIC  243 (402)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~  243 (402)
                      ......+....+.+.+.+....+....+            .......+..+++.++.+++.||+|+|+.+..+..+..++
T Consensus       242 ~~~~~~~~~~~~~~y~~~y~~~~~~~~~------------~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~  309 (473)
T PRK10429        242 AYNIASNIINGFAIYYFTYVIGDADLFP------------YYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLS  309 (473)
T ss_pred             HHHHHHHHHhhheeeEEEEECCCHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence            3334444444455555554332322211            1444555677788889999999999999988777665554


Q ss_pred             HHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccc-------cchhhhhhhHH
Q 045073          244 MAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFP-------ARLRSTCHGIS  316 (402)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~r~~~~~~~  316 (402)
                      .+.+..... .. .              .+.+. ..+.....+..........+++.+|..+       .+..|...|..
T Consensus       310 ~~~~~~~~~-~~-~--------------~~~~~-~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~  372 (473)
T PRK10429        310 CGVLLLMGL-AA-P--------------HNALL-IVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQ  372 (473)
T ss_pred             HHHHHHHhc-cC-c--------------hhHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHH
Confidence            444332211 01 1              12222 2222222222233334566777888855       33345678888


Q ss_pred             HHHHHHhHHHHhHhHHhhhhcc
Q 045073          317 AAAGKAGAIVGAFGVQYYTQKG  338 (402)
Q Consensus       317 ~~~~~~g~~i~~~~~~~~~~~~  338 (402)
                      .....++..+++.+.+.+.+..
T Consensus       373 ~~~~K~~~al~~~i~g~~l~~~  394 (473)
T PRK10429        373 TMVVKGGSAFAAFFIGVVLGLI  394 (473)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHc
Confidence            9999999999999998887655

>PRK11663 regulatory protein UhpC; Provisional

Probab=99.56  E-value=1.2e-13  Score=129.42  Aligned_cols=176  Identities=11%  Similarity=0.086  Sum_probs=128.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHH
Q 045073          155 LLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQL  234 (402)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~  234 (402)
                      .....+.++......+....+.|.+.+++|++..+.+.            ......++..++.++.|++.||+|||+++.
T Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~------------~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~   92 (434)
T PRK11663         25 LITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGL------------LATLFYITYGVSKFVSGIVSDRSNARYFMG   92 (434)
T ss_pred             HHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHhhhhHHHhhcCCchhHH
Confidence            33444445554455556677889999999999887665            667778888889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhh
Q 045073          235 GGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHG  314 (402)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~  314 (402)
                      ++.++.+++.++....                     .+. ..+.+..+..+.......+....++.|.+|++.|+++.+
T Consensus        93 ~~~~~~~~~~~~~~~~---------------------~~~-~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~  150 (434)
T PRK11663         93 IGLIATGIINILFGFS---------------------SSL-WAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWA  150 (434)
T ss_pred             HHHHHHHHHHHHHHHH---------------------hHH-HHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHH
Confidence            9988888877766553                     222 222222222233233334566778899999999999999


Q ss_pred             HHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhh-eeeeecc
Q 045073          315 ISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLC-SFMVPET  366 (402)
Q Consensus       315 ~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~-~~~~~et  366 (402)
                      +.+....+|..+++.+.+.+.+..  +|++.|.+.+++.++..+. .++++|+
T Consensus       151 ~~~~~~~~g~~~~~~~~~~l~~~~--gw~~~f~~~~i~~~~~~~~~~~~~~~~  201 (434)
T PRK11663        151 IWNTAHNVGGALIPLVVGAIALHY--GWRYGMMIAGIIAIVVGLFLCWRLRDK  201 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcc--cHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            999999999999999999888876  8999998887766544333 3344554

>TIGR00891 2A0112 putative sialic acid transporter

Probab=99.56  E-value=9e-14  Score=129.23  Aligned_cols=183  Identities=17%  Similarity=0.163  Sum_probs=135.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchh
Q 045073          151 HGLHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRF  230 (402)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr  230 (402)
                      +++.+....+.++......+......|.+.+++|.+..+.+.            ......++..++.++.|+++||+|||
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~------------~~~~~~~~~~~~~~~~G~l~Dr~g~r   77 (405)
T TIGR00891        10 QWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAAS------------LISAALISRWFGALMFGLWGDRYGRR   77 (405)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHH------------HHHHHHHHHHHHHHHHHHHHHHhccH
Confidence            334566666667777777777777888888899999887665            66777888889999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhh
Q 045073          231 IIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRS  310 (402)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~  310 (402)
                      +.+..+.++.+++.++....                     .+ ...+.+..+..+.+.....+...+++.|.+|++.|+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~---------------------~~-~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~  135 (405)
T TIGR00891        78 LPMVTSIVLFSAGTLACGFA---------------------PG-YITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRN  135 (405)
T ss_pred             HHHHHHHHHHHHHHHHHHHh---------------------cc-HHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhh
Confidence            99998888777776665542                     12 223333334444434445556777889999999999


Q ss_pred             hhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeeccC
Q 045073          311 TCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETN  367 (402)
Q Consensus       311 ~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~  367 (402)
                      .+.++.+....+|.++++.+.+.+.+..+.+|+..|.+.++..++..+....+||++
T Consensus       136 ~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~  192 (405)
T TIGR00891       136 KASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALWLRKNIPEAE  192 (405)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence            999999999999999999988888776522488888876666655555444557754

>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]

Probab=99.56  E-value=1.4e-12  Score=118.61  Aligned_cols=254  Identities=14%  Similarity=0.057  Sum_probs=158.4

Q ss_pred             hhhhhccC-cccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHHH
Q 045073            7 VIMSEYAN-KRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAAL   85 (402)
Q Consensus         7 ~~i~e~~~-~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~~   85 (402)
                      ++..|+.+ ++||.+..+.-+.+..+|.++...+...+...++++                +...||+....+.++.+++
T Consensus       135 al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~----------------~~~~g~~~~~~~~~vi~~i  198 (467)
T COG2211         135 ALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGG----------------DKALGYQGTALVLGVIGVI  198 (467)
T ss_pred             hcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------cchhhHHHHHHHHHHHHHH
Confidence            45566664 689999999999999999999988888887666542                2367999998887777666


Q ss_pred             HHHHHhh-ccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHHHH
Q 045073           86 TYYWRMK-MPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFL  164 (402)
Q Consensus        86 ~~~~~~~-~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (402)
                      ..+.+++ .+|.+.-    ....++                        ..+....+.+..-..+|.   +...+...++
T Consensus       199 ~~l~~~~~v~ER~~~----~~~~~~------------------------~~~~~~~~~~~~~~~Nrp---~~~~l~~~l~  247 (467)
T COG2211         199 LLLFCFFNVKERVVE----TQPTKT------------------------GVKLKLKDSFLLIFKNRP---LLLLLLMNLL  247 (467)
T ss_pred             HHHHHHHHhhcccCc----cccCcc------------------------cccccHHHHHHHHHccch---HHHHHHHHHH
Confidence            5555444 6664321    000000                        000111111111122222   2222223333


Q ss_pred             HHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHH
Q 045073          165 LDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSIC  243 (402)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~  243 (402)
                      .............+|.+. +|.+......            .......+.+++.++..++++|+|+|+++.++.++..++
T Consensus       248 ~~~~~~i~~s~~~yy~~y~lg~~~l~~~~------------~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~  315 (467)
T COG2211         248 LFIAFNIRGSIMVYYVTYVLGDPELFAYL------------LLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVG  315 (467)
T ss_pred             HHHHHHHHhhhhheeEEEEcCChHHHHHH------------HHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHH
Confidence            333333333344444443 4444443222            455556666666889999999999999999998888877


Q ss_pred             HHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccc-------cchhhhhhhHH
Q 045073          244 MAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFP-------ARLRSTCHGIS  316 (402)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~r~~~~~~~  316 (402)
                      .+.+.+..                    .+...++++..+....+.....+..|++.+|...       .+.-|...|..
T Consensus       316 ~~~~~f~~--------------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~  375 (467)
T COG2211         316 YLLLYFTP--------------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGM  375 (467)
T ss_pred             HHHHHhhc--------------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHH
Confidence            77666642                    2233444444444445556667789999998853       34446778888


Q ss_pred             HHHHHHhHHHHhHhHHhhhhccC
Q 045073          317 AAAGKAGAIVGAFGVQYYTQKGD  339 (402)
Q Consensus       317 ~~~~~~g~~i~~~~~~~~~~~~~  339 (402)
                      .++..+|.+++..+.++.....+
T Consensus       376 tF~~K~g~ala~~~~g~~L~~~G  398 (467)
T COG2211         376 TFFRKLGLALAGFIPGWILGAIG  398 (467)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcC
Confidence            99999999999999998887664

>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter

Probab=99.56  E-value=1.6e-12  Score=120.66  Aligned_cols=330  Identities=12%  Similarity=-0.021  Sum_probs=193.8

Q ss_pred             chhhhhhccCcccc--hhHHHHHHHHHHHHHHHHHHHHHHHH--hhhhccccCcccccccccccCCCCCchhHHHHHHhH
Q 045073            5 SAVIMSEYANKRTR--GAFIAAVFAMQGMGILFAGVISLIFS--GIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGA   80 (402)
Q Consensus         5 ~~~~i~e~~~~~~R--g~~~~~~~~~~~lG~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~   80 (402)
                      ..++++|.+|+++|  +.+.++.+.+.++|.++++.+++...  ..++....+        .+  ...-.+-|..|++.+
T Consensus       135 ~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~--------~~--~~~~~~~~~~F~i~a  204 (477)
T TIGR01301       135 CRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTE--------AC--GVSCANLKSCFLIDI  204 (477)
T ss_pred             HHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccccccc--------cc--ccccchHHHHHHHHH
Confidence            46789999998865  68999999999999999999998752  111110000        00  001236799999977


Q ss_pred             HHHHHHHH-HHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHH
Q 045073           81 VPAALTYY-WRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTT  159 (402)
Q Consensus        81 i~~~~~~~-~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (402)
                      +..++..+ ..++++|.|-.  . +++.+++              +.++.++. +.+....+.+  ...++..+.+..++
T Consensus       205 ~~l~i~~l~t~~~v~E~~~~--~-~~~~~~~--------------~~~~~~~~-~~~~~~~~i~--~~~~~mP~~m~~l~  264 (477)
T TIGR01301       205 ILLAILTYIALSAVKENPLI--G-SDDFINS--------------EAAPPSKH-GEEAFFGELF--GAFKYLPRPVWILL  264 (477)
T ss_pred             HHHHHHHHHHeeeeeccCCC--c-cccchhh--------------hccccccc-chhhhHHHHH--HHHHHCCHHHHHHH
Confidence            77666544 45568987632  1 1110000              00000000 0001111111  12233334666677


Q ss_pred             HHHHHHHHHHHHHHhhhhhhhhh--cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccch-hHHHHHH
Q 045073          160 STWFLLDIAFYTINLAQKDIYPA--TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGR-FIIQLGG  236 (402)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~gr-r~~~~~~  236 (402)
                      ...++..++++.+..|...+..+  ++-++.+.  ..+++..+.+........+...+.+++..++.+|+|+ |.....+
T Consensus       265 ~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~--~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s  342 (477)
T TIGR01301       265 LVTCLNWIAWFPFILFDTDWMGREVYGGSVNQG--AKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIV  342 (477)
T ss_pred             HHHHHHHHHHHHHHHhccHHHHHHHcCCCCcch--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHH
Confidence            77777777777777787777653  33222211  2345555556666666667667777788899999985 6777888


Q ss_pred             HHHHHHHHHHHHHHhhcccCC-CCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccc--hhhhhh
Q 045073          237 FLLMSICMAILGARYDSLRGK-KCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPAR--LRSTCH  313 (402)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~--~r~~~~  313 (402)
                      .++.+++++...+......+. +.+..+....  .+........+.....+.......+++++++++..|++  ..|..+
T Consensus       343 ~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~m  420 (477)
T TIGR01301       343 NIILAICLAATVLVTYVAKNSRYYDGDGESLP--PPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSM  420 (477)
T ss_pred             HHHHHHHHHHHHHHHhhhhccccccccccccC--cchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchh
Confidence            777777777666543211000 0000000000  00111122222223333334455668899999999954  448899


Q ss_pred             hHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee-eccCC
Q 045073          314 GISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV-PETNG  368 (402)
Q Consensus       314 ~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~-~et~~  368 (402)
                      |+.|.+..+.+++..+..+.+.+..+.+....+.+.++..+++.+..+++ |+++.
T Consensus       421 gilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~~  476 (477)
T TIGR01301       421 GVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPRV  476 (477)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence            99999999999999988888776665455678888888888888877754 77653

This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.

>PRK10213 nepI ribonucleoside transporter; Reviewed

Probab=99.55  E-value=1.5e-13  Score=126.94  Aligned_cols=180  Identities=13%  Similarity=0.051  Sum_probs=131.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchh
Q 045073          151 HGLHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRF  230 (402)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr  230 (402)
                      .|+......+..+......|......|.+.+++|+++.+.+.            ......++..++.++.|.+.||+|||
T Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~------------~~~~~~~~~~~~~~~~g~l~Dr~grr   85 (394)
T PRK10213         18 NWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQ------------SVTVTAFVAMFASLFITQTIQATDRR   85 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHhcccCcH
Confidence            444444455444444445556666678888999999887665            56667778888899999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhh
Q 045073          231 IIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRS  310 (402)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~  310 (402)
                      +.+..+.++.+++.++....                     .+. ....+.....+.......+...+++.|.+|++.|+
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~---------------------~~~-~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~  143 (394)
T PRK10213         86 YVVILFAVLLTLSCLLVSFA---------------------NSF-SLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVP  143 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHH---------------------ChH-HHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHH
Confidence            99999998888877665542                     222 33333333334333344566777889999999999


Q ss_pred             hhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeecc
Q 045073          311 TCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPET  366 (402)
Q Consensus       311 ~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et  366 (402)
                      .+.++......++..++|.+.+.+.+..  +|+..|++.+++.++..+... ..||+
T Consensus       144 ~a~~~~~~~~~~g~~ig~~l~~~l~~~~--gw~~~f~~~~~l~~~~~l~~~~~~p~~  198 (394)
T PRK10213        144 KALSVIFGAVSIALVIAAPLGSFLGELI--GWRNVFNAAAVMGVLCIFWIIKSLPSL  198 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhc--CHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence            9999999999999999999999998877  899999888777666554433 24654

>PRK03545 putative arabinose transporter; Provisional

Probab=99.54  E-value=1.4e-13  Score=127.36  Aligned_cols=176  Identities=12%  Similarity=0.100  Sum_probs=126.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHH
Q 045073          155 LLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQL  234 (402)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~  234 (402)
                      .+.+.+..+......+......|.+.+++|.+..+.+.            ......++..++.+..|.+.||+|||+++.
T Consensus        11 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~------------~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~   78 (390)
T PRK03545         11 VVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGL------------MLTIYAWVVALMSLPLMLLTSNVERRKLLI   78 (390)
T ss_pred             HHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHcCCChHHHHH
Confidence            34434433433344444555678888999999887665            556666777777888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhh
Q 045073          235 GGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHG  314 (402)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~  314 (402)
                      .+..+.+++.+.....                     .+. ..+.+.....+.......+...++..|.+|++.|+++.|
T Consensus        79 ~~~~~~~~~~~~~~~~---------------------~~~-~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g  136 (390)
T PRK03545         79 GLFVLFIASHVLSALA---------------------WNF-TVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALS  136 (390)
T ss_pred             HHHHHHHHHHHHHHHh---------------------ccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHH
Confidence            9988888877666553                     222 233333333333333334556678899999999999999


Q ss_pred             HHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeecc
Q 045073          315 ISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPET  366 (402)
Q Consensus       315 ~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et  366 (402)
                      +......+|..++|.+.+.+.+..  +|++.|++.+++.++..+..+ .+||.
T Consensus       137 ~~~~~~~~g~~ig~~l~~~l~~~~--gw~~~f~~~~~~~~l~~~~~~~~~~~~  187 (390)
T PRK03545        137 LLATGTALAMVLGLPLGRVIGQYL--GWRTTFLAIGGGALITLLLLIKLLPLL  187 (390)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            999999999999999999888777  899999998888776655544 34553

>PF13347 MFS_2: MFS/sugar transport protein

Probab=99.53  E-value=1.3e-12  Score=122.40  Aligned_cols=250  Identities=14%  Similarity=0.096  Sum_probs=155.3

Q ss_pred             hhhhhhccC-cccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCC-chhHHHHHHhHHHH
Q 045073            6 AVIMSEYAN-KRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGD-YLWRIVLMFGAVPA   83 (402)
Q Consensus         6 ~~~i~e~~~-~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Wr~~f~~~~i~~   83 (402)
                      .++..|.++ +++|.+..+.-..+..+|.++...+...+...++..                 +. .+|++...+.++..
T Consensus       125 ~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~-----------------~~~~~~~~~~~v~~iv~  187 (428)
T PF13347_consen  125 NALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGG-----------------DTSNGYRWMALVLAIVG  187 (428)
T ss_pred             hhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccC-----------------ccchHHHHHHHHHHHHH
Confidence            467889997 578999999999999999987777777766443321                 22 38999999877666


Q ss_pred             HHHHHH-HhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073           84 ALTYYW-RMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW  162 (402)
Q Consensus        84 ~~~~~~-~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (402)
                      ++..+. .+..+|.++.     . +++                        +++.+.++.++.....|..+.++.   ..
T Consensus       188 ~v~~~i~~~~~ke~~~~-----~-~~~------------------------~~~~~~~~~~~~~~~nr~~~~l~~---~~  234 (428)
T PF13347_consen  188 LVFFLITFFFVKERSVE-----V-TEQ------------------------EKKISLRDSLRSLFRNRPFRILLL---AF  234 (428)
T ss_pred             HHHhhhhhheeeecccc-----c-ccc------------------------ccccccccchhhhcccchHHHHHH---HH
Confidence            665444 4456772110     0 000                        111122222222222232222222   22


Q ss_pred             HHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHH
Q 045073          163 FLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMS  241 (402)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~  241 (402)
                      +.............+.+.++ .|.+ ...+            .......+..+++.++.++++||+|+|+.+..+..+.+
T Consensus       235 ~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~------------~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~  301 (428)
T PF13347_consen  235 FLQWLAFALMNTFLPYYFTYVLGNE-GLIS------------IFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAA  301 (428)
T ss_pred             HHHHhhhhhhhhHHHHHHHHHhcCc-hhhH------------HHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHH
Confidence            22223333333344445544 3333 2111            15556777888888999999999999999999998888


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccccccccccc-------chhhhhhh
Q 045073          242 ICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPA-------RLRSTCHG  314 (402)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-------~~r~~~~~  314 (402)
                      ++.+++.+...                    +......+.....+.+........+++.+|..+.       +..|...|
T Consensus       302 ~~~~~~~~~~~--------------------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s  361 (428)
T PF13347_consen  302 LGFLLLFFLGP--------------------GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFS  361 (428)
T ss_pred             HHHHHHHHHHh--------------------hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHH
Confidence            87777666421                    1223344444444444455557788888998763       34588899


Q ss_pred             HHHHHHHHhHHHHhHhHHhhhhcc
Q 045073          315 ISAAAGKAGAIVGAFGVQYYTQKG  338 (402)
Q Consensus       315 ~~~~~~~~g~~i~~~~~~~~~~~~  338 (402)
                      +.++...++..+++.+.+.+.+..
T Consensus       362 ~~~~~~k~~~~la~~i~g~~l~~~  385 (428)
T PF13347_consen  362 VNSFFIKIGQGLAGAIVGLLLALV  385 (428)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHHh
Confidence            999999999999999888877654

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily

Probab=99.53  E-value=1.6e-13  Score=126.76  Aligned_cols=177  Identities=16%  Similarity=0.082  Sum_probs=128.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHH
Q 045073          156 LGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLG  235 (402)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~  235 (402)
                      +...+..+.............|.+.+++|.++.+.+.            ......++..++.++.|++.||+|||+.+..
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~------------~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~   75 (385)
T TIGR00710         8 LLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQM------------TLTLYLLGFAAGQLLWGPLSDRYGRRPVLLL   75 (385)
T ss_pred             HHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHhhhhHHHhcCChHHHHH
Confidence            3333333444444455555678888889998887665            6777788888999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhH
Q 045073          236 GFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGI  315 (402)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~  315 (402)
                      +..+.+++.+.....                     .+. ....+..+..+.......+...+++.|.+|++.|+++.++
T Consensus        76 ~~~~~~~~~~~~~~~---------------------~~~-~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (385)
T TIGR00710        76 GLFIFALSSLGLALS---------------------NNI-ETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSI  133 (385)
T ss_pred             HHHHHHHHHHHHHHH---------------------ccH-HHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence            888777777665553                     222 2233333333333333445667788999999999999999


Q ss_pred             HHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeeccCC
Q 045073          316 SAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPETNG  368 (402)
Q Consensus       316 ~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~~  368 (402)
                      .+....+|..+++.+.+.+.+..  +|+..+++.+++.++..+..+ +.||++.
T Consensus       134 ~~~~~~~g~~~g~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (385)
T TIGR00710       134 LMPVLALAPAVAPLLGGYILVWL--SWHAIFAFLSLAGILLSALIFFILPETLP  185 (385)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHc--CHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence            99999999999999999888876  899888888877776655554 3466543

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.

>TIGR00893 2A0114 d-galactonate transporter

Probab=99.53  E-value=1.2e-13  Score=127.92  Aligned_cols=164  Identities=16%  Similarity=0.137  Sum_probs=124.4

Q ss_pred             HHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHH
Q 045073          169 FYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILG  248 (402)
Q Consensus       169 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~  248 (402)
                      .+......|.+.+++|.++.+.+.            ......++..++.++.|+++||+|||+.+..+.++.+++..+..
T Consensus        10 ~~~~~~~~~~~~~~~g~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~   77 (399)
T TIGR00893        10 RANLSFAAPMLQEDLGLSAAQYGY------------VFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQA   77 (399)
T ss_pred             HHhhhHhHHHHHHhhCCChhhHHH------------HHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHH
Confidence            344455567777889998887665            77778888899999999999999999999988887777776665


Q ss_pred             HHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHh
Q 045073          249 ARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGA  328 (402)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~  328 (402)
                      ..                     .+ ...+.+.....+.+.....+....++.|.+|++.|+++.++......+|..+++
T Consensus        78 ~~---------------------~~-~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~  135 (399)
T TIGR00893        78 FA---------------------GA-YVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGG  135 (399)
T ss_pred             HH---------------------cC-HHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHH
Confidence            53                     22 233333333444444455567778899999999999999999999999999999


Q ss_pred             HhHHhhhhccCCcchhhHHHHHHHHHHHhhheee-eeccCC
Q 045073          329 FGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFM-VPETNG  368 (402)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~-~~et~~  368 (402)
                      .+.+.+.+..  +|+..|.+.+++.++..++.++ .||++.
T Consensus       136 ~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (399)
T TIGR00893       136 PLVGWILIHF--SWQWAFIIEGVLGIIWGVLWLKFIPDPPQ  174 (399)
T ss_pred             HHHHHHHHhC--CchHHHHHHHHHHHHHHHHhhheecCCCC
Confidence            9999887776  8999999888877766655543 455443

>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]

Probab=99.53  E-value=3.1e-13  Score=120.42  Aligned_cols=176  Identities=16%  Similarity=0.128  Sum_probs=153.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHH
Q 045073          153 LHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFII  232 (402)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~  232 (402)
                      ...+.+.+..|.....-+...-.+|.+.+++|.+...++.            ..+.+..+..++.++...+.||+.||++
T Consensus        13 ~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~------------lis~yAl~~ai~ap~l~~lt~r~~Rr~l   80 (394)
T COG2814          13 LALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQ------------LITAYALGVALGAPLLALLTGRLERRRL   80 (394)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHcccchHHH
Confidence            4677777888888888888999999999999999998777            8888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhh
Q 045073          233 QLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTC  312 (402)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~  312 (402)
                      ++..+.++.++.++.++.                      .++....+..+..+......+++..++..++.|+++|+++
T Consensus        81 Ll~~l~lFi~~n~l~alA----------------------p~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~A  138 (394)
T COG2814          81 LLGLLALFIVSNLLSALA----------------------PSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRA  138 (394)
T ss_pred             HHHHHHHHHHHHHHHHHh----------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhH
Confidence            999999999999888873                      4445666666666666666777888899999999999999


Q ss_pred             hhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheee-ee
Q 045073          313 HGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFM-VP  364 (402)
Q Consensus       313 ~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~-~~  364 (402)
                      .++.+....+...+|..+..++-+..  |||.+|++.+++.++..+..+. +|
T Consensus       139 iaiv~~G~tlA~v~GvPLGt~ig~~~--GWR~~F~~ia~l~ll~~~~~~~~lP  189 (394)
T COG2814         139 LALVFTGLTLATVLGVPLGTFLGQLF--GWRATFLAIAVLALLALLLLWKLLP  189 (394)
T ss_pred             HHHHHHHHHHHHHHhccHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999999999999999999999998  9999999999999988887774 48

>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

Probab=99.53  E-value=2.2e-13  Score=126.81  Aligned_cols=182  Identities=15%  Similarity=0.094  Sum_probs=132.4

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccch
Q 045073          150 KHGLHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGR  229 (402)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~gr  229 (402)
                      +++..+...++..+......+......|.+.+++|.++.+.+.            ......++.+++.++.|+++||+||
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~------------~~~~~~~~~~~~~~~~g~l~dr~g~   79 (406)
T PRK11551         12 RLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGW------------AFSAGILGLLPGALLGGRLADRIGR   79 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            3334555565666666666777777889999999999887665            7777888889999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchh
Q 045073          230 FIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLR  309 (402)
Q Consensus       230 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r  309 (402)
                      |+++..+.++..++.++....                     .+. ..+.+.....+.+.....+...+++.|.+|++.|
T Consensus        80 r~~~~~~~~~~~~~~~~~~~~---------------------~~~-~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r  137 (406)
T PRK11551         80 KRILIVSVALFGLFSLATAQA---------------------WDF-PSLLVARLLTGVGLGGALPNLIALTSEAVGPRLR  137 (406)
T ss_pred             chhHHHHHHHHHHHHHHHHHh---------------------ccH-HHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHH
Confidence            999999887776666554442                     222 2333333333333334445667788999999999


Q ss_pred             hhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeeccC
Q 045073          310 STCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPETN  367 (402)
Q Consensus       310 ~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~  367 (402)
                      +++.++.+....+|..+++.+.+.+.+..  +|+..|++.+++.++..++.. ++||++
T Consensus       138 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~  194 (406)
T PRK11551        138 GTAVSLMYCGVPFGGALASVIGVLAAGDA--AWRHIFYVGGVGPLLLVPLLMRWLPESR  194 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHcccc--CHHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence            99999999999999999998877776655  788888887766655554433 457754

>PRK09669 putative symporter YagG; Provisional

Probab=99.53  E-value=1.5e-12  Score=122.58  Aligned_cols=250  Identities=14%  Similarity=0.100  Sum_probs=136.2

Q ss_pred             hhhhhhcc-CcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHH
Q 045073            6 AVIMSEYA-NKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAA   84 (402)
Q Consensus         6 ~~~i~e~~-~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~   84 (402)
                      .++.+|+. ++++|.+..+....+..+|..+++.+...+...++.                .....+|+..+.+.++.++
T Consensus       131 ~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~----------------~~~~~g~~~~~~i~~ii~~  194 (444)
T PRK09669        131 CAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGK----------------GDEQKGYFYAMMVMGLLGV  194 (444)
T ss_pred             HHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----------------CchhhhHHHHHHHHHHHHH
Confidence            35778887 568899999999888899988888777666543321                1134689998888666655


Q ss_pred             HHHHH-HhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHHH
Q 045073           85 LTYYW-RMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWF  163 (402)
Q Consensus        85 ~~~~~-~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (402)
                      +..+. .+..+|.++.    +++                            ++.+.++.++...+++.++.++..   .+
T Consensus       195 v~~~~~~~~~~e~~~~----~~~----------------------------~~~~~~~~~~~~~~n~~~~~l~~~---~~  239 (444)
T PRK09669        195 VLFFCCFFMTKERYTP----EVD----------------------------NSSSVWKDLKLLLGNSQWRIMFIF---NV  239 (444)
T ss_pred             HHHHHHhCCeEEecCC----CCc----------------------------CCCCHHHHHHHHhCCchHHHHHHH---HH
Confidence            54443 3334443110    000                            000011111222222222222222   22


Q ss_pred             HHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHH
Q 045073          164 LLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSIC  243 (402)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~  243 (402)
                      .............+.+.+.. +...+.           .........+..+++.++.++++||+|+|+.+..+..+.++.
T Consensus       240 ~~~~~~~~~~~~~~y~~~~~-~~~~~~-----------~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~  307 (444)
T PRK09669        240 VLLTAVVTRGGATLYYVNYV-LLRPDL-----------ATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVIL  307 (444)
T ss_pred             HHHHHHHHHhhhhheeeeee-cCCHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence            21112211122223333322 221111           111334455667778888999999999999988776554443


Q ss_pred             HHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccc-------cchhhhhhhHH
Q 045073          244 MAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFP-------ARLRSTCHGIS  316 (402)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~r~~~~~~~  316 (402)
                      ...+...    .                .+......+..+..+.+.....+..+++.+|..+       .+..|...|+.
T Consensus       308 ~~~~~~~----~----------------~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~  367 (444)
T PRK09669        308 SALIFFI----P----------------PSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTN  367 (444)
T ss_pred             HHHHHHh----C----------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHH
Confidence            3222221    0                1112222222233333344455678888888875       23346677888


Q ss_pred             HHHHHHhHHHHhHhHHhhhhcc
Q 045073          317 AAAGKAGAIVGAFGVQYYTQKG  338 (402)
Q Consensus       317 ~~~~~~g~~i~~~~~~~~~~~~  338 (402)
                      +.+..+|..+++.+.+.+.+..
T Consensus       368 ~~~~klg~alg~~i~g~ll~~~  389 (444)
T PRK09669        368 LFAIKLGLAIGGAVVGWILAWV  389 (444)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHc
Confidence            8899999999999999888765

>PRK14995 methyl viologen resistance protein SmvA; Provisional

Probab=99.51  E-value=5e-13  Score=127.33  Aligned_cols=179  Identities=15%  Similarity=0.064  Sum_probs=130.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHH
Q 045073          153 LHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFII  232 (402)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~  232 (402)
                      ..+..+++..+.............|.+.+++|.+..+.++            ....+.++...+.+..|+++||+|||+.
T Consensus         6 ~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~------------~~~~~~l~~~~~~~~~G~l~D~~Grk~~   73 (495)
T PRK14995          6 LTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLW------------IIDIYSLVMAGMVLPMGALGDRIGFKRL   73 (495)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHH------------HHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence            3455666666666666667777789999999988876555            5555666666777889999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccccccccc-ccchhhh
Q 045073          233 QLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELF-PARLRST  311 (402)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~  311 (402)
                      ++.+..+..++.++.+..                     . +...+++.....+.+..+..+.....+.+.+ |++.|++
T Consensus        74 l~~~~~~~~~~~~~~~~a---------------------~-~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~  131 (495)
T PRK14995         74 LMLGGTLFGLASLAAAFS---------------------P-TASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNM  131 (495)
T ss_pred             HHHHHHHHHHHHHHHHHc---------------------C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence            999998888887776653                     2 2233333333334333334444444455554 7899999


Q ss_pred             hhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeeccC
Q 045073          312 CHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPETN  367 (402)
Q Consensus       312 ~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~  367 (402)
                      +.|+......+|..+||.+.+.+.+..  +|++.|++...+.++..++.+ ++|+.+
T Consensus       132 ~~g~~~~~~~~g~~~gp~lgg~l~~~~--gwr~~f~i~~~~~~~~~~l~~~~l~~~~  186 (495)
T PRK14995        132 ALGVWAAVGSGGAAFGPLVGGILLEHF--YWGSVFLINVPIVLVVMGLTARYVPRQA  186 (495)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccC--ChHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence            999999999999999999999999887  899999988877776665554 346643

>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins

Probab=99.51  E-value=2e-12  Score=121.87  Aligned_cols=187  Identities=11%  Similarity=0.101  Sum_probs=108.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhH
Q 045073          153 LHLLGTTSTWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFI  231 (402)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~  231 (402)
                      |.+....+..+...+.+|....+.|..... ++.+.....         ..........++...|.++.|.+..+++|-|
T Consensus       310 r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~---------~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~K  380 (599)
T PF06609_consen  310 RGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISIT---------EIGWISSPVGFGSCAGAVILGLLFSKIRHIK  380 (599)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccc---------eeehhhhhHHHHHHHHHHHHHHHHHHccchh
Confidence            345555556666666777777777766544 333221100         1112555667777788888888988887644


Q ss_pred             -HHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhh
Q 045073          232 -IQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRS  310 (402)
Q Consensus       232 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~  310 (402)
                       .++++..++.+++.+++...  ..+.              ...+.+..    +.+++..+......+.+.-..|++.-+
T Consensus       381 w~li~~~~~~ta~~Gama~~~--~~n~--------------~~~i~~~~----l~g~giG~~~~~~~~~~ql~~p~~~ig  440 (599)
T PF06609_consen  381 WQLIFGSVLMTAFCGAMAAVR--PDNK--------------NAAIAFLV----LAGFGIGGILVPAIVIAQLIVPDEDIG  440 (599)
T ss_pred             HHHHHHHHHHHHHHHHHHHcc--CCCc--------------chHHHHHH----HHHHhHHHHHHHHHHeeEeeeCchHHH
Confidence             44556555544433333321  1111              11122222    222212222223444556678999999


Q ss_pred             hhhhHHHHHHHHhHHHHhHhHHhhhhc-----------------------------------------c-----------
Q 045073          311 TCHGISAAAGKAGAIVGAFGVQYYTQK-----------------------------------------G-----------  338 (402)
Q Consensus       311 ~~~~~~~~~~~~g~~i~~~~~~~~~~~-----------------------------------------~-----------  338 (402)
                      ++.|+...+..+|+.++..++..+...                                         .           
T Consensus       441 ~a~gL~~s~R~~GGsIg~aIy~~I~~n~~~~~l~~~v~~a~~~aglp~~sl~~li~a~~~~~~~a~~~iPGit~~i~~a~  520 (599)
T PF06609_consen  441 TATGLTGSIRSIGGSIGYAIYNAIFTNKLPKELPKYVAPAALAAGLPESSLPALIEALAAGNLEALAAIPGITPEIIAAV  520 (599)
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHHHhhhhHhHHHHHHHHHHhcCCChhhHHHHHHHHhccChhHHhhCCCCCHHHHHHH
Confidence            999999999999999888655433210                                         0           


Q ss_pred             --------CCcchhhHHHHHHHHHHHhhheeeeeccCC
Q 045073          339 --------DKQIKQSIITLAVVNFLGFLCSFMVPETNG  368 (402)
Q Consensus       339 --------~~~~~~~~~~~~~~~~i~~i~~~~~~et~~  368 (402)
                              ..+++++++....+..++.+..+++++.++
T Consensus       521 ~~A~~~aYa~ay~~V~~~siaFG~vaiiaa~fl~d~~~  558 (599)
T PF06609_consen  521 VAAFQEAYAHAYRYVYYSSIAFGVVAIIAALFLGDIDK  558 (599)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChHH
Confidence                    005678888888888888888888876543

Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].

>PLN00028 nitrate transmembrane transporter; Provisional

Probab=99.50  E-value=9.1e-13  Score=124.75  Aligned_cols=177  Identities=8%  Similarity=-0.023  Sum_probs=119.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHH
Q 045073          153 LHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFII  232 (402)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~  232 (402)
                      +.+.......+......+....+.|.+.+++|++..+.+.            ......++..++.++.|+++||+|||++
T Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~------------~~~~~~~~~~~~~~~~G~l~dr~G~r~~  103 (476)
T PLN00028         36 RAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGN------------AGIASVSGSIFSRLAMGPVCDLYGPRYG  103 (476)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCChHH
Confidence            3444444455555555666777788888899998877554            5566677788888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhh
Q 045073          233 QLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTC  312 (402)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~  312 (402)
                      +..+.++.+++.++.+..                     .+. ..+.+..+..+++..+.. ....+++|.+|++.|+++
T Consensus       104 ~~~~~~~~~~~~~~~~~~---------------------~s~-~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a  160 (476)
T PLN00028        104 SAFLLMLTAPAVFCMSLV---------------------SSA-TGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTA  160 (476)
T ss_pred             HHHHHHHHHHHHHHHHHh---------------------cCH-HHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHH
Confidence            988887777766655543                     222 222222223232222222 234567899999999999


Q ss_pred             hhHHHHHHHHhHHHHhHhHHhhhhc---c----CCcchhhHHHHHHHHHHHhhheeeee
Q 045073          313 HGISAAAGKAGAIVGAFGVQYYTQK---G----DKQIKQSIITLAVVNFLGFLCSFMVP  364 (402)
Q Consensus       313 ~~~~~~~~~~g~~i~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~i~~i~~~~~~  364 (402)
                      .|+.+....+|..+++.+.+.+...   .    ..+|++.|++.+++.++..++.++++
T Consensus       161 ~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~  219 (476)
T PLN00028        161 NGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLG  219 (476)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence            9999888888888877666544321   0    01799999998888776665555443

>PRK12307 putative sialic acid transporter; Provisional

Probab=99.50  E-value=4.2e-13  Score=125.71  Aligned_cols=164  Identities=14%  Similarity=0.142  Sum_probs=123.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073          154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ  233 (402)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~  233 (402)
                      .+....+.++......+......|.+.+++|.++.+.+.            ......++..++.++.|+++||+|||+++
T Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~------------~~~~~~~~~~l~~~~~g~l~dr~g~r~~l   86 (426)
T PRK12307         19 ALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAF------------LATAAFIGRPFGGALFGLLADKFGRKPLM   86 (426)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCChHHH
Confidence            455555556665666666677778888889999877655            66677888889999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073          234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH  313 (402)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~  313 (402)
                      ..+.++.+++.++..+.                      .....+.+.....+.+..+..+....++.|.+|++.|+++.
T Consensus        87 ~~~~~~~~~~~~~~~~~----------------------~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~  144 (426)
T PRK12307         87 MWSIVAYSVGTGLSGLA----------------------SGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKAS  144 (426)
T ss_pred             HHHHHHHHHHHHHHHHH----------------------hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhh
Confidence            99998888887766653                      12233333344444434445556777889999999999999


Q ss_pred             hHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHH
Q 045073          314 GISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVN  353 (402)
Q Consensus       314 ~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  353 (402)
                      ++......+|.++++.+.+.+.+..  +|+..|++.+...
T Consensus       145 ~~~~~~~~lg~~~~~~l~~~l~~~~--~w~~~f~i~~~~~  182 (426)
T PRK12307        145 AFLVSGFGIGNIIAAYFMPSFAEAY--GWRAAFFVGLLPV  182 (426)
T ss_pred             hHHHHHHhHHHHHHHHHHHHHcccC--CHHHHHHHHHHHH
Confidence            9999999999999998888877766  8998888754433

>PRK15462 dipeptide/tripeptide permease D; Provisional

Probab=99.50  E-value=9.2e-13  Score=122.80  Aligned_cols=174  Identities=17%  Similarity=0.127  Sum_probs=124.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhcc-chh
Q 045073          153 LHLLGTTSTWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRI-GRF  230 (402)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-grr  230 (402)
                      +.++..++........+|+...++|.++.+ +|++..+++.            ..........++.+++|+++||+ |||
T Consensus         9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~------------i~~~~~~~~~l~~ligG~LaDRilGrr   76 (493)
T PRK15462          9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYE------------LFSAYCSLVYVTPILGGFLADKVLGNR   76 (493)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHccCcH
Confidence            456666666677778899999999999864 7888876554            55666677777888999999999 999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccc--h
Q 045073          231 IIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPAR--L  308 (402)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~--~  308 (402)
                      +.+.++.++.+++.+++....                    ...........+. ..+.....+...++.+|.+|++  .
T Consensus        77 r~iliG~il~~lg~lll~~~~--------------------~~~~~~~l~l~li-~iG~G~~~~~~~alv~elfp~~~~~  135 (493)
T PRK15462         77 MAVMLGALLMAIGHVVLGASE--------------------IHPSFLYLSLAII-VCGYGLFKSNVSCLLGELYEPTDPR  135 (493)
T ss_pred             HHHHHHHHHHHHHHHHHHHhh--------------------cchhHHHHHHHHH-HHhcccccccHHHHHHHHCCCCCcc
Confidence            999999888877766554310                    0111111111111 1112223345567889999986  7


Q ss_pred             hhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee
Q 045073          309 RSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF  361 (402)
Q Consensus       309 r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~  361 (402)
                      |+++.++.+...++|+.++|.+.+++.+..  +|+..|.+.++..+++.+..+
T Consensus       136 R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~--Gw~~~F~iaaigm~l~li~~~  186 (493)
T PRK15462        136 RDGGFSLMYAAGNVGSIIAPIACGYAQEEY--SWAMGFGLAAVGMIAGLVIFL  186 (493)
T ss_pred             ccceehHHHHHHHHHHHHHHHHHHHHHhhh--ChHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999998877  899999887665555554443

>TIGR00887 2A0109 phosphate:H+ symporter

Probab=99.50  E-value=8.9e-13  Score=125.94  Aligned_cols=148  Identities=20%  Similarity=0.142  Sum_probs=108.5

Q ss_pred             HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073          205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT  284 (402)
Q Consensus       205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (402)
                      ......++.+++.++.|++.||+|||+.+..+.++..++.++.......  ..              ......+++..+.
T Consensus        61 ~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~--~~--------------~~~~~~~~~~r~l  124 (502)
T TIGR00887        61 VNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGS--SP--------------KSVMATLCFWRFW  124 (502)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCc--cc--------------chHHHHHHHHHHH
Confidence            6777888899999999999999999999998888777776655543110  00              1112334444445


Q ss_pred             HHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhc---------------------cCCcch
Q 045073          285 LFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQK---------------------GDKQIK  343 (402)
Q Consensus       285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~---------------------~~~~~~  343 (402)
                      .+++..+..+....+.+|.+|++.|+++.++......+|..+++.+...+...                     ...+|+
T Consensus       125 ~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR  204 (502)
T TIGR00887       125 LGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWR  204 (502)
T ss_pred             HHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHH
Confidence            55555556677889999999999999999999999999998888776554321                     011699


Q ss_pred             hhHHHHHHHHHHHhhheeeeeccCC
Q 045073          344 QSIITLAVVNFLGFLCSFMVPETNG  368 (402)
Q Consensus       344 ~~~~~~~~~~~i~~i~~~~~~et~~  368 (402)
                      ..+.+.++..++.+++.+++||+.+
T Consensus       205 ~~~~~~~ip~~i~~~~~~~lpESpr  229 (502)
T TIGR00887       205 ILIGFGAVPALLALYFRLTIPETPR  229 (502)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCHH
Confidence            9998887777777777777899854

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

>TIGR00881 2A0104 phosphoglycerate transporter family protein

Probab=99.50  E-value=2.1e-13  Score=125.55  Aligned_cols=167  Identities=11%  Similarity=0.035  Sum_probs=122.2

Q ss_pred             HHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHH
Q 045073          165 LDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICM  244 (402)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~  244 (402)
                      ............|.+.+++|.+..+.+.            ......++..++.++.|+++||+|||+.+..+.++.+++.
T Consensus         7 ~~~~~~~~~~~~~~~~~~~g~s~~~~g~------------~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~   74 (379)
T TIGR00881         7 YYLVRKNFALAMPYLVEEIGLSKTDLGL------------LLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVN   74 (379)
T ss_pred             HHHhHHhhhhhhHHHHHHhCCCHhHHHH------------HHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHH
Confidence            3344455566678888888999887665            7777888888999999999999999999999988888777


Q ss_pred             HHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhH
Q 045073          245 AILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGA  324 (402)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~  324 (402)
                      ++....                     .+ .....+.....+.+.....+...+++.|.+|++.|+++.++.+....+|.
T Consensus        75 ~~~~~~---------------------~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~  132 (379)
T TIGR00881        75 LFFGFS---------------------TS-LWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGG  132 (379)
T ss_pred             HHHHHh---------------------hh-HHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHH
Confidence            766653                     22 23333333343444444556778889999999999999999999999999


Q ss_pred             HHHh-HhHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeeccC
Q 045073          325 IVGA-FGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPETN  367 (402)
Q Consensus       325 ~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~  367 (402)
                      .+++ .+...+.+..  +|+..|++.+++.++..++.+ +.||++
T Consensus       133 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (379)
T TIGR00881       133 GLLPPLVLFGIAELY--SWHWVFIVPGIIAIIVSLICFLLLRDSP  175 (379)
T ss_pred             HHHHHHHHHHHHhcC--CchhHHHHHHHHHHHHHHHHheeeCCCc
Confidence            9999 4555555554  888888888777665544444 445543

>PRK10054 putative transporter; Provisional

Probab=99.49  E-value=6.3e-13  Score=122.91  Aligned_cols=176  Identities=10%  Similarity=-0.031  Sum_probs=124.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073          155 LLGTTSTWFLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ  233 (402)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~  233 (402)
                      ++.+....++...+.+....++|.+++ ++|++..+.+.            ......+..+++.++.|+++||+|||+++
T Consensus         9 ~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~------------~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~   76 (395)
T PRK10054          9 TSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGY------------AMTIALTIGVVFSLGFGILADKFDKKRYM   76 (395)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHhhcCcchhH
Confidence            344444555556667777777777774 58999887665            66666777888889999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073          234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH  313 (402)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~  313 (402)
                      ..+.++.+++.+.+.+.                     ++.+..+.... ..+.......+...++..|..|++.|+++.
T Consensus        77 ~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (395)
T PRK10054         77 LLAITAFASGFIAIPLV---------------------NNVTLVVLFFA-LINCAYSVFSTVLKAWFADNLSSTSKTKIF  134 (395)
T ss_pred             HHHHHHHHHHHHHHHHH---------------------hHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCHhHHHHHH
Confidence            88887777766655543                     22222222222 222222233455677789999999999999


Q ss_pred             hHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeeccC
Q 045073          314 GISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPETN  367 (402)
Q Consensus       314 ~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~  367 (402)
                      |+.+....+|.+++|.+.+.+.. .  +|+.+|.+.+++.++..++.. ++||.+
T Consensus       135 g~~~~~~~lg~~igp~l~~~l~~-~--g~~~~f~~~~~~~~i~~i~~~~~~~~~~  186 (395)
T PRK10054        135 SLNYTMLNIGWTVGPPLGTLLVM-Q--SINLPFWLAAICSAFPLVFIQIWVQRSE  186 (395)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-h--ccCcHHHHHHHHHHHHHHHHHHHHhccc
Confidence            99999999999999999998775 3  888899888877777655444 345543

>PRK03699 putative transporter; Provisional

Probab=99.49  E-value=2e-12  Score=119.75  Aligned_cols=174  Identities=10%  Similarity=0.005  Sum_probs=124.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHH
Q 045073          153 LHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFII  232 (402)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~  232 (402)
                      +..+..++.++.............|.+.+++|++..+.+.            ......++..++.++.|++.||+|||+.
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~------------~~s~~~~~~~i~~~~~g~l~dr~g~r~~   74 (394)
T PRK03699          7 KLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSN------------TFTFLNAGILISIFLNAWLMEIIPLKRQ   74 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence            3455555556665555667777789999999999887655            6667778888999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhh
Q 045073          233 QLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTC  312 (402)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~  312 (402)
                      +..+..+.+++.++....                     .+. ....+.....+.......+....++.|.+|++.|+.+
T Consensus        75 ~~~~~~~~~i~~~l~~~~---------------------~~~-~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~  132 (394)
T PRK03699         75 LIFGFALMILAVAGLMFS---------------------HSL-ALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSR  132 (394)
T ss_pred             HHHHHHHHHHHHHHHHHc---------------------chH-HHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHH
Confidence            998887777776665542                     122 2223232333332333344566778999999999999


Q ss_pred             hhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee
Q 045073          313 HGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF  361 (402)
Q Consensus       313 ~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~  361 (402)
                      .++.+....+++.++|.+.+.+..... +|+..|.+.+++.++..++.+
T Consensus       133 ~~~~~~~~~~g~~~~~~~~~~l~~~~~-gw~~~f~~~~~~~~~~~~~~~  180 (394)
T PRK03699        133 LLFTDSFFSMAGMIFPIIAAYLLARSI-EWYWVYACIGLVYVAIFILTL  180 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHHHHHHHH
Confidence            999888888888999988877654321 899999888877766554443

>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily

Probab=99.49  E-value=3e-13  Score=128.93  Aligned_cols=177  Identities=12%  Similarity=0.118  Sum_probs=132.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHH
Q 045073          155 LLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQL  234 (402)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~  234 (402)
                      +..+.+..+.............|.+.+++|.+..+.+.            ......++.+++.++.|+++||+|||+.+.
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~   71 (485)
T TIGR00711         4 TIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQW------------VITSYMLANAISIPLTGWLAKRFGTRRLFL   71 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhH------------HHHHHHHHHHHHHHhHHHHHHHhCcHHHHH
Confidence            34444455555555566667789999999998876655            667778888899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhh
Q 045073          235 GGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHG  314 (402)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~  314 (402)
                      .+.++..++.++....                      .....+.+.....+.+.....+...+++.|.+|++.|+++.+
T Consensus        72 ~~~~~~~~~~~~~~~~----------------------~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~  129 (485)
T TIGR00711        72 ISTFAFTLGSLLCGVA----------------------PNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMA  129 (485)
T ss_pred             HHHHHHHHHHHHHhCc----------------------CCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHH
Confidence            9988777776665542                      222333344444444444455677888999999999999999


Q ss_pred             HHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheee-eeccC
Q 045073          315 ISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFM-VPETN  367 (402)
Q Consensus       315 ~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~-~~et~  367 (402)
                      +......+|..++|.+.+.+.+..  +|++.|++.+.+.++..++.++ +||++
T Consensus       130 ~~~~~~~~g~~~g~~~~~~l~~~~--~w~~~f~~~~~~~~~~~~~~~~~~~~~~  181 (485)
T TIGR00711       130 IWGLTVLVAPALGPTLGGWIIENY--HWRWIFLINVPIGIIVVVVAFFILPRDK  181 (485)
T ss_pred             HHHHHHHHHhhhhhccHhHhccCc--CceehhhhhhHHHHHHHHHHHHHcCCcc
Confidence            999999999999999999988876  8999998887777666555443 46543

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.

>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]

Probab=99.49  E-value=2.1e-13  Score=118.08  Aligned_cols=272  Identities=13%  Similarity=0.074  Sum_probs=139.3

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      .++.++++|+.++|+|++.++.++..+++|.++||.+|+++......                 ...+..-.+-++..+.
T Consensus       139 ~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~-----------------~g~~p~alP~~~v~i~  201 (451)
T KOG2615|consen  139 SVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSI-----------------SGSYPFALPCLLVFIL  201 (451)
T ss_pred             HHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhh-----------------hccCchHHHHHHHHHH
Confidence            35678999999999999999999999999999999999999741100                 0222222333333344


Q ss_pred             HHH-HHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073           83 AAL-TYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST  161 (402)
Q Consensus        83 ~~~-~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (402)
                      +.. ..+..+++||+-..   ++++  ++...+.+..+++  .+..+.     .........++...+..........+.
T Consensus       202 a~~~v~~~~~~lpETL~~---rk~~--~~~~~~~~~~~~~--~~~~~~-----~~~~~v~~lrn~p~~~~i~~~~i~~l~  269 (451)
T KOG2615|consen  202 AAGDVTFFPWFLPETLPL---RKRN--DEHSTLQEAADDR--LALLKF-----ARIFKVAALRNPPLLDFISVLRIFGLH  269 (451)
T ss_pred             HHHHHHHHHHhCCccccc---hhhc--ccccchhhhhhhh--hhhcch-----hhhhhhhhhcCccccchHHHHHHHHHH
Confidence            443 45566789998321   1111  1111111111110  000000     000000111111111100011111222


Q ss_pred             HHHHHHHHHHHHhhhhhhh--hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccc--hhHHHHHHH
Q 045073          162 WFLLDIAFYTINLAQKDIY--PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIG--RFIIQLGGF  237 (402)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g--rr~~~~~~~  237 (402)
                      .+.+... |....+.+..+  +.+|+++.+.+.            +....++...+.........+|.+  -+-.+..+.
T Consensus       270 ~~ly~~l-~s~~~~t~~~l~~~rfg~ss~~~G~------------vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l  336 (451)
T KOG2615|consen  270 YFLYLEL-FSGLENTVLFLTHGRFGYSSMQQGK------------VLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSL  336 (451)
T ss_pred             HHHHHHH-HHHHHhhHHHhhcCccCCChhhhee------------eeehhhHHHHHHHHhccccccccccchhhHHHHHH
Confidence            2222222 22222333344  568899888665            444444444443333444455544  333444443


Q ss_pred             HHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHH
Q 045073          238 LLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISA  317 (402)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~  317 (402)
                      .++.-..+++...                      .....+.+......+......+....+.....|.+.||+..|+..
T Consensus       337 ~~~vP~~llls~~----------------------~~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~  394 (451)
T KOG2615|consen  337 LLIVPAFLLLSLA----------------------RTPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFR  394 (451)
T ss_pred             HHHHHHHHHHhcc----------------------ccchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHH
Confidence            3332222222221                      111222222222233333344556677888999999999999999


Q ss_pred             HHHHHhHHHHhHhHHhhhhcc
Q 045073          318 AAGKAGAIVGAFGVQYYTQKG  338 (402)
Q Consensus       318 ~~~~~g~~i~~~~~~~~~~~~  338 (402)
                      ..+.++.++||.+.|.+..+.
T Consensus       395 Sl~alaRaiGPlv~g~i~~Ws  415 (451)
T KOG2615|consen  395 SLGALARAIGPLVSGVIFSWS  415 (451)
T ss_pred             HHHHHHHHhhhhhhheeEEEe
Confidence            999999999999998887654

>PRK10504 putative transporter; Provisional

Probab=99.49  E-value=7.7e-13  Score=125.60  Aligned_cols=176  Identities=13%  Similarity=0.124  Sum_probs=130.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073          154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ  233 (402)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~  233 (402)
                      .++..+...+......+....+.|.+.+++|.+..+.+.            ......++..++.++.|+++||+|||+++
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~d~~g~r~~~   78 (471)
T PRK10504         11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHM------------VIVSYVLTVAVMLPASGWLADRVGVRNIF   78 (471)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhchHHHH
Confidence            455566666666667777788899999999999886554            55666677778888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073          234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH  313 (402)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~  313 (402)
                      +.+..+.+++.+.....                     .+. ..+.+.....+.+.....+...+++.|.+|++.|+++.
T Consensus        79 ~~~~~~~~~~~~~~~~~---------------------~~~-~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (471)
T PRK10504         79 FTAIVLFTLGSLFCALS---------------------GTL-NELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAM  136 (471)
T ss_pred             HHHHHHHHHHHHHHHHh---------------------CCH-HHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHH
Confidence            98877776666554432                     122 22333333334433444556777889999999999999


Q ss_pred             hHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee-ec
Q 045073          314 GISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV-PE  365 (402)
Q Consensus       314 ~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~-~e  365 (402)
                      ++......+|..++|.+.+.+.+..  +|++.|.+...+..+..+..... |+
T Consensus       137 ~~~~~~~~~g~~~g~~~~g~l~~~~--gw~~~f~~~~~~~~l~~~~~~~~~~~  187 (471)
T PRK10504        137 TFVTLPGQVGPLLGPALGGLLVEYA--SWHWIFLINIPVGIIGAIATLMLMPN  187 (471)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHhhc--cHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            9999999999999999999998877  89999988777766665555433 44

>PRK03893 putative sialic acid transporter; Provisional

Probab=99.49  E-value=1.1e-12  Score=125.55  Aligned_cols=179  Identities=17%  Similarity=0.158  Sum_probs=129.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhH
Q 045073          152 GLHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFI  231 (402)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~  231 (402)
                      ++.+..+.+..+.............|.+.+++|.+..+.+.            ......++..++.++.|+++||+|||+
T Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~g~r~   86 (496)
T PRK03893         19 WKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAAS------------LISAAFISRWFGGLLLGAMGDRYGRRL   86 (496)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCcHH
Confidence            34555666666666666667777788888889998876554            666677788888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhh
Q 045073          232 IQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRST  311 (402)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~  311 (402)
                      .+..+.++.+++.++....                     .+ .....+.....+++..+..+....++.|.+|++.|+.
T Consensus        87 ~~~~~~~~~~~~~~~~~~~---------------------~~-~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~  144 (496)
T PRK03893         87 AMVISIVLFSVGTLACGFA---------------------PG-YWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNK  144 (496)
T ss_pred             HHHHHHHHHHHHHHHHHHH---------------------hH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence            9998888777777666653                     22 2333333334444344445566778899999999999


Q ss_pred             hhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeecc
Q 045073          312 CHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPET  366 (402)
Q Consensus       312 ~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et  366 (402)
                      +.++......+|..+++.+.+.+.+..  +|+..|.+.++..++..+....+||.
T Consensus       145 ~~~~~~~~~~~g~~~~~~~~~~l~~~~--~w~~~f~~~~~~~~~~~~~~~~~p~~  197 (496)
T PRK03893        145 ASGFLISGFSIGAVVAAQVYSLVVPVW--GWRALFFIGILPIIFALWLRKNLPEA  197 (496)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccC--CHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence            999999999999999999999888876  89988877544444433333334554

>TIGR00805 oat sodium-independent organic anion transporter

Probab=99.49  E-value=9.4e-12  Score=121.02  Aligned_cols=217  Identities=12%  Similarity=0.128  Sum_probs=123.6

Q ss_pred             CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccc--CcccccccccccCCCCCc--hhHHHHH
Q 045073            2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYN--APAFNRNHVLSAQPQGDY--LWRIVLM   77 (402)
Q Consensus         2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~Wr~~f~   77 (402)
                      ++.+.+|+.|++|+++|+++++++..+..+|.++++.+++.+...+.+...  .+.....|     .+..|  +||..|+
T Consensus       190 ~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~-----~dprWiGaWwl~Fl  264 (633)
T TIGR00805       190 FPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTP-----TDPRWIGAWWIGFL  264 (633)
T ss_pred             hhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCC-----CCccHHHHHHHHHH
Confidence            467889999999999999999999999999999999999998754321000  00000000     01122  4888898


Q ss_pred             HhHHHHHHHHHHHhhccCC-chhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHH
Q 045073           78 FGAVPAALTYYWRMKMPET-ARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLL  156 (402)
Q Consensus        78 ~~~i~~~~~~~~~~~~pes-p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (402)
                      +.++++++..+..+++|+. |+..   .+.+.+..+. .. .+  .. +.+.........+...+.++ ..+++  +.++
T Consensus       265 i~g~l~~l~~v~l~~~p~~lp~~~---~~~~~~~~~~-~~-~~--~~-~~~~~~~~~~~~~~~~~~~~-~Ll~n--~~f~  333 (633)
T TIGR00805       265 ICGGVALLTSIPFFFFPKALPKEG---KRVNVDVHET-EK-LE--KS-EDKSRKKNSDITKDFPKIIK-RLLCN--PIYM  333 (633)
T ss_pred             HHHHHHHHHHHHHHhCccccCCcc---cccchhhhhh-hc-cc--cc-ccccchhhhhhHHHHHHHHH-HHHcC--cHHH
Confidence            8777776655555566654 3210   0000000000 00 00  00 00000000000000011111 11222  3566


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHh-hhhhhhhhHHHhhhccc--hhHH
Q 045073          157 GTTSTWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALF-ATVPGYWFTVFLIDRIG--RFII  232 (402)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~g~l~dr~g--rr~~  232 (402)
                      ...+..+.....+++...|+|.++++ +|+++.+++.            +.....+ +.++|.+++|+++||++  .|+.
T Consensus       334 ~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~------------l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~  401 (633)
T TIGR00805       334 LVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANF------------LIGVVNLPAAGLGYLIGGFIMKKFKLNVKKA  401 (633)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHH------------HhhhhhhhHHHHHHhhhhheeeeecccHHHH
Confidence            66666667777888888999999975 8888887554            4333333 56788889999999998  4566


Q ss_pred             HHHHHHHHHHHHHH
Q 045073          233 QLGGFLLMSICMAI  246 (402)
Q Consensus       233 ~~~~~~~~~~~~~~  246 (402)
                      +.++.++..++.+.
T Consensus       402 ~~~~~~~~~~~~~~  415 (633)
T TIGR00805       402 AYFAICLSTLSYLL  415 (633)
T ss_pred             HHHHHHHHHHHHHH
Confidence            66666555555433

Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.

>PRK10207 dipeptide/tripeptide permease B; Provisional

Probab=99.49  E-value=3.1e-12  Score=120.95  Aligned_cols=146  Identities=12%  Similarity=0.042  Sum_probs=86.8

Q ss_pred             HHHHHHhhhhhhhhhHHHhhhccchhH-------HHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHH
Q 045073          205 MFLVALFATVPGYWFTVFLIDRIGRFI-------IQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWF  277 (402)
Q Consensus       205 ~~~~~~~~~~~g~~~~g~l~dr~grr~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (402)
                      ....+.+..++.+++.+++.||+++|+       .+.+|+++.+++++.+..........+  .         ..+.++.
T Consensus       314 ~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~--~---------~~s~~~~  382 (489)
T PRK10207        314 FQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQ--G---------LTSPWFI  382 (489)
T ss_pred             HHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCC--C---------ccCHHHH
Confidence            334444555566677889999999886       366677776666554432211111000  0         0223333


Q ss_pred             HHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhcc--------CCcchhhHHHH
Q 045073          278 MILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKG--------DKQIKQSIITL  349 (402)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~--------~~~~~~~~~~~  349 (402)
                      +..+ +..+.+.....+....++.+..|++.++.++|+.+....+|+.++..+........        ...+.+.|...
T Consensus       383 i~~~-~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~  461 (489)
T PRK10207        383 VLVY-LFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKI  461 (489)
T ss_pred             HHHH-HHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHH
Confidence            3333 33334344455666778889999999999999999999999998887765442100        00244666666


Q ss_pred             HHHHHHHhhheee
Q 045073          350 AVVNFLGFLCSFM  362 (402)
Q Consensus       350 ~~~~~i~~i~~~~  362 (402)
                      ++..++..++.+.
T Consensus       462 ~~~~~~~~v~~~~  474 (489)
T PRK10207        462 GLVTLGVAVVMAL  474 (489)
T ss_pred             HHHHHHHHHHHHH
Confidence            6666655555444

>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial

Probab=99.49  E-value=1.3e-12  Score=123.41  Aligned_cols=174  Identities=11%  Similarity=-0.020  Sum_probs=129.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhhhh---cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhc-cc
Q 045073          153 LHLLGTTSTWFLLDIAFYTINLAQKDIYPA---TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDR-IG  228 (402)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~g  228 (402)
                      +.++.+.+..+....++|+...++|.|+++   +|++..+++.            ......++..++.+++|+++|| +|
T Consensus        10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~------------~~~~~~~~~~~~~~~~G~laDr~~G   77 (475)
T TIGR00924        10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFI------------IFGAYSALVYLLTSVGWWFGDRVWG   77 (475)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHH------------HHHHHHHHHHHHHhhHHHHHHhhcc
Confidence            355666666777778889999999999865   7888877665            6777778888999999999999 89


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccch
Q 045073          229 RFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARL  308 (402)
Q Consensus       229 rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~  308 (402)
                      ||+.+..+.++.+++.+++...                     .+. ....+.....+.+.....+...++.++.+|++.
T Consensus        78 ~~~~l~~~~~~~~~g~~~~~~~---------------------~~~-~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~  135 (475)
T TIGR00924        78 TKKTMVLGGIVLMLGHFMLAMS---------------------IYP-DLIFYGLGTIAVGSGLFKANPSSMVGKLYERGD  135 (475)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhc---------------------ccH-hHHHHHHHHHHhccccccCCHHHHHHHhcCCCC
Confidence            9999999998888877766652                     111 222222222233333345566778889998754


Q ss_pred             ---hhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheee
Q 045073          309 ---RSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFM  362 (402)
Q Consensus       309 ---r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~  362 (402)
                         |+++.++.+...++|.+++|.+.+.+.+..  +|+..|.+.++..+++.+..++
T Consensus       136 ~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~--g~~~~f~~~~~~~~~~~l~~~~  190 (475)
T TIGR00924       136 MPRRDGGFTLFYMSINIGSFISPLLAGVIAENY--GYHVGFNLAAVGMVIGLLTFFA  190 (475)
T ss_pred             cccccceehhHHHHHHHHHHHHHHHHHHHHHhc--ChHHHHHHHHHHHHHHHHHHHH
Confidence               889999999999999999999999998877  8999998877666555444333

The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.

>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms

Probab=99.48  E-value=6.2e-13  Score=121.12  Aligned_cols=161  Identities=19%  Similarity=0.241  Sum_probs=122.5

Q ss_pred             HHHHHHHHHHHhhhh-hhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHH
Q 045073          163 FLLDIAFYTINLAQK-DIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMS  241 (402)
Q Consensus       163 ~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~  241 (402)
                      +.............| .+.+++|.+..+.+.            ......++..++.++.|+++||+|||+++..+.++.+
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~   73 (352)
T PF07690_consen    6 FLSGFGFSIISPALPLYLAEELGLSPSQIGL------------LFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFA   73 (352)
T ss_dssp             HHHHHHHHHHHHHHH-HHHCCSTTTSHCHHH------------HHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHccCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhh
Confidence            333444445555667 666788988887665            6777788888999999999999999999999988888


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHH
Q 045073          242 ICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGK  321 (402)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~  321 (402)
                      ++.++..+.                     .+.+ ...+..+..+.+.....+....++.|.+|++.|+++.++......
T Consensus        74 ~~~~~~~~~---------------------~~~~-~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  131 (352)
T PF07690_consen   74 LGSLLLAFA---------------------SNFW-LLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFS  131 (352)
T ss_dssp             HHHHHHHHH---------------------CCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHH
T ss_pred             hHHHHhhhh---------------------hhHH-HHhhhccccccccccccccccccccccchhhhhhhccccccchhh
Confidence            874444432                     1222 344444444444445566788889999999999999999999999


Q ss_pred             HhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhh
Q 045073          322 AGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLC  359 (402)
Q Consensus       322 ~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~  359 (402)
                      +|..+++.+.+.+.+..  +|+..|++.+++.++..++
T Consensus       132 ~g~~~g~~l~~~l~~~~--~~~~~~~~~~~~~~~~~il  167 (352)
T PF07690_consen  132 LGSILGPLLGGFLISYF--GWRWAFLISAILSLIAAIL  167 (352)
T ss_dssp             HHHHHHHHHHHHCCCHC--HHCCHHHHHHHHHHHHHHH
T ss_pred             hhhhcccchhhhhhhcc--ccccccccccchhhhhhhh
Confidence            99999999999998766  8899999999988888764

These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.

>PRK11462 putative transporter; Provisional

Probab=99.48  E-value=5.1e-12  Score=118.95  Aligned_cols=249  Identities=9%  Similarity=-0.037  Sum_probs=130.1

Q ss_pred             hhhhhhccC-cccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHH
Q 045073            6 AVIMSEYAN-KRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAA   84 (402)
Q Consensus         6 ~~~i~e~~~-~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~   84 (402)
                      .++..|.++ +++|.+..++...+..+|.++++.+...+....+.                .....+|+....+.+++++
T Consensus       131 ~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~----------------~~~~~g~~~~~~i~~ii~~  194 (460)
T PRK11462        131 CALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGG----------------DNKPLGFQGGIAVLSVVAF  194 (460)
T ss_pred             HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----------------CchhhhHHHHHHHHHHHHH
Confidence            356778886 79999999999999999998888887666543321                1133579888777666655


Q ss_pred             HHHHHH-hhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHHH
Q 045073           85 LTYYWR-MKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWF  163 (402)
Q Consensus        85 ~~~~~~-~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (402)
                      +..+.. ...+|.++-    ++.+                             .+.++.++....+|.++.+....+...
T Consensus       195 i~~~i~~~~~kE~~~~----~~~~-----------------------------~~~~~~l~~~~~Nk~~~~l~~~~~~~~  241 (460)
T PRK11462        195 MMLAFCFFTTKERVEA----PPTT-----------------------------TSMREDLRDIWQNDQWRIVGLLTIFNI  241 (460)
T ss_pred             HHHHHHHhcceeccCC----CccC-----------------------------CCHHHHHHHHhCChHHHHHHHHHHHHH
Confidence            544333 334553211    0000                             001111122222233333332322222


Q ss_pred             HHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHH
Q 045073          164 LLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSIC  243 (402)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~  243 (402)
                      .......+...|...+.  .|. ....+            .......++.+++.+++++++||+|+|+.+..+..+.++.
T Consensus       242 ~~~~~~~~~~~y~~~y~--~g~-~~~~~------------~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~  306 (460)
T PRK11462        242 LAVCVRGGAMMYYVTWI--LGT-PEVFV------------AFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVI  306 (460)
T ss_pred             HHHHHHHhHhhhhhhhh--cCC-hHHHH------------HHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence            22222223333333322  222 11111            1444556777888889999999999998876554433332


Q ss_pred             HHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccc-----cchh--hhhhhHH
Q 045073          244 MAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFP-----ARLR--STCHGIS  316 (402)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-----~~~r--~~~~~~~  316 (402)
                      .+++.+.    . .              ...........+ .+.......+..+++.+|...     +..|  |...+..
T Consensus       307 ~~~~~~~----~-~--------------~~~~~~~~~~~l-~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~  366 (460)
T PRK11462        307 SLAMFFV----P-M--------------QASITMFVFIFV-IGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGT  366 (460)
T ss_pred             HHHHHHh----c-h--------------hHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHH
Confidence            2222211    0 0              111122222122 222223333445666676654     2244  4445666


Q ss_pred             HHHHHHhHHHHhHhHHhhhhcc
Q 045073          317 AAAGKAGAIVGAFGVQYYTQKG  338 (402)
Q Consensus       317 ~~~~~~g~~i~~~~~~~~~~~~  338 (402)
                      .....+|..+++.+.+.+.+..
T Consensus       367 ~f~~Klg~alg~~i~g~iL~~~  388 (460)
T PRK11462        367 LFVLKLGLAFGGALIGWMLAYG  388 (460)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHc
Confidence            6888899999998888777654

>TIGR00788 fbt folate/biopterin transporter

Probab=99.48  E-value=4e-13  Score=126.52  Aligned_cols=299  Identities=11%  Similarity=-0.010  Sum_probs=156.7

Q ss_pred             cchhhhhhccCcccchhHHHHHH---HHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhH
Q 045073            4 LSAVIMSEYANKRTRGAFIAAVF---AMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGA   80 (402)
Q Consensus         4 ~~~~~i~e~~~~~~Rg~~~~~~~---~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~   80 (402)
                      ++-+++.|..+ +++....+...   .+..+|.++++.+++.+.                       +..+||..|++.+
T Consensus       140 ~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~-----------------------~~~~~~~~f~~~a  195 (468)
T TIGR00788       140 LVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLL-----------------------DKTLTRILFLITA  195 (468)
T ss_pred             hHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHH-----------------------HhcCcchHHHHHH
Confidence            44577888888 55544433333   334589999999999886                       5578999999877


Q ss_pred             HHHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHH
Q 045073           81 VPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTS  160 (402)
Q Consensus        81 i~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (402)
                      ...++..+...+++|++...  ..+..++....... ......          ...+.....++....++.....+...+
T Consensus       196 ~l~ll~~~~~~~~~E~~~~~--~~~~~~~~~~~~~~-~~~~~~----------~~~~~~~~~l~~~l~~~~i~~~l~fif  262 (468)
T TIGR00788       196 ALLLLQLFVSNLSKERRAFV--RPRIGTYLEMNMAL-LTLGVL----------ANVKVQILGLRGAIQLLEIAKPLIFIF  262 (468)
T ss_pred             HHHHHHHHHHHhcccccccc--cccccccchhhhhh-hhhhHH----------HHHHHHHHHHHHHHhcHHHHHHHHHHH
Confidence            66666666667788864110  00000000000000 000000          000000000111111111111111111


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHH
Q 045073          161 TWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM  240 (402)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~  240 (402)
                      ..+. .........+. ......|+++...+.            ......++.+++..+.+++.+|++.|+++.++.++.
T Consensus       263 l~~~-~~~~~~~~~f~-~~~~~lG~s~~~~G~------------~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~  328 (468)
T TIGR00788       263 LSYA-NLPGASGSVFC-ATTQCLPGGPSFSGM------------SKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLY  328 (468)
T ss_pred             HHHh-hcCCCCceeEE-EEcccCCCCcchhhh------------HHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Confidence            1011 10100100111 111357888887665            666677888999999999999999999999887776


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHH
Q 045073          241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAG  320 (402)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~  320 (402)
                      +++..........+...         .+.  ...+.......+.......... ....++++..|++.+++..++.+.+.
T Consensus       329 ~~~~~~~~~l~~~~~~~---------~gi--~~~~~~~~~~~l~~~~~g~~~~-~~~~~~~~~~p~~~egt~~al~~s~~  396 (468)
T TIGR00788       329 TLSSLFDLILVKRWNLA---------FGI--SDEVFVLGDSIIAEVLAQLKFM-PFLVLLARLCPSGCESSVFALLASIL  396 (468)
T ss_pred             HHHHhCceeeeeccccc---------cCC--CCeeeeeehhHHHHHHHHHHHc-cHHHHHHHhCCCCceehHHHHHHHHH
Confidence            66554432211111000         000  0111111111111222223333 34678899999999999999999999


Q ss_pred             HHhHHHHhHhHHhhhhccCC---cchhh---HHHHHHHHHHHhhheeeeec
Q 045073          321 KAGAIVGAFGVQYYTQKGDK---QIKQS---IITLAVVNFLGFLCSFMVPE  365 (402)
Q Consensus       321 ~~g~~i~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~i~~i~~~~~~e  365 (402)
                      ++|..+++.+.+.+.+..+.   .+...   ..+..+..++...+.+++|+
T Consensus       397 ~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~l~~~~llP~  447 (468)
T TIGR00788       397 HLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLPLPLLHLLPR  447 (468)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHhCCC
Confidence            99999999988888887641   13322   22333334444555555686

The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.

>PRK10473 multidrug efflux system protein MdtL; Provisional

Probab=99.48  E-value=1e-12  Score=121.69  Aligned_cols=174  Identities=14%  Similarity=0.072  Sum_probs=123.9

Q ss_pred             HHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHH
Q 045073          159 TSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFL  238 (402)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~  238 (402)
                      ....+....+........|.+.+++|.+..+.+.            ......++..++.++.|+++||+|||+.+..+..
T Consensus         9 ~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~------------~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~   76 (392)
T PRK10473          9 FALVLLYPAGIDMYLVGLPRIAADLNASEAQLHI------------AFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAA   76 (392)
T ss_pred             HHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHH
Confidence            3333444445555556788888999998876554            6666777888888999999999999999998887


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHH
Q 045073          239 LMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAA  318 (402)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~  318 (402)
                      +..++.++....                     .+. ....+.....+.......+...+++.|.+|++.|+++.++.+.
T Consensus        77 ~~~i~~~~~~~~---------------------~~~-~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~  134 (392)
T PRK10473         77 LFIIASLLCSLA---------------------ETS-SLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNG  134 (392)
T ss_pred             HHHHHHHHHHHh---------------------CcH-HHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence            777776665542                     222 2222222232332233344567788999999999999999999


Q ss_pred             HHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeeccCC
Q 045073          319 AGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPETNG  368 (402)
Q Consensus       319 ~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~~  368 (402)
                      ...++..++|.+.+.+.+..  +|+..+++.+++.++..++.+ ++||++.
T Consensus       135 ~~~i~~~~~~~i~~~l~~~~--g~~~~~~~~~~~~~i~~~~~~~~~~~~~~  183 (392)
T PRK10473        135 ITCIIPVLAPVLGHLIMLKF--PWQSLFYTMAAMGILVLLLSLFILKETRP  183 (392)
T ss_pred             HHHHHHHHHHHHHHHHHhCc--ChHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence            99999999998888877665  888888888877776655544 4476643

>COG2270 Permeases of the major facilitator superfamily [General function prediction only]

Probab=99.47  E-value=5.6e-12  Score=111.41  Aligned_cols=293  Identities=16%  Similarity=0.139  Sum_probs=186.0

Q ss_pred             hhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCc-ccccccccccCCCCCchhHHHHHHhHHHHH
Q 045073            6 AVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAP-AFNRNHVLSAQPQGDYLWRIVLMFGAVPAA   84 (402)
Q Consensus         6 ~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~   84 (402)
                      .+++.+..++++-++..++-.....+|..+.-++........+.. ... ...+.|     +.+...=|..+.++++.-+
T Consensus       137 ds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~-~~~~~l~~l~-----~~~~~~~ri~~~l~A~W~l  210 (438)
T COG2270         137 DSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQT-GITIILLGLP-----PADGEDVRITGLLAALWWL  210 (438)
T ss_pred             hhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhccccc-ceeEEeeccC-----ccccccchhHHHHHHHHHH
Confidence            467788889988888888777777777777766654333111000 000 000001     1133456788887666554


Q ss_pred             H-HHHHHhhccCCchhHHhhhCChhHHH-HHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073           85 L-TYYWRMKMPETARYTALVEGNQKKAA-VDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW  162 (402)
Q Consensus        85 ~-~~~~~~~~pesp~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (402)
                      + .+.++...||.++-    ........ +..++                      .++.++....++   .+.......
T Consensus       211 i~~iPm~~~v~~~~~~----~~~~~~~l~~g~k~----------------------L~~t~k~i~~~~---~i~~FLiA~  261 (438)
T COG2270         211 LFALPMILNVHDAEKI----SSPPPTALRNGFKE----------------------LKSTFKEIRGRK---NLVLFLIAR  261 (438)
T ss_pred             HHHhHHHhcccccccc----cccchHHHHHHHHH----------------------HHHHHHHHhccc---chHHHHHHH
Confidence            4 55555666665431    00000100 00110                      001111111122   233333344


Q ss_pred             HHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHH
Q 045073          163 FLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMS  241 (402)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~  241 (402)
                      +...-+..+...+...+.. ++|++..+...            ......+.+++|+++.|++.||+|.|+++..+.++..
T Consensus       262 ~~~~DGv~til~~~~~fg~~~~gls~~~lll------------~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~  329 (438)
T COG2270         262 FFYIDGVNTILAMGGVFGAADLGLSSTELLL------------IGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILS  329 (438)
T ss_pred             HHHHhhHHHHHHHHHHHHHHHcCccHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHH
Confidence            4444455566666666665 78999887655            6777788899999999999999999999988877666


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHH
Q 045073          242 ICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGK  321 (402)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~  321 (402)
                      +..+...+..                    .  .....++.+..+.+..+.++..-++.+++.|++.-+...|+++..++
T Consensus       330 ~~~~~~~~~~--------------------~--~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgr  387 (438)
T COG2270         330 IAALYLIFLE--------------------G--ELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGR  387 (438)
T ss_pred             HHHHHHHHcc--------------------c--cHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhh
Confidence            6554444321                    1  12333444444555566777888999999999999999999999999


Q ss_pred             HhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeeccCC
Q 045073          322 AGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETNG  368 (402)
Q Consensus       322 ~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~~  368 (402)
                      ..+++||++.+.+.+.++ +.+..+....++.++++++.+.+|+.++
T Consensus       388 a~S~~gp~lv~v~t~iTg-~~r~g~~~i~vll~iGl~~L~~v~~~~~  433 (438)
T COG2270         388 AASFLGPFLVAVITQITG-SSRAGVLSIIVLLLIGLLLLLRVKVPGR  433 (438)
T ss_pred             HHHHHHHHHHHHHHHHhc-chhhHHHHHHHHHHhhHhhEEeecCCCC
Confidence            999999999999999886 5677777778888889888888765533

>PRK15402 multidrug efflux system translocase MdfA; Provisional

Probab=99.46  E-value=1.7e-12  Score=120.80  Aligned_cols=165  Identities=15%  Similarity=0.075  Sum_probs=117.8

Q ss_pred             HHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 045073          168 AFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAIL  247 (402)
Q Consensus       168 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~  247 (402)
                      .........|.+.++++.+..+.+.            ......++..++.++.|+++||+|||+.+..+....+++.+..
T Consensus        28 ~~~~~~~~~~~~~~~~~~s~~~~~~------------~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~   95 (406)
T PRK15402         28 ANDMIQPGMLAVVEDFNAGAEWVPT------------SMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAI   95 (406)
T ss_pred             hhhhHhcchHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence            3344444556677889988776554            5667778888888999999999999999998887777776665


Q ss_pred             HHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHH
Q 045073          248 GARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVG  327 (402)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~  327 (402)
                      ...                     .+. ..........+.......+...++..|.+|++.|.++.++......++..++
T Consensus        96 ~~~---------------------~~~-~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g  153 (406)
T PRK15402         96 LLA---------------------QSI-EQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLG  153 (406)
T ss_pred             HHH---------------------ccH-HHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHH
Confidence            543                     222 2222233332322223334566778899999999999999888888889999


Q ss_pred             hHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeeccCC
Q 045073          328 AFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPETNG  368 (402)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~~  368 (402)
                      |.+.+.+.+..  +|+..+++.+++.++..+..+ ..||+++
T Consensus       154 ~~i~~~l~~~~--~w~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (406)
T PRK15402        154 PLVGAALIHVL--PWRGMFVLFAALAALSFFGLWRAMPETAG  193 (406)
T ss_pred             HHHHHHHHHcc--CccHHHHHHHHHHHHHHHHHHHhCCCCCc
Confidence            99988888766  899999888888777666544 3476643

>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional

Probab=99.46  E-value=2.6e-12  Score=121.15  Aligned_cols=164  Identities=13%  Similarity=0.012  Sum_probs=108.9

Q ss_pred             HHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHH
Q 045073          171 TINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGAR  250 (402)
Q Consensus       171 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~  250 (402)
                      ......|.+.++ |++..+.+.            ......++..++.++.|+++||+|||+++..+.++.+++.+++.+.
T Consensus        47 ~~~~~~p~l~~~-g~s~~~~g~------------~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~  113 (452)
T PRK11273         47 NFALAMPYLVEQ-GFSRGDLGF------------ALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFV  113 (452)
T ss_pred             HHHHhhHHHHHc-CCCHHHHHH------------HHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhh
Confidence            345566776666 888887665            6777888888999999999999999999999988877777666553


Q ss_pred             hhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHH-HHhH
Q 045073          251 YDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAI-VGAF  329 (402)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~-i~~~  329 (402)
                      ...                  ......+.+.....+.+.....+.....+.|.+|++.|+++.|+.+....+|+. .++.
T Consensus       114 ~~~------------------~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l  175 (452)
T PRK11273        114 PWA------------------TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLL  175 (452)
T ss_pred             hcc------------------cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHH
Confidence            110                  111222222223333333333444456678999999999999999888888764 4554


Q ss_pred             hHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeeccC
Q 045073          330 GVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPETN  367 (402)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~  367 (402)
                      .........  +|+..|++.+++.++..++.+ ++||+.
T Consensus       176 ~~~~~~~~~--gw~~~f~i~~~~~~~~~~l~~~~~~~~~  212 (452)
T PRK11273        176 FLLGMAWFN--DWHAALYMPAFAAILVALFAFAMMRDTP  212 (452)
T ss_pred             HHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHccCCH
Confidence            332232222  889999888877666544443 456653

>TIGR00900 2A0121 H+ Antiporter protein

Probab=99.46  E-value=1.1e-12  Score=119.97  Aligned_cols=165  Identities=18%  Similarity=0.024  Sum_probs=118.5

Q ss_pred             HHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 045073          168 AFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAIL  247 (402)
Q Consensus       168 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~  247 (402)
                      .........|.+..+.+.+..+.+.            ......++.+++.++.|+++||+|||+.+..+..+..++.++.
T Consensus        14 ~~~~~~~~~~~~~~~~~~s~~~~g~------------~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~   81 (365)
T TIGR00900        14 GTAITQVALPLYVLAGTGSASVLSL------------AALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVL   81 (365)
T ss_pred             HHHHHHHHHHHHHHHhhccHHHHHH------------HHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHH
Confidence            3334444556677777777776554            7777788888899999999999999999998887777766655


Q ss_pred             HHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHH
Q 045073          248 GARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVG  327 (402)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~  327 (402)
                      .......                 ......+.+.....+.+.....+...++..|.+|++.|+++.++.+....+|.+++
T Consensus        82 ~~~~~~~-----------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g  144 (365)
T TIGR00900        82 PFVALLG-----------------GLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVG  144 (365)
T ss_pred             HHHHHcC-----------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHH
Confidence            5442110                 11222333333333333344455677889999999999999999999999999999


Q ss_pred             hHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073          328 AFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV  363 (402)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~  363 (402)
                      |.+.+.+.+..  +|+..|++.++..++..++.+.+
T Consensus       145 ~~l~~~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~  178 (365)
T TIGR00900       145 PGIGGLMYATL--GIKWAIWVDAVGFAISALLIVSV  178 (365)
T ss_pred             HHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999988877  89988888777666665554433

>PRK10207 dipeptide/tripeptide permease B; Provisional

Probab=99.45  E-value=3e-12  Score=121.02  Aligned_cols=175  Identities=9%  Similarity=0.003  Sum_probs=124.5

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhc-c
Q 045073          150 KHGLHLLGTTSTWFLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDR-I  227 (402)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~  227 (402)
                      ++++.++.+++..+.....+|+...+++.|++ ++|++..+.+.            ..........+..+++|+++|| +
T Consensus        11 ~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~------------i~~~~~~~~~~~~~~~G~laDr~~   78 (489)
T PRK10207         11 QQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFI------------TFGAFAALVYGLISIGGYVGDHLL   78 (489)
T ss_pred             cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHhhHHHhhhhcc
Confidence            34456777777777778899999988888875 48887776443            3333333444445689999999 9


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccc
Q 045073          228 GRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPAR  307 (402)
Q Consensus       228 grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~  307 (402)
                      |||+.++.+.++.+++.+.+.+..                     .....+.+.....+.+.....+...+++.|.+|++
T Consensus        79 G~r~~~~~g~~~~~~g~~~~~~~~---------------------~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~  137 (489)
T PRK10207         79 GTKRTIVLGAIVLAIGYFMTGMSL---------------------LKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPK  137 (489)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhc---------------------cchhHHHHHHHHHHhccccccCCHHHHHHHhcCCC
Confidence            999999999999888887766531                     11112222222333334445566778899999887


Q ss_pred             --hhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhh
Q 045073          308 --LRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLC  359 (402)
Q Consensus       308 --~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~  359 (402)
                        .|+.+.++.....++|.+++|.+.+++.+..  +|++.|++.++..+++.+.
T Consensus       138 ~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~--gw~~~F~i~~i~~~~~~~~  189 (489)
T PRK10207        138 DPRLDGAFTLFYMSINIGSLISLSLAPVIADKF--GYSVTYNLCGAGLIIALLV  189 (489)
T ss_pred             chhhhcchhHHHHHHHHHHHHHHHHHHHHHHhh--ChHHHHHHHHHHHHHHHHH
Confidence              4577899999999999999999999999887  8999998865544444433

>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial

Probab=99.45  E-value=1.7e-11  Score=115.76  Aligned_cols=143  Identities=15%  Similarity=0.101  Sum_probs=86.7

Q ss_pred             HHHHHHhhhhhhhhhHH----Hhhhc-cchhHHH--HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHH
Q 045073          205 MFLVALFATVPGYWFTV----FLIDR-IGRFIIQ--LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWF  277 (402)
Q Consensus       205 ~~~~~~~~~~~g~~~~g----~l~dr-~grr~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (402)
                      ...++.+..++...+..    ++.+| .+.+...  .+|+++.+++++.+++........             ...+.++
T Consensus       317 ~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~-------------~~~s~~~  383 (475)
T TIGR00924       317 FQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAG-------------GLTSPWF  383 (475)
T ss_pred             HHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCC-------------CccCHHH
Confidence            44444444444444433    34443 2223333  567777777766665432211110             0122333


Q ss_pred             HHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHh
Q 045073          278 MILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGF  357 (402)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  357 (402)
                      .+...+..+.+.....|...++..+..|++.||+.+|+......+|..+++.+.....+..  ++...|...++..++..
T Consensus       384 ~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  461 (475)
T TIGR00924       384 MVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQ--GVTGVFGKIGLVTLLVG  461 (475)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--chhhHHHHHHHHHHHHH
Confidence            3333444445556667788889999999999999999999999999999988877665543  56667777666666555


Q ss_pred             hheee
Q 045073          358 LCSFM  362 (402)
Q Consensus       358 i~~~~  362 (402)
                      ++.++
T Consensus       462 ~~~~~  466 (475)
T TIGR00924       462 VVMAL  466 (475)
T ss_pred             HHHHH
Confidence            55443

The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=99.44  E-value=1.2e-12  Score=124.29  Aligned_cols=142  Identities=20%  Similarity=0.095  Sum_probs=104.7

Q ss_pred             HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073          205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT  284 (402)
Q Consensus       205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (402)
                      ......++..++.++.|+++||+|||+.+..+.++..++.++......                   ......+++...+
T Consensus        76 ~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~r~l  136 (481)
T TIGR00879        76 VVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAF-------------------ALSVEMLIVGRVL  136 (481)
T ss_pred             HHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhcc-------------------ccchHHHHHHHHH
Confidence            677788889999999999999999999999988887777666644311                   1111233333333


Q ss_pred             HHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhH---HhhhhccCCcchhhHHHHHHHHHHHhhhee
Q 045073          285 LFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGV---QYYTQKGDKQIKQSIITLAVVNFLGFLCSF  361 (402)
Q Consensus       285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~  361 (402)
                      .+.+.....+....++.|.+|++.|+++.++.+....+|.++++.+.   ....+..  +|++.|++.++..++..+..+
T Consensus       137 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~--~w~~~f~~~~~~~~~~~~~~~  214 (481)
T TIGR00879       137 LGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTL--GWRIPLGLQLIPAGLLFLGLF  214 (481)
T ss_pred             HHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCc--cHHHHHHHHHHHHHHHHHHHh
Confidence            34333444556778899999999999999999999999999999887   4444444  899999987776666666666


Q ss_pred             eeeccC
Q 045073          362 MVPETN  367 (402)
Q Consensus       362 ~~~et~  367 (402)
                      ++||+.
T Consensus       215 ~l~~~~  220 (481)
T TIGR00879       215 FLPESP  220 (481)
T ss_pred             cCCCCh
Confidence            677764

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

>PRK10091 MFS transport protein AraJ; Provisional

Probab=99.44  E-value=1.8e-12  Score=119.45  Aligned_cols=178  Identities=17%  Similarity=0.092  Sum_probs=129.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073          154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ  233 (402)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~  233 (402)
                      .++...+..+......+......|.+.+++|.+..+.+.            ......++..++.++.|++.||+|||+++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~------------~~s~~~~~~~~~~~~~g~l~dr~g~r~~~   71 (382)
T PRK10091          4 VILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGH------------MISYYALGVVVGAPIIALFSSRYSLKHIL   71 (382)
T ss_pred             hHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhH------------HHHHHHHHHHHHHHHHHHHHccCccHHHH
Confidence            344555555555556666677788888999998887665            67778888999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073          234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH  313 (402)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~  313 (402)
                      ..+..+.+++.++....                     .+. ..+.+.....+.......+....+..|.+|++.|+.+.
T Consensus        72 ~~~~~~~~~~~~l~~~~---------------------~~~-~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (382)
T PRK10091         72 LFLVALCVIGNAMFTLS---------------------SSY-LMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAV  129 (382)
T ss_pred             HHHHHHHHHHHHHHHHh---------------------CcH-HHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHH
Confidence            99988888877766553                     222 33333333333322222334456678999999999999


Q ss_pred             hHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeeccC
Q 045073          314 GISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPETN  367 (402)
Q Consensus       314 ~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~  367 (402)
                      ++......++..+++.+.+.+.+..  +|++.|.+.+++.++..+..+ ++||.+
T Consensus       130 ~~~~~~~~~g~~~g~~l~~~l~~~~--gwr~~f~~~~~~~~~~~~~~~~~lp~~~  182 (382)
T PRK10091        130 AGMVSGMTVANLLGIPLGTYLSQEF--SWRYTFLLIAVFNIAVLASIYFWVPDIR  182 (382)
T ss_pred             HHHHHHHHHHHHHhccHHHHHhhhc--cHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence            9999888999999999888887766  899999988887766555433 457653

>TIGR00712 glpT glycerol-3-phosphate transporter

Probab=99.43  E-value=2.5e-12  Score=120.79  Aligned_cols=181  Identities=13%  Similarity=0.032  Sum_probs=118.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073          154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ  233 (402)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~  233 (402)
                      .++...+.+..............|.+.+ .|.+..+.+.            ......++..++.++.|+++||+|||+.+
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~------------~~~~~~~~~~~~~~~~G~l~dr~g~~~~~   94 (438)
T TIGR00712        28 VFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGF------------ALSAISIAYGFSKFIMGSVSDRSNPRVFL   94 (438)
T ss_pred             HHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHH------------HHHHHHHHHHHhhhccchhhhccCCceeh
Confidence            3344444444433333334445565554 6888876655            67777888889999999999999999998


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073          234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH  313 (402)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~  313 (402)
                      ..+.++.+++.+.......    .              ........+.....+.......+.....+.|.+|++.|+++.
T Consensus        95 ~~~~~~~~~~~~~~~~~~~----~--------------~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~  156 (438)
T TIGR00712        95 PAGLILSAAVMLLMGFVPW----A--------------TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIV  156 (438)
T ss_pred             HHHHHHHHHHHHHHhcccc----c--------------cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHH
Confidence            8887777776655443210    0              111222222222333323333445566778999999999999


Q ss_pred             hHHHHHHHHhHHHHhHhHHhhhh-ccCCcchhhHHHHHHHHHHHhhhee-eeeccC
Q 045073          314 GISAAAGKAGAIVGAFGVQYYTQ-KGDKQIKQSIITLAVVNFLGFLCSF-MVPETN  367 (402)
Q Consensus       314 ~~~~~~~~~g~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~  367 (402)
                      ++.+....+++.+++.+.+...+ ..  +|+..|++.+++.++..+..+ ++||++
T Consensus       157 ~~~~~~~~~g~~~~~~l~~~~~~~~~--~w~~~f~~~~~~~~i~~~~~~~~~~~~~  210 (438)
T TIGR00712       157 SIWNCAHNIGGGIPPLLVLLGMAWFN--DWHAALYFPAICAIIVALFAFAMMRDTP  210 (438)
T ss_pred             HHHHHHHHhHhHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence            99999999999988877665443 23  899999998888776554444 456643

This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.

>PRK10077 xylE D-xylose transporter XylE; Provisional

Probab=99.43  E-value=2.6e-12  Score=122.33  Aligned_cols=151  Identities=16%  Similarity=0.046  Sum_probs=107.8

Q ss_pred             HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073          205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT  284 (402)
Q Consensus       205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (402)
                      ......++.+++.++.|+++||+|||++++.+..+.+++.+..+...........          .+...+..+++..+.
T Consensus        60 ~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~R~l  129 (479)
T PRK10077         60 CVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGP----------DNTGYVPEFVIYRII  129 (479)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccc----------cchhHHHHHHHHHHH
Confidence            7778888899999999999999999999999988877776655542111100000          001223334455555


Q ss_pred             HHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhh--------hccCCcchhhHHHHHHHHHHH
Q 045073          285 LFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYT--------QKGDKQIKQSIITLAVVNFLG  356 (402)
Q Consensus       285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~i~  356 (402)
                      .+.+..+..+...++++|.+|++.|+++.++......+|..+++.+...+.        +..  +|++.|++.+++.++.
T Consensus       130 ~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~--gWr~~f~~~~~~~~~~  207 (479)
T PRK10077        130 GGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTD--GWRYMFASEAIPALLF  207 (479)
T ss_pred             HhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccC--ChHHHHHHHHHHHHHH
Confidence            555556666778889999999999999999999888888888876554432        222  8999999888777776


Q ss_pred             hhheeeeeccC
Q 045073          357 FLCSFMVPETN  367 (402)
Q Consensus       357 ~i~~~~~~et~  367 (402)
                      .+..+++||+.
T Consensus       208 ~~~~~~l~~s~  218 (479)
T PRK10077        208 LMLLYFVPETP  218 (479)
T ss_pred             HHHHHcCCCCc
Confidence            66666678874

>TIGR00903 2A0129 major facilitator 4 family protein

Probab=99.43  E-value=2.4e-12  Score=117.47  Aligned_cols=164  Identities=12%  Similarity=0.039  Sum_probs=114.9

Q ss_pred             HHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 045073          168 AFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAIL  247 (402)
Q Consensus       168 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~  247 (402)
                      .........|.+.+++|.+..+.+.            ......++..++.+..|+++||+|||+++..+......+.. .
T Consensus         6 ~~~~~~~~lp~i~~~~~~s~~~~g~------------~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~-~   72 (368)
T TIGR00903         6 IWVTFSPVLSLVAEDIDVSKEELGL------------LAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAG-R   72 (368)
T ss_pred             HHHHHHhhHHHHHHHhCcCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH-H
Confidence            4445556678888899999887665            66667778888888999999999999876655433333221 1


Q ss_pred             HHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHH
Q 045073          248 GARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVG  327 (402)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~  327 (402)
                      ...                     ......+.+..+..+.+... ........+|.+|++.|+++.++......+|..++
T Consensus        73 ~~~---------------------~~~~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~  130 (368)
T TIGR00903        73 LLD---------------------PFNYEWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFA  130 (368)
T ss_pred             HHH---------------------hccHHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Confidence            111                     11223344444443333222 33445556899999999999999999999999999


Q ss_pred             hHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeeccCC
Q 045073          328 AFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPETNG  368 (402)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~~  368 (402)
                      +.+.+.+.+..  +|+..|.+.+++.++..++.+ ++||+++
T Consensus       131 ~~~~~~l~~~~--gWr~~f~~~~~l~~~~~~~~~~~lp~~p~  170 (368)
T TIGR00903       131 LAAGLKIYTAG--GLQLLIIPIAAVAAAGIILVLAALPALPF  170 (368)
T ss_pred             HHHHHHHHHcc--chHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence            99999888776  999999998888776655544 4577543

This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.

>PRK11652 emrD multidrug resistance protein D; Provisional

Probab=99.42  E-value=3.5e-12  Score=118.18  Aligned_cols=178  Identities=12%  Similarity=0.001  Sum_probs=121.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073          154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ  233 (402)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~  233 (402)
                      .++....................|.+.+++|.++.+.+.            ......++..++.++.|+++||+|||+.+
T Consensus         9 ~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~------------~~~~~~~~~~~~~~~~G~l~Dr~grr~~~   76 (394)
T PRK11652          9 LLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQA------------VMAAYLLTYGLSQLFYGPLSDRVGRRPVI   76 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHhhhhHHHhcCChHHH
Confidence            444444444444444444455568888889999887655            66777888888999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073          234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH  313 (402)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~  313 (402)
                      ..+..+..++.++....                     .+. ..+.+.....+.+.....+....+..|.++.+.|+.+.
T Consensus        77 ~~~~~~~~~~~~~~~~~---------------------~~~-~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (394)
T PRK11652         77 LVGMSIFILGTLVALFA---------------------HSL-TVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHAN  134 (394)
T ss_pred             HHHHHHHHHHHHHHHHH---------------------ccH-HHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHH
Confidence            98887777666554442                     122 22222222222222222334455678888989999999


Q ss_pred             hHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhe-eeeeccC
Q 045073          314 GISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCS-FMVPETN  367 (402)
Q Consensus       314 ~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~-~~~~et~  367 (402)
                      ++.+....++..++|.+.+.+.+..  +|+..|++.++..++..+.. ++.||++
T Consensus       135 ~~~~~~~~~~~~~g~~i~~~l~~~~--g~~~~f~~~~~~~~~~~~~~~~~~~~~~  187 (394)
T PRK11652        135 SLLNMGILVSPLLAPLIGGLLTTLF--GWRACYLFLLLLGAGVTFSMARWMPETR  187 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcc--ChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence            9998888899999999998888766  89999988877666544433 3457754

>PRK10406 alpha-ketoglutarate transporter; Provisional

Probab=99.42  E-value=7.3e-12  Score=117.42  Aligned_cols=188  Identities=13%  Similarity=0.048  Sum_probs=119.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhhcC---cchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhH
Q 045073          155 LLGTTSTWFLLDIAFYTINLAQKDIYPATG---IVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFI  231 (402)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~  231 (402)
                      +....+.++.............|.+.++++   .+..+.+         ..........++..+|.+++|+++||+|||+
T Consensus        24 ~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~   94 (432)
T PRK10406         24 IVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLL---------QTAGVFAAGFLMRPIGGWLFGRIADKHGRKK   94 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHhcCcHH
Confidence            334444455544555555556676666664   3332211         1122345556777799999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhh
Q 045073          232 IQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRST  311 (402)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~  311 (402)
                      .+..+.++.+++.++.++...+....              ......+.+..+..+.+..+..+...++++|.+|++.|+.
T Consensus        95 ~l~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~  160 (432)
T PRK10406         95 SMLISVCMMCFGSLVIACLPGYETIG--------------TWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGF  160 (432)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCchhHH--------------HHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccH
Confidence            99999988888887766532100000              0011234444445555555566778889999999999999


Q ss_pred             hhhHHHHHHHHhHHHHhHhHHhhhh--------ccCCcchhhHHHHHHHHHHHhhheeeeeccC
Q 045073          312 CHGISAAAGKAGAIVGAFGVQYYTQ--------KGDKQIKQSIITLAVVNFLGFLCSFMVPETN  367 (402)
Q Consensus       312 ~~~~~~~~~~~g~~i~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~  367 (402)
                      ..++.......|.++++.+...+..        ..  +|+.+|++.++..++...+...+||++
T Consensus       161 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~--gWr~~F~i~~~~~ll~~~~~~~~~e~~  222 (432)
T PRK10406        161 YASFQYVTLIGGQLLALLVVVVLQQTLEDAELREW--GWRIPFALGAVLAVVALWLRRQLDETS  222 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhcc--chHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence            9888877777777777655444321        23  899999987777766654433456653

>PRK15403 multidrug efflux system protein MdtM; Provisional

Probab=99.42  E-value=3.9e-12  Score=118.33  Aligned_cols=158  Identities=15%  Similarity=0.107  Sum_probs=115.2

Q ss_pred             hhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcc
Q 045073          175 AQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSL  254 (402)
Q Consensus       175 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~  254 (402)
                      -+|.+.++++.+....+.            ......++..++.++.|+++||+|||+++..+..+.+++.++....    
T Consensus        38 ~l~~i~~~~~~~~~~~~~------------~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a----  101 (413)
T PRK15403         38 GIINVVRDFNADVSLAPA------------SVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFT----  101 (413)
T ss_pred             CHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHc----
Confidence            345566678887776554            5566677788888899999999999999999888777776665542    


Q ss_pred             cCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhh
Q 045073          255 RGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYY  334 (402)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~  334 (402)
                                       .+ ...+.+..+..+.+.....+..+++..|.+|++.|+++.++......++..++|.+.+.+
T Consensus       102 -----------------~~-~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l  163 (413)
T PRK15403        102 -----------------TS-MTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAAL  163 (413)
T ss_pred             -----------------CC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                             22 223333333333322222334567788999999999999999999999999999998888


Q ss_pred             hhccCCcchhhHHHHHHHHHHHhhhee-eeeccCC
Q 045073          335 TQKGDKQIKQSIITLAVVNFLGFLCSF-MVPETNG  368 (402)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~~  368 (402)
                      .+..  +|++.|++.+++.++..+..+ .+||+++
T Consensus       164 ~~~~--gw~~~f~~~~~~~~i~~~~~~~~lp~~~~  196 (413)
T PRK15403        164 MHFV--HWKVLFAIIAVMGLIAFVGLLLAMPETVK  196 (413)
T ss_pred             HHhc--CHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence            8766  899999998888777766544 4588754

>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]

Probab=99.41  E-value=1.2e-13  Score=122.93  Aligned_cols=184  Identities=18%  Similarity=0.104  Sum_probs=144.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073          154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ  233 (402)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~  233 (402)
                      ....+++......+--|.+....+..-+.++.+++..++            +.....+..+++++++|++.||+.|++++
T Consensus        34 ~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gl------------l~~vf~v~~~i~sPl~gyLadryNR~~v~  101 (493)
T KOG1330|consen   34 TLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGL------------LQTVFIVVFMIASPLFGYLADRYNRKRVI  101 (493)
T ss_pred             HHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccc------------hhHHHHHHHHHHHHHHHHHHhhcCcceEE
Confidence            455555555555566666655556666668888887776            78888889999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073          234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH  313 (402)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~  313 (402)
                      .+|..+-.++.+..++.                      ...+.+.++..+.+.+-....++..++++|.+|...|+++.
T Consensus       102 ~vG~~iW~~Av~~~~fs----------------------~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~  159 (493)
T KOG1330|consen  102 AVGIFIWTLAVFASGFS----------------------NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVL  159 (493)
T ss_pred             eeHHHHHHHHHHHHHHH----------------------HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHH
Confidence            99998888888777774                      33455666666666667788889999999999999999999


Q ss_pred             hHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheee-eeccCCcccc
Q 045073          314 GISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFM-VPETNGLSLE  372 (402)
Q Consensus       314 ~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~-~~et~~~~~~  372 (402)
                      ++.+....+|..+|-.....+.+... .|++.|...+++.++..++.++ .+|.+++..+
T Consensus       160 ~ify~~ipvGsglG~vvgs~va~~~~-~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~  218 (493)
T KOG1330|consen  160 GIFYFAIPVGSGLGYVVGSVVASLTF-WWRWAFRGSAVLGVIVGLLVFLFVREPERGARD  218 (493)
T ss_pred             HHhhhhcccccceeEEeeeeeccCcc-ceEEEEEeehHHHHHHHHHHHhhccCccccccc
Confidence            99999999999999888888777764 4999999999999888777664 4555444333

>PRK05122 major facilitator superfamily transporter; Provisional

Probab=99.40  E-value=9.5e-12  Score=115.50  Aligned_cols=178  Identities=11%  Similarity=-0.036  Sum_probs=120.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhh-hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHH
Q 045073          154 HLLGTTSTWFLLDIAFYTINLAQKDIY-PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFII  232 (402)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~  232 (402)
                      .+.......+............+|.+. +++|.+..+.+.            ......++..++.++.|+++||+|||++
T Consensus        16 ~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~------------~~~~~~~~~~i~~~~~G~l~Dr~g~r~~   83 (399)
T PRK05122         16 RIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGL------------VISLQYLATLLSRPHAGRYADTLGPKKA   83 (399)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHH------------HHHHHHHHHHHhchhhHhHHhccCCcch
Confidence            344444555555555555666677755 568888887665            7777788888889999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhh
Q 045073          233 QLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTC  312 (402)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~  312 (402)
                      +..+.++.+++.+............              ......+++..+..+.+.....+....+..|.+|++.|+++
T Consensus        84 l~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~  149 (399)
T PRK05122         84 VVFGLCGCALSGLLYLLAGLLAAWP--------------VLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRV  149 (399)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhhccc--------------hhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccc
Confidence            9998877766655444322100000              01122333333343433444445566677899999999999


Q ss_pred             hhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhh
Q 045073          313 HGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLC  359 (402)
Q Consensus       313 ~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~  359 (402)
                      .++......+|..+++.+.+.+.+..  +|+..+++.+++.++..+.
T Consensus       150 ~~~~~~~~~~g~~~g~~l~~~l~~~~--g~~~~~~~~~~~~~~~~~~  194 (399)
T PRK05122        150 ISWNGIATYGALAIGAPLGVLLYHWG--GLAGLGLLIMLLALLGLLL  194 (399)
T ss_pred             hhhhhhhhhHHHHHHHHHHHHHHHcc--cHHHHHHHHHHHHHHHHHH
Confidence            99988888889999999998888876  8888777766655544433

>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]

Probab=99.40  E-value=4.8e-11  Score=104.90  Aligned_cols=275  Identities=13%  Similarity=0.007  Sum_probs=162.5

Q ss_pred             cchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCC-CCCchhHHHHHHhHHH
Q 045073            4 LSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQP-QGDYLWRIVLMFGAVP   82 (402)
Q Consensus         4 ~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Wr~~f~~~~i~   82 (402)
                      .+..|++...|++...+.+++.+...++|.+++|.++..+...-..  .+.   ..+...... .....||+++...+..
T Consensus       124 aaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~--~~~---~~~~~~~~~~~~~~~v~~pYl~~~~~  198 (422)
T COG0738         124 AANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVA--LTM---SAAQILAIKGADASSVQFPYLILAGL  198 (422)
T ss_pred             ccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhh--hcc---CHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence            4678999999999999999999999999999999999888631000  000   000000000 0122477788775544


Q ss_pred             HHHHHHHHh--hccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHH
Q 045073           83 AALTYYWRM--KMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTS  160 (402)
Q Consensus        83 ~~~~~~~~~--~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (402)
                      .++..+...  .+||.+.-      ..++.                      +.++...    ......+   .+....+
T Consensus       199 lvll~v~~~~~k~p~~~~~------~~~~~----------------------~~~~~~~----~~l~~~~---~~~~gvl  243 (422)
T COG0738         199 LVLLAVLILLSKLPDLQVA------APSLG----------------------ASGSAGL----SSLFQNK---HLRLGVL  243 (422)
T ss_pred             HHHHHHHHHhccCCcCCcc------ccccc----------------------ccccchH----HHHHhCh---HHHHHHH
Confidence            444433332  23432110      00000                      0000000    1111222   3344444


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHH
Q 045073          161 TWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL  239 (402)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~  239 (402)
                      ..|++...-.+...|++.++.+ .|.+..++..            ..+..+.+.++|++++.++..|+...+.+.+..++
T Consensus       244 ~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~------------~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~  311 (422)
T COG0738         244 AIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAY------------YLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALI  311 (422)
T ss_pred             HHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            4444444555666778888877 6777665554            78888899999999999999999998888877655


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH
Q 045073          240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA  319 (402)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~  319 (402)
                      ..+.++...+.                     ++.+....+ . ..+.+....+|+.++...+..| ++-+.+ |.....
T Consensus       312 ~ill~~~~~l~---------------------~g~v~~~~l-~-~ig~F~simfPTIfslal~~l~-~~ts~~-s~~l~m  366 (422)
T COG0738         312 AILLLLAVALI---------------------GGVVALYAL-F-LIGLFNSIMFPTIFSLALKNLG-EHTSVG-SGLLVM  366 (422)
T ss_pred             HHHHHHHHHHh---------------------cChHHHHHH-H-HHHHHhHHHHHHHHHHHHhccC-cccccc-ceeeee
Confidence            55544444443                     222222222 2 2233355667889999999999 333333 444456


Q ss_pred             HHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHh
Q 045073          320 GKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGF  357 (402)
Q Consensus       320 ~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  357 (402)
                      ..+|+++.|.+.|++.|..  +....+.+...+|.+..
T Consensus       367 aivGGAiiP~l~G~i~d~~--g~~~~~~~~pllc~lyV  402 (422)
T COG0738         367 AIVGGAIIPPLQGVIADMF--GIQLTFLIVPLLCYLYV  402 (422)
T ss_pred             heecchHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHH
Confidence            6689999999999999987  55555544444444333

>PRK12382 putative transporter; Provisional

Probab=99.40  E-value=7.2e-12  Score=116.01  Aligned_cols=173  Identities=13%  Similarity=-0.024  Sum_probs=112.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhh-hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073          155 LLGTTSTWFLLDIAFYTINLAQKDIY-PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ  233 (402)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~  233 (402)
                      ++...+..+............+|.++ +++|.+..+.+.            ......+...++.++.|+++||+|||+.+
T Consensus        17 ~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~------------~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l   84 (392)
T PRK12382         17 LFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGI------------AVGIQFLATVLTRGYAGRLADQYGAKRSA   84 (392)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHH------------HHHHHHHHHHHHhhhhhHHHHhhcchHHH
Confidence            33344444444444445555666654 678998887665            77778888888999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073          234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH  313 (402)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~  313 (402)
                      ..+.+...++.+............              ......+.+.....+.+.....+...++..|.+|++.|+++.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~  150 (392)
T PRK12382         85 LQGMLACGLAGLAYLLAAILPVSA--------------PFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVM  150 (392)
T ss_pred             HHHHHHHHHHHHHHHhhhccccch--------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhh
Confidence            988776655543322221100000              112233333333333333333344556778999999999999


Q ss_pred             hHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHH
Q 045073          314 GISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFL  355 (402)
Q Consensus       314 ~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  355 (402)
                      ++......++..++|.+.+.+.+..  +|+..+.+..+..++
T Consensus       151 ~~~~~~~~~g~~~g~~~~~~l~~~~--g~~~~~~~~~~~~~~  190 (392)
T PRK12382        151 SWNGMAMYGALAAGAPLGLLLHSHF--GFAALALTTMVLPLL  190 (392)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcc--ChHHHHHHHHHHHHH
Confidence            9999888899999999988887766  787766655444333

>PRK11102 bicyclomycin/multidrug efflux system; Provisional

Probab=99.40  E-value=3.6e-12  Score=117.39  Aligned_cols=161  Identities=16%  Similarity=0.109  Sum_probs=120.3

Q ss_pred             HHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHH
Q 045073          171 TINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGAR  250 (402)
Q Consensus       171 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~  250 (402)
                      ......|.+.+++|.++.+.+.            ......++..++.++.|+++||+|||+.+..+.++.+++.+.+...
T Consensus         9 ~~~p~~~~~~~~~~~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~   76 (377)
T PRK11102          9 MYLPALPVIAADFGVSAGSVQM------------TLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA   76 (377)
T ss_pred             HHhccHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHH
Confidence            3345667888889998887665            6677778888899999999999999999999988887777766553


Q ss_pred             hhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHh
Q 045073          251 YDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFG  330 (402)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~  330 (402)
                                           .+. ....+.....+.+.....+...++..|.+|++.|+++.++.+....+|..++|.+
T Consensus        77 ---------------------~~~-~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  134 (377)
T PRK11102         77 ---------------------QTI-DQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPII  134 (377)
T ss_pred             ---------------------ccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                                 222 2222233333333333344566788999999999999999999999999999999


Q ss_pred             HHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeeccC
Q 045073          331 VQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPETN  367 (402)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~  367 (402)
                      .+.+.+..  +|+..|++.+++.++..++.. ++||++
T Consensus       135 ~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (377)
T PRK11102        135 GGWLLVWF--SWHAIFWVLALAAILAAALVFFFIPETL  170 (377)
T ss_pred             HHHHHHHc--ChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence            99888876  899999888877776655543 456654

>PRK09556 uhpT sugar phosphate antiporter; Reviewed

Probab=99.39  E-value=4.8e-12  Score=119.85  Aligned_cols=178  Identities=15%  Similarity=0.058  Sum_probs=121.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHH
Q 045073          155 LLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQL  234 (402)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~  234 (402)
                      +...++.++.....-.......|.+.+++|.+..+.+.            ......++..++.++.|+++||+|||+++.
T Consensus        31 ~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~------------~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~   98 (467)
T PRK09556         31 YLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGM------------IGLGFSITYGVGKTLVGYYADGKNTKQFLP   98 (467)
T ss_pred             HHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHhhhhhHhhccCccchHH
Confidence            33334444443334444555678888899999887665            666777888888899999999999999998


Q ss_pred             HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhh
Q 045073          235 GGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHG  314 (402)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~  314 (402)
                      .+.++.++..+.++......                 ......+.+.....+.+.....+....+++|.+|++.|+++.|
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~g  161 (467)
T PRK09556         99 FLLILSAICMLGFGASLGSG-----------------SVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLG  161 (467)
T ss_pred             HHHHHHHHHHHHHHHHHhcc-----------------cchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEE
Confidence            88877777766665532111                 1223333334444444444445677788999999999999999


Q ss_pred             HHHHHHHHhHHHHhHhHHhhhhcc-CCcchhhHHHHHHHHHHHhhhee
Q 045073          315 ISAAAGKAGAIVGAFGVQYYTQKG-DKQIKQSIITLAVVNFLGFLCSF  361 (402)
Q Consensus       315 ~~~~~~~~g~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~i~~~  361 (402)
                      +......+|.++++.+........ ..+|+..|.+.+++.++..++.+
T Consensus       162 i~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~  209 (467)
T PRK09556        162 FWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGL  209 (467)
T ss_pred             eeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHH
Confidence            999999999999988776655432 11477777776766655444433

>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter

Probab=99.39  E-value=6.8e-12  Score=118.87  Aligned_cols=137  Identities=12%  Similarity=0.044  Sum_probs=106.0

Q ss_pred             HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073          205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT  284 (402)
Q Consensus       205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (402)
                      ......++.+++.++.|+++||+|||+.+..+.++.+++.++......                    ......++..+.
T Consensus        81 ~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~--------------------~~~~~l~~~r~~  140 (465)
T TIGR00894        81 ILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAG--------------------GGIALVVFCRVI  140 (465)
T ss_pred             HHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHH--------------------cCchHHHHHHHH
Confidence            677778888999999999999999999999888777776655443211                    112234444455


Q ss_pred             HHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhc-cCCcchhhHHHHHHHHHHHhhheeee
Q 045073          285 LFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQK-GDKQIKQSIITLAVVNFLGFLCSFMV  363 (402)
Q Consensus       285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~i~~~~~  363 (402)
                      .+.+.....+....+++|.+|++.|+++.++......+|.++++.+.+.+.+. .  +|+.+|++.+++.++..++.+++
T Consensus       141 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~--gw~~~f~i~~~~~~~~~~~~~~~  218 (465)
T TIGR00894       141 QGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWG--GWPMIFYVFGIVGCAWSLLWFVF  218 (465)
T ss_pred             HHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCCeehhhhhHHHHHHHHHHHHH
Confidence            55555666677788999999999999999999999999999999999988776 4  89999999888877666555544

>PRK09874 drug efflux system protein MdtG; Provisional

Probab=99.38  E-value=1.8e-11  Score=113.98  Aligned_cols=176  Identities=22%  Similarity=0.230  Sum_probs=122.1

Q ss_pred             HHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHH
Q 045073          159 TSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFL  238 (402)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~  238 (402)
                      .+..+...........++|.+.+++|.+..+...       ...+.......+...++.++.|+++||+|||+.+..+.+
T Consensus        20 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~-------~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~   92 (408)
T PRK09874         20 WLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALN-------MWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSAL   92 (408)
T ss_pred             HHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHH-------HHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHH
Confidence            3344444556666677889998888887553210       012236667777888888999999999999999998887


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHH
Q 045073          239 LMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAA  318 (402)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~  318 (402)
                      ..+++.+++...                     .+. ....+.....+.. .+..+....+..+.+|++.|+.+.++...
T Consensus        93 ~~~~~~~~~~~~---------------------~~~-~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (408)
T PRK09874         93 GMGIVMVLMGLA---------------------QNI-WQFLILRALLGLL-GGFVPNANALIATQVPRNKSGWALGTLST  149 (408)
T ss_pred             HHHHHHHHHHHH---------------------hhH-HHHHHHHHHHHHh-hhhHHhHHHHHHHhcCHhhhhHHHHHHHH
Confidence            777766655442                     122 2222222222222 23345556677889999999999999999


Q ss_pred             HHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheee-eecc
Q 045073          319 AGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFM-VPET  366 (402)
Q Consensus       319 ~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~-~~et  366 (402)
                      ...+|..++|.+.+.+.+..  +|+..+++.+++.++..+..++ +||.
T Consensus       150 ~~~~g~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (408)
T PRK09874        150 GGVSGALLGPLAGGLLADSY--GLRPVFFITASVLFLCFLVTLFCIREN  196 (408)
T ss_pred             HHHHHHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            99999999999999888766  8899998888877766655443 3554

>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator)

Probab=99.37  E-value=1.3e-11  Score=113.09  Aligned_cols=177  Identities=19%  Similarity=0.173  Sum_probs=118.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhh-hhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHH
Q 045073          156 LGTTSTWFLLDIAFYTINLAQKD-IYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQL  234 (402)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~  234 (402)
                      +..++..+......+....+.|. +.+++|+++.+.+.            ......++..++.++.|+++||+|||+.+.
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~   71 (366)
T TIGR00886         4 FFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGN------------LVAVPVLAGAVLRIILGFLVDKFGPRYTTT   71 (366)
T ss_pred             HHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhH------------hhHHHHHHHHHHHHHHHHHHHHhCchHHHH
Confidence            34455555555667777778885 66789999887665            777788888999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhh
Q 045073          235 GGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHG  314 (402)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~  314 (402)
                      .+.++..++.+++...                     ......+.+..+..+... +..+....+++|.+|++.|+++.+
T Consensus        72 ~~~~~~~i~~~~~~~~---------------------~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~r~~~~~  129 (366)
T TIGR00886        72 LSLLLLAIPCLWAGLA---------------------VQSYSVLLLLRLFIGIAG-GSFASCMPWISFFFPKKIQGTALG  129 (366)
T ss_pred             HHHHHHHHHHHHHHHH---------------------hhhHHHHHHHHHHHHHhc-hhhHhHHHHHHHhcCHhhhhHHHH
Confidence            9988888877766653                     101222333333333322 233445678899999999999999


Q ss_pred             HHHHHHHHhHHHHhHhHHhhhhcc--------CCcchhhH-HHHHHHHHHHhhhe-eeeecc
Q 045073          315 ISAAAGKAGAIVGAFGVQYYTQKG--------DKQIKQSI-ITLAVVNFLGFLCS-FMVPET  366 (402)
Q Consensus       315 ~~~~~~~~g~~i~~~~~~~~~~~~--------~~~~~~~~-~~~~~~~~i~~i~~-~~~~et  366 (402)
                      +......+|..+++.+.+.+....        ..+|++.+ ...+++..+..++. .+.+|+
T Consensus       130 ~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (366)
T TIGR00886       130 LAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADT  191 (366)
T ss_pred             HHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccC
Confidence            999888888887777766554321        01678777 43344443333332 333443

>TIGR00890 2A0111 Oxalate/Formate Antiporter

Probab=99.36  E-value=3.7e-12  Score=117.11  Aligned_cols=157  Identities=14%  Similarity=0.087  Sum_probs=112.7

Q ss_pred             HHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 045073          168 AFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAIL  247 (402)
Q Consensus       168 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~  247 (402)
                      ..+....+.|.+.+++|.+..+.+.            ......++..++.++.|+++||+|||+.+..+.++.+++.+..
T Consensus        18 ~~~~~~~~~~~~~~~~~~s~~~~g~------------~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~   85 (377)
T TIGR00890        18 YVYTWTLLAPPLGRYFGVGVTAVAI------------WFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFY   85 (377)
T ss_pred             HHhhhhhHHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHH
Confidence            3566777889999999999887665            7778888889999999999999999999999988888877666


Q ss_pred             HHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHH
Q 045073          248 GARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVG  327 (402)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~  327 (402)
                      ...                     .+. ..+.+.....+.+.....+.......|.+| +.|+++.++......+|..++
T Consensus        86 ~~~---------------------~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~  142 (377)
T TIGR00890        86 AIA---------------------DSL-AALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFIL  142 (377)
T ss_pred             HHH---------------------HHH-HHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHH
Confidence            653                     122 222222222222222222334445677777 569999999998888888776


Q ss_pred             hHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee
Q 045073          328 AFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF  361 (402)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~  361 (402)
                      +.+.+...+..  +|++.|.+.+++.++..+..+
T Consensus       143 ~~~~~~~~~~~--~~~~~f~~~~~~~~~~~~~~~  174 (377)
T TIGR00890       143 SPLITSVINLE--GVPAAFIYMGIIFLLVIVLGA  174 (377)
T ss_pred             HHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHH
Confidence            66666665554  899999988888777655544

>PRK10642 proline/glycine betaine transporter; Provisional

Probab=99.36  E-value=2.6e-11  Score=115.44  Aligned_cols=189  Identities=17%  Similarity=0.083  Sum_probs=120.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhh-hhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHH
Q 045073          154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAA-AMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFII  232 (402)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~  232 (402)
                      .++...+.++....-+.......|.+-+++..+.... +.       ...........++..+|.++.|+++||+|||++
T Consensus        17 ~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~   89 (490)
T PRK10642         17 AITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQM-------IAALATFSVPFLIRPLGGLFFGMLGDKYGRQKI   89 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHH
Confidence            3444444555444444444455565555553322111 10       011112456667888999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchH--HHHHHHHHHHHHHhhCCccccccccccccccchhh
Q 045073          233 QLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHA--WFMILYGLTLFFANFGPNSTTFIVPAELFPARLRS  310 (402)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~  310 (402)
                      +..+.++.+++.++.++...+..                ...+  ..+++..+..+++..+..+...++++|.+|++.|+
T Consensus        90 l~~~~~l~~i~~~~~a~~~~~~~----------------~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg  153 (490)
T PRK10642         90 LAITIVIMSISTFCIGLIPSYAT----------------IGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRG  153 (490)
T ss_pred             HHHHHHHHHHHHHHHHhcccHHH----------------HHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCc
Confidence            99999999888888776421000                0000  12344445555555666677888999999999999


Q ss_pred             hhhhHHHHHHHHhHHHHhHhHHhhhh--------ccCCcchhhHHHHHHHHHHHhhheeeeeccC
Q 045073          311 TCHGISAAAGKAGAIVGAFGVQYYTQ--------KGDKQIKQSIITLAVVNFLGFLCSFMVPETN  367 (402)
Q Consensus       311 ~~~~~~~~~~~~g~~i~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~  367 (402)
                      ...++......+|..+++.+...+..        ..  +|++.|++.+++.+++.++...+||+.
T Consensus       154 ~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~--gWR~~f~i~~~~~l~~~~~~~~~~esp  216 (490)
T PRK10642        154 FMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDW--GWRIPFFIALPLGIIGLYLRHALEETP  216 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCc--cHHHHHHHHHHHHHHHHHHHHcCCCCh
Confidence            99999887777777777755443321        23  899999987766665555544567763

>PRK09584 tppB putative tripeptide transporter permease; Reviewed

Probab=99.36  E-value=6.7e-11  Score=112.49  Aligned_cols=131  Identities=11%  Similarity=-0.013  Sum_probs=78.3

Q ss_pred             hhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccc
Q 045073          218 WFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTF  297 (402)
Q Consensus       218 ~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (402)
                      .+.+++.+|++.++.+.+++++.+++++.+..........+            ..+.+ +.+......+.+.....|...
T Consensus       338 ~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~------------~vs~~-~~~~~~~l~~~ge~~~~p~g~  404 (500)
T PRK09584        338 AIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAG------------IVSVN-WLIASYGLQSIGELMISGLGL  404 (500)
T ss_pred             HHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCC------------ccCHH-HHHHHHHHHHHHHHHHhHHHH
Confidence            34466666766667788888888888877666433211110            01222 333333344444566667888


Q ss_pred             cccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhh------ccC--CcchhhHHHHHHHHHHHhhhee
Q 045073          298 IVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQ------KGD--KQIKQSIITLAVVNFLGFLCSF  361 (402)
Q Consensus       298 ~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~------~~~--~~~~~~~~~~~~~~~i~~i~~~  361 (402)
                      .++.+..|++.||+.+|+......+|..++..+......      ...  .++...|...++..++..++.+
T Consensus       405 s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~  476 (500)
T PRK09584        405 AMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLML  476 (500)
T ss_pred             HHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence            889999999999999998876666666666555432210      000  0255677777766554444433

>PRK11646 multidrug resistance protein MdtH; Provisional

Probab=99.36  E-value=1.7e-11  Score=113.58  Aligned_cols=165  Identities=16%  Similarity=0.165  Sum_probs=117.4

Q ss_pred             HHHHHHHHHHhhhhhhh-hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHH
Q 045073          164 LLDIAFYTINLAQKDIY-PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSI  242 (402)
Q Consensus       164 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~  242 (402)
                      ....+.+....+.+.++ ++.|++....+.            ......+...+..++.|+++||+|||+.+..+..+.++
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl------------~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~   88 (400)
T PRK11646         21 LVVLGFFVVFPLISIRFVDQLGWAAVMVGI------------ALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAA   88 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCcHHHHHH------------HHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHH
Confidence            33344455555666554 568998887665            55666667777778999999999999999999888888


Q ss_pred             HHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHH
Q 045073          243 CMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKA  322 (402)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~  322 (402)
                      +.+.+...                     .+. +.+.+.....+.......+...+++.|.+|++.|+++.|+......+
T Consensus        89 ~~~~~~~~---------------------~~~-~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~  146 (400)
T PRK11646         89 GFATMAIA---------------------HEP-WLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSA  146 (400)
T ss_pred             HHHHHHHh---------------------ccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence            77766542                     222 22333333333333334455667789999999999999999999999


Q ss_pred             hHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeec
Q 045073          323 GAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPE  365 (402)
Q Consensus       323 g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~e  365 (402)
                      |..++|.+.+.+.+ .  +|+..|++.+++.++..++.. +.||
T Consensus       147 g~~ig~~l~g~l~~-~--g~~~~f~~~~~~~~~~~i~~~~~~~~  187 (400)
T PRK11646        147 GAVIGALLGSWLLQ-Y--DFRLVCATGAVLFVLAAAFNAWLLPA  187 (400)
T ss_pred             HHHHHHHHHHHHHH-h--hHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            99999999998884 4  899999888777666554433 3455

>TIGR00892 2A0113 monocarboxylate transporter 1

Probab=99.35  E-value=1.2e-11  Score=116.53  Aligned_cols=158  Identities=16%  Similarity=0.113  Sum_probs=111.1

Q ss_pred             HHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q 045073          170 YTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGA  249 (402)
Q Consensus       170 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~  249 (402)
                      +....+.|.+.+++|.+..+.+.            ......++..++.++.|+++||+|||+.++.+.++.+++.++.+.
T Consensus        36 ~~~~~~~~~i~~~~g~s~~~~~~------------~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~  103 (455)
T TIGR00892        36 KAVTVFFKELQQIFQATYSETAW------------ISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASF  103 (455)
T ss_pred             cchhhhHHHHHHHhCcchhHHHH------------HHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHH
Confidence            44566778888899998887655            445555566677788999999999999999888777776666554


Q ss_pred             HhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhH
Q 045073          250 RYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAF  329 (402)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~  329 (402)
                      .                     .+.+.......+..+.+.....+....++.+.+| +.|+++.|+.+....+|..++|.
T Consensus       104 ~---------------------~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~  161 (455)
T TIGR00892       104 S---------------------SNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAP  161 (455)
T ss_pred             h---------------------hhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHH
Confidence            3                     1112222222222222222222344556678886 78999999999999999999999


Q ss_pred             hHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073          330 GVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV  363 (402)
Q Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~  363 (402)
                      +.+.+.+..  +|+++|++.+++.++..+..+++
T Consensus       162 l~~~l~~~~--gwr~~f~~~~~~~~~~~v~~~~~  193 (455)
T TIGR00892       162 LNQYLFESF--GWRGSFLILGGLLLHCCVCGALM  193 (455)
T ss_pred             HHHHHHHHh--ChHHHHHHHHHHHHHHHHHHHHh
Confidence            999888877  89999999888777665544433

>PRK11043 putative transporter; Provisional

Probab=99.35  E-value=2.4e-11  Score=112.92  Aligned_cols=155  Identities=14%  Similarity=0.048  Sum_probs=111.2

Q ss_pred             hhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcc
Q 045073          175 AQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSL  254 (402)
Q Consensus       175 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~  254 (402)
                      ..|.+.+++|.++.+.+.            ......++..++.++.|+++||+|||+.+..+..+..++.+.....    
T Consensus        28 ~~~~i~~~~~~s~~~~g~------------~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~----   91 (401)
T PRK11043         28 AFKAIQADLQTSASAVSA------------SLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWV----   91 (401)
T ss_pred             hHHHHHHHHCCCHHHHHH------------HHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHh----
Confidence            345556788988887665            6777788888999999999999999999998887777666555442    


Q ss_pred             cCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhh
Q 045073          255 RGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYY  334 (402)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~  334 (402)
                                       .+.+.+ .+.....+.+.....+...++..|.+|++.++...+..+....++..++|.+.+.+
T Consensus        92 -----------------~~~~~l-~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l  153 (401)
T PRK11043         92 -----------------ESAAQL-LVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWL  153 (401)
T ss_pred             -----------------cCHHHH-HHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                             222222 22222222222222233456678999999899888888888889999999999998


Q ss_pred             hhccCCcchhhHHHHHHHHHHHhhheeeeec
Q 045073          335 TQKGDKQIKQSIITLAVVNFLGFLCSFMVPE  365 (402)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~e  365 (402)
                      .+..  +|+..|++.+++.++..+..++++|
T Consensus       154 ~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~  182 (401)
T PRK11043        154 LNHF--GWQAIFATLFAITLLLILPTLRLKP  182 (401)
T ss_pred             HhcC--ChHHHHHHHHHHHHHHHHHHHHcCC
Confidence            8877  8999998888777776665555544

>PRK11195 lysophospholipid transporter LplT; Provisional

Probab=99.35  E-value=1.7e-11  Score=113.28  Aligned_cols=154  Identities=10%  Similarity=0.051  Sum_probs=110.0

Q ss_pred             hhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhc
Q 045073          174 LAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDS  253 (402)
Q Consensus       174 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~  253 (402)
                      ...+.+..+.+.+....+.            ......+...+..++.|+++||+|||++++.+..+.+++.+.+...   
T Consensus        24 ~~~~~~~~~~~~s~~~~~~------------~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~---   88 (393)
T PRK11195         24 FAAIALLKELHYPDWSQPL------------LQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFG---   88 (393)
T ss_pred             HHHHHHHHHcCCcHHHHHH------------HHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHH---
Confidence            3344456677777665444            5666777788888899999999999999999988877766554432   


Q ss_pred             ccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHh
Q 045073          254 LRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQY  333 (402)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~  333 (402)
                                        .+.    .+..+..+.+.....|...+++.|++|++.|+++.|+......++.++||.+.+.
T Consensus        89 ------------------~~~----~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~  146 (393)
T PRK11195         89 ------------------IHP----LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGA  146 (393)
T ss_pred             ------------------HHH----HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                              111    1222333444455667888899999999999999999999999999999999999


Q ss_pred             hhhccCCcchhhHHHHHHHHHHHhhheeeeeccC
Q 045073          334 YTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETN  367 (402)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~  367 (402)
                      +.+.   .+...+.+.+.+.+++.+....+||.+
T Consensus       147 l~~~---~~~~~~~i~~~~~~~~~~~~~~l~~~~  177 (393)
T PRK11195        147 LADP---HAEAALAVCALIYLLAALFNLFIPRLG  177 (393)
T ss_pred             HHHH---HHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence            9875   455566655555454544444567654

>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []

Probab=99.35  E-value=4.2e-11  Score=108.05  Aligned_cols=182  Identities=15%  Similarity=0.096  Sum_probs=115.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073          154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ  233 (402)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~  233 (402)
                      .++...+........++......+.|+..+.-+......        .-+...+...+..++...+..++.+|+|.|+.+
T Consensus       221 ~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~--------~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~L  292 (412)
T PF01306_consen  221 NFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQ--------MYGYLWSVQVFLEALMMFFSPWLINRIGAKNLL  292 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChh--------HHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHH
Confidence            344444444444344555544445555443222211111        233367777888888888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073          234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH  313 (402)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~  313 (402)
                      +++..++.+=.+..++.                     .+. +.+.+.-..-+.-........+-|+++.+|++..++..
T Consensus       293 llag~i~~iRi~~~~~~---------------------~~~-~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y  350 (412)
T PF01306_consen  293 LLAGVIMAIRIIGSGFA---------------------TNP-WVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLY  350 (412)
T ss_dssp             HHHHHHHHHHHHHHHT-----------------------SH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHH
T ss_pred             HHHHHHHHHHHHHHhhh---------------------cch-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHH
Confidence            99887777766665553                     222 33333333333222122234566889999999999998


Q ss_pred             hHH-HHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee-eccC
Q 045073          314 GIS-AAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV-PETN  367 (402)
Q Consensus       314 ~~~-~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~-~et~  367 (402)
                      .+. +....++.++.+.+.|.+.|+.  |++.+|++.+.+.++..++..+. ++.+
T Consensus       351 ~v~~~~~~~~~~~i~s~~~G~lyd~~--G~~~tylimg~iv~~~~li~~f~l~~~~  404 (412)
T PF01306_consen  351 LVGFQFAKQIGIIILSPLAGYLYDRI--GFQHTYLIMGLIVLPFTLISAFTLKKDK  404 (412)
T ss_dssp             HHHHTTTHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHS--SS
T ss_pred             HHHHHHHHHHHHHHHhhhHHhhHhhc--CcHHHHHHHHHHHHHHHHHheeeecCCC
Confidence            885 5677789999999999999998  88889988888877766666654 4433

The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.

>PRK09584 tppB putative tripeptide transporter permease; Reviewed

Probab=99.34  E-value=5e-11  Score=113.35  Aligned_cols=170  Identities=10%  Similarity=0.028  Sum_probs=115.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhh-hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhc-cchhH
Q 045073          154 HLLGTTSTWFLLDIAFYTINLAQKDIY-PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDR-IGRFI  231 (402)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~grr~  231 (402)
                      .++..++..+.....+|+...+++.++ +++|++..+...            .............+++|+++|| +|||+
T Consensus        22 ~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~------------~~~~~~~~~~~~~~~~G~LaDr~~G~r~   89 (500)
T PRK09584         22 AFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSIT------------LFSSFSALVYGLVAIGGWLGDKVLGTKR   89 (500)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHhccchHH
Confidence            456666677777788888888898888 568888776433            2222222223333578999999 59999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccch--h
Q 045073          232 IQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARL--R  309 (402)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~--r  309 (402)
                      .+..+.++.+++..++.+.                     .+....+.+.....+.+.....+...++..|.+|++.  |
T Consensus        90 ~~~~g~~~~~ig~~l~~~~---------------------~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~  148 (500)
T PRK09584         90 VIMLGAIVLAIGYALVAWS---------------------GHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRL  148 (500)
T ss_pred             HHHHHHHHHHHHHHHHHHh---------------------cccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhh
Confidence            9999988888776665542                     1111222222222233333344556678899998643  4


Q ss_pred             hhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhh
Q 045073          310 STCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFL  358 (402)
Q Consensus       310 ~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i  358 (402)
                      +.+.++.+...++|.+++|.+.+++.+..  +|+..|.+.++..+++.+
T Consensus       149 ~~~~~~~~~~~~iG~~~gp~i~g~l~~~~--g~~~~F~i~~i~~~i~~i  195 (500)
T PRK09584        149 DGAFTMYYMSINIGSFFSMLATPWLAAKY--GWSVAFALSVVGMLITVV  195 (500)
T ss_pred             hhcchHHHHHHHHHHHHHHHHHHHHHHhh--CHHHHHHHHHHHHHHHHH
Confidence            56788889999999999999999998877  899999887765555443

>PRK10489 enterobactin exporter EntS; Provisional

Probab=99.34  E-value=1.2e-11  Score=115.43  Aligned_cols=172  Identities=12%  Similarity=-0.037  Sum_probs=118.5

Q ss_pred             HHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHH
Q 045073          165 LDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICM  244 (402)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~  244 (402)
                      ............|.+.++.+.++.+.+.            ......++.+++.++.|+++||+|||+++..+..+.+++.
T Consensus        29 ~~~~~~~~~~~~~~~~~~~~~s~~~~g~------------~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~   96 (417)
T PRK10489         29 SIFGLGLLGVAVPVQIQMMTGSTLQVGL------------SVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGF   96 (417)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCHHHHHH------------HHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHH
Confidence            3334445555678887777777766555            7777888888999999999999999999888777666665


Q ss_pred             HHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhH
Q 045073          245 AILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGA  324 (402)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~  324 (402)
                      +.+...... .                .+......+..+..+.+.....+...++..|..|++.|+++.++......+|.
T Consensus        97 ~~~~~~~~~-~----------------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  159 (417)
T PRK10489         97 IGLALNAFL-P----------------EPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGS  159 (417)
T ss_pred             HHHHHHHHc-C----------------CCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHH
Confidence            554432111 0                11122222222222222222234456678899999999999999999999999


Q ss_pred             HHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeeccC
Q 045073          325 IVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETN  367 (402)
Q Consensus       325 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~  367 (402)
                      .+||.+.+.+.+..  +|++.+.+.++..++..++.+.+|+++
T Consensus       160 ~~g~~l~g~l~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~  200 (417)
T PRK10489        160 VISPALGGLLIAAG--GVAWNYGLAAAGTFITLLPLLRLPALP  200 (417)
T ss_pred             HhHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence            99999999888766  788888887777776666655666653

>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

Probab=99.34  E-value=1.4e-11  Score=111.99  Aligned_cols=166  Identities=19%  Similarity=0.238  Sum_probs=126.2

Q ss_pred             HHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHH
Q 045073          160 STWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL  239 (402)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~  239 (402)
                      ...+......+......|.+.++.|.+..+.+.            ......++..++.++.|+++||+|||+.+..+..+
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~   73 (352)
T cd06174           6 LGFFLSGLDRGLLSPALPLLAEDLGLSASQAGL------------IVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLL   73 (352)
T ss_pred             HHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHH
Confidence            334445556666777778888888888776555            67777888889999999999999999999999888


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH
Q 045073          240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA  319 (402)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~  319 (402)
                      ..++.+.....                     .+ .....+.....+.......+...++..|.+|++.|+++.++....
T Consensus        74 ~~~~~~~~~~~---------------------~~-~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (352)
T cd06174          74 FALGSLLLAFA---------------------SS-LWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAG  131 (352)
T ss_pred             HHHHHHHHHHh---------------------cc-HHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHH
Confidence            88877766653                     11 233333334444434445567778899999999999999999999


Q ss_pred             HHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee
Q 045073          320 GKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF  361 (402)
Q Consensus       320 ~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~  361 (402)
                      ..+|..+++.+.+.+.+..  +|+..+.+.+++.++..+...
T Consensus       132 ~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  171 (352)
T cd06174         132 FGLGALLGPLLGGLLAESL--GWRWLFLILAILGLLLALLLL  171 (352)
T ss_pred             HHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998876  788888887777666655443

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3

>PF03825 Nuc_H_symport: Nucleoside H+ symporter

Probab=99.34  E-value=8.7e-11  Score=107.73  Aligned_cols=167  Identities=11%  Similarity=0.113  Sum_probs=107.2

Q ss_pred             HHHHHHhhhhhhhhhcC-cchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHH
Q 045073          168 AFYTINLAQKDIYPATG-IVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAI  246 (402)
Q Consensus       168 ~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~  246 (402)
                      ..-....|.+.++++.| .+....+.            ...+..++.++.-...+++..|+|.|+++.++.+..++=..+
T Consensus       222 ~~~~~~~f~~~yl~~~gg~~~~~~g~------------~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l  289 (400)
T PF03825_consen  222 SHAAYYTFFSIYLQELGGYSGSTIGI------------LWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLL  289 (400)
T ss_pred             HHHHHHHHHHHHHHHcccchhhHHHH------------HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence            33344456677888887 55554332            556777888888889999999999999999988777666665


Q ss_pred             HHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHH---HHHHHHhhCCccccccccccccccchhhhhhhHHHHH-HHH
Q 045073          247 LGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYG---LTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA-GKA  322 (402)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~-~~~  322 (402)
                      .+...                    .+.+....+..   ..-+............++.+..|++.|+++.++.... ..+
T Consensus       290 ~a~~~--------------------~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Gl  349 (400)
T PF03825_consen  290 YAYFS--------------------DPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGL  349 (400)
T ss_pred             HHHhc--------------------CCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhH
Confidence            55531                    11111111111   1122211222335667889999999999999998876 458


Q ss_pred             hHHHHhHhHHhhhhccCC----cchhhHHHHHHHHHHHhhheee-eecc
Q 045073          323 GAIVGAFGVQYYTQKGDK----QIKQSIITLAVVNFLGFLCSFM-VPET  366 (402)
Q Consensus       323 g~~i~~~~~~~~~~~~~~----~~~~~~~~~~~~~~i~~i~~~~-~~et  366 (402)
                      |..+|.++.|++.+..+.    .+...+.+.+++.++..++.++ .+|+
T Consensus       350 g~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~  398 (400)
T PF03825_consen  350 GGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPK  398 (400)
T ss_pred             HHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence            999999999999998732    2234455555555555444443 3443

>PRK09848 glucuronide transporter; Provisional

Probab=99.33  E-value=1.9e-10  Score=108.50  Aligned_cols=149  Identities=10%  Similarity=-0.041  Sum_probs=90.5

Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHH
Q 045073          158 TTSTWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGG  236 (402)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~  236 (402)
                      .....+.....++......|.++++ +|.++....            .......++.+++.++.+++.||+|+|+.+..+
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~------------~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g  300 (448)
T PRK09848        233 LCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTV------------LVLVQNLVGTVASAPLVPGMVARIGKKNTFLIG  300 (448)
T ss_pred             HHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence            3333333334444444556666654 554433211            133334556777888999999999999999988


Q ss_pred             HHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccc-------hh
Q 045073          237 FLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPAR-------LR  309 (402)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~-------~r  309 (402)
                      .++..++.+.+.+.    .                ....+.........+.+.....+..+++.+|..|.+       .+
T Consensus       301 ~~~~~i~~~~~~~~----~----------------~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~  360 (448)
T PRK09848        301 ALLGTCGYLLFFWV----S----------------VWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIE  360 (448)
T ss_pred             HHHHHHHHHHHHHc----C----------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccch
Confidence            87776665554431    0                111222222222222233334455667777777643       45


Q ss_pred             hhhhhHHHHHHHHhHHHHhHhHHhhhhcc
Q 045073          310 STCHGISAAAGKAGAIVGAFGVQYYTQKG  338 (402)
Q Consensus       310 ~~~~~~~~~~~~~g~~i~~~~~~~~~~~~  338 (402)
                      |...|+.+....+|..+++.+.+.+.+..
T Consensus       361 G~~~~~~~~~~klg~aig~~i~g~~l~~~  389 (448)
T PRK09848        361 GLTYSLFSFTRKCGQAIGGSIPAFILGLS  389 (448)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            88899999999999999998888876654

>PRK15075 citrate-proton symporter; Provisional

Probab=99.33  E-value=4.8e-11  Score=112.00  Aligned_cols=177  Identities=14%  Similarity=0.036  Sum_probs=112.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073          154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ  233 (402)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~  233 (402)
                      .....++.++.............|.+.++++.++.+.+.      ...+........+...++.++.|++.||+|||+.+
T Consensus        16 ~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l   89 (434)
T PRK15075         16 AILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFAS------LMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGL   89 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHH------HHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHH
Confidence            455555666666667777778889888888877665321      00111122233444467888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073          234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH  313 (402)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~  313 (402)
                      +.+..+.+++.++.++........              ......+++..+..+.+.....+....+++|.+|++.|+++.
T Consensus        90 ~~~~~~~~~~~~l~~~~~~~~~~~--------------~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~  155 (434)
T PRK15075         90 IVTLSIMASGTLLIAFVPGYATIG--------------LAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYT  155 (434)
T ss_pred             HHHHHHHHHHHHHHHhCCcHHHHH--------------HHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHH
Confidence            999888888777766531100000              000011233333334333334455667899999999999999


Q ss_pred             hHHHHHHHHhHHHHhHhHHhhh--------hccCCcchhhHHHHHHH
Q 045073          314 GISAAAGKAGAIVGAFGVQYYT--------QKGDKQIKQSIITLAVV  352 (402)
Q Consensus       314 ~~~~~~~~~g~~i~~~~~~~~~--------~~~~~~~~~~~~~~~~~  352 (402)
                      ++.....+++..+++.+.+.+.        +..  +|+.+|++.++.
T Consensus       156 ~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~--gWr~~f~~~~~~  200 (434)
T PRK15075        156 SWQSASQQVAVVFAALLGYLLNQWLSPAQMAEW--GWRIPFLIGCLI  200 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhcc--chHHHHHHHHHH
Confidence            9998888888777776655542        233  899888875443

>TIGR00898 2A0119 cation transport protein

Probab=99.32  E-value=4.4e-12  Score=121.52  Aligned_cols=155  Identities=15%  Similarity=0.190  Sum_probs=116.9

Q ss_pred             hhhhhhhhhcCcc---hhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHH
Q 045073          174 LAQKDIYPATGIV---RKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGAR  250 (402)
Q Consensus       174 ~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~  250 (402)
                      .+.|.+.++++++   +.+.+.            ......++.+++.++.|+++||+|||+++..+.++.+++.++.++.
T Consensus       110 ~~~~~i~~e~~l~c~~~~~~~~------------~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~  177 (505)
T TIGR00898       110 TFSSTIVTEWDLVCEDAWKVDL------------TQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFS  177 (505)
T ss_pred             cccccEEEEecceechHHHHHH------------HHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHc
Confidence            3556777778887   554443            7778888999999999999999999999999888877777666542


Q ss_pred             hhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHh
Q 045073          251 YDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFG  330 (402)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~  330 (402)
                                           . ....+.+...+.+++..+..+...+++.|.+|++.|+.+.++......+|.++++.+
T Consensus       178 ---------------------~-~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~  235 (505)
T TIGR00898       178 ---------------------P-NYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLV  235 (505)
T ss_pred             ---------------------c-cHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHH
Confidence                                 2 223344444444554555567788899999999999999999988888888888876


Q ss_pred             HHhhhhccCCcchhhHHHHHHHHHHHhhheeeeeccC
Q 045073          331 VQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETN  367 (402)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~  367 (402)
                      ...+.     +|++.+++.++..++..+..+++||+.
T Consensus       236 ~~~~~-----~wr~~~~~~~i~~~~~~~~~~~~~esp  267 (505)
T TIGR00898       236 AYFIP-----DWRWLQLAVSLPTFLFFLLSWFVPESP  267 (505)
T ss_pred             HHHhh-----HHHHHHHHHHHHHHHHHHHHHhcCCCh
Confidence            65443     588888888888777776666678864

>PRK15034 nitrate/nitrite transport protein NarU; Provisional

Probab=99.32  E-value=5.4e-11  Score=109.85  Aligned_cols=180  Identities=11%  Similarity=0.036  Sum_probs=115.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHH
Q 045073          154 HLLGTTSTWFLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFII  232 (402)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~  232 (402)
                      .++...+..+......+......+.+.+ ++|++..+.+.            ...+..+...++.+..|++.||+|.|++
T Consensus        35 ~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~------------l~ai~~l~~al~rip~G~l~Dr~G~R~v  102 (462)
T PRK15034         35 NLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFL------------LTALPSVSGALLRVPYSFMVPIFGGRRW  102 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCChHH
Confidence            4455554444444455555555556555 68999887665            5555666666777888999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhh
Q 045073          233 QLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTC  312 (402)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~  312 (402)
                      +.++.++.++..+..++....   .              .++...+.+...+.+.. .+..+.....+++.+|++.||++
T Consensus       103 ~~~~~ll~~i~~~~~~~a~~~---~--------------~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A  164 (462)
T PRK15034        103 TVFSTAILIIPCVWLGIAVQN---P--------------NTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSA  164 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHHcc---c--------------CCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHH
Confidence            999988887777766653110   0              12233333333333333 33455677788999999999999


Q ss_pred             hhHHHHHHHHhHHHHhHhHHhhh-----hccC-----------CcchhhHHHHHHHHHHHhhheeee
Q 045073          313 HGISAAAGKAGAIVGAFGVQYYT-----QKGD-----------KQIKQSIITLAVVNFLGFLCSFMV  363 (402)
Q Consensus       313 ~~~~~~~~~~g~~i~~~~~~~~~-----~~~~-----------~~~~~~~~~~~~~~~i~~i~~~~~  363 (402)
                      .|+....+++|..+++++.+.+.     ...+           .+++.+.++..++.++..++.++.
T Consensus       165 ~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~  231 (462)
T PRK15034        165 LGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSG  231 (462)
T ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99998777788777666554433     1110           035666666667666666555544

>TIGR00885 fucP L-fucose:H+ symporter permease

Probab=99.32  E-value=6.6e-11  Score=109.77  Aligned_cols=175  Identities=11%  Similarity=-0.039  Sum_probs=122.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHH
Q 045073          155 LLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQL  234 (402)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~  234 (402)
                      ++.++..++.............|.+.+++|.+..+.+.            ......++.+++++..|++.||+|||+.+.
T Consensus         5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~------------l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~   72 (410)
T TIGR00885         5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAAL------------VQSAFYGGYFIMAIPAAIFMKKLSYKAGIL   72 (410)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCchHHHH
Confidence            34455555555555555567778888889999887665            778888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhh
Q 045073          235 GGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHG  314 (402)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~  314 (402)
                      .+..+.+++.++......                   ..+........+..+.+.....+....+..+..|++.|++..+
T Consensus        73 ~g~~l~~~g~~l~~~~~~-------------------~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~  133 (410)
T TIGR00885        73 LGLFLYALGAFLFWPAAE-------------------IMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLN  133 (410)
T ss_pred             HHHHHHHHHHHHHHHHHh-------------------hccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHH
Confidence            999888887766543211                   1122223333333333223333445566778889999999999


Q ss_pred             HHHHHHHHhHHHHhHhHHhhhhccC------------------------CcchhhHHHHHHHHHHHhhhe
Q 045073          315 ISAAAGKAGAIVGAFGVQYYTQKGD------------------------KQIKQSIITLAVVNFLGFLCS  360 (402)
Q Consensus       315 ~~~~~~~~g~~i~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~i~~i~~  360 (402)
                      +.+.+..+|..++|.+.+.+.....                        .+|+.+|.+.+++.++..++.
T Consensus       134 ~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~  203 (410)
T TIGR00885       134 LAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI  203 (410)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999988776643210                        048888888887666554443

This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.

>TIGR00897 2A0118 polyol permease family

Probab=99.32  E-value=5e-11  Score=110.73  Aligned_cols=160  Identities=12%  Similarity=-0.036  Sum_probs=105.0

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHH
Q 045073          157 GTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGG  236 (402)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~  236 (402)
                      ...+..+......+....+.+.+.+++|.+..+.+.            ......++..++.++.|++.||+|||+.+..+
T Consensus        17 ~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~------------~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~   84 (402)
T TIGR00897        17 WGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSAS------------AFTLYGIAAAISAWISGVVAEIIGPLKTMMIG   84 (402)
T ss_pred             HHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHH------------HHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHH
Confidence            333333444444444555667778889998887665            77788888899999999999999999999998


Q ss_pred             HHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHH
Q 045073          237 FLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGIS  316 (402)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~  316 (402)
                      ..+.+++.++......  .                ...+....+.....+.+.....+....+..+.+|+++|+++.|+.
T Consensus        85 ~~~~~~~~~~~~~~~~--~----------------~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~  146 (402)
T TIGR00897        85 LLLWCVGHAAFIVFGL--G----------------HANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWF  146 (402)
T ss_pred             HHHHHHHHHHHHHHhc--c----------------CccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHH
Confidence            8877776554322111  0                111222222222222222222233445667889999999999999


Q ss_pred             HHHHHHhH-HHHhHhHHhhhhccCCcchhhHHH
Q 045073          317 AAAGKAGA-IVGAFGVQYYTQKGDKQIKQSIIT  348 (402)
Q Consensus       317 ~~~~~~g~-~i~~~~~~~~~~~~~~~~~~~~~~  348 (402)
                      +....+|. .++|.+.+.+.+..  ++...++.
T Consensus       147 ~~~~~~g~~~~g~~~~~~l~~~~--g~~~~~~~  177 (402)
T TIGR00897       147 WAVYSIGIGVFGSYYSSYAIPAF--GEMNTLWS  177 (402)
T ss_pred             HHHHHHHHHHHHHHHHHhccccc--chHHHHHH
Confidence            99999886 57888888777665  55444443

This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.

>PRK09952 shikimate transporter; Provisional

Probab=99.31  E-value=1.1e-10  Score=109.58  Aligned_cols=145  Identities=13%  Similarity=0.024  Sum_probs=97.6

Q ss_pred             HHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHH
Q 045073          207 LVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLF  286 (402)
Q Consensus       207 ~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (402)
                      ....++..+|.++.|+++||+|||+.+..+..+.+++.++.++........              ......+.+.....+
T Consensus        71 ~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~l~~~R~l~G  136 (438)
T PRK09952         71 GVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIG--------------WWAPVLLVTLRAIQG  136 (438)
T ss_pred             HHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHH--------------HHHHHHHHHHHHHHH
Confidence            345567788889999999999999999999888888877776642100000              000112333444455


Q ss_pred             HHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhh--------ccCCcchhhHHHHHHHHHHHhh
Q 045073          287 FANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQ--------KGDKQIKQSIITLAVVNFLGFL  358 (402)
Q Consensus       287 ~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~i~~i  358 (402)
                      .+..+..+....++.|.+|++.|+...+.......+|..+++.+...+..        ..  +|+.+|++.++..++...
T Consensus       137 ~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~--gWr~~f~~~~~~~l~~~~  214 (438)
T PRK09952        137 FAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSW--GWRIPFLFSIVLVLIALW  214 (438)
T ss_pred             hhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhcc--ChHHHHHHHHHHHHHHHH
Confidence            54555556667889999999999999998888888888877765554432        23  899999887776655433


Q ss_pred             heeeeeccC
Q 045073          359 CSFMVPETN  367 (402)
Q Consensus       359 ~~~~~~et~  367 (402)
                      +....||++
T Consensus       215 l~~~~~es~  223 (438)
T PRK09952        215 VRNGMEESA  223 (438)
T ss_pred             HHHhCCCCh
Confidence            322345653

>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.31  E-value=9.4e-10  Score=104.89  Aligned_cols=307  Identities=11%  Similarity=0.117  Sum_probs=172.1

Q ss_pred             CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCC--chhHHHHHHh
Q 045073            2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGD--YLWRIVLMFG   79 (402)
Q Consensus         2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Wr~~f~~~   79 (402)
                      ++.+.+|+-|...+++-..++++......+|.++|.++|.++.....+...++     +..+- .+..  ..|..-|+++
T Consensus       255 ~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~-----~~it~-~DPrWIGAWWlGFLi~  328 (735)
T KOG3626|consen  255 FTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSP-----IGITP-TDPRWIGAWWLGFLIC  328 (735)
T ss_pred             ccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCC-----CCCCC-CCcchhhHHHHHHHHH
Confidence            57788999999999999999999999999999999999999986554321110     00000 1122  2576777776


Q ss_pred             HHHHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhh-hhhHHHHHH
Q 045073           80 AVPAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQ-KHGLHLLGT  158 (402)
Q Consensus        80 ~i~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  158 (402)
                      +...++..+.++++|....-     ..++...++.      +..++.++..+.........+.|-+..+| -..+.++..
T Consensus       329 g~~~~~~a~p~f~fPk~lp~-----~~~~~~~~~~------~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~  397 (735)
T KOG3626|consen  329 GALLLFSAVPLFFFPKELPK-----SQKRKRARDL------HVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLV  397 (735)
T ss_pred             HHHHHHHHHHHHhCcccCcc-----ccccchhhhh------cccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHH
Confidence            66666666666777765321     1100000000      00000000000000000011111111111 112356677


Q ss_pred             HHHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccc--hhHHHHH
Q 045073          159 TSTWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIG--RFIIQLG  235 (402)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g--rr~~~~~  235 (402)
                      .+........+.+...|+|.|++. +|.+...+..           +...+...+..+|.+++|+++.|+.  .|....+
T Consensus       398 ~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~-----------l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~  466 (735)
T KOG3626|consen  398 VLASVIESLAITGYITFLPKYLETQFGISASLANI-----------LTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKF  466 (735)
T ss_pred             HHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHH-----------HhhhhhhhhhhhhhhccceeeeeecccHHHHHHH
Confidence            777777788888999999999975 8888887554           2344555566778889999999874  3444444


Q ss_pred             HHHHHHHHHHHHH---HHhhc-----------c----cCC------------CCC-------------------------
Q 045073          236 GFLLMSICMAILG---ARYDS-----------L----RGK------------KCD-------------------------  260 (402)
Q Consensus       236 ~~~~~~~~~~~~~---~~~~~-----------~----~~~------------~~~-------------------------  260 (402)
                      .++...++.+...   +....           .    ...            +|+                         
T Consensus       467 ~~~~~~l~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~  546 (735)
T KOG3626|consen  467 VIVCSVLSLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTE  546 (735)
T ss_pred             HHHHHHHHHHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcc
Confidence            4333333333211   11100           0    000            000                         


Q ss_pred             ----------------------CCCCCCccccCCc----hHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhh
Q 045073          261 ----------------------PKKDPLHEYCDGN----HAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHG  314 (402)
Q Consensus       261 ----------------------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~  314 (402)
                                            .......+.|+.+    ...+++++.+..+....+.. ..+.++-...|++.|+.++|
T Consensus       547 ~~~~~~~~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~-p~~~i~LR~V~~e~ks~AlG  625 (735)
T KOG3626|consen  547 SSGTSDGNTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAV-PGMLIVLRCVPPEEKSFALG  625 (735)
T ss_pred             cccCCCCceeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccC-cceEEEEEccCchhchhhhH
Confidence                                  0011112334433    22333333333333334433 34556677889999999999


Q ss_pred             HHHHHHHH-hHHHHhHhHHhhhhc
Q 045073          315 ISAAAGKA-GAIVGAFGVQYYTQK  337 (402)
Q Consensus       315 ~~~~~~~~-g~~i~~~~~~~~~~~  337 (402)
                      +..++.++ |.+-+|.++|++.|.
T Consensus       626 ~~~~~irllg~IPsPIifG~~ID~  649 (735)
T KOG3626|consen  626 FQWMLIRLLGFIPSPIIFGAVIDT  649 (735)
T ss_pred             HHHHHHHHHhcCCchHhhhhhHhh
Confidence            99888775 677899999999875

>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]

Probab=99.31  E-value=7.8e-11  Score=98.21  Aligned_cols=172  Identities=10%  Similarity=0.052  Sum_probs=107.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073          155 LLGTTSTWFLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ  233 (402)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~  233 (402)
                      ++.+....+......+-+....|.+++ .+|+|+..++.            +.+.....+.+.+.+.|.++||+|++...
T Consensus       266 fw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~------------i~s~vy~Isav~spvfg~i~Dk~G~n~~w  333 (459)
T KOG4686|consen  266 FWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGN------------ILSTVYGISAVLSPVFGAISDKYGFNLWW  333 (459)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccc------------hhhhhhhhhhhhhhhHHHhHhhhcceehh
Confidence            444444444444555555556677775 49999887554            44444555666777899999999999776


Q ss_pred             HHHHHHHHH-HHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhh
Q 045073          234 LGGFLLMSI-CMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTC  312 (402)
Q Consensus       234 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~  312 (402)
                      +.+..+..+ +-..+.+..                    -+.+.-+.++++.......    ..|..++-+.|.+.-|++
T Consensus       334 v~~a~~~tl~~H~~l~Ft~--------------------lsPy~~m~~lGLsysllAc----slWP~va~~vpE~qLGTa  389 (459)
T KOG4686|consen  334 VASACILTLLGHSGLFFTF--------------------LSPYTSMTFLGLSYSLLAC----SLWPCVASLVPEEQLGTA  389 (459)
T ss_pred             HHHHHHHHHHHhhhHHhhh--------------------ccHHHHHHHHhhhHHHHHH----HHhhhhhhhCCHHHhcch
Confidence            655433222 222222221                    1222333333333222222    355566788899999999


Q ss_pred             hhHHHHHHHHhHHHHhHhHHhhhhccCCcch---hhHHHHHHHHHHHhhheeee
Q 045073          313 HGISAAAGKAGAIVGAFGVQYYTQKGDKQIK---QSIITLAVVNFLGFLCSFMV  363 (402)
Q Consensus       313 ~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~i~~~~~  363 (402)
                      .|+.+.+.++|-.+.|.+.+.+.+..+ ++.   ..|.+...+++++..+.+.+
T Consensus       390 ygf~qsIqNLgla~i~Iiag~i~d~~g-~y~~le~ffl~~~~~aL~svgil~~~  442 (459)
T KOG4686|consen  390 YGFIQSIQNLGLAFIPIIAGFIADGDG-SYDNLEAFFLIIGLMALTSVGILFYL  442 (459)
T ss_pred             HHHHHHHHhhhhhHHhhhhheeecCCC-chhhHHHHHHHHHHHHHHHHHHHhhe
Confidence            999999999999999999999988764 232   33444445555565555555

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

Probab=99.31  E-value=6.5e-11  Score=104.70  Aligned_cols=175  Identities=15%  Similarity=0.109  Sum_probs=129.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073          154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ  233 (402)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~  233 (402)
                      .++.............+......+.+-+++++|+.+..+            +..+..+...+..+..|++.||+|.|+..
T Consensus        15 ~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~l------------l~aiPil~GallRl~~g~l~drfGgR~~~   82 (417)
T COG2223          15 NLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGL------------LVAIPILVGALLRLPYGFLTDRFGGRKWT   82 (417)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHH------------HHHHHHHHhHHHHHHHHhhhcccCchHHH
Confidence            444444444444444555555556666789999998666            77777888888899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073          234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH  313 (402)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~  313 (402)
                      ..+.++..+-.+.+++...                   ....+..+.+.++.+. ..+..++...++++.||++.+|.+.
T Consensus        83 ~~s~~l~~IP~~~~~~a~~-------------------~~~~~~ll~~gll~G~-~GasFav~m~~~s~~fP~~~qG~Al  142 (417)
T COG2223          83 ILSMLLLLIPCLGLAFAVT-------------------YPSTWQLLVIGLLLGL-AGASFAVGMPNASFFFPKEKQGLAL  142 (417)
T ss_pred             HHHHHHHHHHHHHHHHHcc-------------------CCchHHHHHHHHHHhc-ccceehcccccccccCChhhhhHHH
Confidence            9998888877777776543                   1212333333333333 3455667788899999999999999


Q ss_pred             hHHHHHHHHhHHHHhHhHHhhhhccCCc---chhhHHHHHHHHHHHhhheeee
Q 045073          314 GISAAAGKAGAIVGAFGVQYYTQKGDKQ---IKQSIITLAVVNFLGFLCSFMV  363 (402)
Q Consensus       314 ~~~~~~~~~g~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~i~~~~~  363 (402)
                      |+.. .+++|..+..++.+.+....  +   |+.+..+..+..++..+..++.
T Consensus       143 GI~g-~GN~G~av~q~~~P~v~~~~--g~~~w~~~~~i~~~~l~v~~v~~~~~  192 (417)
T COG2223         143 GIAG-AGNLGVAVAQLVAPLVAVAF--GFLAWRNVAGIYVVALAIAAVLAWLG  192 (417)
T ss_pred             HHhc-cccccHHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999 99999999999999888877  6   7888888777777777666643

>PRK09705 cynX putative cyanate transporter; Provisional

Probab=99.29  E-value=8.9e-11  Score=108.62  Aligned_cols=154  Identities=12%  Similarity=0.031  Sum_probs=114.3

Q ss_pred             HHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 045073          168 AFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAIL  247 (402)
Q Consensus       168 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~  247 (402)
                      ..+......|.+.+++|++..+.+.            ......++..++.++.|+++||+|||+++..+..+.+++.+..
T Consensus        24 ~~~~~~~~lp~i~~~~~~s~~~~g~------------~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~   91 (393)
T PRK09705         24 LLTSVGPLLPQLRQASGMSFSVAAL------------LTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMR   91 (393)
T ss_pred             hhhccchhHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence            3355667789999999999887666            6777778888889999999999999999999999999988887


Q ss_pred             HHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHH
Q 045073          248 GARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVG  327 (402)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~  327 (402)
                      ++.                     ++. ..+.+..+..+.+.....+....++.+.+| +.|+.+.++.......|..++
T Consensus        92 ~~a---------------------~~~-~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g  148 (393)
T PRK09705         92 ELY---------------------PQS-ALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLG  148 (393)
T ss_pred             HHC---------------------cch-HHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHH
Confidence            763                     222 233333444443333344455667788887 779999999998888899999


Q ss_pred             hHhHHhhhhccCCcchhhHHHHHHHHHHHh
Q 045073          328 AFGVQYYTQKGDKQIKQSIITLAVVNFLGF  357 (402)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  357 (402)
                      +.+.+.+.+... +|+..+.+.++..++..
T Consensus       149 ~~~~~~l~~~~~-~w~~~~~~~~~~~~~~~  177 (393)
T PRK09705        149 AAITPWLVQHSE-TWYQTLAWWALPAVVAL  177 (393)
T ss_pred             HHHHHHHHHhcC-CHHHHHHHHHHHHHHHH
Confidence            988888776542 68877766555544443

>PRK03633 putative MFS family transporter protein; Provisional

Probab=99.28  E-value=1.3e-10  Score=107.17  Aligned_cols=150  Identities=13%  Similarity=0.023  Sum_probs=110.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073          154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ  233 (402)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~  233 (402)
                      .++......+...........+.|.+.+++|.+..+.+.            ......++..++.++.|+++||+|||+.+
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~------------~~s~~~l~~~~~~~~~g~l~dr~g~k~~~   74 (381)
T PRK03633          7 PVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGV------------VSSSYFTGNLVGTLLAGYVIKRIGFNRSY   74 (381)
T ss_pred             HHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            345555555556666677778899999999998887665            77778888899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073          234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH  313 (402)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~  313 (402)
                      ..+.++.+++.+.....                     ++. ..+.+..+..+.+.....+.......+..|++.|+++.
T Consensus        75 ~~~~~~~~~~~~~~~~~---------------------~~~-~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (381)
T PRK03633         75 YLASLIFAAGCAGLGLM---------------------VGF-WSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLL  132 (381)
T ss_pred             HHHHHHHHHHHHHHHHh---------------------ccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence            99888887777665543                     222 23333333333333333344444556788889999999


Q ss_pred             hHHHHHHHHhHHHHhHhHHhhhhc
Q 045073          314 GISAAAGKAGAIVGAFGVQYYTQK  337 (402)
Q Consensus       314 ~~~~~~~~~g~~i~~~~~~~~~~~  337 (402)
                      +.......+|..+++.+.+.+.+.
T Consensus       133 ~~~~~~~~~g~~~g~~~~~~l~~~  156 (381)
T PRK03633        133 AAYMMVYYLGTVLGQLLVSKVSTE  156 (381)
T ss_pred             HHHHHHHHHHHHHHHHHHhccccc
Confidence            999999999999999998887654

>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]

Probab=99.27  E-value=7.5e-12  Score=109.23  Aligned_cols=268  Identities=11%  Similarity=0.054  Sum_probs=155.9

Q ss_pred             CcchhhhhhccCccc-chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073            3 PLSAVIMSEYANKRT-RGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV   81 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~-Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i   81 (402)
                      ....++++|.+|++. |++++|+.-.+.++|.++||.+|+.+.                       +..|.+.+|++.++
T Consensus       178 tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilY-----------------------e~~Gk~aPFlVL~~  234 (464)
T KOG3764|consen  178 TSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILY-----------------------EFAGKSAPFLVLAI  234 (464)
T ss_pred             hhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchH-----------------------hhcCCcCcHHHHHH
Confidence            356788999888655 899999999999999999999999987                       77889999999888


Q ss_pred             HHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073           82 PAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST  161 (402)
Q Consensus        82 ~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (402)
                      .+++-..+.+++-|.-+     .+.+ +.                       ++....|++++++.      ........
T Consensus       235 v~Lld~~L~l~vi~p~~-----~~~~-~~-----------------------~~~~~~~~Ll~dP~------I~~~agai  279 (464)
T KOG3764|consen  235 VLLLDGALQLLVIEPTE-----MDPD-ST-----------------------EQGTPMWSLLMDPY------ILLIAGAI  279 (464)
T ss_pred             HHHHHHHHHHheeCccc-----cCcc-cc-----------------------ccCccHHHHHhCch------Hhhhhcch
Confidence            88887666666543211     1110 00                       11122333333331      12222222


Q ss_pred             HHHHHHHHHHHHhhhhhh-hhhcCcchh-hhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccc--hhHHHHHHH
Q 045073          162 WFLLDIAFYTINLAQKDI-YPATGIVRK-AAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIG--RFIIQLGGF  237 (402)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~-~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g--rr~~~~~~~  237 (402)
                      .+...... .....++.+ .+++. ++. +.+.            ......+...+++.+.|.+.||++  |-.....+.
T Consensus       280 ~~~n~~la-fLePtlslwm~e~m~-~p~w~~G~------------~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl  345 (464)
T KOG3764|consen  280 TFSNSSLA-FLEPTLSLWMLETMF-TPGWEVGL------------AFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGL  345 (464)
T ss_pred             hhccchHH-HhCcccHHHHHHhcc-CCCcceee------------eecccccchhccCchHHHHHHhcCchhHHHHHHHH
Confidence            22221111 111122222 23343 222 3333            566677888899999999999999  433333333


Q ss_pred             HHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccc---hhhhhhh
Q 045073          238 LLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPAR---LRSTCHG  314 (402)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~---~r~~~~~  314 (402)
                      +..+++.....+...+                  ...+......++..........|. ..+..|.--.+   .-|...+
T Consensus       346 ~~~G~~~~~iP~~~~~------------------~~L~vp~~~l~~~i~~~dasl~P~-l~~lvd~rh~s~~~vYGsVya  406 (464)
T KOG3764|consen  346 ATVGVSSGPIPFATSI------------------AQLWVPNFGLGFGIGLADASLIPT-LGYLVDPRHVSGFNVYGSVYA  406 (464)
T ss_pred             HHHHHHhchhHhhhhH------------------HHHhhhhHHHHHHHHHHHHHHhhh-hHHhcchhhccccceeeeHHH
Confidence            3333332222222110                  111111111111112222223322 22333332223   5578899


Q ss_pred             HHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073          315 ISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV  363 (402)
Q Consensus       315 ~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~  363 (402)
                      +......+|.++||.+.+.+.+..  |+.|...+.++..++...+..++
T Consensus       407 Iad~a~sla~a~GP~~gg~iv~~i--GF~wl~~iig~~n~iyapvl~ll  453 (464)
T KOG3764|consen  407 IADAAFSLAYAIGPTFGGSLVEAI--GFEWLMTIIGILNLIYAPVLLLL  453 (464)
T ss_pred             HHHHHHHHhhhccccccchheeeh--hHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999988  88888888888888776665543

>PTZ00207 hypothetical protein; Provisional

Probab=99.27  E-value=2.8e-10  Score=108.18  Aligned_cols=181  Identities=17%  Similarity=0.056  Sum_probs=104.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhhc-CcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchh--
Q 045073          154 HLLGTTSTWFLLDIAFYTINLAQKDIYPAT-GIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRF--  230 (402)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr--  230 (402)
                      .+|+++...++...........+..+.+.+ |.+.+..          ....+..+..+++.+|.+.+|++.....||  
T Consensus       354 d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~----------~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~  423 (591)
T PTZ00207        354 RLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDA----------LNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRA  423 (591)
T ss_pred             hHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCcc----------ceeeehhhhhHHHHhhHHHHHHHHHHHHhhcc
Confidence            577777777776655555666667777777 6632220          011145666778888888888877333222  


Q ss_pred             ------HHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccccccccc
Q 045073          231 ------IIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELF  304 (402)
Q Consensus       231 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~  304 (402)
                            ++.+....++.++.+++....                    +.  ..+.+-.+..+++.+..+++..+.++|+|
T Consensus       424 ~~r~prt~~l~~~~~~~~~~lll~~~~--------------------p~--~~L~~~~~lvg~~~G~~~~~~~~i~selF  481 (591)
T PTZ00207        424 EDRVPITIALFIPSVCIITMLTLFLTL--------------------PK--AALPLPYFIAAFANGFMAATIALVTRTIF  481 (591)
T ss_pred             ccccchhHHHHHHHHHHHHHHHHHHHC--------------------Cc--cHhHHHHHHHHHHhhHhHHHHHHHHHHHh
Confidence                  222222222334434333321                    10  12222222223333334456777889999


Q ss_pred             ccchhhhhhhHHHHHHHHhHHHH-hHhHHhhhhccCC-----------cchhhHHHHHHHHHHHhhheeee-eccC
Q 045073          305 PARLRSTCHGISAAAGKAGAIVG-AFGVQYYTQKGDK-----------QIKQSIITLAVVNFLGFLCSFMV-PETN  367 (402)
Q Consensus       305 p~~~r~~~~~~~~~~~~~g~~i~-~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~i~~i~~~~~-~et~  367 (402)
                      . ++-|+-+-+.....-+|.++- -.+.|.+.|....           =++.+|++.+++++++++....+ -+|+
T Consensus       482 g-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R~r  556 (591)
T PTZ00207        482 A-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQYR  556 (591)
T ss_pred             c-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeeehH
Confidence            9 777888777777777777654 4566766654320           35688999999998888876654 4444

>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=99.27  E-value=5.3e-11  Score=109.55  Aligned_cols=147  Identities=16%  Similarity=0.107  Sum_probs=107.5

Q ss_pred             HHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHH
Q 045073          204 AMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGL  283 (402)
Q Consensus       204 ~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (402)
                      .......+++++|+++.++++||+|||..++.+.++..++.+++.....                   .+....+++-.+
T Consensus        64 ~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~-------------------~~~~e~li~GR~  124 (485)
T KOG0569|consen   64 LIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKS-------------------APSFEMLILGRL  124 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHH-------------------hhhHHHHHHHHH
Confidence            3667788999999999999999999999999888887777766665543                   233344444444


Q ss_pred             HHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhH-HhhhhccCCcchhhHHHHHHHHHHHhhheee
Q 045073          284 TLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGV-QYYTQKGDKQIKQSIITLAVVNFLGFLCSFM  362 (402)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~  362 (402)
                      ..+............+..|..|++.||....+......+|..++..+. ..+..... .|+..+.+..+.+++..+...+
T Consensus       125 i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~-~W~~l~~~~~i~~~~~l~~l~~  203 (485)
T KOG0569|consen  125 IVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTED-LWPYLLAFPLIPALLQLALLPF  203 (485)
T ss_pred             HHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCc-chHHHHHHHHHHHHHHHHHHhc
Confidence            444333333345566889999999999999999998888888885433 34443321 6778888888888888888888


Q ss_pred             eeccCCcc
Q 045073          363 VPETNGLS  370 (402)
Q Consensus       363 ~~et~~~~  370 (402)
                      +||+.+.-
T Consensus       204 ~PESPk~L  211 (485)
T KOG0569|consen  204 LPESPKYL  211 (485)
T ss_pred             CCCCcchH
Confidence            99986543

>PRK11010 ampG muropeptide transporter; Validated

Probab=99.27  E-value=1.5e-10  Score=109.95  Aligned_cols=179  Identities=15%  Similarity=0.096  Sum_probs=121.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhcc-----c
Q 045073          154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRI-----G  228 (402)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-----g  228 (402)
                      +.+......+.+....+.....+|.++++.|.+..+.+.            ...+ ... .++.++.+.++||+     |
T Consensus        13 ~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~------------~~~~-~~~-~~~~~l~gpl~Dr~~~~~~G   78 (491)
T PRK11010         13 NSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGF------------FSLV-GQA-YVFKFLWSPLMDRYTPPFLG   78 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHH------------HHHH-HHH-HHHHHHHHHHHHcccccCCC
Confidence            455566666666667777777788898888888776443            1111 111 25678999999999     9


Q ss_pred             hhHH-HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccc
Q 045073          229 RFII-QLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPAR  307 (402)
Q Consensus       229 rr~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~  307 (402)
                      ||+. ++.+.+..+++...+++...                   ......+....+...++.....+...++..|.+|++
T Consensus        79 rrr~~ll~~~i~~~~~~~~~a~~~~-------------------~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~  139 (491)
T PRK11010         79 RRRGWLLATQLLLLVAIAAMGFLEP-------------------GTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAE  139 (491)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHcCC-------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence            8875 55665555555555544210                   122223332233333333444556778899999999


Q ss_pred             hhhhhhhHHHHHHHHhHHHHhHhHHhhhh-ccCCcchhhHHHHHHHHHHHhhheeeeeccC
Q 045073          308 LRSTCHGISAAAGKAGAIVGAFGVQYYTQ-KGDKQIKQSIITLAVVNFLGFLCSFMVPETN  367 (402)
Q Consensus       308 ~r~~~~~~~~~~~~~g~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~  367 (402)
                      .|+++.++......+|..+++.+...+.+ ..  +|+..|++.+++.++..+..++.||++
T Consensus       140 ~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~--GWr~~f~i~a~l~ll~~l~~~~~~e~~  198 (491)
T PRK11010        140 ERGAGAAISVLGYRLAMLVSGGLALWLADRYL--GWQGMYWLMAALLIPCIIATLLAPEPT  198 (491)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--CHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence            99999999999999999999988888877 34  899999998888777766655567754

>TIGR00899 2A0120 sugar efflux transporter

Probab=99.26  E-value=1.4e-10  Score=106.68  Aligned_cols=170  Identities=12%  Similarity=0.029  Sum_probs=109.6

Q ss_pred             HHHHHHHHHHHHhhhhhhh-hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHH-HHHH
Q 045073          162 WFLLDIAFYTINLAQKDIY-PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLG-GFLL  239 (402)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~-~~~~  239 (402)
                      .+.............|.++ +++|.+..+.+.            ......+..++..++.|+++||+|||+.++. +...
T Consensus         6 ~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~------------~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~   73 (375)
T TIGR00899         6 AFLTGIAGALQFPTLSLFLSEEVRARPAMIGL------------FYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLL   73 (375)
T ss_pred             HHHHHHHHHHHhhHHHHHHHcccCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHH
Confidence            3344445555556667665 568988877655            5666667777788899999999998886554 4443


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhh--hhHHH
Q 045073          240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTC--HGISA  317 (402)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~--~~~~~  317 (402)
                      ..++.++....                     .+ ...+.+.....+.......+...++..|..|++.|+.+  .+...
T Consensus        74 ~~~~~~~~~~~---------------------~~-~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  131 (375)
T TIGR00899        74 AALACLLFAWN---------------------RN-YFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMR  131 (375)
T ss_pred             HHHHHHHHHhc---------------------ch-HHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHH
Confidence            33343333331                     12 22222222222222233445556667788777777654  57777


Q ss_pred             HHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheee-eeccC
Q 045073          318 AAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFM-VPETN  367 (402)
Q Consensus       318 ~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~-~~et~  367 (402)
                      ....+|..+++.+.+.+.+..  +|+..|++.+++.++..++.++ +||.+
T Consensus       132 ~~~~~g~~ig~~~~~~l~~~~--~~~~~f~~~~~~~~~~~~~~~~~~~~~~  180 (375)
T TIGR00899       132 AQISLAWVIGPPLAFWLALGF--GFTVMFLTAALAFVLCGVLVWLFLPSYP  180 (375)
T ss_pred             HHHhHHHHHhhhHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence            778889999999999888776  8999999988887776665543 57643

This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.

>TIGR00806 rfc RFC reduced folate carrier

Probab=99.25  E-value=2.3e-10  Score=104.15  Aligned_cols=155  Identities=11%  Similarity=0.013  Sum_probs=118.2

Q ss_pred             HhhhhhhhhhcCcchhh-hhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHh
Q 045073          173 NLAQKDIYPATGIVRKA-AAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARY  251 (402)
Q Consensus       173 ~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~  251 (402)
                      ....|.+.+++|++..+ .+.            +......+..+..+.+|+++||+|.|+++..+.+..++..+++++. 
T Consensus        46 s~a~p~L~~elglT~~qv~G~------------I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa-  112 (511)
T TIGR00806        46 SFITPYLLTVLNFTEETVTNE------------IIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLG-  112 (511)
T ss_pred             HHHHHHHHHHcCCCHHHhcch------------HHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH-
Confidence            33456777789999887 555            7777778888888899999999999999999988888888877774 


Q ss_pred             hcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhH
Q 045073          252 DSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGV  331 (402)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~  331 (402)
                                           .....+.+..++.+.+..+.. ....++...+|++.|+++.|+.+....+|.++++.+.
T Consensus       113 ---------------------~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~  170 (511)
T TIGR00806       113 ---------------------TSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLG  170 (511)
T ss_pred             ---------------------HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                                 223444445555555555555 7788899999999999999999999999999999999


Q ss_pred             HhhhhccCCcchh---hHHHHHHHHHHHhhheeeeec
Q 045073          332 QYYTQKGDKQIKQ---SIITLAVVNFLGFLCSFMVPE  365 (402)
Q Consensus       332 ~~~~~~~~~~~~~---~~~~~~~~~~i~~i~~~~~~e  365 (402)
                      +.+. ..  +|+.   ..++..+...+++++.+++|.
T Consensus       171 qll~-s~--gWr~y~~Ln~Isl~s~~~a~~~a~~LP~  204 (511)
T TIGR00806       171 QLLV-TL--GWISYSTLNIISLVFMTFSVFLALFLKR  204 (511)
T ss_pred             HHHH-hc--CchhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            8844 34  6664   344545555677777778874

Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.

>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]

Probab=99.25  E-value=3.6e-11  Score=104.41  Aligned_cols=113  Identities=14%  Similarity=0.030  Sum_probs=91.2

Q ss_pred             HhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHH
Q 045073          201 ISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMIL  280 (402)
Q Consensus       201 ~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (402)
                      .++.+.....+.+++.+...|.++||+|||++++++.+..++...+.+..                      .+...++.
T Consensus        69 yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S----------------------~~F~afv~  126 (451)
T KOG2615|consen   69 YAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALS----------------------RNFAAFVL  126 (451)
T ss_pred             hhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHH----------------------HHHHHHHH
Confidence            44458888899999999999999999999999999988888877766653                      22222222


Q ss_pred             HHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhh
Q 045073          281 YGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQ  336 (402)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~  336 (402)
                      ..+. ++..-+..++..++++|+++++.|+.+++.......+|.++||.+.+++..
T Consensus       127 aR~l-~Gi~kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~  181 (451)
T KOG2615|consen  127 ARFL-GGIFKGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ  181 (451)
T ss_pred             HHHh-hhhccCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence            2333 333556667888999999999999999999999999999999999999877

>TIGR00880 2_A_01_02 Multidrug resistance protein

Probab=99.25  E-value=5.7e-11  Score=92.65  Aligned_cols=133  Identities=18%  Similarity=0.214  Sum_probs=97.0

Q ss_pred             HHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHH
Q 045073          209 ALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFA  288 (402)
Q Consensus       209 ~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (402)
                      ..++.+++.++.+++.||+|||+.+..+.....++.+.....                     .+. ....+.....+..
T Consensus         7 ~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~---------------------~~~-~~~~~~~~~~g~~   64 (141)
T TIGR00880         7 YALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS---------------------SNI-TVLIIARFLQGFG   64 (141)
T ss_pred             ehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh---------------------ccH-HHHHHHHHHHHHH
Confidence            455667778889999999999999988877776666555442                     122 2222222233333


Q ss_pred             hhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee-ec
Q 045073          289 NFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV-PE  365 (402)
Q Consensus       289 ~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~-~e  365 (402)
                      .....+....+..|.+|++.|+++.++.+....++..+++.+.+.+.+..  +|+..+.+.+++.+++.+..+++ ||
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (141)
T TIGR00880        65 AAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFL--GWRAPFLFLAILALAAFILLAFLLPE  140 (141)
T ss_pred             HHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhccc--chHHHHHHHHHHHHHHHHHHhhcCCC
Confidence            33344567778899999999999999999999999999999999988766  78888888887777776665544 54

>PTZ00207 hypothetical protein; Provisional

Probab=99.24  E-value=2.3e-10  Score=108.77  Aligned_cols=164  Identities=10%  Similarity=0.141  Sum_probs=105.5

Q ss_pred             HHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHH
Q 045073          164 LLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSIC  243 (402)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~  243 (402)
                      ......|....+.|.+.+++|++..+.+.            ........ ..+.+++|++.||+|+|+++.++.++..++
T Consensus        38 ~~~g~~y~fsv~s~~L~~~lgls~~~l~~------------i~svg~~~-g~~~lp~G~L~Dr~G~R~vllig~ll~~iG  104 (591)
T PTZ00207         38 ICTSFMYAFNLISGAMQARYNLTQRDLST------------ITTVGIAV-GYFLLPYSFIYDYLGPRPIFVLSMTVFCLG  104 (591)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCcCHHHHHH------------HHHHHHHH-HHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence            33455678888889998899998877443            22222222 234556899999999999999999999998


Q ss_pred             HHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHh
Q 045073          244 MAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAG  323 (402)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g  323 (402)
                      .++.++......                ....+.++++....+.+.....+.....+.+.|| +.||++.|+......+|
T Consensus       105 ~ll~ala~~~~i----------------~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLG  167 (591)
T PTZ00207        105 TLLFALTFQEVI----------------EGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLG  167 (591)
T ss_pred             HHHHHHHhcccc----------------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHH
Confidence            887776422100                1122333333333333333333344556688887 77999999999999999


Q ss_pred             HHH-HhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee
Q 045073          324 AIV-GAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF  361 (402)
Q Consensus       324 ~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~  361 (402)
                      +++ ++.....+.+    +++..|++.+++.++..++.+
T Consensus       168 saI~~~l~~~l~~~----~~~~~fl~l~vl~~vv~ll~~  202 (591)
T PTZ00207        168 SAILGSIQLAFFSD----NTSAYFFFLMSFALVVGILAI  202 (591)
T ss_pred             HHHHHHHHHHHHHH----hHHHHHHHHHHHHHHHHHHHH
Confidence            985 4444444432    667777777776665544443

>TIGR00805 oat sodium-independent organic anion transporter

Probab=99.24  E-value=7.5e-11  Score=114.78  Aligned_cols=194  Identities=10%  Similarity=-0.040  Sum_probs=130.1

Q ss_pred             HHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHH
Q 045073          162 WFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMS  241 (402)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~  241 (402)
                      .+............++.+-+++++++.+.+.            +.+...++..++.++.+++.||++||+.+.++.++++
T Consensus        42 ~~~~~~~~g~~~~~l~~iek~F~lss~~~G~------------i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~  109 (633)
T TIGR00805        42 QLQGLLYNGLVNSSLTTIERRFKLSTSSSGL------------INGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMG  109 (633)
T ss_pred             HHHHHHHHHHHHhhchhhhhhhCCCCCccee------------eeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHH
Confidence            3333333334444557777789999887766            6777788888888899999999999999999999999


Q ss_pred             HHHHHHHHHhhcccCCCCC---------------C---C---CCCC---ccccC-----CchHHHHHHHHHHHHHHhhCC
Q 045073          242 ICMAILGARYDSLRGKKCD---------------P---K---KDPL---HEYCD-----GNHAWFMILYGLTLFFANFGP  292 (402)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~---------------~---~---~~~~---~~~~~-----~~~~~~~~~~~~~~~~~~~~~  292 (402)
                      ++.++.+++.......+..               .   .   +.+.   ..-+.     ...+.++++..++.+.+....
T Consensus       110 lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~  189 (633)
T TIGR00805       110 LGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPI  189 (633)
T ss_pred             HHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcc
Confidence            9988887764221110000               0   0   0000   00000     112334444555555555666


Q ss_pred             ccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCC--------------------cchhhHHHHHHH
Q 045073          293 NSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDK--------------------QIKQSIITLAVV  352 (402)
Q Consensus       293 ~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~  352 (402)
                      .+...+++.|.+|++.|+...|+.+....+|..+|+.+.+.+.+...+                    +|+..|++.+++
T Consensus       190 ~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l  269 (633)
T TIGR00805       190 FPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGV  269 (633)
T ss_pred             hhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHH
Confidence            677889999999999999999999999999999999988887653210                    255667777777


Q ss_pred             HHHHhhheeeeeccC
Q 045073          353 NFLGFLCSFMVPETN  367 (402)
Q Consensus       353 ~~i~~i~~~~~~et~  367 (402)
                      .++..+..+++|++.
T Consensus       270 ~~l~~v~l~~~p~~l  284 (633)
T TIGR00805       270 ALLTSIPFFFFPKAL  284 (633)
T ss_pred             HHHHHHHHHhCcccc
Confidence            766655555556543

Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.

>PRK10133 L-fucose transporter; Provisional

Probab=99.23  E-value=3.9e-10  Score=105.62  Aligned_cols=150  Identities=11%  Similarity=-0.012  Sum_probs=107.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073          154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ  233 (402)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~  233 (402)
                      .+......++...+.........|.+.+++|.++.+.+.            ......++..++.++.|+++||+|||+++
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl------------~~~~~~~g~~i~~~~~g~l~dr~G~r~~l   94 (438)
T PRK10133         27 PFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGL------------IQSAFYFGYFIIPIPAGILMKKLSYKAGI   94 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCcHHHH
Confidence            445555566666667777888889998889999887666            77788888999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073          234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH  313 (402)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~  313 (402)
                      ..+..+.+++.+++.....                   .+....+.+..+..+.+.....+....++.|..|.+.|....
T Consensus        95 ~~g~~~~~~~~~l~~~~~~-------------------a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~  155 (438)
T PRK10133         95 ITGLFLYALGAALFWPAAE-------------------IMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRL  155 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHh-------------------cCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHH
Confidence            9999888888766432111                   122233333333333333333445556667877777777788


Q ss_pred             hHHHHHHHHhHHHHhHhHHhh
Q 045073          314 GISAAAGKAGAIVGAFGVQYY  334 (402)
Q Consensus       314 ~~~~~~~~~g~~i~~~~~~~~  334 (402)
                      ++.+....+|..+++.+.+.+
T Consensus       156 s~~~~~~~~G~~~g~~~g~~l  176 (438)
T PRK10133        156 NLAQTFNSFGAIIAVVFGQSL  176 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999776544

>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]

Probab=99.23  E-value=3e-10  Score=101.21  Aligned_cols=282  Identities=14%  Similarity=0.049  Sum_probs=159.3

Q ss_pred             hhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHH--HHHhHHHHH-
Q 045073            8 IMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIV--LMFGAVPAA-   84 (402)
Q Consensus         8 ~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~--f~~~~i~~~-   84 (402)
                      +..-|+|+++|..+..+-.++..+|.+++.++...+.....                 ..+...|...  |+.....+. 
T Consensus       164 iA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~-----------------~~~~~~~~~~~~f~~~~~l~~l  226 (480)
T KOG2563|consen  164 IAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSK-----------------DSEDNSWLFFTLFLGVECLAAL  226 (480)
T ss_pred             HHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCC-----------------CcchhHHHHHHHHHHHHHHHHH
Confidence            34558999999999999999999999999998887762110                 1245667764  443222222 


Q ss_pred             HHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHHHH
Q 045073           85 LTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFL  164 (402)
Q Consensus        85 ~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (402)
                      +.....+..+|.|..    ......+..                      .+....+-.++-+..   +.+++....+..
T Consensus       227 ~l~l~~~~~~~~P~t----Pps~s~~~~----------------------~~~~f~~si~~~~~n---~~F~il~~~ygi  277 (480)
T KOG2563|consen  227 LLALVLFVFTKKPPT----PPSASQAAL----------------------QDASFPKSIKSCFKN---RQFIILAICYGI  277 (480)
T ss_pred             HHHHHHHhcCCCCCC----CCchhHhhh----------------------hcCcHHHHHHHHHcC---ccHHHHHHHHhh
Confidence            222222233343321    000000000                      000011111111111   245555555555


Q ss_pred             HHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHH-HHHHHHHHHHH
Q 045073          165 LDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFII-QLGGFLLMSIC  243 (402)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~-~~~~~~~~~~~  243 (402)
                      ....+++....+...+...|++...+|.            ......+++++++.++|.+.||.+.-+. .+.......++
T Consensus       278 ~~g~F~~l~~~l~~~l~~sgY~~~~aG~------------ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~  345 (480)
T KOG2563|consen  278 GLGLFNSLSTLLNLALCPSGYEGVFAGY------------IGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVG  345 (480)
T ss_pred             hHHHHHHHHHHhhhccccccCCccccch------------hHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHH
Confidence            5556666666665455556666655454            7778888899999999999999876443 33333333333


Q ss_pred             HHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHh
Q 045073          244 MAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAG  323 (402)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g  323 (402)
                      .+.+.....   ..              ... ..+.......+++..+..|+-.-+..|..-|..-++..|+.+..+++-
T Consensus       346 ~~~l~~~t~---~~--------------~~~-viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f  407 (480)
T KOG2563|consen  346 TLMLLTCTL---FL--------------GDS-VIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIF  407 (480)
T ss_pred             HHHHHHhhc---cC--------------Cce-EehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHH
Confidence            222221111   11              111 233333334445567778888888888866666788889999999988


Q ss_pred             HHHHhHhHHhhhhccCC-c-chhhHHHHHHHHHHHhhheeeeec
Q 045073          324 AIVGAFGVQYYTQKGDK-Q-IKQSIITLAVVNFLGFLCSFMVPE  365 (402)
Q Consensus       324 ~~i~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~i~~i~~~~~~e  365 (402)
                      +++-.++.+...+..+. + +...-+.....++++.++..++++
T Consensus       408 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~  451 (480)
T KOG2563|consen  408 GVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRP  451 (480)
T ss_pred             HHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhh
Confidence            88888877777665421 2 333344445555666666666643

>PRK11902 ampG muropeptide transporter; Reviewed

Probab=99.21  E-value=4e-10  Score=104.69  Aligned_cols=175  Identities=11%  Similarity=0.062  Sum_probs=119.6

Q ss_pred             HHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhcc-----chhH-H
Q 045073          159 TSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRI-----GRFI-I  232 (402)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-----grr~-~  232 (402)
                      ...++.+...+......+|.++++.|++.++.+.            .......  .+..++.|.++||+     |||+ .
T Consensus         5 ~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~------------~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~   70 (402)
T PRK11902          5 LLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGF------------FSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGW   70 (402)
T ss_pred             HHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHH--HHHHHHHHHHHHcccccCCCcchhH
Confidence            3455566666777777889999999999998665            2222222  46667899999999     7765 6


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhh
Q 045073          233 QLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTC  312 (402)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~  312 (402)
                      +..+.++.+++...+.+...                   ....+.+..+.+...+......+...+++.|.+|+++|+++
T Consensus        71 l~~~~~~~~l~~~~l~~~~~-------------------~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~  131 (402)
T PRK11902         71 LLLTQVGLAASIAAMAFCPP-------------------HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAG  131 (402)
T ss_pred             HHHHHHHHHHHHHHHHhcCc-------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHH
Confidence            77766666666665544210                   12222223222222333444556677889999999999999


Q ss_pred             hhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeeccC
Q 045073          313 HGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETN  367 (402)
Q Consensus       313 ~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~  367 (402)
                      .++......+|..+++.+.+.+.+... +|+..|++.+++.++..+..++.||++
T Consensus       132 ~~~~~~g~~~g~i~g~~l~~~l~~~~~-gw~~~f~i~a~~~l~~~l~~~~~~e~~  185 (402)
T PRK11902        132 AAVKVLGYRLAMLVSGGLALWLADRVL-GWGNTYLLMAGLMLAGALTTLWAPEPE  185 (402)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHhccc-CHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence            999999889999999988887776422 899999998887776655544556654

>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]

Probab=99.20  E-value=1.1e-10  Score=112.25  Aligned_cols=138  Identities=20%  Similarity=0.239  Sum_probs=115.8

Q ss_pred             HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073          205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT  284 (402)
Q Consensus       205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (402)
                      ..++..++.++|+++.|.++||+|||++++.+.++..++.+..++                      ...+...+++.++
T Consensus       123 ~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~----------------------a~~~~~~~~~Rfl  180 (521)
T KOG0255|consen  123 GQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAF----------------------APNYWMFLIFRFL  180 (521)
T ss_pred             HHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHH----------------------hCcHHHHHHHHHH
Confidence            677888999999999999999999999999999998888877666                      3445666666777


Q ss_pred             HHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeee
Q 045073          285 LFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVP  364 (402)
Q Consensus       285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~  364 (402)
                      .+++..+...+.+.+.+|+++++.|+.+..+ ....+.++.+++...+++..    +|++.+++..+..++.+++.++.|
T Consensus       181 ~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~----~Wr~~~~~~~~~~~~~~~~~~l~~  255 (521)
T KOG0255|consen  181 SGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR----DWRWLFWIISIPSGLFLLLWFLPP  255 (521)
T ss_pred             HHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHHHHccC
Confidence            7777777778899999999999999999999 88888899999988888887    899999998888887777744446


Q ss_pred             ccCCc
Q 045073          365 ETNGL  369 (402)
Q Consensus       365 et~~~  369 (402)
                      |+++.
T Consensus       256 Es~rw  260 (521)
T KOG0255|consen  256 ESPRW  260 (521)
T ss_pred             cChHH
Confidence            87543

>TIGR00806 rfc RFC reduced folate carrier

Probab=99.20  E-value=5.2e-10  Score=101.87  Aligned_cols=72  Identities=10%  Similarity=0.083  Sum_probs=56.5

Q ss_pred             cchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHh---H
Q 045073            4 LSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFG---A   80 (402)
Q Consensus         4 ~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~---~   80 (402)
                      +...++..|+|+++|+++.++...+..+|.+++++++.++                        ..+|||+.+.+.   .
T Consensus       134 A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll------------------------~s~gWr~y~~Ln~Isl  189 (511)
T TIGR00806       134 AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL------------------------VTLGWISYSTLNIISL  189 (511)
T ss_pred             HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------HhcCchhHHHHHHHHH
Confidence            5678999999999999999999999999999999999984                        346788876553   3


Q ss_pred             HHHHHHHHHHhhccCCchh
Q 045073           81 VPAALTYYWRMKMPETARY   99 (402)
Q Consensus        81 i~~~~~~~~~~~~pesp~~   99 (402)
                      ....+.+++.+++|..++-
T Consensus       190 ~s~~~a~~~a~~LP~~~~s  208 (511)
T TIGR00806       190 VFMTFSVFLALFLKRPKRS  208 (511)
T ss_pred             HHHHHHHHHHHhCCCCchh
Confidence            3334556667788865553

Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.

>PRK09528 lacY galactoside permease; Reviewed

Probab=99.18  E-value=5.7e-10  Score=104.34  Aligned_cols=176  Identities=9%  Similarity=-0.082  Sum_probs=105.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073          155 LLGTTSTWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ  233 (402)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~  233 (402)
                      ++......++..........+.|.++++ +|++..+.+.            ......++..++.++.|+++||+|||+.+
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~------------~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~   79 (420)
T PRK09528         12 YWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGI------------IFSANSLFALLFQPLYGLISDKLGLKKHL   79 (420)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCchHHH
Confidence            3344444444445555666777777766 8999987766            78888899999999999999999999998


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccc--cchhhh
Q 045073          234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFP--ARLRST  311 (402)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p--~~~r~~  311 (402)
                      ..+..+.++.......... ...               .. ................+. ........+..+  .+.++.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~-~~~---------------~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~  141 (420)
T PRK09528         80 LWIISGLLVLFGPFFIYVF-APL---------------LQ-YNILLGAIVGGIYLGFGF-LAGAGAIEAYIERVSRRSGF  141 (420)
T ss_pred             HHHHHHHHHHHHHHHHHHH-HHH---------------HH-HHHHHHHHHHHHHhhhhh-ccchhhhhhHHHHHHhhccc
Confidence            8765554433322111100 000               00 000000011111111111 111111122222  244667


Q ss_pred             hhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073          312 CHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV  363 (402)
Q Consensus       312 ~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~  363 (402)
                      ..|.......+|..++|.+.+.+.+.   +++.+|++.+++.++..++.++.
T Consensus       142 ~~g~~~~~~~~g~~i~~~~~g~l~~~---~~~~~f~~~~~~~~~~~~~~~~~  190 (420)
T PRK09528        142 EYGRARMWGSLGWALCAFIAGILFNI---NPQINFWLGSGSALILLVLLFFA  190 (420)
T ss_pred             cchhhHHhhhHHHHHHHHHHHHHHhc---CchHhHHHHHHHHHHHHHHHhcc
Confidence            78888888999999999999988764   78888888887777766666554

>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter

Probab=99.14  E-value=2e-09  Score=100.25  Aligned_cols=195  Identities=14%  Similarity=0.039  Sum_probs=119.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhh----ccch
Q 045073          154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLID----RIGR  229 (402)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~d----r~gr  229 (402)
                      +++.++...+...+.+.....+.+.+++++|.+....+.            ......+..++..++.|+++|    |+||
T Consensus         5 ~li~~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~------------i~~~~~l~~~i~~Pi~G~lSDr~~sr~GR   72 (477)
T TIGR01301         5 KLLRVASVAAGVQFGWALQLSLLTPYVQELGIPHAWASI------------IWLCGPLSGLLVQPLVGYLSDRCTSRFGR   72 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHhHeeehhcCCCCCCCC
Confidence            455555666666666666677777788889998876554            677777888888999999999    5999


Q ss_pred             hHHHHHH-HHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchH---HHHHHHHHHHHHHhhCCccccccccccccc
Q 045073          230 FIIQLGG-FLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHA---WFMILYGLTLFFANFGPNSTTFIVPAELFP  305 (402)
Q Consensus       230 r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p  305 (402)
                      |+.++.+ .....+++.++............+.     +  .+....   ..+..+.+.. +......+...++++|..|
T Consensus        73 Rrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~-----~--~~~~~~~i~~~~i~~~lld-~~~n~~~~p~rALiaDl~p  144 (477)
T TIGR01301        73 RRPFIAAGAALVAFAVILIGFAADIGHLFGDNL-----D--KKTKPRAIIVFVVGFWILD-VANNMLQGPCRAFLADLTG  144 (477)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCchhhhhccccc-----c--ccchhHHHHHHHHHHHHHH-HHHHHHHHHHHHhcccccC
Confidence            9988765 4444444444433211000000000     0  001111   1111111221 2222233345678999999


Q ss_pred             cchh--hhhhhHHHHHHHHhHHHHhHhHHhhh--hcc-----------CCcchhhHHHHHHHHHHHhhheee-eeccCC
Q 045073          306 ARLR--STCHGISAAAGKAGAIVGAFGVQYYT--QKG-----------DKQIKQSIITLAVVNFLGFLCSFM-VPETNG  368 (402)
Q Consensus       306 ~~~r--~~~~~~~~~~~~~g~~i~~~~~~~~~--~~~-----------~~~~~~~~~~~~~~~~i~~i~~~~-~~et~~  368 (402)
                      ++.|  +.+.++.+....+|+++++.+.+...  +..           ..+.+..|++.+++.+++.++..+ .+|...
T Consensus       145 ~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~  223 (477)
T TIGR01301       145 GDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPL  223 (477)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCC
Confidence            8865  57889999999999999998776541  111           015667888888888777776664 488643

This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.

>TIGR00883 2A0106 metabolite-proton symporter

Probab=99.13  E-value=1e-09  Score=101.47  Aligned_cols=145  Identities=19%  Similarity=0.151  Sum_probs=95.8

Q ss_pred             HHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHH
Q 045073          206 FLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTL  285 (402)
Q Consensus       206 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (402)
                      .....+...++.++.|+++||+|||+.+..+.++..++.++...........              ......+.+..+..
T Consensus        41 ~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~r~l~  106 (394)
T TIGR00883        41 FAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIG--------------IWAPILLLLARLIQ  106 (394)
T ss_pred             HHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhH--------------HHHHHHHHHHHHHH
Confidence            3444455567888999999999999999999888887776665532100000              00001222333333


Q ss_pred             HHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhh--------ccCCcchhhHHHHHHHHHHHh
Q 045073          286 FFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQ--------KGDKQIKQSIITLAVVNFLGF  357 (402)
Q Consensus       286 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~i~~  357 (402)
                      +.+.....+....++.|.+|++.|+...++......+|..+++.+...+..        ..  +|+..|.+.+++.+++.
T Consensus       107 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~--~w~~~~~~~~~~~~~~~  184 (394)
T TIGR00883       107 GFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEW--GWRIPFLVSAVLVLIGL  184 (394)
T ss_pred             HhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhcc--chHHHHHHHHHHHHHHH
Confidence            333344455667789999999999999999999999999988877655432        22  78888887776666655


Q ss_pred             hheeeeecc
Q 045073          358 LCSFMVPET  366 (402)
Q Consensus       358 i~~~~~~et  366 (402)
                      .+....||+
T Consensus       185 ~~~~~~~~~  193 (394)
T TIGR00883       185 YLRRNLEET  193 (394)
T ss_pred             HHHHhcCCC
Confidence            444344554

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.

>TIGR00901 2A0125 AmpG-related permease

Probab=99.13  E-value=7e-10  Score=101.36  Aligned_cols=159  Identities=12%  Similarity=0.023  Sum_probs=105.2

Q ss_pred             HhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhcc-----chhHHH-HHHHHHHHHHHHH
Q 045073          173 NLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRI-----GRFIIQ-LGGFLLMSICMAI  246 (402)
Q Consensus       173 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-----grr~~~-~~~~~~~~~~~~~  246 (402)
                      ....|.+.++.|++.++.+.            .... .+...+ .++.|.++||+     |||+.+ +.+.+..+++...
T Consensus         8 ~~~~~~~~~~~g~s~~~~g~------------~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~   73 (356)
T TIGR00901         8 GNTLPYWLRSKNVSLKTIGF------------FSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLI   73 (356)
T ss_pred             HhHHHHHHHHcCCCHHHHHH------------HHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHH
Confidence            34567888899999887554            2222 222222 66899999998     888864 5555555555444


Q ss_pred             HHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHH
Q 045073          247 LGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIV  326 (402)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i  326 (402)
                      +++..    .               ....+.+....+..........+...+++.|.+|++.|+.+.++......+|.++
T Consensus        74 l~~~~----~---------------~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~  134 (356)
T TIGR00901        74 LSFLV----P---------------STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLL  134 (356)
T ss_pred             HHcCC----c---------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHH
Confidence            43321    0               1122222222222233333344566778899999999999999999999999999


Q ss_pred             HhHhHHhhhhccCCc--------chhhHHHHHHHHHHHhhheee-eecc
Q 045073          327 GAFGVQYYTQKGDKQ--------IKQSIITLAVVNFLGFLCSFM-VPET  366 (402)
Q Consensus       327 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~i~~i~~~~-~~et  366 (402)
                      ++.+.+.+....  +        |+.+|++.+++.++..+..++ .||.
T Consensus       135 ~~~l~~~l~~~~--g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~  181 (356)
T TIGR00901       135 SGSLALVLASPE--FANTGLITLWGYIFFWTALLILPGLLVTLFLAKEP  181 (356)
T ss_pred             HHHHHHHHhhhc--ccccccccccHHHHHHHHHHHHHHHHHHHHhccCC
Confidence            999988887766  5        999999988887776665554 3664

>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]

Probab=99.12  E-value=1.8e-10  Score=100.71  Aligned_cols=136  Identities=20%  Similarity=0.202  Sum_probs=117.5

Q ss_pred             HHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHH
Q 045073          204 AMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGL  283 (402)
Q Consensus       204 ~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (402)
                      ++.....+.+++.+.+.|.+.||+|+|..+++|++.+..+.+++++                      .+...+..+...
T Consensus       110 ~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFaf----------------------g~sy~~l~vAR~  167 (464)
T KOG3764|consen  110 LLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAF----------------------GNSYPMLFVARS  167 (464)
T ss_pred             HHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHH----------------------cchhHHHHHHHH
Confidence            3778889999999999999999999999999999999999988888                      444556666666


Q ss_pred             HHHHHhhCCccccccccccccccch-hhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheee
Q 045073          284 TLFFANFGPNSTTFIVPAELFPARL-RSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFM  362 (402)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~e~~p~~~-r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~  362 (402)
                      ..+.+.........+++++.||.+. |++++|+...+..+|-.+||.+.+.+.+..  |...+|.+.++++++...+.++
T Consensus       168 LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~--Gk~aPFlVL~~v~Lld~~L~l~  245 (464)
T KOG3764|consen  168 LQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFA--GKSAPFLVLAIVLLLDGALQLL  245 (464)
T ss_pred             HhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhc--CCcCcHHHHHHHHHHHHHHHHh
Confidence            6666555555677889999999866 799999999999999999999999999988  8999999999999988888776


Q ss_pred             e
Q 045073          363 V  363 (402)
Q Consensus       363 ~  363 (402)
                      +
T Consensus       246 v  246 (464)
T KOG3764|consen  246 V  246 (464)
T ss_pred             e
Confidence            5

>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon

Probab=99.11  E-value=2.7e-08  Score=88.60  Aligned_cols=272  Identities=15%  Similarity=0.076  Sum_probs=150.8

Q ss_pred             hhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH---
Q 045073            6 AVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP---   82 (402)
Q Consensus         6 ~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~---   82 (402)
                      .++++|..|+++|+++.++...+.-+|.+++..+.+.+..                      +...=|..-.+..+.   
T Consensus       111 lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~----------------------~~s~~rL~~v~~~~a~i~  168 (403)
T PF03209_consen  111 LALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLD----------------------PFSPERLIQVIQGVALIA  168 (403)
T ss_pred             HHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHcc----------------------ccCHHHHHHHHHHHHHHH
Confidence            5788999999999999999999999999999998887762                      222234433332222   


Q ss_pred             HHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHH
Q 045073           83 AALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTW  162 (402)
Q Consensus        83 ~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (402)
                      .++.++..+. .|.++-  .....++                         +++....+.+++-...++.++++...   
T Consensus       169 ~~l~~ia~wg-~E~r~~--~~~~~~~-------------------------~~~~~f~~a~~~~~~~~~a~~f~~fl---  217 (403)
T PF03209_consen  169 LLLNLIALWG-QEPRRS--RRAAAAE-------------------------RPRPPFREAWRQVWASPQARRFFVFL---  217 (403)
T ss_pred             HHHHHHHHHh-cccCCc--ccccCCC-------------------------CCCccHHHHHHHHHhCCChhHHHHHH---
Confidence            2222222222 222111  0000000                         11111111111111111112222222   


Q ss_pred             HHHHHHHHHHHhhhhhhh-hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhh-ccchhHHHHHHHHHH
Q 045073          163 FLLDIAFYTINLAQKDIY-PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLID-RIGRFIIQLGGFLLM  240 (402)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~d-r~grr~~~~~~~~~~  240 (402)
                      +.....++.....+-.|- +-+|++..+...            ++.....+.++|..+.+++.. |.++++...+++...
T Consensus       218 ~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~------------Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~  285 (403)
T PF03209_consen  218 FLGTLAFFMQDVILEPYGGEVFGMSVGETTR------------LTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLG  285 (403)
T ss_pred             HHHHHHHHhhHHHcCCchhHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHH
Confidence            222234444444333333 448888887665            777777888888888887766 678888877888777


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHH
Q 045073          241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAG  320 (402)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~  320 (402)
                      .+++.++......                  .+.+.+..... ..+++.........+...++..++..|+.+|.....+
T Consensus       286 ~~~f~lii~a~~~------------------~~~~~~~~~~~-l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQ  346 (403)
T PF03209_consen  286 ALAFALIILAGPL------------------GSPWLFRPGVF-LLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQ  346 (403)
T ss_pred             HHHHHHHHHHHhc------------------ccchHHHHHHH-HHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHH
Confidence            7777666554321                  11112222111 1121111111223445567777888899999988888


Q ss_pred             HHhHHHHhHhHHhhhhcc----C--C--cchhhHHHHHHHHHHHhhhee
Q 045073          321 KAGAIVGAFGVQYYTQKG----D--K--QIKQSIITLAVVNFLGFLCSF  361 (402)
Q Consensus       321 ~~g~~i~~~~~~~~~~~~----~--~--~~~~~~~~~~~~~~i~~i~~~  361 (402)
                      .+...++.++.+.+.|..    +  .  +|..+|.+-++..+++.++..
T Consensus       347 A~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~  395 (403)
T PF03209_consen  347 AIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLLG  395 (403)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence            888888887777766532    1  1  566777777777666665544

It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.

>TIGR00896 CynX cyanate transporter

Probab=99.10  E-value=1.1e-09  Score=99.99  Aligned_cols=150  Identities=15%  Similarity=0.089  Sum_probs=103.6

Q ss_pred             HHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHH
Q 045073          171 TINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGAR  250 (402)
Q Consensus       171 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~  250 (402)
                      .....+|.+.+++|.+..+.+.            ......++..++.++.|+++||+|||+.+..+.++..++.+.. ..
T Consensus        18 ~~~~~lp~l~~~~~~s~~~~g~------------~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~   84 (355)
T TIGR00896        18 SVGPLLPQIRSALGMSFSVAGL------------LTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SA   84 (355)
T ss_pred             cCcccHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hh
Confidence            3455678888999999887666            7788888999999999999999999999998876665554433 11


Q ss_pred             hhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHh
Q 045073          251 YDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFG  330 (402)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~  330 (402)
                                           .+. ..+.+.....+.+.....+....++.|.+| +.|+++.++.+....+|..+++.+
T Consensus        85 ---------------------~~~-~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~  141 (355)
T TIGR00896        85 ---------------------PGT-ALLFAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAA  141 (355)
T ss_pred             ---------------------ccH-HHHHHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHH
Confidence                                 122 222222322222222223344456678776 579999999999999999999988


Q ss_pred             HHhhhhccCCcchhhHHHHHHHHHHH
Q 045073          331 VQYYTQKGDKQIKQSIITLAVVNFLG  356 (402)
Q Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~~~i~  356 (402)
                      .+.+.+..+.+|+..|.+.+++.++.
T Consensus       142 ~~~l~~~~~~~w~~~f~~~~~~~~~~  167 (355)
T TIGR00896       142 TVPLAQHSGGHWQQALAWWALPALLA  167 (355)
T ss_pred             HHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence            88777654214777777666554443

This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.

>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=99.10  E-value=5.1e-09  Score=97.49  Aligned_cols=137  Identities=13%  Similarity=0.105  Sum_probs=114.5

Q ss_pred             HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073          205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT  284 (402)
Q Consensus       205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (402)
                      +......+.+++.+.+|++.||+|-|+++..+.++.+++.++......                   .+. ..+++..++
T Consensus        78 i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~-------------------~~~-~~~~~~R~l  137 (466)
T KOG2532|consen   78 IFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAAS-------------------IGF-YLLLVLRFL  137 (466)
T ss_pred             HHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHH-------------------hcc-hhhHHHHHH
Confidence            677778889999999999999999999999999999888888777643                   121 245566666


Q ss_pred             HHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhc-cCCcchhhHHHHHHHHHHHhhheeee
Q 045073          285 LFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQK-GDKQIKQSIITLAVVNFLGFLCSFMV  363 (402)
Q Consensus       285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~i~~~~~  363 (402)
                      .+.......|....+.+...|+++|++..++......+|.+++-.+.|.+.+. .  ||+.+|++.+++.++..++.+++
T Consensus       138 qGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~--GW~sifY~~g~~g~i~~~~w~~~  215 (466)
T KOG2532|consen  138 QGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSL--GWPSIFYVFGIVGLIWFILWFLF  215 (466)
T ss_pred             hHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCC--CCchHHHHHHHHHHHHHHHHHHH
Confidence            66666667788888999999999999999999999999999999899998887 5  99999999999998877766544

>PRK15462 dipeptide/tripeptide permease D; Provisional

Probab=99.10  E-value=3.6e-08  Score=92.38  Aligned_cols=64  Identities=14%  Similarity=0.203  Sum_probs=52.0

Q ss_pred             CcchhhhhhccCcc--cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhH
Q 045073            3 PLSAVIMSEYANKR--TRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGA   80 (402)
Q Consensus         3 ~~~~~~i~e~~~~~--~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~   80 (402)
                      +...++++|.+|++  +|....++...+.++|..++|.+.+++.                       +..|||+.|.+++
T Consensus       119 ~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~-----------------------~~~Gw~~~F~iaa  175 (493)
T PRK15462        119 SNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQ-----------------------EEYSWAMGFGLAA  175 (493)
T ss_pred             ccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHH-----------------------hhhChHHHHHHHH
Confidence            44568899999875  7999999999999999999999999986                       5678999999876


Q ss_pred             HHHHHHHHH
Q 045073           81 VPAALTYYW   89 (402)
Q Consensus        81 i~~~~~~~~   89 (402)
                      +..++.++.
T Consensus       176 igm~l~li~  184 (493)
T PRK15462        176 VGMIAGLVI  184 (493)
T ss_pred             HHHHHHHHH
Confidence            544444333

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated

Probab=99.10  E-value=3.5e-09  Score=111.75  Aligned_cols=114  Identities=12%  Similarity=0.013  Sum_probs=85.0

Q ss_pred             HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073          205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT  284 (402)
Q Consensus       205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (402)
                      ......++.+++.+++|+++||+|||++++.+.++..+..++..+...                   ......+++..++
T Consensus        52 ~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~-------------------~~~~~~l~~~r~l  112 (1146)
T PRK08633         52 VNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYY-------------------LGWFWLAFAVTFL  112 (1146)
T ss_pred             HHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHH-------------------HccHHHHHHHHHH
Confidence            566677778888899999999999999998887665555444433221                   1122334444444


Q ss_pred             HHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhc
Q 045073          285 LFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQK  337 (402)
Q Consensus       285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~  337 (402)
                      .+.+.....+...+++.|.+|++.|+.++|+......+|.++++.+.+.+...
T Consensus       113 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~  165 (1146)
T PRK08633        113 LGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFES  165 (1146)
T ss_pred             HHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence            44444555667788999999999999999999999999999999999888765

>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins

Probab=99.10  E-value=7.1e-10  Score=104.89  Aligned_cols=156  Identities=13%  Similarity=0.043  Sum_probs=103.0

Q ss_pred             HHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 045073          168 AFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAIL  247 (402)
Q Consensus       168 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~  247 (402)
                      ........++.+..++|-++...-             +.....++..++.++.|+++|.+|||..++.+.++..++.++.
T Consensus        59 ~~~~~a~~l~~I~~diG~~~~~~w-------------~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~  125 (599)
T PF06609_consen   59 VLVLPASILPYINADIGGSDNWSW-------------FSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVC  125 (599)
T ss_pred             HHhccHHHHHHHHHhcCCCccchH-------------HHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHh
Confidence            333334445667778887654322             4455667777788899999999999999999999888888777


Q ss_pred             HHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHH
Q 045073          248 GARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVG  327 (402)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~  327 (402)
                      +..                      .....++....+.+. +.+........++|+.|.+.|..+.++.....-....++
T Consensus       126 atA----------------------~~~~~~iag~~l~Gv-gaG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~  182 (599)
T PF06609_consen  126 ATA----------------------QNMNTFIAGMVLYGV-GAGVQELAALAISELVPNKWRGLGLAIASIPFIITTWIS  182 (599)
T ss_pred             hcC----------------------CcHHHHHHHHHHHHH-hhHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhccc
Confidence            653                      122222222222222 223333445567999999999988877765544444466


Q ss_pred             hHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee
Q 045073          328 AFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF  361 (402)
Q Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~  361 (402)
                      +.+...+....  +||+.|++.++...++++..+
T Consensus       183 ~~ia~~~~~~~--~WRw~~~~~~i~~~i~~vl~~  214 (599)
T PF06609_consen  183 PLIAQLFAAHS--GWRWIFYIFIIWSGIALVLIF  214 (599)
T ss_pred             HHHHHHhccCC--CcchHHHHHHHHHHHHHHHHH
Confidence            66665554443  899999999888777765544

Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional

Probab=99.10  E-value=3.5e-09  Score=111.44  Aligned_cols=142  Identities=11%  Similarity=-0.002  Sum_probs=97.8

Q ss_pred             HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073          205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT  284 (402)
Q Consensus       205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (402)
                      ......+..++..+++|+++||+|||+++.....+..+..........                   ....+.+++..++
T Consensus        57 ~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~-------------------~~s~~~l~~~~~l  117 (1140)
T PRK06814         57 AGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFH-------------------LNSVPLLFAALFL  117 (1140)
T ss_pred             HHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHH-------------------HhhHHHHHHHHHH
Confidence            555666777888889999999999999764322222221111111111                   1123344444455


Q ss_pred             HHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeee
Q 045073          285 LFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVP  364 (402)
Q Consensus       285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~  364 (402)
                      .+.+.....+...+++.+++|++.|+.++|+.++...+|.++||.+.+.+....  +|+..|+..+++.++++++.+++|
T Consensus       118 ~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  195 (1140)
T PRK06814        118 MGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISG--NFVILVALLMGIAVLGWLASLFIP  195 (1140)
T ss_pred             HHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhcc--ccHHHHHHHHHHHHHHHHHHhhCC
Confidence            555555567788899999999999999999999999999999999999998876  888887555555555555555666


Q ss_pred             ccC
Q 045073          365 ETN  367 (402)
Q Consensus       365 et~  367 (402)
                      +++
T Consensus       196 ~~~  198 (1140)
T PRK06814        196 KTG  198 (1140)
T ss_pred             CCC
Confidence            553

>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs)

Probab=99.09  E-value=1.5e-11  Score=116.66  Aligned_cols=314  Identities=11%  Similarity=0.116  Sum_probs=0.0

Q ss_pred             CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCc----hhHHHHH
Q 045073            2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDY----LWRIVLM   77 (402)
Q Consensus         2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~Wr~~f~   77 (402)
                      |+++.+|+-|..++++-+.++|+......+|.++|.++++.+.+.+-+....+..    .... ...+.    .|..-|+
T Consensus       159 ~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~----~~~i-~p~dp~WvGAWWLGfl  233 (539)
T PF03137_consen  159 YTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPD----GVGI-TPSDPRWVGAWWLGFL  233 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCcccccc----CCCC-CCCCccHHHHHHHHHH
Confidence            5788999999999999999999999999999999999999887654322111100    0000 01222    3555555


Q ss_pred             HhHHHHHHHHHHHhhccCC-chhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhh-hhhHHH
Q 045073           78 FGAVPAALTYYWRMKMPET-ARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQ-KHGLHL  155 (402)
Q Consensus        78 ~~~i~~~~~~~~~~~~pes-p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  155 (402)
                      +.++..++..+..+++|+. |..    ++.++++  +..+....+.+++..+.++..+......+.+.+..++ -..+.+
T Consensus       234 i~g~~~~l~aipl~~FPk~lp~~----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f  307 (539)
T PF03137_consen  234 ICGILLFLSAIPLFFFPKKLPGT----SERQEEK--ESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVF  307 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHcCCccCCCc----ccccchh--hhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHH
Confidence            5554445444444455543 211    0000000  0000000000000000000000000111111111111 111355


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccc--hhHH
Q 045073          156 LGTTSTWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIG--RFII  232 (402)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g--rr~~  232 (402)
                      +...+..........+...|.|.|++. ++.++..+..           +...+...+.++|.+++|+++.|++  .|..
T Consensus       308 ~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~-----------l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~  376 (539)
T PF03137_consen  308 MCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASL-----------LTGIVSIPGAALGILLGGYIVKKFKLSARGA  376 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-----------HHhhhhcchhheehheEEEEEEEecCcHHHH
Confidence            566666666667777888999999975 8888776544           1334445567788889999999975  3444


Q ss_pred             HHHHHHHHHHHHHH---HHHHhhc--------ccC--CCCCCCC----------------CCCccccCCc----hHHHHH
Q 045073          233 QLGGFLLMSICMAI---LGARYDS--------LRG--KKCDPKK----------------DPLHEYCDGN----HAWFMI  279 (402)
Q Consensus       233 ~~~~~~~~~~~~~~---~~~~~~~--------~~~--~~~~~~~----------------~~~~~~~~~~----~~~~~~  279 (402)
                      +....+...++.+.   ..+....        ...  .......                ....+.|+.+    ...+++
T Consensus       377 ~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~  456 (539)
T PF03137_consen  377 AKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLI  456 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHH
Confidence            44444333333332   1111100        000  0000000                0023444444    222223


Q ss_pred             HHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHH-hHHHHhHhHHhhhhcc
Q 045073          280 LYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKA-GAIVGAFGVQYYTQKG  338 (402)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~-g~~i~~~~~~~~~~~~  338 (402)
                      +..+..+.......| ....+-...|++.|+.+.|+...+.++ |.+-+|.++|.+.|..
T Consensus       457 ~~~~~~~~~~~~~~p-~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~t  515 (539)
T PF03137_consen  457 LLFILSFFTFMSQVP-STLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDST  515 (539)
T ss_dssp             ------------------------------------------------------------
T ss_pred             HHHHHHHHHHhcccc-hheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence            322222322333333 333455778999999999999988775 6678999999998853

Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.

>PRK15011 sugar efflux transporter B; Provisional

Probab=99.08  E-value=4.3e-09  Score=97.44  Aligned_cols=174  Identities=12%  Similarity=0.037  Sum_probs=102.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhh-hhcCcchhhhhhhhHHHHHHHhHHHHH-HHHhhhhhhhhhHHHhhhccchhHHHH
Q 045073          157 GTTSTWFLLDIAFYTINLAQKDIY-PATGIVRKAAAMDAIEEVFRISKAMFL-VALFATVPGYWFTVFLIDRIGRFIIQL  234 (402)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~g~l~dr~grr~~~~  234 (402)
                      ......+.............|.++ +++|.+..+.+.            ... ...++.+.+.+.+++ .||+|||+.++
T Consensus        19 ~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~------------~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~   85 (393)
T PRK15011         19 AFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGF------------FFTGSAVIGILVSQFLAGR-SDKRGDRKSLI   85 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHH-HhcccchhHHH
Confidence            333334444445555555566655 568988887554            322 334445555556666 99999998754


Q ss_pred             -HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhh--h
Q 045073          235 -GGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRS--T  311 (402)
Q Consensus       235 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~--~  311 (402)
                       .+.+..+++.++....                     . ....+.+......+......+....+..+..+++.|.  .
T Consensus        86 ~~~~~~~~~~~~~~~~~---------------------~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (393)
T PRK15011         86 VFCCLLGVLACTLFAWN---------------------R-NYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVM  143 (393)
T ss_pred             HHHHHHHHHHHHHHHHh---------------------h-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHH
Confidence             4444433444333332                     1 1222222222222222333445555666666655443  3


Q ss_pred             hhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeeccC
Q 045073          312 CHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPETN  367 (402)
Q Consensus       312 ~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~  367 (402)
                      ..++.+....+|.+++|.+.+.+.+..  +|+..|++.++..++..+..+ ++||.+
T Consensus       144 ~~~~~~~~~~lg~~~g~~i~~~l~~~~--gw~~~f~~~~~~~~~~~~~~~~~~~~~~  198 (393)
T PRK15011        144 FSSFLRAQVSLAWVIGPPLAYALAMGF--SFTVMYLSAAVAFIVCGVMVWLFLPSMR  198 (393)
T ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHHhc--ChHHHHHHHHHHHHHHHHHHHhhcCccC
Confidence            346777788899999999999998877  999999988887776655544 457653

>TIGR00882 2A0105 oligosaccharide:H+ symporter

Probab=99.08  E-value=2.3e-09  Score=99.42  Aligned_cols=177  Identities=11%  Similarity=-0.090  Sum_probs=107.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073          155 LLGTTSTWFLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ  233 (402)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~  233 (402)
                      ++......++..........+.|.++. ++|.+..+.+.            ......+...++.++.|+++||+|||+.+
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~------------~~~~~~l~~~i~~~~~G~l~Dr~grr~~~   71 (396)
T TIGR00882         4 FWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGI------------VFSCISLFSILFQPLFGLISDKLGLKKHL   71 (396)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCcHHHH
Confidence            444555555555566666667777775 47998887665            77888889999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073          234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH  313 (402)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~  313 (402)
                      +.+....++...............              ........+..+..+.......+....+..+..  +.++...
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~  135 (396)
T TIGR00882        72 LWIISGLLVLFAPFFIYVFGPLLQ--------------SNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEY  135 (396)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhHHH--------------HHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhccccc
Confidence            877655544333221111000000              001111111122222222222333333333332  2334566


Q ss_pred             hHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheee
Q 045073          314 GISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFM  362 (402)
Q Consensus       314 ~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~  362 (402)
                      |.....+.+|..++|.+.+.+.+.   +|+..|++.+++.++..++.+.
T Consensus       136 g~~~~~~~~g~~~g~~~~g~l~~~---~~~~~f~~~~~~~~~~~~~~~~  181 (396)
T TIGR00882       136 GKARMFGCVGWALCASIAGILFSI---DPQIVFWLGSGFALILMLLLMF  181 (396)
T ss_pred             chhhhhcccHHHHHHHHHhhhhcc---CchHHHHHHHHHHHHHHHHHHH
Confidence            777788889999999998877654   8889998888777766655544

>PRK11128 putative 3-phenylpropionic acid transporter; Provisional

Probab=99.07  E-value=6.6e-09  Score=95.86  Aligned_cols=165  Identities=10%  Similarity=0.015  Sum_probs=103.4

Q ss_pred             HHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHH
Q 045073          166 DIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMA  245 (402)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~  245 (402)
                      .........++|.+.++.|.+..+.+.            ......+..+++.++.|.++||+|||....-..........
T Consensus        17 ~~~~g~~~p~l~~~l~~~g~s~~~iG~------------~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~   84 (382)
T PRK11128         17 FFAYGVFLPFWSVWLKGQGYTPETIGL------------LLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFA   84 (382)
T ss_pred             HHHHHHHhhhHHHHHHhcCCCHHHHHH------------HHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHH
Confidence            344555666778899999999887766            67777888888899999999999984321111111111111


Q ss_pred             HHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHH
Q 045073          246 ILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAI  325 (402)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~  325 (402)
                       +.....                   .+..+.+.+.....+.......+...++..+.  .+.|+.+.+.....+.+|..
T Consensus        85 -~~~~~~-------------------~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~  142 (382)
T PRK11128         85 -VAFWFG-------------------AHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFV  142 (382)
T ss_pred             -HHHHHh-------------------cccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHH
Confidence             111110                   12223333333333333334445555555544  35678888999999999999


Q ss_pred             HHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeecc
Q 045073          326 VGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPET  366 (402)
Q Consensus       326 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et  366 (402)
                      ++|.+.+.+.+..  +|+..|++.++..++..+...+.||.
T Consensus       143 igp~lgg~l~~~~--g~~~~f~~~~~~~~~~~~~~~~~~~~  181 (382)
T PRK11128        143 IGSALTGKLVSWF--GEQAILWILTAGVASMLLGQLLRPTI  181 (382)
T ss_pred             HHHHHHHHHHHHc--ChhHHHHHHHHHHHHHHHHHHccCCC
Confidence            9999999999887  89988887776555544443334543

>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters

Probab=99.05  E-value=1.3e-11  Score=116.54  Aligned_cols=145  Identities=19%  Similarity=0.196  Sum_probs=107.3

Q ss_pred             HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073          205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT  284 (402)
Q Consensus       205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (402)
                      ......++.++|+++.|+++||+|||+.+..+.++..++.++..+...                   ......+.+..++
T Consensus        51 ~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~-------------------~~~~~~~~~~R~~  111 (451)
T PF00083_consen   51 LTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPS-------------------YNNFWMLLIGRFL  111 (451)
T ss_pred             HHHHHHhhhccccccccccccccccccccccccccccccccccccccc-------------------ccccccccccccc
Confidence            677788999999999999999999999999998888888777666421                   0122344444444


Q ss_pred             HHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccC-CcchhhHHHHHHHHHHHhhheeee
Q 045073          285 LFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGD-KQIKQSIITLAVVNFLGFLCSFMV  363 (402)
Q Consensus       285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~i~~~~~  363 (402)
                      .+++..+..+....++.|..|++.|+...++.+....+|..++..+........+ ..|+..+.+.++..++..+..+++
T Consensus       112 ~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~  191 (451)
T PF00083_consen  112 IGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFL  191 (451)
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            5555555667788899999999999999999988888888777765544322221 158888888888877777777777


Q ss_pred             eccCC
Q 045073          364 PETNG  368 (402)
Q Consensus       364 ~et~~  368 (402)
                      ||+.+
T Consensus       192 pESP~  196 (451)
T PF00083_consen  192 PESPR  196 (451)
T ss_pred             ccccc
Confidence            99743

Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane

>TIGR00902 2A0127 phenyl proprionate permease family protein

Probab=99.03  E-value=1.3e-08  Score=93.92  Aligned_cols=159  Identities=15%  Similarity=0.035  Sum_probs=100.7

Q ss_pred             HHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHH
Q 045073          160 STWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL  239 (402)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~  239 (402)
                      ..++.....+.....++|.++++.|.+..+.+.            ......+...++.++.+.++||+||+.........
T Consensus        11 ~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~------------~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~   78 (382)
T TIGR00902        11 LGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGL------------LIGAALIARFAGGLFFAPLIKDANHIIIALRLLAL   78 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence            334444444455666788999999999887665            66677788888888999999999986443222211


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH
Q 045073          240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA  319 (402)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~  319 (402)
                      ......+ .....                   .+..+...+.....+.+.....+...++..+  +.+.|+...|.....
T Consensus        79 ~~~l~~~-~~~~~-------------------~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~--~~~~~~~~~g~~~~~  136 (382)
T TIGR00902        79 ASAIFAA-AFSAG-------------------AHNAWLLFIAIGLFALFFSAGMPIGDALANT--WQKQFGLDYGKVRLI  136 (382)
T ss_pred             HHHHHHH-HHHHh-------------------hhhHHHHHHHHHHHHHHHccchhHHHHHHHH--HHHHcCCCccHHHHH
Confidence            1111111 11100                   1222222222222233233344555555544  357789999999999


Q ss_pred             HHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHH
Q 045073          320 GKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNF  354 (402)
Q Consensus       320 ~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (402)
                      +.+|.+++|.+.+.+.+..  +|+..|.+.++..+
T Consensus       137 ~slG~~~g~~l~g~l~~~~--g~~~~f~~~~~~~~  169 (382)
T TIGR00902       137 GSAAFIIGSALFGGLIGMF--DEQNILAILTAGLA  169 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHc--ChhHHHHHHHHHHH
Confidence            9999999999999999987  89988877665533

This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.

>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]

Probab=99.03  E-value=3.1e-08  Score=91.94  Aligned_cols=259  Identities=12%  Similarity=0.086  Sum_probs=152.7

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      ..+.+|++|....++|....++.......+..++|.+++.+.                       ...|.-.+|.+..+.
T Consensus       131 s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~-----------------------~~~~~a~~f~ia~~~  187 (463)
T KOG2816|consen  131 SVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLV-----------------------KFLGIALVFLIAAAS  187 (463)
T ss_pred             hhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHH-----------------------HhcCchHHHHHHHHH
Confidence            456789999999999999999999999999999999999887                       335566777776666


Q ss_pred             HHH-HHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073           83 AAL-TYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST  161 (402)
Q Consensus        83 ~~~-~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (402)
                      .++ ....++++||+-.     ++++++  +...+.....         ..........+...+.   +..+..+.+.+.
T Consensus       188 ~~~~~~y~~~~l~Esl~-----~~~~~~--~~~~~~~~~~---------~~~~~~~~~~~~~~~~---~~~r~~l~l~l~  248 (463)
T KOG2816|consen  188 GILSLLYMLLFLPESLQ-----EKERSD--ATLRELTPGS---------LDSSHVADAFQSLTKV---GPDRLLLLLLLV  248 (463)
T ss_pred             HHHHHHHHhhccccccC-----cccccc--ccccccCCCc---------ccchhhhhhhhhhccc---CCCccchHHHHH
Confidence            665 4455677999832     111111  0000000000         0000000111111111   111122332322


Q ss_pred             HHHHHHHHHHHHh-hhhhhh-hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhH-HHhhhccchhHHHHHHHH
Q 045073          162 WFLLDIAFYTINL-AQKDIY-PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFT-VFLIDRIGRFIIQLGGFL  238 (402)
Q Consensus       162 ~~~~~~~~~~~~~-~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-g~l~dr~grr~~~~~~~~  238 (402)
                      .+.......+... ..+.+. ..+|++..+.+.            ......+...++.++. +.+...+|-|+....|+.
T Consensus       249 ~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~------------~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~  316 (463)
T KOG2816|consen  249 AFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSD------------LLSLVSILGIISQLLLLPLLSSILGEKRLISLGLL  316 (463)
T ss_pred             HHHHHHHHhcCceeEEEEEEeeecCcCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHH
Confidence            2222211111111 223333 247888887554            3333444444444444 478888999988888888


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHH
Q 045073          239 LMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAA  318 (402)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~  318 (402)
                      ...+.....++..                     .. +.+...... ........+...+..+-...++.+|++.++...
T Consensus       317 ~~~~~~~~~af~~---------------------~~-w~~~~~~v~-~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~  373 (463)
T KOG2816|consen  317 SEFLQLLLFAFAT---------------------ET-WMMFAAGVV-VALAGIVFPAIRAFASILVSPEEQGKVFGIISG  373 (463)
T ss_pred             HHHHHHHHHHHhc---------------------cc-hhhhHHHHH-HHhhcchhHHHHhHHHhhcccccccchhhHHHH
Confidence            7777777777642                     11 222222222 222344556677778888899999999999999


Q ss_pred             HHHHhHHHHhHhHHhhhhcc
Q 045073          319 AGKAGAIVGAFGVQYYTQKG  338 (402)
Q Consensus       319 ~~~~g~~i~~~~~~~~~~~~  338 (402)
                      +..+.+.++|.+.+.+...+
T Consensus       374 i~~l~~~~~~~~~~~i~~~t  393 (463)
T KOG2816|consen  374 IEGLSGVVSPALYGNIFALT  393 (463)
T ss_pred             HHHHhhhhhHHHHHHHHHHH
Confidence            99999999998888775443

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=98.99  E-value=9e-09  Score=97.54  Aligned_cols=140  Identities=14%  Similarity=0.053  Sum_probs=102.0

Q ss_pred             HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073          205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT  284 (402)
Q Consensus       205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (402)
                      ......+-.++.++++|.++||+.||++++.+-++.++..+++.+.....                 ....+.++++.+.
T Consensus        50 v~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~-----------------~~~~~~Ll~~~fl  112 (524)
T PF05977_consen   50 VQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFG-----------------LLSPWLLLILTFL  112 (524)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhC-----------------cCCHHHHHHHHHH
Confidence            55555666667778899999999999999999887776665555443211                 1222334444444


Q ss_pred             HHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073          285 LFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV  363 (402)
Q Consensus       285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~  363 (402)
                      .+.+.....|...+++.|+.|++....+.++.....++..++||.+.|.+....  |...+|.+-++..++........
T Consensus       113 ~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~--G~~~~f~inalsfl~~i~~l~~~  189 (524)
T PF05977_consen  113 LGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFF--GAAAAFLINALSFLISILALLRW  189 (524)
T ss_pred             HHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHc
Confidence            444444556778889999999999999999999999999999999999988876  77778887777666655444433

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]

Probab=98.94  E-value=4.7e-09  Score=93.75  Aligned_cols=154  Identities=18%  Similarity=0.130  Sum_probs=106.6

Q ss_pred             hHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHH
Q 045073          202 SKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILY  281 (402)
Q Consensus       202 ~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (402)
                      .........++.++|.++.|++.||+|||+++...++++.++.++.+....... .              ......+..+
T Consensus        86 ~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~-~--------------~~~m~~L~~~  150 (538)
T KOG0252|consen   86 LALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTS-P--------------LGVMMTLCFF  150 (538)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCC-C--------------cchhhHHHHH
Confidence            334777888999999999999999999999999998888888875554322111 0              2344556666


Q ss_pred             HHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhh----hccCC---------cchhhHHH
Q 045073          282 GLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYT----QKGDK---------QIKQSIIT  348 (402)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~----~~~~~---------~~~~~~~~  348 (402)
                      ..+.+.+..+-.|...+.++|..-.+.||+-.+.....+..|...|..+.-.+.    ...+.         -||..+.+
T Consensus       151 R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~gl  230 (538)
T KOG0252|consen  151 RFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGL  230 (538)
T ss_pred             HHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHH
Confidence            667777777888999999999999999998887776666655554443322221    11110         35666666


Q ss_pred             HHHHHHHHhhheeeeeccCCcc
Q 045073          349 LAVVNFLGFLCSFMVPETNGLS  370 (402)
Q Consensus       349 ~~~~~~i~~i~~~~~~et~~~~  370 (402)
                      .++..++.+..-+.+|||++..
T Consensus       231 g~vpa~~~ly~Rl~M~Et~~Y~  252 (538)
T KOG0252|consen  231 GAVPALLVLYFRLKMPETARYT  252 (538)
T ss_pred             HHHHHHHHHHhhhcCCcchhHH
Confidence            6666666666666679987654

>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]

Probab=98.93  E-value=1.5e-08  Score=97.02  Aligned_cols=142  Identities=18%  Similarity=0.165  Sum_probs=108.1

Q ss_pred             HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073          205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT  284 (402)
Q Consensus       205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (402)
                      +.....++..+|.++.|+++|++|||+.++.+.+...++.++.+..                      ..+..+.+..++
T Consensus        94 ~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a----------------------~~~~~l~~GR~l  151 (513)
T KOG0254|consen   94 LTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALA----------------------PSWYQLIVGRIL  151 (513)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh----------------------hhHHHHHHHHHH
Confidence            7778889999999999999999999999999999999988888874                      233444444444


Q ss_pred             HHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeee
Q 045073          285 LFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVP  364 (402)
Q Consensus       285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~  364 (402)
                      .+.+..+...+...+.+|+.|++.||...++.+....+|..++ ++.+...+....+|+..+.+..+.+++..+..+++|
T Consensus       152 ~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~p  230 (513)
T KOG0254|consen  152 TGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLP  230 (513)
T ss_pred             hccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCC
Confidence            4444444445677889999999999999999999888777777 444444432101688888888888887777766678


Q ss_pred             ccCCc
Q 045073          365 ETNGL  369 (402)
Q Consensus       365 et~~~  369 (402)
                      |+.+.
T Consensus       231 esp~~  235 (513)
T KOG0254|consen  231 ESPRW  235 (513)
T ss_pred             CChHH
Confidence            87543

>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins

Probab=98.93  E-value=4.3e-08  Score=83.01  Aligned_cols=168  Identities=17%  Similarity=0.159  Sum_probs=108.8

Q ss_pred             HHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHH
Q 045073          164 LLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSIC  243 (402)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~  243 (402)
                      ......|.+..|.|.+-+.+|++.++...            +.....++..+| ++.|.+.|++|.+.++.++.....++
T Consensus        13 ~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~------------l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~G   79 (250)
T PF06813_consen   13 LCSGTTYTFSAYSPQLKSRLGYSQSQLNT------------LSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVG   79 (250)
T ss_pred             HhcCcccchhhhhHHHHHHhCCCHHHHHH------------HHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHH
Confidence            34457788899999999999999887554            555666666654 68899999999999999999888888


Q ss_pred             HHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHh
Q 045073          244 MAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAG  323 (402)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g  323 (402)
                      ...+.........               ....+.+.++....+.+.............+.|| +.||++.|+.-.+..++
T Consensus        80 Y~~~~l~~~~~i~---------------~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLS  143 (250)
T PF06813_consen   80 YGLLWLAVSGRIP---------------SLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLS  143 (250)
T ss_pred             HHHHHHHHhCccC---------------ccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhH
Confidence            8777665432211               1233344444333332222222333344557888 57999999999999998


Q ss_pred             HHHHhHhHHhhhhccCCcchhhHHHHH-HHHHHHhhheeee
Q 045073          324 AIVGAFGVQYYTQKGDKQIKQSIITLA-VVNFLGFLCSFMV  363 (402)
Q Consensus       324 ~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~i~~~~~  363 (402)
                      +.+-..+...+.+.   +....+.+.+ ...+++++..+++
T Consensus       144 aai~t~i~~~~f~~---~~~~fll~la~~~~~v~l~~~~~v  181 (250)
T PF06813_consen  144 AAIFTQIYSAFFGD---DPSSFLLFLAVLPAVVCLVAMFFV  181 (250)
T ss_pred             HHHHHHHHHHHcCC---ChHHHHHHHHHHHHHHHHHHhhhe
Confidence            88777666655553   2222233333 3344455555555

>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]

Probab=98.87  E-value=2.1e-08  Score=91.06  Aligned_cols=178  Identities=13%  Similarity=0.029  Sum_probs=125.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhhh-hcC----cchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhc-
Q 045073          153 LHLLGTTSTWFLLDIAFYTINLAQKDIYP-ATG----IVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDR-  226 (402)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr-  226 (402)
                      +.++.++..-+.--+.+|++...+..|+. +.+    ++.+++..            ....+....-...+++||++|| 
T Consensus        21 r~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~------------l~~~y~slVY~t~i~GG~laDr~   88 (498)
T COG3104          21 RGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATG------------LFSAYGSLVYLTPIIGGWLADRV   88 (498)
T ss_pred             chHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHH------------HHHHHHHHHHHHHHHHHHHHHHh
Confidence            46677777777777888888877766663 344    77665432            2333333333455689999999 


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccccccccccc
Q 045073          227 IGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPA  306 (402)
Q Consensus       227 ~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~  306 (402)
                      +|+|+.+..+.+++.++.++++....                   .....+.+.+.+.. .+....=+....++.|.+|+
T Consensus        89 LG~~~tI~lGail~~iGh~~L~~~~~-------------------~~~~gl~i~L~~I~-iG~Gl~K~NiS~llg~ly~~  148 (498)
T COG3104          89 LGTRRTIVLGAILMAIGHLVLAISSV-------------------SGPGGLYIGLALII-VGTGLFKPNISSLLGELYPK  148 (498)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhcccc-------------------ccccHHHHHHHHHH-hccccccccHHHHHHHhcCC
Confidence            59999999999999999888877420                   11112222222222 22334445677788999975


Q ss_pred             c--hhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeee
Q 045073          307 R--LRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVP  364 (402)
Q Consensus       307 ~--~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~  364 (402)
                      +  .|..+.++..+..++|++++|.+.+++.+..  +|+..|.+.++-..++++..++.+
T Consensus       149 ~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~--g~~~gF~~aavGm~~gl~~f~~~~  206 (498)
T COG3104         149 DDPRRDGGFTLFYMGINIGSLIAPIITGLLAINY--GWHVGFGLAAVGMIIGLVIFLLGR  206 (498)
T ss_pred             CCcccCCCccEEEEEeehHHHHHHHHHHHHHHhh--CHHHHHHHHHHHHHHHHHHHHHcc
Confidence            3  3778888888899999999999999999988  899999999998888888776654

>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]

Probab=98.84  E-value=2.1e-08  Score=94.65  Aligned_cols=168  Identities=11%  Similarity=0.066  Sum_probs=118.0

Q ss_pred             HHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHH
Q 045073          160 STWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL  239 (402)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~  239 (402)
                      +.........+....+.+.+.++++.+..+.++            +..+.........++.+.+.||+|.|.+.+.|.++
T Consensus        53 l~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~------------i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v  120 (509)
T KOG2504|consen   53 LVNLSTDGLINSFGLLFEELMDYFGSSSSQIAW------------IGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLV  120 (509)
T ss_pred             HHHHhhhcchheehhhHHHHHHHhCCCccHHHH------------HHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHH
Confidence            333333334444445667777788877775444            55555555666677899999999999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH
Q 045073          240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA  319 (402)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~  319 (402)
                      ..+++++..+.                     .+.+.+++.+.+..+.+..........++. .+..+.|+.+.|+....
T Consensus       121 ~~~g~~lssF~---------------------~~i~~l~lt~gvi~G~G~~~~~~paiviv~-~YF~kkR~lA~Gia~~G  178 (509)
T KOG2504|consen  121 AALGLLLSSFA---------------------TSLWQLYLTFGVIGGLGLGLIYLPAVVILG-TYFEKKRALATGIAVSG  178 (509)
T ss_pred             HHHHHHHHHHH---------------------hhHHHHHHHHHHHhhccchhhhcchhhhhh-hHhHHHHHHHHhhhhcc
Confidence            99998887775                     334445555555444332222222333344 45568899999999999


Q ss_pred             HHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073          320 GKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV  363 (402)
Q Consensus       320 ~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~  363 (402)
                      ..+|.++-|.+...+.+..  ||+..+++++.+.+-..+....+
T Consensus       179 sG~G~~~~~~l~~~l~~~~--G~r~~~l~~~~~~l~~~~~~~~~  220 (509)
T KOG2504|consen  179 TGVGTVVFPPLLKYLLSKY--GWRGALLIFGGISLNVLVAGALL  220 (509)
T ss_pred             CCcceeeHHHHHHHHHHHh--CcHHHHHHHHHHHHHHHHHHHHc
Confidence            9999998888888888888  99999999988887666665554

>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]

Probab=98.84  E-value=1.5e-07  Score=83.29  Aligned_cols=177  Identities=14%  Similarity=0.032  Sum_probs=122.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHH
Q 045073          154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQ  233 (402)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~  233 (402)
                      .+..+...++...+.........|.+.+.+..+..+++.            .......+..++++..+++.+|+|+|+-+
T Consensus        14 ~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~l------------iqfaff~gYf~~~lpa~~~~kk~gyk~gi   81 (422)
T COG0738          14 AFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASL------------IQFAFFGGYFIMSLPAGLLIKKLGYKAGI   81 (422)
T ss_pred             HHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHH------------HHHHHHHHHHHHhccHHHHHHHhhhHHHH
Confidence            345555555555666666677788888888888887665            77777888888888999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhh
Q 045073          234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCH  313 (402)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~  313 (402)
                      +.++.++++++.++.-...                   ...+.+.+......+.+..........+++.+.|++..+.-+
T Consensus        82 ~lgL~l~avg~~lF~pAa~-------------------~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rl  142 (422)
T COG0738          82 VLGLLLYAVGAALFWPAAS-------------------SKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRL  142 (422)
T ss_pred             HHHHHHHHHHHHHHhhhhh-------------------hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHH
Confidence            9999999998877643211                   122222222222222222223345666788888888888889


Q ss_pred             hHHHHHHHHhHHHHhHhHHhhhhcc-----C------------CcchhhHHHHHHHHHHHhhhee
Q 045073          314 GISAAAGKAGAIVGAFGVQYYTQKG-----D------------KQIKQSIITLAVVNFLGFLCSF  361 (402)
Q Consensus       314 ~~~~~~~~~g~~i~~~~~~~~~~~~-----~------------~~~~~~~~~~~~~~~i~~i~~~  361 (402)
                      .+.+.++.+|++++|.+.+.+....     +            ..++.++...+...++..+...
T Consensus       143 nl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~  207 (422)
T COG0738         143 NLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLIL  207 (422)
T ss_pred             HHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence            9999999999999999888877620     0            0456677777766665555444

>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family

Probab=98.84  E-value=7.6e-08  Score=89.12  Aligned_cols=181  Identities=15%  Similarity=0.091  Sum_probs=112.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhH-HHhhhccchhHHH
Q 045073          155 LLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFT-VFLIDRIGRFIIQ  233 (402)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-g~l~dr~grr~~~  233 (402)
                      +..+...++.+...+.....+.|.++++.|.+..+.+..        +  ......+..++..++. ++..||+|||+..
T Consensus         3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~--------~--~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~   72 (390)
T TIGR02718         3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFL--------P--LVGLPWVVKFLWAPLVDNWWSWRLGRRRSW   72 (390)
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHH--------H--HHHHHHHHHHHHHHHHhccccccCCcchhH
Confidence            455666777788888888889999999999998876540        0  1234455666666666 5578999998886


Q ss_pred             HHHHHHH-HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhh
Q 045073          234 LGGFLLM-SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTC  312 (402)
Q Consensus       234 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~  312 (402)
                      +....+. +.+...+....   ...              ....+.... .....+......+..-.+..|..+.+.++..
T Consensus        73 i~~~~~~~~~~~~~~~~~~---~~~--------------~~~~~~~~~-~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~  134 (390)
T TIGR02718        73 VLPMQCLVSACLASLALVG---PDV--------------AGAGWAVGL-LACASLASATQDIATDGMAAEHFNGRTLAKG  134 (390)
T ss_pred             HHHHHHHHHHHHHHHHcCC---cch--------------hhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCCHhhhhHH
Confidence            5554222 21222222110   000              111122222 2222222223333444556777777777877


Q ss_pred             hhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeec
Q 045073          313 HGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPE  365 (402)
Q Consensus       313 ~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~e  365 (402)
                      .+.......+|..+++...+.+.+..  +|+.+|++.+++.++..+..++++|
T Consensus       135 ~~~~~~g~~lG~~~g~~~~~~l~~~~--gw~~~f~~~a~l~~~~~~~~~~~~~  185 (390)
T TIGR02718       135 NAVQIAGVMIGFFGGGAGTLVLFGKF--GQRPAFLLVACVPLASLVCVLWLKD  185 (390)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            77777777888888888888888877  8999999999888776666555533

RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.

>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter

Probab=98.83  E-value=8.3e-08  Score=90.29  Aligned_cols=170  Identities=18%  Similarity=0.135  Sum_probs=102.1

Q ss_pred             HHHHHhhhhhhh-hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhc----cchhH-HHHHHHHHHHH
Q 045073          169 FYTINLAQKDIY-PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDR----IGRFI-IQLGGFLLMSI  242 (402)
Q Consensus       169 ~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr----~grr~-~~~~~~~~~~~  242 (402)
                      ......|++.++ +.+|.++...+.            ......+...+..++.|+++||    +|||+ .++.+....++
T Consensus        15 ~~~~~~~l~~~~~~~~g~s~~~~g~------------i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i   82 (437)
T TIGR00792        15 FAIVSTYLLFFYTDVLGLSAAFVGT------------LFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSI   82 (437)
T ss_pred             HHHHHHHHHHHHHHccCCCHHHHHH------------HHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHH
Confidence            334444455555 458998887665            7778888889999999999998    57644 56666666665


Q ss_pred             HHHHHHHHhhcccCCCCCCCCCCCccccCCc-hHHHHHHHHHHHHHHhhCCcccccccccccc-ccchhhhhhhHHHHHH
Q 045073          243 CMAILGARYDSLRGKKCDPKKDPLHEYCDGN-HAWFMILYGLTLFFANFGPNSTTFIVPAELF-PARLRSTCHGISAAAG  320 (402)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~  320 (402)
                      +.+++......  ..              .. .........+...+.. .......++..|+. +++.|++..++.+...
T Consensus        83 ~~~~~~~~~~~--~~--------------~~~~~~~~~~~~~~~~~~~-~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~  145 (437)
T TIGR00792        83 VLVLLFTTPDF--SA--------------TGKLVYAYITYILLGLFYS-FVNIPYWSLVPAITLDPRERESLSTFRRFGA  145 (437)
T ss_pred             HHHHHHhCCCC--Cc--------------chHHHHHHHHHHHHHHHHH-hhcccHhhCcccccCCHHHHHHHHHHHHHHH
Confidence            55544432110  00              11 1122222222222211 22223456667876 5688999999988888


Q ss_pred             HHhHHHHhHhHHhhhhccC-----CcchhhHHHHHHHHHHHhhhee-eeeccC
Q 045073          321 KAGAIVGAFGVQYYTQKGD-----KQIKQSIITLAVVNFLGFLCSF-MVPETN  367 (402)
Q Consensus       321 ~~g~~i~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~i~~~-~~~et~  367 (402)
                      .+|..+++.+.+.+....+     .+|+..+.+.+++.++..++.+ ..||++
T Consensus       146 ~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~  198 (437)
T TIGR00792       146 TLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERY  198 (437)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecC
Confidence            8888777666555443211     1788888888877776665544 447654

GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.

>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=98.83  E-value=1.9e-07  Score=87.43  Aligned_cols=142  Identities=15%  Similarity=0.037  Sum_probs=102.2

Q ss_pred             HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073          205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT  284 (402)
Q Consensus       205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (402)
                      ...+..++.+++.+.++.+.||++-.+.+....++.++..++....                      .+....++..++
T Consensus        86 ~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~----------------------~s~~~~ialr~l  143 (495)
T KOG2533|consen   86 LDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAV----------------------HSFPGLIALRFL  143 (495)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHH----------------------hhhHHHHHHHHH
Confidence            6667778888888899999999995555554433333322222221                      122445555556


Q ss_pred             HHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhcc----CCcchhhHHHHHHHHHHHhhhe
Q 045073          285 LFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKG----DKQIKQSIITLAVVNFLGFLCS  360 (402)
Q Consensus       285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~i~~  360 (402)
                      .+.+..+.+|....+++..|.++.|++.+|+.++...+|+++|+++...+....    ..+|++.|++-+++.++..++.
T Consensus       144 lGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~  223 (495)
T KOG2533|consen  144 LGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVV  223 (495)
T ss_pred             HHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheE
Confidence            666677778888899999999999999999999999999999998877753311    1199999999999988877666


Q ss_pred             e-eeeccCC
Q 045073          361 F-MVPETNG  368 (402)
Q Consensus       361 ~-~~~et~~  368 (402)
                      + ++|+...
T Consensus       224 f~~lp~~P~  232 (495)
T KOG2533|consen  224 FFFLPDNPS  232 (495)
T ss_pred             EEEecCChh
Confidence            6 4576543

>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]

Probab=98.74  E-value=2.3e-07  Score=80.87  Aligned_cols=178  Identities=15%  Similarity=0.055  Sum_probs=116.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHH
Q 045073          153 LHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFII  232 (402)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~  232 (402)
                      .......+.+..-.+-........|..-...|.+..+..+            +......+..+++...|.+.|++|||+.
T Consensus        78 yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~l------------lt~~v~~gmllga~~w~l~~d~~grr~~  145 (528)
T KOG0253|consen   78 YLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPL------------LTLSVFLGMLVGAMVWGLSADTIGRRKG  145 (528)
T ss_pred             hHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhH------------HHHHHHhhhhhhhhhhheehhhhhcchh
Confidence            3444444444444433333444445444445544444333            6667778889999999999999999998


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhh
Q 045073          233 QLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTC  312 (402)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~  312 (402)
                      +...+...++...+-..                      ......++.+-...+++..+ .|...++-.|..|...|...
T Consensus       146 f~~T~l~t~v~~~is~~----------------------spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~  202 (528)
T KOG0253|consen  146 FNLTFLVTGVFGVISGA----------------------SPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLL  202 (528)
T ss_pred             hhhhHHHHHHHHHhhcC----------------------CCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcc
Confidence            88776665554443332                      22223333333333333333 67777777999999999988


Q ss_pred             hhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeeccCC
Q 045073          313 HGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETNG  368 (402)
Q Consensus       313 ~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~~  368 (402)
                      +-+. ....+|.++...+.-......  ||++.+....+...+.+.+.+++||..+
T Consensus       203 ~V~~-~~waig~v~ea~law~vm~~~--gwr~~l~~~~~pl~~~a~f~~w~~ESpR  255 (528)
T KOG0253|consen  203 TVMS-FFWAIGQVFEALLAWGVMSNF--GWRYLLFTSSTPLMFAARFLVWVYESPR  255 (528)
T ss_pred             hhHH-HHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHhHHHHHHHHHhhcccCcc
Confidence            6666 777788888887777777777  8998888888777777777778888754

>PRK09669 putative symporter YagG; Provisional

Probab=98.69  E-value=4.1e-07  Score=85.72  Aligned_cols=175  Identities=17%  Similarity=0.175  Sum_probs=100.9

Q ss_pred             HHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhc----cchh-HHHHHHH
Q 045073          164 LLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDR----IGRF-IIQLGGF  237 (402)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr----~grr-~~~~~~~  237 (402)
                      ..+........|++.++. .+|++....+.            +..+..+...+..++.|+++||    +||| +.++.+.
T Consensus        20 ~~~~~~~~~~~~l~~~~t~~~gls~~~~g~------------i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~   87 (444)
T PRK09669         20 ACNLVWQTVMLFLAYFYTDVFGLSAAIMGT------------MFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFA   87 (444)
T ss_pred             hhhHHHHHHHHHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHH
Confidence            333344444555665554 48999887665            7777788888888999999999    6764 5555565


Q ss_pred             HHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccccccccc-ccchhhhhhhHH
Q 045073          238 LLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELF-PARLRSTCHGIS  316 (402)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~  316 (402)
                      ...+++.+++..... ....              ...++..+.+.+...+.. .......++.+|+. +++.|+...+..
T Consensus        88 ~~~~i~~~l~f~~p~-~~~~--------------~~~~~~~~~~~l~~~~~t-~~~ip~~al~~~~t~~~~eR~~l~~~r  151 (444)
T PRK09669         88 IPFGVVCLLTFYTPD-FGAT--------------GKIIYACVTYILLSLVYT-AINVPYCAMPGAITNDPRERHSLQSWR  151 (444)
T ss_pred             HHHHHHHHHHHhCCC-CCcc--------------hHHHHHHHHHHHHHHHHH-hhcchHHHhHHHhcCCHHHHHHHHHHH
Confidence            555555443322110 0000              112222322323322222 22223456778877 557799888888


Q ss_pred             HHHHHHhHHHHhHhHHhhhhccC-----CcchhhHHHHHHHHHHHhhheee-eecc
Q 045073          317 AAAGKAGAIVGAFGVQYYTQKGD-----KQIKQSIITLAVVNFLGFLCSFM-VPET  366 (402)
Q Consensus       317 ~~~~~~g~~i~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~i~~~~-~~et  366 (402)
                      .....+|+.+++.+...+....+     .+|...+.+.+++.++..+..++ .+|.
T Consensus       152 ~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~  207 (444)
T PRK09669        152 FALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKER  207 (444)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEe
Confidence            88888888887765544433221     15566666666666655544443 3554

>TIGR00788 fbt folate/biopterin transporter

Probab=98.60  E-value=8.2e-07  Score=83.95  Aligned_cols=177  Identities=13%  Similarity=-0.019  Sum_probs=102.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhh-hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccc----
Q 045073          154 HLLGTTSTWFLLDIAFYTINLAQKDIY-PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIG----  228 (402)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g----  228 (402)
                      ........++.+... +......+.++ +++|.+..+.+.            ......+...+ ..+.|.++||++    
T Consensus        27 ~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~------------~~sl~~lpw~~-K~l~g~l~D~~~i~G~   92 (468)
T TIGR00788        27 VLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQR------------LVGLSSLGWAL-KPFAGVMSDTFPLFGY   92 (468)
T ss_pred             HHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHH------------HHHHHHHHHHH-HHHHHHHHHhcCCCCc
Confidence            344555566777766 44444455555 468999887543            33333333333 335999999997    


Q ss_pred             -hhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccc
Q 045073          229 -RFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPAR  307 (402)
Q Consensus       229 -rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~  307 (402)
                       ||+.++++.++.+ +....... .    .              .+......+......++........-++..|..+ +
T Consensus        93 rRr~~l~~~~~l~~-~~~~~~l~-~----~--------------~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~  151 (468)
T TIGR00788        93 TKRWYLVLSGLLGS-AILYGLLP-G----K--------------VSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-E  151 (468)
T ss_pred             cchHHHHHHHHHHH-HHHHHhcc-c----c--------------cchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-c
Confidence             6776666654442 11111111 0    0              1111222212222222233333456677788888 5


Q ss_pred             hhhhhhh---HHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeeccC
Q 045073          308 LRSTCHG---ISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETN  367 (402)
Q Consensus       308 ~r~~~~~---~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~  367 (402)
                      .++...+   .......+|..+++.+.+.+.+..  +|+..|++.+++.++..+..++++|.+
T Consensus       152 ~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~--~~~~~f~~~a~l~ll~~~~~~~~~E~~  212 (468)
T TIGR00788       152 SPSAGPSLVSWMWGASATGGLISSLLGGPLLDKT--LTRILFLITAALLLLQLFVSNLSKERR  212 (468)
T ss_pred             CCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhc--CcchHHHHHHHHHHHHHHHHHhccccc
Confidence            5544333   333334579999999999998877  899999988888877755555667764

The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.

>TIGR00889 2A0110 nucleoside transporter

Probab=98.59  E-value=1.2e-06  Score=81.70  Aligned_cols=63  Identities=3%  Similarity=-0.085  Sum_probs=46.0

Q ss_pred             hhhhhhh-hhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccch-hHHHHHHHHHHHHHHHHHH
Q 045073          174 LAQKDIY-PATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGR-FIIQLGGFLLMSICMAILG  248 (402)
Q Consensus       174 ~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~gr-r~~~~~~~~~~~~~~~~~~  248 (402)
                      .+++.++ ++.|++..+.+.            ......++.+++.++.|+++||+|| |+++.++.++..+...+..
T Consensus        23 ~~l~~~l~~~~g~s~~~iGl------------~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~   87 (418)
T TIGR00889        23 VTLGSYMSKTLHFSGAEIGW------------VYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAA   87 (418)
T ss_pred             HHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence            3444444 558999887776            7888889999999999999999965 7677766665555444433

This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.

>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]

Probab=98.58  E-value=6.2e-07  Score=82.51  Aligned_cols=188  Identities=11%  Similarity=0.019  Sum_probs=115.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh--cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccc
Q 045073          151 HGLHLLGTTSTWFLLDIAFYTINLAQKDIYPA--TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIG  228 (402)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g  228 (402)
                      +||.++...+..+...+.+.....-.-.|.++  .+-+.+..|.            ......++..+++++.|+...|.+
T Consensus        32 ~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~------------viaa~slg~~i~~liF~~Ws~k~~   99 (488)
T KOG2325|consen   32 NWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGL------------VIAASSLGHAIFSLIFGIWSNKTG   99 (488)
T ss_pred             chHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhH------------HHHHHHHHHHhcchhhcccccccC
Confidence            34455555555555544433332222334444  3333333333            666688999999999999999988


Q ss_pred             h-hHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccc
Q 045073          229 R-FIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPAR  307 (402)
Q Consensus       229 r-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~  307 (402)
                      . |+.++.+.+++.++.++........                 ++ ..++++.+-...+.+.+..+..-.|+++..-.+
T Consensus       100 ~~k~Pli~s~ii~~~g~llY~~l~~~~-----------------~~-~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~  161 (488)
T KOG2325|consen  100 SVKKPLIVSFLIAIIGNLLYLALAYVP-----------------NG-VKYLMLVARILTGVGVGNFAVLRAYIADASTVE  161 (488)
T ss_pred             CcccCHHHHHHHHHHHHHHHHHHHhcc-----------------cc-hHHHHHHHHHHcCcCcccHHHHHHHHHhccCcc
Confidence            5 6666778888888887774433211                 21 233333333333334556667888899988888


Q ss_pred             hhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCC-----------cchhhHHHHHHHHHHHhhheee-eeccCC
Q 045073          308 LRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDK-----------QIKQSIITLAVVNFLGFLCSFM-VPETNG  368 (402)
Q Consensus       308 ~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~i~~i~~~~-~~et~~  368 (402)
                      .|.++.+......-+|.++||.+...+.....+           .+..+-++.+++.++.+++.++ ++|...
T Consensus       162 dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~  234 (488)
T KOG2325|consen  162 DRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR  234 (488)
T ss_pred             chHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence            889888888877778888888654443322111           3446777888888887776664 466443

>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins

Probab=98.55  E-value=4.8e-07  Score=84.42  Aligned_cols=151  Identities=12%  Similarity=0.040  Sum_probs=83.5

Q ss_pred             HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073          205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT  284 (402)
Q Consensus       205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (402)
                      ...+..++.++|..+......+..-|+++..+.++.++..+.-......+... .        |+  .+.+..+.--.+.
T Consensus       260 ~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~-~--------Gi--~d~~f~lgd~~l~  328 (433)
T PF03092_consen  260 LSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLD-L--------GI--PDQWFALGDTILE  328 (433)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeee-e--------Cc--CCeEEEEEhHHHH
Confidence            44666677777777776666666667776665544333322211111100000 0        00  0111111111112


Q ss_pred             HHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCC------cchhhHHHHHHHHHHHhh
Q 045073          285 LFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDK------QIKQSIITLAVVNFLGFL  358 (402)
Q Consensus       285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~------~~~~~~~~~~~~~~i~~i  358 (402)
                      .........| ...+++|+.|+..-|+.+++...+.++|..++..+...+.+..+.      +.....++..++.++...
T Consensus       329 ~~~~~i~~mP-~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~  407 (433)
T PF03092_consen  329 EVIGMIAFMP-SLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLP  407 (433)
T ss_pred             HHHHHHHHHH-HHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHH
Confidence            2222233333 334679999999999999999999999999998887777665431      334455555566666666


Q ss_pred             heeeeeccC
Q 045073          359 CSFMVPETN  367 (402)
Q Consensus       359 ~~~~~~et~  367 (402)
                      +..++|+.+
T Consensus       408 ll~lLp~~~  416 (433)
T PF03092_consen  408 LLFLLPPQK  416 (433)
T ss_pred             HHHHcCCCc
Confidence            666666543

Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).

>PRK10429 melibiose:sodium symporter; Provisional

Probab=98.54  E-value=1.8e-06  Score=81.96  Aligned_cols=178  Identities=15%  Similarity=0.041  Sum_probs=99.2

Q ss_pred             HHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhh----ccch-hHHH
Q 045073          160 STWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLID----RIGR-FIIQ  233 (402)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~d----r~gr-r~~~  233 (402)
                      +..+..++.......|++.|+.+ .|+++...+.            +..+.-+...+..++.|+++|    |+|| |+.+
T Consensus        13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~------------i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~i   80 (473)
T PRK10429         13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGT------------LFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWI   80 (473)
T ss_pred             cchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHhhchheeehhcCCCCCCCcchhH
Confidence            33344445555566667777765 6998876555            667777888888889999999    5688 5556


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCc-hHHHHHHHHHHHHHHhhCCcccccccccccc-ccchhhh
Q 045073          234 LGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGN-HAWFMILYGLTLFFANFGPNSTTFIVPAELF-PARLRST  311 (402)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~  311 (402)
                      +.+....++++.++....   ...             +.. .++..+.+.+...+... ......++..|+. +++.|..
T Consensus        81 l~g~i~~~i~~~llf~~p---~~~-------------~~~~~~~~~~~~~l~~~~~t~-~~ip~~al~~~lt~~~~eR~~  143 (473)
T PRK10429         81 LIGTLANSVVLFLLFSAH---LFE-------------GTAQYVFVCVTYILWGMTYTI-MDIPFWSLVPTLTLDKREREQ  143 (473)
T ss_pred             hhhhHHHHHHHHHHHcCC---CCC-------------ccHHHHHHHHHHHHHHHHHHH-HcchHHhhhHHhCCCHHHHHH
Confidence            666665555544432210   000             011 11222222222222222 2233556778887 5789999


Q ss_pred             hhhHHHHHHHHhHHHHhHhHHhhhhccCC-----cchhhHHHHHHHHHHHhhheee-eecc
Q 045073          312 CHGISAAAGKAGAIVGAFGVQYYTQKGDK-----QIKQSIITLAVVNFLGFLCSFM-VPET  366 (402)
Q Consensus       312 ~~~~~~~~~~~g~~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~i~~~~-~~et  366 (402)
                      ..+.-..+..+|+.+.+.+...+....+.     ++.....+.+++.+++.++.++ .+|.
T Consensus       144 l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~  204 (473)
T PRK10429        144 LVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEV  204 (473)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceec
Confidence            88887777777766665444333222110     3444555555555554444443 4654

>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]

Probab=98.53  E-value=3.1e-07  Score=84.43  Aligned_cols=302  Identities=15%  Similarity=0.084  Sum_probs=144.2

Q ss_pred             hhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHHH
Q 045073            6 AVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAAL   85 (402)
Q Consensus         6 ~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~~   85 (402)
                      -+|+++....++|.++++....+..+|.++||.++..+.....+     .++-.|+.     .-.-+..+-++.++..++
T Consensus       151 R~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~-----G~~i~~~~-----~~n~YTap~w~m~i~~i~  220 (488)
T KOG2325|consen  151 RAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEK-----GFMILPGL-----IFNMYTAPAWLMAILWII  220 (488)
T ss_pred             HHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCC-----ceEEcCcc-----eEEecchHHHHHHHHHHH
Confidence            46889988999999999999999999999999998877632211     11111111     111233445566666665


Q ss_pred             HH-HHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHHHHH
Q 045073           86 TY-YWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFL  164 (402)
Q Consensus        86 ~~-~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (402)
                      .+ ++.+++.|.++--..++.++++              ++..+.           +..+.+.  ..+...+.+.+..+.
T Consensus       221 ~~v~i~~~f~E~~~~~~~~~~~~~~--------------~~~~~~-----------~~~~~~~--~d~~~~~vc~~~~~~  273 (488)
T KOG2325|consen  221 YIVIILFFFKEVYRGIIDKKKRSVE--------------EEKSDI-----------EKVKKPK--LDWVAVLVCIFLRFV  273 (488)
T ss_pred             HHHHHHhheeecccCccccccccch--------------hhccch-----------hhhccCC--hhHHHHHHHHHHHHH
Confidence            43 3445578875431110000000              000000           0001111  111244455555555


Q ss_pred             HHHHHHHHHh-hhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhh-hccchhHHHHHHHHHHHH
Q 045073          165 LDIAFYTINL-AQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLI-DRIGRFIIQLGGFLLMSI  242 (402)
Q Consensus       165 ~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~-dr~grr~~~~~~~~~~~~  242 (402)
                      ....+..... ..+.....++++.+++..        ..+.......+..++-.+...+.. -++.+|..++.+.+....
T Consensus       274 ~~~~~~~iet~~~~~~m~~y~w~~~~av~--------~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~~g~l~~f~  345 (488)
T KOG2325|consen  274 VNFIATTIETLSSALTMVMYGWTGSEAVL--------YNGITLSISGILSVILLLLYIFTRLGKIDKRRIILLGFLIFFL  345 (488)
T ss_pred             HHHHHHHHHhccchHHHHHhccccchHHH--------hhhhHHHHHHHHHHHHHHHHHHHHhhhhccceeeeehHHHHHH
Confidence            5555544333 334444456776665433        222233333333333322333332 233345444444333333


Q ss_pred             HHHHHHHHhhcccCCCCCCCC-------CCCccccCCchHHHHHHHH----HHHHHHhhCCccccccccccccccchhhh
Q 045073          243 CMAILGARYDSLRGKKCDPKK-------DPLHEYCDGNHAWFMILYG----LTLFFANFGPNSTTFIVPAELFPARLRST  311 (402)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~e~~p~~~r~~  311 (402)
                      +..+...+..... .+.+.-+       ..-..||+.....-..++.    +..+...-.......+.-+|+..++.+++
T Consensus       346 ~~~i~~yp~~~~s-~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~  424 (488)
T KOG2325|consen  346 SYYIFTYPWGFYS-GPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGT  424 (488)
T ss_pred             hhheeeeeccccc-cccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCCccccc
Confidence            3222222211111 0000000       0011222222211111111    11111111112234456688999999999


Q ss_pred             hhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHH
Q 045073          312 CHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFL  355 (402)
Q Consensus       312 ~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  355 (402)
                      ..++....+..+..++|.+........  +.++.+.+.++..++
T Consensus       425 ~qg~~~~~~s~~~~~~~~~~t~~~~~~--g~~~v~~~~~~~~l~  466 (488)
T KOG2325|consen  425 MQGVFSISGSIARVVGPIFSTAIFTLS--GPRPVWIILLCLLLV  466 (488)
T ss_pred             eeEEEEeccchhhhhhHHHHhhhHHhc--CccHHHHHHHHHHHH
Confidence            999999999999999998877777666  666665555544443

>PF13347 MFS_2: MFS/sugar transport protein

Probab=98.52  E-value=7.7e-07  Score=83.45  Aligned_cols=171  Identities=18%  Similarity=0.169  Sum_probs=103.6

Q ss_pred             HHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhh----ccchhHH-HHHHHHHHH
Q 045073          168 AFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLID----RIGRFII-QLGGFLLMS  241 (402)
Q Consensus       168 ~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~d----r~grr~~-~~~~~~~~~  241 (402)
                      .......+...++. ..|+++...+.            ...+.-+...+..++.|+++|    |+|||+. ++++....+
T Consensus        16 ~~~~~~~~~~~f~~~~~gl~~~~~g~------------i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~   83 (428)
T PF13347_consen   16 IWSLLSSYLLYFYTDVLGLSPALAGL------------ILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLA   83 (428)
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHH
Confidence            33334445455554 46898876554            666667777778889999999    7887655 445666666


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCCCCccccCCch-HHHHHHHHHHHHHHhhCCccccccccccccc-cchhhhhhhHHHHH
Q 045073          242 ICMAILGARYDSLRGKKCDPKKDPLHEYCDGNH-AWFMILYGLTLFFANFGPNSTTFIVPAELFP-ARLRSTCHGISAAA  319 (402)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-~~~r~~~~~~~~~~  319 (402)
                      ++++++.....              .+...... .+..+.+.++..+ .........++..|+.+ ++.|....+....+
T Consensus        84 ~~~~llf~~~p--------------~~~~~~~~~~~~~~~~~l~~~~-~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~  148 (428)
T PF13347_consen   84 LSFFLLFSPPP--------------AGLSFTAKLVWLFVFYILFDIA-YTFVQIPYNALIPELTPDPDERTRLSSWRMIF  148 (428)
T ss_pred             HHHHHhhcccc--------------chhhhhhHHHHHHHHHHHHHHh-hhhccCchhhcCccccccHhhhhhHHHHHHHH
Confidence            65555443200              00000111 1222223323222 22233345677899987 47899999999999


Q ss_pred             HHHhHHHHhHhHHhhhhccCC-----cchhhHHHHHHHHHHHhhheee-eec
Q 045073          320 GKAGAIVGAFGVQYYTQKGDK-----QIKQSIITLAVVNFLGFLCSFM-VPE  365 (402)
Q Consensus       320 ~~~g~~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~i~~~~-~~e  365 (402)
                      ..+|..+...+.+.+.+..+.     +|.....+.+++.+++.++.++ .+|
T Consensus       149 ~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke  200 (428)
T PF13347_consen  149 SMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE  200 (428)
T ss_pred             HHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence            988887777777666654432     4667777777777766666554 377

>KOG3762 consensus Predicted transporter [General function prediction only]

Probab=98.50  E-value=4.9e-07  Score=82.70  Aligned_cols=133  Identities=12%  Similarity=0.143  Sum_probs=99.5

Q ss_pred             HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073          205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT  284 (402)
Q Consensus       205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (402)
                      .......+.++..++.+++.+|+|+-+++..++.+..+=++.++...                     +. |.++.+-++
T Consensus       411 ~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~---------------------n~-W~vLPieil  468 (618)
T KOG3762|consen  411 VSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQ---------------------NP-WMVLPIEIL  468 (618)
T ss_pred             hhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhc---------------------Cc-hheeeHHHH
Confidence            66677788888888999999999999999888777776666666542                     22 333333444


Q ss_pred             HHHHhhCCccccccccccccccchhhhhhhHHHHHHH-HhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee
Q 045073          285 LFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGK-AGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF  361 (402)
Q Consensus       285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~-~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~  361 (402)
                      .+......+....+|++...|++.|.++.++...... +|-.+|+++.|.+....  +-+..|.++++.+++.+++..
T Consensus       469 qgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f--g~~ttf~~~giAcl~~l~~~~  544 (618)
T KOG3762|consen  469 QGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERF--GARTTFRIFGIACLVTLALFI  544 (618)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheee--hhHHHHHHHHHHHHHHHHHHH
Confidence            4443344455677889999999999999999877654 67779999999998887  778888888887776665544

>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []

Probab=98.47  E-value=5.2e-07  Score=81.85  Aligned_cols=173  Identities=10%  Similarity=0.043  Sum_probs=91.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHH
Q 045073          156 LGTTSTWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQL  234 (402)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~  234 (402)
                      +......+...+.+-....+.+.++++ .|++..+.|.            +.....+..++..++.|.++||+|.|+-++
T Consensus        10 ~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~------------i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll   77 (412)
T PF01306_consen   10 WWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGI------------IFSAGSLFALLAQPVYGFISDKLGLKKHLL   77 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHH------------HHHHHHHHHHHTHHHHHHHHHHCTTCSHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHH------------HHHHHHHHHHHHHHhHHHhcchhhhhHHHH
Confidence            333333344333444455566777865 8999998776            788888889999999999999999766554


Q ss_pred             HHHHHHHHHHHHHHH-HhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccccccccccc---chhh
Q 045073          235 GGFLLMSICMAILGA-RYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPA---RLRS  310 (402)
Q Consensus       235 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~---~~r~  310 (402)
                      .......+....+.. .......               .+. ....  .+.....+....+...  +.|.+-.   +..+
T Consensus        78 ~~i~~l~~l~~pff~~v~~pll~---------------~n~-~lg~--iig~i~l~~~f~~~~~--~~Ea~~er~sr~~~  137 (412)
T PF01306_consen   78 WFIAILLLLFGPFFIYVFGPLLQ---------------SNF-WLGA--IIGGIYLGLVFNAGVP--LSEAYAERVSRRNG  137 (412)
T ss_dssp             HHHHHHHHTCHHHHHHTHHHHHH---------------TT--HHHH--HHTTTTTTTTTTTHHH--HHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH---------------HHH-HHHH--HHHHHHHHHHHcccch--HHHHHHHHHHHHhc
Confidence            433222111111111 1000000               011 1111  1111111112221111  2344332   2335


Q ss_pred             hhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073          311 TCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV  363 (402)
Q Consensus       311 ~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~  363 (402)
                      .-.|=....+.+|.++++.+.|.+.+.   +....|++..+..++..++.++.
T Consensus       138 feYG~~R~wGSig~ai~s~~~G~L~~i---~p~~~fwi~s~~~~il~lll~~~  187 (412)
T PF01306_consen  138 FEYGRARMWGSIGFAIASLLAGILFNI---NPNIIFWIASAAAIILLLLLLLL  187 (412)
T ss_dssp             S-HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             CCcchHHHHhhHHHHHHHHHhheeeee---CccHHHHHHHHHHHHHHHHHHHc
Confidence            557778889999999999999998875   55677777665555444444443

The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.

>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]

Probab=98.46  E-value=3.7e-06  Score=76.82  Aligned_cols=142  Identities=16%  Similarity=0.068  Sum_probs=85.4

Q ss_pred             HHHHHHhhhhhhhhhHHHhhhccchh-------HHHHHHHHHHHHHHHHHHHHhhcccC-CCCCCCCCCCccccCCchHH
Q 045073          205 MFLVALFATVPGYWFTVFLIDRIGRF-------IIQLGGFLLMSICMAILGARYDSLRG-KKCDPKKDPLHEYCDGNHAW  276 (402)
Q Consensus       205 ~~~~~~~~~~~g~~~~g~l~dr~grr-------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  276 (402)
                      ..+++.+.-++.+++..++..+.+++       .-+-+++.+++.+++++......... .+             ..+.+
T Consensus       329 fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~-------------~~s~~  395 (498)
T COG3104         329 FQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSG-------------LVSVW  395 (498)
T ss_pred             HHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCC-------------CcCHH
Confidence            55666666666666666776664433       22344556666666666555332222 10             23334


Q ss_pred             HHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHh------hhhccCCcchhhHHHHH
Q 045073          277 FMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQY------YTQKGDKQIKQSIITLA  350 (402)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~------~~~~~~~~~~~~~~~~~  350 (402)
                      +.+...++..++-....|+..+++..+.|+...+..++........++.++..+.+.      ..+..  .....|+..+
T Consensus       396 ~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~--~~~~~F~~~g  473 (498)
T COG3104         396 WLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAF--IEGRVFGTIG  473 (498)
T ss_pred             HHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhh--hhhhhHHHHH
Confidence            444444445555677778888999999999999998888887777777777665552      11111  3345666666


Q ss_pred             HHHHHHhhhee
Q 045073          351 VVNFLGFLCSF  361 (402)
Q Consensus       351 ~~~~i~~i~~~  361 (402)
                      ...++..+..+
T Consensus       474 ~v~i~~~~~~~  484 (498)
T COG3104         474 VVAIVIGILLL  484 (498)
T ss_pred             HHHHHHHHHHH
Confidence            66555544444

>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function

Probab=98.42  E-value=1.9e-05  Score=69.65  Aligned_cols=157  Identities=17%  Similarity=0.035  Sum_probs=91.6

Q ss_pred             hhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 045073          178 DIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGK  257 (402)
Q Consensus       178 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (402)
                      .++++.|++..+.+.            +.......+.+...+.|.++||+|||+.-+...++.+++++..-.        
T Consensus        59 ~LY~~yg~~~~qIa~------------Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~--------  118 (354)
T PF05631_consen   59 ALYESYGFSEHQIAI------------LFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHS--------  118 (354)
T ss_pred             HHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhc--------
Confidence            344678888876544            666677777777788999999999999888776666666643222        


Q ss_pred             CCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccc-ccccc----cccchhhhhhhHHHHH-HHHhHHHHhHhH
Q 045073          258 KCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFI-VPAEL----FPARLRSTCHGISAAA-GKAGAIVGAFGV  331 (402)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~----~p~~~r~~~~~~~~~~-~~~g~~i~~~~~  331 (402)
                                     +....+.+-.++.+.......+..=+ ++.|.    +|.+..+...+..... +.+..+++..+.
T Consensus       119 ---------------~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a  183 (354)
T PF05631_consen  119 ---------------SNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVA  183 (354)
T ss_pred             ---------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHH
Confidence                           11233333333333322222221111 23443    5555555555544422 334445555566


Q ss_pred             HhhhhccCCcchhhHHHHHHHHHHHhhheeee-eccCCc
Q 045073          332 QYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV-PETNGL  369 (402)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~-~et~~~  369 (402)
                      ..+.+..+.+...+|....++.+++.++.... +|..+.
T Consensus       184 ~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~  222 (354)
T PF05631_consen  184 NVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGD  222 (354)
T ss_pred             HHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCC
Confidence            66666553345688888888888777766543 666544

>PF03825 Nuc_H_symport: Nucleoside H+ symporter

Probab=98.40  E-value=9.6e-06  Score=74.74  Aligned_cols=163  Identities=15%  Similarity=0.088  Sum_probs=89.6

Q ss_pred             HHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccc-hhHHHHHHHHHHHHHHHHH
Q 045073          169 FYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIG-RFIIQLGGFLLMSICMAIL  247 (402)
Q Consensus       169 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g-rr~~~~~~~~~~~~~~~~~  247 (402)
                      +-....+.+.++++.|++..+.+.            +.....+..+++.++.|.++||.+ +|+++.+..++.++.....
T Consensus        18 ~G~~~p~~~~~L~~~G~s~~qIG~------------l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~   85 (400)
T PF03825_consen   18 YGAFLPYLPLYLESRGFSGTQIGI------------LLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL   85 (400)
T ss_pred             HHHHHHHHHHHHHhCCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH
Confidence            334445678899999999998776            778888889999999999999986 4566655555544443333


Q ss_pred             HHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHH
Q 045073          248 GARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVG  327 (402)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~  327 (402)
                      ...                     .+.+.+..+..+. ........|..-+++.+...  .++.-.|-....+.+|-+++
T Consensus        86 ~~~---------------------~~f~~~~~~~~l~-~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~  141 (400)
T PF03825_consen   86 AFS---------------------SSFWWLFVIMLLF-SFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVA  141 (400)
T ss_pred             HHh---------------------ccHHHHHHHHHHH-HHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHH
Confidence            221                     2222333322222 22223333444444444433  34455566666666666666


Q ss_pred             hHhH-HhhhhccCC-cchhhHHHHHHHHHHHhhheeeeeccC
Q 045073          328 AFGV-QYYTQKGDK-QIKQSIITLAVVNFLGFLCSFMVPETN  367 (402)
Q Consensus       328 ~~~~-~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~~~~~et~  367 (402)
                      .... ..+....+. +....+++.++..++.....+.+|+++
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l~lp~~~  183 (400)
T PF03825_consen  142 ALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFALFLPKTP  183 (400)
T ss_pred             HHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHhCCCCc
Confidence            4432 222222100 222445555555544444445567654

>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]

Probab=98.37  E-value=6.9e-06  Score=76.50  Aligned_cols=137  Identities=22%  Similarity=0.196  Sum_probs=103.2

Q ss_pred             HHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHH
Q 045073          209 ALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFA  288 (402)
Q Consensus       209 ~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (402)
                      ..+..++.+...|.++||+|||..+....+...+....+.+.                      . +++.++....+  .
T Consensus        71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~----------------------~-~~~~~~~~l~g--~  125 (463)
T KOG2816|consen   71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQ----------------------G-YWFFLLLGLSG--G  125 (463)
T ss_pred             hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHH----------------------H-HHHhhhccccc--c
Confidence            355666777789999999999999988877666655555442                      2 22222222222  2


Q ss_pred             hhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeeccC
Q 045073          289 NFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPETN  367 (402)
Q Consensus       289 ~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~  367 (402)
                      .....+..+++.++....+.|....|+.+.....+..++|.+.+......  ++..+|.+.++..+++.+... ++||+.
T Consensus       126 ~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~--~~a~~f~ia~~~~~~~~~y~~~~l~Esl  203 (463)
T KOG2816|consen  126 FSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFL--GIALVFLIAAASGILSLLYMLLFLPESL  203 (463)
T ss_pred             hhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhc--CchHHHHHHHHHHHHHHHHHhhcccccc
Confidence            23445678889999999999999999999999999999999999988887  888999999999888888776 458886


Q ss_pred             Ccccc
Q 045073          368 GLSLE  372 (402)
Q Consensus       368 ~~~~~  372 (402)
                      .++.+
T Consensus       204 ~~~~~  208 (463)
T KOG2816|consen  204 QEKER  208 (463)
T ss_pred             Ccccc
Confidence            55544

>PRK11462 putative transporter; Provisional

Probab=98.34  E-value=1.2e-05  Score=75.89  Aligned_cols=172  Identities=21%  Similarity=0.178  Sum_probs=99.8

Q ss_pred             HHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhc----cchh-HHHHHHHHH
Q 045073          166 DIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDR----IGRF-IIQLGGFLL  239 (402)
Q Consensus       166 ~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr----~grr-~~~~~~~~~  239 (402)
                      +..+.....|+..++.+ .|+++...+.            +..+.-+...+.-++.|+++||    +||| +.++++.+.
T Consensus        22 ~~~~~~~~~~l~~fyt~~~Gl~~~~~g~------------i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~   89 (460)
T PRK11462         22 HIIFDNVMLYMMFFYTDIFGIPAGFVGT------------MFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALP   89 (460)
T ss_pred             hHHHHHHHHHHHHHHHHhhCCCHHHHHH------------HHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHH
Confidence            33444445556666544 7888886554            6777777788888899999996    5765 445556566


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCc-hHHHHHHHHHHHHHHhhCCccccccccccccc-cchhhhhhhHHH
Q 045073          240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGN-HAWFMILYGLTLFFANFGPNSTTFIVPAELFP-ARLRSTCHGISA  317 (402)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-~~~r~~~~~~~~  317 (402)
                      .+++++++..... . ..              .. ..+..+.+.+...+.... .....++.+|+.+ ++.|++..++-.
T Consensus        90 ~~i~~~llf~~p~-~-s~--------------~~~~~y~~~~~~~~~~~~t~~-~ipy~al~~~lt~d~~eRt~l~s~r~  152 (460)
T PRK11462         90 FGIVCVLAYSTPD-L-SM--------------NGKMIYAAITYTLLTLLYTVV-NIPYCALGGVITNDPTQRISLQSWRF  152 (460)
T ss_pred             HHHHHHHHHhCCC-C-Cc--------------chHHHHHHHHHHHHHHHHHHH-hccHHHHHHHhcCCHHHHHHHHHHHH
Confidence            6665544332210 0 00              12 222333333332222222 2234567778876 688999999999


Q ss_pred             HHHHHhHHHHhHhHHhhhhccC-----CcchhhHHHHHHHHHHHhhheee-eecc
Q 045073          318 AAGKAGAIVGAFGVQYYTQKGD-----KQIKQSIITLAVVNFLGFLCSFM-VPET  366 (402)
Q Consensus       318 ~~~~~g~~i~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~i~~~~-~~et  366 (402)
                      ..+.+|..+++.+...+....+     .+|.....+++++.+++..+.+. .+|.
T Consensus       153 ~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~  207 (460)
T PRK11462        153 VLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKER  207 (460)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhcceec
Confidence            9999988888766554444332     13555555666655555544443 3553

>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX)

Probab=98.24  E-value=0.00012  Score=66.33  Aligned_cols=72  Identities=10%  Similarity=0.111  Sum_probs=56.1

Q ss_pred             hhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHHH
Q 045073            6 AVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAAL   85 (402)
Q Consensus         6 ~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~~   85 (402)
                      .+|+--..|+++-.++.+...++.-+|..++..+|..+..                     .+....+..+.+......+
T Consensus       115 ~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs---------------------~~~~sy~~L~~isl~~~~~  173 (412)
T PF01770_consen  115 YSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVS---------------------FGGVSYFQLNYISLASVSL  173 (412)
T ss_pred             HHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------hcCCCHHHHHHHHHHHHHH
Confidence            4566666788888899999999999999999999998873                     2456678887777666666


Q ss_pred             HHHHHhhccCCch
Q 045073           86 TYYWRMKMPETAR   98 (402)
Q Consensus        86 ~~~~~~~~pesp~   98 (402)
                      .+++.+++|..++
T Consensus       174 a~~~~~fLP~~~~  186 (412)
T PF01770_consen  174 ALLIALFLPMPKR  186 (412)
T ss_pred             HHHHHHHcCCCCc
Confidence            6777777887665

Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane

>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]

Probab=98.19  E-value=2.4e-05  Score=70.50  Aligned_cols=119  Identities=15%  Similarity=0.066  Sum_probs=78.5

Q ss_pred             HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHH-H
Q 045073          205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYG-L  283 (402)
Q Consensus       205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  283 (402)
                      .+.++.+..++..+.+.|+.||+|-|..++.+..+.+++..+-.+......++               ..+..+...+ .
T Consensus        84 lsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~---------------~f~~~l~~~Gq~  148 (480)
T KOG2563|consen   84 LSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPP---------------LFRRPLTHTGQS  148 (480)
T ss_pred             HHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccc---------------cchhhhhHHhHH
Confidence            77777888888888999999999999999999888888876655543211111               1111111111 1


Q ss_pred             HHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhcc
Q 045073          284 TLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKG  338 (402)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~  338 (402)
                      ..............-+..-.||+++|+++..+..+.+.+|.+++..+.+.+....
T Consensus       149 iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~  203 (480)
T KOG2563|consen  149 IAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS  203 (480)
T ss_pred             HHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence            1111111111122234455799999999999999999999999998888777654

>KOG3098 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.14  E-value=0.00022  Score=65.86  Aligned_cols=127  Identities=17%  Similarity=0.185  Sum_probs=70.9

Q ss_pred             HHHHHHHHhhhhhhhhhHHHhhhc---cchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHH
Q 045073          203 KAMFLVALFATVPGYWFTVFLIDR---IGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMI  279 (402)
Q Consensus       203 ~~~~~~~~~~~~~g~~~~g~l~dr---~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (402)
                      ++......++.+++....+.+.+|   +||++.+.++..+..+..++.........+  ..+.+.+..-+  ........
T Consensus       282 ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap--~~~t~~~~~~~--~~~~~~~~  357 (461)
T KOG3098|consen  282 AIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAP--LRPTDSPPLLF--TPSYYLAL  357 (461)
T ss_pred             HHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCC--CCCCccccccc--ccchhHHH
Confidence            335566677777777777777765   678888887776665555444333221111  11111111111  11222333


Q ss_pred             HHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhh
Q 045073          280 LYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYY  334 (402)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~  334 (402)
                      +.....++.-.......+.++...+ ++.|..+.++.-....++..++-+..+..
T Consensus       358 ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~~  411 (461)
T KOG3098|consen  358 IIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPYL  411 (461)
T ss_pred             HHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence            3333334434445556677778888 57788888888888777776666555443

>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]

Probab=98.12  E-value=0.00012  Score=67.64  Aligned_cols=177  Identities=19%  Similarity=0.161  Sum_probs=105.1

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhc----cchh-
Q 045073          157 GTTSTWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDR----IGRF-  230 (402)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr----~grr-  230 (402)
                      ...+.-+..+..+.....|+..++.+ .|+++..++.            +..+.=+.-.+.-++.|.++||    +||+ 
T Consensus        16 ~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~------------iflv~RiiDAi~DP~~G~i~D~t~~r~GrfR   83 (467)
T COG2211          16 GYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGT------------IFLVARIIDAITDPIMGFIVDRTRSRWGRFR   83 (467)
T ss_pred             hhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHH------------HHHHHHHHHHHhcchheeeeccccccccccc
Confidence            33444444555555666677777765 8888886555            6777777788888899999997    5554 


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccc-cchh
Q 045073          231 IIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFP-ARLR  309 (402)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-~~~r  309 (402)
                      +.++++.+..++...++..... ....              .......+.+.+...++..... ...++.+|+.+ +++|
T Consensus        84 P~lL~g~ip~~i~~~l~F~~p~-~~~~--------------~k~~ya~vtY~l~~l~YT~vni-Py~al~~~iT~d~~ER  147 (467)
T COG2211          84 PWLLWGAIPFAIVAVLLFITPD-FSMT--------------GKLIYALVTYMLLGLGYTLVNI-PYGALGPEITQDPQER  147 (467)
T ss_pred             HHHHHHhHHHHHHHHHHHcCCC-cccC--------------cchHHHHHHHHHHHHHHHheeC-chhhcchhhcCCHHHH
Confidence            5555565555554444333211 0000              2222333333333333333322 34456677764 5789


Q ss_pred             hhhhhHHHHHHHHhHHHHhHhHHhhhhccCC-----cchhhHHHHHHHHHHHhhhee
Q 045073          310 STCHGISAAAGKAGAIVGAFGVQYYTQKGDK-----QIKQSIITLAVVNFLGFLCSF  361 (402)
Q Consensus       310 ~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~i~~~  361 (402)
                      ....+.-..+..+|..+...+.+.+....+.     +++...++++++..+..++++
T Consensus       148 ~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~  204 (467)
T COG2211         148 ASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCF  204 (467)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999988888888777665543     444444455555444444444

>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]

Probab=98.12  E-value=0.00012  Score=64.42  Aligned_cols=158  Identities=16%  Similarity=0.057  Sum_probs=113.2

Q ss_pred             HHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHH
Q 045073          167 IAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAI  246 (402)
Q Consensus       167 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~  246 (402)
                      ....+....++.+-++.|.|.+.++.            +..+..++.-..+++..++.+|+|.++.+..++++.+++.++
T Consensus        26 ~~itsvgPLL~~Ir~~~gls~s~aGl------------LTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~i   93 (395)
T COG2807          26 PAITSVGPLLDEIRQDLGLSFSVAGL------------LTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILI   93 (395)
T ss_pred             hhhhhhhhhHHHHHHHhcccHHHHHH------------HHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence            44555566677888889999887766            777778888888889999999999999999888777776655


Q ss_pred             HHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHH
Q 045073          247 LGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIV  326 (402)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i  326 (402)
                      =...                      +....+....+. +.+....+......+-+.||++. +..+|++.....+++.+
T Consensus        94 R~~~----------------------~~~~L~~gt~l~-G~gIav~nVLLPslIK~~Fpk~~-~~mtglYs~sl~~~aaL  149 (395)
T COG2807          94 RSLG----------------------GLPLLFLGTLLA-GAGIAVINVLLPSLIKRDFPKRV-GLMTGLYSTSLGAGAAL  149 (395)
T ss_pred             Hhcc----------------------cHHHHHHHHHHH-HhhHHHHHHhhhHHHHhhcccch-hhHHhHHHHHHHHHHHH
Confidence            4442                      111222211111 11111122345566788888665 88999999999999999


Q ss_pred             HhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee
Q 045073          327 GAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF  361 (402)
Q Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~  361 (402)
                      ++.+...+.++.+ +|+....+.+..++++++..+
T Consensus       150 aa~lavpla~~~~-gW~~aL~~WAl~allAl~~Wl  183 (395)
T COG2807         150 AAALAVPLAQHSG-GWRGALGFWALLALLALLIWL  183 (395)
T ss_pred             HhhhhhHHHHhhc-cHHHHHHHHHHHHHHHHHHHh
Confidence            9988888777663 799998888888888876655

>PRK09848 glucuronide transporter; Provisional

Probab=98.09  E-value=8.4e-05  Score=70.22  Aligned_cols=68  Identities=24%  Similarity=0.210  Sum_probs=44.9

Q ss_pred             HHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhcc----chhHHH-HHHHH
Q 045073          165 LDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRI----GRFIIQ-LGGFL  238 (402)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~----grr~~~-~~~~~  238 (402)
                      ..........|++.|+++ .|++....+.            ...+..+...+..++.|+++||.    |||+.. +.+.+
T Consensus        20 ~~~~~~~~~~~l~~y~~~~~gl~~~~~g~------------~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~   87 (448)
T PRK09848         20 NNFAFAMGALFLLSYYTDVAGVGAAAAGT------------MLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTA   87 (448)
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHH
Confidence            334444444455556655 6898887665            77788888889999999999996    666644 44544


Q ss_pred             HHHHHH
Q 045073          239 LMSICM  244 (402)
Q Consensus       239 ~~~~~~  244 (402)
                      ...+..
T Consensus        88 ~~~~~~   93 (448)
T PRK09848         88 PLMIFS   93 (448)
T ss_pred             HHHHHH
Confidence            444333

>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors)

Probab=98.09  E-value=7.6e-05  Score=72.85  Aligned_cols=135  Identities=15%  Similarity=0.091  Sum_probs=85.6

Q ss_pred             hhhhhhhHHHhhhc-cchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhC
Q 045073          213 TVPGYWFTVFLIDR-IGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFG  291 (402)
Q Consensus       213 ~~~g~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (402)
                      .-+..+++|+++|+ +||++.+..+.++..++..++.+........              ........+...+...+..+
T Consensus        36 ~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~--------------~~~~~~~l~gLaLia~G~Gg  101 (654)
T TIGR00926        36 CYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGH--------------PLHDLLDLLGLALIALGTGG  101 (654)
T ss_pred             HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCccccc--------------chHHHHHHHHHHHHHhhccc
Confidence            33445578899996 6999999998888888777766532100000              11111111122222233344


Q ss_pred             Cccccccccccccccc---hhhhhhhHHHHHHHHhHHHHhHhHHhhhhccC-----CcchhhHHHHHHHHHHHhhhee
Q 045073          292 PNSTTFIVPAELFPAR---LRSTCHGISAAAGKAGAIVGAFGVQYYTQKGD-----KQIKQSIITLAVVNFLGFLCSF  361 (402)
Q Consensus       292 ~~~~~~~~~~e~~p~~---~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~i~~~  361 (402)
                      .-+...+...|.++++   .|.....+.....++|+++++.+.+++.+..+     .+|...|.+.+++.++++++..
T Consensus       102 iKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~  179 (654)
T TIGR00926       102 IKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFM  179 (654)
T ss_pred             cccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHH
Confidence            4566667778887643   46778888888899999999988888864321     1577888888888777766654

>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1

Probab=98.01  E-value=0.0006  Score=62.97  Aligned_cols=132  Identities=12%  Similarity=0.118  Sum_probs=84.1

Q ss_pred             HHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHH
Q 045073          171 TINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGAR  250 (402)
Q Consensus       171 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~  250 (402)
                      ++...+..|+...|+++...+.            .-....+.++.|.++..++.+|+|..+.-+++......+..+....
T Consensus       276 sf~~lmt~yl~~~G~s~~~igi------------~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~  343 (432)
T PF06963_consen  276 SFGGLMTAYLKSQGYSPSVIGI------------FRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVS  343 (432)
T ss_pred             cCcHHHHHHHHHCCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHH
Confidence            3444556677777999887555            6677788888999999999999998888888877766655544433


Q ss_pred             hhcccCCCCCCCCCCCccccCC-chHHHHHHH--HHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHH
Q 045073          251 YDSLRGKKCDPKKDPLHEYCDG-NHAWFMILY--GLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVG  327 (402)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~  327 (402)
                      .. ....              + .......++  .+..=.+-.+.--...-+..|..|++.||+..|+-+..+++...+.
T Consensus       344 ~~-~~~~--------------~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~  408 (432)
T PF06963_consen  344 FW-APGS--------------PFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLS  408 (432)
T ss_pred             Hh-cCCC--------------CchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHH
Confidence            32 2211              1 111111111  1111112223333344567899999999999999998888766655


Q ss_pred             hH
Q 045073          328 AF  329 (402)
Q Consensus       328 ~~  329 (402)
                      -.
T Consensus       409 ~~  410 (432)
T PF06963_consen  409 FV  410 (432)
T ss_pred             HH
Confidence            43

It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane

>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]

Probab=97.98  E-value=7.2e-05  Score=65.04  Aligned_cols=289  Identities=10%  Similarity=0.029  Sum_probs=141.0

Q ss_pred             hhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHHH
Q 045073            6 AVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAAL   85 (402)
Q Consensus         6 ~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~~   85 (402)
                      ++|+-+..+|+++.++.+...+..-.|...|..++..+.+                     .+..+.+..-.+......+
T Consensus       116 ysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs---------------------~~~~sy~~LN~ISL~~~~i  174 (433)
T KOG3810|consen  116 YSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVS---------------------LETLSYTTLNYISLAEVTI  174 (433)
T ss_pred             hheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhh---------------------hcccchhhhchhhHHHHHH
Confidence            5677788899999999999999999999999999988872                     2445555555665555555


Q ss_pred             HHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCcc----ccccchhhhhh-hhhHHHHHHHH
Q 045073           86 TYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEAS----TYGLFSKEFVQ-KHGLHLLGTTS  160 (402)
Q Consensus        86 ~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~  160 (402)
                      ..+...++|..+|-+..+++.++....            +.++... +.+...    ....++..+.. -..+.++.-.+
T Consensus       175 a~~~A~fLP~v~rSl~f~~~~~~~~v~------------~~e~~~~-~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSl  241 (433)
T KOG3810|consen  175 AVLLALFLPRVKRSLYFHRLEDKISVG------------DLEEMNP-QASYMSYLRGAFVLLWRDLQECYSNPRLLKWSL  241 (433)
T ss_pred             HHHHHhhCCCCchhhhhhcccccceec------------cchhcCc-cchhhHHHHHHHHHHHHHHHHHhcCchhhhhHH
Confidence            666666777666543332222211100            0111111 010011    01111111110 00113333344


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHH
Q 045073          161 TWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM  240 (402)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~  240 (402)
                      .+.....++|-...|...+-++.. +.....         ..+..-.+..+.+.++.+..|++.-.+.|..-++.+....
T Consensus       242 WwAl~scg~~QV~nY~Q~LW~~~~-~~~~~v---------yNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~  311 (433)
T KOG3810|consen  242 WWALASCGYYQVTNYTQILWKEVA-PNPANV---------YNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSA  311 (433)
T ss_pred             HHHHhhchhHHHHHHHHHHHHhhC-CCchhh---------hcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHH
Confidence            444455566666655555544443 211111         2222444555666677778888876666653333332211


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHH
Q 045073          241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAG  320 (402)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~  320 (402)
                      ..+..++....     .              .+.+.....+.++........ ++...-+++....+.-|...|+..++.
T Consensus       312 ~~agllf~m~~-----t--------------~~Iw~~Ya~yvlfr~~y~l~i-tiA~~~iA~nL~~e~~gLvFGiNTFvA  371 (433)
T KOG3810|consen  312 VQAGLLFIMAQ-----T--------------QHIWVCYAGYVLFRVIYQLTI-TIATFQIARNLSSELFGLVFGINTFVA  371 (433)
T ss_pred             Hhhhhhhhhhc-----c--------------cceehhhhhHHHHHhhHhhhh-hHHHHHHHHhhhhhhheeeeehHHHHH
Confidence            11211111111     1              233333333333333222222 223233345556666688888877665


Q ss_pred             HHhHHHHhHhHHhhhhccCC---------cchhhHHHHHHHHHHHhhhee
Q 045073          321 KAGAIVGAFGVQYYTQKGDK---------QIKQSIITLAVVNFLGFLCSF  361 (402)
Q Consensus       321 ~~g~~i~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~i~~i~~~  361 (402)
                      -+-..+-..+   ..|..+.         -+..-|.+.+++.++++.+.+
T Consensus       372 l~lQsilT~i---Vvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~  418 (433)
T KOG3810|consen  372 LILQSILTLI---VVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEY  418 (433)
T ss_pred             HHHHHhheEE---EEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHH
Confidence            5544443332   2221110         233457777777777766543

>PF12832 MFS_1_like: MFS_1 like family

Probab=97.92  E-value=8e-05  Score=50.69  Aligned_cols=65  Identities=15%  Similarity=0.113  Sum_probs=52.1

Q ss_pred             HHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHH
Q 045073          162 WFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFL  238 (402)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~  238 (402)
                      ++...........|.|.++++.|+++.+.+.            +..+..+..+++.++.|.++||+++++..+....
T Consensus         9 yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGi------------l~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~   73 (77)
T PF12832_consen    9 YFFYFAALGCLYPFLPLYLKQLGLSPSQIGI------------LSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSL   73 (77)
T ss_pred             HHHHHHHHHHHHhhhhHhhhhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHH
Confidence            3334445556677889999999999998776            7788888899999999999999999988776543

>TIGR00880 2_A_01_02 Multidrug resistance protein

Probab=97.79  E-value=7.1e-05  Score=57.78  Aligned_cols=70  Identities=19%  Similarity=0.287  Sum_probs=56.3

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      +....++.|..|+++|++..++.+....+|..+++.+++.+.                       +..+|++.+++.++.
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~  126 (141)
T TIGR00880        70 VAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLA-----------------------QFLGWRAPFLFLAIL  126 (141)
T ss_pred             HhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHh-----------------------cccchHHHHHHHHHH
Confidence            345678899999999999999999999999999999998886                       557899999887666


Q ss_pred             HHHHHHHH-hhccC
Q 045073           83 AALTYYWR-MKMPE   95 (402)
Q Consensus        83 ~~~~~~~~-~~~pe   95 (402)
                      .++..+.. ++.||
T Consensus       127 ~~~~~~~~~~~~~~  140 (141)
T TIGR00880       127 ALAAFILLAFLLPE  140 (141)
T ss_pred             HHHHHHHHhhcCCC
Confidence            66554443 34555

>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs)

Probab=97.78  E-value=3.2e-06  Score=80.71  Aligned_cols=180  Identities=11%  Similarity=0.031  Sum_probs=1.0

Q ss_pred             hhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcc
Q 045073          175 AQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSL  254 (402)
Q Consensus       175 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~  254 (402)
                      .+..+-+++++++++.+.            +.+..-++.++..++..++.+|..|-+.+-++.++++++.++++++....
T Consensus        25 ~lttiErRF~l~S~~~G~------------i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~   92 (539)
T PF03137_consen   25 SLTTIERRFGLSSSQSGL------------ISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLS   92 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhc
Confidence            345666779999998776            77888888888888888898887777888889999999999988876543


Q ss_pred             cCCCCCCC---------CCCCc----------------cccCCchHHHHHHHH---HHHHHHhhCCcccccccccccccc
Q 045073          255 RGKKCDPK---------KDPLH----------------EYCDGNHAWFMILYG---LTLFFANFGPNSTTFIVPAELFPA  306 (402)
Q Consensus       255 ~~~~~~~~---------~~~~~----------------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~e~~p~  306 (402)
                      ...+....         +..+-                .-.+........++.   ++.+.+....+++..+|+=|..++
T Consensus        93 ~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~  172 (539)
T PF03137_consen   93 GPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSK  172 (539)
T ss_dssp             -----------------------------------------------------------SSS------------------
T ss_pred             CCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecccccc
Confidence            32211100         00000                000111111222222   223333344556778889999999


Q ss_pred             chhhhhhhHHHHHHHHhHHHHhHhHHhhhhccC----------------C----cchhhHHHHHHHHHHHhhheeeeecc
Q 045073          307 RLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGD----------------K----QIKQSIITLAVVNFLGFLCSFMVPET  366 (402)
Q Consensus       307 ~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~----------------~----~~~~~~~~~~~~~~i~~i~~~~~~et  366 (402)
                      +.-+...|+......+|.++|-.+.+.....+.                .    .|+.-|++.+++.++..+..+++|+.
T Consensus       173 ~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~  252 (539)
T PF03137_consen  173 KNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKK  252 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence            988888898888888888777666655443210                0    35566677777776666666666654

Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.

>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions

Probab=97.71  E-value=0.0013  Score=62.15  Aligned_cols=144  Identities=16%  Similarity=0.073  Sum_probs=85.2

Q ss_pred             HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHH-HHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHH
Q 045073          205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSI-CMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGL  283 (402)
Q Consensus       205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (402)
                      ...+..+...+..++.|-++|+-++||.++..+...++ +.+.+.+.     .+              ..++...+++.+
T Consensus        75 ~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v-----~~--------------~~~~~~~~l~ii  135 (477)
T PF11700_consen   75 ANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFV-----SP--------------GQWWLALVLFII  135 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHh-----Cc--------------chHHHHHHHHHH
Confidence            45556666667777889999999887776655544433 33333332     11              223333333333


Q ss_pred             HHHHHhhCCccccccccccccccchh--------------------------hhhhhHHHHHHHHhHHHHhHhHHhhhhc
Q 045073          284 TLFFANFGPNSTTFIVPAELFPARLR--------------------------STCHGISAAAGKAGAIVGAFGVQYYTQK  337 (402)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~e~~p~~~r--------------------------~~~~~~~~~~~~~g~~i~~~~~~~~~~~  337 (402)
                      ...+...+ .....++..|+.+++.+                          ++..+.....+++|+.+.-.+.-.+...
T Consensus       136 a~v~~~~~-~vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~  214 (477)
T PF11700_consen  136 ANVGYEAS-NVFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVIS  214 (477)
T ss_pred             HHHHHHHH-HHHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            33332222 23466778888888777                          8999999999999988776554443322


Q ss_pred             cCC------cchhhHHHHHHHHHHHhhh-eeeeeccCC
Q 045073          338 GDK------QIKQSIITLAVVNFLGFLC-SFMVPETNG  368 (402)
Q Consensus       338 ~~~------~~~~~~~~~~~~~~i~~i~-~~~~~et~~  368 (402)
                      .+.      ..+..+.+.++..++..+. .+++|+.++
T Consensus       215 ~~~~~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~  252 (477)
T PF11700_consen  215 PGSTASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPG  252 (477)
T ss_pred             CCCccccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence            211      3466777777766554444 445576654

Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.

>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon

Probab=97.57  E-value=0.00089  Score=60.30  Aligned_cols=115  Identities=19%  Similarity=0.053  Sum_probs=71.4

Q ss_pred             hhhhhHHHhhhccc-----hhHHHH-HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHH---HHH
Q 045073          215 PGYWFTVFLIDRIG-----RFIIQL-GGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYG---LTL  285 (402)
Q Consensus       215 ~g~~~~g~l~dr~g-----rr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  285 (402)
                      +.....|+.+|+.+     ||..++ .+...+..+..+.............+.+         .+.+.......   ...
T Consensus        29 p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~---------~~~~~g~~~a~l~F~l~   99 (403)
T PF03209_consen   29 PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSS---------GPFWLGLALAALAFLLY   99 (403)
T ss_pred             HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccc---------cccHHHHHHHHHHHHHH
Confidence            45778999999988     775544 4455555544444444333322100000         12222211111   122


Q ss_pred             HHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhcc
Q 045073          286 FFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKG  338 (402)
Q Consensus       286 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~  338 (402)
                      +.+.........++++|..|++.|+++.++.....-+|.+++..+.+.+.+.+
T Consensus       100 G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~  152 (403)
T PF03209_consen  100 GLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPF  152 (403)
T ss_pred             HhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence            22222334456778999999999999999999999999999999999888865

It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.

>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age

Probab=97.57  E-value=0.0066  Score=55.28  Aligned_cols=58  Identities=12%  Similarity=0.040  Sum_probs=38.3

Q ss_pred             HHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhh
Q 045073          277 FMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYY  334 (402)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~  334 (402)
                      .+.+..+..+..++......+..+.|..|++.|..++|.....-.+|..++..+.-.+
T Consensus       337 ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l  394 (402)
T PF02487_consen  337 IVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL  394 (402)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            3333333333333333344556667778999999999999988888888777655444

The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane

>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX)

Probab=97.56  E-value=0.0039  Score=56.81  Aligned_cols=128  Identities=13%  Similarity=0.021  Sum_probs=81.3

Q ss_pred             hhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccc
Q 045073          217 YWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTT  296 (402)
Q Consensus       217 ~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (402)
                      .+....+.|.+|-|++++.+.+...+...++.+.                      .....+-+.-++.+..... -...
T Consensus        58 l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~----------------------~sv~~mq~~q~~yg~~~a~-evay  114 (412)
T PF01770_consen   58 LLPVFLLTDYLRYKPVIILQALSYIITWLLLLFG----------------------TSVLAMQLMQFFYGLATAA-EVAY  114 (412)
T ss_pred             HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH----------------------CcHHHHHHHHHHHHHHHHH-HHHH
Confidence            3466788999999999999877766666655552                      2223333333333322222 2234


Q ss_pred             ccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeeeeccC
Q 045073          297 FIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMVPETN  367 (402)
Q Consensus       297 ~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~et~  367 (402)
                      ++|+=-..|++.--++.+.+.....+|.+++..+...+......++.....+......+++++.+++|..+
T Consensus       115 ~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~  185 (412)
T PF01770_consen  115 YSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMPK  185 (412)
T ss_pred             HHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence            45555556777667778888888888888888877777664322555666666666677777777776543

Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane

>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS)

Probab=97.53  E-value=0.0029  Score=53.31  Aligned_cols=57  Identities=11%  Similarity=0.050  Sum_probs=35.7

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHHHHHHHH
Q 045073           16 RTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAALTYYWR   90 (402)
Q Consensus        16 ~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~~~~~~~   90 (402)
                      |+|+..+.+...+.++|.++....-..-....                  ......|++++.+.++..++-++..
T Consensus         2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~------------------~~~~~~W~~I~si~~lL~~IpLIly   58 (267)
T PF07672_consen    2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVV------------------IALTNNWQWILSIFILLIFIPLILY   58 (267)
T ss_pred             CccceeeeeccccchhhHHHHHhhHHhcchHH------------------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            67888888888889999888765432110000                  1123459999988776665544443

>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.47  E-value=0.00074  Score=65.52  Aligned_cols=183  Identities=11%  Similarity=-0.006  Sum_probs=113.6

Q ss_pred             hhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccC
Q 045073          177 KDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRG  256 (402)
Q Consensus       177 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (402)
                      ..+-+.+++++++.+.            +...+-++..+...+..+..-|.-|-+.+-++.++++++.++.+++......
T Consensus       121 ttiErRF~i~Ss~sG~------------I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~  188 (735)
T KOG3626|consen  121 TTIERRFKISSSQSGL------------IASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGP  188 (735)
T ss_pred             hhhhhhcCCCCCccee------------EeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCc
Confidence            3444568888887665            5566666677766777888888888888889999999999988887543322


Q ss_pred             CCCC------CCCCC------------------CccccC---Cch---HHHHHHHHHHHHHHhhCCcccccccccccccc
Q 045073          257 KKCD------PKKDP------------------LHEYCD---GNH---AWFMILYGLTLFFANFGPNSTTFIVPAELFPA  306 (402)
Q Consensus       257 ~~~~------~~~~~------------------~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~  306 (402)
                      .+.+      ..+.|                  ..+.+.   ...   +.++.+..++.+.+....++.-.+|+=|...+
T Consensus       189 y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~  268 (735)
T KOG3626|consen  189 YEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKK  268 (735)
T ss_pred             chhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccc
Confidence            1110      01111                  011111   111   11222222333333344556667777787777


Q ss_pred             chhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCC-----------------cchhhHHHHHHHHHHHhhheeeeeccCCc
Q 045073          307 RLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDK-----------------QIKQSIITLAVVNFLGFLCSFMVPETNGL  369 (402)
Q Consensus       307 ~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~i~~i~~~~~~et~~~  369 (402)
                      +.-....|+...+..+|-++|-++.+.....+.+                 .|+.-|++.+.+.++..+..+++|++.++
T Consensus       269 ~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~  348 (735)
T KOG3626|consen  269 KNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPK  348 (735)
T ss_pred             cCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCcc
Confidence            7777888888888888777777666665432210                 45667778888888888888888776555


Q ss_pred             cc
Q 045073          370 SL  371 (402)
Q Consensus       370 ~~  371 (402)
                      +.
T Consensus       349 ~~  350 (735)
T KOG3626|consen  349 SQ  350 (735)
T ss_pred             cc
Confidence            43

>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins

Probab=97.38  E-value=0.002  Score=60.28  Aligned_cols=155  Identities=14%  Similarity=0.081  Sum_probs=87.9

Q ss_pred             hhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhcc-----chhHHHHHHHHHHHHHHHHHHHHh
Q 045073          177 KDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRI-----GRFIIQLGGFLLMSICMAILGARY  251 (402)
Q Consensus       177 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-----grr~~~~~~~~~~~~~~~~~~~~~  251 (402)
                      +.+.+++|.++.+.+.            ......+ --...++.|.++|-+     .||+.++++.++..++.+.++...
T Consensus        14 ~~l~~~l~ls~~~~~~------------~~~~~~l-Pw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~   80 (433)
T PF03092_consen   14 PFLKDDLGLSPAQLQR------------LSSLASL-PWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLP   80 (433)
T ss_pred             HHHHHHcCCCHHHHHH------------HHHHHhC-chHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcc
Confidence            4455678999887443            2221111 112345789999986     355666666655544444444321


Q ss_pred             hcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccccccccc---ccchhhhhhhHHHHHHHHhHHHHh
Q 045073          252 DSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELF---PARLRSTCHGISAAAGKAGAIVGA  328 (402)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~---p~~~r~~~~~~~~~~~~~g~~i~~  328 (402)
                      .    .              ..+.....++.....++....-...-++..|..   |.+ |+...+.......+|++++.
T Consensus        81 ~----~--------------~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~  141 (433)
T PF03092_consen   81 A----S--------------ESSAAIAVVLLFLASFGYAFADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGS  141 (433)
T ss_pred             c----c--------------cchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHH
Confidence            1    0              011111111111111111111123334445553   545 78888888889999999999


Q ss_pred             HhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee-ec
Q 045073          329 FGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV-PE  365 (402)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~-~e  365 (402)
                      .+.|.+.+..  +++..|.+.+++..+..+..+++ +|
T Consensus       142 ~l~G~l~~~~--~~~~~f~i~~~~~~l~~~~~~~~~~e  177 (433)
T PF03092_consen  142 LLSGPLLDSF--GPQGVFLISAALPLLMLIVALFLLEE  177 (433)
T ss_pred             HhhhhhhhcC--CCeEEehHHHHHHHHHHHHHHHhhhh
Confidence            9999998877  77788888877777666555554 55

Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).

>TIGR00769 AAA ADP/ATP carrier protein family

Probab=97.35  E-value=0.012  Score=55.29  Aligned_cols=119  Identities=8%  Similarity=0.026  Sum_probs=70.9

Q ss_pred             hhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCC-C----CCCCCCCCc-cccC----CchHHHHHHHHHHHH
Q 045073          217 YWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGK-K----CDPKKDPLH-EYCD----GNHAWFMILYGLTLF  286 (402)
Q Consensus       217 ~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~  286 (402)
                      .++.+++++|++|++++-.........+.++++......+. +    .+.....+. +...    -..|.....+...-.
T Consensus        61 ~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~el  140 (472)
T TIGR00769        61 MLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAEL  140 (472)
T ss_pred             HHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHH
Confidence            55789999999999988877666666666655553321111 0    000000000 0000    001122222222222


Q ss_pred             HHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhh
Q 045073          287 FANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYT  335 (402)
Q Consensus       287 ~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~  335 (402)
                      .......-..|..++|.+..++-.+-.++....+++|.++++.+..++.
T Consensus       141 w~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~  189 (472)
T TIGR00769       141 WGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS  189 (472)
T ss_pred             HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            2222222268899999999999999999999999999999998877765

These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.

>TIGR00769 AAA ADP/ATP carrier protein family

Probab=97.34  E-value=0.14  Score=48.12  Aligned_cols=40  Identities=15%  Similarity=0.109  Sum_probs=35.9

Q ss_pred             hhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045073            6 AVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSG   45 (402)
Q Consensus         6 ~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~   45 (402)
                      ..++.|.++.++-.|..++...+.++|.++++.+...+.+
T Consensus       151 W~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~  190 (472)
T TIGR00769       151 WGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK  190 (472)
T ss_pred             HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999988887764

These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.

>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans

Probab=97.28  E-value=0.007  Score=47.48  Aligned_cols=107  Identities=13%  Similarity=0.006  Sum_probs=69.3

Q ss_pred             HHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHH
Q 045073          206 FLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTL  285 (402)
Q Consensus       206 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (402)
                      ..+......+++++.+.+.+++|.|+.++++.+...+-......                      .+. ..++....+.
T Consensus        43 lai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~----------------------~~~-~~l~~~s~l~   99 (156)
T PF05978_consen   43 LAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFY----------------------PNS-YTLYPASALL   99 (156)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh----------------------hhH-HHHHHHHHHH
Confidence            33444455566678889999999999999886655543332222                      222 3333333333


Q ss_pred             HHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhh
Q 045073          286 FFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYT  335 (402)
Q Consensus       286 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~  335 (402)
                      +++....+...-.++.+...++.|++-.++.-.+...+.++|....-.+.
T Consensus       100 G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~  149 (156)
T PF05978_consen  100 GFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF  149 (156)
T ss_pred             hhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44333444455567788888899999999988888888888876554443

UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].

>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters

Probab=97.18  E-value=0.0044  Score=42.64  Aligned_cols=72  Identities=13%  Similarity=0.087  Sum_probs=61.2

Q ss_pred             HHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHH
Q 045073          167 IAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAI  246 (402)
Q Consensus       167 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~  246 (402)
                      ++-+..+..+|.+.++.+++..+.+.            +.+.+.++.++|.+...++.++.++++.+..+.+...++.+.
T Consensus         6 igRFayTplLP~M~~~~~ls~~~ag~------------lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~   73 (85)
T PF06779_consen    6 IGRFAYTPLLPLMQADGGLSLSQAGW------------LASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAA   73 (85)
T ss_pred             hHHHHHHhHhHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence            44556667889999999999998776            889999999999999999999988888899888888888777


Q ss_pred             HHHH
Q 045073          247 LGAR  250 (402)
Q Consensus       247 ~~~~  250 (402)
                      +++.
T Consensus        74 ma~~   77 (85)
T PF06779_consen   74 MALT   77 (85)
T ss_pred             HHHH
Confidence            7764

Note that many members are hypothetical proteins.

>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]

Probab=97.04  E-value=0.022  Score=50.07  Aligned_cols=129  Identities=17%  Similarity=0.162  Sum_probs=75.3

Q ss_pred             HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073          205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT  284 (402)
Q Consensus       205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (402)
                      ......+...++.++.|.+.||+|||+.+..+.....++.+...+..                    .............
T Consensus        44 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~  103 (338)
T COG0477          44 LLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAP--------------------NVGLALLLILRLL  103 (338)
T ss_pred             HHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCc--------------------cchHHHHHHHHHH
Confidence            45555566666668999999999999777766654333322222211                    1011222222222


Q ss_pred             HHHHhhCCcccccccccccccc-chhhhhhhHHHH-HHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHH
Q 045073          285 LFFANFGPNSTTFIVPAELFPA-RLRSTCHGISAA-AGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVN  353 (402)
Q Consensus       285 ~~~~~~~~~~~~~~~~~e~~p~-~~r~~~~~~~~~-~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  353 (402)
                      .+.......+...++..|.+|. +.|+...+.... ...++..+++.+.+.+......+|+..+.+.....
T Consensus       104 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (338)
T COG0477         104 QGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLG  174 (338)
T ss_pred             HHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence            2332334455677788999887 678888888777 46677778876665555431116666555544444

>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1

Probab=96.78  E-value=0.066  Score=49.73  Aligned_cols=142  Identities=11%  Similarity=0.044  Sum_probs=76.2

Q ss_pred             HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHH----HHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHH
Q 045073          205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICM----AILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMIL  280 (402)
Q Consensus       205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (402)
                      ....-.+..++.+...|..+||..|.+....+.+..-++.    .++..........    .         .+.+....+
T Consensus        43 ygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~----~---------~~~~~~~~l  109 (432)
T PF06963_consen   43 YGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSS----S---------QSSWLFIAL  109 (432)
T ss_pred             HHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccc----c---------ccchHHHHH
Confidence            4555566667777788999999999888776655543332    2222222111110    0         011111111


Q ss_pred             HH---HHHHHHhhCCccccccccccc----c--ccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHH
Q 045073          281 YG---LTLFFANFGPNSTTFIVPAEL----F--PARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAV  351 (402)
Q Consensus       281 ~~---~~~~~~~~~~~~~~~~~~~e~----~--p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~  351 (402)
                      +.   ........+......+.--|.    .  .+..+....+...-+-.+..+++|++.|.+.+..  +......+.++
T Consensus       110 ~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~--s~~~~~~~i~~  187 (432)
T PF06963_consen  110 FALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFA--SPVIAAIFIAG  187 (432)
T ss_pred             HHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--CHHHHHHHHHH
Confidence            11   111111111111111211222    2  3344455555555555678999999999998866  77777777888


Q ss_pred             HHHHHhhhee
Q 045073          352 VNFLGFLCSF  361 (402)
Q Consensus       352 ~~~i~~i~~~  361 (402)
                      .++++.+.=+
T Consensus       188 ~N~~S~~vEy  197 (432)
T PF06963_consen  188 WNLASVFVEY  197 (432)
T ss_pred             HHHHHHHHHH
Confidence            8888776644

It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane

>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT)

Probab=96.71  E-value=0.22  Score=46.71  Aligned_cols=38  Identities=13%  Similarity=0.074  Sum_probs=28.8

Q ss_pred             cccccccccccccchhhhhhhHHHHHHHHhHHHHhHhH
Q 045073          294 STTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGV  331 (402)
Q Consensus       294 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~  331 (402)
                      +..+.+..+..+++.|..+..+...+-.+|-.+|+.+.
T Consensus       391 s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~  428 (437)
T TIGR00939       391 SLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS  428 (437)
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45556677778889999888888888777777777553

>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]

Probab=96.66  E-value=0.0013  Score=59.75  Aligned_cols=37  Identities=5%  Similarity=0.112  Sum_probs=29.8

Q ss_pred             chhhhhhccCcccchh-HHHHHHHHHHHHHHHHHHHHH
Q 045073            5 SAVIMSEYANKRTRGA-FIAAVFAMQGMGILFAGVISL   41 (402)
Q Consensus         5 ~~~~i~e~~~~~~Rg~-~~~~~~~~~~lG~~~~~~~~~   41 (402)
                      +-++++|.+.+++|.+ +++.+..+.++|..+|..++.
T Consensus       163 ~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~  200 (498)
T KOG0637|consen  163 CRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGS  200 (498)
T ss_pred             HHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccc
Confidence            3578888887766666 999999999999988888775

>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]

Probab=96.65  E-value=0.055  Score=50.26  Aligned_cols=42  Identities=10%  Similarity=0.025  Sum_probs=32.4

Q ss_pred             cccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhc
Q 045073          296 TFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQK  337 (402)
Q Consensus       296 ~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~  337 (402)
                      ..+.-+.+..|..-|+-+.+.|+..++|+-.-..+.-++.|.
T Consensus       426 i~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~  467 (544)
T PF13000_consen  426 IMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDY  467 (544)
T ss_pred             HHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhh
Confidence            444557788889999999999999999987766665555553

This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane

>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]

Probab=96.37  E-value=0.0016  Score=55.39  Aligned_cols=115  Identities=15%  Similarity=0.148  Sum_probs=68.7

Q ss_pred             HHHHHHhhhhhhhhhHHHhhhc-cchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHH
Q 045073          205 MFLVALFATVPGYWFTVFLIDR-IGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGL  283 (402)
Q Consensus       205 ~~~~~~~~~~~g~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (402)
                      +.+++.--.++-++++|++.|| +|-|...++-.....++-++++.-..                   .+..+.+..-.+
T Consensus        84 lYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi-------------------~~aFw~M~~GRF  144 (459)
T KOG4686|consen   84 LYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGI-------------------SHAFWTMLAGRF  144 (459)
T ss_pred             eeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchH-------------------HHHHHHHHhhhe
Confidence            4555666667777899999997 46665444433333444444333111                   112222222222


Q ss_pred             HHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhcc
Q 045073          284 TLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKG  338 (402)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~  338 (402)
                      .++.++-........|+.-.|..+.-+.++|+.....++|+.+--.+.+++.+..
T Consensus       145 ~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~  199 (459)
T KOG4686|consen  145 LFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTM  199 (459)
T ss_pred             eeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHH
Confidence            2222222222245567777888889999999999999999988777777777654

>TIGR01272 gluP glucose/galactose transporter

Probab=96.31  E-value=0.008  Score=53.67  Aligned_cols=78  Identities=14%  Similarity=0.015  Sum_probs=56.1

Q ss_pred             hhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccC--------------CcchhhHHHHHHHHH
Q 045073          289 NFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGD--------------KQIKQSIITLAVVNF  354 (402)
Q Consensus       289 ~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~  354 (402)
                      .....+....+++++.|++.+++..++...++.+|.+++|.+.+.+.....              ..|+.++++.+++.+
T Consensus        24 ~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~yl~ia~~~~  103 (310)
T TIGR01272        24 LTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEAAKVHTPYLLLAGALA  103 (310)
T ss_pred             HHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence            344556778889999999999999999999999999999999987763210              156778886666554


Q ss_pred             HHhhheeee--ecc
Q 045073          355 LGFLCSFMV--PET  366 (402)
Q Consensus       355 i~~i~~~~~--~et  366 (402)
                      +..+...+.  ||.
T Consensus       104 ~~~i~~~~~~~p~~  117 (310)
T TIGR01272       104 VLAIIFAFLPLPEL  117 (310)
T ss_pred             HHHHHHHHccCCCC
Confidence            444443333  554

Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.

>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions

Probab=96.07  E-value=1.4  Score=41.92  Aligned_cols=40  Identities=18%  Similarity=0.247  Sum_probs=35.2

Q ss_pred             hhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045073            6 AVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSG   45 (402)
Q Consensus         6 ~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~   45 (402)
                      ..+..|.++.++-.|..+++..+.++|.++++.+...+.+
T Consensus       166 W~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~  205 (491)
T PF03219_consen  166 WGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS  205 (491)
T ss_pred             HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999888888775

One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane

>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]

Probab=96.06  E-value=0.03  Score=51.27  Aligned_cols=156  Identities=16%  Similarity=0.118  Sum_probs=91.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhc----cch
Q 045073          154 HLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDR----IGR  229 (402)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr----~gr  229 (402)
                      .++......+...+++-.-..|.+.+.+.+|......+.            .-...-+..++...+.|..+||    +||
T Consensus        33 ~li~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~~S~------------iw~~gPi~G~~vQP~vG~~SDrc~sr~GR  100 (498)
T KOG0637|consen   33 KLISVASIAAGVQFGWALELSYLTPYLQSLGVPHKWSSI------------IWLCGPLSGLLVQPLVGSASDRCTSRYGR  100 (498)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccccHHHHHcCCCcccccc------------cccccccccceeccccccccccccccccc
Confidence            455555555555566666777888899999988775333            3444445566667788999996    676


Q ss_pred             hHH-HHHHHHHHHHHHHHHHHHhhc---ccCCCCCCCCCCCccccCCchHHHHHHHHHHH---HHHhhCCcccccccccc
Q 045073          230 FII-QLGGFLLMSICMAILGARYDS---LRGKKCDPKKDPLHEYCDGNHAWFMILYGLTL---FFANFGPNSTTFIVPAE  302 (402)
Q Consensus       230 r~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~e  302 (402)
                      |+. +..+.....++.+++....-.   ..+.+..           ......+.+..+..   =+........+-++..|
T Consensus       101 RRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~-----------~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~D  169 (498)
T KOG0637|consen  101 RRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERK-----------PVKPRAIVLFILGFWLLDVANNTLQGPCRALLAD  169 (498)
T ss_pred             ccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCccc-----------ccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHH
Confidence            655 444555555665555543211   1111000           01111122211111   12222334456678888


Q ss_pred             ccccchhhh-hhhHHHHHHHHhHHHHhHhHH
Q 045073          303 LFPARLRST-CHGISAAAGKAGAIVGAFGVQ  332 (402)
Q Consensus       303 ~~p~~~r~~-~~~~~~~~~~~g~~i~~~~~~  332 (402)
                      +.-.+.+.+ +.+....+..+|+.+|-.+.+
T Consensus       170 l~~~d~~~~~Ans~f~~f~avGnvLGY~~g~  200 (498)
T KOG0637|consen  170 LARGDAKKTRANSVFSFFMAVGNVLGYALGS  200 (498)
T ss_pred             hccChhhhhccchhHHHHHHhcceeeeeccc
Confidence            887766666 899998888888888776655

>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs

Probab=95.87  E-value=0.0018  Score=57.72  Aligned_cols=39  Identities=8%  Similarity=0.072  Sum_probs=2.5

Q ss_pred             CccccccccccccccchhhhhhhHHHHHHHHhHHHHhHh
Q 045073          292 PNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFG  330 (402)
Q Consensus       292 ~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~  330 (402)
                      ..+..+.+..+..+++.|..+..+...+-.+|-.+|..+
T Consensus       265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l  303 (309)
T PF01733_consen  265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL  303 (309)
T ss_dssp             --HHHH---------------------------------
T ss_pred             hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            444667777888888888888777777777776666644

Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.

>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]

Probab=95.86  E-value=0.44  Score=43.49  Aligned_cols=49  Identities=10%  Similarity=-0.008  Sum_probs=30.0

Q ss_pred             HHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhH
Q 045073          281 YGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAF  329 (402)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~  329 (402)
                      .....+...+-..+..+.++.+..|++.+-.+-.+...+-..|-+.|..
T Consensus       349 l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~  397 (406)
T KOG1479|consen  349 LMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSL  397 (406)
T ss_pred             HHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhH
Confidence            3333333333344567778888888888877766666666555555553

>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age

Probab=95.69  E-value=0.12  Score=47.38  Aligned_cols=125  Identities=17%  Similarity=0.215  Sum_probs=59.6

Q ss_pred             HHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHH
Q 045073          209 ALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFA  288 (402)
Q Consensus       209 ~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (402)
                      ..+-.++..+++.+..+|+.-+.-......++.+++++.++.                      .... +-++++.....
T Consensus        68 di~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~----------------------~~v~-~~l~Gv~las~  124 (402)
T PF02487_consen   68 DILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFS----------------------PSVW-VRLLGVVLASL  124 (402)
T ss_pred             HHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeec----------------------cchh-HHHHHHHHHhh
Confidence            344455556678888898764333334444555555555442                      1112 22233333333


Q ss_pred             hhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee
Q 045073          289 NFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF  361 (402)
Q Consensus       289 ~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~  361 (402)
                      +.+.+-+.+.-.+..+++..    .+-.......++.+|+.....+.. .+-+.+..+.+...+.++-.+..+
T Consensus       125 ssg~GE~tfL~lt~~y~~~~----l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f  192 (402)
T PF02487_consen  125 SSGLGEVTFLSLTHFYGKSS----LSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYF  192 (402)
T ss_pred             hhhhhHHHHHHHHHhcCccc----cccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHH
Confidence            33444344433455666432    222222223455566655555544 322456667766666654444444

The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane

>COG2270 Permeases of the major facilitator superfamily [General function prediction only]

Probab=95.69  E-value=0.16  Score=46.30  Aligned_cols=142  Identities=14%  Similarity=-0.020  Sum_probs=76.9

Q ss_pred             HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHH-HHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHH
Q 045073          205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSIC-MAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGL  283 (402)
Q Consensus       205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (402)
                      ...+..+...+-+++.|.++|+.|+|+..+..+....+. .+.+.+..    +               ...++..+++..
T Consensus        63 ~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~----~---------------~s~~~~~l~~~i  123 (438)
T COG2270          63 ASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIP----P---------------GSYLLLLLLFLI  123 (438)
T ss_pred             HHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhC----C---------------CchHHHHHHHHH
Confidence            444555555566667899999999777665544443333 33333321    0               123333333333


Q ss_pred             HHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhH--Hhhhh--------------ccCCcchhhHH
Q 045073          284 TLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGV--QYYTQ--------------KGDKQIKQSII  347 (402)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~--~~~~~--------------~~~~~~~~~~~  347 (402)
                      ....+.........++..++.+++.-++..++....+++|+.+.-...  .....              ..+...+.++.
T Consensus       124 l~~i~~~~s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~  203 (438)
T COG2270         124 LASIGFEFSNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGL  203 (438)
T ss_pred             HHHHhcchhheehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHH
Confidence            222222233334567778888888888888888888887776544332  11111              01114567777


Q ss_pred             HHHHHHHHHhhhee-eeec
Q 045073          348 TLAVVNFLGFLCSF-MVPE  365 (402)
Q Consensus       348 ~~~~~~~i~~i~~~-~~~e  365 (402)
                      +.++..++..+-.+ ..++
T Consensus       204 l~A~W~li~~iPm~~~v~~  222 (438)
T COG2270         204 LAALWWLLFALPMILNVHD  222 (438)
T ss_pred             HHHHHHHHHHhHHHhcccc
Confidence            77777666555444 3444

>COG3202 ATP/ADP translocase [Energy production and conversion]

Probab=95.61  E-value=1.7  Score=40.63  Aligned_cols=39  Identities=13%  Similarity=0.145  Sum_probs=33.7

Q ss_pred             hhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045073            7 VIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSG   45 (402)
Q Consensus         7 ~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~   45 (402)
                      ....|.+..++-.|..++++.+.+++.++++.+..++.+
T Consensus       171 ~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k  209 (509)
T COG3202         171 QFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK  209 (509)
T ss_pred             HHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            346788899999999999999999999999988888763

>COG3202 ATP/ADP translocase [Energy production and conversion]

Probab=95.38  E-value=1.2  Score=41.72  Aligned_cols=124  Identities=6%  Similarity=-0.023  Sum_probs=73.8

Q ss_pred             hhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCC---------CCCCc---cccCCchHHHHHH
Q 045073          213 TVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPK---------KDPLH---EYCDGNHAWFMIL  280 (402)
Q Consensus       213 ~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~---~~~~~~~~~~~~~  280 (402)
                      +++..++-.++.+++.|++++..........++++++..+...+. .+.+         ..|..   ..---+.|.....
T Consensus        75 avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~-~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~  153 (509)
T COG3202          75 AVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDI-LHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLF  153 (509)
T ss_pred             HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccc-cCCCHHHHHHHHhhCCccceeeeEeecchHHHHH
Confidence            344455677888899998888777766666666666654421111 0000         00100   0000011233333


Q ss_pred             HHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhc
Q 045073          281 YGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQK  337 (402)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~  337 (402)
                      +.+.-...+....-..|..+.|++..++-.+-+++.+...+++..++..+..++...
T Consensus       154 Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~  210 (509)
T COG3202         154 YIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH  210 (509)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            333333333333335677889999999999999999999999998888877777653

>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters

Probab=95.29  E-value=0.09  Score=48.33  Aligned_cols=117  Identities=12%  Similarity=-0.021  Sum_probs=73.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccc---
Q 045073          231 IIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPAR---  307 (402)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~---  307 (402)
                      +.++++.++..++.+++.+........+            +.....+.+.+ .....+.++.=+...++.+|.++++   
T Consensus         2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~------------~~~~~~~~~gL-~lia~G~G~~K~ni~~~~~dq~~~~~~~   68 (372)
T PF00854_consen    2 KTILLGSIVYLLGHVLLTLSAIPPSLPS------------GIQLGLFYIGL-ALIAVGTGGIKPNISPFGADQYDEDDDS   68 (372)
T ss_dssp             HHHHHHHHHHHHHHHH--HHHTSSSC------------------CHHHHHH-HHHHHHHHCCHHHHHHHHHHCSSTTTTT
T ss_pred             HhhhHHHHHHHHHHHHhHHHHhcchhhh------------hHHHHHHHHHH-HHHHhccccccccHHHHHHHHhcccchh
Confidence            3456677777777777555443221100            01111222222 2233445555667777888888765   


Q ss_pred             hhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheee
Q 045073          308 LRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFM  362 (402)
Q Consensus       308 ~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~  362 (402)
                      .|...........++|..++....+++.+..  +|...|.+.++..+++.+..+.
T Consensus        69 ~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~--~~~~~f~i~~~~~~~~~~~f~~  121 (372)
T PF00854_consen   69 RRDSFFNWFYWGINIGSLFSPTLVPYIQQNY--GWFLGFGIPAIGMLLALIVFLS  121 (372)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS---HHHHHHHHHHHHHHHHHHHHC
T ss_pred             hhhhhHHHHHHHHhhhhHhhcccchhhcccc--chhhhhhHHHHHHHHHHHHHHh
Confidence            4667778888889999999999999998777  8999999988888877766554

The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.

>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions

Probab=95.10  E-value=0.39  Score=45.54  Aligned_cols=123  Identities=10%  Similarity=-0.011  Sum_probs=70.6

Q ss_pred             hhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCC-CCC----C-CCCCCccccC----CchHHHHHHHHH
Q 045073          214 VPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGK-KCD----P-KKDPLHEYCD----GNHAWFMILYGL  283 (402)
Q Consensus       214 ~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~-~~~~~~~~~~----~~~~~~~~~~~~  283 (402)
                      ++...+-.+++++++|.+++.+..........++++..+...+. +.+    . ....+.+...    -..|.....+..
T Consensus        73 ~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~  152 (491)
T PF03219_consen   73 ILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVM  152 (491)
T ss_pred             HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHH
Confidence            33344678999999999988777666666666666543311110 000    0 0000000000    001111122222


Q ss_pred             HHHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhh
Q 045073          284 TLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQ  336 (402)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~  336 (402)
                      .-..++....-..|.+++|.++.++-.+-.++....+++|.+++..+.....+
T Consensus       153 aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~  205 (491)
T PF03219_consen  153 AELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS  205 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            22222222222468899999999999999999999999999999887777666

One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane

>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]

Probab=94.73  E-value=1.9  Score=41.91  Aligned_cols=145  Identities=18%  Similarity=0.182  Sum_probs=79.8

Q ss_pred             hhhhhhhhHHHhhhc-cchhHHHHHHHHHHHHHHHHHHHHhhcccCC--CCCCCCCCCccccCCchHH-HHHHHHH--HH
Q 045073          212 ATVPGYWFTVFLIDR-IGRFIIQLGGFLLMSICMAILGARYDSLRGK--KCDPKKDPLHEYCDGNHAW-FMILYGL--TL  285 (402)
Q Consensus       212 ~~~~g~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~  285 (402)
                      ......+++++++|. +||-+.+.++.++..++..++..........  .+  +..+....|+...-. ..+++..  ..
T Consensus        85 ~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~--~~~~~~~~c~~~s~~q~~~~~~~l~li  162 (571)
T KOG1237|consen   85 TQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMC--KFKPGGNVCESPSKLQLAVLYGALYLI  162 (571)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccc--cCCCCCCcccCcchHHHHHHHHHHHHh
Confidence            344455678899997 4888888888877777765555443322111  00  000011111122211 1222221  12


Q ss_pred             HHHhhCCcccccccccccccc----chhh--hhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhh
Q 045073          286 FFANFGPNSTTFIVPAELFPA----RLRS--TCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLC  359 (402)
Q Consensus       286 ~~~~~~~~~~~~~~~~e~~p~----~~r~--~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~  359 (402)
                      ..+..+.-+...+.-+|-++.    +.+.  .-+.......++|..++..+..+..+..  +|...|.+..+..+++.++
T Consensus       163 a~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~--~w~lgf~i~~~~~~lai~i  240 (571)
T KOG1237|consen  163 ALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNV--GWKLGFGIPTVLNALAILI  240 (571)
T ss_pred             eeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcc--cceeeccHHHHHHHHHHHH
Confidence            223445556667777888872    2223  4456666667777777777777776665  7877777777766665544


Q ss_pred             e
Q 045073          360 S  360 (402)
Q Consensus       360 ~  360 (402)
                      .
T Consensus       241 F  241 (571)
T KOG1237|consen  241 F  241 (571)
T ss_pred             H
Confidence            3

>KOG3762 consensus Predicted transporter [General function prediction only]

Probab=94.60  E-value=0.016  Score=54.05  Aligned_cols=67  Identities=16%  Similarity=0.080  Sum_probs=50.6

Q ss_pred             HHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHH
Q 045073          165 LDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSIC  243 (402)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~  243 (402)
                      ....+-.....++.+++++|+++...+.            +....-+..+++.+++|+++||+.+|+.++++..+..+.
T Consensus        23 ~~~~~g~l~pll~vy~kQLGl~p~~~Gt------------l~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~   89 (618)
T KOG3762|consen   23 FGARFGSLFPLLAVYFKQLGLNPAVVGT------------LTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVT   89 (618)
T ss_pred             eeecccccchHHHHHHHHcCCCHHHhhh------------hhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHH
Confidence            3344455666778899999999998776            667777888899999999999998777666665544433

>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters

Probab=94.33  E-value=0.28  Score=45.13  Aligned_cols=66  Identities=14%  Similarity=0.180  Sum_probs=49.6

Q ss_pred             cchhhhhhccCcc---cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhH
Q 045073            4 LSAVIMSEYANKR---TRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGA   80 (402)
Q Consensus         4 ~~~~~i~e~~~~~---~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~   80 (402)
                      ....+++|-++++   +|.+....+..+.++|.+++..+..++.                       ++.||.+.|.++.
T Consensus        53 ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~-----------------------~~~~~~~~f~i~~  109 (372)
T PF00854_consen   53 NISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQ-----------------------QNYGWFLGFGIPA  109 (372)
T ss_dssp             HHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHH-----------------------HCS-HHHHHHHHH
T ss_pred             cHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhc-----------------------cccchhhhhhHHH
Confidence            3456778888765   4666777888999999999988887775                       6789999999988


Q ss_pred             HHHHHHHHHHhh
Q 045073           81 VPAALTYYWRMK   92 (402)
Q Consensus        81 i~~~~~~~~~~~   92 (402)
                      +..+++++.+..
T Consensus       110 ~~~~~~~~~f~~  121 (372)
T PF00854_consen  110 IGMLLALIVFLS  121 (372)
T ss_dssp             HHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHh
Confidence            777766655433

The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.

>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]

Probab=93.83  E-value=2.7  Score=38.49  Aligned_cols=30  Identities=10%  Similarity=-0.208  Sum_probs=16.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhhc
Q 045073          154 HLLGTTSTWFLLDIAFYTINLAQKDIYPAT  183 (402)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (402)
                      ..+..++...+.....+.+.+-.+++.+++
T Consensus        19 v~~i~~llGiG~LlpWN~fiTa~~y~~~~~   48 (406)
T KOG1479|consen   19 VYLIFLLLGIGTLLPWNMFITASDYYYYRF   48 (406)
T ss_pred             HHHHHHHHhcccccchHhhhccHHHHHhhc
Confidence            344444444455556666666666666553

>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]

Probab=93.80  E-value=0.75  Score=41.51  Aligned_cols=44  Identities=7%  Similarity=-0.008  Sum_probs=35.6

Q ss_pred             ccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhcc
Q 045073          295 TTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKG  338 (402)
Q Consensus       295 ~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~  338 (402)
                      ..++..+.+.++...|+-+.+.++..++|+-.-..+..++.|..
T Consensus       389 ~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~l  432 (510)
T KOG3574|consen  389 SGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGL  432 (510)
T ss_pred             HHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccC
Confidence            34556688899999999999999999999887777777776644

>KOG3098 consensus Uncharacterized conserved protein [Function unknown]

Probab=93.66  E-value=1  Score=42.16  Aligned_cols=106  Identities=11%  Similarity=-0.035  Sum_probs=72.4

Q ss_pred             HHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHH
Q 045073          206 FLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTL  285 (402)
Q Consensus       206 ~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (402)
                      ..+......+.+++++.+.|+++.|+.+.++........+.+...                      +. .+........
T Consensus        56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~----------------------N~-y~~yfssall  112 (461)
T KOG3098|consen   56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP----------------------NS-YYLYFSSALL  112 (461)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc----------------------ch-HHHHHHHHHh
Confidence            445555666777889999999999999998876655544433332                      11 3333334343


Q ss_pred             HHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhh
Q 045073          286 FFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYY  334 (402)
Q Consensus       286 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~  334 (402)
                      +++....+...-.|.+|..+.+.+.+-.++.-.+...+.++|......+
T Consensus       113 G~Gaallw~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~  161 (461)
T KOG3098|consen  113 GFGAALLWTGQGGYLTSNSTRETIERNISIFWAIGQSSLIIGGIILFIY  161 (461)
T ss_pred             hhhHHheecccceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhheee
Confidence            4433344445667889999999999999999999998888887554433

>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors)

Probab=93.40  E-value=9.2  Score=38.10  Aligned_cols=72  Identities=15%  Similarity=0.148  Sum_probs=47.2

Q ss_pred             CcchhhhhhccCcc---cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHh
Q 045073            3 PLSAVIMSEYANKR---TRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFG   79 (402)
Q Consensus         3 ~~~~~~i~e~~~~~---~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~   79 (402)
                      |...+...|-++++   +|-....++..+.++|.++++.+..++......                .....+|...|.+.
T Consensus       104 p~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~----------------fg~~~~~~~aF~i~  167 (654)
T TIGR00926       104 PCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGC----------------FGCQDCYPLAFGVP  167 (654)
T ss_pred             cCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc----------------cccCcchHHHHHHH
Confidence            34556677777654   366677788888889988888887776421100                01245799999997


Q ss_pred             HHHHHHHHHHH
Q 045073           80 AVPAALTYYWR   90 (402)
Q Consensus        80 ~i~~~~~~~~~   90 (402)
                      ++..++.++..
T Consensus       168 ~i~m~ia~lvf  178 (654)
T TIGR00926       168 AILMILALIVF  178 (654)
T ss_pred             HHHHHHHHHHH
Confidence            77766655443

>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]

Probab=93.33  E-value=1.2  Score=40.22  Aligned_cols=68  Identities=18%  Similarity=0.118  Sum_probs=39.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhh-----cc
Q 045073          153 LHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLID-----RI  227 (402)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~d-----r~  227 (402)
                      +.+..+.+.+..+.+.+-... ..|.+++.-|.|-++.+.            ......  -..--++...++|     |+
T Consensus        31 ~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~------------fS~ay~--P~sLKllWaPiVDs~y~k~~   95 (510)
T KOG3574|consen   31 SSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAI------------FSFAYW--PFSLKLLWAPIVDSVYSKRF   95 (510)
T ss_pred             hhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhh------------hhhhhh--HHHHHHHHHhhhHHHHHHhh
Confidence            456667777777765553333 779888877776555332            111111  0111235777888     99


Q ss_pred             chhHHHHH
Q 045073          228 GRFIIQLG  235 (402)
Q Consensus       228 grr~~~~~  235 (402)
                      |||+..++
T Consensus        96 GrrksWvv  103 (510)
T KOG3574|consen   96 GRRKSWVV  103 (510)
T ss_pred             ccccceee
Confidence            99986543

>PRK03612 spermidine synthase; Provisional

Probab=93.08  E-value=4.1  Score=39.33  Aligned_cols=42  Identities=17%  Similarity=0.196  Sum_probs=26.6

Q ss_pred             hhhhhHHHHHHHHhHHHHhHhHHhhhh-ccCCcchhhHHHHHHHH
Q 045073          310 STCHGISAAAGKAGAIVGAFGVQYYTQ-KGDKQIKQSIITLAVVN  353 (402)
Q Consensus       310 ~~~~~~~~~~~~~g~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~  353 (402)
                      +...|-......+|+++|+++.+.+.- ..  |.....++.+.+.
T Consensus       144 g~~~g~ly~~ntlGa~~G~l~~~~vLlp~l--G~~~t~~~~a~l~  186 (521)
T PRK03612        144 GHNVATVLAADYLGALVGGLAFPFLLLPRL--GLIRTAALTGSLN  186 (521)
T ss_pred             hhhhhhhHhHHhHHHHHHHHHHHHHHHHhc--chHHHHHHHHHHH
Confidence            455677788888899988887776543 34  4444444444433

>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]

Probab=92.98  E-value=1.6  Score=41.04  Aligned_cols=34  Identities=6%  Similarity=-0.045  Sum_probs=18.5

Q ss_pred             ccccccccchhhhhhhHHHHHHHHhHHHHhHhHH
Q 045073          299 VPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQ  332 (402)
Q Consensus       299 ~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~  332 (402)
                      ++-.+..++.++-|.........+|.+++-.++-
T Consensus       142 WALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFl  175 (544)
T PF13000_consen  142 WALTMLSPENVGYASTCQTVGQTAGYFLSFTVFL  175 (544)
T ss_pred             hhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHH
Confidence            3444556677777655444444555555554443

This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane

>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function

Probab=91.83  E-value=9.5  Score=34.41  Aligned_cols=41  Identities=15%  Similarity=0.128  Sum_probs=23.0

Q ss_pred             HHHHHHhhhhhhhhhHHHhh-hccchhHHHHHHHHHHHHHHH
Q 045073          205 MFLVALFATVPGYWFTVFLI-DRIGRFIIQLGGFLLMSICMA  245 (402)
Q Consensus       205 ~~~~~~~~~~~g~~~~g~l~-dr~grr~~~~~~~~~~~~~~~  245 (402)
                      +..-..++.++|+.+..++. ++......+.....+.++++.
T Consensus       283 IFssFM~a~MlGS~lf~~l~s~~~~~e~~l~~v~~~aa~~l~  324 (354)
T PF05631_consen  283 IFSSFMVAMMLGSSLFSRLLSKSLRPESLLRYVFAVAAVSLA  324 (354)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence            56666777888888776554 444444444444444344433

>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT)

Probab=90.46  E-value=2.4  Score=39.89  Aligned_cols=25  Identities=32%  Similarity=0.340  Sum_probs=11.6

Q ss_pred             hhhhhhhhHHHhhhccchhHHHHHH
Q 045073          212 ATVPGYWFTVFLIDRIGRFIIQLGG  236 (402)
Q Consensus       212 ~~~~g~~~~g~l~dr~grr~~~~~~  236 (402)
                      ..++..+....+..|+..|.-+..+
T Consensus        57 ~~l~~~~~~~~~~~~i~~~~Ri~~~   81 (437)
T TIGR00939        57 PSLLFNSLNLFLIFRIPVTVRLLGG   81 (437)
T ss_pred             HHHHHHHHHHHHhhccCccchhHHH
Confidence            3333334455566666553333334

>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins

Probab=87.56  E-value=1.9  Score=37.00  Aligned_cols=67  Identities=18%  Similarity=0.212  Sum_probs=45.0

Q ss_pred             hhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHHHHHH
Q 045073            7 VIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVPAALT   86 (402)
Q Consensus         7 ~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~~~~~   86 (402)
                      ....+.+| ++||++.++.-...+++..+-..+...+.                       +...-+..+++...+.++.
T Consensus       119 vt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f-----------------------~~~~~~fll~la~~~~~v~  174 (250)
T PF06813_consen  119 VTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFF-----------------------GDDPSSFLLFLAVLPAVVC  174 (250)
T ss_pred             HHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHc-----------------------CCChHHHHHHHHHHHHHHH
Confidence            33457777 58999999999999998887777666554                       2233445555566666666


Q ss_pred             HHHHhhccCCc
Q 045073           87 YYWRMKMPETA   97 (402)
Q Consensus        87 ~~~~~~~pesp   97 (402)
                      ++..++++..|
T Consensus       175 l~~~~~vr~~~  185 (250)
T PF06813_consen  175 LVAMFFVRPVP  185 (250)
T ss_pred             HHHhhheeccC
Confidence            66655654443

>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]

Probab=87.03  E-value=0.48  Score=40.53  Aligned_cols=46  Identities=15%  Similarity=0.117  Sum_probs=28.1

Q ss_pred             hhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHH
Q 045073          179 IYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGG  236 (402)
Q Consensus       179 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~  236 (402)
                      +++.+|+...+.+.            +.+......++...+.|-++||.|||+.-..-
T Consensus        63 LYstYgFgkG~Igq------------LfiaGfgSsmLFGtivgSLaDkqGRKracvty  108 (454)
T KOG4332|consen   63 LYSTYGFGKGDIGQ------------LFIAGFGSSMLFGTIVGSLADKQGRKRACVTY  108 (454)
T ss_pred             eehhcCccCCccce------------eeecccchHHHHHHHHHHHHhhhccccceeee
Confidence            34556666555433            33333444455556788899999999875544

>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]

Probab=84.96  E-value=41  Score=32.99  Aligned_cols=36  Identities=11%  Similarity=0.102  Sum_probs=29.8

Q ss_pred             cccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhc
Q 045073          302 ELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQK  337 (402)
Q Consensus       302 e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~  337 (402)
                      +-+|++.|+.+.++......+|..++..+.......
T Consensus       485 ~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~  520 (571)
T KOG1237|consen  485 SQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQFS  520 (571)
T ss_pred             hhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            457999999999999999999999999877554443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	402
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.6 bits (94), Expect = 8e-04
 Identities = 75/466 (16%), Positives = 139/466 (29%), Gaps = 148/466 (31%)

Query: 24  AVFAMQGMG--ILFA------GVISLIFSGIF-LHV--YNAP--------AFNRNHVLSA 64
            +  + G G   +         V   +   IF L++   N+P                + 
Sbjct: 154 LIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNW 213

Query: 65  QPQGDYLWRIVLMFGAVPAALTYYWRMKMPETARY-TAL-----VEGNQKKAAVDM-AKV 117
             + D+   I L   ++ A L    + K      Y   L     V+  +   A ++  K+
Sbjct: 214 TSRSDHSSNIKLRIHSIQAELRRLLKSK-----PYENCLLVLLNVQNAKAWNAFNLSCKI 268

Query: 118 LDT--DLTVA---TSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTI 172
           L T     V    ++A    +S +  +  L   E        LL     +  LD     +
Sbjct: 269 LLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE-----VKSLL---LKY--LDCRPQDL 318

Query: 173 NLAQKDIYP-ATGIVRKAAAM---------------DAIEEVFRIS---------KAMFL 207
                   P    I+  A ++               D +  +   S         + MF 
Sbjct: 319 PREVLTTNPRRLSII--AESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFD 376

Query: 208 -VALF---ATVPG-----YWFTV---------------FLIDRIG-RFIIQLGGFLLMSI 242
            +++F   A +P       WF V                L+++      I +   + + +
Sbjct: 377 RLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPS-IYLEL 435

Query: 243 CMAILGARY------DSLRGKKCDPKKDPLHEYCDGNHAWFMILYGL---------TLF- 286
            + +           D     K     D +  Y D       I + L         TLF 
Sbjct: 436 KVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSH-IGHHLKNIEHPERMTLFR 494

Query: 287 --FANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGV--QY--YTQKGDK 340
             F +F      F+        ++R        A   +G+I+        Y  Y    D 
Sbjct: 495 MVFLDFR-----FL------EQKIRHDS----TAWNASGSILNTLQQLKFYKPYICDNDP 539

Query: 341 QIKQSIITLAVVNFL-----GFLCSFMVPETNGLSLEELSGEDKEI 381
           + ++ +  +  ++FL       +CS     T+ L +  L  ED+ I
Sbjct: 540 KYERLVNAI--LDFLPKIEENLICS---KYTDLLRI-ALMAEDEAI 579

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	402
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	100.0
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	99.91
3o7q_A	438	L-fucose-proton symporter; transporter, multi-PASS	99.86
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	99.82
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	99.78
2cfq_A	417	Lactose permease; transport, transport mechanism,	99.75
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	99.64
2xut_A	524	Proton/peptide symporter family protein; transport	99.63
3o7q_A	438	L-fucose-proton symporter; transporter, multi-PASS	99.61
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	99.57
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	99.52
2xut_A	524	Proton/peptide symporter family protein; transport	99.43
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	99.29
2cfq_A	417	Lactose permease; transport, transport mechanism,	98.88

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=100.00  E-value=4.8e-33  Score=263.89  Aligned_cols=331  Identities=17%  Similarity=0.181  Sum_probs=230.6

Q ss_pred             CCcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHH
Q 045073            2 YPLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAV   81 (402)
Q Consensus         2 ~~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i   81 (402)
                      ++++++|++|++|+++|++..++.+.+..+|.++++.++..+.......               ......||+.+.+..+
T Consensus       144 ~~~~~~~i~E~~p~~~rg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~  208 (491)
T 4gc0_A          144 SMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDAS---------------WLNTDGWRYMFASECI  208 (491)
T ss_dssp             HHHHHHHHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTT---------------TTTTTHHHHHHHTTHH
T ss_pred             HHHHHHHHHhhCCHHhhhhhHHhhhhhhhhhhhhhhhcchhhccccccc---------------cccchhhHHHhhhhhh
Confidence            3567899999999999999999999999999999999988876332211               2245689999999999


Q ss_pred             HHHHHHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073           82 PAALTYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST  161 (402)
Q Consensus        82 ~~~~~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (402)
                      ++++.++..+++||||||+.. +++.+++.+.+++..+++..++.....+  +......+........+.++........
T Consensus       209 ~~~~~~~~~~~~peSp~~L~~-~~~~~~a~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (491)
T 4gc0_A          209 PALLFLMLLYTVPESPRWLMS-RGKQEQAEGILRKIMGNTLATQAVQEIK--HSLDHGRKTGGRLLMFGVGVIVIGVMLS  285 (491)
T ss_dssp             HHHHHHHHGGGSCCCHHHHHH-TTCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHTTHHHHSCCTHHHHHHHHH
T ss_pred             hhhhhhhhhhcCCCChHHHHH-cCchhHHHHhHHHhcCCchhHHHHHHHH--HHHHhhhhhhhHHHHhcccHHHHHHHHH
Confidence            999999999999999999854 5555666565555443322111100000  0000000000111111122334444555


Q ss_pred             HHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHH
Q 045073          162 WFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMS  241 (402)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~  241 (402)
                      .+.+..+.+....|.+.+.+..+.+......            ......+..+++.+++++++||+|||+.++.+...+.
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~dr~Grr~~~~~~~~~~~  353 (491)
T 4gc0_A          286 IFQQFVGINVVLYYAPEVFKTLGASTDIALL------------QTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMA  353 (491)
T ss_dssp             HHHHHTCHHHHHHHHHHHHHHSSCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHH
T ss_pred             HHHHHhhhhHHHhcchHHHHhcCCCccchhh------------HHHHHHHHHHHHHHHHHHHHHhhcCcchhccchHHHH
Confidence            5556667777888888888887777664333            5556677788888899999999999999999988888


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHHH
Q 045073          242 ICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGK  321 (402)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~  321 (402)
                      ++++.++......                 ......+....+...++..+..++.+.+.+|++|++.|+++.|+.+..++
T Consensus       354 ~~~~~l~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~fPt~~R~~~~g~~~~~~~  416 (491)
T 4gc0_A          354 IGMFSLGTAFYTQ-----------------APGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQW  416 (491)
T ss_dssp             HHHHHHHHHHHTT-----------------CCHHHHHHHHHHHHHHHHTTTTHHHHHHHHHSSCTTTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcc-----------------cchHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHH
Confidence            8777666543311                 22223333333344445667778889999999999999999999999999


Q ss_pred             HhHHHHhHhHHhhhhccC----CcchhhHHHHHHHHHHHhhhee-eeeccCCccccccccchh
Q 045073          322 AGAIVGAFGVQYYTQKGD----KQIKQSIITLAVVNFLGFLCSF-MVPETNGLSLEELSGEDK  379 (402)
Q Consensus       322 ~g~~i~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~i~~~-~~~et~~~~~~~~~~~~~  379 (402)
                      +++++++.+++.+.+...    .+...+|++++++++++.++.+ ++||||++++||+++.-+
T Consensus       417 ~~~~i~~~~~p~l~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~PETkg~tLeei~~~f~  479 (491)
T 4gc0_A          417 LANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWE  479 (491)
T ss_dssp             HHHHHHHTHHHHHCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHCCCCTTCCHHHHGGGTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHheecCCCCCCHHHHHHHhC
Confidence            999999988877654210    0445678888888888888776 569999999999876633

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1

Probab=99.91  E-value=1.7e-24  Score=202.72  Aligned_cols=289  Identities=14%  Similarity=0.153  Sum_probs=194.4

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCch-hHHHHHHhHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYL-WRIVLMFGAV   81 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Wr~~f~~~~i   81 (402)
                      +...+++.|++|+++|++++++.+.+..+|.++++.+++.+.                       +..+ ||+.|++.++
T Consensus       138 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-----------------------~~~g~w~~~f~~~~~  194 (451)
T 1pw4_A          138 PPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGM-----------------------AWFNDWHAALYMPAF  194 (451)
T ss_dssp             HHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHH-----------------------HHTCCSTTCTHHHHH
T ss_pred             chHHHHHHHHCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------HHhccHHHHHHHHHH
Confidence            456789999999999999999999999999999999998876                       4456 9999999777


Q ss_pred             HHHHH-HHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHH
Q 045073           82 PAALT-YYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTS  160 (402)
Q Consensus        82 ~~~~~-~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (402)
                      ++++. ++..+++||+|+...  ..+.++..        .+.+++   .++.++++....+...+...++  +.++...+
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  259 (451)
T 1pw4_A          195 CAILVALFAFAMMRDTPQSCG--LPPIEEYK--------NDYPDD---YNEKAEQELTAKQIFMQYVLPN--KLLWYIAI  259 (451)
T ss_dssp             HHHHHHHHHHHHCCCSSTTTC--CCSCTTTC--------CC----------------CCTHHHHHHTSSC--HHHHHHHH
T ss_pred             HHHHHHHHHHhhccCCHhhcC--CCChhhhc--------cccccc---chhhhhcccccccchHHHHHcC--HHHHHHHH
Confidence            76654 445567899987521  11111000        000000   0000001111111111122221  24555555


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhcc--chhHHHHHHH
Q 045073          161 TWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRI--GRFIIQLGGF  237 (402)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~--grr~~~~~~~  237 (402)
                      ..+......+....+.|.++++ .|++..+.+.            ......++.+++.++.+++.||+  |||+.+..+.
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------------~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~  327 (451)
T 1pw4_A          260 ANVFVYLLRYGILDWSPTYLKEVKHFALDKSSW------------AYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFF  327 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHH
Confidence            6666666777888899999887 7888876555            67777888999999999999999  9998887766


Q ss_pred             HHHH-HHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHH
Q 045073          238 LLMS-ICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGIS  316 (402)
Q Consensus       238 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~  316 (402)
                      .+.. ++.+++..     ..               ........+.....+++..+..+....+..|.+|++.|+++.|+.
T Consensus       328 ~~~~~~~~~~~~~-----~~---------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  387 (451)
T 1pw4_A          328 MTLVTIATIVYWM-----NP---------------AGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFT  387 (451)
T ss_dssp             HHHHHHHHHHTTS-----CC---------------TTCHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSCTTHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH-----hc---------------ccCHHHHHHHHHHHHHHHhchHHHHHHHHHHHhchhhhhhHHHHH
Confidence            5544 33222211     10               111222222223333333344455677889999999999999999


Q ss_pred             HHHHHH-hHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073          317 AAAGKA-GAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV  363 (402)
Q Consensus       317 ~~~~~~-g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~  363 (402)
                      +....+ |..++|.+.+.+.+..  ++...|++.+++.+++.++.+++
T Consensus       388 ~~~~~~~g~~~~~~~~g~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~  433 (451)
T 1pw4_A          388 GLFGYLGGSVAASAIVGYTVDFF--GWDGGFMVMIGGSILAVILLIVV  433 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSS--CSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhc--CcHHHHHHHHHHHHHHHHHHHHH
Confidence            999999 9999999999999987  78889998888888887776655

>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*

Probab=99.86  E-value=2.8e-20  Score=173.39  Aligned_cols=286  Identities=12%  Similarity=0.002  Sum_probs=177.7

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHH-hhhhccccCccccc-ccccc-c-CCCCCchhHHHHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFS-GIFLHVYNAPAFNR-NHVLS-A-QPQGDYLWRIVLMF   78 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~-~~~~~~~~~~~~~~-~~~~~-~-~~~~~~~Wr~~f~~   78 (402)
                      +...++++|++|+++|++++++.+.+..+|.++++.+++.+. ...+.. ++..... .+... . ......+||+.|++
T Consensus       136 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~  214 (438)
T 3o7q_A          136 TAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQ-SQDVLDKMSPEQLSAYKHSLVLSVQTPYMI  214 (438)
T ss_dssp             HHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHTTHHHHTSSCCC-CHHHHHHSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-cccccccCCcchhhhhhhhhhhhHHHHHHH
Confidence            456789999999999999999999999999999999998886 211000 0000000 00000 0 00001129999987


Q ss_pred             hHHHHHHHHHHHh--hccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHH
Q 045073           79 GAVPAALTYYWRM--KMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLL  156 (402)
Q Consensus        79 ~~i~~~~~~~~~~--~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (402)
                      .++..++..+..+  ..||+++..   +++++                           +....+.++...+++   .++
T Consensus       215 ~~~~~~~~~~~~~~~~~p~~~~~~---~~~~~---------------------------~~~~~~~~~~~~~~~---~~~  261 (438)
T 3o7q_A          215 IVAIVLLVALLIMLTKFPALQSDN---HSDAK---------------------------QGSFSASLSRLARIR---HWR  261 (438)
T ss_dssp             HHHHHHHHHHHHHHCCCCCCTTTC---CCCSS---------------------------TTSHHHHHHHHTTCS---HHH
T ss_pred             HHHHHHHHHHHHHHHcCCcccccc---ccccc---------------------------ccchhhhHHHHHhCh---HHH
Confidence            5555544333332  256654320   00000                           000000111111111   333


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhh-hhhc-CcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHH
Q 045073          157 GTTSTWFLLDIAFYTINLAQKDI-YPAT-GIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQL  234 (402)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~  234 (402)
                      ...+..+......+....+.|.+ +++. |.+..+.+.            ......++.+++.++.++++||+|||+.+.
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------------~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~  329 (438)
T 3o7q_A          262 WAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAAN------------YLTGTMVCFFIGRFTGTWLISRFAPHKVLA  329 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhccCCcchhHHHH------------HHHHHHHHHHHHHHHHHHHHHHhcchHHHH
Confidence            44444445555666777788888 7664 888876555            667778888999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhh
Q 045073          235 GGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHG  314 (402)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~  314 (402)
                      .+.++..++.+++...                     ... .....+ ...+++.....+..+++..|.+|++ |+.+.+
T Consensus       330 ~~~~~~~~~~~~~~~~---------------------~~~-~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~  385 (438)
T 3o7q_A          330 AYALIAMALCLISAFA---------------------GGH-VGLIAL-TLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSS  385 (438)
T ss_dssp             HHHHHHHHHHHHHHHC---------------------CHH-HHHHHH-HHHHHHHTTHHHHHHHHHHSSCGGG-HHHHHH
T ss_pred             HHHHHHHHHHHHHHHc---------------------CCc-HHHHHH-HHHHHHHHHHHHHHHHHHHhhcccc-ccchhh
Confidence            8887776666554442                     122 222222 2223334445567888889999977 888888


Q ss_pred             HHHHHHHHhHHHHhHhHHhhhhccCCc-chhhHHHHHHHHHHHhhhee
Q 045073          315 ISAAAGKAGAIVGAFGVQYYTQKGDKQ-IKQSIITLAVVNFLGFLCSF  361 (402)
Q Consensus       315 ~~~~~~~~g~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~~  361 (402)
                      +.. .+.+++.++|.+.+.+.+..  + ++..|.+.+++.++..++.+
T Consensus       386 ~~~-~~~~g~~~~~~~~g~l~~~~--g~~~~~~~~~~~~~~~~~~~~~  430 (438)
T 3o7q_A          386 FIV-MTIIGGGIVTPVMGFVSDAA--GNIPTAELIPALCFAVIFIFAR  430 (438)
T ss_dssp             HHH-HTTHHHHHHHHHHHHHHHHH--TSSGGGGHHHHHHHHHHHHHHT
T ss_pred             HHH-HHHHHHHHHHHHHHHHHHHh--cchHHHHHHHHHHHHHHHHHHH
Confidence            877 67799999999999999987  5 88888876666555544433

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}

Probab=99.82  E-value=1.2e-19  Score=171.66  Aligned_cols=312  Identities=8%  Similarity=-0.038  Sum_probs=169.3

Q ss_pred             CcchhhhhhccCccc--chhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhH
Q 045073            3 PLSAVIMSEYANKRT--RGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGA   80 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~--Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~   80 (402)
                      +...++++|++|+++  |+.+.++++.+..+|.++++.+++.+.                       +..+||+.|++.+
T Consensus       127 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~-----------------------~~~g~~~~f~~~~  183 (491)
T 4aps_A          127 PNVSTLVGTLYDEHDRRRDAGFSIFVFGINLGAFIAPLIVGAAQ-----------------------EAAGYHVAFSLAA  183 (491)
T ss_dssp             HHHHHHHHHHSSSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------HHSCHHHHHHHHH
T ss_pred             chHHHHHHHHcCcccccceeeehHHHHHHHHHHHHHHHHHHHHH-----------------------hhhhHHHHHHHHH
Confidence            456789999999988  777888899999999999999999887                       5578999999977


Q ss_pred             HHHHHHHHHHhhc-cCCchh---HHhhhCChhHHHHHHHH---------------hccccccccccCCCCCC-------C
Q 045073           81 VPAALTYYWRMKM-PETARY---TALVEGNQKKAAVDMAK---------------VLDTDLTVATSAYPVPV-------S  134 (402)
Q Consensus        81 i~~~~~~~~~~~~-pesp~~---l~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~-------~  134 (402)
                      +..++.++...+. |+..+.   ....+.++++..+..+.               ....+.+  .++.....       .
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  261 (491)
T 4aps_A          184 IGMFIGLLVYYFGGKKTLDPHYLRPTDPLAPEEVKPLLVKVSLAVAGFIAIIVVMNLVGWNS--LPAYINLLTIVAIAIP  261 (491)
T ss_dssp             HHHHHHHHHHHHHHHTTCCSCCSCCSCCCSHHHHHHHHHHCCCCCHHHHHHHHHHHHHSSCC--TTHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCcccccccccCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHhccCcc--cccchhhhhHHHHHHH
Confidence            6666544443322 221100   00001111121111111               0000000  00000000       0


Q ss_pred             ---CCccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHH
Q 045073          135 ---PEASTYGLFSKEFVQKHGLHLLGTTSTWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVAL  210 (402)
Q Consensus       135 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (402)
                         ......+.......++.....+......+.....+.....+.|.+.++ .+.+....+.            ......
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~  329 (491)
T 4aps_A          262 VFYFAWMISSVKVTSTEHLRVVSYIPLFIAAVLFWAIEEQGSVVLATFAAERVDSSWFPVSW------------FQSLNP  329 (491)
T ss_dssp             HHHHHHHC------------CTTHHHHHHHHHHHHHHHGGGGTHHHHHHHHSCCCSSSCSGG------------GTTHHH
T ss_pred             HHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhccCccCHHH------------Hhccch
Confidence               000000000000011111112223323333333444455555666654 4444333232            445556


Q ss_pred             hhhhhhhhhHHHhhhccchhHHHH-----HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHH
Q 045073          211 FATVPGYWFTVFLIDRIGRFIIQL-----GGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTL  285 (402)
Q Consensus       211 ~~~~~g~~~~g~l~dr~grr~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (402)
                      +..+++..+.+++.||+|||+...     .+..+.+++++++...........             ........+..+..
T Consensus       330 ~~~~~~~~~~~~l~~r~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~l~  396 (491)
T 4aps_A          330 LFIMLYTPFFAWLWTAWKKNQPSSPTKFAVGLMFAGLSFLLMAIPGALYGTSG-------------KVSPLWLVGSWALV  396 (491)
T ss_dssp             HHHHHHHHHHHHHHHHTTTC---CHHHHHHHHHHHHHHHTTTHHHHHHCCCCT-------------TCCTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHhcCCCC-------------CccHHHHHHHHHHH
Confidence            667777788999999999986544     555555555554444322111000             11222333333333


Q ss_pred             HHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee-e
Q 045073          286 FFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV-P  364 (402)
Q Consensus       286 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~-~  364 (402)
                      +.+.....+..+.++.|.+|++.|+++.|+.+....+|.++++.+.+.+.+.   ++...|.+.+++++++.++.+++ +
T Consensus       397 g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  473 (491)
T 4aps_A          397 ILGEMLISPVGLSVTTKLAPKAFNSQMMSMWFLSSSVGSALNAQLVTLYNAK---SEVAYFSYFGLGSVVLGIVLVFLSK  473 (491)
T ss_dssp             HHHHHTTTTHHHHHHHHHTTTTCSSSSTHHHHHHHHHHHHHHHHHGGGGGGS---STTHHHHHTHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4444455667888999999999999999999999999999999998888765   66677777777777776665544 5


Q ss_pred             ccC
Q 045073          365 ETN  367 (402)
Q Consensus       365 et~  367 (402)
                      +.+
T Consensus       474 ~~~  476 (491)
T 4aps_A          474 RIQ  476 (491)
T ss_dssp             ---
T ss_pred             HHH
Confidence            443

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}

Probab=99.78  E-value=5e-19  Score=161.51  Aligned_cols=260  Identities=14%  Similarity=0.115  Sum_probs=167.3

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      +...+++.|++|+++|++++++.+.+..+|.++++.+++.+.                       +..+||+.|++.++.
T Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~-----------------------~~~~~~~~~~~~~~~  163 (375)
T 2gfp_A          107 VMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLD-----------------------TMWNWRACYLFLLVL  163 (375)
T ss_dssp             HHHHHHHHHHHHTSSCCSHHHHHHHHHHHHHHHHHHHHHHSS-----------------------CHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH-----------------------HhccHHHHHHHHHHH
Confidence            455788999999999999999999999999999999998875                       557899999987777


Q ss_pred             HHHHHH-HHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073           83 AALTYY-WRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST  161 (402)
Q Consensus        83 ~~~~~~-~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (402)
                      .++..+ ..+++||+|+.    +++++                         +..+..    ++..+++   .++...+.
T Consensus       164 ~~~~~~~~~~~~~~~~~~----~~~~~-------------------------~~~~~~----~~~~~~~---~~~~~~~~  207 (375)
T 2gfp_A          164 CAGVTFSMARWMPETRPV----DAPRT-------------------------RLLTSY----KTLFGNS---GFNCYLLM  207 (375)
T ss_dssp             HHHHHCCCCCSSCCCSTT----TCCCC-------------------------CTTTCS----THHHHHH---HHHHHHHH
T ss_pred             HHHHHHHHHHHCcccCCC----Ccccc-------------------------cHHHHH----HHHhcCc---chHHHHHH
Confidence            666554 45568887643    11100                         000111    1111112   33444444


Q ss_pred             HHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHH-
Q 045073          162 WFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLL-  239 (402)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~-  239 (402)
                      .+......+....+.|.++++ .|.++.+.+.            ......++.+++.++.+++.||++++.  ..+... 
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~------------~~~~~~~~~~~~~~~~~~l~~r~~~~~--~~~~~~~  273 (375)
T 2gfp_A          208 LIGGLAGIAAFEACSGVLMGAVLGLSSMTVSI------------LFILPIPAAFFGAWFAGRPNKRFSTLM--WQSVICC  273 (375)
T ss_dssp             HHHHHHHHHHHHHHCSCSSHHHHHHHHHHHHH------------HHHTHHHHHHHHHHHHHTTTTHHHHHH--HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHH
Confidence            455555666777788888876 7777665544            667777888889999999999998732  222222 


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHH
Q 045073          240 MSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAA  319 (402)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~  319 (402)
                      ...+...+.....  .                ..............+++.....+...++..|.+| +.|+++.|+.+..
T Consensus       274 ~~~~~~~~~~~~~--~----------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~  334 (375)
T 2gfp_A          274 LLAGLLMWIPDWF--G----------------VMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-FLAGTAGALVGGL  334 (375)
T ss_dssp             HHTSSSSSHHHHH--H----------------HHHHHHHHHHHHHHHHHHHHTSSTTHHHHHTHHH-HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhh--c----------------cccHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCC-cccchHHHHHHHH
Confidence            1111111111100  0                0111222222222233334455677888999999 8999999999999


Q ss_pred             HHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHh
Q 045073          320 GKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGF  357 (402)
Q Consensus       320 ~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  357 (402)
                      ..+|..++|.+.+.+.+..  ++...+.+ .++.+++.
T Consensus       335 ~~~g~~~~~~~~g~l~~~~--~~~~~~~~-~~~~~~~~  369 (375)
T 2gfp_A          335 QNIGSGVLASLSAMLPQTG--QGSLGLLM-TLMGLLIV  369 (375)
T ss_dssp             HHHHHHCCSTTCTHHHHHH--HHHHHHHH-HHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCC--cccHHHHH-HHHHHHHH
Confidence            9999999999999887754  55555554 33333333

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*

Probab=99.75  E-value=9.1e-19  Score=162.11  Aligned_cols=143  Identities=15%  Similarity=0.046  Sum_probs=97.6

Q ss_pred             HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073          205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT  284 (402)
Q Consensus       205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (402)
                      ...+..++.+++.++.++++||+|||+.+..+..+.++..+.+...                     .+.+.... ....
T Consensus       264 ~~~~~~~~~~~~~~~~g~l~dr~g~~~~l~~~~~~~~~~~~~~~~~---------------------~~~~~~~~-~~~l  321 (417)
T 2cfq_A          264 VTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFA---------------------TSALEVVI-LKTL  321 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTC---------------------CSHHHHHH-HTTH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHh---------------------ccHHHHHH-HHHH
Confidence            4556667777888899999999999999887776665554333221                     12222222 1111


Q ss_pred             HHHHhhCCccccccccccccccchhhhhhhHH-HHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheee-
Q 045073          285 LFFANFGPNSTTFIVPAELFPARLRSTCHGIS-AAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFM-  362 (402)
Q Consensus       285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~-~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~-  362 (402)
                      .........+..+.+++|.+|++.|+++.++. +....+|++++|.+.+.+.+..  ++...|.+.+++.+++.++.++ 
T Consensus       322 ~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~lg~~~gp~l~G~l~~~~--g~~~~f~~~~~~~l~~~~~~~~~  399 (417)
T 2cfq_A          322 HMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESI--GFQGAYLVLGLVALGFTLISVFT  399 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHTTTHHHHHHHHTHHHHTHHHHS--HHHHHHHHHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhHHHHHhhhhHHHHHHhc--CcHHHHHHHHHHHHHHHHHHHhh
Confidence            11111122234567889999999999999995 7788899999999999988866  7778888888888887766554 


Q ss_pred             eeccCCccc
Q 045073          363 VPETNGLSL  371 (402)
Q Consensus       363 ~~et~~~~~  371 (402)
                      .||+++.++
T Consensus       400 ~~~~~~~~~  408 (417)
T 2cfq_A          400 LSGPGPLSL  408 (417)
T ss_dssp             SCCSCTTCS
T ss_pred             hcCCCchHH
Confidence            466554443

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1

Probab=99.64  E-value=2.5e-15  Score=140.36  Aligned_cols=186  Identities=12%  Similarity=-0.012  Sum_probs=139.0

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccch
Q 045073          150 KHGLHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGR  229 (402)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~gr  229 (402)
                      ..++.+....+..+......+....+.|.+.+++ .+..+.+.            ......++..++.++.|+++||+||
T Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~g~------------~~~~~~~~~~~~~~~~G~l~dr~g~   91 (451)
T 1pw4_A           25 LRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQG-FSRGDLGF------------ALSGISIAYGFSKFIMGSVSDRSNP   91 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTSHHHHHHHTTSST-TCSSCHHH------------HHHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHhHHHH------------HHHHHHHHHHHHHHhHHHHHHhcCc
Confidence            3344566666666666666667777888888888 88777665            7777888889999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchh
Q 045073          230 FIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLR  309 (402)
Q Consensus       230 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r  309 (402)
                      |+++..+.++.+++.++.++.... .                .+.+.+++ ..+..+.+.....+...+++.|.+|++.|
T Consensus        92 r~~l~~~~~~~~~~~~~~~~~~~~-~----------------~~~~~l~~-~~~l~G~~~~~~~~~~~~~i~~~~~~~~r  153 (451)
T 1pw4_A           92 RVFLPAGLILAAAVMLFMGFVPWA-T----------------SSIAVMFV-LLFLCGWFQGMGWPPCGRTMVHWWSQKER  153 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCHHH-H----------------SSSSHHHH-HHHHHHHHHHHTHHHHHHHHHTTCTTTHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhc-c----------------ccHHHHHH-HHHHHHHHhhhccchHHHHHHHHCCchhh
Confidence            999999999888888777662110 0                22223333 33333443444566778899999999999


Q ss_pred             hhhhhHHHHHHHHhHHHHhHhHHhhhhccCCc-chhhHHHHHHHHHHHhhhee-eeeccCC
Q 045073          310 STCHGISAAAGKAGAIVGAFGVQYYTQKGDKQ-IKQSIITLAVVNFLGFLCSF-MVPETNG  368 (402)
Q Consensus       310 ~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~~-~~~et~~  368 (402)
                      +++.++.+....+|.+++|.+.+.+.+..  + |+..|++.+++.++..++.+ ++||++.
T Consensus       154 ~~~~~~~~~~~~~g~~~g~~~~~~l~~~~--g~w~~~f~~~~~~~~~~~~~~~~~~~~~~~  212 (451)
T 1pw4_A          154 GGIVSVWNCAHNVGGGIPPLLFLLGMAWF--NDWHAALYMPAFCAILVALFAFAMMRDTPQ  212 (451)
T ss_dssp             HHHHHHHHHHHHHHHTSHHHHHHHHHHHT--CCSTTCTHHHHHHHHHHHHHHHHHCCCSST
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhhccCCHh
Confidence            99999999999999999999998877766  7 99999998888777665544 4576543

>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}

Probab=99.63  E-value=3.8e-16  Score=148.91  Aligned_cols=82  Identities=7%  Similarity=-0.042  Sum_probs=55.0

Q ss_pred             hhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcc---------hhhHHHHHHHHHHHhhh
Q 045073          289 NFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQI---------KQSIITLAVVNFLGFLC  359 (402)
Q Consensus       289 ~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~i~~i~  359 (402)
                      .....+..+++..|..|++.|+++.|+.+....+|+.++|.+.+.+.+..+.+|         ...|++.+++.+++.++
T Consensus       419 ~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (524)
T 2xut_A          419 EVLVSATGLEFAYSQAPKAMKGTIMSFWTLSVTVGNLWVLLANVSVKSPTVTEQIVQTGMSVTAFQMFFFAGFAILAAIV  498 (524)
T ss_dssp             HHHHHHHHTTTHHHHCCTTCCTTTHHHHGGGHHHHHHHHHHHHHHTTSCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCcHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccHHHHHHHHHHHHHHH
Confidence            344456677889999999999999999999999999999999998876321011         23366777777776666


Q ss_pred             eeee-eccCCcc
Q 045073          360 SFMV-PETNGLS  370 (402)
Q Consensus       360 ~~~~-~et~~~~  370 (402)
                      .+++ +++++++
T Consensus       499 ~~~~~~~~~~~~  510 (524)
T 2xut_A          499 FALYARSYQMQD  510 (524)
T ss_dssp             HC----------
T ss_pred             HHHHHHHhccch
Confidence            5544 6555443

>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*

Probab=99.61  E-value=1.3e-14  Score=134.89  Aligned_cols=184  Identities=11%  Similarity=0.033  Sum_probs=135.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHH
Q 045073          153 LHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFII  232 (402)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~  232 (402)
                      +.++......+.............|.+.+++|.+..+.+.            ......++..++.++.|+++||+|||+.
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~------------~~~~~~~~~~i~~~~~G~l~dr~g~r~~   93 (438)
T 3o7q_A           26 IPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGL------------IQSAFYFGYFIIPIPAGILMKKLSYKAG   93 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSHHHHH------------HHHHHHHHHHTTHHHHHHHHHHSCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHhHHHHHHHhcchHH
Confidence            3455555566666666677777888888999999887666            7788888899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhh
Q 045073          233 QLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTC  312 (402)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~  312 (402)
                      +..+.++.+++.++......                   ......+.+..+..+.+.....+...++++|.+|++.|+.+
T Consensus        94 l~~~~~~~~~~~~~~~~~~~-------------------~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~  154 (438)
T 3o7q_A           94 IITGLFLYALGAALFWPAAE-------------------IMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFR  154 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH-------------------TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHH
T ss_pred             HHHHHHHHHHHHHHHHhccc-------------------cccHHHHHHHHHHHHhhHHHhhhhHHHHHHHHcCchhHHHH
Confidence            99999988888777633211                   22233344444444444445556778899999999999999


Q ss_pred             hhHHHHHHHHhHHHHhHhHHhhh-hccCCc------------------------chhhHHHHHHHHHHHhhheeee--ec
Q 045073          313 HGISAAAGKAGAIVGAFGVQYYT-QKGDKQ------------------------IKQSIITLAVVNFLGFLCSFMV--PE  365 (402)
Q Consensus       313 ~~~~~~~~~~g~~i~~~~~~~~~-~~~~~~------------------------~~~~~~~~~~~~~i~~i~~~~~--~e  365 (402)
                      .++.+....+|..+++.+.+.+. +..+ .                        |++.|++.+++.++..++.++.  ||
T Consensus       155 ~~~~~~~~~~g~~~g~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~p~  233 (438)
T 3o7q_A          155 LNLAQTFNSFGAIIAVVFGQSLILSNVP-HQSQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPA  233 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTHHHHTSSC-CCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccc-cccccccccCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence            99999999999999999998887 4431 2                        7888877776666555444433  55


Q ss_pred             cCC
Q 045073          366 TNG  368 (402)
Q Consensus       366 t~~  368 (402)
                      +++
T Consensus       234 ~~~  236 (438)
T 3o7q_A          234 LQS  236 (438)
T ss_dssp             CTT
T ss_pred             ccc
Confidence            443

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}

Probab=99.57  E-value=3e-14  Score=134.66  Aligned_cols=174  Identities=14%  Similarity=0.055  Sum_probs=130.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhh------cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhc-
Q 045073          154 HLLGTTSTWFLLDIAFYTINLAQKDIYPA------TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDR-  226 (402)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr-  226 (402)
                      .++......+.....++....+.+.++++      +|.+..+.+.            ......++..++.++.|+++|| 
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~   81 (491)
T 4aps_A           14 GLSTLFMTEMWERFSYYGMRAILLYYMWFLISTGDLHITRATAAS------------IMAIYASMVYLSGTIGGFVADRI   81 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCSCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHhcc
Confidence            45555566666667777777777777754      7888887665            7778888899999999999999 


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccccccccccc
Q 045073          227 IGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPA  306 (402)
Q Consensus       227 ~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~  306 (402)
                      +|||+++..+.++.+++.++....                     .+.+. +.+..+..+.+.....+...++++|.+|+
T Consensus        82 ~g~r~~~~~~~~~~~~~~~~~~~~---------------------~~~~~-~~~~~~l~g~~~~~~~~~~~~~~~~~~~~  139 (491)
T 4aps_A           82 IGARPAVFWGGVLIMLGHIVLALP---------------------FGASA-LFGSIILIIIGTGFLKPNVSTLVGTLYDE  139 (491)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHSC---------------------CSTTH-HHHHHHHHHHHHHHHHHHHHHHHHHHSSS
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHh---------------------hhHHH-HHHHHHHHHHHHHhccchHHHHHHHHcCc
Confidence            899999999988887777665542                     12222 23333333333444556778889999999


Q ss_pred             ch--hhhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073          307 RL--RSTCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV  363 (402)
Q Consensus       307 ~~--r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~  363 (402)
                      +.  |+.+.++.+....+|..++|.+.+.+.+..  +|+..|++.++..+++.++.++.
T Consensus       140 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~--g~~~~f~~~~~~~~~~~~~~~~~  196 (491)
T 4aps_A          140 HDRRRDAGFSIFVFGINLGAFIAPLIVGAAQEAA--GYHVAFSLAAIGMFIGLLVYYFG  196 (491)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccceeeehHHHHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHHHh
Confidence            88  777888888999999999999999998877  89999999887777766665543

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}

Probab=99.52  E-value=5.7e-14  Score=127.91  Aligned_cols=175  Identities=11%  Similarity=0.004  Sum_probs=132.8

Q ss_pred             HHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHH
Q 045073          159 TSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFL  238 (402)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~  238 (402)
                      ....+.............|.+.+++|.+..+.+.            ......++..++.++.|+++||+|||+.+..+..
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~------------~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~   73 (375)
T 2gfp_A            6 VLLVAVGQMAQTIYIPAIADMARDLNVREGAVQS------------VMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMS   73 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTSSSTTHHHHH------------HHHHHHHHHHHHHTTHHHHHTTSCCCCCCHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhhHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHH
Confidence            3344444455555566678888889998887665            7777888888999999999999999999999988


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHH
Q 045073          239 LMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAA  318 (402)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~  318 (402)
                      +.+++.++.....                      ......+.....+.+.....+...+++.|.+|++.|+++.++.+.
T Consensus        74 ~~~~~~~~~~~~~----------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (375)
T 2gfp_A           74 IFMLATLVAVTTS----------------------SLTVLIAASAMQGMGTGVGGVMARTLPRDLYERTQLRHANSLLNM  131 (375)
T ss_dssp             HHHHHHHHHHHHH----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCSHHHHHHH
T ss_pred             HHHHHHHHHHHhc----------------------cHHHHHHHHHHHHHHHHhhhhhHHHHHHHHCCHHHHHHHHHHHHH
Confidence            8888877766531                      223333333344443444556677888999999999999999999


Q ss_pred             HHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhhee-eeeccCCc
Q 045073          319 AGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSF-MVPETNGL  369 (402)
Q Consensus       319 ~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~~~et~~~  369 (402)
                      ...+|..++|.+.+.+.+..  +|+..+.+.+++.++..+..+ ++||++++
T Consensus       132 ~~~~g~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (375)
T 2gfp_A          132 GILVSPLLAPLIGGLLDTMW--NWRACYLFLLVLCAGVTFSMARWMPETRPV  181 (375)
T ss_dssp             HHHHHHHHHHHHHHHSSCHH--HHHHHHHHHHHHHHHHHCCCCCSSCCCSTT
T ss_pred             HHHHHHHhhHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHCcccCCC
Confidence            99999999999999988776  899999988888877766444 45776543

>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}

Probab=99.43  E-value=1.7e-12  Score=123.62  Aligned_cols=172  Identities=10%  Similarity=0.003  Sum_probs=127.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhh-hcC------cchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhcc-
Q 045073          156 LGTTSTWFLLDIAFYTINLAQKDIYP-ATG------IVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRI-  227 (402)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-  227 (402)
                      +...+..+.....+++...+++.++. ++|      ++..+.+.            ......++.+++.+++|+++||+ 
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~g~------------~~~~~~~~~~~~~~~~G~l~dr~~   82 (524)
T 2xut_A           15 PYIIASEACERFSFYGMRNILTPFLMTALLLSIPEELRGAVAKD------------VFHSFVIGVYFFPLLGGWIADRFF   82 (524)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCSSSTTTTTHHH------------HHHHHHHHHHHTHHHHHHHHTTSS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHh
Confidence            33444555555666777777777664 578      88776655            67777888889999999999999 


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccc
Q 045073          228 GRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPAR  307 (402)
Q Consensus       228 grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~  307 (402)
                      |||+.+..+.++.+++.++....                     ......+.+..+..+.+.....+...+++.|.+|++
T Consensus        83 g~r~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~  141 (524)
T 2xut_A           83 GKYNTILWLSLIYCVGHAFLAIF---------------------EHSVQGFYTGLFLIALGSGGIKPLVSSFMGDQFDQS  141 (524)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHT---------------------SSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHTCSTT
T ss_pred             cchHHHHHHHHHHHHHHHHHHHh---------------------cccHHHHHHHHHHHHHhccccchhHHHHHHHHcCcc
Confidence            99999999888887777666553                     202233333344444445556677888999999999


Q ss_pred             hhhhhhhH---HHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheee
Q 045073          308 LRSTCHGI---SAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFM  362 (402)
Q Consensus       308 ~r~~~~~~---~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~  362 (402)
                      .|+++.+.   .+....+|..++|.+.+.+.+..  +|+..|++.+++.+++.++.++
T Consensus       142 ~r~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~--g~~~~f~~~~~~~~~~~~~~~~  197 (524)
T 2xut_A          142 NKSLAQKAFDMFYFTINFGSFFASLSMPLLLKNF--GAAVAFGIPGVLMFVATVFFWL  197 (524)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHHTSTHHHHTS--CHHHHHHHHHHHHHHHHHHHHS
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--cHHHHHHHHHHHHHHHHHHHHH
Confidence            99876666   88889999999999999888766  8999999888877766655443

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=99.29  E-value=2e-11  Score=115.20  Aligned_cols=159  Identities=15%  Similarity=0.035  Sum_probs=106.3

Q ss_pred             HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073          205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT  284 (402)
Q Consensus       205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (402)
                      ..+...++.++|++++|+++||+|||+.++++.++..++.++.++..........    .......-......+++..+.
T Consensus        60 ~~s~~~~G~~iG~~~~G~laDr~GRk~~l~~~~~l~~i~~i~~a~~~~~~~~~~~----~~~~~~~~a~~~~~l~~~R~l  135 (491)
T 4gc0_A           60 CVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINP----DNTVPVYLAGYVPEFVIYRII  135 (491)
T ss_dssp             HHHTHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHCTTTTTSCSSS----SSSCCGGGGGCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc----hhHHHHHHhhhHHHHHHHHHH
Confidence            5666778899999999999999999999999998888887776643211000000    000000002233445555555


Q ss_pred             HHHHhhCCccccccccccccccchhhhhhhHHHHHHHHhHHHHhHhHHhhhhccCC------cchhhHHHHHHHHHHHhh
Q 045073          285 LFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKAGAIVGAFGVQYYTQKGDK------QIKQSIITLAVVNFLGFL  358 (402)
Q Consensus       285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~------~~~~~~~~~~~~~~i~~i  358 (402)
                      .+.+..+..+...++++|..|++.|+...++.+....+|..+++............      .|+..+.+..+..++..+
T Consensus       136 ~G~g~G~~~~~~~~~i~E~~p~~~rg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (491)
T 4gc0_A          136 GGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLM  215 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTTTTHHHHHHHTTHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhCCHHhhhhhHHhhhhhhhhhhhhhhhcchhhccccccccccchhhHHHhhhhhhhhhhhhh
Confidence            56555666677888999999999999999999988888888887666555433211      455566666666666666


Q ss_pred             heeeeeccC
Q 045073          359 CSFMVPETN  367 (402)
Q Consensus       359 ~~~~~~et~  367 (402)
                      ..+++||+.
T Consensus       216 ~~~~~peSp  224 (491)
T 4gc0_A          216 LLYTVPESP  224 (491)
T ss_dssp             HGGGSCCCH
T ss_pred             hhhcCCCCh
Confidence            666678873

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*

Probab=98.88  E-value=1.8e-10  Score=106.32  Aligned_cols=172  Identities=13%  Similarity=-0.043  Sum_probs=97.0

Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHH
Q 045073          158 TTSTWFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGG  236 (402)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~  236 (402)
                      .....+.....+.....+.|.++++ +|.++.+.+.            ......++..++.++.|+++||+|||++++.+
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~------------~~~~~~~~~~i~~~~~G~lsDr~Grr~~l~~~   79 (417)
T 2cfq_A           12 FGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGI------------IFAAISLFSLLFQPLFGLLSDKLGLRKYLLWI   79 (417)
T ss_dssp             HHHHHHHHHHHHHHHTTTHHHHHHTTTCCCTTTSHH------------HHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhcchHHHHHH
Confidence            3333344444455556677887754 7998887665            77777888999999999999999999999887


Q ss_pred             HHHHHHHHHHHHH-HhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCcccccccccccccc--chhhhhh
Q 045073          237 FLLMSICMAILGA-RYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPA--RLRSTCH  313 (402)
Q Consensus       237 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~--~~r~~~~  313 (402)
                      ..+.++....... .......               ........+.....+......    .....+..+.  +.|+.+.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~~~~~~  140 (417)
T 2cfq_A           80 ITGMLVMFAPFFIFIFGPLLQ---------------YNILVGSIVGGIYLGFCFNAG----APAVEAFIEKVSRRSNFEF  140 (417)
T ss_dssp             HHHTTSCHHHHHHHTHHHHHH---------------TTCCHHHHGGGSSTTHHHHTT----HHHHHHHHHHHHHHHTCCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHhhh----HHHHHHHHHHhhhhcccch
Confidence            6655432211110 0000000               000000000000000000111    1122233332  3456667


Q ss_pred             hHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073          314 GISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV  363 (402)
Q Consensus       314 ~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~  363 (402)
                      |.......+|..++|.+.+.+.+.   +|+..|++.++..++..+..++.
T Consensus       141 g~~~~~~~~g~~~~~~l~~~l~~~---~~~~~f~~~~~~~~~~~~~~~~~  187 (417)
T 2cfq_A          141 GRARMFGCVGWALGASIVGIMFTI---NNQFVFWLGSGCALILAVLLFFA  187 (417)
T ss_dssp             HHHSSSTTTHHHHHHHHHHHHHHH---CSHHHHTTTTTTTTTHHHHSCSS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh---chhHHHHHHHHHHHHHHHHHHHc
Confidence            777777788889999988888764   77888877666554444444444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	402
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	99.89
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	99.72
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	99.65
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	99.1

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=8.8e-23  Score=188.42  Aligned_cols=293  Identities=14%  Similarity=0.148  Sum_probs=184.3

Q ss_pred             CcchhhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCcccccccccccCCCCCchhHHHHHHhHHH
Q 045073            3 PLSAVIMSEYANKRTRGAFIAAVFAMQGMGILFAGVISLIFSGIFLHVYNAPAFNRNHVLSAQPQGDYLWRIVLMFGAVP   82 (402)
Q Consensus         3 ~~~~~~i~e~~~~~~Rg~~~~~~~~~~~lG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wr~~f~~~~i~   82 (402)
                      +...++++|++|+++|++++++.+.+..+|.++++.++..+..                      ...+||+.|++.+++
T Consensus       135 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~----------------------~~~~w~~~~~~~~~~  192 (447)
T d1pw4a_         135 PPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMA----------------------WFNDWHAALYMPAFC  192 (447)
T ss_dssp             HHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHH----------------------HTCCSTTCTHHHHHH
T ss_pred             hHHHHHHHHHHHhhcccccccccccccchhhhhhhhhhhhHhh----------------------hhhcccccchhhhhh
Confidence            4567899999999999999999999999999999998877652                      234799999886665


Q ss_pred             HHH-HHHHHhhccCCchhHHhhhCChhHHHHHHHHhccccccccccCCCCCCCCCccccccchhhhhhhhhHHHHHHHHH
Q 045073           83 AAL-TYYWRMKMPETARYTALVEGNQKKAAVDMAKVLDTDLTVATSAYPVPVSPEASTYGLFSKEFVQKHGLHLLGTTST  161 (402)
Q Consensus        83 ~~~-~~~~~~~~pesp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (402)
                      .++ .++...+++|+|+....  ...++..        .+   +.++..+..+++...++...+...++  +.++.....
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  257 (447)
T d1pw4a_         193 AILVALFAFAMMRDTPQSCGL--PPIEEYK--------ND---YPDDYNEKAEQELTAKQIFMQYVLPN--KLLWYIAIA  257 (447)
T ss_dssp             HHHHHHHHHHHCCCSSTTTCC--CSCTTTC--------CC----------------CCTHHHHHHTSSC--HHHHHHHHH
T ss_pred             HHHHHHHHHHhcccchhhccc--chhhhhh--------hh---cccchhhccccccchhhHHHHHHHcC--chHHHHHHH
Confidence            555 45555667887765211  1111100        00   00000000011111111111222221  345555555


Q ss_pred             HHHHHHHHHHHHhhhhhhhhh-cCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHH
Q 045073          162 WFLLDIAFYTINLAQKDIYPA-TGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLM  240 (402)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~  240 (402)
                      .+......+....+.|.++.+ .+.+..+.+.            ......+..+++.++.|++.||++|++.........
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  325 (447)
T d1pw4a_         258 NVFVYLLRYGILDWSPTYLKEVKHFALDKSSW------------AYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFM  325 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHH
T ss_pred             hhhhhhhhhcchhhhhhhcccccccccchhhh------------hhhcchhhhhhhhhhhhhhhhhccccccccccchhH
Confidence            566666777777888888765 6777766554            667778888899999999999999876554444333


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhhhhhhHHHHHH
Q 045073          241 SICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAG  320 (402)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~  320 (402)
                      .+..+.......  ..               ........+..+..++...+..+....+..|.+|++.|+++.|+.+.++
T Consensus       326 ~~~~~~~~~~~~--~~---------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~  388 (447)
T d1pw4a_         326 TLVTIATIVYWM--NP---------------AGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFG  388 (447)
T ss_dssp             HHHHHHHHHTTS--CC---------------TTCHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSCTTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHh--cc---------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence            332222222111  11               1122222333333333344445567788899999999999999999988


Q ss_pred             HHh-HHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073          321 KAG-AIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV  363 (402)
Q Consensus       321 ~~g-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~  363 (402)
                      +++ .+++|.+.+.+.+..  ++...+.+.+++.+++.++.+++
T Consensus       389 ~~~g~~~~~~~~g~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~  430 (447)
T d1pw4a_         389 YLGGSVAASAIVGYTVDFF--GWDGGFMVMIGGSILAVILLIVV  430 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHSS--CSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHh--ChHHHHHHHHHHHHHHHHHHHHH
Confidence            874 567889999999987  88888888888877777666544

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=99.72  E-value=1.7e-17  Score=150.32  Aligned_cols=142  Identities=14%  Similarity=0.023  Sum_probs=104.0

Q ss_pred             HHHHHHhhhhhhhhhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHH
Q 045073          205 MFLVALFATVPGYWFTVFLIDRIGRFIIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLT  284 (402)
Q Consensus       205 ~~~~~~~~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (402)
                      ......++..++..+.+++.||+|+|+.+..+..+.+++.+.+...                     .+.+... +..+.
T Consensus       264 ~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~-~~~~l  321 (417)
T d1pv7a_         264 VTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFA---------------------TSALEVV-ILKTL  321 (417)
T ss_dssp             HHHHHHHHHHHHHTTHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTC---------------------CCHHHHH-HHHHH
T ss_pred             cccccccccccchhhhhhhhcccccccchhhhHHHHHHhhhccccc---------------------cccchhh-HHHHH
Confidence            5666777888888899999999999999998887777766655442                     2222333 33333


Q ss_pred             HHHHhhCCccccccccccccccchhhhhhhHHH-HHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee
Q 045073          285 LFFANFGPNSTTFIVPAELFPARLRSTCHGISA-AAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV  363 (402)
Q Consensus       285 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~-~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~  363 (402)
                      .+.......+...++..|.+|++.|+++.++.. ....+|..++|.+.+.+.+..  |++.++++.+++.++..++.++.
T Consensus       322 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~G~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~  399 (417)
T d1pv7a_         322 HMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESI--GFQGAYLVLGLVALGFTLISVFT  399 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHHHHHh
Confidence            333333445677788999999999999999864 456789999999999999988  88889988888887776665544


Q ss_pred             -eccCCcc
Q 045073          364 -PETNGLS  370 (402)
Q Consensus       364 -~et~~~~  370 (402)
                       ++++..+
T Consensus       400 l~~~~~~~  407 (417)
T d1pv7a_         400 LSGPGPLS  407 (417)
T ss_dssp             SCCSSCTT
T ss_pred             hcCCCccc
Confidence             5444433

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=99.65  E-value=8.8e-16  Score=140.83  Aligned_cols=184  Identities=12%  Similarity=-0.003  Sum_probs=128.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchh
Q 045073          151 HGLHLLGTTSTWFLLDIAFYTINLAQKDIYPATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRF  230 (402)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr  230 (402)
                      +|..+...++.++.............|.+ ++.|++..+.+.            ..+...++..++.+++|+++||+|||
T Consensus        23 ~w~i~~~~~~~~~~~~~~~~~~~~~~p~~-~~~g~s~~~~g~------------~~s~~~~~~~~~~~~~G~l~Dr~g~r   89 (447)
T d1pw4a_          23 RWQIFLGIFFGYAAYYLVRKNFALAMPYL-VEQGFSRGDLGF------------ALSGISIAYGFSKFIMGSVSDRSNPR   89 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTSHHHHHHHT-TSSTTCSSCHHH------------HHHHHHHHHHHHHHHHHHHHHHSCHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCcCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHcCch
Confidence            33444444444444433333444455644 568999988776            77788888899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHHHHHHHHHHHHHhhCCccccccccccccccchhh
Q 045073          231 IIQLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWFMILYGLTLFFANFGPNSTTFIVPAELFPARLRS  310 (402)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~  310 (402)
                      +++..+.++.+++.++.+.......                  ......+..+..+.+.....+....++.|.+|++.|+
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~r~  151 (447)
T d1pw4a_          90 VFLPAGLILAAAVMLFMGFVPWATS------------------SIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERG  151 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCHHHHS------------------SSSHHHHHHHHHHHHHHHTHHHHHHHHHTTCTTTHHH
T ss_pred             HHHHHHHHHHHHHHhhccccchhhh------------------hHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhhccc
Confidence            9999999888888777665432111                  1123333333334434445567778899999999999


Q ss_pred             hhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHHHHhhheeee-ecc
Q 045073          311 TCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNFLGFLCSFMV-PET  366 (402)
Q Consensus       311 ~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~-~et  366 (402)
                      ++.++.+....+|..+++.+.+....... +|+..+++.+++.++..++.++. +++
T Consensus       152 ~~~~~~~~~~~~g~~i~~~~~~~~~~~~~-~w~~~~~~~~~~~~~~~~~~~~~~~~~  207 (447)
T d1pw4a_         152 GIVSVWNCAHNVGGGIPPLLFLLGMAWFN-DWHAALYMPAFCAILVALFAFAMMRDT  207 (447)
T ss_dssp             HHHHHHHHHHHHHHTSHHHHHHHHHHHTC-CSTTCTHHHHHHHHHHHHHHHHHCCCS
T ss_pred             ccccccccccchhhhhhhhhhhhHhhhhh-cccccchhhhhhHHHHHHHHHHhcccc
Confidence            99999999999999999988877666544 78888888887776665555543 443

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=99.10  E-value=3.4e-10  Score=101.25  Aligned_cols=180  Identities=11%  Similarity=-0.086  Sum_probs=103.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhh-hcCcchhhhhhhhHHHHHHHhHHHHHHHHhhhhhhhhhHHHhhhccchhHH
Q 045073          154 HLLGTTSTWFLLDIAFYTINLAQKDIYP-ATGIVRKAAAMDAIEEVFRISKAMFLVALFATVPGYWFTVFLIDRIGRFII  232 (402)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~grr~~  232 (402)
                      .++......+...........+.|.+++ +.|.+..+.+.            ......++..++.++.|+++||+|||+.
T Consensus         8 ~~~~l~~~~f~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~------------i~s~~~l~~~i~~~~~G~l~Dr~grr~~   75 (417)
T d1pv7a_           8 NFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGI------------IFAAISLFSLLFQPLFGLLSDKLGLRKY   75 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH------------HHHHHHHHHHHTHHHHHHHHHHHTTCTH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCchHH
Confidence            4444555555555555555667777665 48999988766            7788888899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCccccCCchHHH-HHHHHHHHHHHhhCCccccccccccccc--cchh
Q 045073          233 QLGGFLLMSICMAILGARYDSLRGKKCDPKKDPLHEYCDGNHAWF-MILYGLTLFFANFGPNSTTFIVPAELFP--ARLR  309 (402)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~e~~p--~~~r  309 (402)
                      ++.+..+..++..........                   ..... ........................+..+  .+.+
T Consensus        76 l~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (417)
T d1pv7a_          76 LLWIITGMLVMFAPFFIFIFG-------------------PLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRS  136 (417)
T ss_dssp             HHHHHHHHHHTHHHHHHHTHH-------------------HHHHTTCHHHHHHTTTTGGGGGTTHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhh-------------------hhHHHHHHHHHHHhhhcccccccchhhcccccccchhhhh
Confidence            998877777766665553210                   00000 0111111111111111111111112222  2344


Q ss_pred             hhhhhHHHHHHHHhHHHHhHhHHhhhhccCCcchhhHHHHHHHHH-HHhhheeeeeccC
Q 045073          310 STCHGISAAAGKAGAIVGAFGVQYYTQKGDKQIKQSIITLAVVNF-LGFLCSFMVPETN  367 (402)
Q Consensus       310 ~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~i~~~~~~et~  367 (402)
                      ....+........+..+++.+.+.+.+.   +++..+........ +..+..+..++++
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (417)
T d1pv7a_         137 NFEFGRARMFGCVGWALGASIVGIMFTI---NNQFVFWLGSGCALILAVLLFFAKTDAP  192 (417)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHSSCCCSC
T ss_pred             HHHHHHHhhhhccccccccccccccccc---cccccccchhhHHHHHHHHHHHHhcccc
Confidence            5566677777778888899888888776   44444444444444 3344444445443