Citrus Sinensis ID: 045091

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310--
Protein Sequence
MEGFQENNQPFAFNDGADIRSSLSQLILTGGTNTIDSIFSRCTPTSTMSSPAFEPLGSSVYLRQRDLLQKFSEENKTTNTTLARNYLTNIPLQNCAYTSSSTCIAPPKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDSAEAAAYAYDRAAYKLRGEYARLNFPNLKDPSKLGFGDCSKLNALKSAVDAKIQAICQKVKRERAKKSAKRSCILSDGGSKVASETESDKVEKVVDSCSSSSTMSPLIFGDGDLVSPTVSEDGFWKGENSQTSVSTEHPMMTTVESDFEGCSLARLPSYDPELIWEVLAN
Secondary Structure (PSIPRED)
ccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccEEccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccc
Secondary Structure Prediction (SSPRO)
ccHHHcccccccccccccccHHHHHHHHccccccHHHHHHccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccEEEEEEEcccccEEEEEEcccccEEEEEcccccHHHHHHHHHHHHHHHHcccEEEccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHccHHHHcc
Coil and Loop (DISEMBL)
megfqennqpfafndgadIRSSLSQLILtggtntidsifsrctptstmsspafeplgssvYLRQRDLLQKFSEENKTTNTTLARNYltniplqncaytssstciappkkklyrgvrqrhwgkwvaeirlpqnrmrvWLGTYDSAEAAAYAYDRAAYKLRGEyarlnfpnlkdpsklgfgdcskLNALKSAVDAKIQAICQKVKRERAkksakrscilsdggskvasetesdkVEKVVdscsssstmsplifgdgdlvsptvsedgfwkgensqtsvstehpmmttvesdfegcslarlpsydpeLIWEVLAN
Flexible Loop (DISEMBL)
MEGFQENNQPFAFNDGADIRSSLSQLILTGGTNTIDSIFSRCTPTSTMSSPAFEPLGSSVYLRQRDLLQKFSeenkttnttlarnyLTNIPLqncaytssstciappkkklyrgvrqrhwgkwvaeirlpqnrmRVWLGTYDSAEAAAYAYDRAAYKLRGEYARLNFPNLKDPSKLGFGDCSKLNALKSAVDAKIQAICQKVkrerakksakrscilsdggskvasetesdkvekvvdscsssstmsplifgdgDLVSPTVSEDGFWKGensqtsvstehpmMTTVESDFEGCSLarlpsydpeLIWEVLAN
Low Complexity Region (SEG)
MEGFQENNQPFAFNDGADIRSSLSQLILTGGTNTIDSIFSRCTPTSTMSSPAFEPLGSSVYLRQRDLLQKFSEENKTTNTTLARNYLTNIPLQNCAYTSSSTCIAPPKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTydsaeaaayaydraayKLRGEYARLNFPNLKDPSKLGFGDCSKLNALKSAVDAKIQAICQkvkrerakksakrsCILSDGGSKVASETEsdkvekvvdscssssTMSPLIFGDGDLVSPTVSEDGFWKGENSQTSVSTEHPMMTTVESDFEGCSLARLPSYDPELIWEVLAN
Disordered region (IsUnstruct)
*********************SLSQLILTGGTNTIDSIFSRCT****************VYLRQRDLLQ********TNTTLARNYLTNIPLQNCAYTSSSTCIAPPKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDSAEAAAYAYDRAAYKLRGEYARLNFPNLKDPSKLGFGDCSKLNALKSAVDAKIQAICQK*************************************************F**************************************FEGCSLARLPSYDPELIWEVL**
Disordered Region (DISOPRED)
**************************ILTG**NT********************************************************************************VRQRHWGKWVAEIRLPQNRMRVWLGTYDSAEAAAYAYDRAAYKLRGEYARLNFPN*********************************************************************************************************************ESDFEGCSLARLPSYDPELIWEVLAN
Disordered Region (DISEMBL)
MEGFQENNQPFAFNDGADIRSSLSQLILTGGTNTIDSIFSRCTPTSTMSSPAFEPLGSSVYLRQRDLLQKFSEENKTTNTTLARNYLTNIPLQNCAYTSSSTCIAPPKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDSAEAAAYAYDRAAYKLRGEYARLNFPNLKDPSKLGFGDCSKLNALKSAVDAKIQAICQK*******************************************TMSPLIFGDGDLVSPTVSEDGFWKGENSQTSVSTEHPMMTTVESDFEGCSLARLPSYDPELIWEVLAN
Disordered Region (DISPRO)
************FNDGADIRSSLSQLILTGGTNTIDSIFSRCTPTSTMSSPAFEPLGSSVYLRQRDLLQKFSEE*********************************KKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDSAEAAAYAYDRAAYKLRGEYARLNFPNLKDPS*****DCSKLNALKSAVDAKIQAICQKVKRE**************************************************************************************GCSLARLPSYDPELIWEVLAN
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEGFQENNQPFAFNDGADIRSSLSQLILTGGTNTIDSIFSRCTPTSTMSSPAFEPLGSSVYLRQRDLLQKFSEENKTTNTTLARNYLTNIPLQNCAYTSSSTCIAPPKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDSAEAAAYAYDRAAYKLRGEYARLNFPNLKDPSKLGFGDCSKLNALKSAVDAKIQAICQKVKRERAKKSAKRSCILSDGGSKVASETESDKVEKVVDSCSSSSTMSPLIFGDGDLVSPTVSEDGFWKGENSQTSVSTEHPMMTTVESDFEGCSLARLPSYDPELIWEVLAN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	312	2.2.26 [Sep-21-2011]
Q9C7W2	335	Ethylene-responsive trans	yes	no	0.955	0.889	0.495	1e-61
Q8H1E4	334	Ethylene-responsive trans	no	no	0.461	0.431	0.503	3e-35
O65665	272	Ethylene-responsive trans	no	no	0.301	0.345	0.659	4e-33
Q9LM15	261	Ethylene-responsive trans	no	no	0.294	0.352	0.61	3e-31
Q9SIE4	261	Ethylene-responsive trans	no	no	0.397	0.475	0.468	1e-30
Q9SKW5	314	Ethylene-responsive trans	no	no	0.346	0.343	0.577	2e-30
Q9SVQ0	388	Ethylene-responsive trans	no	no	0.493	0.396	0.386	2e-28
Q9FJQ2	277	Ethylene-responsive trans	no	no	0.371	0.418	0.476	1e-24
Q9SKT1	336	Ethylene-responsive trans	no	no	0.195	0.181	0.803	2e-24
Q9M0J3	292	Ethylene-responsive trans	no	no	0.189	0.202	0.745	7e-21

>sp|Q9C7W2|ERF61_ARATH Ethylene-responsive transcription factor ERF061 OS=Arabidopsis thaliana GN=ERF061 PE=2 SV=1

 Score =  237 bits (604), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 168/339 (49%), Positives = 211/339 (62%), Gaps = 41/339 (12%)

Query: 4   FQENNQPFAFNDGADIRSSLSQLILTGGTNTIDSIFSRCTPTS---------TMSSPAFE 54
           FQ N  P      ++IR+SLSQ+IL GG NT+DSIFS  TP+S         T + P   
Sbjct: 8   FQNNFSP----KISEIRASLSQIILAGGPNTLDSIFSLLTPSSVESATTSFNTHNPPPPP 63

Query: 55  PLGSSVYLRQRDLLQKFSEENKTTNT--------TLARNYLTNIPLQNCAYTSSSTCI-- 104
            LGSSVYLRQRD+++KF  +N+  +T        T   +  + + LQ  A + ++     
Sbjct: 64  QLGSSVYLRQRDIIEKFHLQNRAISTPHPPLFSSTYDHHQTSELMLQAAAGSPAAAFAAA 123

Query: 105 -----APPKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDSAEAAAYAYDRAAYKLR 159
                   KKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYD+AEAAAYAYDRAAYKLR
Sbjct: 124 LAAGRVTKKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDTAEAAAYAYDRAAYKLR 183

Query: 160 GEYARLNFPNLKDPSK-LGFGDCSKLNALKSAVDAKIQAICQKVKRERAKKSAKRSCILS 218
           GEYARLNFPNLKDPS+ LG GD SKL ALK+AVD KIQ+ICQ+V++ERAKKS K S    
Sbjct: 184 GEYARLNFPNLKDPSELLGLGDSSKLIALKNAVDGKIQSICQRVRKERAKKSVKVS---- 239

Query: 219 DGGSKVASETESDKVEKVVDSCSSSSTMSPLIFGDGDLVSPT-----VSEDGFWKGENSQ 273
              S   +++      +++ S   ++T + +   D   VSP       +         S+
Sbjct: 240 -KNSSATADSSCLSSPEILSSSPVTTTTTAVTSEDSYWVSPMGLCNSENSSPVSVSVPSE 298

Query: 274 TSVSTEHPMMTTVESDFEGCSLARLPSYDPELIWEVLAN 312
              + E   M  V++D  G  LAR+PS+DPELIWEVLAN
Sbjct: 299 VPATAEEEAMMGVDTD--GFLLARMPSFDPELIWEVLAN 335

Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8H1E4|RAP24_ARATH Ethylene-responsive transcription factor RAP2-4 OS=Arabidopsis thaliana GN=RAP2-4 PE=1 SV=1

 Score =  149 bits (376), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 79/157 (50%), Positives = 104/157 (66%), Gaps = 13/157 (8%)

Query: 110 KLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDSAEAAAYAYDRAAYKLRGEYARLNFPN 169
           KLYRGVRQRHWGKWVAEIRLP+NR R+WLGT+D+AE AA AYD+AAYKLRG++ARLNFPN
Sbjct: 150 KLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPN 209

Query: 170 LKDPSKLGFGDCSKLNALKSAVDAKIQAICQKV----KRERAKKSAK---RSCILSDGGS 222
           L+       GD  +   L S+VDAK++AIC+ +    K++++ KS+K   +     D   
Sbjct: 210 LRHNGSHIGGDFGEYKPLHSSVDAKLEAICKSMAETQKQDKSTKSSKKREKKVSSPDLSE 269

Query: 223 KVASETE------SDKVEKVVDSCSSSSTMSPLIFGD 253
           KV +E        S  V +  +S + SS +S L F D
Sbjct: 270 KVKAEENSVSIGGSPPVTEFEESTAGSSPLSDLTFAD 306

Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways.

Arabidopsis thaliana (taxid: 3702)

>sp|O65665|ERF60_ARATH Ethylene-responsive transcription factor ERF060 OS=Arabidopsis thaliana GN=ERF060 PE=2 SV=1

 Score =  142 bits (357), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 64/97 (65%), Positives = 77/97 (79%), Gaps = 3/97 (3%)

Query: 109 KKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDSAEAAAYAYDRAAYKLRGEYARLNFP 168
           +KLYRGVRQRHWGKWVAEIRLP+NR R+WLGT+D+AE AA AYD AAYKLRGE+ARLNFP
Sbjct: 90  QKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAAMAYDLAAYKLRGEFARLNFP 149

Query: 169 NLK-DPSKLGFGDCSKLNALKSAVDAKIQAICQKVKR 204
             + +    G G C   N L S+VDAK+Q ICQ +++
Sbjct: 150 QFRHEDGYYGGGSC--FNPLHSSVDAKLQEICQSLRK 184

Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LM15|RA213_ARATH Ethylene-responsive transcription factor RAP2-13 OS=Arabidopsis thaliana GN=RAP2-13 PE=1 SV=1

 Score =  135 bits (340), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 61/100 (61%), Positives = 77/100 (77%), Gaps = 8/100 (8%)

Query: 110 KLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDSAEAAAYAYDRAAYKLRGEYARLNFPN 169
           KLYRGVRQRHWGKWVAEIRLP+NR R+WLGT+D+AE AA AYD+AAYKLRG++ARLNFP+
Sbjct: 81  KLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPD 140

Query: 170 LKDPSKLGFGDCSKLNALKSAVDAKIQAICQKVKRERAKK 209
           L+           +   L+S+VDAK++AICQ +     K+
Sbjct: 141 LR--------HNDEYQPLQSSVDAKLEAICQNLAETTQKQ 172

Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SIE4|ERF56_ARATH Ethylene-responsive transcription factor ERF056 OS=Arabidopsis thaliana GN=ERF056 PE=2 SV=1

 Score =  134 bits (336), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 68/145 (46%), Positives = 94/145 (64%), Gaps = 21/145 (14%)

Query: 90  IPLQNCAYTSSSTCIAPPKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDSAEAAAY 149
           I ++N   ++S T      K LYRGVRQRHWGKWVAEIRLP+NR R+WLGT+++AE AA 
Sbjct: 55  IRMKNLTPSTSKT------KNLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFETAEKAAL 108

Query: 150 AYDRAAYKLRGEYARLNFPNLKDPSKLGFGDCSKLNALKSAVDAKIQAICQKVKRERAKK 209
           AYD+AA++LRG+ A+LNFPNL             +N L S+VD K+QAIC+ +++     
Sbjct: 109 AYDQAAFQLRGDIAKLNFPNLIH---------EDMNPLPSSVDTKLQAICKSLRK----- 154

Query: 210 SAKRSCILSDGGSKVASETESDKVE 234
             +  C +SD   + +  + SDK E
Sbjct: 155 -TEEICSVSDQTKEYSVYSVSDKTE 178

Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SKW5|ERF55_ARATH Ethylene-responsive transcription factor ERF055 OS=Arabidopsis thaliana GN=ERF055 PE=2 SV=1

 Score =  132 bits (333), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 63/109 (57%), Positives = 81/109 (74%), Gaps = 1/109 (0%)

Query: 100 SSTCIAPPKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDSAEAAAYAYDRAAYKLR 159
           SS  ++ P K LYRGVRQRHWGKWVAEIRLP+NR R+WLGT+D+AE AA AYDRAA+KLR
Sbjct: 132 SSGSVSKPAK-LYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDRAAFKLR 190

Query: 160 GEYARLNFPNLKDPSKLGFGDCSKLNALKSAVDAKIQAICQKVKRERAK 208
           G+ ARLNFP L+  +     D  +   +++AVDAK++AI  + K +  K
Sbjct: 191 GDSARLNFPALRYQTGSSPSDTGEYGPIQAAVDAKLEAILAEPKNQPGK 239

Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SVQ0|ERF62_ARATH Ethylene-responsive transcription factor ERF062 OS=Arabidopsis thaliana GN=ERF062 PE=2 SV=1

 Score =  126 bits (316), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/202 (38%), Positives = 99/202 (49%), Gaps = 48/202 (23%)

Query: 110 KLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDSAEAAAYAYDRAAYKLRGEYARLNFPN 169
           KLYRGVRQRHWGKWVAEIRLP+NR RVWLGT+++AE AA AYD AAY LRGE+A LNFP+
Sbjct: 230 KLYRGVRQRHWGKWVAEIRLPRNRTRVWLGTFETAEQAAMAYDTAAYILRGEFAHLNFPD 289

Query: 170 LKDPSKLGFGDCSKLNALKSAVDAKIQAICQKVKRERAKKSAKRSCILSDGGSKVASETE 229
           LK   K G   C     + S +++KIQ I                        KV +  +
Sbjct: 290 LKHQLKSGSLRC----MIASLLESKIQQISSSQVSNSPSPPP----------PKVGTPEQ 335

Query: 230 SDKVEKVVDSCSSSSTMSPLIFGDGDLVSPTVSEDGFWKGENSQTSVSTEHPMMTTVESD 289
            +   K+                          ED   K + S   V         +E D
Sbjct: 336 KNHHMKMES-----------------------GEDVMMKKQKSHKEV---------MEGD 363

Query: 290 FEGCSLARLPSYDPELIWEVLA 311
             G  L+R+PS D +LIW+ L+
Sbjct: 364 --GVQLSRMPSLDMDLIWDALS 383

Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FJQ2|ERF57_ARATH Ethylene-responsive transcription factor ERF057 OS=Arabidopsis thaliana GN=ERF057 PE=2 SV=1

 Score =  114 bits (284), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/126 (47%), Positives = 86/126 (68%), Gaps = 10/126 (7%)

Query: 110 KLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDSAEAAAYAYDRAAYKLRGEYARLNFPN 169
           KLYRGVRQR WGKWVAEIRLP+NR R+WLGT+++A+ AA AYD+AA+K+RG+ ARLNFP+
Sbjct: 109 KLYRGVRQRQWGKWVAEIRLPKNRTRLWLGTFETAQEAALAYDQAAHKIRGDNARLNFPD 168

Query: 170 LKDPSKLGFGDCSKLNALKSAVDAKIQAICQK--VKRERAKKSAKRSCILSDGGSKVASE 227
           +     +  G   ++  L  +++AKI++IC    +   + +K  K   +LS G SK   E
Sbjct: 169 I-----VRQGHYKQI--LSPSINAKIESICNSSDLPLPQIEKQNKTEEVLS-GFSKPEKE 220

Query: 228 TESDKV 233
            E  ++
Sbjct: 221 PEFGEI 226

Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SKT1|ERF53_ARATH Ethylene-responsive transcription factor ERF053 OS=Arabidopsis thaliana GN=ERF053 PE=2 SV=1

 Score =  113 bits (282), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 49/61 (80%), Positives = 54/61 (88%)

Query: 110 KLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDSAEAAAYAYDRAAYKLRGEYARLNFPN 169
           KLYRGVRQRHWGKWVAEIR P+NR R+WLGT+D+AE AA AYDR A+KLRGE ARLNFP 
Sbjct: 185 KLYRGVRQRHWGKWVAEIRKPRNRTRLWLGTFDTAEEAAMAYDREAFKLRGETARLNFPE 244

Query: 170 L 170
           L
Sbjct: 245 L 245

Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M0J3|ERF54_ARATH Ethylene-responsive transcription factor ERF054 OS=Arabidopsis thaliana GN=ERF054 PE=2 SV=1

 Score =  101 bits (252), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 44/59 (74%), Positives = 50/59 (84%)

Query: 110 KLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDSAEAAAYAYDRAAYKLRGEYARLNFP 168
           KLYRGVRQR WGKWVAEIR P++R R+WLGT+D+AE AA AYDR A+KLRG  A LNFP
Sbjct: 141 KLYRGVRQRQWGKWVAEIRKPRSRARLWLGTFDTAEEAAMAYDRQAFKLRGHSATLNFP 199

Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	312
224075092	311	AP2/ERF domain-containing transcription	0.977	0.980	0.698	2e-96
255537769	315	DNA binding protein, putative [Ricinus c	0.955	0.946	0.626	8e-93
359474087	318	PREDICTED: ethylene-responsive transcrip	0.974	0.955	0.628	5e-90
224053787	272	AP2/ERF domain-containing transcription	0.868	0.996	0.632	2e-83
356495715	314	PREDICTED: ethylene-responsive transcrip	0.929	0.923	0.596	5e-82
388499454	320	unknown [Medicago truncatula]	0.919	0.896	0.608	6e-77
357481437	320	Ethylene-responsive transcription factor	0.923	0.9	0.610	1e-72
356539368	325	PREDICTED: ethylene-responsive transcrip	0.948	0.910	0.548	1e-71
297742325	264	unnamed protein product [Vitis vinifera]	0.657	0.776	0.718	1e-68
212717204	329	AP2 domain-containing transcription fact	0.932	0.884	0.538	1e-67

>gi|224075092|ref|XP_002304554.1| AP2/ERF domain-containing transcription factor [Populus trichocarpa] gi|222841986|gb|EEE79533.1| AP2/ERF domain-containing transcription factor [Populus trichocarpa]

 Score =  358 bits (919), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 222/318 (69%), Positives = 250/318 (78%), Gaps = 13/318 (4%)

Query: 1   MEGFQENNQPFAFNDGADIRSSLSQLILTGGTNTIDSIFSRCTPTSTMSSPAFEPLGSSV 60
           ME  QENN  FAFN  ADI SSLSQLIL GGTNT+DSIFS C P  +++SPAFEPLGSSV
Sbjct: 1   MERMQENNSSFAFNT-ADIGSSLSQLILAGGTNTLDSIFSHCQPARSLTSPAFEPLGSSV 59

Query: 61  YLRQRDLLQKFSEENKTTNTTLARNYLTNIPLQNCAYTSSSTCIAPPKKKLYRGVRQRHW 120
           YLRQRDLLQKFSEEN+  NT+L+ N  TN PLQN  +  SS  +AP KKKLYRGVRQRHW
Sbjct: 60  YLRQRDLLQKFSEENRI-NTSLSHNLQTN-PLQNPVH--SSNYLAPTKKKLYRGVRQRHW 115

Query: 121 GKWVAEIRLPQNRMRVWLGTYDSAEAAAYAYDRAAYKLRGEYARLNFPNLKDPSKLGFGD 180
           GKWVAEIRLPQNRMRVWLGTYD+AEAAAYAYDRAAYKLR +YARLNFPNLKDP+KLGF D
Sbjct: 116 GKWVAEIRLPQNRMRVWLGTYDTAEAAAYAYDRAAYKLRSQYARLNFPNLKDPAKLGFTD 175

Query: 181 CSKLNALKSAVDAKIQAICQKVKRERAKK-SAKRSCILSDG---GSKVASETESDKVEKV 236
           CSKLNALK+ VDAKIQAI QKVK+ERAKK +AK+S +  DG   GSK   + +S+     
Sbjct: 176 CSKLNALKNTVDAKIQAIFQKVKKERAKKNAAKKSNV--DGKSTGSKKPVKVDSNASTPS 233

Query: 237 VDSCSSSSTMSPLI-FGDGDLVSPTVSEDGFWKGE-NSQTSVSTEHPMMTTVESDFEGCS 294
             S SS ST+     +G  +LVSP VSEDGFWK E +S  SVST+ P+M     +FE CS
Sbjct: 234 PASSSSFSTLFSGDNWGGSELVSPAVSEDGFWKCESSSSPSVSTDCPVMVPQAMEFEDCS 293

Query: 295 LARLPSYDPELIWEVLAN 312
           LAR+PSYDPELIWEVLAN
Sbjct: 294 LARMPSYDPELIWEVLAN 311

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255537769|ref|XP_002509951.1| DNA binding protein, putative [Ricinus communis] gi|223549850|gb|EEF51338.1| DNA binding protein, putative [Ricinus communis]

 Score =  346 bits (887), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 205/327 (62%), Positives = 239/327 (73%), Gaps = 29/327 (8%)

Query: 1   MEGFQENNQPFAFNDGADIRSSLSQLILTGG-TNTIDSIFSRCTPTSTMSSPAFEPLGSS 59
           ME  Q NN  F F    +I SSLSQLIL GG +NT+DSIFS C+  ST++ P FEPLGSS
Sbjct: 1   MESMQANNATFGF---TNIGSSLSQLILAGGNSNTLDSIFSHCSSESTIACPVFEPLGSS 57

Query: 60  VYLRQRDLLQKFSEENKTTNTTLARNY-----LTNIPLQNCAYTSSSTCIAPPKKKLYRG 114
           VYLRQRDLLQKFSEEN+ T+T  + N      L   PL+N   TS+   +AP KKKLYRG
Sbjct: 58  VYLRQRDLLQKFSEENRATSTITSSNSYFSSNLPTTPLENSIRTSNY--LAPSKKKLYRG 115

Query: 115 VRQRHWGKWVAEIRLPQNRMRVWLGTYDSAEAAAYAYDRAAYKLRGEYARLNFPNLKDPS 174
           VRQRHWGKWVAEIRLPQNRMRVWLGTYD+AEAAAYAYDRAAYKLRGEYARLNFPNLKDPS
Sbjct: 116 VRQRHWGKWVAEIRLPQNRMRVWLGTYDTAEAAAYAYDRAAYKLRGEYARLNFPNLKDPS 175

Query: 175 KLGFGDCSKLNALKSAVDAKIQAICQKVKRERAKKSAKRSCILSDGGSKVASETESDKVE 234
           KLG  DC++LNALK++VDAKIQAICQKV+RERAK++A +   L+  G   ASE +  KV+
Sbjct: 176 KLGLIDCNRLNALKTSVDAKIQAICQKVRRERAKRTAAKKSNLNGNG--CASENKGVKVD 233

Query: 235 KVVDSCSSSSTMSPLIFGD----------GDLVSPTVSEDGFWKGENSQTSVSTEHPMMT 284
                 SSS ++ P                +LVSPT+SEDGFWK ENS  SVST+  ++ 
Sbjct: 234 ------SSSPSLFPSASASQSSSSLSPTVSELVSPTISEDGFWKCENSPPSVSTDCSILV 287

Query: 285 TVESDFEGCSLARLPSYDPELIWEVLA 311
               +FE CSLAR+PS+DPELIW VLA
Sbjct: 288 PQVMEFEDCSLARMPSFDPELIWAVLA 314

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359474087|ref|XP_002270561.2| PREDICTED: ethylene-responsive transcription factor ERF061-like [Vitis vinifera]

 Score =  337 bits (863), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 205/326 (62%), Positives = 243/326 (74%), Gaps = 22/326 (6%)

Query: 1   MEGFQENNQPFAFNDGADIRSSLSQLILTGGTNTIDSIFSRCTPTSTMSSPAFEPLGSSV 60
           ME  QENN  F+F  G DIRSSLSQL+LT G+NT+DSIFS C P++++++P  EPLGSSV
Sbjct: 1   MEKMQENNLQFSFQHGVDIRSSLSQLLLTSGSNTLDSIFSHCPPSTSVTNPVLEPLGSSV 60

Query: 61  YLRQRDLLQKFSEENKTTNTTLARNYLTNIPLQNCAYTSSSTCIAPPKKKLYRGVRQRHW 120
           YLRQRDLLQKFSEE++ +   +  N LT       +    S  + P KKKLYRGVRQRHW
Sbjct: 61  YLRQRDLLQKFSEESRASGR-ITSNSLT-------SSLHHSQFLNPCKKKLYRGVRQRHW 112

Query: 121 GKWVAEIRLPQNRMRVWLGTYDSAEAAAYAYDRAAYKLRGEYARLNFPNLKDPSKLGFGD 180
           GKWVAEIRLPQNRMRVWLGT+D+AEAAAYAYDRAAYKLRGEYARLNFPNL+D SKLGFGD
Sbjct: 113 GKWVAEIRLPQNRMRVWLGTFDTAEAAAYAYDRAAYKLRGEYARLNFPNLRDASKLGFGD 172

Query: 181 CSKLNALKSAVDAKIQAICQKVKRERAKKSAKR----SCILSDGGSKVASETESDKVEKV 236
           C++LNALKS+VDAKIQAICQKVKRERA K+ KR    +     GG         +K  KV
Sbjct: 173 CARLNALKSSVDAKIQAICQKVKRERAHKTTKRKSTSTGGEGGGGESTGGGGGGEKAVKV 232

Query: 237 -VDSCSSSSTMSPLIFGD-----GDLVSPTVSEDGFWKGENSQTSVSTEHPMMTTV---- 286
                SSS T SPL+ GD      +++SP+VSED FWKG+NS+ S+S + PM+       
Sbjct: 233 DSSPSSSSITASPLVGGDTHSWGSEMLSPSVSEDEFWKGDNSRASLSADGPMLVGALGAG 292

Query: 287 ESDFEGCSLARLPSYDPELIWEVLAN 312
           E++ EGC+LARLPSYDPELIWEVLAN
Sbjct: 293 ETESEGCALARLPSYDPELIWEVLAN 318

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224053787|ref|XP_002297979.1| AP2/ERF domain-containing transcription factor [Populus trichocarpa] gi|222845237|gb|EEE82784.1| AP2/ERF domain-containing transcription factor [Populus trichocarpa]

 Score =  315 bits (806), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 196/310 (63%), Positives = 224/310 (72%), Gaps = 39/310 (12%)

Query: 4   FQENNQPFAFNDGADIRSSLSQLILTGGTNTIDSIFSRCTPTSTMSSPAFEPLGSSVYLR 63
            QENN  FAFN+  DI SSLSQLIL GGTNT+DSIFS C   ST++SPAFEPLGSSVYLR
Sbjct: 1   MQENNFSFAFNNTTDIGSSLSQLILAGGTNTLDSIFSYCQAASTLTSPAFEPLGSSVYLR 60

Query: 64  QRDLLQKFSEENKTTNTTLARNYLTNIPLQNCAYTSSSTCIAPPKKKLYRGVRQRHWGKW 123
           QRDLLQKFSEEN+T NT+ + N+LTN PLQN  +TS+   +AP KKKLYRGVRQRHWGKW
Sbjct: 61  QRDLLQKFSEENRT-NTSFSHNWLTN-PLQNPGHTSN--YLAPIKKKLYRGVRQRHWGKW 116

Query: 124 VAEIRLPQNRMRVWLGTYDSAEAAAYAYDRAAYKLRGEYARLNFPNLKDPSKLGFGDCSK 183
           VAEIRLPQNRMRVWLGTYD+AEAAAYAYDRAAYKLRGEYARLNFPNLKDP++LGF DC++
Sbjct: 117 VAEIRLPQNRMRVWLGTYDTAEAAAYAYDRAAYKLRGEYARLNFPNLKDPTELGFKDCTR 176

Query: 184 LNALKSAVDAKIQAICQKVKRERAKKSA-KRSCILSDGGSKVASETESDKVEKVVDSCSS 242
           L+ LKS VDAKIQAICQKVK+ERAKK+A K+S +  +G S     TES K  KV      
Sbjct: 177 LDVLKSTVDAKIQAICQKVKKERAKKNAGKKSNV--NGKS-----TESQKPVKV------ 223

Query: 243 SSTMSPLIFGDGDLVSPTVSEDGFWKGENSQTSVSTEHPMMTTVESDFEGCSLARLPSYD 302
                                D      +  +S S+  P    +  +  GCS   +PSYD
Sbjct: 224 ---------------------DSNSSTPSPSSSSSSSPPPPPLLSGNNWGCSELVMPSYD 262

Query: 303 PELIWEVLAN 312
           PELIWEVLAN
Sbjct: 263 PELIWEVLAN 272

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356495715|ref|XP_003516719.1| PREDICTED: ethylene-responsive transcription factor ERF061-like [Glycine max]

 Score =  310 bits (795), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 198/332 (59%), Positives = 231/332 (69%), Gaps = 42/332 (12%)

Query: 1   MEGFQENNQPFAFND--GADIRSSLSQLILTGGTNTIDSIFSRCTPTST----------- 47
           MEG ++ N      D  G +I SSLS+LILT GTNT+DSIFS C PT+T           
Sbjct: 1   MEGMRDRNSQLELQDQEGTNIGSSLSKLILTSGTNTLDSIFSNC-PTTTNGSTRSNSVLD 59

Query: 48  ----MSSPAFEPLGSSVYLRQRDLLQKFSEENKTTNTTLARNYLTNIPLQNCAYTSSSTC 103
                 S  +EPLGSSVYLRQRD+LQKF +E++   +        N+P  + + + ++ C
Sbjct: 60  YLEPFGSLGYEPLGSSVYLRQRDILQKFYQESRGNGSY-------NVPTSSLSNSLTNPC 112

Query: 104 IAPPKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDSAEAAAYAYDRAAYKLRGEYA 163
               KKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYD+AEAAAYAYDRAAYKLRGEYA
Sbjct: 113 ----KKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDTAEAAAYAYDRAAYKLRGEYA 168

Query: 164 RLNFPNLKDPSKLGFGDCSKLNALKSAVDAKIQAICQKVKRERAKKSAKRSCILSDGGSK 223
           RLNFPNLKDP+KLGFGD ++LNALKS+VDAKIQAICQKVKRERAKK+A +          
Sbjct: 169 RLNFPNLKDPTKLGFGDSARLNALKSSVDAKIQAICQKVKRERAKKNAAKKL-------H 221

Query: 224 VASETESDKVEKVVDSCSSSSTMSPLIFGD---GDLVSPTVSEDGFWKGENSQT--SVST 278
            +++ +  + EK   S S S + SP IF D     L SP VSEDGFWKGENS +  SV T
Sbjct: 222 NSTDPKRGQSEKPSSSSSPSPSPSPSIFNDNWANQLFSPAVSEDGFWKGENSHSPASVLT 281

Query: 279 EHPMMTTVESDFEGCSLARLPSYDPELIWEVL 310
           E     T E  FEGCSLARLPS+DPELIWEVL
Sbjct: 282 ECQTEET-ELLFEGCSLARLPSFDPELIWEVL 312

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388499454|gb|AFK37793.1| unknown [Medicago truncatula]

 Score =  293 bits (751), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 194/319 (60%), Positives = 231/319 (72%), Gaps = 32/319 (10%)

Query: 18  DIRSSLSQLILTGGTNTIDSIFSRCTPTST-------MSSPAFEPLGSSVYLRQRDLLQK 70
           DI S LS LIL+  TNT+DSIFS    T+T       +    FEPLGSSVYLRQRD+LQK
Sbjct: 8   DIGSCLSNLILSSSTNTLDSIFSDIPSTNTTTDSTTFLGCSNFEPLGSSVYLRQRDILQK 67

Query: 71  FSEENKTTNTTLARNYLTNIPL---------QNCAYTSSSTCIAPPKKKLYRGVRQRHWG 121
           F EE++  N + A +  +N  L              +S ++ + P KKKLYRGVRQRHWG
Sbjct: 68  FYEESRL-NGSFAPSSFSNQSLLTPSLYTTNSTSISSSFTSLVNPCKKKLYRGVRQRHWG 126

Query: 122 KWVAEIRLPQNRMRVWLGTYDSAEAAAYAYDRAAYKLRGEYARLNFPNLKDPSKLGFGDC 181
           KWVAEIRLPQNRMRVWLGTY++AEAAAYAYDRAAYKLRGEYARLNFPNLKDP+KLGFGD 
Sbjct: 127 KWVAEIRLPQNRMRVWLGTYETAEAAAYAYDRAAYKLRGEYARLNFPNLKDPTKLGFGDS 186

Query: 182 SKLNALKSAVDAKIQAICQKVKRERAKKSAKRSCILSDGGSKVASETESDK-VEKVVD-- 238
           ++LNALK+ VDAKIQAICQKVKRE+AKK A +    + G +    +T+SDK  +K+++  
Sbjct: 187 TRLNALKNPVDAKIQAICQKVKREKAKKIAAKEMKKNSGSNN--HDTKSDKNSDKIINSS 244

Query: 239 ---SCSSSSTMSPLIFGD---GDLVSPTVSEDGFWKGENSQTSVSTEHPMMTTVESDFEG 292
              S SSS  +SPL+F D    +L SPTVSEDG WKGENS  SVST    M T E++FE 
Sbjct: 245 SCSSSSSSLPLSPLVFCDDWVNELFSPTVSEDGIWKGENSPNSVST----MVTEETEFED 300

Query: 293 CSLARLPSYDPELIWEVLA 311
           CSLAR+PS+DPELIWEVLA
Sbjct: 301 CSLARMPSFDPELIWEVLA 319

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357481437|ref|XP_003611004.1| Ethylene-responsive transcription factor ERF061 [Medicago truncatula] gi|355512339|gb|AES93962.1| Ethylene-responsive transcription factor ERF061 [Medicago truncatula]

 Score =  279 bits (714), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 194/318 (61%), Positives = 232/318 (72%), Gaps = 30/318 (9%)

Query: 18  DIRSSLSQLILTGGTNTIDSIFSRCTPTST-------MSSPAFEPLGSSVYLRQRDLLQK 70
           DI S LS LIL+  TNT+DSIFS    T+T       +    FEPLGSSVYLRQRD+LQK
Sbjct: 8   DIGSCLSNLILSSSTNTLDSIFSDIPSTNTTTDSTTFLGCSNFEPLGSSVYLRQRDILQK 67

Query: 71  FSEENKTTNTTLARNYLTNIPLQNCAYTSSST--------CIAPPKKKLYRGVRQRHWGK 122
           F EE++   + +  ++     L    YT++ST         + P KKKLYRGVRQRHWGK
Sbjct: 68  FYEESRLNGSFVPSSFSNQSLLTPSLYTTNSTSISSSFTSLVNPCKKKLYRGVRQRHWGK 127

Query: 123 WVAEIRLPQNRMRVWLGTYDSAEAAAYAYDRAAYKLRGEYARLNFPNLKDPSKLGFGDCS 182
           WVAEIRLPQNRMRVWLGTY++AEAAAYAYDRAAYKLRGEYARLNFPNLKDP+KLGFGD +
Sbjct: 128 WVAEIRLPQNRMRVWLGTYETAEAAAYAYDRAAYKLRGEYARLNFPNLKDPTKLGFGDST 187

Query: 183 KLNALKSAVDAKIQAICQKVKRERAKKSAKRSCILSDGGSKVASETESDK-VEKVVD--- 238
           +LNALK++VDAKIQAICQKVKRE+AKK A +    + G +    +T+SDK  +K+++   
Sbjct: 188 RLNALKNSVDAKIQAICQKVKREKAKKIAAKKMKKNSGSNN--HDTKSDKNSDKIINSSS 245

Query: 239 --SCSSSSTMSPLIFGD---GDLVSPTVSEDGFWKGENSQTSVSTEHPMMTTVESDFEGC 293
             S SSS  +SPL+F D    +L SPTVSEDG WKGENS  SVST    M T E++FE C
Sbjct: 246 CSSSSSSLPLSPLVFCDDWVNELFSPTVSEDGIWKGENSPNSVST----MVTEETEFEDC 301

Query: 294 SLARLPSYDPELIWEVLA 311
           SLAR+PS+DPELIWEVLA
Sbjct: 302 SLARMPSFDPELIWEVLA 319

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356539368|ref|XP_003538170.1| PREDICTED: ethylene-responsive transcription factor ERF061-like [Glycine max]

 Score =  275 bits (704), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 186/339 (54%), Positives = 213/339 (62%), Gaps = 43/339 (12%)

Query: 1   MEGFQENNQPFAFND--GADIRSSLSQLILTGG--TNTIDSIFSRCTPTSTMS------- 49
           MEG ++        D  G +I SSLS+LIL  G  TNT+DSIFS C  T+  S       
Sbjct: 1   MEGMRDTKSQLEIQDQEGTNIGSSLSKLILASGSGTNTLDSIFSNCPQTTNGSTSSNSVL 60

Query: 50  -------SPAFEPLGSSVYLRQRDLLQKFSEENKTTNTTLAR----NYLTNIPLQNCAYT 98
                  S   E LGSSVYLRQRD+LQKF +E++              L N  + +   +
Sbjct: 61  DDLEPFRSSGCESLGSSVYLRQRDILQKFYQESRGNGNNNGSYNIPRSLANTSINSVCRS 120

Query: 99  SSSTCIA---PPKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDSAEAAAYAYDRAA 155
           SS +C +   P KKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYD+AEAAAYAYDRAA
Sbjct: 121 SSLSCYSLTKPCKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDTAEAAAYAYDRAA 180

Query: 156 YKLRGEYARLNFPNLKDPSKLGFGDCSKLNALKSAVDAKIQAICQKVKRERAKKSAKRSC 215
           YKLRGEYARLNFPNLKDP+KLGFGD ++LNALKS+VDAKIQAICQKVK+ERAKK+A +  
Sbjct: 181 YKLRGEYARLNFPNLKDPTKLGFGDSARLNALKSSVDAKIQAICQKVKKERAKKNATKKK 240

Query: 216 ILSDGGSKVASETESDKVEKVVDSCSSSSTMSPLIFGD---GDLVSPTVSEDGFWKGENS 272
           +    GS   +  +         S  S     P IF D    DL SP             
Sbjct: 241 LHDSSGSTDPNGGQKINSSSCSSSSLSQPLSPPSIFYDNWANDLFSP------------- 287

Query: 273 QTSVSTEHPMMTTVESDFEGCSLARLPSYDPELIWEVLA 311
             SVSTE   M T E  FEGCSLARLPS+DPELIWEVLA
Sbjct: 288 -ASVSTECQSMET-EELFEGCSLARLPSFDPELIWEVLA 324

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297742325|emb|CBI34474.3| unnamed protein product [Vitis vinifera]

 Score =  266 bits (679), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 153/213 (71%), Positives = 176/213 (82%), Gaps = 8/213 (3%)

Query: 1   MEGFQENNQPFAFNDGADIRSSLSQLILTGGTNTIDSIFSRCTPTSTMSSPAFEPLGSSV 60
           ME  QENN  F+F  G DIRSSLSQL+LT G+NT+DSIFS C P++++++P  EPLGSSV
Sbjct: 1   MEKMQENNLQFSFQHGVDIRSSLSQLLLTSGSNTLDSIFSHCPPSTSVTNPVLEPLGSSV 60

Query: 61  YLRQRDLLQKFSEENKTTNTTLARNYLTNIPLQNCAYTSSSTCIAPPKKKLYRGVRQRHW 120
           YLRQRDLLQKFSEE++ +   +  N LT       +    S  + P KKKLYRGVRQRHW
Sbjct: 61  YLRQRDLLQKFSEESRASGR-ITSNSLT-------SSLHHSQFLNPCKKKLYRGVRQRHW 112

Query: 121 GKWVAEIRLPQNRMRVWLGTYDSAEAAAYAYDRAAYKLRGEYARLNFPNLKDPSKLGFGD 180
           GKWVAEIRLPQNRMRVWLGT+D+AEAAAYAYDRAAYKLRGEYARLNFPNL+D SKLGFGD
Sbjct: 113 GKWVAEIRLPQNRMRVWLGTFDTAEAAAYAYDRAAYKLRGEYARLNFPNLRDASKLGFGD 172

Query: 181 CSKLNALKSAVDAKIQAICQKVKRERAKKSAKR 213
           C++LNALKS+VDAKIQAICQKVKRERA K+ KR
Sbjct: 173 CARLNALKSSVDAKIQAICQKVKRERAHKTTKR 205

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|212717204|gb|ACJ37443.1| AP2 domain-containing transcription factor 9 [Glycine max]

 Score =  263 bits (671), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 180/334 (53%), Positives = 207/334 (61%), Gaps = 43/334 (12%)

Query: 1   MEGFQENNQPFAFND--GADIRSSLSQLILTGG--TNTIDSIFSRCTPTSTMS------- 49
           MEG ++        D  G +I SSLS+LIL  G  TNT+DSIFS C  T+  S       
Sbjct: 1   MEGMRDTKSQLEIQDQEGTNIGSSLSKLILASGSGTNTLDSIFSNCPQTTNGSTSSNSVL 60

Query: 50  -------SPAFEPLGSSVYLRQRDLLQKFSEENKTTNTTLAR----NYLTNIPLQNCAYT 98
                  S   E LGSSVYLRQRD+LQKF +E++              L N  + +   +
Sbjct: 61  DDLEPFRSSGCESLGSSVYLRQRDILQKFYQESRGNGNNNGSYNIPRSLANTSINSVCRS 120

Query: 99  SSSTCIA---PPKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDSAEAAAYAYDRAA 155
           SS +C +   P KKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYD+AEAAAYAYDRAA
Sbjct: 121 SSLSCYSLTKPCKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDTAEAAAYAYDRAA 180

Query: 156 YKLRGEYARLNFPNLKDPSKLGFGDCSKLNALKSAVDAKIQAICQKVKRERAKKSAKRSC 215
           YKLRGEYARLNFPNLKDP+KLGFGD ++LNALKS+VDAKIQAICQKVK+ERAKK+A +  
Sbjct: 181 YKLRGEYARLNFPNLKDPTKLGFGDSARLNALKSSVDAKIQAICQKVKKERAKKNATKKK 240

Query: 216 ILSDGGSKVASETESDKVEKVVDSCSSSSTMSPLIFGD---GDLVSPTVSEDGFWKGENS 272
           +    GS   +  +         S  S     P IF D    DL SP             
Sbjct: 241 LHDSSGSTDPNGGQKINSSSCSSSSLSQPLSPPSIFYDNWANDLFSP------------- 287

Query: 273 QTSVSTEHPMMTTVESDFEGCSLARLPSYDPELI 306
             SVSTE   M T E  FEGCSLARLPS+DPEL 
Sbjct: 288 -ASVSTECQSMET-EELFEGCSLARLPSFDPELF 319

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	312
TAIR|locus:2014185	335	AT1G64380 [Arabidopsis thalian	0.865	0.805	0.433	2e-47
TAIR|locus:2029491	334	RAP2.4 "related to AP2 4" [Ara	0.451	0.422	0.426	4.5e-27
TAIR|locus:2119555	388	AT4G13620 [Arabidopsis thalian	0.461	0.371	0.392	8.5e-24
TAIR|locus:2135282	272	AT4G39780 [Arabidopsis thalian	0.288	0.330	0.569	2.3e-23
TAIR|locus:2015061	261	AT1G22190 [Arabidopsis thalian	0.294	0.352	0.524	1.9e-21
TAIR|locus:2034295	314	AT1G36060 [Arabidopsis thalian	0.471	0.468	0.404	3.9e-21
TAIR|locus:2060385	261	AT2G22200 [Arabidopsis thalian	0.410	0.490	0.408	2.7e-20
TAIR|locus:2171840	277	AT5G65130 [Arabidopsis thalian	0.285	0.321	0.458	2.5e-17
TAIR|locus:2051359	336	ERF53 "ERF domain 53" [Arabido	0.368	0.342	0.415	8.2e-17
TAIR|locus:2061956	171	ERF71 "ethylene response facto	0.198	0.362	0.516	2.1e-13

TAIR|locus:2014185 AT1G64380 [Arabidopsis thaliana (taxid:3702)]

 Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
 Identities = 131/302 (43%), Positives = 158/302 (52%)

Query:    34 TIDSIFSRCTPTSTMSSPAFEPLGSSVYLRQRDLLQKFSEENKTTNT--------TLARN 85
             T  S+ S  T  +T + P    LGSSVYLRQRD+++KF  +N+  +T        T   +
Sbjct:    43 TPSSVESATTSFNTHNPPPPPQLGSSVYLRQRDIIEKFHLQNRAISTPHPPLFSSTYDHH 102

Query:    86 YLTNIPLQNCAYTSSSTCIAP-------PKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWL 138
               + + LQ  A + ++   A         KKKLYRGVRQRHWGKWVAEIRLPQNRMRVWL
Sbjct:   103 QTSELMLQAAAGSPAAAFAAALAAGRVTKKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWL 162

Query:   139 GTXXXXXXXXXXXXXXXXKLRGEYARLNFPNLKDPSKL-GFGDCSKLNALKSAVDAKIQA 197
             GT                KLRGEYARLNFPNLKDPS+L G GD SKL ALK+AVD KIQ+
Sbjct:   163 GTYDTAEAAAYAYDRAAYKLRGEYARLNFPNLKDPSELLGLGDSSKLIALKNAVDGKIQS 222

Query:   198 ICQXXXXXXXXXXXXXXCILSDGGSKVASETEXXXXXXXXXXXXXXXTMSPLIFGDGDLV 257
             ICQ                +S   S  A ++                T + +   D   V
Sbjct:   223 ICQRVRKERAKKSVK----VSKNSSATA-DSSCLSSPEILSSSPVTTTTTAVTSEDSYWV 277

Query:   258 SPTVSEDGFWKGENSQ-TSVSTEHPMMTTVES------DFEGCSLARLPSYDPELIWEVL 310
             SP     G    ENS   SVS    +  T E       D +G  LAR+PS+DPELIWEVL
Sbjct:   278 SPM----GLCNSENSSPVSVSVPSEVPATAEEEAMMGVDTDGFLLARMPSFDPELIWEVL 333

Query:   311 AN 312
             AN
Sbjct:   334 AN 335

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0010200 "response to chitin" evidence=IEP

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2029491 RAP2.4 "related to AP2 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 276 (102.2 bits), Expect = 4.5e-27, Sum P(2) = 4.5e-27
 Identities = 64/150 (42%), Positives = 85/150 (56%)

Query:    58 SSVYLRQRDLLQKFSEENKTTNTTLARNYLTNIPLQNCAYTSSSTCIA----PPKK--KL 111
             S ++  Q  +       +   N + + N L+  PL       + +C A     P K  KL
Sbjct:    93 SQIHQIQSQIHHPLPPTHHNNNNSFS-NLLSPKPLLMKQSGVAGSCFAYGSGVPSKPTKL 151

Query:   112 YRGVRQRHWGKWVAEIRLPQNRMRVWLGTXXXXXXXXXXXXXXXXKLRGEYARLNFPNLK 171
             YRGVRQRHWGKWVAEIRLP+NR R+WLGT                KLRG++ARLNFPNL+
Sbjct:   152 YRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLR 211

Query:   172 -DPSKLGFGDCSKLNALKSAVDAKIQAICQ 200
              + S +G GD  +   L S+VDAK++AIC+
Sbjct:   212 HNGSHIG-GDFGEYKPLHSSVDAKLEAICK 240

GO:0003677 "DNA binding" evidence=IEA;IDA;TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;IDA;TAS

GO:0005634 "nucleus" evidence=ISM;IC;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0005515 "protein binding" evidence=IPI

GO:0006970 "response to osmotic stress" evidence=IEP

GO:0071472 "cellular response to salt stress" evidence=IEP

GO:0009414 "response to water deprivation" evidence=IEP;IMP

GO:0009416 "response to light stimulus" evidence=IEP

GO:0009651 "response to salt stress" evidence=IEP

GO:0009873 "ethylene mediated signaling pathway" evidence=IMP

GO:0010017 "red or far-red light signaling pathway" evidence=IGI

GO:0009611 "response to wounding" evidence=IEP

GO:0009736 "cytokinin mediated signaling pathway" evidence=IMP

GO:0045595 "regulation of cell differentiation" evidence=IMP

GO:0009409 "response to cold" evidence=IEP

GO:0043565 "sequence-specific DNA binding" evidence=IDA

TAIR|locus:2119555 AT4G13620 [Arabidopsis thaliana (taxid:3702)]

 Score = 233 (87.1 bits), Expect = 8.5e-24, Sum P(2) = 8.5e-24
 Identities = 60/153 (39%), Positives = 78/153 (50%)

Query:    50 SPAFEPLGSSVYLRQRDLLQKFSEENKTTNTTLAR---NY-LTNIPLQNCAYTSSSTCIA 105
             SP  + + +S Y   ++   ++ E NKT     ++   NY L+    Q     +      
Sbjct:   167 SPYHKYIPNSFYQSDQNR-NEWVEINKTLTNYPSKGFGNYWLSTTKTQPMKSKTRKVVQT 225

Query:   106 PPKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTXXXXXXXXXXXXXXXXKLRGEYARL 165
                 KLYRGVRQRHWGKWVAEIRLP+NR RVWLGT                 LRGE+A L
Sbjct:   226 TTPTKLYRGVRQRHWGKWVAEIRLPRNRTRVWLGTFETAEQAAMAYDTAAYILRGEFAHL 285

Query:   166 NFPNLKDPSKLGFGDCSKLNALKSAVDAKIQAI 198
             NFP+LK   K G   C     + S +++KIQ I
Sbjct:   286 NFPDLKHQLKSGSLRCM----IASLLESKIQQI 314

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

TAIR|locus:2135282 AT4G39780 [Arabidopsis thaliana (taxid:3702)]

 Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
 Identities = 53/93 (56%), Positives = 61/93 (65%)

Query:   109 KKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTXXXXXXXXXXXXXXXXKLRGEYARLNFP 168
             +KLYRGVRQRHWGKWVAEIRLP+NR R+WLGT                KLRGE+ARLNFP
Sbjct:    90 QKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAAMAYDLAAYKLRGEFARLNFP 149

Query:   169 NLK-DPSKLGFGDCSKLNALKSAVDAKIQAICQ 200
               + +    G G C   N L S+VDAK+Q ICQ
Sbjct:   150 QFRHEDGYYGGGSC--FNPLHSSVDAKLQEICQ 180

GO:0003677 "DNA binding" evidence=IEA;TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IC

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

TAIR|locus:2015061 AT1G22190 [Arabidopsis thaliana (taxid:3702)]

 Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
 Identities = 53/101 (52%), Positives = 65/101 (64%)

Query:   100 SSTCIAPPKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTXXXXXXXXXXXXXXXXKLR 159
             + T  A P K LYRGVRQRHWGKWVAEIRLP+NR R+WLGT                KLR
Sbjct:    72 TGTSAAKPTK-LYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLR 130

Query:   160 GEYARLNFPNLKDPSKLGFGDCSKLNALKSAVDAKIQAICQ 200
             G++ARLNFP+L+        D  +   L+S+VDAK++AICQ
Sbjct:   131 GDFARLNFPDLRH------ND--EYQPLQSSVDAKLEAICQ 163

GO:0003677 "DNA binding" evidence=IEA;TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IC

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0005515 "protein binding" evidence=IPI

GO:0006970 "response to osmotic stress" evidence=IEP

GO:0009409 "response to cold" evidence=IEP

GO:0009414 "response to water deprivation" evidence=IEP

GO:0043565 "sequence-specific DNA binding" evidence=IDA

TAIR|locus:2034295 AT1G36060 [Arabidopsis thaliana (taxid:3702)]

 Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
 Identities = 66/163 (40%), Positives = 89/163 (54%)

Query:    45 TSTMSSPAFEPLGSSVYLRQRDLLQ-KFSEENKTT-----NTTLARNYLTNIPLQNCAYT 98
             + +M+ P+    GS   L+Q +  Q +F  +N  T     N T   N++   P Q    T
Sbjct:    74 SGSMTYPS--SFGSD--LQQPENYQSQFHYQNTITYTHQDNNTCMLNFIE--PSQPGFMT 127

Query:    99 S---SSTCIAPPKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTXXXXXXXXXXXXXXX 155
                 SS  ++ P K LYRGVRQRHWGKWVAEIRLP+NR R+WLGT               
Sbjct:   128 QPGPSSGSVSKPAK-LYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDRAA 186

Query:   156 XKLRGEYARLNFPNLKDPSKLGFGDCSKLNALKSAVDAKIQAI 198
              KLRG+ ARLNFP L+  +     D  +   +++AVDAK++AI
Sbjct:   187 FKLRGDSARLNFPALRYQTGSSPSDTGEYGPIQAAVDAKLEAI 229

GO:0003677 "DNA binding" evidence=IEA;TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IC

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

TAIR|locus:2060385 AT2G22200 [Arabidopsis thaliana (taxid:3702)]

 Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
 Identities = 60/147 (40%), Positives = 80/147 (54%)

Query:    55 PLG-SSVYLRQRDLLQKFSEENKTTNTTLARNYLTNIPLQNCAYTSSSTCIAPPKKKLYR 113
             PLG + +   Q   +Q      ++T + L+ N    I ++N   ++S T      K LYR
Sbjct:    22 PLGLNQLTPYQIHQIQNQLNHRRSTISNLSPN---RIRMKNLTPSTSKT------KNLYR 72

Query:   114 GVRQRHWGKWVAEIRLPQNRMRVWLGTXXXXXXXXXXXXXXXXKLRGEYARLNFPNLKDP 173
             GVRQRHWGKWVAEIRLP+NR R+WLGT                +LRG+ A+LNFPNL   
Sbjct:    73 GVRQRHWGKWVAEIRLPKNRTRLWLGTFETAEKAALAYDQAAFQLRGDIAKLNFPNLIHE 132

Query:   174 SKLGFGDCSKLNALKSAVDAKIQAICQ 200
                       +N L S+VD K+QAIC+
Sbjct:   133 D---------MNPLPSSVDTKLQAICK 150

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IC

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

TAIR|locus:2171840 AT5G65130 [Arabidopsis thaliana (taxid:3702)]

 Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
 Identities = 44/96 (45%), Positives = 59/96 (61%)

Query:   104 IAPPKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTXXXXXXXXXXXXXXXXKLRGEYA 163
             +A    KLYRGVRQR WGKWVAEIRLP+NR R+WLGT                K+RG+ A
Sbjct:   103 VATKPVKLYRGVRQRQWGKWVAEIRLPKNRTRLWLGTFETAQEAALAYDQAAHKIRGDNA 162

Query:   164 RLNFPNLKDPSKLGFGDCSKLNALKSAVDAKIQAIC 199
             RLNFP++     +  G   ++  L  +++AKI++IC
Sbjct:   163 RLNFPDI-----VRQGHYKQI--LSPSINAKIESIC 191

GO:0003677 "DNA binding" evidence=IEA;TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IC

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

TAIR|locus:2051359 ERF53 "ERF domain 53" [Arabidopsis thaliana (taxid:3702)]

 Score = 209 (78.6 bits), Expect = 8.2e-17, P = 8.2e-17
 Identities = 49/118 (41%), Positives = 63/118 (53%)

Query:    54 EPLGSSVYLRQRDLLQKFSEENKTTNTTLARNYLTNIPLQNCAYTSSSTCIAP-PKKKLY 112
             +P  +    +Q+ LLQ + +  K + +   R  + N+  Q      +   + P    KLY
Sbjct:   130 QPYVAQQQQQQQHLLQYWRDILKLSPS--GRMMMMNMLRQESDLPLTRPPVQPFSATKLY 187

Query:   113 RGVRQRHWGKWVAEIRLPQNRMRVWLGTXXXXXXXXXXXXXXXXKLRGEYARLNFPNL 170
             RGVRQRHWGKWVAEIR P+NR R+WLGT                KLRGE ARLNFP L
Sbjct:   188 RGVRQRHWGKWVAEIRKPRNRTRLWLGTFDTAEEAAMAYDREAFKLRGETARLNFPEL 245

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;ISS;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=IDA

GO:0009651 "response to salt stress" evidence=IEP

GO:2000070 "regulation of response to water deprivation" evidence=IEP

TAIR|locus:2061956 ERF71 "ethylene response factor 71" [Arabidopsis thaliana (taxid:3702)]

 Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 32/62 (51%), Positives = 37/62 (59%)

Query:   108 KKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTXXXXXXXXXXXXXXXXKLRGEYARLNF 167
             +K LYRG+RQR WGKW AEIR P   +RVWLGT                K+RG  A+LNF
Sbjct:    46 RKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNF 105

Query:   168 PN 169
             PN
Sbjct:   106 PN 107

GO:0003677 "DNA binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;ISS;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0034059 "response to anoxia" evidence=IGI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9C7W2	ERF61_ARATH	No assigned EC number	0.4955	0.9551	0.8895	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	312
smart00380	64	smart00380, AP2, DNA-binding domain in plant prote	3e-33
cd00018	61	cd00018, AP2, DNA-binding domain found in transcri	1e-30
pfam00847	53	pfam00847, AP2, AP2 domain	3e-14

>gnl|CDD|197689 smart00380, AP2, DNA-binding domain in plant proteins such as APETALA2 and EREBPs

 Score =  116 bits (293), Expect = 3e-33
 Identities = 45/63 (71%), Positives = 48/63 (76%)

Query: 112 YRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDSAEAAAYAYDRAAYKLRGEYARLNFPNLK 171
           YRGVRQR WGKWVAEIR P    RVWLGT+D+AE AA AYDRAA+K RG  ARLNFPN  
Sbjct: 2   YRGVRQRPWGKWVAEIRDPSKGKRVWLGTFDTAEEAARAYDRAAFKFRGRSARLNFPNSL 61

Query: 172 DPS 174
             S
Sbjct: 62  YDS 64

Length = 64

>gnl|CDD|237985 cd00018, AP2, DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein)

 Score =  109 bits (275), Expect = 1e-30
 Identities = 42/61 (68%), Positives = 46/61 (75%)

Query: 110 KLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDSAEAAAYAYDRAAYKLRGEYARLNFPN 169
             YRGVRQR WGKWVAEIR P    R+WLGT+D+AE AA AYDRAA KLRG  A LNFP+
Sbjct: 1   SKYRGVRQRPWGKWVAEIRDPSGGRRIWLGTFDTAEEAARAYDRAALKLRGSSAVLNFPD 60

Query: 170 L 170
            
Sbjct: 61  S 61

In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE), a promotor element essential for ethylene responsiveness. EREBPs and the C-repeat binding factor CBF1, which is involved in stress response, contain a single copy of the AP2 domain. APETALA2-like proteins, which play a role in plant development contain two copies. Length = 61

>gnl|CDD|216148 pfam00847, AP2, AP2 domain

 Score = 65.7 bits (161), Expect = 3e-14
 Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 4/52 (7%)

Query: 112 YRGVRQRH-WGKWVAEIRLPQNRM--RVWLGTYDSAEAAAYAYDRAAYKLRG 160
           Y+GVR    WG+WVAEIR P  +   R  LGT+ + EAA  A   A  KLRG
Sbjct: 3   YKGVRYDKRWGRWVAEIRDPGEKKKKRFSLGTFGTEEAAR-AAIAARLKLRG 53

This 60 amino acid residue domain can bind to DNA and is found in transcription factor proteins. Length = 53

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	312
smart00380	64	AP2 DNA-binding domain in plant proteins such as A	99.82
cd00018	61	AP2 DNA-binding domain found in transcription regu	99.82
PHA00280	121	putative NHN endonuclease	99.74
PF00847	56	AP2: AP2 domain; InterPro: IPR001471 Pathogenesis-	99.08
PF14657	46	Integrase_AP2: AP2-like DNA-binding integrase doma	80.95

>smart00380 AP2 DNA-binding domain in plant proteins such as APETALA2 and EREBPs

Probab=99.82  E-value=2.4e-20  Score=139.87  Aligned_cols=63  Identities=70%  Similarity=1.140  Sum_probs=60.3

Q ss_pred             ceeeeEECCCCcEEEEEecCCCCeEEeccCCCCHHHHHHHHHHHHHHhhCCCCCCCCCCCCCC
Q 045091          111 LYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDSAEAAAYAYDRAAYKLRGEYARLNFPNLKDP  173 (312)
Q Consensus       111 ~YRGVr~r~~GKW~A~Ir~p~~gkri~LGtFdT~EEAArAYD~AA~kl~G~~A~lNFP~s~y~  173 (312)
                      +||||+++++|||+|+|+++.+|+++|||+|+|+||||+|||.|++++||.++.+|||...|+
T Consensus         1 ~~kGV~~~~~gkw~A~I~~~~~~k~~~lG~f~t~eeAa~Ayd~a~~~~~g~~a~~Nf~~~~y~   63 (64)
T smart00380        1 KYRGVRQRPWGKWVAEIRDPSKGKRVWLGTFDTAEEAARAYDRAAFKFRGRSARLNFPNSLYD   63 (64)
T ss_pred             CEeeEEeCCCCeEEEEEEecCCCcEEecCCCCCHHHHHHHHHHHHHHhcCCccccCCCCccCC
Confidence            599998888999999999988999999999999999999999999999999999999999885

>cd00018 AP2 DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein)

Probab=99.82  E-value=2.8e-20  Score=137.78  Aligned_cols=61  Identities=69%  Similarity=1.140  Sum_probs=57.4

Q ss_pred             CceeeeEECCCCcEEEEEecCCCCeEEeccCCCCHHHHHHHHHHHHHHhhCCCCCCCCCCC
Q 045091          110 KLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDSAEAAAYAYDRAAYKLRGEYARLNFPNL  170 (312)
Q Consensus       110 S~YRGVr~r~~GKW~A~Ir~p~~gkri~LGtFdT~EEAArAYD~AA~kl~G~~A~lNFP~s  170 (312)
                      |+||||+++++|||+|+|+++..|+++|||+|+|+||||+|||.|+++++|.++.+|||++
T Consensus         1 s~~~GV~~~~~gkw~A~I~~~~~gk~~~lG~f~t~eeAa~Ayd~a~~~~~g~~a~~Nf~~~   61 (61)
T cd00018           1 SKYRGVRQRPWGKWVAEIRDPSGGRRIWLGTFDTAEEAARAYDRAALKLRGSSAVLNFPDS   61 (61)
T ss_pred             CCccCEEECCCCcEEEEEEeCCCCceEccCCCCCHHHHHHHHHHHHHHhcCCccccCCCCC
Confidence            6899998888899999999866699999999999999999999999999999999999974

In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE), a promotor element essential for ethylene responsiveness. EREBPs and the C-repeat binding factor CBF1, which is involved in stress response, contain a single copy of the AP2 domain. APETALA2-like proteins, which play a role in plant development contain two copies.

>PHA00280 putative NHN endonuclease

Probab=99.74  E-value=3.5e-18  Score=144.59  Aligned_cols=84  Identities=17%  Similarity=0.241  Sum_probs=77.2

Q ss_pred             CCCcccccccCCcccccccCCCccccCCCCCCceeeeE-ECCCCcEEEEEecCCCCeEEeccCCCCHHHHHHHHHHHHHH
Q 045091           79 NTTLARNYLTNIPLQNCAYTSSSTCIAPPKKKLYRGVR-QRHWGKWVAEIRLPQNRMRVWLGTYDSAEAAAYAYDRAAYK  157 (312)
Q Consensus        79 n~~~~~N~~~nlr~~t~~~ns~n~~~~p~~~S~YRGVr-~r~~GKW~A~Ir~p~~gkri~LGtFdT~EEAArAYD~AA~k  157 (312)
                      ++++.+|++.|||.+++.+|++|+.+.+.++|+||||. .+..|||+|+|++  +||+++||.|+++|+|+.||+ ++.+
T Consensus        36 dg~~~dnri~NLr~~T~~eN~~N~~~~~~N~SG~kGV~~~k~~~kw~A~I~~--~gK~~~lG~f~~~e~A~~a~~-~~~~  112 (121)
T PHA00280         36 DGNPLNDALDNLRLALPKENSWNMKTPKSNTSGLKGLSWSKEREMWRGTVTA--EGKQHNFRSRDLLEVVAWIYR-TRRE  112 (121)
T ss_pred             CCCCCCCcHHHhhhcCHHHHhcccCCCCCCCCCCCeeEEecCCCeEEEEEEE--CCEEEEcCCCCCHHHHHHHHH-HHHH
Confidence            67888999999999999999999988889999999995 5668999999996  999999999999999999997 7789


Q ss_pred             hhCCCCCC
Q 045091          158 LRGEYARL  165 (312)
Q Consensus       158 l~G~~A~l  165 (312)
                      +||+||+.
T Consensus       113 lhGeFa~~  120 (121)
T PHA00280        113 LHGQFARF  120 (121)
T ss_pred             HhhccccC
Confidence            99999853

>PF00847 AP2: AP2 domain; InterPro: IPR001471 Pathogenesis-related genes transcriptional activator binds to the GCC-box pathogenesis-related promoter element and activates the plant's defence genes

Probab=99.08  E-value=2.7e-10  Score=82.33  Aligned_cols=52  Identities=37%  Similarity=0.549  Sum_probs=44.7

Q ss_pred             CceeeeE-ECCCCcEEEEEecCC-C--CeEEeccCCCCHHHHHHHHHHHHHHhhCC
Q 045091          110 KLYRGVR-QRHWGKWVAEIRLPQ-N--RMRVWLGTYDSAEAAAYAYDRAAYKLRGE  161 (312)
Q Consensus       110 S~YRGVr-~r~~GKW~A~Ir~p~-~--gkri~LGtFdT~EEAArAYD~AA~kl~G~  161 (312)
                      |+|+||+ .+..++|+|+|+++. +  +++++||.|++++||++||+.++.+++|+
T Consensus         1 s~~~GV~~~~~~~~W~a~i~~~~~~g~~k~f~~g~fg~~~eA~~~a~~~r~~~~~e   56 (56)
T PF00847_consen    1 SGYKGVSWDKRRGRWRAQIRVWSENGKRKRFSVGKFGFEEEAKRAAIEARKELEGE   56 (56)
T ss_dssp             SSSTTEEEETTTTEEEEEEEECCCTTEEEEEEECCCCCHHHHHHHHHHHHHHCTS-
T ss_pred             CCcEEEEEcCCCCEEEEEEEEcccCcccEEEeCccCCCHHHHHHHHHHHHHHhcCC
Confidence            6899996 455799999999842 2  49999999999999999999999999885

Ethylene, chemically the simplest plant hormone, participates in a number of stress responses and developmental processes: e.g., fruit ripening, inhibition of stem and root elongation, promotion of seed germination and flowering, senescence of leaves and flowers, and sex determination []. DNA sequence elements that confer ethylene responsiveness have been shown to contain two 11bp GCC boxes, which are necessary and sufficient for transcriptional control by ethylene. Ethylene responsive element binding proteins (EREBPs) have now been identified in a variety of plants. The proteins share a similar domain of around 59 amino acids, which interacts directly with the GCC box in the ERE.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent; PDB: 3IGM_A 3GCC_A 1GCC_A 2GCC_A.

>PF14657 Integrase_AP2: AP2-like DNA-binding integrase domain

Probab=80.95  E-value=6.3  Score=27.68  Aligned_cols=38  Identities=11%  Similarity=0.138  Sum_probs=29.7

Q ss_pred             cEEEEEe--cCCCC--eEEeccCCCCHHHHHHHHHHHHHHhh
Q 045091          122 KWVAEIR--LPQNR--MRVWLGTYDSAEAAAYAYDRAAYKLR  159 (312)
Q Consensus       122 KW~A~Ir--~p~~g--kri~LGtFdT~EEAArAYD~AA~kl~  159 (312)
                      +|...|.  ++..|  ++++-+.|.|..||..+...+...+.
T Consensus         1 ~w~~~v~g~~~~~Gkrk~~~k~GF~TkkeA~~~~~~~~~~~~   42 (46)
T PF14657_consen    1 TWYYRVYGYDDETGKRKQKTKRGFKTKKEAEKALAKIEAELE   42 (46)
T ss_pred             CEEEEEEEEECCCCCEEEEEcCCCCcHHHHHHHHHHHHHHHH
Confidence            5888883  44445  77888999999999999988776654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	312
2gcc_A	70	Solution Structure Of The Gcc-Box Binding Domain, N		2e-09
1gcc_A	63	Solution Nmr Structure Of The Complex Of Gcc-Box Bi		3e-09

>pdb|2GCC|A Chain A, Solution Structure Of The Gcc-Box Binding Domain, Nmr, Minimized Mean Structure Length = 70

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/62 (50%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 108 KKKLYRGVRQRHWGKWVAEIRLP-QNRMRVWLGTXXXXXXXXXXXXXXXXKLRGEYARLN 166
           K K YRGVRQR WGK+ AEIR P +N  RVWLGT                ++RG  A LN
Sbjct: 2   KGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLN 61
Query: 167 FP 168
           FP
Sbjct: 62  FP 63

>pdb|1GCC|A Chain A, Solution Nmr Structure Of The Complex Of Gcc-Box Binding Domain Of Aterf1 And Gcc-Box Dna, Minimized Average Structure Length = 63

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/60 (50%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 110 KLYRGVRQRHWGKWVAEIRLP-QNRMRVWLGTXXXXXXXXXXXXXXXXKLRGEYARLNFP 168
           K YRGVRQR WGK+ AEIR P +N  RVWLGT                ++RG  A LNFP
Sbjct: 1   KHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFP 60
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	312
1gcc_A	63	Ethylene responsive element binding factor 1; tran	2e-34

>1gcc_A Ethylene responsive element binding factor 1; transcription factor, protein-DNA complex, ethylene inducible; HET: DNA; NMR {Arabidopsis thaliana} SCOP: d.10.1.2 PDB: 2gcc_A 3gcc_A Length = 63

 Score =  119 bits (300), Expect = 2e-34
 Identities = 40/61 (65%), Positives = 48/61 (78%), Gaps = 1/61 (1%)

Query: 110 KLYRGVRQRHWGKWVAEIRLP-QNRMRVWLGTYDSAEAAAYAYDRAAYKLRGEYARLNFP 168
           K YRGVRQR WGK+ AEIR P +N  RVWLGT+++AE AA AYDRAA+++RG  A LNFP
Sbjct: 1   KHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFP 60

Query: 169 N 169
            
Sbjct: 61  L 61

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	312
1gcc_A	63	Ethylene responsive element binding factor 1; tran	99.89
1u3e_M	174	HNH homing endonuclease; HNH catalytic motif, heli	96.63
3igm_B	77	PF14_0633 protein; AP2 domain, specific transcript	88.77

>1gcc_A Ethylene responsive element binding factor 1; transcription factor, protein-DNA complex, ethylene inducible; HET: DNA; NMR {Arabidopsis thaliana} SCOP: d.10.1.2 PDB: 2gcc_A 3gcc_A

Probab=99.89  E-value=8.3e-24  Score=158.82  Aligned_cols=60  Identities=65%  Similarity=1.092  Sum_probs=56.9

Q ss_pred             ceeeeEECCCCcEEEEEecCC-CCeEEeccCCCCHHHHHHHHHHHHHHhhCCCCCCCCCCC
Q 045091          111 LYRGVRQRHWGKWVAEIRLPQ-NRMRVWLGTYDSAEAAAYAYDRAAYKLRGEYARLNFPNL  170 (312)
Q Consensus       111 ~YRGVr~r~~GKW~A~Ir~p~-~gkri~LGtFdT~EEAArAYD~AA~kl~G~~A~lNFP~s  170 (312)
                      +||||++++||||+|+|++|. +|+++|||+|+|+||||+|||.|+++++|.++.+|||.+
T Consensus         2 ~yrGV~~r~~gkw~A~I~~~~~~g~r~~LGtf~T~eeAA~AyD~Aa~~~~G~~a~~NFp~~   62 (63)
T 1gcc_A            2 HYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLR   62 (63)
T ss_dssp             CCTTEEEETTTEEEEEEEETTTTSEEEEEEEESSHHHHHHHHHHHHHHHHSSCCCCSSCTT
T ss_pred             CcccEeeCCCCcEEEEEccccCCCeEEEeeeCCCHHHHHHHHHHHHHHhcCcccccCCCCc
Confidence            699999889999999999986 489999999999999999999999999999999999974

>1u3e_M HNH homing endonuclease; HNH catalytic motif, helix-turn-helix DNA binding domain, PR complex, DNA binding protein-DNA complex; 2.92A {Bacillus phage SPO1} SCOP: d.4.1.3 d.285.1.1

Probab=96.63  E-value=3e-05  Score=66.75  Aligned_cols=88  Identities=11%  Similarity=0.037  Sum_probs=62.3

Q ss_pred             hhhhhHHHHhhhhcccC------CCCCcccccccCCcccccccCCCccccCCCCCCceeeeEECCCCcEEEEEecCCCCe
Q 045091           61 YLRQRDLLQKFSEENKT------TNTTLARNYLTNIPLQNCAYTSSSTCIAPPKKKLYRGVRQRHWGKWVAEIRLPQNRM  134 (312)
Q Consensus        61 ~lr~~~~~~~~~~~~~~------~n~~~~~N~~~nlr~~t~~~ns~n~~~~p~~~S~YRGVr~r~~GKW~A~Ir~p~~gk  134 (312)
                      |+.++=+...|......      -+++..+|++.||+.++...|..+....+.. ..++||...+.++|.+.|..  + +
T Consensus        53 ~~vHrlVa~~f~~~~~~~~~v~H~dg~k~nn~~~NL~~~t~~eN~~~~~~~~~~-~~~~g~~~~~~~k~~~vi~~--~-~  128 (174)
T 1u3e_M           53 FQVHRLVAIHFCEGYEEGLVVDHKDGNKDNNLSTNLRWVTQKINVENQMSRGTL-NVSKAQQIAKIKNQKPIIVI--S-P  128 (174)
T ss_dssp             EEHHHHHHHHHCTTCCTTCEEEETTSCTTCCCGGGEEEECHHHHHHHHHHHTCC-CCHHHHHHHHHHTCCCEEEE--C-T
T ss_pred             EEeHHHHHHHhcCCCCCCCEEEcCCCCCCCCCHHHcEECCHHHHhhcccccCcc-cceeeeeeccCCCCceEEEE--c-C
Confidence            45566545666665432      2567779999999999999988765443322 22577733445678899986  4 5


Q ss_pred             EEeccCCCCHHHHHHHHH
Q 045091          135 RVWLGTYDSAEAAAYAYD  152 (312)
Q Consensus       135 ri~LGtFdT~EEAArAYD  152 (312)
                      .++||.|++.+|||++|.
T Consensus       129 ~~~~~~f~s~~eAa~~~G  146 (174)
T 1u3e_M          129 DGIEKEYPSTKCACEELG  146 (174)
T ss_dssp             TSCEEEESCHHHHHHHHT
T ss_pred             CceEEeeCCHHHHHHHHC
Confidence            677999999999999974

>3igm_B PF14_0633 protein; AP2 domain, specific transcription FA protein-DNA complex, transcription-DNA complex; 2.20A {Plasmodium falciparum}

Probab=88.77  E-value=0.31  Score=37.94  Aligned_cols=27  Identities=22%  Similarity=0.262  Sum_probs=21.4

Q ss_pred             CCCceeee-EECCCCcEEEEEecCCCCeEE
Q 045091          108 KKKLYRGV-RQRHWGKWVAEIRLPQNRMRV  136 (312)
Q Consensus       108 ~~S~YRGV-r~r~~GKW~A~Ir~p~~gkri  136 (312)
                      .+|+|+|| +..+.+.|.|+-.+  +|++.
T Consensus         4 ~~Sg~pGVsw~kR~~~WlA~W~e--~g~rr   31 (77)
T 3igm_B            4 MSSGYPGVSWNKRMCAWLAFFYD--GASRR   31 (77)
T ss_dssp             CCSSSTTEEEETTTTEEEEEEEE--TTEEE
T ss_pred             CCCCCCcEEeecCCceEEEEEec--CCeEe
Confidence            57999999 56678999999887  56543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	312
d1gcca_	63	d.10.1.2 (A:) GCC-box binding domain {Mouse-ear cr	8e-31

>d1gcca_ d.10.1.2 (A:) GCC-box binding domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 63

class: Alpha and beta proteins (a+b)
fold: DNA-binding domain
superfamily: DNA-binding domain
family: GCC-box binding domain
domain: GCC-box binding domain
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  108 bits (272), Expect = 8e-31
 Identities = 40/60 (66%), Positives = 48/60 (80%), Gaps = 1/60 (1%)

Query: 110 KLYRGVRQRHWGKWVAEIRLP-QNRMRVWLGTYDSAEAAAYAYDRAAYKLRGEYARLNFP 168
           K YRGVRQR WGK+ AEIR P +N  RVWLGT+++AE AA AYDRAA+++RG  A LNFP
Sbjct: 1   KHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFP 60

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	312
d1gcca_	63	GCC-box binding domain {Mouse-ear cress (Arabidops	99.89

>d1gcca_ d.10.1.2 (A:) GCC-box binding domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: DNA-binding domain
superfamily: DNA-binding domain
family: GCC-box binding domain
domain: GCC-box binding domain
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.89  E-value=6.3e-24  Score=158.32  Aligned_cols=60  Identities=65%  Similarity=1.102  Sum_probs=56.1

Q ss_pred             ceeeeEECCCCcEEEEEecC-CCCeEEeccCCCCHHHHHHHHHHHHHHhhCCCCCCCCCCC
Q 045091          111 LYRGVRQRHWGKWVAEIRLP-QNRMRVWLGTYDSAEAAAYAYDRAAYKLRGEYARLNFPNL  170 (312)
Q Consensus       111 ~YRGVr~r~~GKW~A~Ir~p-~~gkri~LGtFdT~EEAArAYD~AA~kl~G~~A~lNFP~s  170 (312)
                      .||||+++++|||+|+|++| .+++++|||+|+|+||||+|||+|+++++|.++.+|||..
T Consensus         2 ~yrGVr~r~~gkw~A~Ir~~~~~~~r~~LGtf~t~eeAArAYD~aa~~~~G~~a~~NFP~~   62 (63)
T d1gcca_           2 HYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLR   62 (63)
T ss_dssp             CCTTEEEETTTEEEEEEEETTTTSEEEEEEEESSHHHHHHHHHHHHHHHHSSCCCCSSCTT
T ss_pred             CcceEeECCCCCEEEEEecCCCCCcEeccccccCHHHHHHHHHHHHHHhcCCCcccCCCcc
Confidence            59999988899999999987 4679999999999999999999999999999999999973