Citrus Sinensis ID: 045109

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420---
Protein Sequence
HVHHPPQTKGDSYHVVALRSSTLGSLKLDFKNQSSLVDIDLDADHHQQHDDDQKVSDNQCNGDLLDKFDKSKRKSEEFSTGLIRAKEWSNMIQEKIPKVVPKTPVRTPPGEPETINAWELMEGLEDVSPLRSPNHFRSFSFDFARGPSSLLDSDPPMSKLCEDVSAERKTMSMWLQMANGDDHGDSESNSKPFALEFDPDVIKTFRKSFQELSPRHPFHLRPLENDKLPAALDSLDVKKSNGAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEMIDDGGRGNVGACEACGDVRFVPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLTRCPICCF
Secondary Structure (PSIPRED)
cccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcHHHHHHHcccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccHHHHcccccccccccccccEEEEEcccccccccHHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHccccccccccEEEEccEEEccHHHHHHHHHHccHHHHHccccccccccccccccccccccccEEEccccccccEEEEccccHHHccccccccccccccEEEEccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccEEEEEEEEccccEEEcccccccHHccccccccccccccccccccccccccccccccccccccccccccccccHcccHHHHHccccccccccccccccccccHHcHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccHHcccccccccccccccccccccccccccEEEEEEEcHHHHHHHHHHHHHHHHHHHHcccEEEcccccccHHHHHHHHHHHccccccccccEEEEcccEcccHHHHHHHHHccHHHHHHHcccccccccccccccccccccEEEEEcccccccEEEEEEccccccccccccccccccccEEEEcccccccccEEcccccc
Coil and Loop (DISEMBL)
hvhhppqtkgdsyHVVALRSstlgslkldfknqsslvdidldadhhqqhdddqkvsdnqcngdlldkfdkskrkseeFSTGLIRAKEWSNMIQekipkvvpktpvrtppgepetiNAWELMEgledvsplrspnhfrsfsfdfargpsslldsdppmsklcEDVSAERKTMSMWLQMangddhgdsesnskpfalefdpDVIKTFRKSFqelsprhpfhlrplendklpaaldsldvkksngavldhkcgKEKLVVYFTSLRGIRKTYEDCCHVRVILKGlgvrvderdlsmhsGFKNELKELlgdgfsggglprvfvgkkyigGAEEIRRMHEEGQLEKVVEGCemiddggrgnvgaceacgdvrfvpcetcsgsckiyyekeeeveedseggwvgeeadfgfqrcpdcnengltrcpiccf
Flexible Loop (DISEMBL)
hvhhppqtkgdsyhvVALRSSTLGSLKLDFKNQSSLVDIDLDADHHQQhdddqkvsdnqCNGDlldkfdkskrkseefstglirakewsnmiqekipkvvpktpvrtppgEPETINAWELMEGLEDVSPLRSPNHFRSFSFDFARGpsslldsdppmSKLCEDVSAERKTMSMWLQMANGDDHGDSESNSKPFALEFDPDVIKTFRKSFQELSPRHPFHLRPLENDKLPAALDSLDVKKSNgavldhkcgkeKLVVYFTSLRGIRKTYEDCCHVRVILKGlgvrvderdLSMHSGFKNELKELLgdgfsggglpRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEMIDDGGRGNVGACEACGDVRFVPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRcpdcnengltrcpiccf
Low Complexity Region (SEG)
HVHHPPQTKGDSYHVVALRSSTLGSLKLDFKNQSSLVdidldadhhqqhdddqKVSDNQCNGDLLDKFDKSKRKSEEFSTGLIRAKEWSNMIQEKIpkvvpktpvrtppGEPETINAWELMEGLEDVSPLRSPNHFRSFSFDFARGpsslldsdppMSKLCEDVSAERKTMSMWLQMANGDDHGDSESNSKPFALEFDPDVIKTFRKSFQELSPRHPFHLRPLENDKLPAALDSLDVKKSNGAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEMIDDGGRGNVGACEACGDVRFVPCETCSGSCKIYYekeeeveedseggwvgeeADFGFQRCPDCNENGLTRCPICCF
Disordered region (IsUnstruct)
**************VVAL*********************************************************************W*****************************W**********************************************************************************VIKTF**********************************SNGAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEMIDDGGRGNVGACEACGDVRFVPCETCSGSCKIYYEKE********GGWVGEEADFGFQRCPDCNENGLTRCPICC*
Disordered Region (DISOPRED)
*VHHPPQTKGDSYHVVALRSSTLGSLK**********************************************************************************************************************************************************************************************************************GAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKNELKELLG****GGGLPRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEMIDDGGRGNVGACEACGDVRFVPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLTRCPICCF
Disordered Region (DISEMBL)
***********SYHVVALRSSTLGSLKLDFKNQSSLVDIDLDAD***********SDNQCNGDLLDKFDKSKRKSEEFSTGLIRAKEWSNMIQEKIPKVVPKTPVRTPPGEPETINAWELMEGLEDVSPLRSPNHFRSFSFDFARGPSSLLDSDPPMSKLCEDVSAERKTMSMWLQMANG********NSKPFALEFDPDVIKTFRKSFQELSPRHPFHLRPLENDKLPAALDSLDVKKSNGAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEMIDDGGRGNVGACEACGDVRFVPCETCSGSCKIYYEK**********GWVGEEADFGFQRCPDCNENGLTRCPICCF
Disordered Region (DISPRO)
********KGDSYHVVALRSSTLGSLKLDFKN**************************************************************************TPPGEPETINAWELMEGL***********************************************************************EFDPDVIKTFRKSFQEL******************************AVLDHKCGKEKLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEMIDDGGRGNVGACEACGDVRFVPCETCSGSCKIYYEKE**************EADFGFQRCPDCNENGLTRCPICCF
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
HVHHPPQTKGDSYHVVALRSSTLGSLKLDFKNQSSLVDIDLDADHHQQHDDDQKVSDNQCNGDLLDKFDKSKRKSEEFSTGLIRAKEWSNMIQEKIPKVVPKTPVRTPPGEPETINAWELMEGLEDVSPLRSPNHFRSFSFDFARGPSSLLDSDPPMSKLCEDVSAERKTMSMWLQMANGDDHGDSESNSKPFALEFDPDVIKTFRKSFQELSPRHPFHLRPLENDKLPAALDSLDVKKSNGAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEMIDDGGRGNVGACEACGDVRFVPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLTRCPICCF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	423	2.2.26 [Sep-21-2011]
Q9FLE8	390	Uncharacterized protein A	yes	no	0.836	0.907	0.489	1e-99
Q9LH89	428	Uncharacterized protein A	no	no	0.903	0.892	0.483	5e-94
Q9W4S1	582	Glutaredoxin domain-conta	yes	no	0.352	0.256	0.307	7e-18
Q9VNL4	454	Glutaredoxin domain-conta	no	no	0.352	0.328	0.301	1e-17
A8MXD5	290	Glutaredoxin domain-conta	yes	no	0.359	0.524	0.317	5e-16
Q50H32	290	Glutaredoxin domain-conta	yes	no	0.359	0.524	0.311	1e-15

>sp|Q9FLE8|Y5986_ARATH Uncharacterized protein At5g39865 OS=Arabidopsis thaliana GN=At5g39865 PE=1 SV=1

 Score =  363 bits (933), Expect = e-99,   Method: Compositional matrix adjust.
 Identities = 209/427 (48%), Positives = 258/427 (60%), Gaps = 73/427 (17%)

Query: 1   HVHHPPQTKGDSYHVVALRSSTLGSLKLDFKNQSSLVDID--LDADHHQQHDDDQKVSDN 58
           HVHHP Q  GDSYH VAL SST+GSL L     SSL      L+   ++Q   DQ   + 
Sbjct: 31  HVHHPAQHTGDSYHTVALTSSTIGSLSL---CDSSLRHFHKHLEDSFYKQRVSDQMGEET 87

Query: 59  QCNGDLLDKFDKSKRKSEEFSTGLIRAKEWSNMIQEKIPKVVPKTPVRTPPGEPETINAW 118
             +G+     D+ K  + +    +I AK WS+ I EKIPK+V KTP+ TPPGEPETIN W
Sbjct: 88  LISGNGFLHGDEEKM-NLDLQAKVIEAKVWSSTINEKIPKIVAKTPIVTPPGEPETINTW 146

Query: 119 ELMEGLEDVSPLRSPNHFRSFSFDFARGPSSLLDSDPPMSKLCEDVSAERKTMSMWLQMA 178
           ELMEGLEDVSPLRSPNH RSFSFDF R                             +Q +
Sbjct: 147 ELMEGLEDVSPLRSPNHLRSFSFDFVR-----------------------------IQPS 177

Query: 179 NGDDHGDSESNSKPFALEFDPDVIKTFRKSFQELSPRHPFHLRPLENDKLPAALDSLDVK 238
           +  DH          A+ FD               P+  FH    EN K    +D LD  
Sbjct: 178 HDHDHD--------VAVSFD--------------LPKSRFH----ENVKSSCRVDDLDPP 211

Query: 239 KSNGAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKN 298
                      GKE++V+YFTSLRGIRKTYEDCC++R+ILK LG+R+DERD+SMHSGFK+
Sbjct: 212 DIVSRFKRKTLGKERVVLYFTSLRGIRKTYEDCCNIRIILKSLGIRIDERDVSMHSGFKD 271

Query: 299 ELKELLGDGFSGG---GLPRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEMIDDGGRGN 355
           ELK+LL   F+ G    LPRVF+G KY+GG EEI++++E G+LEK+++ CEM++DG  G 
Sbjct: 272 ELKKLLEGKFNNGVGITLPRVFLGNKYLGGVEEIKKLNENGELEKLIKDCEMVEDGSPGF 331

Query: 356 VGACEACGDVRFVPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGL 415
              CEACGDVRFVPCETCSGSCK+Y+E EEE E  +E         +GFQRCP CNENGL
Sbjct: 332 GNECEACGDVRFVPCETCSGSCKLYHEGEEEDEGVTE---------YGFQRCPYCNENGL 382

Query: 416 TRCPICC 422
            RC +CC
Sbjct: 383 IRCHVCC 389

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LH89|Y3885_ARATH Uncharacterized protein At3g28850 OS=Arabidopsis thaliana GN=At3g28850 PE=1 SV=1

 Score =  345 bits (884), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 211/436 (48%), Positives = 270/436 (61%), Gaps = 54/436 (12%)

Query: 2   VHHPPQTKGDSYHVVALRSSTLGSLKLDFKNQSSLVDIDLDADHHQQHDDDQKVSDNQC- 60
           VHH  Q   DS H+VAL SS+             L D     +H    D  +K+   +  
Sbjct: 31  VHHASQNSEDSCHMVALSSSS--------LGSLKLCDSSFGHNHKHLADFSEKLVSGESV 82

Query: 61  ---NG----DLLDKFDKSKRKSEEFSTGLIRAKEWSNMIQEKIPKVVPKTPVRTPPGEPE 113
              NG     + +K DK K  + E    L+ AK WS+M+ EKIPK+VPKTP+ TPPGEPE
Sbjct: 83  KTGNGFGPNVVREKSDKEK-SNLELQAKLMEAKVWSSMMNEKIPKIVPKTPIVTPPGEPE 141

Query: 114 TINAWELMEGLEDV-SPLRSPNHFRSFSFDFARGPSSLLDSDPPMSKLCEDVSAERKTMS 172
           TIN WE+M+GLEDV SPLRSPNH +SFSFD          S  P+               
Sbjct: 142 TINTWEMMDGLEDVLSPLRSPNHVKSFSFDVGPNGGKSNGSVKPV--------------- 186

Query: 173 MWLQMANGDDHGDSESNSKPFALEFDPDVIKTFRKSFQELSPRHPFHLRPLENDKLPAAL 232
            WLQM   ++  +             P++I +FRKS QEL   HPFH+   + +  P   
Sbjct: 187 -WLQMEEEEEGFEDFD----------PEIISSFRKSLQELPSDHPFHISNHDFELKP--- 232

Query: 233 DSLDVKKSNGAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSM 292
              +         +   GKE++++YFTSLRGIRKTYE+ C VRVILK LG+RVDERD+SM
Sbjct: 233 -RFNFSDEEKEEEEQSVGKERVILYFTSLRGIRKTYEESCDVRVILKSLGIRVDERDVSM 291

Query: 293 HSGFKNELKELLGDGFSGG---GLPRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEMID 349
           HSGFK+ELKELLG+ F+ G    LPRVF+G+KYIGGAEEIR+++E+G+LEK++ GCE ++
Sbjct: 292 HSGFKDELKELLGEKFNKGVGITLPRVFLGRKYIGGAEEIRKLNEDGKLEKLLGGCERVE 351

Query: 350 DGGRGNVGACEACGDVRFVPCETCSGSCKIYYEKEEEVEEDSEGGW---VGEEADFGFQR 406
           +   GN   CEACGDVRFVPCETCSGSCK+YYE E++ ++D EG     V EE ++GFQ 
Sbjct: 352 ENQNGNGLECEACGDVRFVPCETCSGSCKVYYEYEDDDDDDDEGDDDESVKEEREYGFQT 411

Query: 407 CPDCNENGLTRCPICC 422
           CPDCNENGL RCP+CC
Sbjct: 412 CPDCNENGLIRCPVCC 427

Arabidopsis thaliana (taxid: 3702)

>sp|Q9W4S1|GRCR2_DROME Glutaredoxin domain-containing cysteine-rich protein CG12206 OS=Drosophila melanogaster GN=CG12206 PE=2 SV=2

 Score = 92.0 bits (227), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 88/169 (52%), Gaps = 20/169 (11%)

Query: 253 KLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGG 312
           K+V+Y TS+  IR TY  C +V+ IL+ L ++ +ERD+ M   ++ E++E + D      
Sbjct: 434 KVVLYTTSMGIIRDTYAKCANVKKILRTLLIKFEERDIFMSVEYQQEMRERMQD--ETIR 491

Query: 313 LPRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEMIDDGGRGNVGACEACGDVRFVPCET 372
           +P++FV  + IG A  + R++E G+L +++   + I          C+ CG  R +PC  
Sbjct: 492 VPQLFVEGQLIGDANIVERLNESGELRQLLRPYKSI-----ATAYTCQTCGGYRMLPCPA 546

Query: 373 CSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLTRCPIC 421
           C+GS K  +                  A+F   +C +C+E GL +CP C
Sbjct: 547 CNGSKKSMHRNH-------------FTAEFVALKCMNCDEVGLIKCPNC 582

Drosophila melanogaster (taxid: 7227)

>sp|Q9VNL4|GRCR1_DROME Glutaredoxin domain-containing cysteine-rich protein CG31559 OS=Drosophila melanogaster GN=CG31559 PE=1 SV=2

 Score = 91.7 bits (226), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 93/169 (55%), Gaps = 20/169 (11%)

Query: 253 KLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGG 312
           K+V+Y TS+  IR+TY  C +V+ IL+ L V+ +ERD+ M   ++ E+++ +  G     
Sbjct: 306 KVVLYTTSMGIIRETYTKCANVKQILRTLLVKFEERDVFMSVEYQAEMRQRMQSGQV--R 363

Query: 313 LPRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEMIDDGGRGNVGACEACGDVRFVPCET 372
           +P+++V  ++IG AE + RM+E G+L ++++  + +      +   C+ CG  R +PC +
Sbjct: 364 VPQLYVEGQHIGDAETVERMNESGELRQLLKPYKSM-----ASTYTCQTCGGYRLLPCPS 418

Query: 373 CSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLTRCPIC 421
           C+GS K  +                  A+F   +C +C+E GL +C  C
Sbjct: 419 CNGSKKSVHRNH-------------FTAEFVALKCMNCDEVGLVKCHNC 454

Drosophila melanogaster (taxid: 7227)

>sp|A8MXD5|GRCR1_HUMAN Glutaredoxin domain-containing cysteine-rich protein 1 OS=Homo sapiens GN=GRXCR1 PE=1 SV=1

 Score = 85.9 bits (211), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 18/170 (10%)

Query: 252 EKLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGG 311
           +++V+Y T LR +R T+E C  VR I +   V+ +E++++++  +  EL E         
Sbjct: 137 DRVVIYTTCLRVVRTTFERCELVRKIFQNHRVKFEEKNIALNGEYGKELDERCRRVSEAP 196

Query: 312 GLPRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEMIDDGGRGNVGACEACGDVRFVPCE 371
            LP VF+   Y+GGAE+I  M+E G+L+ ++   E +      +   C +CG   F+PC 
Sbjct: 197 SLPVVFIDGHYLGGAEKILSMNESGELQDILTKIERVQ-----HPHECPSCGGFGFLPCS 251

Query: 372 TCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLTRCPIC 421
            C GS    +        DS          F   +C  CNENGL RC  C
Sbjct: 252 VCHGSKMSMFRN---CFTDS----------FKALKCTACNENGLQRCKNC 288

May play a role in actin filament architecture in developing stereocilia of sensory cells.

Homo sapiens (taxid: 9606)

>sp|Q50H32|GRCR1_MOUSE Glutaredoxin domain-containing cysteine-rich protein 1 OS=Mus musculus GN=Grxcr1 PE=1 SV=1

 Score = 84.7 bits (208), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 18/170 (10%)

Query: 252 EKLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGG 311
           +++V+Y T LR +R T+E C  VR I +   V+ +E++++++  +  EL E         
Sbjct: 137 DRVVIYTTCLRVVRTTFERCELVRKIFQNHRVKFEEKNIALNGDYGKELDERCRRVSEAP 196

Query: 312 GLPRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEMIDDGGRGNVGACEACGDVRFVPCE 371
            LP VF+   Y+GGAE+I  M+E G+L+ ++   E +      +   C +CG   F+PC 
Sbjct: 197 SLPVVFIDGHYLGGAEKILSMNESGELQDLLTKIERVQ-----HPHECPSCGGFGFLPCS 251

Query: 372 TCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLTRCPIC 421
            C GS    +        D+          F   +C  CNENGL RC  C
Sbjct: 252 VCHGSKMSVFRN---CFTDA----------FKALKCTACNENGLQRCKNC 288

May play a role in actin filament architecture in developing stereocilia of sensory cells.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	423
255552906	441	electron transporter, putative [Ricinus	0.940	0.902	0.595	1e-127
225452759	429	PREDICTED: uncharacterized protein At5g3	0.940	0.927	0.562	1e-124
356567038	448	PREDICTED: uncharacterized protein At5g3	0.924	0.872	0.552	1e-114
356529943	458	PREDICTED: uncharacterized protein At5g3	0.931	0.860	0.534	1e-109
357501775	433	hypothetical protein MTR_7g010090 [Medic	0.884	0.863	0.520	1e-105
449505871	393	PREDICTED: uncharacterized protein At3g2	0.853	0.918	0.517	1e-100
297801614	414	glutaredoxin family protein [Arabidopsis	0.851	0.869	0.489	1e-98
449461955	391	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.848	0.918	0.510	1e-98
22327469	390	glutaredoxin-like protein [Arabidopsis t	0.836	0.907	0.489	6e-98
224141375	383	hypothetical protein POPTRDRAFT_259048 [	0.822	0.908	0.501	4e-97

>gi|255552906|ref|XP_002517496.1| electron transporter, putative [Ricinus communis] gi|223543507|gb|EEF45038.1| electron transporter, putative [Ricinus communis]

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 261/438 (59%), Positives = 302/438 (68%), Gaps = 40/438 (9%)

Query: 1   HVHHPPQTKGDSYHVVALRSSTLGSLKLDFK-------NQSSLVDIDLDADHHQQHDDDQ 53
           HV HPPQ KGDSYHVVAL S+TLGSL LD         N ++ +DI   A+ +    D  
Sbjct: 29  HVVHPPQQKGDSYHVVALTSTTLGSLPLDSTSNCKDSININTAIDIFAAAEGNNDQGDTS 88

Query: 54  KVSDNQCNGDLLDKFDKSKRKSEEFSTGLIRAKEWSNMIQEKIPKVVPKTPVRTPPGEPE 113
                   G+     DK KR S+EFS GLI AK WSNMIQ+KIPK+VPKTP+RTPPGEPE
Sbjct: 89  DCDVRNGIGN-----DKEKR-SKEFSVGLIEAKTWSNMIQDKIPKIVPKTPIRTPPGEPE 142

Query: 114 TINAWELMEGLEDVSPLRSPNHFRSFSFDFARGPSSLLDSDPPMSKLCEDVSAERKTMSM 173
           TIN WELM GLE+   L  P+ +RSFSFD +R PS + DS     KL   + +  K    
Sbjct: 143 TINTWELMAGLEEDDSLSVPHRYRSFSFDVSRDPSPVQDS----PKLNPTLLSPNKNKPF 198

Query: 174 WLQMANGDDHGDSESNSKPFALEFDPDVIKTFRKSFQELSPRHPFHLRPLEN-DKLPAAL 232
           WLQ+A      D ++NSK    EFDP VI TFRKS QELSP HPF+L+  EN +K P + 
Sbjct: 199 WLQIA------DEDTNSK--CPEFDPQVISTFRKSLQELSPDHPFYLKSSENGEKQPPSS 250

Query: 233 DSLDVKKSNGAVLDH-KCGKEKLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLS 291
           D      SN    D+ K GKEKLVVYFTSLRG+RKTYEDCCHVRVILKGLGVRVDERD+S
Sbjct: 251 DP-----SNVVAKDYCKGGKEKLVVYFTSLRGVRKTYEDCCHVRVILKGLGVRVDERDVS 305

Query: 292 MHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEMIDDG 351
           MHSGFK ELKELLG+GF GGGLPRVF+G KY+GGAEEIRRMHEEGQLEKVVEGCEM++D 
Sbjct: 306 MHSGFKEELKELLGEGFCGGGLPRVFIGTKYLGGAEEIRRMHEEGQLEKVVEGCEMLEDD 365

Query: 352 GRGNVGACEACGDVRFVPCETCSGSCKIYYEKE------EEVEEDSEGGWVGEEADFGFQ 405
             G         DVRF+PCETC+GSCKIYYE+       E+ E  +      EE ++GFQ
Sbjct: 366 SGGGGCEGCG--DVRFIPCETCNGSCKIYYERHEEEEEEEDGEAAAAAEEELEEGEYGFQ 423

Query: 406 RCPDCNENGLTRCPICCF 423
           RCPDCNENGL RCPICC+
Sbjct: 424 RCPDCNENGLIRCPICCY 441

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225452759|ref|XP_002277734.1| PREDICTED: uncharacterized protein At5g39865-like isoform 1 [Vitis vinifera]

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 240/427 (56%), Positives = 290/427 (67%), Gaps = 29/427 (6%)

Query: 1   HVHHPPQTKGDSYHVVALRSSTLGSLKLDFKNQSSLVDIDLDADHHQQHDDDQKVSDNQC 60
           HVHHPPQ+KGDSYHVVAL S+TLG+LKLD  +Q+    ++      ++ D + KV+ N+ 
Sbjct: 28  HVHHPPQSKGDSYHVVALTSTTLGTLKLDTSHQNRNSHVN-GTIVEEEEDKENKVNGNE- 85

Query: 61  NGDLLDKFDKSKRKSEEFSTGLIRAKEWSNMIQEKIPKVVPKTPVRTPPGEPETINAWEL 120
                       +K++ FS GLI AK WS+MI EKIPK+ PKTP+RTPPGEPETINAWEL
Sbjct: 86  ------NVKAGDKKNKGFSMGLIEAKTWSSMINEKIPKIAPKTPIRTPPGEPETINAWEL 139

Query: 121 MEGLEDVSPLRSPNHFRSFSFDFAR----GPSSLLDSDPPMSKLCEDVSAERKTMSMWLQ 176
           MEGLED SPLRSPNH RSFSFD  R     P  L     P S+  E+   E     MWL 
Sbjct: 140 MEGLEDASPLRSPNHLRSFSFDIDRRSIPAPFEL-----PKSRFQEN--GEASPRPMWLN 192

Query: 177 MANGDDHGDSESNSKPFALEFDPDVIKTFRKSFQELSPRHPFHLRPLENDKLPAALDSLD 236
           +   D   +  SNSK    EFDP+VI  FRKS QEL    PFH++  E  +    +D+  
Sbjct: 193 LV--DSEMNPNSNSKTAVPEFDPEVISVFRKSLQELPSDDPFHIKDDEKVQAREVMDAKK 250

Query: 237 VKKSNGAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGF 296
           V             K+ +VVYFTSLRG+RKTYEDCCHVRVILK LG+R+DERD+SMHSGF
Sbjct: 251 VNDDEKVQARESFAKDTVVVYFTSLRGVRKTYEDCCHVRVILKSLGIRLDERDVSMHSGF 310

Query: 297 KNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEMIDDGGRGNV 356
           K ELK+LLGD F+ G LPRVF+G++YIGGAE++RRMHEEGQLEK +E  E  + GG    
Sbjct: 311 KEELKDLLGDAFNSGSLPRVFLGRRYIGGAEDVRRMHEEGQLEKTLEDSEKTEAGGNSGS 370

Query: 357 GACEACGDVRFVPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLT 416
             CEACGD+RFVPCETCSGSCKIYYE +EE +++          +FGFQRCPDCNENGL 
Sbjct: 371 RTCEACGDIRFVPCETCSGSCKIYYEGDEEDDDEE--------GEFGFQRCPDCNENGLI 422

Query: 417 RCPICCF 423
           RCPICC+
Sbjct: 423 RCPICCY 429

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356567038|ref|XP_003551730.1| PREDICTED: uncharacterized protein At5g39865-like [Glycine max]

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 249/451 (55%), Positives = 292/451 (64%), Gaps = 60/451 (13%)

Query: 1   HVHHPPQTKGDSYHVVALRSSTLGSLKLDFKNQSSLVDIDLDADHHQQHDDDQKVSDNQC 60
           HVHHPP  +GDSYHVVAL S+TLG+LKL   N  +      + DH      D K+S+ + 
Sbjct: 28  HVHHPPLAEGDSYHVVALTSTTLGTLKL---NSPAPTQNFANCDH------DFKLSNGKV 78

Query: 61  NGDLLDKFDKSK-------------------RKSEEFSTGLIRAKEWSNMIQEKIPKVVP 101
                 +FD                       K EEFS GLI AK WSNMI++K+PKV P
Sbjct: 79  GNAESFRFDSESFVQRLEEKEKEKKSEVLEKDKKEEFSMGLIEAKTWSNMIEQKLPKVFP 138

Query: 102 KTPVRTPPGEPETINAWELMEGLEDVS-PLRSPNHFRSFSFDFARGPSSLLDSDPPMSKL 160
           KTP+RTPPGEPETIN WELMEGLED + P RSP+HFRSFSFDF  G       D  MS  
Sbjct: 139 KTPIRTPPGEPETINTWELMEGLEDTTTPFRSPSHFRSFSFDFNGG------DDVGMS-- 190

Query: 161 CEDVSAERKTMSMWLQMANGDDHGDSESNSKPFALEFDPDVIKTFRKSFQELSPRHPFHL 220
              V A  K   MWL M       + ES   P   +FDP+VI +FRKS Q+LSP  PFHL
Sbjct: 191 ---VVASPK--PMWLLMT------EEESRLNPEISDFDPEVISSFRKSLQQLSPDSPFHL 239

Query: 221 RPL----ENDKLPAALDSL---DVKKSNGAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCH 273
           +P     E DK      S    +    +   +D  CGK+K+V+YFTSLRG+RKTYE CC 
Sbjct: 240 QPAPPGDEEDKHGTKKGSPFEENEFVVDDVKVDDPCGKDKVVLYFTSLRGVRKTYEACCQ 299

Query: 274 VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRMH 333
           VR+ILKGLGVRVDERD+SMHSGFK ELKELLGDG+   GLPRVF+G  YIGGAEEI+R+H
Sbjct: 300 VRMILKGLGVRVDERDVSMHSGFKEELKELLGDGYGSLGLPRVFLGGNYIGGAEEIQRLH 359

Query: 334 EEGQLEKVVEGCEMIDDG--GRGNVGACEACGDVRFVPCETCSGSCKIYYEKEEEVEEDS 391
           E+G+LEK++  CE I+D   G G  G CEACGD+RFVPCETC GSCKIYY  +EE EE+ 
Sbjct: 360 EDGKLEKLLVCCEKIEDSVGGDGGGGVCEACGDIRFVPCETCCGSCKIYYTGDEEDEEEY 419

Query: 392 EGGWVGEEADFGFQRCPDCNENGLTRCPICC 422
             G VGE    GFQRCPDCNENGL RCP+CC
Sbjct: 420 VDGEVGE---CGFQRCPDCNENGLIRCPMCC 447

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356529943|ref|XP_003533545.1| PREDICTED: uncharacterized protein At5g39865-like [Glycine max]

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 245/458 (53%), Positives = 294/458 (64%), Gaps = 64/458 (13%)

Query: 1   HVHHPPQTKGDSYHVVALRSSTLGSLKLDFKNQSSLVDIDLDADHHQQHDDDQKVSDNQC 60
           HVHHPP  +GDSYHVVAL S+TLG+LKL+  + +   +   + +H      D K+S+ + 
Sbjct: 28  HVHHPPLAEGDSYHVVALTSTTLGTLKLN--SPAPTQNFSGNCNH------DFKLSNGKL 79

Query: 61  NGDLLDKFDKSK------------------RKSEEFSTGLIRAKEWSNMIQEKIPKVVPK 102
                 +FD                      K EEFS GLI AK WSNMI++K+PKV PK
Sbjct: 80  GNAESFRFDSESFVQRLEEEKEKKSEVLEKDKKEEFSMGLIEAKTWSNMIEQKLPKVFPK 139

Query: 103 TPVRTPPGEPETINAWELMEGLEDVSPLRSPNHFRSFSFDF-----ARGPSSLLDSDPPM 157
           TP+RTPPGEPETIN WELMEGLED +P RSP HFRSFSFDF            +D DPP 
Sbjct: 140 TPIRTPPGEPETINTWELMEGLEDTTPFRSPIHFRSFSFDFNGGDDVGDGDLDVDVDPP- 198

Query: 158 SKLCEDVSAERKTMSMWLQMANGDDHGDSESNSKPFALEFDPDVIKTFRKSFQELSPRHP 217
                 +S       MWL M       + ES   P   +FDP+VI  FRKS Q+LSP  P
Sbjct: 199 -----KMSVVASPKPMWLLMT------EEESRLNPAISDFDPEVISAFRKSLQQLSPDSP 247

Query: 218 FHLRPLENDKLPAALDSLDVKKSNG----------AVLDHKCGKEKLVVYFTSLRGIRKT 267
           FHLRP   D+     D    KK +             +D  CGK+KL++YFTSLRG+RKT
Sbjct: 248 FHLRPEPGDQ-----DKQGTKKGSSFEENDFVVDDVKVDDPCGKDKLLLYFTSLRGVRKT 302

Query: 268 YEDCCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAE 327
           YEDCC VR+ILKGLG+RVDERD+SMHSGFK ELKELLGDG  G GLPRVF+G  YIGGAE
Sbjct: 303 YEDCCQVRMILKGLGIRVDERDVSMHSGFKEELKELLGDGHGGLGLPRVFLGGNYIGGAE 362

Query: 328 EIRRMHEEGQLEKVVEGCEMIDDG--GRGNVGACEACGDVRFVPCETCSGSCKIYYEKEE 385
           EI+R+HE+G+LEK++  CE I+D   G G  G CEACGD+RFVPCETC GSCKIYYE +E
Sbjct: 363 EIQRLHEDGKLEKLLGCCEKIEDSVGGDGVGGVCEACGDIRFVPCETCCGSCKIYYEGDE 422

Query: 386 EVEEDSEGGWV-GEEADFGFQRCPDCNENGLTRCPICC 422
           +  E+    +V GE  + GFQRCPDCNENGL RCP+CC
Sbjct: 423 DENEEE---YVDGEVGECGFQRCPDCNENGLIRCPMCC 457

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357501775|ref|XP_003621176.1| hypothetical protein MTR_7g010090 [Medicago truncatula] gi|87240364|gb|ABD32222.1| Thioredoxin fold [Medicago truncatula] gi|355496191|gb|AES77394.1| hypothetical protein MTR_7g010090 [Medicago truncatula]

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 237/455 (52%), Positives = 289/455 (63%), Gaps = 81/455 (17%)

Query: 1   HVHHPPQTKGDSYHVVALRSSTLGSLK-LDFKNQSSLVDIDLDADHHQQHDDDQKVSDNQ 59
           HVHHPPQ+  DSYHVVAL S+TLG+LK L+  + +  +   ++  H  +           
Sbjct: 28  HVHHPPQSDEDSYHVVALTSTTLGTLKPLNSSSSNQKIVPSVNGVHDFKF---------- 77

Query: 60  CNGDLLD----KFDK--------------------------SKRKSEEFSTGLIRAKEWS 89
           CNG + +    +FD+                          S  K +EFS GLI AK WS
Sbjct: 78  CNGKVKESESFRFDRESLMQKLKKEKENERREKEKKEEALESDEKVKEFSMGLIEAKTWS 137

Query: 90  NMIQEKIPKVVPKTPVRTPPGEPETINAWELMEGLEDVSPLRSPNHFRSFSFDFARGPSS 149
           NMI+EK+ KVVPKTP RTPPGEPETIN WELMEGLED+SP RSPNHF+SFSFD   G   
Sbjct: 138 NMIEEKLTKVVPKTPTRTPPGEPETINTWELMEGLEDISPFRSPNHFKSFSFDVNGGGEG 197

Query: 150 LLDSDPPMSKLCEDVSAERKTMSMWLQMANGDDHGDSESNSKPFALEFDPDVIKTFRKSF 209
           +   DPP                MWLQ+        +E  SK   ++FDP+VI +FRKS 
Sbjct: 198 V---DPPKP--------------MWLQI--------TEEESKLNQVDFDPEVISSFRKSL 232

Query: 210 QELSPRHPFHLRPLENDKLPAALDS-LDVKKSNGAVLDHKCGKEKLVVYFTSLRGIRKTY 268
           QE S   PF+L+    D+     D  +DVK           GKEK+V YFTSLRG+RKTY
Sbjct: 233 QEQSQDSPFYLKQTSIDEEEMKDDVFVDVKIG---------GKEKVVFYFTSLRGVRKTY 283

Query: 269 EDCCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEE 328
           EDCC VR+IL+GLGVRVDERD+SMH GFK EL+ELLGD + GGGLPRVFVGK YIGG EE
Sbjct: 284 EDCCQVRMILRGLGVRVDERDVSMHLGFKEELRELLGDLYGGGGLPRVFVGKNYIGGVEE 343

Query: 329 IRRMHEEGQLEKVVEGCEMIDDGGRGNVGACEACGDVRFVPCETCSGSCKIYYEKEEEVE 388
           I ++HE+G+LEK++E CE I+D    + G CE CGD+RFVPCETC GSCKIYYE  ++ E
Sbjct: 344 IEKLHEDGKLEKLLECCEKIED----SCGGCENCGDIRFVPCETCFGSCKIYYEDGDDDE 399

Query: 389 EDSEGGWVGEEADFGFQRCPDCNENGLTRCPICCF 423
           E+ +     EE  FGFQRCPDCNENGL RCP+CC+
Sbjct: 400 EEYDDHG-REEGKFGFQRCPDCNENGLIRCPVCCY 433

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449505871|ref|XP_004162591.1| PREDICTED: uncharacterized protein At3g28850-like [Cucumis sativus]

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 221/427 (51%), Positives = 270/427 (63%), Gaps = 66/427 (15%)

Query: 1   HVHHPPQTKGDSYHVVALRSSTLGSLKLDFKNQSSLVDIDLDADHHQQHDDDQKVSDNQC 60
           H H  P    D YH+VA  SS LGSLKL+        +I  D   +   D D+  S N  
Sbjct: 27  HAHRSPPRHSDGYHLVAFSSSNLGSLKLE--------NIHFDNKIYTVDDVDESQSKN-- 76

Query: 61  NGDLLDKFDKSKRKSEEFSTGLIRAKEWSNMIQEKIPKVVPKTPVRTPPGEPETINAWEL 120
                           E S  LI AK WSN+I ++IPK+ PKTP+ TPPGEPETIN WE+
Sbjct: 77  ----------------EASMALIEAKTWSNLINDRIPKIAPKTPIMTPPGEPETINVWEV 120

Query: 121 MEGLEDVSPLRSPNHFRSFSFDFARGPSSLLDSDPPMSKLCEDVSAERKTMSMWLQMANG 180
           MEGL+D+SP R     RSFSFD +  P            +C+  S+E+         +N 
Sbjct: 121 MEGLDDISPFRPTCRPRSFSFDVSAIP------------VCD--SSEQGN-------SNL 159

Query: 181 DDHGDSESNSKPFAL---EFDPDVIKTFRKSFQELSPRHPFHLRPLENDKLPAALDSLDV 237
            +  DS ++SKPF L   E DP+VI +F KSF+     +PF L+PLE        D   V
Sbjct: 160 KEVNDSSTSSKPFWLQPSELDPEVISSFSKSFE-----NPFDLQPLE--------DESPV 206

Query: 238 KKSNGAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFK 297
           +K  G   + K  ++K+VVYFTSLRG+RKTYEDCC VR+ILK +G RVDERD+SM SGFK
Sbjct: 207 EKLAGNTTEGK-NRDKIVVYFTSLRGVRKTYEDCCEVRMILKSMGARVDERDVSMDSGFK 265

Query: 298 NELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEMI--DDGGRGN 355
            ELKELLG+G + GGLPRVF GKKYIGGAEEI+R+HE+G+LEK++EGCE    +  G   
Sbjct: 266 QELKELLGEGMNRGGLPRVFAGKKYIGGAEEIKRLHEDGELEKILEGCERAAEEGVGGDG 325

Query: 356 VGACEACGDVRFVPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGL 415
            G+CE CGDVRFVPCE CSGSCKIYYE+EEE EE+ E     EE + GFQRCPDCNENGL
Sbjct: 326 GGSCECCGDVRFVPCERCSGSCKIYYEEEEEREEEDEKEEEEEEEEGGFQRCPDCNENGL 385

Query: 416 TRCPICC 422
            RCPICC
Sbjct: 386 IRCPICC 392

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297801614|ref|XP_002868691.1| glutaredoxin family protein [Arabidopsis lyrata subsp. lyrata] gi|297314527|gb|EFH44950.1| glutaredoxin family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  366 bits (940), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 218/445 (48%), Positives = 269/445 (60%), Gaps = 85/445 (19%)

Query: 1   HVHHPPQTKGDSYHVVALRSSTLGSLKLDFKNQSSLVDIDLDADHHQQHDDD----QKVS 56
           HVHHP Q  GDSYH VAL SST+GSL L           D    H  +H +D    Q+VS
Sbjct: 31  HVHHPAQHTGDSYHTVALTSSTIGSLSL----------CDSSLRHFHKHLEDSIYKQRVS 80

Query: 57  DNQC-------NG--------DLLDKFDKSKRKSEEFSTGLIRAKEWSNMIQEKIPKVVP 101
           D          NG        D++   +  ++ + +    +I A+ WS+MI EKIPK+VP
Sbjct: 81  DQMGEEKLISGNGFLHGDEENDIIKVREFREKMNLDLQAKVIEARVWSSMINEKIPKIVP 140

Query: 102 KTPVRTPPGEPETINAWELMEGLEDVSPLRSPNHFRSFSFDFAR-GPSSLLDSDPPMSKL 160
           KTP+ TPPGEPETIN WELMEGLEDVSPLRSPNH RSFSFD  R  P+   D D  +S  
Sbjct: 141 KTPIVTPPGEPETINTWELMEGLEDVSPLRSPNHLRSFSFDVVRIQPNHDDDVDVDVS-- 198

Query: 161 CEDVSAERKTMSMWLQMANGDDHGDSESNSKPFALEFDPDVIKTFRKSFQELSPRHPFHL 220
                            A    H + +SNS+   LE  P+++ TF KS QE         
Sbjct: 199 --------------FDRAKSRFHENVKSNSRVDDLE-PPEIVSTFTKSLQE--------- 234

Query: 221 RPLENDKLPAALDSLDVKKSNGAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCHVRVILKG 280
                                G       GKEK+ +YFTSLRGIRKTYEDCC++R+ILK 
Sbjct: 235 --------------------KGNCKRKSLGKEKVRLYFTSLRGIRKTYEDCCNIRIILKS 274

Query: 281 LGVRVDERDLSMHSGFKNELKELLGDGFSGG---GLPRVFVGKKYIGGAEEIRRMHEEGQ 337
           LG+R+DERD+S+HSGFK+ELK+LL D F+ G    LPRVF+G KY+GG EEI++++E G 
Sbjct: 275 LGIRIDERDVSLHSGFKDELKKLLEDKFNNGVGITLPRVFLGNKYLGGVEEIKKLNENGT 334

Query: 338 LEKVVEGCEMIDDGGRGNVGACEACGDVRFVPCETCSGSCKIYYEKEEEVEEDSEGGWVG 397
           LEK+++ CEM++DG  G    CEACGDVRFVPCETCSGSCKIY+E EEE EE+       
Sbjct: 335 LEKLIKDCEMVEDGLTGFGNECEACGDVRFVPCETCSGSCKIYHEGEEEEEEEE------ 388

Query: 398 EEADFGFQRCPDCNENGLTRCPICC 422
           E  D+GFQRCP CNENGL RCP+CC
Sbjct: 389 EVTDYGFQRCPYCNENGLIRCPVCC 413

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449461955|ref|XP_004148707.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein At3g28850-like [Cucumis sativus]

 Score =  366 bits (940), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 218/427 (51%), Positives = 266/427 (62%), Gaps = 68/427 (15%)

Query: 1   HVHHPPQTKGDSYHVVALRSSTLGSLKLDFKNQSSLVDIDLDADHHQQHDDDQKVSDNQC 60
           H H  P    D YH+VA  SS LGSLKL+        +I  D   +   D D+  S N  
Sbjct: 27  HAHRSPPRHSDGYHLVAFSSSNLGSLKLE--------NIHFDNKIYTVDDVDESQSKN-- 76

Query: 61  NGDLLDKFDKSKRKSEEFSTGLIRAKEWSNMIQEKIPKVVPKTPVRTPPGEPETINAWEL 120
                           E S  LI AK WSN+I ++IPK+ PKTP+ TPPGEPETIN WE+
Sbjct: 77  ----------------EASMALIEAKTWSNLINDRIPKIAPKTPIMTPPGEPETINVWEV 120

Query: 121 MEGLEDVSPLRSPNHFRSFSFDFARGPSSLLDSDPPMSKLCEDVSAERKTMSMWLQMANG 180
           MEGL+D+SP R     RSFSFD +  P            +C+  S+E+         +N 
Sbjct: 121 MEGLDDISPFRPTCRPRSFSFDVSAIP------------VCD--SSEQGN-------SNL 159

Query: 181 DDHGDSESNSKPFAL---EFDPDVIKTFRKSFQELSPRHPFHLRPLENDKLPAALDSLDV 237
            +   S ++SKPF L   E DP+VI +F KSF+     +PF LRPLE        D   V
Sbjct: 160 KEVNHSSTSSKPFWLQPSELDPEVISSFSKSFE-----NPFDLRPLE--------DESPV 206

Query: 238 KKSNGAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFK 297
           +K  G   + K  ++K+VVYFTSLRG+RKTYEDCC VR+ILK +G RVDERD+SM SGFK
Sbjct: 207 EKLAGNTTEGK-NRDKIVVYFTSLRGVRKTYEDCCEVRMILKSMGARVDERDVSMDSGFK 265

Query: 298 NELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEMI--DDGGRGN 355
            ELKELLG+G + GGLPRVF GKKYIGGAEEI+R+HE+G+LEK++EGCE    +  G   
Sbjct: 266 QELKELLGEGMNRGGLPRVFAGKKYIGGAEEIKRLHEDGELEKILEGCERAAEEGVGGDG 325

Query: 356 VGACEACGDVRFVPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGL 415
            G+CE CGDVRFVPCE CSGSCKIYYE+EEE  +  +     EE   GFQRCPDCNENGL
Sbjct: 326 GGSCECCGDVRFVPCERCSGSCKIYYEEEEEERKKMKKEEEEEEG--GFQRCPDCNENGL 383

Query: 416 TRCPICC 422
            RCPICC
Sbjct: 384 IRCPICC 390

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22327469|ref|NP_680368.1| glutaredoxin-like protein [Arabidopsis thaliana] gi|75171457|sp|Q9FLE8.1|Y5986_ARATH RecName: Full=Uncharacterized protein At5g39865 gi|10176979|dbj|BAB10211.1| unnamed protein product [Arabidopsis thaliana] gi|19347749|gb|AAL86299.1| unknown protein [Arabidopsis thaliana] gi|22136720|gb|AAM91679.1| unknown protein [Arabidopsis thaliana] gi|332007102|gb|AED94485.1| glutaredoxin-like protein [Arabidopsis thaliana]

 Score =  363 bits (933), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 209/427 (48%), Positives = 258/427 (60%), Gaps = 73/427 (17%)

Query: 1   HVHHPPQTKGDSYHVVALRSSTLGSLKLDFKNQSSLVDID--LDADHHQQHDDDQKVSDN 58
           HVHHP Q  GDSYH VAL SST+GSL L     SSL      L+   ++Q   DQ   + 
Sbjct: 31  HVHHPAQHTGDSYHTVALTSSTIGSLSL---CDSSLRHFHKHLEDSFYKQRVSDQMGEET 87

Query: 59  QCNGDLLDKFDKSKRKSEEFSTGLIRAKEWSNMIQEKIPKVVPKTPVRTPPGEPETINAW 118
             +G+     D+ K  + +    +I AK WS+ I EKIPK+V KTP+ TPPGEPETIN W
Sbjct: 88  LISGNGFLHGDEEKM-NLDLQAKVIEAKVWSSTINEKIPKIVAKTPIVTPPGEPETINTW 146

Query: 119 ELMEGLEDVSPLRSPNHFRSFSFDFARGPSSLLDSDPPMSKLCEDVSAERKTMSMWLQMA 178
           ELMEGLEDVSPLRSPNH RSFSFDF R                             +Q +
Sbjct: 147 ELMEGLEDVSPLRSPNHLRSFSFDFVR-----------------------------IQPS 177

Query: 179 NGDDHGDSESNSKPFALEFDPDVIKTFRKSFQELSPRHPFHLRPLENDKLPAALDSLDVK 238
           +  DH          A+ FD               P+  FH    EN K    +D LD  
Sbjct: 178 HDHDHD--------VAVSFD--------------LPKSRFH----ENVKSSCRVDDLDPP 211

Query: 239 KSNGAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKN 298
                      GKE++V+YFTSLRGIRKTYEDCC++R+ILK LG+R+DERD+SMHSGFK+
Sbjct: 212 DIVSRFKRKTLGKERVVLYFTSLRGIRKTYEDCCNIRIILKSLGIRIDERDVSMHSGFKD 271

Query: 299 ELKELLGDGFSGG---GLPRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEMIDDGGRGN 355
           ELK+LL   F+ G    LPRVF+G KY+GG EEI++++E G+LEK+++ CEM++DG  G 
Sbjct: 272 ELKKLLEGKFNNGVGITLPRVFLGNKYLGGVEEIKKLNENGELEKLIKDCEMVEDGSPGF 331

Query: 356 VGACEACGDVRFVPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGL 415
              CEACGDVRFVPCETCSGSCK+Y+E EEE E  +E         +GFQRCP CNENGL
Sbjct: 332 GNECEACGDVRFVPCETCSGSCKLYHEGEEEDEGVTE---------YGFQRCPYCNENGL 382

Query: 416 TRCPICC 422
            RC +CC
Sbjct: 383 IRCHVCC 389

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224141375|ref|XP_002324048.1| hypothetical protein POPTRDRAFT_259048 [Populus trichocarpa] gi|222867050|gb|EEF04181.1| hypothetical protein POPTRDRAFT_259048 [Populus trichocarpa]

 Score =  361 bits (926), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 215/429 (50%), Positives = 264/429 (61%), Gaps = 81/429 (18%)

Query: 1   HVHHPPQTKGDSYHVVALRSSTLGSLKLDFKNQSSLVDIDLDADHHQQHDDDQKVSDNQC 60
           HV HPPQ KGDSYHVVAL S+TLG+L LD  NQ+  +D+ +  D   ++  D     N  
Sbjct: 28  HVVHPPQQKGDSYHVVALTSTTLGTLALDSANQNGTIDVIVKGDDQWKNVGDV----NGS 83

Query: 61  NGDLLDKFDKSKRKSEEFSTGLIRAKEWSNMIQEKIPKVVPKTPVRTPPGEPETINAWEL 120
           NG  L K  K     EEFSTGLI A+ WSNMIQEKIPKVVP+TP+ T             
Sbjct: 84  NG--LVKKSKELNSKEEFSTGLIEARTWSNMIQEKIPKVVPRTPIMT------------- 128

Query: 121 MEGLEDVSPLRSPNHFRSFSFDFARGPSSLLDSDPPMSKLCEDVSAERKTMSMWLQMANG 180
                                             PP          E +T++ W  MA  
Sbjct: 129 ----------------------------------PP---------GEPETINTWELMAGL 145

Query: 181 DDHGDSESNSKPFALEFDPDVIKTFRKSFQELSPRHPFHLRPLENDKLP------AALDS 234
           +D  +  S+ +  +  FD            +LSP HPF+++P+++++ P      ++L  
Sbjct: 146 EDVMNPCSSHRFRSFSFD----------ISQLSPTHPFYIKPIDSERQPPFDSDDSSLPV 195

Query: 235 LDVKKSNGAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHS 294
            D  + +    D K  K+KL+VYFTSLRG+RKTYE CCHVRVILK LGVRVDERD+SMHS
Sbjct: 196 NDATEVDFVAKDCKRSKDKLIVYFTSLRGVRKTYEACCHVRVILKSLGVRVDERDVSMHS 255

Query: 295 GFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEMID-DGGR 353
           GFK EL+EL+ +GFSGGGLPRVF+G+KYIGGAEEIRRMHEEG LEK+VEGCEM+D  GG 
Sbjct: 256 GFKEELRELMKEGFSGGGLPRVFIGRKYIGGAEEIRRMHEEGLLEKMVEGCEMLDGGGGG 315

Query: 354 GNVGACEACGDVRFVPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNEN 413
           G  GACEACGD+RFVPCETCSGSCKIY E ++E  E+ E     E  ++GFQRCPDCNEN
Sbjct: 316 GVGGACEACGDIRFVPCETCSGSCKIYCEGDDEELEELEE--SEESNEYGFQRCPDCNEN 373

Query: 414 GLTRCPICC 422
           GL RCP CC
Sbjct: 374 GLIRCPSCC 382

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	423
TAIR|locus:2098408	428	AT3G28850 [Arabidopsis thalian	0.557	0.551	0.535	5.5e-92
TAIR|locus:504954828	390	AT5G39865 [Arabidopsis thalian	0.569	0.617	0.484	9.1e-88
TAIR|locus:2080635	417	AT3G57070 [Arabidopsis thalian	0.437	0.443	0.371	1.6e-53
TAIR|locus:2040267	402	AT2G41330 [Arabidopsis thalian	0.439	0.462	0.376	6.4e-51
TAIR|locus:2150640	384	AT5G03870 [Arabidopsis thalian	0.420	0.463	0.348	4.8e-43
TAIR|locus:2139252	334	AT4G10630 [Arabidopsis thalian	0.439	0.556	0.370	8.6e-37
TAIR|locus:2171223	273	AT5G58530 [Arabidopsis thalian	0.295	0.457	0.467	6.2e-33
TAIR|locus:2035589	314	AT1G32760 [Arabidopsis thalian	0.359	0.484	0.418	1.6e-32
TAIR|locus:2019479	368	AT1G64500 [Arabidopsis thalian	0.373	0.429	0.440	2.9e-32
TAIR|locus:2159038	274	AT5G13810 [Arabidopsis thalian	0.373	0.576	0.397	8.2e-28

TAIR|locus:2098408 AT3G28850 [Arabidopsis thaliana (taxid:3702)]

 Score = 688 (247.2 bits), Expect = 5.5e-92, Sum P(2) = 5.5e-92
 Identities = 137/256 (53%), Positives = 175/256 (68%)

Query:   173 MWLQMANGDDHGDSESNSKPFALEFDPDVIKTFRKSFQELSPRHPFHLRPLENDKLPAAL 232
             +WLQM         E   + F  +FDP++I +FRKS QEL   HPFH+   + +  P   
Sbjct:   186 VWLQM---------EEEEEGFE-DFDPEIISSFRKSLQELPSDHPFHISNHDFELKPRFN 235

Query:   233 DSLDVKKSNGAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSM 292
              S + K+      +   GKE++++YFTSLRGIRKTYE+ C VRVILK LG+RVDERD+SM
Sbjct:   236 FSDEEKEEE----EQSVGKERVILYFTSLRGIRKTYEESCDVRVILKSLGIRVDERDVSM 291

Query:   293 HSGFKNELKELLGDGFSGG-G--LPRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEMID 349
             HSGFK+ELKELLG+ F+ G G  LPRVF+G+KYIGGAEEIR+++E+G+LEK++ GCE ++
Sbjct:   292 HSGFKDELKELLGEKFNKGVGITLPRVFLGRKYIGGAEEIRKLNEDGKLEKLLGGCERVE 351

Query:   350 DGGRGNVGACEACGDVRFVPCETCSGSCKIYYXXXXXXXXXXXXXXXXXXAD---FGFQR 406
             +   GN   CEACGDVRFVPCETCSGSCK+YY                   +   +GFQ 
Sbjct:   352 ENQNGNGLECEACGDVRFVPCETCSGSCKVYYEYEDDDDDDDEGDDDESVKEEREYGFQT 411

Query:   407 CPDCNENGLTRCPICC 422
             CPDCNENGL RCP+CC
Sbjct:   412 CPDCNENGLIRCPVCC 427

GO:0005634 "nucleus" evidence=ISM

GO:0009055 "electron carrier activity" evidence=IEA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=IEA

GO:0045454 "cell redox homeostasis" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0048653 "anther development" evidence=RCA

TAIR|locus:504954828 AT5G39865 [Arabidopsis thaliana (taxid:3702)]

 Score = 607 (218.7 bits), Expect = 9.1e-88, Sum P(2) = 9.1e-88
 Identities = 129/266 (48%), Positives = 170/266 (63%)

Query:   167 ERKTMSMWLQMANGDDHGD--SESNSKPFALEF---DP--DVIKTFRKSFQELSPRHPFH 219
             E +T++ W  M   +D     S ++ + F+ +F    P  D       SF +L P+  FH
Sbjct:   139 EPETINTWELMEGLEDVSPLRSPNHLRSFSFDFVRIQPSHDHDHDVAVSF-DL-PKSRFH 196

Query:   220 LRPLENDKLPAALDSLDVKKSNGAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCHVRVILK 279
                 EN K    +D LD             GKE++V+YFTSLRGIRKTYEDCC++R+ILK
Sbjct:   197 ----ENVKSSCRVDDLDPPDIVSRFKRKTLGKERVVLYFTSLRGIRKTYEDCCNIRIILK 252

Query:   280 GLGVRVDERDLSMHSGFKNELKELLGDGFSGG-G--LPRVFVGKKYIGGAEEIRRMHEEG 336
              LG+R+DERD+SMHSGFK+ELK+LL   F+ G G  LPRVF+G KY+GG EEI++++E G
Sbjct:   253 SLGIRIDERDVSMHSGFKDELKKLLEGKFNNGVGITLPRVFLGNKYLGGVEEIKKLNENG 312

Query:   337 QLEKVVEGCEMIDDGGRGNVGACEACGDVRFVPCETCSGSCKIYYXXXXXXXXXXXXXXX 396
             +LEK+++ CEM++DG  G    CEACGDVRFVPCETCSGSCK+Y+               
Sbjct:   313 ELEKLIKDCEMVEDGSPGFGNECEACGDVRFVPCETCSGSCKLYHEGEEEDEGVT----- 367

Query:   397 XXXADFGFQRCPDCNENGLTRCPICC 422
                 ++GFQRCP CNENGL RC +CC
Sbjct:   368 ----EYGFQRCPYCNENGLIRCHVCC 389

GO:0005634 "nucleus" evidence=ISM

GO:0009055 "electron carrier activity" evidence=IEA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=IEA

GO:0045454 "cell redox homeostasis" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2080635 AT3G57070 [Arabidopsis thaliana (taxid:3702)]

 Score = 331 (121.6 bits), Expect = 1.6e-53, Sum P(4) = 1.6e-53
 Identities = 78/210 (37%), Positives = 122/210 (58%)

Query:   189 NSKPFALEFDPDVIKTFRKSFQE--LS----PRHPFHLRPLEN-----DKLPAALDSLDV 237
             + + F  + DP ++ +++K+     LS     R+P H RP ++        P+ L S + 
Sbjct:   189 SEESFLSDLDPSIVSSYKKALSSKLLSNHSNTRNP-H-RPTKSLSCSPSSNPSILISEEP 246

Query:   238 KKSNGAVLDHKCGK-------EKLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDL 290
             K  + + L     K       +K+V+YFT+LRGIRKTYEDCC VR IL+G+ V VDERD+
Sbjct:   247 KSVSSSQLISSPAKPRLPGTEDKIVLYFTTLRGIRKTYEDCCCVRAILRGVQVSVDERDI 306

Query:   291 SMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEMIDD 350
             SM S ++ EL+ +LG       LP+VF+   +IGG EEI ++++ G+L ++++     + 
Sbjct:   307 SMDSKYRKELQSVLGAAEKPVCLPQVFIRGTHIGGVEEIMQLNDGGELAEMLKDFPACE- 365

Query:   351 GGRGNVGACEACGDVRFVPCETCSGSCKIY 380
                  +G C +CGD RFVPC  C GS K++
Sbjct:   366 ----RLGTCRSCGDARFVPCTNCDGSTKVF 391

GO:0005634 "nucleus" evidence=ISM

GO:0009055 "electron carrier activity" evidence=IEA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=IEA

GO:0045454 "cell redox homeostasis" evidence=IEA

GO:0048653 "anther development" evidence=RCA

TAIR|locus:2040267 AT2G41330 [Arabidopsis thaliana (taxid:3702)]

 Score = 334 (122.6 bits), Expect = 6.4e-51, Sum P(4) = 6.4e-51
 Identities = 76/202 (37%), Positives = 121/202 (59%)

Query:   189 NSKPFALEFDPDVIKTFRK--SFQEL----SPRHPFH--LRPLEN--DKLPAALDSLDVK 238
             + + F  + DP++I ++++  S ++L    S  H  H  L  L       P +  + +  
Sbjct:   181 SEESFLSDLDPNIISSYKRALSSKQLGKNSSNGHSNHSVLVSLPEYVSSSPLSSQTSEKD 240

Query:   239 KSNGAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKN 298
             +    +L+ +  + K+VVYFTSLRGIRKTYEDCC VR IL+G  V V+ERD+SM S ++ 
Sbjct:   241 QEKPRLLEKEDNENKIVVYFTSLRGIRKTYEDCCCVRAILRGFQVAVEERDISMDSKYRK 300

Query:   299 ELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEMIDDGGRGNVGA 358
             EL+  LG+      LP+VF+    IGG EEI+ +++ G+L ++++     +     ++GA
Sbjct:   301 ELQNALGEE-KPVCLPQVFIRGVRIGGIEEIKILNDGGELAEMLKDFPACE-----SIGA 354

Query:   359 CEACGDVRFVPCETCSGSCKIY 380
             C++CGD RFVPC  C GS K++
Sbjct:   355 CDSCGDARFVPCTNCGGSTKVF 376

GO:0005634 "nucleus" evidence=ISM

GO:0009055 "electron carrier activity" evidence=IEA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=IEA

GO:0045454 "cell redox homeostasis" evidence=IEA

GO:0048653 "anther development" evidence=RCA

TAIR|locus:2150640 AT5G03870 [Arabidopsis thaliana (taxid:3702)]

 Score = 298 (110.0 bits), Expect = 4.8e-43, Sum P(4) = 4.8e-43
 Identities = 67/192 (34%), Positives = 104/192 (54%)

Query:   191 KPFALEFDPDVIKTFRKSFQELSPRHPFHLRPLENDKLPAALDSLDVKKSNGAVLDHKC- 249
             K ++  FDPD++ ++ +   +   +    + P+ ++          ++K        KC 
Sbjct:   178 KSYSPMFDPDLVASYERELSQEKEQIKMVISPVVHESRKTEKTERILEK-----FPEKCP 232

Query:   250 --GKEKLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDG 307
               G+  +V+Y T+LRGIRKT+EDC  VR IL    VR  ERD+SMHS FK E++ ++G  
Sbjct:   233 PGGEHSVVIYITTLRGIRKTFEDCNVVRSILDSHEVRFSERDVSMHSVFKEEIRGIMGTK 292

Query:   308 FSGGGLPRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEMIDDGGRGNVGACEACGDVRF 367
                  +P VFV  + +G  EE+ R+ EEG+L  ++EG      GG      C  CG +RF
Sbjct:   293 HVK--IPAVFVKGRMVGSVEEVMRLEEEGKLGILLEGIPAARLGG----SCCRGCGGMRF 346

Query:   368 VPCETCSGSCKI 379
             + C  C+GSCK+
Sbjct:   347 MMCVVCNGSCKV 358

GO:0005634 "nucleus" evidence=ISM

GO:0009055 "electron carrier activity" evidence=IEA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=IEA

GO:0045454 "cell redox homeostasis" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0048653 "anther development" evidence=RCA

TAIR|locus:2139252 AT4G10630 [Arabidopsis thaliana (taxid:3702)]

 Score = 310 (114.2 bits), Expect = 8.6e-37, Sum P(3) = 8.6e-37
 Identities = 80/216 (37%), Positives = 114/216 (52%)

Query:   220 LRPLENDKLPAALDSLDVKKSNGAV---LDHK----C---GKEKLVVYFTSLRGIRKTYE 269
             L+PL+ ++  +  +S   +KS   +   LD K    C   G+ ++V+Y TSLRG+R+T+E
Sbjct:   134 LKPLDLNREDSDSNSRSPRKSFKPLDLKLDEKFERICPPGGENRVVMYTTSLRGVRQTFE 193

Query:   270 DCCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGL----PRVFVGKKYIGG 325
              C  VR  ++  GV V ERD+SM   F+ EL  L+       G+    PRVFV  +YIGG
Sbjct:   194 ACNAVRAAVESFGVVVCERDVSMDRRFREELVSLMAKRVGDEGVAALPPRVFVKGRYIGG 253

Query:   326 AEEIRRMHEEGQLEKVVEGCEMIDDGGRGNVGACEACGDVRFVPCETCSGSCKIYYXXXX 385
              EE+ R+ EEG   +++ G      GG  + GAC+ CG + F+PC  C+GSCK+      
Sbjct:   254 GEEVLRLVEEGSFGELISGIPRKKAGGCES-GACDGCGGLFFLPCFRCNGSCKMVKGWGS 312

Query:   386 XXXXXXXXXXXXXXADFGFQRCPDCNENGLTRCPIC 421
                                 RC +CNENGL  CPIC
Sbjct:   313 ASVVV---------------RCNECNENGLVPCPIC 333

GO:0005634 "nucleus" evidence=ISM

GO:0009055 "electron carrier activity" evidence=IEA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=IEA

GO:0045454 "cell redox homeostasis" evidence=IEA

TAIR|locus:2171223 AT5G58530 [Arabidopsis thaliana (taxid:3702)]

 Score = 297 (109.6 bits), Expect = 6.2e-33, Sum P(2) = 6.2e-33
 Identities = 65/139 (46%), Positives = 87/139 (62%)

Query:   250 GKEK-LVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGF 308
             G EK +VVYFTSLR +R T+E C  V  IL    VR+DERDLSM + F  EL+ + G   
Sbjct:   110 GAEKSIVVYFTSLRVVRPTFEACKSVTSILHSFPVRIDERDLSMDASFSTELQRIFGKDQ 169

Query:   309 SGGG-------LPRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEMIDDGGRGNVGACEA 361
             +          LPRVF+G +YIGGAEE++++HE G+L+K+V+    I+ G       CE 
Sbjct:   170 NQNQNQAKTPKLPRVFIGGRYIGGAEEVKQLHEIGELKKLVQELPKIEPG------VCEM 223

Query:   362 CGDVRFVPCETCSGSCKIY 380
             CG  RFVPC+ C GS K++
Sbjct:   224 CGGHRFVPCKDCHGSHKVH 242

GO:0005634 "nucleus" evidence=ISM

GO:0009055 "electron carrier activity" evidence=IEA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=IEA

GO:0045454 "cell redox homeostasis" evidence=IEA

GO:0048653 "anther development" evidence=RCA

TAIR|locus:2035589 AT1G32760 [Arabidopsis thaliana (taxid:3702)]

 Score = 285 (105.4 bits), Expect = 1.6e-32, Sum P(3) = 1.6e-32
 Identities = 67/160 (41%), Positives = 94/160 (58%)

Query:   223 LENDKLPAALDSLDVKKSNGAVLDHKC--GKEKLVVYFTSLRGIRKTYEDCCHVRVILKG 280
             L+N      L  LD K +  +  +  C  G+ ++V+Y TSLRG+R+T+E C  VR  ++ 
Sbjct:   132 LKNPNDYEVLKPLDPKLAEES--ERLCDGGENRVVIYTTSLRGVRRTFEACNAVRAAIES 189

Query:   281 LGVRVDERDLSMHSGFKNELKELLGDGFSGGGLP-RVFVGKKYIGGAEEIRRMHEEGQLE 339
              GV V ERD+SM  GF+ EL  L+    +   LP RVFV  KYIGGAEE+ R+ EEG L 
Sbjct:   190 FGVVVCERDVSMDRGFREELSNLMAVESTAAVLPPRVFVKGKYIGGAEEVMRLVEEGLLG 249

Query:   340 KVVEGCEMIDDGGRGNVGACEACGDVRFVPCETCSGSCKI 379
             ++++      D  R   G C  CG + F+PC  C+GSCK+
Sbjct:   250 ELLKEIPRKKD--RCG-GGCGGCGGLAFLPCSGCNGSCKV 286

GO:0009055 "electron carrier activity" evidence=IEA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=IEA

GO:0045454 "cell redox homeostasis" evidence=IEA

GO:0048653 "anther development" evidence=RCA

TAIR|locus:2019479 AT1G64500 [Arabidopsis thaliana (taxid:3702)]

 Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
 Identities = 78/177 (44%), Positives = 103/177 (58%)

Query:   248 KC---GKEKLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKNELKELL 304
             KC   G E L+VY TSL+G+R+TYEDC  VR I++  GV VDERD+S+ +G  +ELKELL
Sbjct:   205 KCPPGGGEGLIVYTTSLQGVRRTYEDCMRVRAIMEQQGVVVDERDVSLDAGVLSELKELL 264

Query:   305 GDGFSGGGLPRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEMIDDGGRGNVGACEACGD 364
              D  S    PRVFV  +Y+GGA E+  M+E G+L +V+    +   G  G +  CE CG 
Sbjct:   265 QDEASVAP-PRVFVKGRYLGGAAEVTAMNENGKLGRVLRWARVERVGEEGRL-TCEGCGG 322

Query:   365 VRFVPCETCSGSCKIYYXXXXXXXXXXXXXXXXXXADFGFQRCPDCNENGLTRCPIC 421
              R++PC  C GSCK+                        ++RC  CNENGL RCP+C
Sbjct:   323 ARWLPCFECGGSCKV--------------AAVGAAKGERWERCVKCNENGLIRCPVC 365

GO:0005634 "nucleus" evidence=ISM

GO:0009055 "electron carrier activity" evidence=IEA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=IEA

GO:0045454 "cell redox homeostasis" evidence=IEA

GO:0005884 "actin filament" evidence=IDA

GO:0009902 "chloroplast relocation" evidence=IMP

GO:0051017 "actin filament bundle assembly" evidence=IDA

GO:0048653 "anther development" evidence=RCA

TAIR|locus:2159038 AT5G13810 [Arabidopsis thaliana (taxid:3702)]

 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 68/171 (39%), Positives = 99/171 (57%)

Query:   241 NGAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKNEL 300
             N +V+     ++++VVYFTSLRGIR+TYEDC  VR+I +G  V +DERD+SM   ++ EL
Sbjct:   116 NNSVIRLPGTEDRIVVYFTSLRGIRRTYEDCYAVRMIFRGFRVWIDERDVSMDIAYRKEL 175

Query:   301 KELLGDGFSGGGLPRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEMIDDGGRGNVGACE 360
             +  +G+      LP+VF+  KY+GGA+ I+ + E G+L K+++   M   G       C 
Sbjct:   176 QIAMGE--KSVSLPQVFIMGKYVGGADVIKSLFEIGELAKILKEFPMRQPGF-----VCH 228

Query:   361 ACGDVRFVPCETCSGSCKIYYXXXXXXXXXXXXXXXXXXADFGFQRCPDCN 411
              CGD+RFVPC  CSGS K++                    + G  RCPDC+
Sbjct:   229 CCGDIRFVPCSNCSGSKKLF------DEDEDRVKRCPECNENGLIRCPDCS 273

GO:0005634 "nucleus" evidence=ISM

GO:0009055 "electron carrier activity" evidence=IEA

GO:0015035 "protein disulfide oxidoreductase activity" evidence=IEA

GO:0045454 "cell redox homeostasis" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FLE8	Y5986_ARATH	No assigned EC number	0.4894	0.8368	0.9076	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	423
cd03031	147	cd03031, GRX_GRX_like, Glutaredoxin (GRX) family,	4e-72
cd02066	72	cd02066, GRX_family, Glutaredoxin (GRX) family; co	3e-16
pfam00462	60	pfam00462, Glutaredoxin, Glutaredoxin	2e-09
cd03419	82	cd03419, GRX_GRXh_1_2_like, Glutaredoxin (GRX) fam	4e-08
cd03027	73	cd03027, GRX_DEP, Glutaredoxin (GRX) family, Dishe	2e-05
TIGR02180	84	TIGR02180, GRX_euk, Glutaredoxin	3e-05
TIGR02189	99	TIGR02189, GlrX-like_plant, Glutaredoxin-like fami	1e-04

>gnl|CDD|239329 cd03031, GRX_GRX_like, Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs

 Score =  222 bits (569), Expect = 4e-72
 Identities = 82/166 (49%), Positives = 106/166 (63%), Gaps = 19/166 (11%)

Query: 253 KLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGG 312
           ++V+Y TSLRG+RKT+EDC +VR IL+   V+ DERD+SM SGF+ EL+ELLG       
Sbjct: 1   RVVLYTTSLRGVRKTFEDCNNVRAILESFRVKFDERDVSMDSGFREELRELLGAELKAVS 60

Query: 313 LPRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEMIDDGGRGNVGACEACGDVRFVPCET 372
           LPRVFV  +Y+GGAEE+ R++E G+L K+++G      G     G CE CG  RFVPC  
Sbjct: 61  LPRVFVDGRYLGGAEEVLRLNESGELRKLLKGIRARAGG-----GVCEGCGGARFVPCSE 115

Query: 373 CSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLTRC 418
           C+GSCK++ E                 A  GF RCP+CNENGL RC
Sbjct: 116 CNGSCKVFAE--------------NATAAGGFLRCPECNENGLVRC 147

This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive. Length = 147

>gnl|CDD|239017 cd02066, GRX_family, Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain

 Score = 72.9 bits (180), Expect = 3e-16
 Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 10/82 (12%)

Query: 253 KLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGG 312
           K+VV+  S      T   C   + +L+ LG+  +E D+      + ELKEL G       
Sbjct: 1   KVVVFSKS------TCPYCKRAKRLLESLGIEFEEIDILEDGELREELKELSG----WPT 50

Query: 313 LPRVFVGKKYIGGAEEIRRMHE 334
           +P++F+  ++IGG ++++ +HE
Sbjct: 51  VPQIFINGEFIGGYDDLKALHE 72

GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH -> GSH reductase -> GSH -> GRX -> protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which are members of this family. E. coli GRX2, however, is a 24-kDa protein that belongs to the GSH S-transferase (GST) family. Length = 72

>gnl|CDD|215931 pfam00462, Glutaredoxin, Glutaredoxin

 Score = 52.9 bits (128), Expect = 2e-09
 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 9/69 (13%)

Query: 255 VVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLP 314
           VV FT     + T   C   + +L  LGV+ +E D+      + ELKEL G       +P
Sbjct: 1   VVLFT-----KPTCPFCKRAKRLLDSLGVKFEEIDVDEDPEIREELKELSG----WPTVP 51

Query: 315 RVFVGKKYI 323
           +VF+  ++I
Sbjct: 52  QVFIDGEHI 60

Length = 60

>gnl|CDD|239511 cd03419, GRX_GRXh_1_2_like, Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain

 Score = 50.2 bits (121), Expect = 4e-08
 Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 12/81 (14%)

Query: 266 KTYEDCCH---VRVILKGLGVR--VDERDLSMH-SGFKNELKELLGDGFSGGGLPRVFVG 319
           K+Y  C +    + +LK LGV+  V E D     S  ++ L+EL G       +P VF+G
Sbjct: 7   KSY--CPYCKRAKSLLKELGVKPAVVELDQHEDGSEIQDYLQELTG----QRTVPNVFIG 60

Query: 320 KKYIGGAEEIRRMHEEGQLEK 340
            K+IGG +++  +H+ G+L K
Sbjct: 61  GKFIGGCDDLMALHKSGKLVK 81

GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH -> GSH reductase -> GSH -> GRX -> protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, which are members of this subfamily. Also included in this subfamily are the N-terminal GRX domains of proteins similar to human thioredoxin reductase 1 and 3. Length = 82

>gnl|CDD|239325 cd03027, GRX_DEP, Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions

 Score = 42.0 bits (99), Expect = 2e-05
 Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 4/66 (6%)

Query: 269 EDCCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEE 328
           EDC  VR+ L+  G+   E ++ +    K EL+E  G       +P++F  +K +GG  +
Sbjct: 12  EDCTAVRLFLREKGLPYVEINIDIFPERKAELEERTG----SSVVPQIFFNEKLVGGLTD 67

Query: 329 IRRMHE 334
           ++ + E
Sbjct: 68  LKSLEE 73

GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions. Length = 73

>gnl|CDD|233765 TIGR02180, GRX_euk, Glutaredoxin

 Score = 41.9 bits (99), Expect = 3e-05
 Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 10/81 (12%)

Query: 266 KTYEDCCH-VRVILKGLGVR----VDERDLSMH-SGFKNELKELLGDGFSGGGLPRVFVG 319
           K+Y   C   + IL  L V+    V E D   + S  ++ L+E+ G       +P +F+ 
Sbjct: 6   KSYCPYCKKAKEILAKLNVKPAYEVVELDQLSNGSEIQDYLEEITG----QRTVPNIFIN 61

Query: 320 KKYIGGAEEIRRMHEEGQLEK 340
            K+IGG  ++  +++ G+L +
Sbjct: 62  GKFIGGCSDLLALYKSGKLAE 82

Glutaredoxins are thioltransferases (disulfide reductases) which utilize glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system. Glutaredoxins utilize the CXXC motif common to thioredoxins and are involved in multiple cellular processes including protection from redox stress, reduction of critical enzymes such as ribonucleotide reductase and the generation of reduced sulfur for iron sulfur cluster formation. Glutaredoxins are capable of reduction of mixed disulfides of glutathione as well as the formation of glutathione mixed disulfides. This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses. Length = 84

>gnl|CDD|233771 TIGR02189, GlrX-like_plant, Glutaredoxin-like family

 Score = 40.5 bits (95), Expect = 1e-04
 Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 16/92 (17%)

Query: 252 EKLVVYFTSLRGIRKTYEDCC--HV-RVILKGLGVR--VDERDLSMHSGFKNELKELLGD 306
           EK VV F+           CC  HV + +L  LGV   V E D         +++  L  
Sbjct: 7   EKAVVIFSR-SS-------CCMCHVVKRLLLTLGVNPAVHEIDKEPAG---KDIENALSR 55

Query: 307 GFSGGGLPRVFVGKKYIGGAEEIRRMHEEGQL 338
                 +P VFVG K +GG E +  +H  G L
Sbjct: 56  LGCSPAVPAVFVGGKLVGGLENVMALHISGSL 87

This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa. Length = 99

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	423
KOG2824	281	consensus Glutaredoxin-related protein [Posttransl	100.0
cd03031	147	GRX_GRX_like Glutaredoxin (GRX) family, GRX-like d	100.0
cd03030	92	GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3	99.9
PRK10824	115	glutaredoxin-4; Provisional	99.85
TIGR02189	99	GlrX-like_plant Glutaredoxin-like family. This fam	99.85
PHA03050	108	glutaredoxin; Provisional	99.82
TIGR00365	97	monothiol glutaredoxin, Grx4 family. The gene for	99.82
KOG1752	104	consensus Glutaredoxin and related proteins [Postt	99.82
cd03028	90	GRX_PICOT_like Glutaredoxin (GRX) family, PKC-inte	99.78
PTZ00062	204	glutaredoxin; Provisional	99.73
COG0278	105	Glutaredoxin-related protein [Posttranslational mo	99.72
TIGR02181	79	GRX_bact Glutaredoxin, GrxC family. This family of	99.7
PRK10638	83	glutaredoxin 3; Provisional	99.68
cd03418	75	GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX b	99.63
cd03027	73	GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Eg	99.6
TIGR02180	84	GRX_euk Glutaredoxin. This model represents eukary	99.6
KOG0911	227	consensus Glutaredoxin-related protein [Posttransl	99.57
cd03419	82	GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX h	99.56
COG0695	80	GrxC Glutaredoxin and related proteins [Posttransl	99.55
PF04908	99	SH3BGR: SH3-binding, glutamic acid-rich protein; I	99.5
cd03029	72	GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hyb	99.48
TIGR02183	86	GRXA Glutaredoxin, GrxA family. This model include	99.45
PRK11200	85	grxA glutaredoxin 1; Provisional	99.45
TIGR02190	79	GlrX-dom Glutaredoxin-family domain. This C-termin	99.45
cd02066	72	GRX_family Glutaredoxin (GRX) family; composed of	99.45
PRK12759	410	bifunctional gluaredoxin/ribonucleoside-diphosphat	99.36
PF00462	60	Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Gl	99.28
TIGR02194	72	GlrX_NrdH Glutaredoxin-like protein NrdH. NrdH-red	98.95
PRK10329	81	glutaredoxin-like protein; Provisional	98.89
TIGR02196	74	GlrX_YruB Glutaredoxin-like protein, YruB-family.	98.61
cd02976	73	NrdH NrdH-redoxin (NrdH) family; NrdH is a small m	98.53
KOG4023	108	consensus Uncharacterized conserved protein [Funct	98.16
TIGR02200	77	GlrX_actino Glutaredoxin-like protein. This family	98.03
cd02973	67	TRX_GRX_like Thioredoxin (TRX)-Glutaredoxin (GRX)-	97.93
cd03040	77	GST_N_mPGES2 GST_N family; microsomal Prostaglandi	97.58
cd00570	71	GST_N_family Glutathione S-transferase (GST) famil	97.46
cd03041	77	GST_N_2GST_N GST_N family, 2 repeats of the N-term	97.38
cd03037	71	GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) sub	97.27
cd02977	105	ArsC_family Arsenate Reductase (ArsC) family; comp	96.96
cd03036	111	ArsC_like Arsenate Reductase (ArsC) family, unknow	96.93
cd03055	89	GST_N_Omega GST_N family, Class Omega subfamily; G	96.86
cd03059	73	GST_N_SspA GST_N family, Stringent starvation prot	96.77
PRK01655	131	spxA transcriptional regulator Spx; Reviewed	96.63
cd03060	71	GST_N_Omega_like GST_N family, Omega-like subfamil	96.43
cd03051	74	GST_N_GTT2_like GST_N family, Saccharomyces cerevi	96.2
TIGR01617	117	arsC_related transcriptional regulator, Spx/MgsR f	96.19
cd03032	115	ArsC_Spx Arsenate Reductase (ArsC) family, Spx sub	96.13
cd03054	72	GST_N_Metaxin GST_N family, Metaxin subfamily; com	96.08
PRK12559	131	transcriptional regulator Spx; Provisional	96.06
PRK13344	132	spxA transcriptional regulator Spx; Reviewed	96.05
PF05768	81	DUF836: Glutaredoxin-like domain (DUF836); InterPr	95.89
TIGR00411	82	redox_disulf_1 small redox-active disulfide protei	95.79
PF13417	75	GST_N_3: Glutathione S-transferase, N-terminal dom	95.76
cd03035	105	ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb s	95.67
cd03056	73	GST_N_4 GST_N family, unknown subfamily 4; compose	95.65
cd03045	74	GST_N_Delta_Epsilon GST_N family, Class Delta and	95.56
PF13192	76	Thioredoxin_3: Thioredoxin domain; PDB: 1ZYP_B 1ZY	95.49
cd02975	113	PfPDO_like_N Pyrococcus furiosus protein disulfide	95.35
PLN03165	111	chaperone protein dnaJ-related; Provisional	95.34
cd03033	113	ArsC_15kD Arsenate Reductase (ArsC) family, 15kD p	95.2
TIGR01295	122	PedC_BrcD bacteriocin transport accessory protein,	95.05
TIGR00412	76	redox_disulf_2 small redox-active disulfide protei	94.83
cd03026	89	AhpF_NTD_C TRX-GRX-like family, Alkyl hydroperoxid	94.8
cd03080	75	GST_N_Metaxin_like GST_N family, Metaxin subfamily	94.69
cd03053	76	GST_N_Phi GST_N family, Class Phi subfamily; compo	94.53
cd03042	73	GST_N_Zeta GST_N family, Class Zeta subfamily; GST	94.4
cd03076	73	GST_N_Pi GST_N family, Class Pi subfamily; GSTs ar	94.08
PHA02125	75	thioredoxin-like protein	93.88
COG1393	117	ArsC Arsenate reductase and related proteins, glut	93.2
cd03061	91	GST_N_CLIC GST_N family, Chloride Intracellular Ch	92.91
cd03058	74	GST_N_Tau GST_N family, Class Tau subfamily; GSTs	92.89
COG3019	149	Predicted metal-binding protein [General function	92.7
TIGR01616	126	nitro_assoc nitrogenase-associated protein. This m	92.68
cd03038	84	GST_N_etherase_LigE GST_N family, Beta etherase Li	92.28
cd03052	73	GST_N_GDAP1 GST_N family, Ganglioside-induced diff	92.26
TIGR00014	114	arsC arsenate reductase (glutaredoxin). composed o	92.17
PRK10853	118	putative reductase; Provisional	92.0
cd02953	104	DsbDgamma DsbD gamma family; DsbD gamma is the C-t	91.85
cd03034	112	ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC s	91.8
PRK10026	141	arsenate reductase; Provisional	91.72
PRK10387	210	glutaredoxin 2; Provisional	91.61
cd03039	72	GST_N_Sigma_like GST_N family, Class Sigma_like; c	91.57
cd03049	73	GST_N_3 GST_N family, unknown subfamily 3; compose	91.02
TIGR02182	209	GRXB Glutaredoxin, GrxB family. This model include	90.29
cd02947	93	TRX_family TRX family; composed of two groups: Gro	90.2
cd03048	81	GST_N_Ure2p_like GST_N family, Ure2p-like subfamil	89.77
cd03044	75	GST_N_EF1Bgamma GST_N family, Gamma subunit of Elo	88.81
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	88.7
cd01659	69	TRX_superfamily Thioredoxin (TRX) superfamily; a l	88.66
PHA02278	103	thioredoxin-like protein	88.65
KOG3029	370	consensus Glutathione S-transferase-related protei	88.5
PF13409	70	GST_N_2: Glutathione S-transferase, N-terminal dom	88.32
PRK14287	371	chaperone protein DnaJ; Provisional	87.71
PRK10767	371	chaperone protein DnaJ; Provisional	87.68
PRK14300	372	chaperone protein DnaJ; Provisional	87.55
PRK09481	211	sspA stringent starvation protein A; Provisional	87.39
PF00684	66	DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR0	87.2
PRK14290	365	chaperone protein DnaJ; Provisional	86.55
cd03043	73	GST_N_1 GST_N family, unknown subfamily 1; compose	86.49
cd03050	76	GST_N_Theta GST_N family, Class Theta subfamily; c	86.24
cd03057	77	GST_N_Beta GST_N family, Class Beta subfamily; GST	86.16
COG0178	935	UvrA Excinuclease ATPase subunit [DNA replication,	86.12
KOG2813	406	consensus Predicted molecular chaperone, contains	86.03
PRK14284	391	chaperone protein DnaJ; Provisional	85.86
TIGR03140	515	AhpF alkyl hydroperoxide reductase, F subunit. Thi	85.51
PRK14285	365	chaperone protein DnaJ; Provisional	85.04
PRK14296	372	chaperone protein DnaJ; Provisional	84.8
PRK14289	386	chaperone protein DnaJ; Provisional	84.51
cd02949	97	TRX_NTR TRX domain, novel NADPH thioredoxin reduct	84.05
cd03046	76	GST_N_GTT1_like GST_N family, Saccharomyces cerevi	83.97
PRK14285	365	chaperone protein DnaJ; Provisional	83.94
TIGR02187	215	GlrX_arch Glutaredoxin-like domain protein. This f	83.87
PRK14292	371	chaperone protein DnaJ; Provisional	83.78
PRK14280	376	chaperone protein DnaJ; Provisional	83.75
PRK14282	369	chaperone protein DnaJ; Provisional	83.67
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	83.65
TIGR00862	236	O-ClC intracellular chloride channel protein. Thes	83.63
PRK14279	392	chaperone protein DnaJ; Provisional	83.56
PRK14286	372	chaperone protein DnaJ; Provisional	83.56
PF03960	110	ArsC: ArsC family; InterPro: IPR006660 Several bac	83.49
PRK14295	389	chaperone protein DnaJ; Provisional	83.4
PRK14301	373	chaperone protein DnaJ; Provisional	83.35
PRK14296	372	chaperone protein DnaJ; Provisional	83.21
PRK14277	386	chaperone protein DnaJ; Provisional	83.16
PF13901	202	DUF4206: Domain of unknown function (DUF4206)	83.13
PRK14276	380	chaperone protein DnaJ; Provisional	83.11
PRK15317	517	alkyl hydroperoxide reductase subunit F; Provision	83.02
PRK14297	380	chaperone protein DnaJ; Provisional	82.87
PRK10767	371	chaperone protein DnaJ; Provisional	82.86
PRK14291	382	chaperone protein DnaJ; Provisional	82.86
PTZ00037	421	DnaJ_C chaperone protein; Provisional	82.73
TIGR01068	101	thioredoxin thioredoxin. Several proteins, such as	82.68
PRK14288	369	chaperone protein DnaJ; Provisional	82.66
PRK14288	369	chaperone protein DnaJ; Provisional	82.53
PRK14284	391	chaperone protein DnaJ; Provisional	82.33
PF00684	66	DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR0	82.21
cd03047	73	GST_N_2 GST_N family, unknown subfamily 2; compose	82.2
PRK14282	369	chaperone protein DnaJ; Provisional	82.1
PRK14298	377	chaperone protein DnaJ; Provisional	82.09
PRK14294	366	chaperone protein DnaJ; Provisional	82.09
PRK14298	377	chaperone protein DnaJ; Provisional	82.03
PRK14286	372	chaperone protein DnaJ; Provisional	81.87
PRK14301	373	chaperone protein DnaJ; Provisional	81.56
PRK14278	378	chaperone protein DnaJ; Provisional	81.52
PRK14300	372	chaperone protein DnaJ; Provisional	81.33
PRK14281	397	chaperone protein DnaJ; Provisional	81.31
cd02989	113	Phd_like_TxnDC9 Phosducin (Phd)-like family, Thior	81.29
PRK14295	389	chaperone protein DnaJ; Provisional	81.07
PRK14280	376	chaperone protein DnaJ; Provisional	80.9
TIGR02187	215	GlrX_arch Glutaredoxin-like domain protein. This f	80.7
PRK14293	374	chaperone protein DnaJ; Provisional	80.65
PRK14279	392	chaperone protein DnaJ; Provisional	80.62
PRK14294	366	chaperone protein DnaJ; Provisional	80.16

>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=1.8e-64  Score=489.30  Aligned_cols=254  Identities=42%  Similarity=0.721  Sum_probs=190.1

Q ss_pred             hhhhhhhhhcCCcccCCCCCCCCCCCCCcchHHhhccCCCCCCCC--CCCCCCCCccccccCCCCCCCCCCCCccccccc
Q 045109           86 KEWSNMIQEKIPKVVPKTPVRTPPGEPETINAWELMEGLEDVSPL--RSPNHFRSFSFDFARGPSSLLDSDPPMSKLCED  163 (423)
Q Consensus        86 ~~~~~~~~~~~~~~~~~tp~~tp~~epe~IN~WELM~GLed~~~~--~~p~~~~~fs~~~~~~~~~~~~~~~~~~~~~~~  163 (423)
                      +.|.++...+++.+    ....+|..||+||+||||.||++..++  ++|....++|+.......    .++        
T Consensus        22 ~~~~~~k~~~~~~~----~~~~~~~~~~~i~s~e~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~----~~~--------   85 (281)
T KOG2824|consen   22 RVTVSGKESKIAPI----RDSSSPTGPEVINSWELMLDLDDELHRSCKTPITPTSVSLRVKALNL----LGK--------   85 (281)
T ss_pred             ceeccccccccccc----ccCCCCCchhhhhhhhhccCccccccccccCCCCCcccccccccccc----ccc--------
Confidence            34444444444433    334667799999999999999999885  777665555443222211    000        


Q ss_pred             hhhhhhhhhhHhhhcCCCCCCCCCCCCCCCCCCCCHH---HHHHHHHHhhhcCCCCCCcCCCCccCcchhhhchhhhccC
Q 045109          164 VSAERKTMSMWLQMANGDDHGDSESNSKPFALEFDPD---VIKTFRKSFQELSPRHPFHLRPLENDKLPAALDSLDVKKS  240 (423)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fdp~---~is~frkal~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (423)
                        ...+.+|+|+...      . ...+.++...+|++   ++..|++                                 
T Consensus        86 --s~~~~~p~~~~~~------~-~~~~~~~l~~~~~~~~~~~~e~~~---------------------------------  123 (281)
T KOG2824|consen   86 --SKGSWPPVILKPE------K-RLSSESGLKELDKSPNKLLLEFKE---------------------------------  123 (281)
T ss_pred             --ccCcCCccccccc------c-cccccccccccccccccchhhhhh---------------------------------
Confidence              0012244444332      0 00112345555554   1111111                                 


Q ss_pred             hhHHHhhhcCCCcEEEEEeCCCCCCCCCCcHHHHHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCC
Q 045109          241 NGAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGK  320 (423)
Q Consensus       241 ~~~~v~~li~~~kVVIYtTSLrGIRKT~c~Cc~VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdG  320 (423)
                          +-.+.++++||||||||||||+||++|+.||+||++++|.|+||||+||..|++||+++|+......++|||||+|
T Consensus       124 ----~~~Pgge~~VVvY~TsLRgvRkTfE~C~~VR~ilesf~V~v~ERDVSMd~~fr~EL~~~lg~~~~~~~LPrVFV~G  199 (281)
T KOG2824|consen  124 ----VCPPGGEDRVVVYTTSLRGVRKTFEDCNAVRAILESFRVKVDERDVSMDSEFREELQELLGEDEKAVSLPRVFVKG  199 (281)
T ss_pred             ----cCCCCCCceEEEEEcccchhhhhHHHHHHHHHHHHhCceEEEEecccccHHHHHHHHHHHhcccccCccCeEEEcc
Confidence                0125678899999999999999999999999999999999999999999999999999999855567999999999


Q ss_pred             EEEcchHHHHHHHHcCchHHHHcccccccCCCCCCCccccccCccceEeCCCCCCcceeccccchhhhcccCCCCccccC
Q 045109          321 KYIGGAEEIRRMHEEGQLEKVVEGCEMIDDGGRGNVGACEACGDVRFVPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEA  400 (423)
Q Consensus       321 e~IGGaDEV~~LhEsGeL~kLL~~~~~~~~~~~g~~~~C~~CGG~rfVpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~  400 (423)
                      +||||+++|++|||.|+|.+||++++..      ..+.|++|||.||+||..||||||++.+.               ..
T Consensus       200 ryIGgaeeV~~LnE~GkL~~lL~~~p~~------~~~~C~~CGg~rFlpC~~C~GS~kv~~~~---------------~~  258 (281)
T KOG2824|consen  200 RYIGGAEEVVRLNEEGKLGKLLKGIPCE------GGGVCESCGGARFLPCSNCHGSCKVHEEE---------------ED  258 (281)
T ss_pred             EEeccHHHhhhhhhcchHHHHHhcCCCC------CCCcCCCcCCcceEecCCCCCceeeeeec---------------cC
Confidence            9999999999999999999999999932      25789999999999999999999999851               12


Q ss_pred             ccceeeCCCCCCCCcccCCCCC
Q 045109          401 DFGFQRCPDCNENGLTRCPICC  422 (423)
Q Consensus       401 ~~~~~RC~~CNENGLirCp~C~  422 (423)
                      +++|+||++||||||||||+|+
T Consensus       259 ~~~~~rC~~CNENGLvrCp~Cs  280 (281)
T KOG2824|consen  259 DGGVLRCLECNENGLVRCPVCS  280 (281)
T ss_pred             CCcEEECcccCCCCceeCCccC
Confidence            4579999999999999999997

>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs

Probab=100.00  E-value=1.5e-49  Score=356.94  Aligned_cols=147  Identities=55%  Similarity=1.078  Sum_probs=134.8

Q ss_pred             cEEEEEeCCCCCCCCCCcHHHHHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRM  332 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~L  332 (423)
                      +||||||||||||+|+..|.+||+||++++|.|+|+||+|+.++++||+++++..+++.|||||||+|+||||+++|++|
T Consensus         1 ~VvlYttsl~giR~t~~~C~~ak~iL~~~~V~~~e~DVs~~~~~~~EL~~~~g~~~~~~tvPqVFI~G~~IGG~del~~L   80 (147)
T cd03031           1 RVVLYTTSLRGVRKTFEDCNNVRAILESFRVKFDERDVSMDSGFREELRELLGAELKAVSLPRVFVDGRYLGGAEEVLRL   80 (147)
T ss_pred             CEEEEEcCCcCCCCcChhHHHHHHHHHHCCCcEEEEECCCCHHHHHHHHHHhCCCCCCCCCCEEEECCEEEecHHHHHHH
Confidence            69999999999999988888899999999999999999999999999999998777789999999999999999999999


Q ss_pred             HHcCchHHHHcccccccCCCCCCCccccccCccceEeCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCC
Q 045109          333 HEEGQLEKVVEGCEMIDDGGRGNVGACEACGDVRFVPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNE  412 (423)
Q Consensus       333 hEsGeL~kLL~~~~~~~~~~~g~~~~C~~CGG~rfVpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNE  412 (423)
                      |++|+|+++|++++...     ....|++|||+|||||..|+||||++.++.+              +.+.++||++|||
T Consensus        81 ~e~G~L~~lL~~~~~~~-----~~~~C~~Cgg~rfv~C~~C~Gs~k~~~~~~~--------------~~~~~~rC~~Cne  141 (147)
T cd03031          81 NESGELRKLLKGIRARA-----GGGVCEGCGGARFVPCSECNGSCKVFAENAT--------------AAGGFLRCPECNE  141 (147)
T ss_pred             HHcCCHHHHHhhccccc-----CCCCCCCCCCcCeEECCCCCCcceEEeccCc--------------ccccEEECCCCCc
Confidence            99999999999986532     2567999999999999999999999987421              2457999999999


Q ss_pred             CCcccC
Q 045109          413 NGLTRC  418 (423)
Q Consensus       413 NGLirC  418 (423)
                      ||||||
T Consensus       142 ngl~~c  147 (147)
T cd03031         142 NGLVRC  147 (147)
T ss_pred             cccccC
Confidence            999999

This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.

>cd03030 GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif

Probab=99.90  E-value=6.7e-24  Score=177.51  Aligned_cols=91  Identities=22%  Similarity=0.303  Sum_probs=86.1

Q ss_pred             cEEEEEeCCCCCCCCCCcHHHHHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRM  332 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~L  332 (423)
                      .|+||+|||+|+|+++..|+.|++||++++|.|+++||+++++.+++|+++.+...+.+|+|||||+|+||||+|++.+|
T Consensus         1 ~i~vY~ts~~g~~~~k~~~~~v~~lL~~k~I~f~eiDI~~d~~~r~em~~~~~~~~g~~tvPQIFi~~~~iGg~ddl~~l   80 (92)
T cd03030           1 VIKVYIASSSGSTEIKKRQQEVLGFLEAKKIEFEEVDISMNEENRQWMRENVPNENGKPLPPQIFNGDEYCGDYEAFFEA   80 (92)
T ss_pred             CEEEEEecccccHHHHHHHHHHHHHHHHCCCceEEEecCCCHHHHHHHHHhcCCCCCCCCCCEEEECCEEeeCHHHHHHH
Confidence            38999999999999999999999999999999999999999999999999987544678999999999999999999999


Q ss_pred             HHcCchHHHHc
Q 045109          333 HEEGQLEKVVE  343 (423)
Q Consensus       333 hEsGeL~kLL~  343 (423)
                      +++|+|.++|+
T Consensus        81 ~e~g~L~~lLk   91 (92)
T cd03030          81 KENNTLEEFLK   91 (92)
T ss_pred             HhCCCHHHHhC
Confidence            99999999986

The SH3BGR gene was cloned in an effort to identify genes mapping to chromosome 21, which could be involved in the pathogenesis of congenital heart disease affecting Down syndrome newborns. Several human SH3BGR-like (SH3BGRL) genes have been identified since, mapping to different locations in the chromosome. Of these, SH3BGRL3 was identified as a tumor necrosis factor (TNF) alpha inhibitory protein and was also named TIP-B1. Upregulation of expression of SH3BGRL3 is associated with differentiation. It has been suggested that it functions as a regulator of differentiation-related signal transduction pathways.

>PRK10824 glutaredoxin-4; Provisional

Probab=99.85  E-value=4.8e-21  Score=166.54  Aligned_cols=101  Identities=15%  Similarity=0.295  Sum_probs=85.6

Q ss_pred             hhHHHhhhcCCCcEEEEEeCCCCCC-CCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe
Q 045109          241 NGAVLDHKCGKEKLVVYFTSLRGIR-KTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV  318 (423)
Q Consensus       241 ~~~~v~~li~~~kVVIYtTSLrGIR-KT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV  318 (423)
                      ...+|+++|.+++||||   ++|.. .++||+|. |+++|..++|.|.++||..+.+.+++|.++    ++++|||||||
T Consensus         4 ~~~~v~~~I~~~~Vvvf---~Kg~~~~p~Cpyc~~ak~lL~~~~i~~~~idi~~d~~~~~~l~~~----sg~~TVPQIFI   76 (115)
T PRK10824          4 TIEKIQRQIAENPILLY---MKGSPKLPSCGFSAQAVQALSACGERFAYVDILQNPDIRAELPKY----ANWPTFPQLWV   76 (115)
T ss_pred             HHHHHHHHHhcCCEEEE---ECCCCCCCCCchHHHHHHHHHHcCCCceEEEecCCHHHHHHHHHH----hCCCCCCeEEE
Confidence            45678899999999999   33332 25999998 899999999999999998776555555554    57899999999


Q ss_pred             CCEEEcchHHHHHHHHcCchHHHHcccccc
Q 045109          319 GKKYIGGAEEIRRMHEEGQLEKVVEGCEMI  348 (423)
Q Consensus       319 dGe~IGGaDEV~~LhEsGeL~kLL~~~~~~  348 (423)
                      ||+||||+|++.+|+++|+|.++|+.+++.
T Consensus        77 ~G~~IGG~ddl~~l~~~G~L~~lL~~~~~~  106 (115)
T PRK10824         77 DGELVGGCDIVIEMYQRGELQQLIKETAAK  106 (115)
T ss_pred             CCEEEcChHHHHHHHHCCCHHHHHHHHHhh
Confidence            999999999999999999999999887764

>TIGR02189 GlrX-like_plant Glutaredoxin-like family

Probab=99.85  E-value=4.3e-21  Score=161.07  Aligned_cols=94  Identities=22%  Similarity=0.429  Sum_probs=83.1

Q ss_pred             hhhcCCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEc
Q 045109          246 DHKCGKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIG  324 (423)
Q Consensus       246 ~~li~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IG  324 (423)
                      +++|.+++|+||       ++++||+|. +|++|++++|.|+++||+.+.. ..++++.+...+|+.|+|||||+|++||
T Consensus         2 ~~~i~~~~Vvvy-------sk~~Cp~C~~ak~~L~~~~i~~~~vdid~~~~-~~~~~~~l~~~tg~~tvP~Vfi~g~~iG   73 (99)
T TIGR02189         2 RRMVSEKAVVIF-------SRSSCCMCHVVKRLLLTLGVNPAVHEIDKEPA-GKDIENALSRLGCSPAVPAVFVGGKLVG   73 (99)
T ss_pred             hhhhccCCEEEE-------ECCCCHHHHHHHHHHHHcCCCCEEEEcCCCcc-HHHHHHHHHHhcCCCCcCeEEECCEEEc
Confidence            467899999999       789999998 8999999999999999987655 3456666666678899999999999999


Q ss_pred             chHHHHHHHHcCchHHHHccccc
Q 045109          325 GAEEIRRMHEEGQLEKVVEGCEM  347 (423)
Q Consensus       325 GaDEV~~LhEsGeL~kLL~~~~~  347 (423)
                      |++++++|+++|+|+++|+.+++
T Consensus        74 G~ddl~~l~~~G~L~~~l~~~~~   96 (99)
T TIGR02189        74 GLENVMALHISGSLVPMLKQAGA   96 (99)
T ss_pred             CHHHHHHHHHcCCHHHHHHHhCc
Confidence            99999999999999999987654

This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.

>PHA03050 glutaredoxin; Provisional

Probab=99.82  E-value=2.9e-20  Score=159.10  Aligned_cols=99  Identities=19%  Similarity=0.370  Sum_probs=83.1

Q ss_pred             hHHHhhhcCCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCC---cEEEEECCCChhhHHHHHHHHcCCCCCCCCCceE
Q 045109          242 GAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGV---RVDERDLSMHSGFKNELKELLGDGFSGGGLPRVF  317 (423)
Q Consensus       242 ~~~v~~li~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV---~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVF  317 (423)
                      ..+|++++.+++|+||       ++++||+|. +|++|+.++|   .|+++||+.. ....++++.+...+|+.||||||
T Consensus         3 ~~~v~~~i~~~~V~vy-------s~~~CPyC~~ak~~L~~~~i~~~~~~~i~i~~~-~~~~~~~~~l~~~tG~~tVP~If   74 (108)
T PHA03050          3 EEFVQQRLANNKVTIF-------VKFTCPFCRNALDILNKFSFKRGAYEIVDIKEF-KPENELRDYFEQITGGRTVPRIF   74 (108)
T ss_pred             HHHHHHHhccCCEEEE-------ECCCChHHHHHHHHHHHcCCCcCCcEEEECCCC-CCCHHHHHHHHHHcCCCCcCEEE
Confidence            3578889999999999       788999998 9999999999   7999999741 11234444444445678999999


Q ss_pred             eCCEEEcchHHHHHHHHcCchHHHHcccccc
Q 045109          318 VGKKYIGGAEEIRRMHEEGQLEKVVEGCEMI  348 (423)
Q Consensus       318 VdGe~IGGaDEV~~LhEsGeL~kLL~~~~~~  348 (423)
                      |||++|||++++++|+++|+|.++|+.++++
T Consensus        75 I~g~~iGG~ddl~~l~~~g~L~~~l~~~~~~  105 (108)
T PHA03050         75 FGKTSIGGYSDLLEIDNMDALGDILSSIGVL  105 (108)
T ss_pred             ECCEEEeChHHHHHHHHcCCHHHHHHHcccc
Confidence            9999999999999999999999999988765

>TIGR00365 monothiol glutaredoxin, Grx4 family

Probab=99.82  E-value=6.6e-20  Score=153.41  Aligned_cols=93  Identities=19%  Similarity=0.372  Sum_probs=80.1

Q ss_pred             HHHhhhcCCCcEEEEEeCCCCC-CCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCC
Q 045109          243 AVLDHKCGKEKLVVYFTSLRGI-RKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGK  320 (423)
Q Consensus       243 ~~v~~li~~~kVVIYtTSLrGI-RKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdG  320 (423)
                      .+|+.++.+++||||.   +|. ..++||+|. ||++|+.+||.|+++||..+.+.+++|.++.    |+.|||||||||
T Consensus         3 ~~v~~~i~~~~Vvvf~---kg~~~~~~Cp~C~~ak~lL~~~~i~~~~~di~~~~~~~~~l~~~t----g~~tvP~vfi~g   75 (97)
T TIGR00365         3 ERIKEQIKENPVVLYM---KGTPQFPQCGFSARAVQILKACGVPFAYVNVLEDPEIRQGIKEYS----NWPTIPQLYVKG   75 (97)
T ss_pred             HHHHHHhccCCEEEEE---ccCCCCCCCchHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHh----CCCCCCEEEECC
Confidence            4577899999999993   332 247899998 9999999999999999987777777777654    467999999999


Q ss_pred             EEEcchHHHHHHHHcCchHHHH
Q 045109          321 KYIGGAEEIRRMHEEGQLEKVV  342 (423)
Q Consensus       321 e~IGGaDEV~~LhEsGeL~kLL  342 (423)
                      ++|||++++++|+++|+|.++|
T Consensus        76 ~~iGG~ddl~~l~~~g~L~~~l   97 (97)
T TIGR00365        76 EFVGGCDIIMEMYQSGELQTLL   97 (97)
T ss_pred             EEEeChHHHHHHHHCcChHHhC
Confidence            9999999999999999999986

The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.

>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]

Probab=99.82  E-value=8e-20  Score=156.60  Aligned_cols=97  Identities=25%  Similarity=0.460  Sum_probs=88.7

Q ss_pred             HHHhhhcCCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCE
Q 045109          243 AVLDHKCGKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKK  321 (423)
Q Consensus       243 ~~v~~li~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe  321 (423)
                      .++..++.+++||||       +|++|++|. +|.||..+++.+..++++.+ +...||+++|...++.+|||+|||+|+
T Consensus         5 ~~v~~~i~~~~VVif-------SKs~C~~c~~~k~ll~~~~v~~~vvELD~~-~~g~eiq~~l~~~tg~~tvP~vFI~Gk   76 (104)
T KOG1752|consen    5 AKVRKMISENPVVIF-------SKSSCPYCHRAKELLSDLGVNPKVVELDED-EDGSEIQKALKKLTGQRTVPNVFIGGK   76 (104)
T ss_pred             HHHHHHhhcCCEEEE-------ECCcCchHHHHHHHHHhCCCCCEEEEccCC-CCcHHHHHHHHHhcCCCCCCEEEECCE
Confidence            456778999999999       899999998 89999999999888888766 567799999998999999999999999


Q ss_pred             EEcchHHHHHHHHcCchHHHHccccc
Q 045109          322 YIGGAEEIRRMHEEGQLEKVVEGCEM  347 (423)
Q Consensus       322 ~IGGaDEV~~LhEsGeL~kLL~~~~~  347 (423)
                      +|||++++++||.+|+|.++|+.+.+
T Consensus        77 ~iGG~~dl~~lh~~G~L~~~l~~~~~  102 (104)
T KOG1752|consen   77 FIGGASDLMALHKSGELVPLLKEAGA  102 (104)
T ss_pred             EEcCHHHHHHHHHcCCHHHHHHHhhc
Confidence            99999999999999999999998764

>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins

Probab=99.78  E-value=8.8e-19  Score=143.85  Aligned_cols=88  Identities=23%  Similarity=0.401  Sum_probs=74.8

Q ss_pred             hhhcCCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEc
Q 045109          246 DHKCGKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIG  324 (423)
Q Consensus       246 ~~li~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IG  324 (423)
                      +.++.+++||||..|.  ...++|++|. ++++|+.+||.|+++||..+.+.+++|.++.    |..|+|||||||++||
T Consensus         2 ~~~i~~~~vvvf~k~~--~~~~~Cp~C~~ak~~L~~~~i~y~~idv~~~~~~~~~l~~~~----g~~tvP~vfi~g~~iG   75 (90)
T cd03028           2 KKLIKENPVVLFMKGT--PEEPRCGFSRKVVQILNQLGVDFGTFDILEDEEVRQGLKEYS----NWPTFPQLYVNGELVG   75 (90)
T ss_pred             hhhhccCCEEEEEcCC--CCCCCCcHHHHHHHHHHHcCCCeEEEEcCCCHHHHHHHHHHh----CCCCCCEEEECCEEEe
Confidence            4678899999992211  1346899998 8999999999999999988877777777765    4679999999999999


Q ss_pred             chHHHHHHHHcCchH
Q 045109          325 GAEEIRRMHEEGQLE  339 (423)
Q Consensus       325 GaDEV~~LhEsGeL~  339 (423)
                      |++++++||++|+|+
T Consensus        76 G~~~l~~l~~~g~L~   90 (90)
T cd03028          76 GCDIVKEMHESGELQ   90 (90)
T ss_pred             CHHHHHHHHHcCCcC
Confidence            999999999999985

The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein

>PTZ00062 glutaredoxin; Provisional

Probab=99.73  E-value=1.6e-17  Score=156.87  Aligned_cols=96  Identities=20%  Similarity=0.387  Sum_probs=83.5

Q ss_pred             hHHHhhhcCCCcEEEEEeCCCCCC-CCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeC
Q 045109          242 GAVLDHKCGKEKLVVYFTSLRGIR-KTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVG  319 (423)
Q Consensus       242 ~~~v~~li~~~kVVIYtTSLrGIR-KT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVd  319 (423)
                      ..+|+.+|.+++||||   ++|.+ .++|++|+ ++++|+.++|.|.++||..+.+.+++|.++    ++++|+||||||
T Consensus       103 ~~~v~~li~~~~Vvvf---~Kg~~~~p~C~~C~~~k~~L~~~~i~y~~~DI~~d~~~~~~l~~~----sg~~TvPqVfI~  175 (204)
T PTZ00062        103 VEKIERLIRNHKILLF---MKGSKTFPFCRFSNAVVNMLNSSGVKYETYNIFEDPDLREELKVY----SNWPTYPQLYVN  175 (204)
T ss_pred             HHHHHHHHhcCCEEEE---EccCCCCCCChhHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHH----hCCCCCCeEEEC
Confidence            4567789999999999   56643 36899998 899999999999999999887766666664    467899999999


Q ss_pred             CEEEcchHHHHHHHHcCchHHHHcc
Q 045109          320 KKYIGGAEEIRRMHEEGQLEKVVEG  344 (423)
Q Consensus       320 Ge~IGGaDEV~~LhEsGeL~kLL~~  344 (423)
                      |++|||++++++|+++|+|+++|..
T Consensus       176 G~~IGG~d~l~~l~~~G~L~~~l~~  200 (204)
T PTZ00062        176 GELIGGHDIIKELYESNSLRKVIPD  200 (204)
T ss_pred             CEEEcChHHHHHHHHcCChhhhhhh
Confidence            9999999999999999999999964

>COG0278 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]

Probab=99.72  E-value=2.1e-17  Score=141.25  Aligned_cols=97  Identities=19%  Similarity=0.374  Sum_probs=85.8

Q ss_pred             hHHHhhhcCCCcEEEEEeCCCCCCC-CCCcHHH-HHHHHHhCC-CcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe
Q 045109          242 GAVLDHKCGKEKLVVYFTSLRGIRK-TYEDCCH-VRVILKGLG-VRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV  318 (423)
Q Consensus       242 ~~~v~~li~~~kVVIYtTSLrGIRK-T~c~Cc~-VK~LL~~~g-V~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV  318 (423)
                      -.+|+..+.+++||||   |+|..+ +.|.+.. +.+||..+| |+|..+||-.+++.|+.|++.    +.|+|+||+||
T Consensus         5 ~~~I~~~i~~n~VvLF---MKGtp~~P~CGFS~~~vqiL~~~g~v~~~~vnVL~d~eiR~~lk~~----s~WPT~PQLyi   77 (105)
T COG0278           5 LDRIQKQIKENPVVLF---MKGTPEFPQCGFSAQAVQILSACGVVDFAYVDVLQDPEIRQGLKEY----SNWPTFPQLYV   77 (105)
T ss_pred             HHHHHHHhhcCceEEE---ecCCCCCCCCCccHHHHHHHHHcCCcceeEEeeccCHHHHhccHhh----cCCCCCceeeE
Confidence            3567889999999999   999865 5688876 899999999 899999998887777777765    46999999999


Q ss_pred             CCEEEcchHHHHHHHHcCchHHHHccc
Q 045109          319 GKKYIGGAEEIRRMHEEGQLEKVVEGC  345 (423)
Q Consensus       319 dGe~IGGaDEV~~LhEsGeL~kLL~~~  345 (423)
                      +|++|||+|.+.+|.++|+|+++|+..
T Consensus        78 ~GEfvGG~DIv~Em~q~GELq~~l~~~  104 (105)
T COG0278          78 NGEFVGGCDIVREMYQSGELQTLLKEA  104 (105)
T ss_pred             CCEEeccHHHHHHHHHcchHHHHHHhc
Confidence            999999999999999999999999853

>TIGR02181 GRX_bact Glutaredoxin, GrxC family

Probab=99.70  E-value=7.1e-17  Score=127.45  Aligned_cols=78  Identities=23%  Similarity=0.587  Sum_probs=71.2

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHHH
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRM  332 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~L  332 (423)
                      |+||       .+++|++|. |+++|+.+||.|+++|++++...++++.++.+    ..++|+|||+|++|||++++.+|
T Consensus         1 v~ly-------~~~~Cp~C~~a~~~L~~~~i~~~~~di~~~~~~~~~~~~~~g----~~~vP~i~i~g~~igg~~~~~~~   69 (79)
T TIGR02181         1 VTIY-------TKPYCPYCTRAKALLSSKGVTFTEIRVDGDPALRDEMMQRSG----RRTVPQIFIGDVHVGGCDDLYAL   69 (79)
T ss_pred             CEEE-------ecCCChhHHHHHHHHHHcCCCcEEEEecCCHHHHHHHHHHhC----CCCcCEEEECCEEEcChHHHHHH
Confidence            6799       678899988 99999999999999999999888888887654    57999999999999999999999


Q ss_pred             HHcCchHHHH
Q 045109          333 HEEGQLEKVV  342 (423)
Q Consensus       333 hEsGeL~kLL  342 (423)
                      +++|+|+++|
T Consensus        70 ~~~g~l~~~l   79 (79)
T TIGR02181        70 DREGKLDPLL   79 (79)
T ss_pred             HHcCChhhhC
Confidence            9999999886

This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.

>PRK10638 glutaredoxin 3; Provisional

Probab=99.68  E-value=2.4e-16  Score=126.68  Aligned_cols=80  Identities=20%  Similarity=0.474  Sum_probs=71.7

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRR  331 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~  331 (423)
                      +|+||       .+.+|++|. |+.+|+.++|.|+++||+.+.+.++++.++.    +..++|+|||||++|||++++++
T Consensus         3 ~v~ly-------~~~~Cp~C~~a~~~L~~~gi~y~~~dv~~~~~~~~~l~~~~----g~~~vP~i~~~g~~igG~~~~~~   71 (83)
T PRK10638          3 NVEIY-------TKATCPFCHRAKALLNSKGVSFQEIPIDGDAAKREEMIKRS----GRTTVPQIFIDAQHIGGCDDLYA   71 (83)
T ss_pred             cEEEE-------ECCCChhHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHHh----CCCCcCEEEECCEEEeCHHHHHH
Confidence            69999       678999998 9999999999999999987776677776654    45799999999999999999999


Q ss_pred             HHHcCchHHHHc
Q 045109          332 MHEEGQLEKVVE  343 (423)
Q Consensus       332 LhEsGeL~kLL~  343 (423)
                      |+++|+|.++|+
T Consensus        72 ~~~~g~l~~~~~   83 (83)
T PRK10638         72 LDARGGLDPLLK   83 (83)
T ss_pred             HHHcCCHHHHhC
Confidence            999999999985

>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain

Probab=99.63  E-value=1.8e-15  Score=117.39  Aligned_cols=73  Identities=26%  Similarity=0.572  Sum_probs=65.0

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCC-CCCceEeCCEEEcchHHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGG-GLPRVFVGKKYIGGAEEIR  330 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~-TVPQVFVdGe~IGGaDEV~  330 (423)
                      +|+||       .+++|++|. |+.+|+.++|.|+++||+.+.+.+++|.++.+    .. ++|+|||+|++|||+++++
T Consensus         1 ~i~ly-------~~~~Cp~C~~ak~~L~~~~i~~~~i~i~~~~~~~~~~~~~~~----~~~~vP~v~i~g~~igg~~~~~   69 (75)
T cd03418           1 KVEIY-------TKPNCPYCVRAKALLDKKGVDYEEIDVDGDPALREEMINRSG----GRRTVPQIFIGDVHIGGCDDLY   69 (75)
T ss_pred             CEEEE-------eCCCChHHHHHHHHHHHCCCcEEEEECCCCHHHHHHHHHHhC----CCCccCEEEECCEEEeChHHHH
Confidence            58999       678899998 89999999999999999988777777777665    34 8999999999999999999


Q ss_pred             HHHHcC
Q 045109          331 RMHEEG  336 (423)
Q Consensus       331 ~LhEsG  336 (423)
                      +|+++|
T Consensus        70 ~~~~~g   75 (75)
T cd03418          70 ALERKG   75 (75)
T ss_pred             HHHhCc
Confidence            999987

GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i

>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions

Probab=99.60  E-value=4e-15  Score=116.50  Aligned_cols=72  Identities=25%  Similarity=0.532  Sum_probs=64.8

Q ss_pred             CcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHH
Q 045109          252 EKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIR  330 (423)
Q Consensus       252 ~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~  330 (423)
                      ++|+||       .+..|++|. |+++|+.+||.|+++|+..+...+++|.++.+    ..++|+|||||++|||+++++
T Consensus         1 ~~v~ly-------~~~~C~~C~ka~~~L~~~gi~~~~~di~~~~~~~~el~~~~g----~~~vP~v~i~~~~iGg~~~~~   69 (73)
T cd03027           1 GRVTIY-------SRLGCEDCTAVRLFLREKGLPYVEINIDIFPERKAELEERTG----SSVVPQIFFNEKLVGGLTDLK   69 (73)
T ss_pred             CEEEEE-------ecCCChhHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHHhC----CCCcCEEEECCEEEeCHHHHH
Confidence            479999       567899887 99999999999999999988888889888875    468999999999999999999


Q ss_pred             HHHH
Q 045109          331 RMHE  334 (423)
Q Consensus       331 ~LhE  334 (423)
                      +|++
T Consensus        70 ~~~~   73 (73)
T cd03027          70 SLEE   73 (73)
T ss_pred             hhcC
Confidence            9874

GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.

>TIGR02180 GRX_euk Glutaredoxin

Probab=99.60  E-value=2.7e-15  Score=117.73  Aligned_cols=81  Identities=26%  Similarity=0.535  Sum_probs=67.8

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCc--EEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHH
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLGVR--VDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIR  330 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~--yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~  330 (423)
                      |++|       .+++|++|. ++.+|+++++.  |..++|+.+. ...++++.+...++..++|+|||+|++|||++++.
T Consensus         1 V~~f-------~~~~Cp~C~~~~~~L~~~~i~~~~~~~~v~~~~-~~~~~~~~l~~~~g~~~vP~v~i~g~~igg~~~~~   72 (84)
T TIGR02180         1 VVVF-------SKSYCPYCKKAKEILAKLNVKPAYEVVELDQLS-NGSEIQDYLEEITGQRTVPNIFINGKFIGGCSDLL   72 (84)
T ss_pred             CEEE-------ECCCChhHHHHHHHHHHcCCCCCCEEEEeeCCC-ChHHHHHHHHHHhCCCCCCeEEECCEEEcCHHHHH
Confidence            6788       678999888 89999999998  8888887543 24455555555556789999999999999999999


Q ss_pred             HHHHcCchHHHH
Q 045109          331 RMHEEGQLEKVV  342 (423)
Q Consensus       331 ~LhEsGeL~kLL  342 (423)
                      +|+++|+|..+|
T Consensus        73 ~~~~~g~l~~~~   84 (84)
T TIGR02180        73 ALYKSGKLAELL   84 (84)
T ss_pred             HHHHcCChhhhC
Confidence            999999999886

This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.

>KOG0911 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]

Probab=99.57  E-value=1.1e-14  Score=139.44  Aligned_cols=97  Identities=19%  Similarity=0.327  Sum_probs=84.1

Q ss_pred             hhHHHhhhcCCCcEEEEEeCCCCCCC-CCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe
Q 045109          241 NGAVLDHKCGKEKLVVYFTSLRGIRK-TYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV  318 (423)
Q Consensus       241 ~~~~v~~li~~~kVVIYtTSLrGIRK-T~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV  318 (423)
                      ....++.++..++|+||   |+|++. +.|.+.+ +..||+.++|+|..+||..|.+.|+.|+    ..+.|+|+|||||
T Consensus       128 ~~~~l~~lv~a~~v~lF---mKG~p~~P~CGFS~~~v~iL~~~nV~~~~fdIL~DeelRqglK----~fSdWPTfPQlyI  200 (227)
T KOG0911|consen  128 LDNRLEKLVKAKPVMLF---MKGTPEEPKCGFSRQLVGILQSHNVNYTIFDVLTDEELRQGLK----EFSDWPTFPQLYV  200 (227)
T ss_pred             HHHHHHHhcccCeEEEE---ecCCCCcccccccHHHHHHHHHcCCCeeEEeccCCHHHHHHhh----hhcCCCCccceeE
Confidence            34567779999999999   999875 5688776 8999999999999999998865555544    4567999999999


Q ss_pred             CCEEEcchHHHHHHHHcCchHHHHcc
Q 045109          319 GKKYIGGAEEIRRMHEEGQLEKVVEG  344 (423)
Q Consensus       319 dGe~IGGaDEV~~LhEsGeL~kLL~~  344 (423)
                      +|++|||+|.+..||++|+|+..|+.
T Consensus       201 ~GEFiGGlDIl~~m~~~geL~~~l~~  226 (227)
T KOG0911|consen  201 KGEFIGGLDILKEMHEKGELVYTLKE  226 (227)
T ss_pred             CCEeccCcHHHHHHhhcccHHHHhhc
Confidence            99999999999999999999999975

>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain

Probab=99.56  E-value=1e-14  Score=114.47  Aligned_cols=81  Identities=32%  Similarity=0.660  Sum_probs=66.2

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRR  331 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~  331 (423)
                      +|++|       .+.+||.|. |+.+|+.+++.|..++++.+.. ..+++..+...++..++|+|||+|++|||++++.+
T Consensus         1 ~v~~y-------~~~~Cp~C~~~~~~l~~~~~~~~~~~v~~~~~-~~~~~~~~~~~~g~~~~P~v~~~g~~igg~~~~~~   72 (82)
T cd03419           1 PVVVF-------SKSYCPYCKRAKSLLKELGVKPAVVELDQHED-GSEIQDYLQELTGQRTVPNVFIGGKFIGGCDDLMA   72 (82)
T ss_pred             CEEEE-------EcCCCHHHHHHHHHHHHcCCCcEEEEEeCCCC-hHHHHHHHHHHhCCCCCCeEEECCEEEcCHHHHHH
Confidence            58999       678999988 8999999999999888876533 23344444334457799999999999999999999


Q ss_pred             HHHcCchHHH
Q 045109          332 MHEEGQLEKV  341 (423)
Q Consensus       332 LhEsGeL~kL  341 (423)
                      |.++|+|+++
T Consensus        73 ~~~~g~l~~~   82 (82)
T cd03419          73 LHKSGKLVKL   82 (82)
T ss_pred             HHHcCCccCC
Confidence            9999999864

GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes

>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]

Probab=99.55  E-value=1.4e-14  Score=117.70  Aligned_cols=77  Identities=25%  Similarity=0.544  Sum_probs=64.4

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRR  331 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~  331 (423)
                      .|+||       ++++||+|. +|++|+.+||.|+++|+.++..  ++.++.+....|.+|||||||||++|||++++.+
T Consensus         2 ~v~iy-------t~~~CPyC~~ak~~L~~~g~~~~~i~~~~~~~--~~~~~~~~~~~g~~tvP~I~i~~~~igg~~d~~~   72 (80)
T COG0695           2 NVTIY-------TKPGCPYCKRAKRLLDRKGVDYEEIDVDDDEP--EEAREMVKRGKGQRTVPQIFIGGKHVGGCDDLDA   72 (80)
T ss_pred             CEEEE-------ECCCCchHHHHHHHHHHcCCCcEEEEecCCcH--HHHHHHHHHhCCCCCcCEEEECCEEEeCcccHHH
Confidence            58999       678899998 8999999999999999987763  3333333333467899999999999999999999


Q ss_pred             HHHcCch
Q 045109          332 MHEEGQL  338 (423)
Q Consensus       332 LhEsGeL  338 (423)
                      ++..|.|
T Consensus        73 ~~~~~~l   79 (80)
T COG0695          73 LEAKGKL   79 (80)
T ss_pred             HHhhccC
Confidence            9998876

>PF04908 SH3BGR: SH3-binding, glutamic acid-rich protein; InterPro: IPR006993 This family of proteins, which contains SH3BGRL3, is functionally uncharacterised

Probab=99.50  E-value=3.9e-14  Score=120.73  Aligned_cols=91  Identities=26%  Similarity=0.452  Sum_probs=72.0

Q ss_pred             cEEEEEeCCCCCCCCCCcHHHHHHHHHhCCCcEEEEECCCChhhHHHHHHHHc-----CCCCCCCCCceEeCCEEEcchH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKNELKELLG-----DGFSGGGLPRVFVGKKYIGGAE  327 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg-----~~tg~~TVPQVFVdGe~IGGaD  327 (423)
                      .|.||+||+.|.++..-.+..+..||+.++|.|+++||+++.+.|+.|++..+     ...+.+-+||||++++|+|+++
T Consensus         2 ~I~vy~ss~sg~~~ikk~q~~v~~iL~a~kI~fe~vDIa~~e~~r~~mr~~~g~~~~~~~~~~~lpPqiF~~~~Y~Gdye   81 (99)
T PF04908_consen    2 VIKVYISSISGSREIKKRQQRVLMILEAKKIPFEEVDIAMDEEARQWMRENAGPEEKDPGNGKPLPPQIFNGDEYCGDYE   81 (99)
T ss_dssp             SEEEEE-SS-SSHHHHHHHHHHHHHHHHTT--EEEEETTT-HHHHHHHHHHT--CCCS-TSTT--S-EEEETTEEEEEHH
T ss_pred             EEEEEEecccCCHHHHHHHHHHHHHHHHcCCCcEEEeCcCCHHHHHHHHHhccccccCCCCCCCCCCEEEeCCEEEeeHH
Confidence            37899999999888777778899999999999999999999999999999884     1123345589999999999999


Q ss_pred             HHHHHHHcCchHHHHc
Q 045109          328 EIRRMHEEGQLEKVVE  343 (423)
Q Consensus       328 EV~~LhEsGeL~kLL~  343 (423)
                      ++.+++|+|+|...|+
T Consensus        82 ~f~ea~E~~~L~~fL~   97 (99)
T PF04908_consen   82 DFEEANENGELEEFLK   97 (99)
T ss_dssp             HHHHHHCTT-HHHHHT
T ss_pred             HHHHHHhhCHHHHHhC
Confidence            9999999999999986

SH3BGRL3 is a highly conserved small protein, which is widely expressed and shows a significant similarity to glutaredoxin 1 (GRX1) of Escherichia coli which is predicted to belong to the thioredoxin superfamily. However, SH3BGRL3 lacks both conserved cysteine residues, which characterise the enzymatic active site of GRX. This structural feature raises the possibility that SH3BGRL3 and its homologues could function as endogenous modulators of GRX activity []. ; PDB: 1SJ6_A 1U6T_A 1WRY_A 1T1V_B 1J0F_A 2CT6_A.

>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria

Probab=99.48  E-value=1.9e-13  Score=106.53  Aligned_cols=69  Identities=19%  Similarity=0.410  Sum_probs=58.3

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRR  331 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~  331 (423)
                      +|+||       ++++|++|. ||++|+.++|.|+++|++.+. ..++++.+.    +..++|+|||||++|||+++|.+
T Consensus         2 ~v~ly-------s~~~Cp~C~~ak~~L~~~~i~~~~~~v~~~~-~~~~~~~~~----g~~~vP~ifi~g~~igg~~~l~~   69 (72)
T cd03029           2 SVSLF-------TKPGCPFCARAKAALQENGISYEEIPLGKDI-TGRSLRAVT----GAMTVPQVFIDGELIGGSDDLEK   69 (72)
T ss_pred             eEEEE-------ECCCCHHHHHHHHHHHHcCCCcEEEECCCCh-hHHHHHHHh----CCCCcCeEEECCEEEeCHHHHHH
Confidence            68999       678999988 899999999999999998665 344555443    46799999999999999999988


Q ss_pred             HH
Q 045109          332 MH  333 (423)
Q Consensus       332 Lh  333 (423)
                      +.
T Consensus        70 ~l   71 (72)
T cd03029          70 YF   71 (72)
T ss_pred             Hh
Confidence            64

PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.

>TIGR02183 GRXA Glutaredoxin, GrxA family

Probab=99.45  E-value=4.6e-13  Score=109.18  Aligned_cols=74  Identities=19%  Similarity=0.403  Sum_probs=61.3

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCC-----CcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchH
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLG-----VRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAE  327 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~g-----V~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaD  327 (423)
                      |+||       ++++||+|. |+++|+.++     +.|+++|+..+...+++|.++.+.  +..+||||||||++|||++
T Consensus         2 V~vy-------s~~~Cp~C~~ak~~L~~~~~~~~~i~~~~idi~~~~~~~~~l~~~~g~--~~~tVP~ifi~g~~igG~~   72 (86)
T TIGR02183         2 VVIF-------GRPGCPYCVRAKQLAEKLAIERADFEFRYIDIHAEGISKADLEKTVGK--PVETVPQIFVDEKHVGGCT   72 (86)
T ss_pred             EEEE-------eCCCCccHHHHHHHHHHhCcccCCCcEEEEECCCCHHHHHHHHHHhCC--CCCCcCeEEECCEEecCHH
Confidence            7899       678999998 999999984     679999997655556778777653  2369999999999999999


Q ss_pred             HHHHHHHcC
Q 045109          328 EIRRMHEEG  336 (423)
Q Consensus       328 EV~~LhEsG  336 (423)
                      +|.+|++++
T Consensus        73 dl~~~~~~~   81 (86)
T TIGR02183        73 DFEQLVKEN   81 (86)
T ss_pred             HHHHHHHhc
Confidence            999998764

This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.

>PRK11200 grxA glutaredoxin 1; Provisional

Probab=99.45  E-value=5.6e-13  Score=107.41  Aligned_cols=74  Identities=19%  Similarity=0.322  Sum_probs=63.6

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHh-----CCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcch
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKG-----LGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGA  326 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~-----~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGa  326 (423)
                      +|+||       .+++|++|. |+++|+.     .+|.|+++|+..+...+++|+++.+.  +..++|||||||++|||+
T Consensus         2 ~v~iy-------~~~~C~~C~~a~~~L~~l~~~~~~i~~~~idi~~~~~~~~el~~~~~~--~~~~vP~ifi~g~~igg~   72 (85)
T PRK11200          2 FVVIF-------GRPGCPYCVRAKELAEKLSEERDDFDYRYVDIHAEGISKADLEKTVGK--PVETVPQIFVDQKHIGGC   72 (85)
T ss_pred             EEEEE-------eCCCChhHHHHHHHHHhhcccccCCcEEEEECCCChHHHHHHHHHHCC--CCCcCCEEEECCEEEcCH
Confidence            58999       678999988 9999999     79999999998776667888887753  346999999999999999


Q ss_pred             HHHHHHHHc
Q 045109          327 EEIRRMHEE  335 (423)
Q Consensus       327 DEV~~LhEs  335 (423)
                      ++|.++++.
T Consensus        73 ~~~~~~~~~   81 (85)
T PRK11200         73 TDFEAYVKE   81 (85)
T ss_pred             HHHHHHHHH
Confidence            999998753

>TIGR02190 GlrX-dom Glutaredoxin-family domain

Probab=99.45  E-value=5.3e-13  Score=106.71  Aligned_cols=73  Identities=27%  Similarity=0.461  Sum_probs=60.9

Q ss_pred             hcCCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcch
Q 045109          248 KCGKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGA  326 (423)
Q Consensus       248 li~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGa  326 (423)
                      .-.+++|+||       .+++|++|. +|++|+.+||.|+++|++.+.. .+++.++    ++..++|+|||||++|||+
T Consensus         4 ~~~~~~V~ly-------~~~~Cp~C~~ak~~L~~~gi~y~~idi~~~~~-~~~~~~~----~g~~~vP~i~i~g~~igG~   71 (79)
T TIGR02190         4 ARKPESVVVF-------TKPGCPFCAKAKATLKEKGYDFEEIPLGNDAR-GRSLRAV----TGATTVPQVFIGGKLIGGS   71 (79)
T ss_pred             cCCCCCEEEE-------ECCCCHhHHHHHHHHHHcCCCcEEEECCCChH-HHHHHHH----HCCCCcCeEEECCEEEcCH
Confidence            3468899999       788999998 8999999999999999975533 3455543    3567999999999999999


Q ss_pred             HHHHHH
Q 045109          327 EEIRRM  332 (423)
Q Consensus       327 DEV~~L  332 (423)
                      ++|.++
T Consensus        72 ~~l~~~   77 (79)
T TIGR02190        72 DELEAY   77 (79)
T ss_pred             HHHHHH
Confidence            999875

This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.

>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain

Probab=99.45  E-value=6.2e-13  Score=99.41  Aligned_cols=71  Identities=32%  Similarity=0.692  Sum_probs=62.6

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRR  331 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~  331 (423)
                      +|+||       .+++|+.|. ++.+|+.+++.|.++|+..+.+.+++|+++.+    ..++|+||+||++|||++++++
T Consensus         1 ~v~ly-------~~~~Cp~C~~~~~~L~~~~i~~~~~di~~~~~~~~~l~~~~~----~~~~P~~~~~~~~igg~~~~~~   69 (72)
T cd02066           1 KVVVF-------SKSTCPYCKRAKRLLESLGIEFEEIDILEDGELREELKELSG----WPTVPQIFINGEFIGGYDDLKA   69 (72)
T ss_pred             CEEEE-------ECCCCHHHHHHHHHHHHcCCcEEEEECCCCHHHHHHHHHHhC----CCCcCEEEECCEEEecHHHHHH
Confidence            58999       567799888 89999999999999999988877788887765    4699999999999999999999


Q ss_pred             HHH
Q 045109          332 MHE  334 (423)
Q Consensus       332 LhE  334 (423)
                      |++
T Consensus        70 ~~~   72 (72)
T cd02066          70 LHE   72 (72)
T ss_pred             hhC
Confidence            874

GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which

>PRK12759 bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta; Provisional

Probab=99.36  E-value=2.7e-12  Score=131.91  Aligned_cols=89  Identities=18%  Similarity=0.279  Sum_probs=74.2

Q ss_pred             CcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHc-----CCCCCCCCCceEeCCEEEcc
Q 045109          252 EKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLG-----DGFSGGGLPRVFVGKKYIGG  325 (423)
Q Consensus       252 ~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg-----~~tg~~TVPQVFVdGe~IGG  325 (423)
                      .+|+||       ++++||+|. +|++|+.+||.|+++||+.+.. ..++.+.++     ..+|..|||||||||++|||
T Consensus         2 ~~V~vy-------s~~~Cp~C~~aK~~L~~~gi~~~~idi~~~~~-~~~~~~~~~~~~~~~~~g~~tvP~ifi~~~~igG   73 (410)
T PRK12759          2 VEVRIY-------TKTNCPFCDLAKSWFGANDIPFTQISLDDDVK-RAEFYAEVNKNILLVEEHIRTVPQIFVGDVHIGG   73 (410)
T ss_pred             CcEEEE-------eCCCCHHHHHHHHHHHHCCCCeEEEECCCChh-HHHHHHHHhhccccccCCCCccCeEEECCEEEeC
Confidence            369999       678999998 8999999999999999986553 334444332     34678899999999999999


Q ss_pred             hHHHHHHHHcCchHHHHcccccccC
Q 045109          326 AEEIRRMHEEGQLEKVVEGCEMIDD  350 (423)
Q Consensus       326 aDEV~~LhEsGeL~kLL~~~~~~~~  350 (423)
                      ++++++  .+|+|.++|++.+..+.
T Consensus        74 f~~l~~--~~g~l~~~~~~~~~~~~   96 (410)
T PRK12759         74 YDNLMA--RAGEVIARVKGSSLTTF   96 (410)
T ss_pred             chHHHH--HhCCHHHHhcCCccccc
Confidence            999988  99999999999876643

>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors

Probab=99.28  E-value=1.4e-11  Score=93.07  Aligned_cols=59  Identities=34%  Similarity=0.555  Sum_probs=53.4

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEE
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYI  323 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~I  323 (423)
                      |+||       .+..|+.|. ++++|+.+||+|+++||+.+.+.+++|+++.+    ..++|+|||||++|
T Consensus         1 V~vy-------~~~~C~~C~~~~~~L~~~~i~y~~~dv~~~~~~~~~l~~~~g----~~~~P~v~i~g~~I   60 (60)
T PF00462_consen    1 VVVY-------TKPGCPYCKKAKEFLDEKGIPYEEVDVDEDEEAREELKELSG----VRTVPQVFIDGKFI   60 (60)
T ss_dssp             EEEE-------ESTTSHHHHHHHHHHHHTTBEEEEEEGGGSHHHHHHHHHHHS----SSSSSEEEETTEEE
T ss_pred             cEEE-------EcCCCcCHHHHHHHHHHcCCeeeEcccccchhHHHHHHHHcC----CCccCEEEECCEEC
Confidence            7899       568899888 89999999999999999998888999999874    56999999999997

Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....

>TIGR02194 GlrX_NrdH Glutaredoxin-like protein NrdH

Probab=98.95  E-value=1.7e-09  Score=84.76  Aligned_cols=63  Identities=17%  Similarity=0.261  Sum_probs=53.1

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCE-EEcchHH
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKK-YIGGAEE  328 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe-~IGGaDE  328 (423)
                      |+||       .+..|++|. ++++|+.++|.|+++||..+...++++++ +|    ..+||+|||+|. +|||++.
T Consensus         1 v~ly-------~~~~Cp~C~~ak~~L~~~~i~~~~~di~~~~~~~~~~~~-~g----~~~vP~v~~~g~~~~~G~~~   65 (72)
T TIGR02194         1 ITVY-------SKNNCVQCKMTKKALEEHGIAFEEINIDEQPEAIDYVKA-QG----FRQVPVIVADGDLSWSGFRP   65 (72)
T ss_pred             CEEE-------eCCCCHHHHHHHHHHHHCCCceEEEECCCCHHHHHHHHH-cC----CcccCEEEECCCcEEeccCH
Confidence            5789       678899988 89999999999999999988877777764 23    468999999775 9999875

NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.

>PRK10329 glutaredoxin-like protein; Provisional

Probab=98.89  E-value=5.3e-09  Score=85.17  Aligned_cols=64  Identities=16%  Similarity=0.259  Sum_probs=55.3

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEE  328 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDE  328 (423)
                      +|+||       .+++|++|. +|.+|+.+||.|+++||+.+++..++++. .    |..+||+|+|++..|+|++.
T Consensus         2 ~v~lY-------t~~~Cp~C~~ak~~L~~~gI~~~~idi~~~~~~~~~~~~-~----g~~~vPvv~i~~~~~~Gf~~   66 (81)
T PRK10329          2 RITIY-------TRNDCVQCHATKRAMESRGFDFEMINVDRVPEAAETLRA-Q----GFRQLPVVIAGDLSWSGFRP   66 (81)
T ss_pred             EEEEE-------eCCCCHhHHHHHHHHHHCCCceEEEECCCCHHHHHHHHH-c----CCCCcCEEEECCEEEecCCH
Confidence            68999       678999998 89999999999999999988777766654 2    35699999999999999875

>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family

Probab=98.61  E-value=3e-07  Score=69.09  Aligned_cols=65  Identities=28%  Similarity=0.521  Sum_probs=54.7

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEE  328 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDE  328 (423)
                      +|+||       ...+|+.|. ++.+|+..++.|.++|++.+....+++.++.+    ..++|.++++|+.++|++.
T Consensus         1 ~i~lf-------~~~~C~~C~~~~~~l~~~~i~~~~vdi~~~~~~~~~~~~~~~----~~~vP~~~~~~~~~~g~~~   66 (74)
T TIGR02196         1 KVKVY-------TTPWCPPCKKAKEYLTSKGIAFEEIDVEKDSAAREEVLKVLG----QRGVPVIVIGHKIIVGFDP   66 (74)
T ss_pred             CEEEE-------cCCCChhHHHHHHHHHHCCCeEEEEeccCCHHHHHHHHHHhC----CCcccEEEECCEEEeeCCH
Confidence            47899       678899888 89999999999999999877766777777765    4589999999999988754

This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.

>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile

Probab=98.53  E-value=4.6e-07  Score=68.13  Aligned_cols=65  Identities=25%  Similarity=0.394  Sum_probs=54.2

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEE  328 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDE  328 (423)
                      +|++|       ...+|++|. ++.+|+..++.|..+|++.+....++++++.    +..++|.|+++|+.|+|.+.
T Consensus         1 ~v~l~-------~~~~c~~c~~~~~~l~~~~i~~~~~~i~~~~~~~~~~~~~~----~~~~vP~i~~~~~~i~g~~~   66 (73)
T cd02976           1 EVTVY-------TKPDCPYCKATKRFLDERGIPFEEVDVDEDPEALEELKKLN----GYRSVPVVVIGDEHLSGFRP   66 (73)
T ss_pred             CEEEE-------eCCCChhHHHHHHHHHHCCCCeEEEeCCCCHHHHHHHHHHc----CCcccCEEEECCEEEecCCH
Confidence            47889       567898886 8999999999999999987776677777654    24589999999999999875

In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou

>KOG4023 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.16  E-value=3.6e-06  Score=72.67  Aligned_cols=95  Identities=17%  Similarity=0.167  Sum_probs=80.5

Q ss_pred             cEEEEEeCCCCCCCCCCcHHHHHHHHHhCCCcEEEEECCCChhhHHHHHHHHc----CCCCCCCCCceEeCCEEEcchHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKNELKELLG----DGFSGGGLPRVFVGKKYIGGAEE  328 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg----~~tg~~TVPQVFVdGe~IGGaDE  328 (423)
                      .|.||++|..|.+.+.-....+..+|+...|.++++|+.+....+..+...+.    ...|....||||-+.+|.|++|.
T Consensus         3 ~irvyvasssg~~eik~kqqevv~~Ld~~ki~fk~~di~~~e~~~~~~~~~~~~e~r~~~GnplPPqifn~d~Y~Gdye~   82 (108)
T KOG4023|consen    3 VIRVYVASSSGSTEIKKKQQEVVRFLDANKIGFKEIDITAYEEVRQWMDNNVPDEKRPLNGNPLPPQIFNGDQYCGDYEL   82 (108)
T ss_pred             ceEEEEecCCCchHHHhhhhhhhhhhhcccCCcceeeccchhhhHHHHHhcCChhhcCCCCCCCCcccccCccccccHHH
Confidence            47899999999887766666799999999999999999887777777766653    23566789999999999999999


Q ss_pred             HHHHHHcCchHHHHccccc
Q 045109          329 IRRMHEEGQLEKVVEGCEM  347 (423)
Q Consensus       329 V~~LhEsGeL~kLL~~~~~  347 (423)
                      +.+..|++.|.+.|.-++.
T Consensus        83 F~ea~E~ntl~eFL~lap~  101 (108)
T KOG4023|consen   83 FFEAVEQNTLQEFLGLAPP  101 (108)
T ss_pred             HHHHHHHHHHHHHHccCCC
Confidence            9999999999999987664

>TIGR02200 GlrX_actino Glutaredoxin-like protein

Probab=98.03  E-value=3.6e-05  Score=59.15  Aligned_cols=65  Identities=17%  Similarity=0.300  Sum_probs=49.6

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe-CCEEEcchH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV-GKKYIGGAE  327 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV-dGe~IGGaD  327 (423)
                      +|+||       ..++|+.|. ++.+|+.+++.|+.+|++.+....++++++-.   +..++|+|++ +|+.+....
T Consensus         1 ~v~ly-------~~~~C~~C~~~~~~L~~~~~~~~~idi~~~~~~~~~~~~~~~---~~~~vP~i~~~~g~~l~~~~   67 (77)
T TIGR02200         1 TITVY-------GTTWCGYCAQLMRTLDKLGAAYEWVDIEEDEGAADRVVSVNN---GNMTVPTVKFADGSFLTNPS   67 (77)
T ss_pred             CEEEE-------ECCCChhHHHHHHHHHHcCCceEEEeCcCCHhHHHHHHHHhC---CCceeCEEEECCCeEecCCC
Confidence            47899       567899887 89999999999999999866665566655521   3468999977 667776554

This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.

>cd02973 TRX_GRX_like Thioredoxin (TRX)-Glutaredoxin (GRX)-like family; composed of archaeal and bacterial proteins that show similarity to both TRX and GRX, including the C-terminal TRX-fold subdomain of Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO)

Probab=97.93  E-value=2.3e-05  Score=59.71  Aligned_cols=58  Identities=12%  Similarity=0.153  Sum_probs=43.7

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhC-----CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcc
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGL-----GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGG  325 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~-----gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGG  325 (423)
                      +|+||       .+++|+.|. ++.+|+.+     +|.|..+|++.+.    ++.+.++    ..++|+|+|+|++++-
T Consensus         2 ~v~~f-------~~~~C~~C~~~~~~l~~l~~~~~~i~~~~id~~~~~----~l~~~~~----i~~vPti~i~~~~~~~   65 (67)
T cd02973           2 NIEVF-------VSPTCPYCPDAVQAANRIAALNPNISAEMIDAAEFP----DLADEYG----VMSVPAIVINGKVEFV   65 (67)
T ss_pred             EEEEE-------ECCCCCCcHHHHHHHHHHHHhCCceEEEEEEcccCH----hHHHHcC----CcccCEEEECCEEEEe
Confidence            57898       567899887 78888865     6889999986442    4555544    4589999999998863

All members contain a redox-active CXXC motif and may function as PDOs. The archaeal proteins Mj0307 and Mt807 show structures more similar to GRX, but activities more similar to TRX. Some members of the family are similar to PfPDO in that they contain a second CXXC motif located in a second TRX-fold subdomain at the N-terminus; the superimposable N- and C-terminal TRX subdomains form a compact structure. PfPDO is postulated to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI). The C-terminal CXXC motif of PfPDO is required for its oxidase, reductase and isomerase activities. Also included in the family is the C-terminal TRX-fold subdomain of the N-terminal domain (NTD) of bacteri

>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2

Probab=97.58  E-value=0.00055  Score=53.44  Aligned_cols=67  Identities=19%  Similarity=0.203  Sum_probs=51.7

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeC----CEEEcchH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVG----KKYIGGAE  327 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVd----Ge~IGGaD  327 (423)
                      +|.||       ....|++|. |+.+|+.+||.|++++++.  ..+.+++  +   .+..+||.++++    |..|....
T Consensus         1 ~i~Ly-------~~~~~p~c~kv~~~L~~~gi~y~~~~~~~--~~~~~~~--~---~~~~~vP~l~~~~~~~~~~l~eS~   66 (77)
T cd03040           1 KITLY-------QYKTCPFCCKVRAFLDYHGIPYEVVEVNP--VSRKEIK--W---SSYKKVPILRVESGGDGQQLVDSS   66 (77)
T ss_pred             CEEEE-------EcCCCHHHHHHHHHHHHCCCceEEEECCc--hhHHHHH--H---hCCCccCEEEECCCCCccEEEcHH
Confidence            57889       556799988 8999999999999999853  3445552  2   235689999987    78888888


Q ss_pred             HHHHHH
Q 045109          328 EIRRMH  333 (423)
Q Consensus       328 EV~~Lh  333 (423)
                      .+.+..
T Consensus        67 ~I~~yL   72 (77)
T cd03040          67 VIISTL   72 (77)
T ss_pred             HHHHHH
Confidence            887643

Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.

>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=97.46  E-value=0.00056  Score=49.70  Aligned_cols=64  Identities=16%  Similarity=0.075  Sum_probs=48.5

Q ss_pred             CCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHHH
Q 045109          265 RKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRM  332 (423)
Q Consensus       265 RKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~L  332 (423)
                      ....|++|. ++.+|+.++|.|+.++++.......++.+    .++..++|.|+++|..+++...+.+.
T Consensus         5 ~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~P~l~~~~~~~~es~~I~~y   69 (71)
T cd00570           5 YFPGSPRSLRVRLALEEKGLPYELVPVDLGEGEQEEFLA----LNPLGKVPVLEDGGLVLTESLAILEY   69 (71)
T ss_pred             eCCCCccHHHHHHHHHHcCCCcEEEEeCCCCCCCHHHHh----cCCCCCCCEEEECCEEEEcHHHHHHH
Confidence            456688776 89999999999999998755433333333    34567999999999999999887653

In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma

>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins

Probab=97.38  E-value=0.0015  Score=51.59  Aligned_cols=69  Identities=17%  Similarity=0.111  Sum_probs=51.8

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCEEEcchHHHH
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKKYIGGAEEIR  330 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe~IGGaDEV~  330 (423)
                      ++||       ....|++|. |+.+|+.+||.|++++++.+.....++.++-    +..+||.+-.  +|..|.+...+.
T Consensus         2 ~~Ly-------~~~~sp~~~kv~~~L~~~gi~y~~~~v~~~~~~~~~~~~~~----p~~~vP~l~~~~~~~~l~es~~I~   70 (77)
T cd03041           2 LELY-------EFEGSPFCRLVREVLTELELDVILYPCPKGSPKRDKFLEKG----GKVQVPYLVDPNTGVQMFESADIV   70 (77)
T ss_pred             ceEe-------cCCCCchHHHHHHHHHHcCCcEEEEECCCChHHHHHHHHhC----CCCcccEEEeCCCCeEEEcHHHHH
Confidence            5788       556798776 8999999999999999975444456665432    3468999876  367888888887


Q ss_pred             HHH
Q 045109          331 RMH  333 (423)
Q Consensus       331 ~Lh  333 (423)
                      +..
T Consensus        71 ~yL   73 (77)
T cd03041          71 KYL   73 (77)
T ss_pred             HHH
Confidence            744

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.

>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E

Probab=97.27  E-value=0.0013  Score=50.66  Aligned_cols=63  Identities=11%  Similarity=0.085  Sum_probs=47.3

Q ss_pred             CCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeC-CEEEcchHHHHHHH
Q 045109          265 RKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVG-KKYIGGAEEIRRMH  333 (423)
Q Consensus       265 RKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVd-Ge~IGGaDEV~~Lh  333 (423)
                      ....|++|. ||.+|..+||.|+.+.++....  ....+.    .+..++|.|+++ |..+++...+.+..
T Consensus         5 ~~~~~p~~~rvr~~L~~~gl~~~~~~~~~~~~--~~~~~~----~~~~~vP~L~~~~~~~l~es~aI~~yL   69 (71)
T cd03037           5 IYEHCPFCVKARMIAGLKNIPVEQIILQNDDE--ATPIRM----IGAKQVPILEKDDGSFMAESLDIVAFI   69 (71)
T ss_pred             ecCCCcHhHHHHHHHHHcCCCeEEEECCCCch--HHHHHh----cCCCccCEEEeCCCeEeehHHHHHHHH
Confidence            345799887 8999999999999998874321  122222    234689999997 99999999987744

coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.

>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx

Probab=96.96  E-value=0.0013  Score=55.22  Aligned_cols=46  Identities=24%  Similarity=0.289  Sum_probs=40.6

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcC
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGD  306 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~  306 (423)
                      |+||       .++.|+.|+ ++++|+.+||.|+++|+..++...++|.++++.
T Consensus         1 i~iY-------~~~~C~~c~ka~~~L~~~~i~~~~idi~~~~~~~~~l~~~~~~   47 (105)
T cd02977           1 ITIY-------GNPNCSTSRKALAWLEEHGIEYEFIDYLKEPPTKEELKELLAK   47 (105)
T ss_pred             CEEE-------ECCCCHHHHHHHHHHHHcCCCcEEEeeccCCCCHHHHHHHHHh
Confidence            5789       678899888 899999999999999998778888899998864

ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.

>cd03036 ArsC_like Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC

Probab=96.93  E-value=0.0014  Score=56.20  Aligned_cols=46  Identities=26%  Similarity=0.312  Sum_probs=40.4

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcC
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGD  306 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~  306 (423)
                      |.||       ..+.|+.|+ ++++|+.+||.|+++|+..++..++||.+.++.
T Consensus         1 i~iY-------~~~~C~~c~ka~~~L~~~~i~~~~idi~~~~~~~~el~~~~~~   47 (111)
T cd03036           1 LKFY-------EYPKCSTCRKAKKWLDEHGVDYTAIDIVEEPPSKEELKKWLEK   47 (111)
T ss_pred             CEEE-------ECCCCHHHHHHHHHHHHcCCceEEecccCCcccHHHHHHHHHH
Confidence            5789       667899888 899999999999999998888888999888763

Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.

>cd03055 GST_N_Omega GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=96.86  E-value=0.0056  Score=49.90  Aligned_cols=71  Identities=11%  Similarity=0.138  Sum_probs=53.6

Q ss_pred             CCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeC-CEEEcchH
Q 045109          250 GKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVG-KKYIGGAE  327 (423)
Q Consensus       250 ~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVd-Ge~IGGaD  327 (423)
                      ..+.+.||       ....|++|. ++.+|+.+|+.|+.+++++.. ..+++.+.    ....++|.+.++ |..|....
T Consensus        15 ~~~~~~Ly-------~~~~sp~~~kv~~~L~~~gl~~~~~~v~~~~-~~~~~~~~----np~~~vPvL~~~~g~~l~eS~   82 (89)
T cd03055          15 VPGIIRLY-------SMRFCPYAQRARLVLAAKNIPHEVININLKD-KPDWFLEK----NPQGKVPALEIDEGKVVYESL   82 (89)
T ss_pred             CCCcEEEE-------eCCCCchHHHHHHHHHHcCCCCeEEEeCCCC-CcHHHHhh----CCCCCcCEEEECCCCEEECHH
Confidence            36779999       456799887 899999999999999987542 22344443    234689999998 88888887


Q ss_pred             HHHHH
Q 045109          328 EIRRM  332 (423)
Q Consensus       328 EV~~L  332 (423)
                      .+.+.
T Consensus        83 aI~~y   87 (89)
T cd03055          83 IICEY   87 (89)
T ss_pred             HHHHh
Confidence            77654

The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega

>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E

Probab=96.77  E-value=0.0077  Score=46.04  Aligned_cols=64  Identities=22%  Similarity=0.230  Sum_probs=47.3

Q ss_pred             CCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHHHH
Q 045109          265 RKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRMH  333 (423)
Q Consensus       265 RKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~Lh  333 (423)
                      ....|++|. ++.+|+..|+.|++++++.. ....++.+..    ...++|.+..+|..|.....+.+..
T Consensus         5 ~~~~~~~~~~v~~~l~~~gi~~~~~~v~~~-~~~~~~~~~~----p~~~vP~l~~~~~~l~es~aI~~yL   69 (73)
T cd03059           5 SGPDDVYSHRVRIVLAEKGVSVEIIDVDPD-NPPEDLAELN----PYGTVPTLVDRDLVLYESRIIMEYL   69 (73)
T ss_pred             ECCCChhHHHHHHHHHHcCCccEEEEcCCC-CCCHHHHhhC----CCCCCCEEEECCEEEEcHHHHHHHH
Confidence            456798777 89999999999999988754 2234555532    2458999988888888877776643

coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.

>PRK01655 spxA transcriptional regulator Spx; Reviewed

Probab=96.63  E-value=0.004  Score=55.19  Aligned_cols=46  Identities=15%  Similarity=0.283  Sum_probs=40.9

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcC
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGD  306 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~  306 (423)
                      |+||       ....|+.|+ |+++|+.+||.|+++|+..++..++||.+.+..
T Consensus         2 i~iY-------~~~~C~~C~ka~~~L~~~gi~~~~idi~~~~~~~~eL~~~l~~   48 (131)
T PRK01655          2 VTLF-------TSPSCTSCRKAKAWLEEHDIPFTERNIFSSPLTIDEIKQILRM   48 (131)
T ss_pred             EEEE-------eCCCChHHHHHHHHHHHcCCCcEEeeccCChhhHHHHHHHHHH
Confidence            7899       677899887 899999999999999998888889999888763

>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs

Probab=96.43  E-value=0.015  Score=44.92  Aligned_cols=62  Identities=19%  Similarity=0.243  Sum_probs=46.4

Q ss_pred             CCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeC-CEEEcchHHHHH
Q 045109          265 RKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVG-KKYIGGAEEIRR  331 (423)
Q Consensus       265 RKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVd-Ge~IGGaDEV~~  331 (423)
                      ...+|++|. ++.+|+.+|+.|+.+++++.. ...++.+.    ....+||.+..+ |..|.....+.+
T Consensus         5 ~~~~~p~~~rv~~~L~~~gl~~e~~~v~~~~-~~~~~~~~----np~~~vP~L~~~~g~~l~eS~aI~~   68 (71)
T cd03060           5 SFRRCPYAMRARMALLLAGITVELREVELKN-KPAEMLAA----SPKGTVPVLVLGNGTVIEESLDIMR   68 (71)
T ss_pred             ecCCCcHHHHHHHHHHHcCCCcEEEEeCCCC-CCHHHHHH----CCCCCCCEEEECCCcEEecHHHHHH
Confidence            456899987 899999999999999987642 23455443    234699999996 888877766654

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r

>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S

Probab=96.20  E-value=0.017  Score=43.69  Aligned_cols=63  Identities=17%  Similarity=0.167  Sum_probs=44.1

Q ss_pred             CCCCCcHHH-HHHHHHhCCCcEEEEECCCCh--hhHHHHHHHHcCCCCCCCCCceEe-CCEEEcchHHHHH
Q 045109          265 RKTYEDCCH-VRVILKGLGVRVDERDLSMHS--GFKNELKELLGDGFSGGGLPRVFV-GKKYIGGAEEIRR  331 (423)
Q Consensus       265 RKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~--~~reEL~~lLg~~tg~~TVPQVFV-dGe~IGGaDEV~~  331 (423)
                      ...+|++|. ++.+|+.+++.|+.+.++...  ....++.+.    ....++|.+.+ +|..+.....+.+
T Consensus         5 ~~~~s~~~~~~~~~L~~~~l~~~~~~v~~~~~~~~~~~~~~~----~p~~~vP~l~~~~~~~l~es~aI~~   71 (74)
T cd03051           5 DSPTAPNPRRVRIFLAEKGIDVPLVTVDLAAGEQRSPEFLAK----NPAGTVPVLELDDGTVITESVAICR   71 (74)
T ss_pred             eCCCCcchHHHHHHHHHcCCCceEEEeecccCccCCHHHHhh----CCCCCCCEEEeCCCCEEecHHHHHH
Confidence            456788776 899999999999998886532  223444443    23468999998 6667776666654

cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.

>TIGR01617 arsC_related transcriptional regulator, Spx/MgsR family

Probab=96.19  E-value=0.01  Score=51.14  Aligned_cols=46  Identities=22%  Similarity=0.320  Sum_probs=39.9

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcC
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGD  306 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~  306 (423)
                      |.||       ....|+.|+ |+++|+.+||.|+++|+..++..+++|.+++..
T Consensus         1 i~iY-------~~~~C~~c~ka~~~L~~~~i~~~~idi~~~~~~~~el~~l~~~   47 (117)
T TIGR01617         1 IKVY-------GSPNCTTCKKARRWLEANGIEYQFIDIGEDGPTREELLDILSL   47 (117)
T ss_pred             CEEE-------eCCCCHHHHHHHHHHHHcCCceEEEecCCChhhHHHHHHHHHH
Confidence            4688       567899887 899999999999999998888888999888763

This model represents a portion of the proteins within the larger set covered by Pfam model pfam03960. That larger family includes a glutaredoxin-dependent arsenate reductase (TIGR00014). Characterized members of this family include Spx and MgsR from Bacillus subtili. Spx is a global regulator for response to thiol-specific oxidative stress. It interacts with RNA polymerase. MgsR (modulator of the general stress response, also called YqgZ) provides a second level of regulation for more than a third of the proteins in the B. subtilis general stress regulon controlled by Sigma-B.

>cd03032 ArsC_Spx Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes

Probab=96.13  E-value=0.014  Score=50.19  Aligned_cols=45  Identities=27%  Similarity=0.412  Sum_probs=39.6

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHc
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLG  305 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg  305 (423)
                      |.||       ....|+.|+ |+++|+.+||.|+.+|+..++..++||.+.+.
T Consensus         2 i~iY-------~~~~C~~c~ka~~~L~~~gi~~~~idi~~~~~~~~el~~~~~   47 (115)
T cd03032           2 IKLY-------TSPSCSSCRKAKQWLEEHQIPFEERNLFKQPLTKEELKEILS   47 (115)
T ss_pred             EEEE-------eCCCCHHHHHHHHHHHHCCCceEEEecCCCcchHHHHHHHHH
Confidence            6789       567899887 99999999999999999888888889988876

It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.

>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins

Probab=96.08  E-value=0.057  Score=41.70  Aligned_cols=57  Identities=19%  Similarity=0.158  Sum_probs=45.9

Q ss_pred             CCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHHHHH
Q 045109          266 KTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRMHE  334 (423)
Q Consensus       266 KT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~LhE  334 (423)
                      -++|++|. ++.+|+.+||.|+.++++...            ......+|.+.++|+.|.+...+.+..+
T Consensus        13 ~s~sp~~~~v~~~L~~~~i~~~~~~~~~~~------------~~p~g~vP~l~~~g~~l~es~~I~~yL~   70 (72)
T cd03054          13 PSLSPECLKVETYLRMAGIPYEVVFSSNPW------------RSPTGKLPFLELNGEKIADSEKIIEYLK   70 (72)
T ss_pred             CCCCHHHHHHHHHHHhCCCceEEEecCCcc------------cCCCcccCEEEECCEEEcCHHHHHHHHh
Confidence            36799887 899999999999999987431            2234589999999999999988877543

Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.

>PRK12559 transcriptional regulator Spx; Provisional

Probab=96.06  E-value=0.013  Score=52.17  Aligned_cols=46  Identities=22%  Similarity=0.330  Sum_probs=40.8

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcC
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGD  306 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~  306 (423)
                      |+||       ..+.|+.|+ ++++|+.+||.|+++|+..++...+||.+.+..
T Consensus         2 i~iY-------~~~~C~~crkA~~~L~~~gi~~~~~di~~~~~s~~el~~~l~~   48 (131)
T PRK12559          2 VVLY-------TTASCASCRKAKAWLEENQIDYTEKNIVSNSMTVDELKSILRL   48 (131)
T ss_pred             EEEE-------eCCCChHHHHHHHHHHHcCCCeEEEEeeCCcCCHHHHHHHHHH
Confidence            7899       567899887 899999999999999998888889999998863

>PRK13344 spxA transcriptional regulator Spx; Reviewed

Probab=96.05  E-value=0.015  Score=51.87  Aligned_cols=46  Identities=17%  Similarity=0.306  Sum_probs=40.3

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcC
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGD  306 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~  306 (423)
                      |.||       ..+.|+.|+ ++++|+.+||.|+++|+..++.-++||.+.+..
T Consensus         2 i~iY-------~~~~C~~crkA~~~L~~~~i~~~~~d~~~~~~s~~eL~~~l~~   48 (132)
T PRK13344          2 IKIY-------TISSCTSCKKAKTWLNAHQLSYKEQNLGKEPLTKEEILAILTK   48 (132)
T ss_pred             EEEE-------eCCCCHHHHHHHHHHHHcCCCeEEEECCCCCCCHHHHHHHHHH
Confidence            6799       567899887 899999999999999998888888999888753

>PF05768 DUF836: Glutaredoxin-like domain (DUF836); InterPro: IPR008554 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors

Probab=95.89  E-value=0.046  Score=44.18  Aligned_cols=52  Identities=25%  Similarity=0.406  Sum_probs=39.3

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhC----CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCC
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGL----GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGK  320 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~----gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdG  320 (423)
                      +|++|       ++..|.-|. ++.+|+..    .+.++++||+.+.    +|.++.+     ..+|.|+++|
T Consensus         1 ~l~l~-------~k~~C~LC~~a~~~L~~~~~~~~~~l~~vDI~~d~----~l~~~Y~-----~~IPVl~~~~   57 (81)
T PF05768_consen    1 TLTLY-------TKPGCHLCDEAKEILEEVAAEFPFELEEVDIDEDP----ELFEKYG-----YRIPVLHIDG   57 (81)
T ss_dssp             -EEEE-------E-SSSHHHHHHHHHHHHCCTTSTCEEEEEETTTTH----HHHHHSC-----TSTSEEEETT
T ss_pred             CEEEE-------cCCCCChHHHHHHHHHHHHhhcCceEEEEECCCCH----HHHHHhc-----CCCCEEEEcC
Confidence            47899       678899777 89999865    4678999998443    4666665     3799999999

Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This family contains several viral glutaredoxins, and many related bacterial and eukaryotic proteins of unknown function. The best characterised member of this family is G4L (P68460 from SWISSPROT) from Vaccinia virus (strain Western Reserve/WR) (VACV), which is necessary for virion morphogenesis and virus replication []. This is a cytomplasmic protein which functions as a shuttle in a redox pathway between membrane-associated E10R and L1R or F9L []. ; PDB: 1TTZ_A 1XPV_A 2FGX_A 2G2Q_C 1WJK_A.

>TIGR00411 redox_disulf_1 small redox-active disulfide protein 1

Probab=95.79  E-value=0.043  Score=42.58  Aligned_cols=54  Identities=11%  Similarity=0.249  Sum_probs=35.7

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHH----hCC--CcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCE
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILK----GLG--VRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKK  321 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~----~~g--V~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe  321 (423)
                      .|+||       ..++|+.|. ++.+|+    .++  +.+..+|+..+.    ++.+.+    +-.++|.++|+|+
T Consensus         2 ~v~~f-------~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~vd~~~~~----~~~~~~----~v~~vPt~~~~g~   62 (82)
T TIGR00411         2 KIELF-------TSPTCPYCPAAKRVVEEVAKEMGDAVEVEYINVMENP----QKAMEY----GIMAVPAIVINGD   62 (82)
T ss_pred             EEEEE-------ECCCCcchHHHHHHHHHHHHHhcCceEEEEEeCccCH----HHHHHc----CCccCCEEEECCE
Confidence            47788       568999887 666664    345  556677765332    333333    3457999999996

This protein is homologous to a family of proteins that includes thioredoxins, glutaredoxins, protein-disulfide isomerases, and others, some of which have several such domains. The sequence of this protein at the redox-active disufide site, CPYC, matches glutaredoxins rather than thioredoxins, although its overall sequence seems closer to thioredoxins. It is suggested to be a ribonucleotide-reducing system component distinct from thioredoxin or glutaredoxin.

>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A

Probab=95.76  E-value=0.031  Score=43.84  Aligned_cols=64  Identities=14%  Similarity=0.150  Sum_probs=50.5

Q ss_pred             CCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHHHH
Q 045109          265 RKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRMH  333 (423)
Q Consensus       265 RKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~Lh  333 (423)
                      ...+|++|. |+-+|+.+||.|+..++..... ..++.++-    ...+||.+..+|..|.+...+.+..
T Consensus         3 ~~~~Sp~~~kv~~~l~~~~i~~~~~~v~~~~~-~~~~~~~~----p~~~vPvL~~~g~~l~dS~~I~~yL   67 (75)
T PF13417_consen    3 GFPGSPYSQKVRLALEEKGIPYELVPVDPEEK-RPEFLKLN----PKGKVPVLVDDGEVLTDSAAIIEYL   67 (75)
T ss_dssp             EETTSHHHHHHHHHHHHHTEEEEEEEEBTTST-SHHHHHHS----TTSBSSEEEETTEEEESHHHHHHHH
T ss_pred             CcCCChHHHHHHHHHHHcCCeEEEeccCcccc-hhHHHhhc----ccccceEEEECCEEEeCHHHHHHHH
Confidence            346799887 8999999999999999875432 45555543    3569999999999999999887743

...

>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC

Probab=95.67  E-value=0.021  Score=48.84  Aligned_cols=46  Identities=20%  Similarity=0.174  Sum_probs=40.0

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcC
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGD  306 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~  306 (423)
                      |+||       ..+.|+-|+ ++++|+.+||.|+++|+..++--.+||.+++..
T Consensus         1 i~iy-------~~~~C~~crka~~~L~~~~i~~~~~di~~~p~s~~eL~~~l~~   47 (105)
T cd03035           1 ITLY-------GIKNCDTVKKARKWLEARGVAYTFHDYRKDGLDAATLERWLAK   47 (105)
T ss_pred             CEEE-------eCCCCHHHHHHHHHHHHcCCCeEEEecccCCCCHHHHHHHHHH
Confidence            5788       567898776 999999999999999998888889999998863

The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.

>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs

Probab=95.65  E-value=0.037  Score=41.99  Aligned_cols=63  Identities=19%  Similarity=0.292  Sum_probs=45.4

Q ss_pred             CCCCCcHHH-HHHHHHhCCCcEEEEECCCChh--hHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHH
Q 045109          265 RKTYEDCCH-VRVILKGLGVRVDERDLSMHSG--FKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRR  331 (423)
Q Consensus       265 RKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~--~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~  331 (423)
                      ....|++|. ++.+|+..|+.|+++++++...  ...++.+.    ....++|.+..+|..|.....+.+
T Consensus         5 ~~~~~~~~~~v~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~----~p~~~vP~l~~~~~~i~es~aI~~   70 (73)
T cd03056           5 GFPLSGNCYKVRLLLALLGIPYEWVEVDILKGETRTPEFLAL----NPNGEVPVLELDGRVLAESNAILV   70 (73)
T ss_pred             eCCCCccHHHHHHHHHHcCCCcEEEEecCCCcccCCHHHHHh----CCCCCCCEEEECCEEEEcHHHHHH
Confidence            345687665 8999999999999999875321  23444442    234589999999998887777654

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.

>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=95.56  E-value=0.046  Score=41.94  Aligned_cols=64  Identities=17%  Similarity=0.233  Sum_probs=45.7

Q ss_pred             CCCCCcHHH-HHHHHHhCCCcEEEEECCCChh--hHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHHH
Q 045109          265 RKTYEDCCH-VRVILKGLGVRVDERDLSMHSG--FKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRM  332 (423)
Q Consensus       265 RKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~--~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~L  332 (423)
                      ....|++|. ++.+|+.+|+.|+.+.+++...  ...++.+.    ....++|.+.++|..|-....+.+.
T Consensus         5 ~~~~~~~~~~v~~~l~~~gi~~e~~~i~~~~~~~~~~~~~~~----~p~~~vP~l~~~~~~l~es~aI~~y   71 (74)
T cd03045           5 YLPGSPPCRAVLLTAKALGLELNLKEVNLMKGEHLKPEFLKL----NPQHTVPTLVDNGFVLWESHAILIY   71 (74)
T ss_pred             eCCCCCcHHHHHHHHHHcCCCCEEEEecCccCCcCCHHHHhh----CcCCCCCEEEECCEEEEcHHHHHHH
Confidence            456688765 8999999999999998875322  23455543    2345899999998887777766553

GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.

>PF13192 Thioredoxin_3: Thioredoxin domain; PDB: 1ZYP_B 1ZYN_A 1HYU_A 1ILO_A 1J08_F 2YWM_B 2AYT_B 2HLS_B 1A8L_A 2K8S_B

Probab=95.49  E-value=0.055  Score=43.06  Aligned_cols=52  Identities=19%  Similarity=0.359  Sum_probs=34.8

Q ss_pred             CCcHHH-----HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCE--EEcchHH
Q 045109          268 YEDCCH-----VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKK--YIGGAEE  328 (423)
Q Consensus       268 ~c~Cc~-----VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe--~IGGaDE  328 (423)
                      .|++|.     ++.++..+++.++.+|+. +   .+++ ..+    |-.++|.++|||+  +.|..-.
T Consensus         9 ~C~~C~~~~~~~~~~~~~~~i~~ei~~~~-~---~~~~-~~y----gv~~vPalvIng~~~~~G~~p~   67 (76)
T PF13192_consen    9 GCPYCPELVQLLKEAAEELGIEVEIIDIE-D---FEEI-EKY----GVMSVPALVINGKVVFVGRVPS   67 (76)
T ss_dssp             SCTTHHHHHHHHHHHHHHTTEEEEEEETT-T---HHHH-HHT----T-SSSSEEEETTEEEEESS--H
T ss_pred             CCCCcHHHHHHHHHHHHhcCCeEEEEEcc-C---HHHH-HHc----CCCCCCEEEECCEEEEEecCCC
Confidence            398886     466778889999999873 2   3455 333    3468999999997  4563433

...

>cd02975 PfPDO_like_N Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO)-like family, N-terminal TRX-fold subdomain; composed of proteins with similarity to PfPDO, a redox active thermostable protein believed to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI), which are both involved in oxidative protein folding

Probab=95.35  E-value=0.11  Score=44.49  Aligned_cols=61  Identities=20%  Similarity=0.311  Sum_probs=41.1

Q ss_pred             HHhhhcCCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCC-----CcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceE
Q 045109          244 VLDHKCGKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLG-----VRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVF  317 (423)
Q Consensus       244 ~v~~li~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~g-----V~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVF  317 (423)
                      +.+.+.....||||+      ..++|+.|. ++.+|+...     |.+..+|++..    .++.+.++    -.++|.++
T Consensus        15 ~~~~l~~~~~vvv~f------~a~wC~~C~~~~~~l~~la~~~~~i~~~~vd~d~~----~~l~~~~~----v~~vPt~~   80 (113)
T cd02975          15 FFKEMKNPVDLVVFS------SKEGCQYCEVTKQLLEELSELSDKLKLEIYDFDED----KEKAEKYG----VERVPTTI   80 (113)
T ss_pred             HHHHhCCCeEEEEEe------CCCCCCChHHHHHHHHHHHHhcCceEEEEEeCCcC----HHHHHHcC----CCcCCEEE
Confidence            344455566688885      468998777 777776443     67888888643    35555544    46899999


Q ss_pred             e
Q 045109          318 V  318 (423)
Q Consensus       318 V  318 (423)
                      |
T Consensus        81 i   81 (113)
T cd02975          81 F   81 (113)
T ss_pred             E
Confidence            8

PfPDO contains two redox active CXXC motifs in two contiguous TRX-fold subdomains. The active site in the N-terminal TRX-fold subdomain is required for isomerase but not for reductase activity of PfPDO. The exclusive presence of PfPDO-like proteins in extremophiles may suggest that they have a special role in adaptation to extreme conditions.

>PLN03165 chaperone protein dnaJ-related; Provisional

Probab=95.34  E-value=0.015  Score=51.12  Aligned_cols=53  Identities=25%  Similarity=0.609  Sum_probs=40.5

Q ss_pred             CccccccCccceEeCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCcccCCCCC
Q 045109          356 VGACEACGDVRFVPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLTRCPICC  422 (423)
Q Consensus       356 ~~~C~~CGG~rfVpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLirCp~C~  422 (423)
                      ...|..|.|.+...|..|+|+-.+...-         +     .......+|+.|+-.|.+.|+.|-
T Consensus        41 ~v~C~~C~GsG~~~C~~C~G~G~v~~~~---------~-----g~~q~~~~C~~C~G~Gk~~C~~C~   93 (111)
T PLN03165         41 TQPCFPCSGTGAQVCRFCVGSGNVTVEL---------G-----GGEKEVSKCINCDGAGSLTCTTCQ   93 (111)
T ss_pred             CCCCCCCCCCCCcCCCCCcCcCeEEEEe---------C-----CcEEEEEECCCCCCcceeeCCCCC
Confidence            4569999999999999999997665431         0     011235799999999999999993

>cd03033 ArsC_15kD Arsenate Reductase (ArsC) family, 15kD protein subfamily; composed of proteins of unknown function with similarity to thioredoxin-fold arsenic reductases, ArsC

Probab=95.20  E-value=0.039  Score=48.00  Aligned_cols=46  Identities=24%  Similarity=0.369  Sum_probs=39.8

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcC
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGD  306 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~  306 (423)
                      |+||       ..+.|+-|+ ++++|+.+||.|+++|+..++--.+||.+.+..
T Consensus         2 i~iy-------~~p~C~~crkA~~~L~~~gi~~~~~d~~~~p~s~~eL~~~l~~   48 (113)
T cd03033           2 IIFY-------EKPGCANNARQKALLEAAGHEVEVRDLLTEPWTAETLRPFFGD   48 (113)
T ss_pred             EEEE-------ECCCCHHHHHHHHHHHHcCCCcEEeehhcCCCCHHHHHHHHHH
Confidence            7899       556798776 999999999999999998888888999998863

It is encoded by an ORF present in a gene cluster associated with nitrogen fixation that also encodes dinitrogenase reductase ADP-ribosyltransferase (DRAT) and dinitrogenase reductase activating glycohydrolase (DRAG). ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via glutaredoxin, through a single catalytic cysteine.

>TIGR01295 PedC_BrcD bacteriocin transport accessory protein, putative

Probab=95.05  E-value=0.22  Score=43.52  Aligned_cols=70  Identities=13%  Similarity=0.096  Sum_probs=43.4

Q ss_pred             CCCcEEEEEeCCCCCCCCCCcHHH-----HHHHHHhCCCcEEEEECCCCh----h---hHHHHHHHHcCCCCCCCCCceE
Q 045109          250 GKEKLVVYFTSLRGIRKTYEDCCH-----VRVILKGLGVRVDERDLSMHS----G---FKNELKELLGDGFSGGGLPRVF  317 (423)
Q Consensus       250 ~~~kVVIYtTSLrGIRKT~c~Cc~-----VK~LL~~~gV~yeErDVsmd~----~---~reEL~~lLg~~tg~~TVPQVF  317 (423)
                      ....++||+      .+++||.|+     ++.+.+..++.+..+|++.+.    .   ...++++.++..++-..+|.++
T Consensus        22 ~~~~~iv~f------~~~~Cp~C~~~~P~l~~~~~~~~~~~y~vdvd~~~~~~~~~~~~~~~~~~~~~i~~~i~~~PT~v   95 (122)
T TIGR01295        22 KKETATFFI------GRKTCPYCRKFSGTLSGVVAQTKAPIYYIDSENNGSFEMSSLNDLTAFRSRFGIPTSFMGTPTFV   95 (122)
T ss_pred             cCCcEEEEE------ECCCChhHHHHhHHHHHHHHhcCCcEEEEECCCccCcCcccHHHHHHHHHHcCCcccCCCCCEEE
Confidence            345567775      578999987     367777778889999997543    1   1234444444323334578765


Q ss_pred             --eCCEEEcc
Q 045109          318 --VGKKYIGG  325 (423)
Q Consensus       318 --VdGe~IGG  325 (423)
                        -+|+.++.
T Consensus        96 ~~k~Gk~v~~  105 (122)
T TIGR01295        96 HITDGKQVSV  105 (122)
T ss_pred             EEeCCeEEEE
Confidence              58865543

This model describes a small family of proteins believed to aid in the export of various class II bacteriocins, which are ribosomally-synthesized, non-lantibiotic bacterial peptide antibiotics. Members of this family are found in operons for pediocin PA-1 from Pediococcus acidilactici and brochocin-C from Brochothrix campestris.

>TIGR00412 redox_disulf_2 small redox-active disulfide protein 2

Probab=94.83  E-value=0.14  Score=40.88  Aligned_cols=48  Identities=21%  Similarity=0.300  Sum_probs=35.2

Q ss_pred             CCCcHHH-H----HHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEE
Q 045109          267 TYEDCCH-V----RVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYI  323 (423)
Q Consensus       267 T~c~Cc~-V----K~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~I  323 (423)
                      ++|+.|. +    +++++.+++.++..+|+ +   .+++.+     .+-.++|.|+|||+.+
T Consensus         8 ~~C~~C~~~~~~~~~~~~e~~~~~~~~~v~-~---~~~a~~-----~~v~~vPti~i~G~~~   60 (76)
T TIGR00412         8 TGCANCQMTEKNVKKAVEELGIDAEFEKVT-D---MNEILE-----AGVTATPGVAVDGELV   60 (76)
T ss_pred             CCCcCHHHHHHHHHHHHHHcCCCeEEEEeC-C---HHHHHH-----cCCCcCCEEEECCEEE
Confidence            7898776 4    77888999999998886 2   223322     2346899999999655

This small protein is found in three archaeal species so far (Methanococcus jannaschii, Archeoglobus fulgidus, and Methanobacterium thermoautotrophicum) as well as in Anabaena PCC7120. It is homologous to thioredoxins, glutaredoxins, and protein disulfide isomerases, and shares with them a redox-active disulfide. The redox active disulfide region CXXC motif resembles neither thioredoxin nor glutaredoxin. A closely related protein found in the same three Archaea, described by redox_disulf_1, has a glutaredoxin-like CP[YH]C sequence; it has been characterized in functional assays as redox-active but unlikely to be a thioredoxin or glutaredoxin.

>cd03026 AhpF_NTD_C TRX-GRX-like family, Alkyl hydroperoxide reductase F subunit (AhpF) N-terminal domain (NTD) subfamily, C-terminal TRX-fold subdomain; AhpF is a homodimeric flavoenzyme which catalyzes the NADH-dependent reduction of the peroxiredoxin AhpC, which then reduces hydrogen peroxide and organic hydroperoxides

Probab=94.80  E-value=0.083  Score=43.82  Aligned_cols=62  Identities=18%  Similarity=0.209  Sum_probs=41.0

Q ss_pred             hcCCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHh----C-CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCE
Q 045109          248 KCGKEKLVVYFTSLRGIRKTYEDCCH-VRVILKG----L-GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKK  321 (423)
Q Consensus       248 li~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~----~-gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe  321 (423)
                      +-+.=.|.+|++       ++|++|. ++.+++.    + +|.|..+|++..    .++.+.++    -..+|.++|||+
T Consensus        10 l~~pv~i~~F~~-------~~C~~C~~~~~~~~~l~~~~~~i~~~~vd~~~~----~e~a~~~~----V~~vPt~vidG~   74 (89)
T cd03026          10 LNGPINFETYVS-------LSCHNCPDVVQALNLMAVLNPNIEHEMIDGALF----QDEVEERG----IMSVPAIFLNGE   74 (89)
T ss_pred             cCCCEEEEEEEC-------CCCCCcHHHHHHHHHHHHHCCCceEEEEEhHhC----HHHHHHcC----CccCCEEEECCE
Confidence            334446788843       6788776 5555543    3 689999998633    23444443    347999999998


Q ss_pred             EEc
Q 045109          322 YIG  324 (423)
Q Consensus       322 ~IG  324 (423)
                      .++
T Consensus        75 ~~~   77 (89)
T cd03026          75 LFG   77 (89)
T ss_pred             EEE
Confidence            765

AhpF contains an NTD containing two contiguous TRX-fold subdomains similar to Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). It also contains a catalytic core similar to TRX reductase containing FAD and NADH binding domains with an active site disulfide. The proposed mechanism of action of AhpF is similar to a TRX/TRX reductase system. The flow of reducing equivalents goes from NADH - catalytic core of AhpF - NTD of AhpF - AhpC - peroxide substrates. The catalytic CXXC motif of the NTD of AhpF is contained in its C-terminal TRX subdomain.

>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs

Probab=94.69  E-value=0.37  Score=37.72  Aligned_cols=55  Identities=18%  Similarity=0.232  Sum_probs=44.0

Q ss_pred             CCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHHHH
Q 045109          267 TYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRMH  333 (423)
Q Consensus       267 T~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~Lh  333 (423)
                      +++++|. |+.+|+..|+.|+.+.+++.            ......++|.+-.+|+.|.....+.+..
T Consensus        15 ~~sp~~~~v~~~L~~~gi~~~~~~~~~~------------~~~p~g~vPvl~~~g~~l~eS~~I~~yL   70 (75)
T cd03080          15 SLSPFCLKVETFLRMAGIPYENKFGGLA------------KRSPKGKLPFIELNGEKIADSELIIDHL   70 (75)
T ss_pred             CCCHHHHHHHHHHHHCCCCcEEeecCcc------------cCCCCCCCCEEEECCEEEcCHHHHHHHH
Confidence            4678887 89999999999998888631            2334568999999999999998887743

Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele

>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins

Probab=94.53  E-value=0.18  Score=38.95  Aligned_cols=69  Identities=20%  Similarity=0.234  Sum_probs=49.7

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChh--hHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHH
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSG--FKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIR  330 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~--~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~  330 (423)
                      +.+|       ....|++|. ++-+|...|+.|+.+.+++...  ..+++.+.    ....++|.+..+|..|.....+.
T Consensus         2 ~~Ly-------~~~~s~~s~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~----~P~~~vP~l~~~g~~l~es~aI~   70 (76)
T cd03053           2 LKLY-------GAAMSTCVRRVLLCLEEKGVDYELVPVDLTKGEHKSPEHLAR----NPFGQIPALEDGDLKLFESRAIT   70 (76)
T ss_pred             eEEE-------eCCCChhHHHHHHHHHHcCCCcEEEEeCccccccCCHHHHhh----CCCCCCCEEEECCEEEEcHHHHH
Confidence            4677       556788876 8999999999999988875321  12344432    23458999999998888888777


Q ss_pred             HHH
Q 045109          331 RMH  333 (423)
Q Consensus       331 ~Lh  333 (423)
                      +..
T Consensus        71 ~yL   73 (76)
T cd03053          71 RYL   73 (76)
T ss_pred             HHH
Confidence            654

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t

>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=94.40  E-value=0.11  Score=39.42  Aligned_cols=62  Identities=15%  Similarity=0.193  Sum_probs=44.4

Q ss_pred             CCCcHHH-HHHHHHhCCCcEEEEECCCChh--hHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHHH
Q 045109          267 TYEDCCH-VRVILKGLGVRVDERDLSMHSG--FKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRM  332 (423)
Q Consensus       267 T~c~Cc~-VK~LL~~~gV~yeErDVsmd~~--~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~L  332 (423)
                      ..++|+. ++.+|+.+||.|+.+.+++...  ...++.+.    ....++|.+..+|..|.....+.+.
T Consensus         7 ~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~----~p~~~vP~l~~~~~~l~es~aI~~y   71 (73)
T cd03042           7 FRSSASYRVRIALNLKGLDYEYVPVNLLKGEQLSPAYRAL----NPQGLVPTLVIDGLVLTQSLAIIEY   71 (73)
T ss_pred             CCCcchHHHHHHHHHcCCCCeEEEecCccCCcCChHHHHh----CCCCCCCEEEECCEEEEcHHHHHHH
Confidence            4567765 8999999999999988876322  23455543    2346899999999888777766553

The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.

>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=94.08  E-value=0.35  Score=37.77  Aligned_cols=61  Identities=20%  Similarity=0.276  Sum_probs=44.0

Q ss_pred             CCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHHHH
Q 045109          268 YEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRMH  333 (423)
Q Consensus       268 ~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~Lh  333 (423)
                      .++++. ++-+|...|+.|+.+.++.+ ....++.    ......+||.+..+|..|.....+.+..
T Consensus         9 ~~~~~~~v~~~L~~~~i~~e~~~v~~~-~~~~~~~----~~~p~~~vP~l~~~~~~l~es~aI~~yL   70 (73)
T cd03076           9 VRGRAEAIRLLLADQGISWEEERVTYE-EWQESLK----PKMLFGQLPCFKDGDLTLVQSNAILRHL   70 (73)
T ss_pred             CcchHHHHHHHHHHcCCCCEEEEecHH-Hhhhhhh----ccCCCCCCCEEEECCEEEEcHHHHHHHH
Confidence            467775 89999999999999988642 2222222    2333468999999999888888776643

The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w

>PHA02125 thioredoxin-like protein

Probab=93.88  E-value=0.21  Score=39.49  Aligned_cols=53  Identities=15%  Similarity=0.235  Sum_probs=33.8

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEE
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKY  322 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~  322 (423)
                      |++|       ..++|+.|+ ++.+|+...  +...+|+.+.  ..++.+.++    -..+|.+. +|+.
T Consensus         2 iv~f-------~a~wC~~Ck~~~~~l~~~~--~~~~~vd~~~--~~~l~~~~~----v~~~PT~~-~g~~   55 (75)
T PHA02125          2 IYLF-------GAEWCANCKMVKPMLANVE--YTYVDVDTDE--GVELTAKHH----IRSLPTLV-NTST   55 (75)
T ss_pred             EEEE-------ECCCCHhHHHHHHHHHHHh--heEEeeeCCC--CHHHHHHcC----CceeCeEE-CCEE
Confidence            6777       568999887 788998654  4445554332  236666554    35799876 6653

>COG1393 ArsC Arsenate reductase and related proteins, glutaredoxin family [Inorganic ion transport and metabolism]

Probab=93.20  E-value=0.19  Score=44.26  Aligned_cols=47  Identities=19%  Similarity=0.296  Sum_probs=39.3

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcC
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGD  306 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~  306 (423)
                      .|.||       .-+.|.-|+ |+++|+.+||.|.++|+..++--+++|.+.+..
T Consensus         2 ~itiy-------~~p~C~t~rka~~~L~~~gi~~~~~~y~~~~~s~~eL~~~l~~   49 (117)
T COG1393           2 MITIY-------GNPNCSTCRKALAWLEEHGIEYTFIDYLKTPPSREELKKILSK   49 (117)
T ss_pred             eEEEE-------eCCCChHHHHHHHHHHHcCCCcEEEEeecCCCCHHHHHHHHHH
Confidence            37899       445688666 999999999999999998788888999888753

>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins

Probab=92.91  E-value=0.68  Score=39.21  Aligned_cols=64  Identities=19%  Similarity=0.253  Sum_probs=48.1

Q ss_pred             CCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHHHHH
Q 045109          266 KTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRMHE  334 (423)
Q Consensus       266 KT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~LhE  334 (423)
                      +..|++|. ++-+|..+||.|+..++++... -+.+.++ .   ....||.+..+|..|.....+.+..+
T Consensus        19 ~g~cpf~~rvrl~L~eKgi~ye~~~vd~~~~-p~~~~~~-n---P~g~vPvL~~~~~~i~eS~~I~eYLd   83 (91)
T cd03061          19 IGNCPFCQRLFMVLWLKGVVFNVTTVDMKRK-PEDLKDL-A---PGTQPPFLLYNGEVKTDNNKIEEFLE   83 (91)
T ss_pred             CCCChhHHHHHHHHHHCCCceEEEEeCCCCC-CHHHHHh-C---CCCCCCEEEECCEEecCHHHHHHHHH
Confidence            46799887 9999999999999999876532 1333332 2   23589999999999999888877543

They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI

>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=92.89  E-value=0.62  Score=36.00  Aligned_cols=64  Identities=16%  Similarity=0.022  Sum_probs=44.3

Q ss_pred             CCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHHH
Q 045109          265 RKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRM  332 (423)
Q Consensus       265 RKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~L  332 (423)
                      .-..|++|. ++-+|+..|+.|+.++++.. ....++.+. ..  ...++|.+-.+|.-|.....+.+.
T Consensus         5 ~~~~sp~~~~v~~~l~~~gl~~~~~~~~~~-~~~~~~~~~-~p--~~~~vP~l~~~~~~l~eS~aI~~y   69 (74)
T cd03058           5 GAWASPFVLRVRIALALKGVPYEYVEEDLG-NKSELLLAS-NP--VHKKIPVLLHNGKPICESLIIVEY   69 (74)
T ss_pred             ECCCCchHHHHHHHHHHcCCCCEEEEeCcc-cCCHHHHHh-CC--CCCCCCEEEECCEEeehHHHHHHH
Confidence            345688776 89999999999999988653 112333332 21  125899998888888877777664

The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,

>COG3019 Predicted metal-binding protein [General function prediction only]

Probab=92.70  E-value=0.7  Score=42.74  Aligned_cols=77  Identities=25%  Similarity=0.339  Sum_probs=58.1

Q ss_pred             CCCcEEEEEeCCCCCCCCCCcHHHH-HHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcc---
Q 045109          250 GKEKLVVYFTSLRGIRKTYEDCCHV-RVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGG---  325 (423)
Q Consensus       250 ~~~kVVIYtTSLrGIRKT~c~Cc~V-K~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGG---  325 (423)
                      ..-++++|       ..+.|.||.. -+.|+..|..+...+.+    ....|+++++-.....+-=...|||.||-|   
T Consensus        24 ~~~~~~vy-------ksPnCGCC~~w~~~mk~~Gf~Vk~~~~~----d~~alK~~~gIp~e~~SCHT~VI~Gy~vEGHVP   92 (149)
T COG3019          24 QATEMVVY-------KSPNCGCCDEWAQHMKANGFEVKVVETD----DFLALKRRLGIPYEMQSCHTAVINGYYVEGHVP   92 (149)
T ss_pred             ceeeEEEE-------eCCCCccHHHHHHHHHhCCcEEEEeecC----cHHHHHHhcCCChhhccccEEEEcCEEEeccCC
Confidence            35678889       7789999995 78889999887777653    356788888755444566788999999988   


Q ss_pred             hHHHHHHHHcCc
Q 045109          326 AEEIRRMHEEGQ  337 (423)
Q Consensus       326 aDEV~~LhEsGe  337 (423)
                      ++.|.+|.+++.
T Consensus        93 a~aI~~ll~~~p  104 (149)
T COG3019          93 AEAIARLLAEKP  104 (149)
T ss_pred             HHHHHHHHhCCC
Confidence            466766666555

>TIGR01616 nitro_assoc nitrogenase-associated protein

Probab=92.68  E-value=0.24  Score=44.07  Aligned_cols=47  Identities=19%  Similarity=0.295  Sum_probs=38.7

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcC
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGD  306 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~  306 (423)
                      .|+||       ....|+-|+ ++++|+.+||.|+++|+-.++--.+||+..+..
T Consensus         2 ~i~iY-------~~p~Cst~RKA~~~L~~~gi~~~~~d~~~~p~t~~eL~~~l~~   49 (126)
T TIGR01616         2 TIIFY-------EKPGCANNARQKAALKASGHDVEVQDILKEPWHADTLRPYFGN   49 (126)
T ss_pred             eEEEE-------eCCCCHHHHHHHHHHHHCCCCcEEEeccCCCcCHHHHHHHHHH
Confidence            36788       456688666 999999999999999998777778888888763

This model describes a small family of uncharacterized proteins found so far in alpha and gamma proteobacteria and in Nostoc sp. PCC 7120, a cyanobacterium. The gene for this protein is associated with nitrogenase genes. This family shows sequence similarity to TIGR00014, a glutaredoxin-dependent arsenate reductase that converts arsentate to arsenite for disposal. This family is one of several included in Pfam model pfam03960.

>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor

Probab=92.28  E-value=0.54  Score=37.41  Aligned_cols=64  Identities=14%  Similarity=0.114  Sum_probs=45.4

Q ss_pred             CCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeC-CEEEcchHHHHHHH
Q 045109          267 TYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVG-KKYIGGAEEIRRMH  333 (423)
Q Consensus       267 T~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVd-Ge~IGGaDEV~~Lh  333 (423)
                      .++++|. ++-+|..+||.|+.+.+++...  +.....+ .......+|.+..+ |+.|.+...+.+..
T Consensus        14 ~~Sp~~~kv~~~L~~~~i~~~~~~~~~~~~--~~~~~~~-~~~p~~~vP~L~~~~~~~l~eS~aI~~yL   79 (84)
T cd03038          14 AFSPNVWKTRLALNHKGLEYKTVPVEFPDI--PPILGEL-TSGGFYTVPVIVDGSGEVIGDSFAIAEYL   79 (84)
T ss_pred             CcCChhHHHHHHHHhCCCCCeEEEecCCCc--ccccccc-cCCCCceeCeEEECCCCEEeCHHHHHHHH
Confidence            5677776 8999999999999988864321  1222222 23345689999888 89998888887753

This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.

>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells

Probab=92.26  E-value=0.69  Score=36.49  Aligned_cols=63  Identities=22%  Similarity=0.298  Sum_probs=44.1

Q ss_pred             CCCCcHH-HHHHHHHhCCCcEEEEECCCChh-h-HHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHHH
Q 045109          266 KTYEDCC-HVRVILKGLGVRVDERDLSMHSG-F-KNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRM  332 (423)
Q Consensus       266 KT~c~Cc-~VK~LL~~~gV~yeErDVsmd~~-~-reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~L  332 (423)
                      -..|+++ +|+-+|+.+|+.|+.+.+++... . ..++.++-    ...+||.+..+|..|.....+.+.
T Consensus         6 ~~~s~~s~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~in----P~g~vP~L~~~g~~l~Es~aI~~y   71 (73)
T cd03052           6 WTQSFSSQKVRLVIAEKGLRCEEYDVSLPLSEHNEPWFMRLN----PTGEVPVLIHGDNIICDPTQIIDY   71 (73)
T ss_pred             CCCCccHHHHHHHHHHcCCCCEEEEecCCcCccCCHHHHHhC----cCCCCCEEEECCEEEEcHHHHHHH
Confidence            3456555 58999999999999988865332 2 23455432    345899999999888877776553

More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.

>TIGR00014 arsC arsenate reductase (glutaredoxin)

Probab=92.17  E-value=0.29  Score=42.30  Aligned_cols=46  Identities=13%  Similarity=0.236  Sum_probs=38.4

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcC
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGD  306 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~  306 (423)
                      |.||       ....|+-|+ ++++|+.+|+.|+++|+...+--.+||..++..
T Consensus         1 i~iy-------~~~~C~t~rkA~~~L~~~~i~~~~~di~~~p~t~~el~~~l~~   47 (114)
T TIGR00014         1 VTIY-------HNPRCSKSRNTLALLEDKGIEPEVVKYLKNPPTKSELEAIFAK   47 (114)
T ss_pred             CEEE-------ECCCCHHHHHHHHHHHHCCCCeEEEeccCCCcCHHHHHHHHHH
Confidence            4688       456788666 999999999999999998777778899888863

composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate.

>PRK10853 putative reductase; Provisional

Probab=92.00  E-value=0.35  Score=42.41  Aligned_cols=46  Identities=15%  Similarity=0.190  Sum_probs=38.7

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcC
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGD  306 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~  306 (423)
                      |.||       ....|.-|+ |+++|+.+||.|+.+|+-.++--.+||.+.+..
T Consensus         2 i~iy-------~~~~C~t~rkA~~~L~~~~i~~~~~d~~k~p~s~~eL~~~l~~   48 (118)
T PRK10853          2 VTLY-------GIKNCDTIKKARRWLEAQGIDYRFHDYRVDGLDSELLQGFIDE   48 (118)
T ss_pred             EEEE-------cCCCCHHHHHHHHHHHHcCCCcEEeehccCCcCHHHHHHHHHH
Confidence            6788       456688666 999999999999999998777778899998863

>cd02953 DsbDgamma DsbD gamma family; DsbD gamma is the C-terminal periplasmic domain of the bacterial protein DsbD

Probab=91.85  E-value=0.7  Score=37.85  Aligned_cols=61  Identities=18%  Similarity=0.210  Sum_probs=35.2

Q ss_pred             hcCCCc-EEEEEeCCCCCCCCCCcHHH-HHHHH-------HhC--CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCce
Q 045109          248 KCGKEK-LVVYFTSLRGIRKTYEDCCH-VRVIL-------KGL--GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRV  316 (423)
Q Consensus       248 li~~~k-VVIYtTSLrGIRKT~c~Cc~-VK~LL-------~~~--gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQV  316 (423)
                      .+.+++ |+||+      ..++|+.|. +...+       +.+  ++.+..+|++.+.....++.+.++    ..++|.+
T Consensus         7 ~~~~~k~vlv~f------~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~----i~~~Pti   76 (104)
T cd02953           7 ALAQGKPVFVDF------TADWCVTCKVNEKVVFSDPEVQAALKKDVVLLRADWTKNDPEITALLKRFG----VFGPPTY   76 (104)
T ss_pred             HHHcCCeEEEEE------EcchhHHHHHHHHHhcCCHHHHHHHhCCeEEEEEecCCCCHHHHHHHHHcC----CCCCCEE
Confidence            333444 56665      358999887 33222       111  566777777654443456666664    3579977


Q ss_pred             Ee
Q 045109          317 FV  318 (423)
Q Consensus       317 FV  318 (423)
                      +|
T Consensus        77 ~~   78 (104)
T cd02953          77 LF   78 (104)
T ss_pred             EE
Confidence            65

It contains a CXXC motif in a TRX fold and shuttles the reducing potential from the membrane domain (DsbD beta) to the N-terminal periplasmic domain (DsbD alpha). DsbD beta, a transmembrane domain comprising of eight helices, acquires its reducing potential from the cytoplasmic thioredoxin. DsbD alpha transfers the acquired reducing potential from DsbD gamma to target proteins such as the periplasmic protein disulphide isomerases, DsbC and DsbG. This flow of reducing potential from the cytoplasm through DsbD allows DsbC and DsbG to act as isomerases in the oxidizing environment of the bacterial periplasm. DsbD also transfers reducing potential from the cytoplasm to specific reductases in the periplasm which are involved in the maturation of cytochromes.

>cd03034 ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli

Probab=91.80  E-value=0.34  Score=41.66  Aligned_cols=45  Identities=18%  Similarity=0.270  Sum_probs=37.0

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHc
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLG  305 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg  305 (423)
                      |.||       ....|+-|+ ++++|+.+++.|+++|+..++--.+||...+.
T Consensus         1 i~iy-------~~~~C~t~rkA~~~L~~~~i~~~~~di~~~~~t~~el~~~l~   46 (112)
T cd03034           1 ITIY-------HNPRCSKSRNALALLEEAGIEPEIVEYLKTPPTAAELRELLA   46 (112)
T ss_pred             CEEE-------ECCCCHHHHHHHHHHHHCCCCeEEEecccCCcCHHHHHHHHH
Confidence            4688       455688666 99999999999999999777777888888775

E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.

>PRK10026 arsenate reductase; Provisional

Probab=91.72  E-value=0.35  Score=44.08  Aligned_cols=47  Identities=13%  Similarity=0.215  Sum_probs=39.6

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcC
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGD  306 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~  306 (423)
                      .|.||       ..+.|.-|+ ++++|+.+|+.|+++|+-.++--.+||+..+..
T Consensus         3 ~i~iY-------~~p~Cst~RKA~~wL~~~gi~~~~~d~~~~ppt~~eL~~~l~~   50 (141)
T PRK10026          3 NITIY-------HNPACGTSRNTLEMIRNSGTEPTIIHYLETPPTRDELVKLIAD   50 (141)
T ss_pred             EEEEE-------eCCCCHHHHHHHHHHHHCCCCcEEEeeeCCCcCHHHHHHHHHh
Confidence            47889       456788666 999999999999999998788788999988863

>PRK10387 glutaredoxin 2; Provisional

Probab=91.61  E-value=0.72  Score=42.02  Aligned_cols=64  Identities=13%  Similarity=0.102  Sum_probs=45.9

Q ss_pred             CCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCce-EeCCEEEcchHHHHHHHH
Q 045109          265 RKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRV-FVGKKYIGGAEEIRRMHE  334 (423)
Q Consensus       265 RKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQV-FVdGe~IGGaDEV~~LhE  334 (423)
                      ....|++|. |+-+|+.+||.|+.++++.... ... .+.    .+..+||.+ .-+|..|.....|.+..+
T Consensus         5 ~~~~sp~~~kv~~~L~~~gi~y~~~~~~~~~~-~~~-~~~----~p~~~VPvL~~~~g~~l~eS~aI~~yL~   70 (210)
T PRK10387          5 IYDHCPFCVKARMIFGLKNIPVELIVLANDDE-ATP-IRM----IGQKQVPILQKDDGSYMPESLDIVHYID   70 (210)
T ss_pred             eCCCCchHHHHHHHHHHcCCCeEEEEcCCCch-hhH-HHh----cCCcccceEEecCCeEecCHHHHHHHHH
Confidence            345688876 8999999999999998864322 112 122    234589999 568899999888887543

>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha

Probab=91.57  E-value=0.95  Score=34.76  Aligned_cols=61  Identities=18%  Similarity=0.238  Sum_probs=42.0

Q ss_pred             CCcHH-HHHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHHH
Q 045109          268 YEDCC-HVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRM  332 (423)
Q Consensus       268 ~c~Cc-~VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~L  332 (423)
                      .++++ .++-+|+..||.|+.+.++.......+    +.......++|.+..+|..|.....+.+.
T Consensus         8 ~~~~~~~v~~~l~~~gi~~e~~~~~~~~~~~~~----~~~~~p~~~vP~L~~~~~~l~es~aI~~y   69 (72)
T cd03039           8 IRGRGEPIRLLLADAGVEYEDVRITYEEWPELD----LKPTLPFGQLPVLEIDGKKLTQSNAILRY   69 (72)
T ss_pred             CcchHHHHHHHHHHCCCCcEEEEeCHHHhhhhh----hccCCcCCCCCEEEECCEEEEecHHHHHH
Confidence            44554 489999999999999988643211111    22234456999999999888877776553

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma

>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs

Probab=91.02  E-value=1.1  Score=34.37  Aligned_cols=62  Identities=16%  Similarity=0.111  Sum_probs=42.3

Q ss_pred             CCCCCcHHH-HHHHHHh--CCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe-CCEEEcchHHHHH
Q 045109          265 RKTYEDCCH-VRVILKG--LGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV-GKKYIGGAEEIRR  331 (423)
Q Consensus       265 RKT~c~Cc~-VK~LL~~--~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV-dGe~IGGaDEV~~  331 (423)
                      .-..|++|. ++-+|+.  +|+.|+.+.+++. ....++.+.-    ...++|.+.. +|..|.....+.+
T Consensus         5 ~~~~s~~~~~~~~~l~~~~~~i~~~~~~~~~~-~~~~~~~~~~----p~~~vP~l~~~~g~~l~es~aI~~   70 (73)
T cd03049           5 YSPTSPYVRKVRVAAHETGLGDDVELVLVNPW-SDDESLLAVN----PLGKIPALVLDDGEALFDSRVICE   70 (73)
T ss_pred             cCCCCcHHHHHHHHHHHhCCCCCcEEEEcCcc-cCChHHHHhC----CCCCCCEEEECCCCEEECHHHHHh
Confidence            345688766 8899988  8999999988642 2234554432    2458999875 7777777666654

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.

>TIGR02182 GRXB Glutaredoxin, GrxB family

Probab=90.29  E-value=1.4  Score=41.07  Aligned_cols=63  Identities=11%  Similarity=0.110  Sum_probs=45.3

Q ss_pred             CCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceE-eCCEEEcchHHHHHHHH
Q 045109          266 KTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVF-VGKKYIGGAEEIRRMHE  334 (423)
Q Consensus       266 KT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVF-VdGe~IGGaDEV~~LhE  334 (423)
                      ...||+|. |+-+|..+|+.|+.+++..... . ...+ +   ....+||.+. .+|..|.+...+.+..+
T Consensus         5 ~~~sp~~~kvr~~L~~~gl~~e~~~~~~~~~-~-~~~~-~---np~g~vP~l~~~~g~~l~es~~I~~yL~   69 (209)
T TIGR02182         5 YDHCPFCVRARMIFGLKNIPVEKHVLLNDDE-E-TPIR-M---IGAKQVPILQKDDGRAMPESLDIVAYFD   69 (209)
T ss_pred             CCCCChHHHHHHHHHHcCCCeEEEECCCCcc-h-hHHH-h---cCCCCcceEEeeCCeEeccHHHHHHHHH
Confidence            45688876 9999999999999988754321 1 2222 2   2245899997 78899999998888443

This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.

>cd02947 TRX_family TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains

Probab=90.20  E-value=2.4  Score=31.98  Aligned_cols=56  Identities=23%  Similarity=0.363  Sum_probs=36.9

Q ss_pred             CcEEEEEeCCCCCCCCCCcHHH-HHHHHHh-----CCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCE
Q 045109          252 EKLVVYFTSLRGIRKTYEDCCH-VRVILKG-----LGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKK  321 (423)
Q Consensus       252 ~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~-----~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe  321 (423)
                      ..++||+++      ++|+.|. +..+|+.     .++.+...|++...    ++...++    -..+|.+++  +|+
T Consensus        11 ~~~ll~~~~------~~C~~C~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~----v~~~P~~~~~~~g~   74 (93)
T cd02947          11 KPVVVDFWA------PWCGPCKAIAPVLEELAEEYPKVKFVKVDVDENP----ELAEEYG----VRSIPTFLFFKNGK   74 (93)
T ss_pred             CcEEEEEEC------CCChhHHHhhHHHHHHHHHCCCceEEEEECCCCh----hHHHhcC----cccccEEEEEECCE
Confidence            566777654      5898876 5666655     67888888886433    3333333    347899777  776

Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functio

>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs

Probab=89.77  E-value=2  Score=33.76  Aligned_cols=59  Identities=15%  Similarity=0.190  Sum_probs=41.5

Q ss_pred             cHHH-HHHHHHhCCCcEEEEECCCCh--hhHHHHHHHHcCCCCCCCCCceEeC---CEEEcchHHHHHH
Q 045109          270 DCCH-VRVILKGLGVRVDERDLSMHS--GFKNELKELLGDGFSGGGLPRVFVG---KKYIGGAEEIRRM  332 (423)
Q Consensus       270 ~Cc~-VK~LL~~~gV~yeErDVsmd~--~~reEL~~lLg~~tg~~TVPQVFVd---Ge~IGGaDEV~~L  332 (423)
                      ++|. ++-+|+.+|+.|+.+.+++..  ....++.+.    ....+||.+..+   |..|.....+.+.
T Consensus        10 ~~~~~v~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~----~p~~~vP~l~~~~~~g~~l~eS~aI~~y   74 (81)
T cd03048          10 PNGFKVSIMLEELGLPYEIHPVDISKGEQKKPEFLKI----NPNGRIPAIVDHNGTPLTVFESGAILLY   74 (81)
T ss_pred             CChHHHHHHHHHcCCCcEEEEecCcCCcccCHHHHHh----CcCCCCCEEEeCCCCceEEEcHHHHHHH
Confidence            5555 899999999999988776432  223455543    234589999887   7888877777664

Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and

>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis

Probab=88.81  E-value=2.3  Score=33.12  Aligned_cols=63  Identities=14%  Similarity=0.013  Sum_probs=43.7

Q ss_pred             CCCCcHHH-HHHHHHhCCCcEEEEECCCChhh-HHHHHHHHcCCCCCCCCCceEeC-CEEEcchHHHHHH
Q 045109          266 KTYEDCCH-VRVILKGLGVRVDERDLSMHSGF-KNELKELLGDGFSGGGLPRVFVG-KKYIGGAEEIRRM  332 (423)
Q Consensus       266 KT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~-reEL~~lLg~~tg~~TVPQVFVd-Ge~IGGaDEV~~L  332 (423)
                      -..|+++. ++-+|+..|+.|+.++++...+. ..++.++    ....++|.+..+ |..|-....+.+.
T Consensus         6 ~~~~~~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~----nP~~~vP~L~~~~g~~l~es~aI~~y   71 (75)
T cd03044           6 YPGNPRSLKILAAAKYNGLDVEIVDFQPGKENKTPEFLKK----FPLGKVPAFEGADGFCLFESNAIAYY   71 (75)
T ss_pred             CCCCccHHHHHHHHHHcCCceEEEecccccccCCHHHHHh----CCCCCCCEEEcCCCCEEeeHHHHHHH
Confidence            34577766 89999999999999998865322 2344443    234689999985 7777766666553

EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=88.70  E-value=0.3  Score=51.02  Aligned_cols=54  Identities=30%  Similarity=0.544  Sum_probs=39.9

Q ss_pred             CccccccCcc------ceEeCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCcc---cCCCCC
Q 045109          356 VGACEACGDV------RFVPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLT---RCPICC  422 (423)
Q Consensus       356 ~~~C~~CGG~------rfVpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLi---rCp~C~  422 (423)
                      ...|..|.|.      .-+.|+.|+|+-.+....+.       +.      -...+.|+.||-.|-+   +|+.|.
T Consensus       142 ~~~C~~C~GsGak~gt~~~tC~tC~G~G~v~~~~~~-------g~------~~~~~~C~~C~G~G~~i~~pC~~C~  204 (371)
T COG0484         142 SVTCSTCHGSGAKPGTDPKTCPTCNGSGQVRTVQRT-------GF------FSFQQTCPTCNGTGKIIKDPCGKCK  204 (371)
T ss_pred             eeECCcCCCCCCCCCCCCCcCCCCCCcCeEEEEEee-------eE------EEEEEECCCCccceeECCCCCCCCC
Confidence            4569999988      77899999999776654210       10      1135899999999987   599983

>cd01659 TRX_superfamily Thioredoxin (TRX) superfamily; a large, diverse group of proteins containing a TRX-fold

Probab=88.66  E-value=1.1  Score=30.34  Aligned_cols=51  Identities=24%  Similarity=0.484  Sum_probs=33.3

Q ss_pred             CCCCCcHHH-HHHHHH-----hCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCC
Q 045109          265 RKTYEDCCH-VRVILK-----GLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGK  320 (423)
Q Consensus       265 RKT~c~Cc~-VK~LL~-----~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdG  320 (423)
                      ...+|+.|. ++..|.     ..++.+..++++........+ ..    .+...+|.+++.+
T Consensus         5 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~P~~~~~~   61 (69)
T cd01659           5 YAPWCPFCQALRPVLAELALLNKGVKFEAVDVDEDPALEKEL-KR----YGVGGVPTLVVFG   61 (69)
T ss_pred             ECCCChhHHhhhhHHHHHHhhCCCcEEEEEEcCCChHHhhHH-Hh----CCCccccEEEEEe
Confidence            456788777 677777     567889999987554332221 11    2345899998876

Many members contain a classic TRX domain with a redox active CXXC motif. They function as protein disulfide oxidoreductases (PDOs), altering the redox state of target proteins via the reversible oxidation of their active site dithiol. The PDO members of this superfamily include TRX, protein disulfide isomerase (PDI), tlpA-like, glutaredoxin, NrdH redoxin, and the bacterial Dsb (DsbA, DsbC, DsbG, DsbE, DsbDgamma) protein families. Members of the superfamily that do not function as PDOs but contain a TRX-fold domain include phosducins, peroxiredoxins and glutathione (GSH) peroxidases, SCO proteins, GSH transferases (GST, N-terminal domain), arsenic reductases, TRX-like ferredoxins and calsequestrin, among others.

>PHA02278 thioredoxin-like protein

Probab=88.65  E-value=2.4  Score=36.09  Aligned_cols=64  Identities=11%  Similarity=0.194  Sum_probs=39.3

Q ss_pred             CCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHh------CCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCce--EeCC
Q 045109          250 GKEKLVVYFTSLRGIRKTYEDCCH-VRVILKG------LGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRV--FVGK  320 (423)
Q Consensus       250 ~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~------~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQV--FVdG  320 (423)
                      ..+.||||+.      .++|.-|+ +..+|+.      ..+.+..+|++.+.....++.+.++    -.++|.+  |-||
T Consensus        13 ~~~~vvV~F~------A~WCgpCk~m~p~l~~l~~~~~~~~~~~~vdvd~~~~d~~~l~~~~~----I~~iPT~i~fk~G   82 (103)
T PHA02278         13 QKKDVIVMIT------QDNCGKCEILKSVIPMFQESGDIKKPILTLNLDAEDVDREKAVKLFD----IMSTPVLIGYKDG   82 (103)
T ss_pred             CCCcEEEEEE------CCCCHHHHhHHHHHHHHHhhhcCCceEEEEECCccccccHHHHHHCC----CccccEEEEEECC
Confidence            5678888874      58998776 4444432      2356888888744322345666654    3466764  4588


Q ss_pred             EEE
Q 045109          321 KYI  323 (423)
Q Consensus       321 e~I  323 (423)
                      +.+
T Consensus        83 ~~v   85 (103)
T PHA02278         83 QLV   85 (103)
T ss_pred             EEE
Confidence            755

>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]

Probab=88.50  E-value=1.4  Score=45.12  Aligned_cols=83  Identities=17%  Similarity=0.239  Sum_probs=59.8

Q ss_pred             CcEEEEEeCCCCCCCCCCcH-HHHHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHH
Q 045109          252 EKLVVYFTSLRGIRKTYEDC-CHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIR  330 (423)
Q Consensus       252 ~kVVIYtTSLrGIRKT~c~C-c~VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~  330 (423)
                      =.+|||       .=..||+ |+||++|+-+|+.|..++|+  +-.|.|++=-     .-+.||.|.|+|+-.-...-|.
T Consensus        89 L~l~Ly-------QyetCPFCcKVrAFLDyhgisY~VVEVn--pV~r~eIk~S-----sykKVPil~~~Geqm~dSsvII  154 (370)
T KOG3029|consen   89 LDLVLY-------QYETCPFCCKVRAFLDYHGISYAVVEVN--PVLRQEIKWS-----SYKKVPILLIRGEQMVDSSVII  154 (370)
T ss_pred             ceEEEE-------eeccCchHHHHHHHHhhcCCceEEEEec--chhhhhcccc-----ccccccEEEeccceechhHHHH
Confidence            378999       3345884 56999999999999999985  5556666422     2357999999998766655555


Q ss_pred             HHH------HcCchHHHHcccccc
Q 045109          331 RMH------EEGQLEKVVEGCEMI  348 (423)
Q Consensus       331 ~Lh------EsGeL~kLL~~~~~~  348 (423)
                      .+.      ..-.|.++++..++.
T Consensus       155 s~laTyLq~~~q~l~eiiq~yPa~  178 (370)
T KOG3029|consen  155 SLLATYLQDKRQDLGEIIQMYPAT  178 (370)
T ss_pred             HHHHHHhccCCCCHHHHHHhcccc
Confidence            543      345778888877754

>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B

Probab=88.32  E-value=0.94  Score=35.29  Aligned_cols=63  Identities=19%  Similarity=0.250  Sum_probs=44.7

Q ss_pred             CCcHHH-HHHHHHhCCCcEEEEECCC--Chh-hHHHHHHHHcCCCCCCCCCceEe-CCEEEcchHHHHHHHH
Q 045109          268 YEDCCH-VRVILKGLGVRVDERDLSM--HSG-FKNELKELLGDGFSGGGLPRVFV-GKKYIGGAEEIRRMHE  334 (423)
Q Consensus       268 ~c~Cc~-VK~LL~~~gV~yeErDVsm--d~~-~reEL~~lLg~~tg~~TVPQVFV-dGe~IGGaDEV~~LhE  334 (423)
                      +|||+. ++-+|+.+|+.|+..-+.+  ... ...++.++-.    ..+||.+.. +|+.|.....+.+..+
T Consensus         1 ~sP~a~Rv~i~l~~~gl~~~~~~v~~~~~~~~~~~~~~~~~p----~~~VP~L~~~~g~vi~eS~~I~~yL~   68 (70)
T PF13409_consen    1 FSPFAHRVRIALEEKGLPYEIKVVPLIPKGEQKPPEFLALNP----RGKVPVLVDPDGTVINESLAILEYLE   68 (70)
T ss_dssp             T-HHHHHHHHHHHHHTGTCEEEEEETTTTBCTTCHBHHHHST----T-SSSEEEETTTEEEESHHHHHHHHH
T ss_pred             CchHhHHHHHHHHHhCCCCEEEEEeeecCccccChhhhccCc----CeEEEEEEECCCCEeeCHHHHHHHHh
Confidence            689987 8999999999988776632  111 1245655432    458999998 8999999988877544

...

>PRK14287 chaperone protein DnaJ; Provisional

Probab=87.71  E-value=0.45  Score=49.11  Aligned_cols=55  Identities=22%  Similarity=0.554  Sum_probs=36.1

Q ss_pred             CccccccCccc------eEeCCCCCCcceeccccchhhhcccCCCCccccCcc-ceeeCCCCCCCCcc---cCCCCC
Q 045109          356 VGACEACGDVR------FVPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADF-GFQRCPDCNENGLT---RCPICC  422 (423)
Q Consensus       356 ~~~C~~CGG~r------fVpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~-~~~RC~~CNENGLi---rCp~C~  422 (423)
                      ...|..|.|.+      -..|..|+|+-.+...-..       +     -+-+ ....|+.|+-.|.+   +|+.|.
T Consensus       138 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~-------~-----~G~~~~~~~C~~C~G~G~~~~~~C~~C~  202 (371)
T PRK14287        138 EETCGTCHGSGAKPGTKPETCSHCGGSGQLNVEQNT-------P-----FGRVVNRRVCHHCEGTGKIIKQKCATCG  202 (371)
T ss_pred             eccCCCCCCcccCCCCCCcccCCCCCEEEEEEEEec-------C-----CceEEEEEeCCCCCCCCccccccCCCCC
Confidence            34688888765      4679999999776544110       0     0000 14689999999966   588884

>PRK10767 chaperone protein DnaJ; Provisional

Probab=87.68  E-value=0.47  Score=48.76  Aligned_cols=52  Identities=25%  Similarity=0.615  Sum_probs=35.2

Q ss_pred             CccccccCccce------EeCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCcc---cCCCCC
Q 045109          356 VGACEACGDVRF------VPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLT---RCPICC  422 (423)
Q Consensus       356 ~~~C~~CGG~rf------VpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLi---rCp~C~  422 (423)
                      ...|..|.|.+.      ..|..|+|+-++.....+             . . ....|+.|+-.|.+   +|+.|.
T Consensus       142 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~-------------~-~-~~~~C~~C~G~G~~~~~~C~~C~  202 (371)
T PRK10767        142 LVTCDTCHGSGAKPGTSPKTCPTCHGAGQVRMQQGF-------------F-T-VQQTCPTCHGRGKIIKDPCKKCH  202 (371)
T ss_pred             cccCCCCCCcccCCCCCCccCCCCCCeeEEEEeece-------------E-E-EEEeCCCCCCceeECCCCCCCCC
Confidence            356888888663      579999998776654100             0 1 24589999888866   688874

>PRK14300 chaperone protein DnaJ; Provisional

Probab=87.55  E-value=0.43  Score=49.25  Aligned_cols=52  Identities=25%  Similarity=0.547  Sum_probs=36.0

Q ss_pred             CccccccCccc------eEeCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCcc---cCCCCC
Q 045109          356 VGACEACGDVR------FVPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLT---RCPICC  422 (423)
Q Consensus       356 ~~~C~~CGG~r------fVpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLi---rCp~C~  422 (423)
                      ...|..|.|.+      ...|..|+|+-+++....+              -. ....|+.|+-.|.+   +|+.|-
T Consensus       145 ~~~C~~C~G~g~~~~~~~~~C~~C~G~G~~~~~~g~--------------~~-~~~~C~~C~G~G~~~~~~C~~C~  205 (372)
T PRK14300        145 EVKCDTCHGSGSEKGETVTTCDACSGVGATRMQQGF--------------FT-IEQACHKCQGNGQIIKNPCKKCH  205 (372)
T ss_pred             ccccCCCCCcccCCCCCCccCCCccCeEEEEEeece--------------EE-EEEeCCCCCccceEeCCCCCCCC
Confidence            34588888765      5789999999777654100              01 24589999999965   688883

>PRK09481 sspA stringent starvation protein A; Provisional

Probab=87.39  E-value=3.3  Score=38.35  Aligned_cols=67  Identities=16%  Similarity=0.252  Sum_probs=49.4

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRR  331 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~  331 (423)
                      .+.||       .-..|+|+. |+-+|+..||.|+.+.|++. ....++.++-    ...+||.+..+|..|--...|.+
T Consensus        10 ~~~Ly-------~~~~s~~~~rv~~~L~e~gl~~e~~~v~~~-~~~~~~~~~n----P~g~VPvL~~~g~~l~ES~AIl~   77 (211)
T PRK09481         10 VMTLF-------SGPTDIYSHQVRIVLAEKGVSVEIEQVEKD-NLPQDLIDLN----PYQSVPTLVDRELTLYESRIIME   77 (211)
T ss_pred             eeEEe-------CCCCChhHHHHHHHHHHCCCCCEEEeCCcc-cCCHHHHHhC----CCCCCCEEEECCEEeeCHHHHHH
Confidence            47789       455688877 89999999999999998753 2234555532    23589999999988877777665

>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation

Probab=87.20  E-value=0.86  Score=35.94  Aligned_cols=46  Identities=24%  Similarity=0.515  Sum_probs=24.5

Q ss_pred             cceEeCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCccc----CCCC
Q 045109          365 VRFVPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLTR----CPIC  421 (423)
Q Consensus       365 ~rfVpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLir----Cp~C  421 (423)
                      .....|+.|+|+-.++.....       .    +........|+.|+=.|.+.    |+.|
T Consensus        13 ~~~~~C~~C~G~G~~~~~~~~-------~----~~~~~~~~~C~~C~G~G~~i~~~~C~~C   62 (66)
T PF00684_consen   13 KKPKTCPQCNGSGQVTRRQQT-------P----GGVFQMQQTCPKCGGTGKIIEKDPCKTC   62 (66)
T ss_dssp             TT-EE-TTSSSSSEEEEEEES-------S----STTEEEEEE-TTTSSSSEE-TSSB-SSS
T ss_pred             CCCcCCcCCCCeeEEEEEEeC-------C----CeEEEEEEECCCCcceeeEECCCCCCCC
Confidence            445788888888766654210       0    00112357788888888774    7776

DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.

>PRK14290 chaperone protein DnaJ; Provisional

Probab=86.55  E-value=0.57  Score=48.15  Aligned_cols=51  Identities=25%  Similarity=0.726  Sum_probs=33.0

Q ss_pred             ccccccCccce-----EeCCCCCCcceeccccchhhhcccCCCCccccCcc---ceeeCCCCCCCCc---ccCCCC
Q 045109          357 GACEACGDVRF-----VPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADF---GFQRCPDCNENGL---TRCPIC  421 (423)
Q Consensus       357 ~~C~~CGG~rf-----VpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~---~~~RC~~CNENGL---irCp~C  421 (423)
                      ..|..|.|.+.     ..|..|+|+-.+...-.              .+-+   ....|+.|+-.|-   .+|+.|
T Consensus       150 ~~C~~C~G~g~~~~~~~~C~~C~G~G~~~~~~~--------------~g~~~~~~~~~C~~C~G~G~~~~~~C~~C  211 (365)
T PRK14290        150 AMCPDCSGTGAKNGKLITCPTCHGTGQQRIVRG--------------QGFFRMVTVTTCRTCGGRGRIPEEKCPRC  211 (365)
T ss_pred             ccCCCCccccCCCCCCccCCCCCCcCEEEEEec--------------cCeEEEEEEEeCCCCCCceeEccCCCCCC
Confidence            45888877664     57999999876554310              0111   1257999988884   468877

>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs

Probab=86.49  E-value=2.6  Score=33.00  Aligned_cols=61  Identities=16%  Similarity=0.235  Sum_probs=44.3

Q ss_pred             CCCcHHH-HHHHHHhCCCcEEEEECCCChh-hHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHH
Q 045109          267 TYEDCCH-VRVILKGLGVRVDERDLSMHSG-FKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRR  331 (423)
Q Consensus       267 T~c~Cc~-VK~LL~~~gV~yeErDVsmd~~-~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~  331 (423)
                      .+++|+. ++-+|+..||.|+.+.++.... ...++.+.    .....+|.+..+|.-|.....+.+
T Consensus         8 ~~s~~s~~v~~~L~~~gl~~e~~~v~~~~~~~~~~~~~~----nP~g~vP~L~~~g~~l~eS~aI~~   70 (73)
T cd03043           8 NYSSWSLRPWLLLKAAGIPFEEILVPLYTPDTRARILEF----SPTGKVPVLVDGGIVVWDSLAICE   70 (73)
T ss_pred             CCCHHHHHHHHHHHHcCCCCEEEEeCCCCccccHHHHhh----CCCCcCCEEEECCEEEEcHHHHHH
Confidence            4577776 8999999999999988875432 22344432    234689999999988887777655

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.

>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase

Probab=86.24  E-value=4.7  Score=31.20  Aligned_cols=63  Identities=19%  Similarity=0.268  Sum_probs=42.1

Q ss_pred             CCCCcHH-HHHHHHHhCCCcEEEEECCCChh--hHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHHH
Q 045109          266 KTYEDCC-HVRVILKGLGVRVDERDLSMHSG--FKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRM  332 (423)
Q Consensus       266 KT~c~Cc-~VK~LL~~~gV~yeErDVsmd~~--~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~L  332 (423)
                      -..++++ +++-+|+..|+.|+.+.++....  ...++.+.    ....+||.+..+|..|-....+.+.
T Consensus         6 ~~~s~~~~~v~~~l~~~g~~~~~~~v~~~~~~~~~~~~~~~----~p~~~vP~L~~~~~~l~eS~aI~~Y   71 (76)
T cd03050           6 DLMSQPSRAVYIFLKLNKIPFEECPIDLRKGEQLTPEFKKI----NPFGKVPAIVDGDFTLAESVAILRY   71 (76)
T ss_pred             CCCChhHHHHHHHHHHcCCCcEEEEecCCCCCcCCHHHHHh----CcCCCCCEEEECCEEEEcHHHHHHH
Confidence            3445555 48999999999999888764321  12344443    2245899998888777766666553

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC

>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress

Probab=86.16  E-value=2.4  Score=32.89  Aligned_cols=60  Identities=10%  Similarity=0.184  Sum_probs=41.2

Q ss_pred             CcHHHHHHHHHhCCCcEEEEECCCChh--hHHHHHHHHcCCCCCCCCCceEeC-CEEEcchHHHHHH
Q 045109          269 EDCCHVRVILKGLGVRVDERDLSMHSG--FKNELKELLGDGFSGGGLPRVFVG-KKYIGGAEEIRRM  332 (423)
Q Consensus       269 c~Cc~VK~LL~~~gV~yeErDVsmd~~--~reEL~~lLg~~tg~~TVPQVFVd-Ge~IGGaDEV~~L  332 (423)
                      +.+.+|+-+|..+|+.|+.+.++....  ...++.+.-    ....+|.+-.+ |..|.....+.+.
T Consensus         9 ~~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~n----p~~~vP~l~~~~g~~l~eS~aI~~y   71 (77)
T cd03057           9 ACSLAPHIALEELGLPFELVRVDLRTKTQKGADYLAIN----PKGQVPALVLDDGEVLTESAAILQY   71 (77)
T ss_pred             CchHHHHHHHHHcCCCceEEEEecccCccCCHhHHHhC----CCCCCCEEEECCCcEEEcHHHHHHH
Confidence            334568999999999999888765331  234555432    34689988887 7777777666553

The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.

>COG0178 UvrA Excinuclease ATPase subunit [DNA replication, recombination, and repair]

Probab=86.12  E-value=0.87  Score=52.08  Aligned_cols=57  Identities=30%  Similarity=0.453  Sum_probs=36.1

Q ss_pred             EEEcchHHHHHHHHcCchHHHHcccccccCCCCCCCccccccCccce------------EeCCCCCCcce
Q 045109          321 KYIGGAEEIRRMHEEGQLEKVVEGCEMIDDGGRGNVGACEACGDVRF------------VPCETCSGSCK  378 (423)
Q Consensus       321 e~IGGaDEV~~LhEsGeL~kLL~~~~~~~~~~~g~~~~C~~CGG~rf------------VpC~~C~GS~K  378 (423)
                      .|+|-+|++++|...-...+.- ++..-.=.-.-.++.|++|.|-++            |||+.|+|.+.
T Consensus       696 TYtg~Fd~IR~lFA~tpeAK~r-Gyk~grFSFNvkGGRCe~C~GdG~ikIeM~FLpdVyv~CevC~GkRY  764 (935)
T COG0178         696 TYTGVFDDIRELFAGTPEAKAR-GYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCEVCHGKRY  764 (935)
T ss_pred             chhcchHHHHHHHhcChHHHHc-CCCcccccccCCCcCCccccCCceEEEEeccCCCceeeCCCcCCccc
Confidence            5778899998887644433322 222100001123678999999775            79999999754

>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]

Probab=86.03  E-value=0.5  Score=48.85  Aligned_cols=20  Identities=40%  Similarity=0.750  Sum_probs=12.4

Q ss_pred             cccccCccceEeCCCCCCcc
Q 045109          358 ACEACGDVRFVPCETCSGSC  377 (423)
Q Consensus       358 ~C~~CGG~rfVpC~~C~GS~  377 (423)
                      .|.+|-|.+-+.|..|||+-
T Consensus       189 ~ch~c~gRG~~vc~gc~g~G  208 (406)
T KOG2813|consen  189 FCHACLGRGAMVCHGCSGSG  208 (406)
T ss_pred             hhhcccCCCceeccCcCCCC
Confidence            36666666666666666654

>PRK14284 chaperone protein DnaJ; Provisional

Probab=85.86  E-value=0.71  Score=47.95  Aligned_cols=52  Identities=27%  Similarity=0.719  Sum_probs=33.3

Q ss_pred             CccccccCccce------EeCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCcc---cCCCCC
Q 045109          356 VGACEACGDVRF------VPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLT---RCPICC  422 (423)
Q Consensus       356 ~~~C~~CGG~rf------VpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLi---rCp~C~  422 (423)
                      ...|..|.|.+.      ..|..|+|+-.++..-         |-     .. ....|+.|+-.|.+   +|+.|.
T Consensus       158 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~---------G~-----~~-~~~~C~~C~G~G~~~~~~C~~C~  218 (391)
T PRK14284        158 YKSCDACSGSGANSSQGIKVCDRCKGSGQVVQSR---------GF-----FS-MASTCPECGGEGRVITDPCSVCR  218 (391)
T ss_pred             eccCCCCcccccCCCCCCeecCccCCeeEEEEEe---------ce-----EE-EEEECCCCCCCCcccCCcCCCCC
Confidence            345888877654      5689999987665431         00     01 24688888888865   577773

>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit

Probab=85.51  E-value=1.1  Score=47.64  Aligned_cols=64  Identities=19%  Similarity=0.237  Sum_probs=40.1

Q ss_pred             hhcCCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhC-----CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCC
Q 045109          247 HKCGKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGL-----GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGK  320 (423)
Q Consensus       247 ~li~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~-----gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdG  320 (423)
                      .+-+.-.|.+|.|       ..||+|. |+++++.+     +|..+.+|....+    ++.+..    +-.+||++||||
T Consensus       114 ~~~~~~~i~~f~~-------~~Cp~Cp~~v~~~~~~a~~~p~i~~~~id~~~~~----~~~~~~----~v~~VP~~~i~~  178 (515)
T TIGR03140       114 RLNGPLHFETYVS-------LTCQNCPDVVQALNQMALLNPNISHTMIDGALFQ----DEVEAL----GIQGVPAVFLNG  178 (515)
T ss_pred             hcCCCeEEEEEEe-------CCCCCCHHHHHHHHHHHHhCCCceEEEEEchhCH----HHHHhc----CCcccCEEEECC
Confidence            3445567889944       5698887 66666544     5667777764332    333332    334899999999


Q ss_pred             EEEcc
Q 045109          321 KYIGG  325 (423)
Q Consensus       321 e~IGG  325 (423)
                      +.++.
T Consensus       179 ~~~~~  183 (515)
T TIGR03140       179 EEFHN  183 (515)
T ss_pred             cEEEe
Confidence            76643

This enzyme is the partner of the peroxiredoxin (alkyl hydroperoxide reductase) AhpC which contains the peroxide-reactive cysteine. AhpF contains the reductant (NAD(P)H) binding domain (pfam00070) and presumably acts to resolve the disulfide which forms after oxidation of the active site cysteine in AphC. This proteins contains two paired conserved cysteine motifs, CxxCP and CxHCDGP.

>PRK14285 chaperone protein DnaJ; Provisional

Probab=85.04  E-value=0.7  Score=47.64  Aligned_cols=52  Identities=29%  Similarity=0.547  Sum_probs=32.5

Q ss_pred             CccccccCccc------eEeCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCcc---cCCCCC
Q 045109          356 VGACEACGDVR------FVPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLT---RCPICC  422 (423)
Q Consensus       356 ~~~C~~CGG~r------fVpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLi---rCp~C~  422 (423)
                      ...|..|.|.+      -..|..|+|+-.++...         |-    .  -....|+.|+-.|-+   +|+.|.
T Consensus       146 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~---------G~----~--~~~~~C~~C~G~G~~~~~~C~~C~  206 (365)
T PRK14285        146 NMLCESCLGKKSEKGTSPSICNMCNGSGRVMQGG---------GF----F--RVTTTCPKCYGNGKIISNPCKSCK  206 (365)
T ss_pred             cccCCCCCCcccCCCCCCccCCCccCceeEEecC---------ce----e--EEeeecCCCCCcccccCCCCCCCC
Confidence            34588887766      35688888887665431         10    0  124678888888854   577773

>PRK14296 chaperone protein DnaJ; Provisional

Probab=84.80  E-value=0.68  Score=47.89  Aligned_cols=56  Identities=23%  Similarity=0.489  Sum_probs=33.4

Q ss_pred             CccccccCccce------EeCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCcc---cCCCCC
Q 045109          356 VGACEACGDVRF------VPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLT---RCPICC  422 (423)
Q Consensus       356 ~~~C~~CGG~rf------VpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLi---rCp~C~  422 (423)
                      ...|..|.|.+.      ..|..|+|+-.++..-..       |    ....-....|+.|+=-|-+   +|+.|.
T Consensus       149 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~-------g----~~~~q~~~~C~~C~G~G~~~~~~C~~C~  213 (372)
T PRK14296        149 LTNCSKCFGSGAESNSDIHICNNCHGTGEVLVQKNM-------G----FFQFQQSAKCNVCNGAGKIIKNKCKNCK  213 (372)
T ss_pred             eeccCCCCCCccCCCCCCccCCCCCCCceEEEEEec-------c----ceEEEEEecCCCcCCcceeecccccCCC
Confidence            345888887664      569999999766543100       0    0000013578888877765   477773

>PRK14289 chaperone protein DnaJ; Provisional

Probab=84.51  E-value=0.81  Score=47.35  Aligned_cols=56  Identities=27%  Similarity=0.569  Sum_probs=35.3

Q ss_pred             CccccccCccce------EeCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCcc---cCCCCC
Q 045109          356 VGACEACGDVRF------VPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLT---RCPICC  422 (423)
Q Consensus       356 ~~~C~~CGG~rf------VpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLi---rCp~C~  422 (423)
                      ...|..|.|.+.      ..|..|+|+-+++..-..-     .|      .--....|+.|+-.|-+   +|+.|-
T Consensus       154 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~-----~G------~~~~~~~C~~C~G~G~~~~~~C~~C~  218 (386)
T PRK14289        154 YVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQNTI-----LG------TMQTQSTCPTCNGEGKIIKKKCKKCG  218 (386)
T ss_pred             ecccCCCCCCCCCCCCCCCcCCCCcCeEEEEEEEecc-----cc------eEEEEEecCCCCccccccCcCCCCCC
Confidence            356888877654      6799999997766541100     00      00024689999888865   688873

>cd02949 TRX_NTR TRX domain, novel NADPH thioredoxin reductase (NTR) family; composed of fusion proteins found only in oxygenic photosynthetic organisms containing both TRX and NTR domains

Probab=84.05  E-value=4  Score=33.21  Aligned_cols=59  Identities=24%  Similarity=0.368  Sum_probs=35.7

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HHHHHHh----C--CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCE
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VRVILKG----L--GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKK  321 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~----~--gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe  321 (423)
                      ...|+||+      ..++|+.|. +..+|+.    +  ++.+..+|++.+.    ++...++    ...+|.++|  +|+
T Consensus        13 ~~~vlv~f------~a~~C~~C~~~~~~l~~l~~~~~~~v~~~~id~d~~~----~l~~~~~----v~~vPt~~i~~~g~   78 (97)
T cd02949          13 DRLILVLY------TSPTCGPCRTLKPILNKVIDEFDGAVHFVEIDIDEDQ----EIAEAAG----IMGTPTVQFFKDKE   78 (97)
T ss_pred             CCeEEEEE------ECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCCCH----HHHHHCC----CeeccEEEEEECCe
Confidence            33455565      348999887 4555543    3  3677788876543    4555544    357887665  665


Q ss_pred             EE
Q 045109          322 YI  323 (423)
Q Consensus       322 ~I  323 (423)
                      .+
T Consensus        79 ~v   80 (97)
T cd02949          79 LV   80 (97)
T ss_pred             EE
Confidence            54

The TRX domain functions as a protein disulfide reductase via the reversible oxidation of an active center dithiol present in a CXXC motif, while the NTR domain functions as a reductant to oxidized TRX. The fusion protein is bifunctional, showing both TRX and NTR activities, but it is not an independent NTR/TRX system. In plants, the protein is found exclusively in shoots and mature leaves and is localized in the chloroplast. It is involved in plant protection against oxidative stress.

>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S

Probab=83.97  E-value=5.7  Score=30.28  Aligned_cols=59  Identities=14%  Similarity=0.087  Sum_probs=42.7

Q ss_pred             HHHHHHHHHhCCCcEEEEECCCCh--hhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHHHH
Q 045109          271 CCHVRVILKGLGVRVDERDLSMHS--GFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRMH  333 (423)
Q Consensus       271 Cc~VK~LL~~~gV~yeErDVsmd~--~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~Lh  333 (423)
                      +.+++-+|+..|+.|+.+.++...  ....++.+.    ....++|.+..+|..|.....+.+..
T Consensus        11 ~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~----~p~~~vP~l~~~g~~l~es~aI~~yL   71 (76)
T cd03046          11 SFRILWLLEELGLPYELVLYDRGPGEQAPPEYLAI----NPLGKVPVLVDGDLVLTESAAIILYL   71 (76)
T ss_pred             hHHHHHHHHHcCCCcEEEEeCCCCCccCCHHHHhc----CCCCCCCEEEECCEEEEcHHHHHHHH
Confidence            446899999999999998886532  123444442    23468999999999898888877643

cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb

>PRK14285 chaperone protein DnaJ; Provisional

Probab=83.94  E-value=0.96  Score=46.62  Aligned_cols=38  Identities=29%  Similarity=0.718  Sum_probs=30.2

Q ss_pred             ccccccCccceE-----------eCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCccc
Q 045109          357 GACEACGDVRFV-----------PCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLTR  417 (423)
Q Consensus       357 ~~C~~CGG~rfV-----------pC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLir  417 (423)
                      ..|..|.|.+.+           +|+.|+|.-++..                       .+|..|+-.|.++
T Consensus       164 ~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~-----------------------~~C~~C~G~g~v~  212 (365)
T PRK14285        164 SICNMCNGSGRVMQGGGFFRVTTTCPKCYGNGKIIS-----------------------NPCKSCKGKGSLK  212 (365)
T ss_pred             ccCCCccCceeEEecCceeEEeeecCCCCCcccccC-----------------------CCCCCCCCCCEEe
Confidence            469999998754           8999999987643                       2599999988763

>TIGR02187 GlrX_arch Glutaredoxin-like domain protein

Probab=83.87  E-value=5.6  Score=37.44  Aligned_cols=69  Identities=17%  Similarity=0.204  Sum_probs=39.0

Q ss_pred             HhhhcCCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHh----C-CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe
Q 045109          245 LDHKCGKEKLVVYFTSLRGIRKTYEDCCH-VRVILKG----L-GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV  318 (423)
Q Consensus       245 v~~li~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~----~-gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV  318 (423)
                      .+.+-+.-.|++|+++    ..+||+.|. +..+|+.    + ++.+..++++.+  ...++.+.++    -.++|.+.+
T Consensus        14 ~~~~~~~~~i~~f~~~----~a~wC~~C~~~~p~l~~la~~~~~~~i~~v~vd~~--~~~~l~~~~~----V~~~Pt~~~   83 (215)
T TIGR02187        14 LKELKNPVEIVVFTDN----DKEGCQYCKETEQLLEELSEVSPKLKLEIYDFDTP--EDKEEAEKYG----VERVPTTII   83 (215)
T ss_pred             HHhcCCCeEEEEEcCC----CCCCCCchHHHHHHHHHHHhhCCCceEEEEecCCc--ccHHHHHHcC----CCccCEEEE
Confidence            3334445567777542    358998776 5555543    3 355666777643  2345555554    346787766


Q ss_pred             --CCEEE
Q 045109          319 --GKKYI  323 (423)
Q Consensus       319 --dGe~I  323 (423)
                        +|+.+
T Consensus        84 f~~g~~~   90 (215)
T TIGR02187        84 LEEGKDG   90 (215)
T ss_pred             EeCCeee
Confidence              65443

This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.

>PRK14292 chaperone protein DnaJ; Provisional

Probab=83.78  E-value=0.9  Score=46.70  Aligned_cols=55  Identities=29%  Similarity=0.679  Sum_probs=35.0

Q ss_pred             CccccccCccc-------eEeCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCcc---cCCCC
Q 045109          356 VGACEACGDVR-------FVPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLT---RCPIC  421 (423)
Q Consensus       356 ~~~C~~CGG~r-------fVpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLi---rCp~C  421 (423)
                      ...|..|.|.+       ...|..|+|+-.+...-..-     -|    .. . ....|+.|+-.|.+   +|+.|
T Consensus       139 ~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~~~~-----~g----~~-~-~~~~C~~C~G~G~~~~~~C~~C  203 (371)
T PRK14292        139 LTECEHCHGSRTEPGGKPPKTCPTCRGAGAVRAQARTI-----FG----VV-E-TQQPCPTCRGEGQIITDPCTVC  203 (371)
T ss_pred             eecCCCCcccccCCCCCCCccCCCCCCccEEEEEEecc-----Cc----eE-E-EeeecCCCcccceecCCCCCCC
Confidence            35699998865       46799999997665431000     00    00 0 13589999998866   68887

>PRK14280 chaperone protein DnaJ; Provisional

Probab=83.75  E-value=0.86  Score=47.12  Aligned_cols=56  Identities=30%  Similarity=0.730  Sum_probs=34.4

Q ss_pred             CccccccCccc------eEeCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCcc---cCCCCC
Q 045109          356 VGACEACGDVR------FVPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLT---RCPICC  422 (423)
Q Consensus       356 ~~~C~~CGG~r------fVpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLi---rCp~C~  422 (423)
                      ...|..|.|.+      ...|..|+|+-.++.....-     .|      .--....|+.|+-.|.+   +|+.|.
T Consensus       143 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~-----~g------~~~~~~~C~~C~G~G~~~~~~C~~C~  207 (376)
T PRK14280        143 EETCDTCHGSGAKPGTSKETCSHCGGSGQVSVEQNTP-----FG------RVVNRQTCPHCNGTGQEIKEKCPTCH  207 (376)
T ss_pred             eccCCCCCCcccCCCCCCccCCCCCCEEEEEEEeecC-----Cc------eEEEEEEcCCCCCCCceecCCCCCCC
Confidence            34688888866      46799999987665441100     00      00024578888888864   577774

>PRK14282 chaperone protein DnaJ; Provisional

Probab=83.67  E-value=0.93  Score=46.69  Aligned_cols=55  Identities=27%  Similarity=0.651  Sum_probs=33.8

Q ss_pred             ccccccCccc------eEeCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCcc---cCCCCC
Q 045109          357 GACEACGDVR------FVPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLT---RCPICC  422 (423)
Q Consensus       357 ~~C~~CGG~r------fVpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLi---rCp~C~  422 (423)
                      ..|..|.|.+      ...|..|+|+-.++..-..-     -|      .--....|+.|+-.|.+   +|+.|.
T Consensus       153 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~-----~G------~~~~~~~C~~C~G~G~~~~~~C~~C~  216 (369)
T PRK14282        153 ETCPHCGGTGVEPGSGYVTCPKCHGTGRIREERRSF-----FG------VFVSERTCERCGGTGKIPGEYCHECG  216 (369)
T ss_pred             ccCCCCCccCCCCCCCCcCCCCCCCcCEEEEEEEcc-----Cc------ceEEEEECCCCCCcceeCCCCCCCCC
Confidence            4588887765      46799999997765431100     00      00024688888888865   577763

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=83.65  E-value=0.91  Score=46.26  Aligned_cols=55  Identities=27%  Similarity=0.638  Sum_probs=33.6

Q ss_pred             CccccccCccc------eEeCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCcc---cCCCC
Q 045109          356 VGACEACGDVR------FVPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLT---RCPIC  421 (423)
Q Consensus       356 ~~~C~~CGG~r------fVpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLi---rCp~C  421 (423)
                      ...|..|.|.+      ...|..|+|+-.++.....     .-|.     .. ....|+.|+-.|.+   +|+.|
T Consensus       143 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~-----~~g~-----~~-~~~~C~~C~G~G~~~~~~C~~C  206 (354)
T TIGR02349       143 KESCETCHGTGAKPGTDPKTCPTCGGTGQVRRQQGT-----PFGF-----FQ-QQQTCPTCGGEGKIIKEPCSTC  206 (354)
T ss_pred             CCcCCCCCCCCCCCCCCCccCCCCCCeeEEEEEEec-----cCCc-----eE-EEEecCCCCCcceecCCCCCCC
Confidence            34588888766      5679999998766543110     0000     00 13588888888865   57777

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>TIGR00862 O-ClC intracellular chloride channel protein

Probab=83.63  E-value=4.2  Score=39.77  Aligned_cols=66  Identities=15%  Similarity=0.129  Sum_probs=49.8

Q ss_pred             CCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHHHHH
Q 045109          264 IRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRMHE  334 (423)
Q Consensus       264 IRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~LhE  334 (423)
                      .+...|++|. |+-+|..+||.|+.+.|++... .+++.++-    ...+||.+..+|..|.....|.+..+
T Consensus        14 ~~~~~cp~~~rv~i~L~ekgi~~e~~~vd~~~~-~~~fl~in----P~g~vPvL~~~g~~l~ES~aI~eYL~   80 (236)
T TIGR00862        14 ESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRK-PEDLQNLA----PGTHPPFLTYNTEVKTDVNKIEEFLE   80 (236)
T ss_pred             CcCCCCHhHHHHHHHHHHcCCCcEEEEECCCCC-CHHHHHHC----cCCCCCEEEECCEEeecHHHHHHHHH
Confidence            3456799887 8999999999999999876532 24554432    23589999889999999888888544

These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.

>PRK14279 chaperone protein DnaJ; Provisional

Probab=83.56  E-value=0.86  Score=47.46  Aligned_cols=50  Identities=30%  Similarity=0.613  Sum_probs=28.7

Q ss_pred             ccccccCccce------EeCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCcc---cCCCC
Q 045109          357 GACEACGDVRF------VPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLT---RCPIC  421 (423)
Q Consensus       357 ~~C~~CGG~rf------VpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLi---rCp~C  421 (423)
                      ..|..|.|.+.      ..|..|+|+-.++...         +.     . .....|+.|+-.|.+   +|+.|
T Consensus       174 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~---------g~-----~-~~~~~C~~C~G~G~~i~~~C~~C  232 (392)
T PRK14279        174 APCTTCHGSGARPGTSPKVCPTCNGSGVISRNQ---------GA-----F-GFSEPCTDCRGTGSIIEDPCEEC  232 (392)
T ss_pred             ccCCCCccccccCCCCCCCCCCCcceEEEEEEe---------cc-----e-EEEEecCCCCceeEEeCCcCCCC
Confidence            45777777654      5678888876554431         00     0 023567777776643   45555

>PRK14286 chaperone protein DnaJ; Provisional

Probab=83.56  E-value=0.87  Score=47.05  Aligned_cols=51  Identities=27%  Similarity=0.674  Sum_probs=31.5

Q ss_pred             CccccccCccce------EeCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCcc---cCCCC
Q 045109          356 VGACEACGDVRF------VPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLT---RCPIC  421 (423)
Q Consensus       356 ~~~C~~CGG~rf------VpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLi---rCp~C  421 (423)
                      ...|..|.|.+.      ..|..|+|+-.+....         |.     .. ....|+.|+--|.+   +|+.|
T Consensus       150 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~---------G~-----~~-~~~~C~~C~G~G~~~~~~C~~C  209 (372)
T PRK14286        150 LESCVDCNGSGASKGSSPTTCPDCGGSGQIRRTQ---------GF-----FS-VATTCPTCRGKGTVISNPCKTC  209 (372)
T ss_pred             cccCCCCcCCCcCCCCCCccCCCCcCeEEEEEEe---------ce-----EE-EEEeCCCCCceeeEecccCCCC
Confidence            345888877664      6788888886654431         00     01 24578888777743   56666

>PF03960 ArsC: ArsC family; InterPro: IPR006660 Several bacterial taxon have a chromosomal resistance system, encoded by the ars operon, for the detoxification of arsenate, arsenite, and antimonite []

Probab=83.49  E-value=2.3  Score=36.07  Aligned_cols=39  Identities=23%  Similarity=0.274  Sum_probs=27.3

Q ss_pred             CCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHc
Q 045109          267 TYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLG  305 (423)
Q Consensus       267 T~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg  305 (423)
                      +.|.-|+ |+++|+.+||.|+.+|+..++--++||.+++.
T Consensus         4 ~~C~t~rka~~~L~~~gi~~~~~d~~k~p~s~~el~~~l~   43 (110)
T PF03960_consen    4 PNCSTCRKALKWLEENGIEYEFIDYKKEPLSREELRELLS   43 (110)
T ss_dssp             TT-HHHHHHHHHHHHTT--EEEEETTTS---HHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHcCCCeEeehhhhCCCCHHHHHHHHH
Confidence            4577555 99999999999999999877777788887765

This system transports arsenite and antimonite out of the cell. The pump is composed of two polypeptides, the products of the arsA and arsB genes. This two-subunit enzyme produces resistance to arsenite and antimonite. Arsenate, however, must first be reduced to arsenite before it is extruded. A third gene, arsC, expands the substrate specificity to allow for arsenate pumping and resistance. ArsC is an approximately 150-residue arsenate reductase that uses reduced glutathione (GSH) to convert arsenate to arsenite with a redox active cysteine residue in the active site. ArsC forms an active quaternary complex with GSH, arsenate, and glutaredoxin 1 (Grx1). The three ligands must be present simultaneously for reduction to occur []. The arsC family also comprises the Spx proteins which are GRAM-positive bacterial transcription factors that regulate the transcription of multiple genes in response to disulphide stress []. The arsC protein structure has been solved []. It belongs to the thioredoxin superfamily fold which is defined by a beta-sheet core surrounded by alpha-helices. The active cysteine residue of ArsC is located in the loop between the first beta-strand and the first helix, which is also conserved in the Spx protein and its homologues.; PDB: 2KOK_A 1SK1_A 1SK2_A 1JZW_A 1J9B_A 1S3C_A 1SD8_A 1SD9_A 1I9D_A 1SK0_A ....

>PRK14295 chaperone protein DnaJ; Provisional

Probab=83.40  E-value=0.86  Score=47.41  Aligned_cols=51  Identities=35%  Similarity=0.785  Sum_probs=32.0

Q ss_pred             ccccccCccce------EeCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCcc---cCCCCC
Q 045109          357 GACEACGDVRF------VPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLT---RCPICC  422 (423)
Q Consensus       357 ~~C~~CGG~rf------VpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLi---rCp~C~  422 (423)
                      ..|..|.|.+.      ..|..|+|+-.++..-         +.   +   ....+|+.|+-.|.+   +|+.|.
T Consensus       167 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~---------g~---~---~~~~~C~~C~G~G~~~~~~C~~C~  226 (389)
T PRK14295        167 APCPACSGTGAKNGTTPRVCPTCSGTGQVSRNS---------GG---F---SLSEPCPDCKGRGLIADDPCLVCK  226 (389)
T ss_pred             ccCCCCcccccCCCCCCcCCCCCCCEeEEEEEe---------cc---e---EEEEecCCCcceeEEeccCCCCCC
Confidence            45777777653      6788888887655431         10   0   124678888888865   477763

>PRK14301 chaperone protein DnaJ; Provisional

Probab=83.35  E-value=0.9  Score=46.97  Aligned_cols=50  Identities=30%  Similarity=0.715  Sum_probs=30.2

Q ss_pred             ccccccCccce------EeCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCcc---cCCCC
Q 045109          357 GACEACGDVRF------VPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLT---RCPIC  421 (423)
Q Consensus       357 ~~C~~CGG~rf------VpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLi---rCp~C  421 (423)
                      ..|..|.|.+.      ..|..|+|+-.+....         |.     .. ....|+.|+-.|.+   +|+.|
T Consensus       145 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~---------G~-----~~-~~~~C~~C~G~G~~~~~~C~~C  203 (373)
T PRK14301        145 VTCDDCGGSGAAPGTSPETCRHCGGSGQVRQSQ---------GF-----FQ-IAVPCPVCRGEGRVITHPCPKC  203 (373)
T ss_pred             ccCCCCCCcccCCCCCCcccCCccCeeEEEEEe---------ee-----EE-EEEeCCCCCceeeecCCCCCCC
Confidence            45777777653      5688888876655331         00     00 24678888777754   57666

>PRK14296 chaperone protein DnaJ; Provisional

Probab=83.21  E-value=0.91  Score=46.95  Aligned_cols=38  Identities=29%  Similarity=0.767  Sum_probs=29.9

Q ss_pred             CccccccCccceE---------------eCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCcc
Q 045109          356 VGACEACGDVRFV---------------PCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLT  416 (423)
Q Consensus       356 ~~~C~~CGG~rfV---------------pC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLi  416 (423)
                      ...|..|+|.+.+               +|+.|+|.-++..                       .+|+.|+-.|.+
T Consensus       166 ~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~~~-----------------------~~C~~C~G~g~v  218 (372)
T PRK14296        166 IHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIK-----------------------NKCKNCKGKGKY  218 (372)
T ss_pred             CccCCCCCCCceEEEEEeccceEEEEEecCCCcCCcceeec-----------------------ccccCCCCceEE
Confidence            3569999998754               7999999987753                       259999988865

>PRK14277 chaperone protein DnaJ; Provisional

Probab=83.16  E-value=0.99  Score=46.84  Aligned_cols=55  Identities=22%  Similarity=0.600  Sum_probs=30.7

Q ss_pred             ccccccCccc------eEeCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCcc---cCCCCC
Q 045109          357 GACEACGDVR------FVPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLT---RCPICC  422 (423)
Q Consensus       357 ~~C~~CGG~r------fVpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLi---rCp~C~  422 (423)
                      ..|..|.|.+      ...|..|+|+-.++..-..-     -|.    .  -....|+.|+-.|.+   +|+.|.
T Consensus       156 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~-----~G~----~--~~~~~C~~C~G~G~~~~~~C~~C~  219 (386)
T PRK14277        156 EKCDVCKGSGAKPGSKPVTCPVCHGTGQVRTRQNTP-----FGR----I--VNIRTCDRCHGEGKIITDPCNKCG  219 (386)
T ss_pred             ccCCCCCCCCcCCCCCCccCCCCCCEEEEEEEEecc-----Cce----E--EEEEECCCCCcceeeccCCCCCCC
Confidence            4577776654      46788888886654331000     000    0  013578888877755   477663

>PF13901 DUF4206: Domain of unknown function (DUF4206)

Probab=83.13  E-value=0.41  Score=45.63  Aligned_cols=88  Identities=23%  Similarity=0.443  Sum_probs=59.0

Q ss_pred             CCCceEeCCEEEcchHHHHHHHHcCchHHHHcccccccCCCCCCCccccccCccceEeCCCCCCcceeccccchhhhccc
Q 045109          312 GLPRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEMIDDGGRGNVGACEACGDVRFVPCETCSGSCKIYYEKEEEVEEDS  391 (423)
Q Consensus       312 TVPQVFVdGe~IGGaDEV~~LhEsGeL~kLL~~~~~~~~~~~g~~~~C~~CGG~rfVpC~~C~GS~Kv~~~~~~~~~~~~  391 (423)
                      ..|.-+++.-++=...+|.++ .+|.|.+.|+.+-..-.   ..-..|+-|.+.+| .|+.|+.+ .+++.-+       
T Consensus       102 ~~~~hl~~~~~~YSl~DL~~v-~~G~L~~~L~~l~~~~~---~HV~~C~lC~~kGf-iCe~C~~~-~~IfPF~-------  168 (202)
T PF13901_consen  102 QPRDHLLEDPHLYSLADLVQV-KSGQLLPQLEKLVQFAE---KHVYSCELCQQKGF-ICEICNSD-DIIFPFQ-------  168 (202)
T ss_pred             cchhhhhhCCceEcHHHHHHH-hhchHHHHHHHHHHHHH---HHHHHhHHHHhCCC-CCccCCCC-CCCCCCC-------
Confidence            356666666777778888887 47899998876532210   01236999999998 89999998 6665511       


Q ss_pred             CCCCccccCccceeeCCCCCCCC------cccCCCC
Q 045109          392 EGGWVGEEADFGFQRCPDCNENG------LTRCPIC  421 (423)
Q Consensus       392 ~~~~~~~~~~~~~~RC~~CNENG------LirCp~C  421 (423)
                               .....||+.|+--=      ...||.|
T Consensus       169 ---------~~~~~~C~~C~~v~H~~C~~~~~CpkC  195 (202)
T PF13901_consen  169 ---------IDTTVRCPKCKSVFHKSCFRKKSCPKC  195 (202)
T ss_pred             ---------CCCeeeCCcCccccchhhcCCCCCCCc
Confidence                     11478999987421      1557777

>PRK14276 chaperone protein DnaJ; Provisional

Probab=83.11  E-value=0.9  Score=47.03  Aligned_cols=56  Identities=25%  Similarity=0.544  Sum_probs=33.3

Q ss_pred             CccccccCccce------EeCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCcc---cCCCCC
Q 045109          356 VGACEACGDVRF------VPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLT---RCPICC  422 (423)
Q Consensus       356 ~~~C~~CGG~rf------VpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLi---rCp~C~  422 (423)
                      ...|..|.|.+.      ..|..|+|+-.+...-...     -|      .--....|+.|+-.|-+   +|+.|.
T Consensus       146 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~-----~G------~~~~~~~C~~C~G~G~~~~~~C~~C~  210 (380)
T PRK14276        146 EATCHTCNGSGAKPGTSPVTCGKCHGSGVITVDTQTP-----LG------MMRRQVTCDVCHGTGKEIKEPCQTCH  210 (380)
T ss_pred             cccCCCCcCcccCCCCCCccCCCCCCeeEEEEEEecC-----Cc------eEEEEEECCCCCCCCccccCCCCCCC
Confidence            346888887664      6799999987665431000     00      00014578888877754   577773

>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional

Probab=83.02  E-value=2.3  Score=45.24  Aligned_cols=62  Identities=18%  Similarity=0.171  Sum_probs=39.5

Q ss_pred             hcCCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhC-----CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCE
Q 045109          248 KCGKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGL-----GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKK  321 (423)
Q Consensus       248 li~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~-----gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe  321 (423)
                      +-+.-.|.+|.       ...||+|. |+++++.+     .|..+.+|....+    ++.+..    +-.+||++||||+
T Consensus       114 ~~~~~~i~~fv-------~~~Cp~Cp~~v~~~~~~a~~~~~i~~~~id~~~~~----~~~~~~----~v~~VP~~~i~~~  178 (517)
T PRK15317        114 LDGDFHFETYV-------SLSCHNCPDVVQALNLMAVLNPNITHTMIDGALFQ----DEVEAR----NIMAVPTVFLNGE  178 (517)
T ss_pred             cCCCeEEEEEE-------cCCCCCcHHHHHHHHHHHHhCCCceEEEEEchhCH----hHHHhc----CCcccCEEEECCc
Confidence            43456788994       45699886 55555443     5677777765332    333333    3348999999997


Q ss_pred             EEc
Q 045109          322 YIG  324 (423)
Q Consensus       322 ~IG  324 (423)
                      .+.
T Consensus       179 ~~~  181 (517)
T PRK15317        179 EFG  181 (517)
T ss_pred             EEE
Confidence            654

>PRK14297 chaperone protein DnaJ; Provisional

Probab=82.87  E-value=1  Score=46.64  Aligned_cols=56  Identities=23%  Similarity=0.607  Sum_probs=34.3

Q ss_pred             CccccccCccce------EeCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCcc---cCCCCC
Q 045109          356 VGACEACGDVRF------VPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLT---RCPICC  422 (423)
Q Consensus       356 ~~~C~~CGG~rf------VpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLi---rCp~C~  422 (423)
                      ...|..|.|.+.      ..|..|+|+-.++..... .    -|      .-....+|+.|+--|.+   +|+.|.
T Consensus       148 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~-~----~G------~~~~~~~C~~C~G~G~~~~~~C~~C~  212 (380)
T PRK14297        148 NENCETCNGTGAKPGTSPKTCDKCGGTGQIRVQRNT-P----LG------SFVSTTTCDKCGGSGKVIEDPCNKCH  212 (380)
T ss_pred             eccCCCcccccccCCCcCccCCCccCeEEEEEEEEc-C----Cc------eeEEEEeCCCCCCCceEcCCCCCCCC
Confidence            345888888664      579999999766543100 0    00      00124688888888865   577773

>PRK10767 chaperone protein DnaJ; Provisional

Probab=82.86  E-value=1.1  Score=46.19  Aligned_cols=38  Identities=32%  Similarity=0.734  Sum_probs=29.4

Q ss_pred             ccccccCccceE-----------eCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCccc
Q 045109          357 GACEACGDVRFV-----------PCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLTR  417 (423)
Q Consensus       357 ~~C~~CGG~rfV-----------pC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLir  417 (423)
                      ..|..|.|.+.+           +|..|+|.-++..                       .+|..|+-.|.++
T Consensus       160 ~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~-----------------------~~C~~C~G~g~v~  208 (371)
T PRK10767        160 KTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKIIK-----------------------DPCKKCHGQGRVE  208 (371)
T ss_pred             ccCCCCCCeeEEEEeeceEEEEEeCCCCCCceeECC-----------------------CCCCCCCCCceEe
Confidence            469999998766           5999999977642                       2599999888653

>PRK14291 chaperone protein DnaJ; Provisional

Probab=82.86  E-value=0.94  Score=46.91  Aligned_cols=51  Identities=37%  Similarity=0.702  Sum_probs=34.2

Q ss_pred             CccccccCccc------eEeCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCcc--cCCCC
Q 045109          356 VGACEACGDVR------FVPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLT--RCPIC  421 (423)
Q Consensus       356 ~~~C~~CGG~r------fVpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLi--rCp~C  421 (423)
                      ...|..|.|.+      ...|..|+|+-.++....+               ......|+.|+--|.+  .|+.|
T Consensus       156 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~---------------~~~~~~C~~C~G~G~~~~~C~~C  214 (382)
T PRK14291        156 YVPCEACGGTGYDPGSGEKVCPTCGGSGEIYQRGGF---------------FRISQTCPTCGGEGVLREPCSKC  214 (382)
T ss_pred             eccCCCCccccCCCCCCCccCCCCCCceEEEEecce---------------EEEEecCCCCCCceEEccCCCCC
Confidence            35688888866      5679999999776654210               0124678888888854  47766

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=82.73  E-value=1  Score=47.56  Aligned_cols=17  Identities=24%  Similarity=0.413  Sum_probs=12.0

Q ss_pred             HHHHHHHHHHhhhcCCC
Q 045109          199 PDVIKTFRKSFQELSPR  215 (423)
Q Consensus       199 p~~is~frkal~~~~~~  215 (423)
                      .+|-.||||.....-|+
T Consensus        43 ~eIKkAYrkla~k~HPD   59 (421)
T PTZ00037         43 SEIKKAYRKLAIKHHPD   59 (421)
T ss_pred             HHHHHHHHHHHHHHCCC
Confidence            56889999876665444

>TIGR01068 thioredoxin thioredoxin

Probab=82.68  E-value=16  Score=28.64  Aligned_cols=59  Identities=14%  Similarity=0.302  Sum_probs=35.9

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-H----HHHHHhCC--CcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCE
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-V----RVILKGLG--VRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKK  321 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-V----K~LL~~~g--V~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe  321 (423)
                      ...|+||+.      .++|+.|. +    +++.+.++  +.|-..|.+.+.    ++.+.++    ..++|.+++  +|+
T Consensus        14 ~~~vvi~f~------~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~----~~~~~~~----v~~~P~~~~~~~g~   79 (101)
T TIGR01068        14 DKPVLVDFW------APWCGPCKMIAPILEELAKEYEGKVKFVKLNVDENP----DIAAKYG----IRSIPTLLLFKNGK   79 (101)
T ss_pred             CCcEEEEEE------CCCCHHHHHhCHHHHHHHHHhcCCeEEEEEECCCCH----HHHHHcC----CCcCCEEEEEeCCc
Confidence            346777764      37898776 3    33333443  777788876443    4444443    458998777  775


Q ss_pred             EE
Q 045109          322 YI  323 (423)
Q Consensus       322 ~I  323 (423)
                      .+
T Consensus        80 ~~   81 (101)
T TIGR01068        80 EV   81 (101)
T ss_pred             Ee
Confidence            43

Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model.

>PRK14288 chaperone protein DnaJ; Provisional

Probab=82.66  E-value=1.1  Score=46.33  Aligned_cols=50  Identities=24%  Similarity=0.655  Sum_probs=28.9

Q ss_pred             ccccccCccce-----EeCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCcc---cCCCC
Q 045109          357 GACEACGDVRF-----VPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLT---RCPIC  421 (423)
Q Consensus       357 ~~C~~CGG~rf-----VpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLi---rCp~C  421 (423)
                      ..|..|.|.+.     ..|..|+|+-.+.....+              . .....|+.|+-.|.+   +|+.|
T Consensus       141 ~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~g~--------------~-~~~~~C~~C~G~G~~~~~~C~~C  198 (369)
T PRK14288        141 SVCESCDGTGAKDKALETCKQCNGQGQVFMRQGF--------------M-SFAQTCGACQGKGKIIKTPCQAC  198 (369)
T ss_pred             ccCCCCCCcccCCCCCcCCCCCCCCcEEEEEece--------------E-EEEEecCCCCCCceEccccCccC
Confidence            35777777553     457788877665543100              0 123467777777743   46666

>PRK14288 chaperone protein DnaJ; Provisional

Probab=82.53  E-value=1.1  Score=46.35  Aligned_cols=39  Identities=26%  Similarity=0.641  Sum_probs=30.7

Q ss_pred             CccccccCccceE-----------eCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCccc
Q 045109          356 VGACEACGDVRFV-----------PCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLTR  417 (423)
Q Consensus       356 ~~~C~~CGG~rfV-----------pC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLir  417 (423)
                      ...|..|+|.+.+           +|+.|+|.-++...                       .|+.|+-.|.++
T Consensus       156 ~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~-----------------------~C~~C~G~g~v~  205 (369)
T PRK14288        156 LETCKQCNGQGQVFMRQGFMSFAQTCGACQGKGKIIKT-----------------------PCQACKGKTYIL  205 (369)
T ss_pred             CcCCCCCCCCcEEEEEeceEEEEEecCCCCCCceEccc-----------------------cCccCCCcceEE
Confidence            4579999998865           69999999886422                       499999888763

>PRK14284 chaperone protein DnaJ; Provisional

Probab=82.33  E-value=1  Score=46.84  Aligned_cols=38  Identities=21%  Similarity=0.667  Sum_probs=29.9

Q ss_pred             CccccccCccce-----------EeCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCcc
Q 045109          356 VGACEACGDVRF-----------VPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLT  416 (423)
Q Consensus       356 ~~~C~~CGG~rf-----------VpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLi  416 (423)
                      ...|..|+|.+.           .+|+.|+|.-++..                       ..|+.|+-.|.+
T Consensus       175 ~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~-----------------------~~C~~C~G~g~v  223 (391)
T PRK14284        175 IKVCDRCKGSGQVVQSRGFFSMASTCPECGGEGRVIT-----------------------DPCSVCRGQGRI  223 (391)
T ss_pred             CeecCccCCeeEEEEEeceEEEEEECCCCCCCCcccC-----------------------CcCCCCCCccee
Confidence            356999999977           58999999976532                       259999988876

>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation

Probab=82.21  E-value=1.4  Score=34.77  Aligned_cols=25  Identities=32%  Similarity=0.733  Sum_probs=18.1

Q ss_pred             CccccccCccceE---------------eCCCCCCcceec
Q 045109          356 VGACEACGDVRFV---------------PCETCSGSCKIY  380 (423)
Q Consensus       356 ~~~C~~CGG~rfV---------------pC~~C~GS~Kv~  380 (423)
                      ...|..|.|.+++               +|+.|+|+-+++
T Consensus        15 ~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i   54 (66)
T PF00684_consen   15 PKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKII   54 (66)
T ss_dssp             -EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE-
T ss_pred             CcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeEE
Confidence            5679999997765               799999998887

DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.

>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs

Probab=82.20  E-value=4.2  Score=31.32  Aligned_cols=61  Identities=18%  Similarity=0.109  Sum_probs=41.4

Q ss_pred             CCCcHH-HHHHHHHhCCCcEEEEECCCCh--hhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHH
Q 045109          267 TYEDCC-HVRVILKGLGVRVDERDLSMHS--GFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRR  331 (423)
Q Consensus       267 T~c~Cc-~VK~LL~~~gV~yeErDVsmd~--~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~  331 (423)
                      ...+++ +|+-+|+..|+.|+.++++...  ....++.+.    ....++|.+-.+|..|.....+.+
T Consensus         7 ~~s~~~~~v~~~L~~~~l~~~~~~~~~~~~~~~~~~~~~~----nP~~~vP~L~~~~~~l~eS~aI~~   70 (73)
T cd03047           7 RSSINVQKVLWLLDELGLPYERIDAGGQFGGLDTPEFLAM----NPNGRVPVLEDGDFVLWESNAILR   70 (73)
T ss_pred             CCCcchHHHHHHHHHcCCCCEEEEeccccccccCHHHHhh----CCCCCCCEEEECCEEEECHHHHHH
Confidence            345554 6999999999999988876422  122344442    234589999888888877666654

GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.

>PRK14282 chaperone protein DnaJ; Provisional

Probab=82.10  E-value=1.3  Score=45.75  Aligned_cols=39  Identities=31%  Similarity=0.705  Sum_probs=30.6

Q ss_pred             CccccccCccceE---------------eCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCccc
Q 045109          356 VGACEACGDVRFV---------------PCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLTR  417 (423)
Q Consensus       356 ~~~C~~CGG~rfV---------------pC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLir  417 (423)
                      ...|..|.|.+.+               +|+.|+|.-++..                       .+|..|+..|.+.
T Consensus       169 ~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~-----------------------~~C~~C~G~g~v~  222 (369)
T PRK14282        169 YVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKIPG-----------------------EYCHECGGSGRIR  222 (369)
T ss_pred             CcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCcceeCC-----------------------CCCCCCCCceeEE
Confidence            3579999998764               6999999987642                       2599999988764

>PRK14298 chaperone protein DnaJ; Provisional

Probab=82.09  E-value=1.2  Score=46.12  Aligned_cols=56  Identities=23%  Similarity=0.651  Sum_probs=34.6

Q ss_pred             CccccccCccce------EeCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCcc---cCCCCC
Q 045109          356 VGACEACGDVRF------VPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLT---RCPICC  422 (423)
Q Consensus       356 ~~~C~~CGG~rf------VpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLi---rCp~C~  422 (423)
                      ...|..|.|.+.      ..|..|+|+-.++..-..-     .+      ..-....|+.|+-.|-+   +|+.|-
T Consensus       141 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~-----~g------~~~~~~~C~~C~G~G~~~~~~C~~C~  205 (377)
T PRK14298        141 AERCSTCSGTGAKPGTSPKRCPTCGGTGQVTTTRSTP-----LG------QFVTTTTCSTCHGRGQVIESPCPVCS  205 (377)
T ss_pred             eccCCCCCCCcccCCCCCCcCCCCCCccEEEEEEecC-----ce------eEEEEEeCCCCCCCCcccCCCCCCCC
Confidence            345888888665      6799999997665431100     00      00124678888888854   677773

>PRK14294 chaperone protein DnaJ; Provisional

Probab=82.09  E-value=1.2  Score=45.83  Aligned_cols=50  Identities=28%  Similarity=0.664  Sum_probs=32.1

Q ss_pred             ccccccCccce------EeCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCcc---cCCCC
Q 045109          357 GACEACGDVRF------VPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLT---RCPIC  421 (423)
Q Consensus       357 ~~C~~CGG~rf------VpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLi---rCp~C  421 (423)
                      ..|..|.|.+.      ..|..|+|+-.+....         |.     -. ....|+.|+-.|.+   +|+.|
T Consensus       145 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~---------G~-----~~-~~~~C~~C~G~G~~~~~~C~~C  203 (366)
T PRK14294        145 ETCEECHGSGCEPGTSPTTCPQCGGSGQVTQSQ---------GF-----FS-IRTTCPRCRGMGKVIVSPCKTC  203 (366)
T ss_pred             ccCCCCCCccccCCCCcccCCCcCCeEEEEEEe---------ee-----EE-EEeeCCCCCCcCeecCcCCCCC
Confidence            45888877664      5788888887655331         00     01 24678888888865   57776

>PRK14298 chaperone protein DnaJ; Provisional

Probab=82.03  E-value=1.1  Score=46.40  Aligned_cols=38  Identities=34%  Similarity=0.841  Sum_probs=29.4

Q ss_pred             ccccccCccceE---------------eCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCccc
Q 045109          357 GACEACGDVRFV---------------PCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLTR  417 (423)
Q Consensus       357 ~~C~~CGG~rfV---------------pC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLir  417 (423)
                      ..|..|.|.+.+               +|..|+|.-++..                       .+|+.|+-.|.+.
T Consensus       159 ~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~-----------------------~~C~~C~G~g~v~  211 (377)
T PRK14298        159 KRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQVIE-----------------------SPCPVCSGTGKVR  211 (377)
T ss_pred             CcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcccC-----------------------CCCCCCCCccEEE
Confidence            569999998754               7999999977542                       2599999888753

>PRK14286 chaperone protein DnaJ; Provisional

Probab=81.87  E-value=1.1  Score=46.19  Aligned_cols=38  Identities=29%  Similarity=0.795  Sum_probs=30.2

Q ss_pred             ccccccCccceE-----------eCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCccc
Q 045109          357 GACEACGDVRFV-----------PCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLTR  417 (423)
Q Consensus       357 ~~C~~CGG~rfV-----------pC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLir  417 (423)
                      ..|..|.|.+.+           +|..|+|.-++..                       .+|..|+-.|.++
T Consensus       168 ~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~-----------------------~~C~~C~G~g~~~  216 (372)
T PRK14286        168 TTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTVIS-----------------------NPCKTCGGQGLQE  216 (372)
T ss_pred             ccCCCCcCeEEEEEEeceEEEEEeCCCCCceeeEec-----------------------ccCCCCCCCcEEe
Confidence            579999998765           7999999987642                       2599999888764

>PRK14301 chaperone protein DnaJ; Provisional

Probab=81.56  E-value=1.1  Score=46.28  Aligned_cols=38  Identities=32%  Similarity=0.955  Sum_probs=30.1

Q ss_pred             ccccccCccce-----------EeCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCccc
Q 045109          357 GACEACGDVRF-----------VPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLTR  417 (423)
Q Consensus       357 ~~C~~CGG~rf-----------VpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLir  417 (423)
                      ..|..|.|.+.           .+|..|+|.-++..                       .+|+.|+-.|.++
T Consensus       162 ~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~-----------------------~~C~~C~G~g~v~  210 (373)
T PRK14301        162 ETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEGRVIT-----------------------HPCPKCKGSGIVQ  210 (373)
T ss_pred             cccCCccCeeEEEEEeeeEEEEEeCCCCCceeeecC-----------------------CCCCCCCCCceec
Confidence            56999999875           48999999988642                       2599999888763

>PRK14278 chaperone protein DnaJ; Provisional

Probab=81.52  E-value=1.1  Score=46.29  Aligned_cols=55  Identities=24%  Similarity=0.560  Sum_probs=32.7

Q ss_pred             CccccccCccc------eEeCCCCCCcceeccccchhhhcccCCCCccccCcc-ceeeCCCCCCCCcc---cCCCCC
Q 045109          356 VGACEACGDVR------FVPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADF-GFQRCPDCNENGLT---RCPICC  422 (423)
Q Consensus       356 ~~~C~~CGG~r------fVpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~-~~~RC~~CNENGLi---rCp~C~  422 (423)
                      ...|..|.|.+      ...|..|+|+-.++.....            ..+.+ ....|+.|+-.|-+   +|+.|.
T Consensus       139 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~------------~~g~~~~~~~C~~C~G~G~~~~~~C~~C~  203 (378)
T PRK14278        139 AVLCDRCHGKGTAGDSKPVTCDTCGGRGEVQTVQRS------------FLGQVMTSRPCPTCRGVGEVIPDPCHECA  203 (378)
T ss_pred             eccCCCCcCccCCCCCCceecCCccCceEEEEEEec------------cceeEEEEEECCCCCccceeeCCCCCCCC
Confidence            34588887765      4678888888665543100            00001 13578888887754   577774

>PRK14300 chaperone protein DnaJ; Provisional

Probab=81.33  E-value=1.2  Score=46.11  Aligned_cols=38  Identities=32%  Similarity=0.765  Sum_probs=29.4

Q ss_pred             CccccccCccceE-----------eCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCcc
Q 045109          356 VGACEACGDVRFV-----------PCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLT  416 (423)
Q Consensus       356 ~~~C~~CGG~rfV-----------pC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLi  416 (423)
                      ...|..|.|.+++           +|+.|+|.-++..                       .+|+.|+-.|.+
T Consensus       162 ~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~-----------------------~~C~~C~G~g~v  210 (372)
T PRK14300        162 VTTCDACSGVGATRMQQGFFTIEQACHKCQGNGQIIK-----------------------NPCKKCHGMGRY  210 (372)
T ss_pred             CccCCCccCeEEEEEeeceEEEEEeCCCCCccceEeC-----------------------CCCCCCCCceEE
Confidence            3569999999876           6999999877642                       259999988875

>PRK14281 chaperone protein DnaJ; Provisional

Probab=81.31  E-value=1.3  Score=46.28  Aligned_cols=53  Identities=30%  Similarity=0.773  Sum_probs=30.4

Q ss_pred             ccccccCccce-----EeCCCCCCcceeccccchhhhcccCCCCccccCcc-ceeeCCCCCCCCcc---cCCCC
Q 045109          357 GACEACGDVRF-----VPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADF-GFQRCPDCNENGLT---RCPIC  421 (423)
Q Consensus       357 ~~C~~CGG~rf-----VpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~-~~~RC~~CNENGLi---rCp~C  421 (423)
                      ..|..|.|.+.     ..|..|+|+-.+......            ..+.+ ....|+.|+-.|.+   +|+.|
T Consensus       164 ~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~------------~~g~~~~~~~C~~C~G~G~~~~~~C~~C  225 (397)
T PRK14281        164 VPCKECNGTGSKTGATETCPTCHGSGEVRQASKT------------MFGQFVNITACPTCGGEGRVVKDRCPAC  225 (397)
T ss_pred             ecCCCCCCcccCCCCCccCCCCCCCcEEEEEEec------------ccceEEEEEecCCCcceeeeeCCCCCCC
Confidence            45777766553     468888888665433100            00000 13578888888854   57766

>cd02989 Phd_like_TxnDC9 Phosducin (Phd)-like family, Thioredoxin (TRX) domain containing protein 9 (TxnDC9) subfamily; composed of predominantly uncharacterized eukaryotic proteins, containing a TRX-like domain without the redox active CXXC motif

Probab=81.29  E-value=12  Score=32.02  Aligned_cols=63  Identities=21%  Similarity=0.138  Sum_probs=38.3

Q ss_pred             hcCCCcEEEEEeCCCCCCCCCCcHHH-HHHHHH----hC-CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCce--EeC
Q 045109          248 KCGKEKLVVYFTSLRGIRKTYEDCCH-VRVILK----GL-GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRV--FVG  319 (423)
Q Consensus       248 li~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~----~~-gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQV--FVd  319 (423)
                      +-....||||+.      .++|+-|+ +..+|+    .+ ++.+..+|++...    ++.+.++    -.++|.+  |-+
T Consensus        19 i~~~~~vvV~f~------a~~c~~C~~~~p~l~~la~~~~~i~f~~Vd~~~~~----~l~~~~~----v~~vPt~l~fk~   84 (113)
T cd02989          19 VKSSERVVCHFY------HPEFFRCKIMDKHLEILAKKHLETKFIKVNAEKAP----FLVEKLN----IKVLPTVILFKN   84 (113)
T ss_pred             HhCCCcEEEEEE------CCCCccHHHHHHHHHHHHHHcCCCEEEEEEcccCH----HHHHHCC----CccCCEEEEEEC
Confidence            334577888864      57887555 554443    33 5788888886443    4555554    2356654  558


Q ss_pred             CEEEc
Q 045109          320 KKYIG  324 (423)
Q Consensus       320 Ge~IG  324 (423)
                      |+-|+
T Consensus        85 G~~v~   89 (113)
T cd02989          85 GKTVD   89 (113)
T ss_pred             CEEEE
Confidence            87554

The gene name for the human protein is TxnDC9. The two characterized members are described as Phd-like proteins, PLP1 of Saccharomyces cerevisiae and PhLP3 of Dictyostelium discoideum. Gene disruption experiments show that both PLP1 and PhLP3 are non-essential proteins. Unlike Phd and most Phd-like proteins, members of this group do not contain the Phd N-terminal helical domain which is implicated in binding to the G protein betagamma subunit.

>PRK14295 chaperone protein DnaJ; Provisional

Probab=81.07  E-value=1.3  Score=46.15  Aligned_cols=37  Identities=27%  Similarity=0.653  Sum_probs=28.9

Q ss_pred             ccccccCccce-----------EeCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCcc
Q 045109          357 GACEACGDVRF-----------VPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLT  416 (423)
Q Consensus       357 ~~C~~CGG~rf-----------VpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLi  416 (423)
                      ..|..|.|.+.           ++|+.|+|.-++..                       .+|..|+-.|.+
T Consensus       184 ~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~-----------------------~~C~~C~G~g~~  231 (389)
T PRK14295        184 RVCPTCSGTGQVSRNSGGFSLSEPCPDCKGRGLIAD-----------------------DPCLVCKGSGRA  231 (389)
T ss_pred             cCCCCCCCEeEEEEEecceEEEEecCCCcceeEEec-----------------------cCCCCCCCCceE
Confidence            56999999765           48999999987643                       259999888865

>PRK14280 chaperone protein DnaJ; Provisional

Probab=80.90  E-value=1.5  Score=45.41  Aligned_cols=38  Identities=29%  Similarity=0.807  Sum_probs=30.0

Q ss_pred             CccccccCccceE---------------eCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCcc
Q 045109          356 VGACEACGDVRFV---------------PCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLT  416 (423)
Q Consensus       356 ~~~C~~CGG~rfV---------------pC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLi  416 (423)
                      ...|..|.|.+.+               +|..|+|.-++..                       .+|+.|+-.|.+
T Consensus       160 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~-----------------------~~C~~C~G~g~v  212 (376)
T PRK14280        160 KETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQEIK-----------------------EKCPTCHGKGKV  212 (376)
T ss_pred             CccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCceec-----------------------CCCCCCCCceEE
Confidence            3569999998654               7999999977643                       259999988876

>TIGR02187 GlrX_arch Glutaredoxin-like domain protein

Probab=80.70  E-value=4.4  Score=38.14  Aligned_cols=54  Identities=13%  Similarity=0.279  Sum_probs=34.3

Q ss_pred             CCCCCcHHH-HHHHHHhC-----CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCC--E-EEcch
Q 045109          265 RKTYEDCCH-VRVILKGL-----GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGK--K-YIGGA  326 (423)
Q Consensus       265 RKT~c~Cc~-VK~LL~~~-----gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdG--e-~IGGa  326 (423)
                      ..++|+.|. ++.+|+.+     .|.+..+|++..    .++.+.++    -.++|.++|++  + ++|..
T Consensus       141 ~a~~C~~C~~~~~~l~~l~~~~~~i~~~~vD~~~~----~~~~~~~~----V~~vPtl~i~~~~~~~~G~~  203 (215)
T TIGR02187       141 VTPTCPYCPYAVLMAHKFALANDKILGEMIEANEN----PDLAEKYG----VMSVPKIVINKGVEEFVGAY  203 (215)
T ss_pred             ECCCCCCcHHHHHHHHHHHHhcCceEEEEEeCCCC----HHHHHHhC----CccCCEEEEecCCEEEECCC
Confidence            347899887 67777654     366666776543    34555444    45799999975  3 55543

This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.

>PRK14293 chaperone protein DnaJ; Provisional

Probab=80.65  E-value=1.3  Score=45.74  Aligned_cols=55  Identities=27%  Similarity=0.698  Sum_probs=34.6

Q ss_pred             CccccccCccc------eEeCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCcc---cCCCC
Q 045109          356 VGACEACGDVR------FVPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLT---RCPIC  421 (423)
Q Consensus       356 ~~~C~~CGG~r------fVpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLi---rCp~C  421 (423)
                      ...|..|.|.+      ...|..|+|+-.++..-..-     .|.     -. ...+|+.|+-.|-+   +|+.|
T Consensus       143 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~-----~g~-----~~-~~~~C~~C~G~G~~~~~~C~~C  206 (374)
T PRK14293        143 LETCETCRGSGAKPGTGPTTCSTCGGAGQVRRATRTP-----FGS-----FT-QVSECPTCNGTGQVIEDPCDAC  206 (374)
T ss_pred             cccCCCCCCcCCCCCCCCeeCCCCCCcceEEEEEecC-----cce-----EE-EEeeCCCCCcceeEeccCCCCC
Confidence            34588887755      45799999997765431100     000     00 13689999999976   67777

>PRK14279 chaperone protein DnaJ; Provisional

Probab=80.62  E-value=1.3  Score=46.25  Aligned_cols=39  Identities=28%  Similarity=0.816  Sum_probs=30.8

Q ss_pred             CccccccCccceE-----------eCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCccc
Q 045109          356 VGACEACGDVRFV-----------PCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLTR  417 (423)
Q Consensus       356 ~~~C~~CGG~rfV-----------pC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLir  417 (423)
                      ...|..|.|.+.+           +|+.|+|.-++..                       .+|..|+-.|.++
T Consensus       190 ~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~i~-----------------------~~C~~C~G~g~v~  239 (392)
T PRK14279        190 PKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSIIE-----------------------DPCEECKGTGVTT  239 (392)
T ss_pred             CCCCCCCcceEEEEEEecceEEEEecCCCCceeEEeC-----------------------CcCCCCCCCeEEE
Confidence            3579999998765           7999999988643                       2599999888763

>PRK14294 chaperone protein DnaJ; Provisional

Probab=80.16  E-value=1.4  Score=45.33  Aligned_cols=37  Identities=30%  Similarity=0.760  Sum_probs=28.7

Q ss_pred             ccccccCccceE-----------eCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCcc
Q 045109          357 GACEACGDVRFV-----------PCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLT  416 (423)
Q Consensus       357 ~~C~~CGG~rfV-----------pC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLi  416 (423)
                      ..|..|.|.+.+           +|+.|+|.-++..                       ..|..|+-.|.+
T Consensus       162 ~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~-----------------------~~C~~C~G~g~v  209 (366)
T PRK14294        162 TTCPQCGGSGQVTQSQGFFSIRTTCPRCRGMGKVIV-----------------------SPCKTCHGQGRV  209 (366)
T ss_pred             ccCCCcCCeEEEEEEeeeEEEEeeCCCCCCcCeecC-----------------------cCCCCCCCceEe
Confidence            469999998754           7999999987642                       259999988765

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	423
1t1v_A	93	SH3BGRL3, SH3 domain-binding glutamic acid-rich pr	2e-24
1u6t_A	121	SH3 domain-binding glutamic acid-rich-like protein	1e-20
2ct6_A	111	SH3 domain-binding glutamic acid-rich-like protein	3e-18
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-07
2e7p_A	116	Glutaredoxin; thioredoxin fold, poplar, electron t	8e-07
3rhb_A	113	ATGRXC5, glutaredoxin-C5, chloroplastic; thioredox	9e-07
2khp_A	92	Glutaredoxin; thioredoxin type domain, ssgcid, ele	4e-06
2ht9_A	146	Glutaredoxin-2; thioredoxin fold, iron-sulfur clus	8e-06
2cq9_A	130	GLRX2 protein, glutaredoxin 2; glutathione-S-trans	2e-05
3qmx_A	99	Glutaredoxin A, glutaredoxin 3; electron transport	2e-05
1fov_A	82	Glutaredoxin 3, GRX3; active site disulfide, CIS P	2e-05
1kte_A	105	Thioltransferase; redox-active center, electron tr	4e-05
3ctg_A	129	Glutaredoxin-2; reduced form, electron transport,	5e-05
3l4n_A	127	Monothiol glutaredoxin-6; C-terminal domain of GRX	7e-05
3h8q_A	114	Thioredoxin reductase 3; oxidoreductase, structura	9e-05
3c1r_A	118	Glutaredoxin-1; oxidized form, oxidoreductase, cyt	1e-04
2jad_A	362	Yellow fluorescent protein glutaredoxin fusion pro	2e-04
2hze_A	114	Glutaredoxin-1; thioredoxin fold, arsenic, dimethy	3e-04

>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A Length = 93

 Score = 95.2 bits (237), Expect = 2e-24
 Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 2/88 (2%)

Query: 253 KLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGG 312
            L VY TS+ G R+       V  IL G  ++    D+S  +  ++E++ L G+      
Sbjct: 3   GLRVYSTSVTGSREIKSQQSEVTRILDGKRIQYQLVDISQDNALRDEMRTLAGNP--KAT 60

Query: 313 LPRVFVGKKYIGGAEEIRRMHEEGQLEK 340
            P++  G  Y G  E      E+  L++
Sbjct: 61  PPQIVNGNHYCGDYELFVEAVEQDTLQE 88

>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A Length = 121

 Score = 85.8 bits (212), Expect = 1e-20
 Identities = 14/91 (15%), Positives = 33/91 (36%), Gaps = 4/91 (4%)

Query: 254 LVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGG- 312
           + VY  S  G     +    V   L+   +  +E+D++ +   +  ++E + +       
Sbjct: 2   IRVYIASSSGSTAIKKKQQDVLGFLEANKIGFEEKDIAANEENRKWMRENVPENSRPATG 61

Query: 313 ---LPRVFVGKKYIGGAEEIRRMHEEGQLEK 340
               P++F   +Y G  +      E   +  
Sbjct: 62  YPLPPQIFNESQYRGDYDAFFEARENNAVYA 92

>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 111

 Score = 79.2 bits (195), Expect = 3e-18
 Identities = 14/91 (15%), Positives = 31/91 (34%), Gaps = 4/91 (4%)

Query: 254 LVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGG- 312
           + V+  S  G     +    V   L+   +  +E D++M    +  + + +         
Sbjct: 10  IRVFIASSSGFVAIKKKQQDVVRFLEANKIEFEEVDITMSEEQRQWMYKNVPPEKKPTQG 69

Query: 313 ---LPRVFVGKKYIGGAEEIRRMHEEGQLEK 340
               P++F G +Y G  +      E   +  
Sbjct: 70  NPLPPQIFNGDRYCGDYDSFFESKESNTVFS 100

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.2 bits (124), Expect = 2e-07
 Identities = 55/339 (16%), Positives = 99/339 (29%), Gaps = 88/339 (25%)

Query: 45  HHQQHDDDQKVSDNQCNGDLL----DKF--DKSKRKSEEFSTGLIRAKEWSNMIQEKIPK 98
           HH  H D +         D+L    D F  +   +  ++    ++  +E  ++I  K   
Sbjct: 2   HHHHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAV 61

Query: 99  VV-----------PKTPVRTPPGEPETIN-AWELMEGL--EDVSPL-----------RSP 133
                         +  V+    E   IN  + LM  +  E   P            R  
Sbjct: 62  SGTLRLFWTLLSKQEEMVQKFVEEVLRINYKF-LMSPIKTEQRQPSMMTRMYIEQRDRLY 120

Query: 134 NHFRSFS-FDFARGP------SSLLDSDPP-------M-----SKLCEDVSAERKTMSM- 173
           N  + F+ ++ +R         +LL+  P        +     + +  DV    K     
Sbjct: 121 NDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKM 180

Query: 174 -----WLQMANGDDHGDSESNSKPFALEFDPDVIKTFRKSFQELSPRHPFH------LRP 222
                WL + N +         +    + DP+      +S    + +   H       R 
Sbjct: 181 DFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTS---RSDHSSNIKLRIHSIQAELRRL 237

Query: 223 LENDKLPAALDSLD-VKKSNGA-VLDHKCGKEKLVVYFTSLRGIRKTYEDCCHVRVILKG 280
           L++      L  L  V+ +      +  C   K+++          T       +V    
Sbjct: 238 LKSKPYENCLLVLLNVQNAKAWNAFNLSC---KILL----------TTRF---KQVTDFL 281

Query: 281 LGVRVDERDLSMHS-GF-KNELKELLGD--GFSGGGLPR 315
                    L  HS     +E+K LL          LPR
Sbjct: 282 SAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR 320

>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A Length = 116

 Score = 46.5 bits (111), Expect = 8e-07
 Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 14/99 (14%)

Query: 251 KEKLVVYFTSLRGIRKTYEDC--CH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDG 307
               VV F+      KTY  C  C+ V+ +L  +G      +L   S   ++L+  L   
Sbjct: 18  SSAPVVVFS------KTY--CGYCNRVKQLLTQVGASYKVVELDELSD-GSQLQSALAH- 67

Query: 308 FSGGG-LPRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGC 345
           ++G G +P VF+G K IGG + +   H+  +L  +++  
Sbjct: 68  WTGRGTVPNVFIGGKQIGGCDTVVEKHQRNELLPLLQDA 106

>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A* Length = 113

 Score = 46.5 bits (111), Expect = 9e-07
 Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 15/95 (15%)

Query: 251 KEKLVVYFTSLRGIRKTYEDCCH---VRVILKGLGVRVDERDLSMHSGFKNELKELLGDG 307
            E  VV ++      KT+  C +   V+ + K LGV+    +L        +L+++L   
Sbjct: 17  TENTVVIYS------KTW--CSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLER- 67

Query: 308 FSGGG--LPRVFVGKKYIGGAEEIRRMHEEGQLEK 340
              G   +P VFV  K+IGG  +  +++ +G LE 
Sbjct: 68  -LTGQHTVPNVFVCGKHIGGCTDTVKLNRKGDLEL 101

>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis} Length = 92

 Score = 44.1 bits (105), Expect = 4e-06
 Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 6/71 (8%)

Query: 271 CCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGG-LPRVFVGKKYIGGAEEI 329
           C   + +L   G   +E D S     + E++E      SG    P++F+G  ++GG +++
Sbjct: 19  CARAKALLARKGAEFNEIDASATPELRAEMQER-----SGRNTFPQIFIGSVHVGGCDDL 73

Query: 330 RRMHEEGQLEK 340
             + +EG+L+ 
Sbjct: 74  YALEDEGKLDS 84

>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A* Length = 146

 Score = 44.7 bits (106), Expect = 8e-06
 Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 18/96 (18%)

Query: 251 KEKLVVYFTSLRGIRKTYEDCCH---VRVILKGLGVRVDERDLSMHSG---FKNELKELL 304
            +  VV F+      KT   C +    + +   + V     +L +      F++ L ++ 
Sbjct: 47  SDNCVVIFS------KTS--CSYCTMAKKLFHDMNVNYKVVELDLLEYGNQFQDALYKMT 98

Query: 305 GDGFSGGGLPRVFVGKKYIGGAEEIRRMHEEGQLEK 340
           G       +PR+FV   +IGGA +  R+H+EG+L  
Sbjct: 99  G----ERTVPRIFVNGTFIGGATDTHRLHKEGKLLP 130

>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 130

 Score = 43.1 bits (102), Expect = 2e-05
 Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 16/95 (16%)

Query: 251 KEKLVVYFTSLRGIRKTYEDCCH---VRVILKGLGVRVDERDLSMHSGFKNELKELLGDG 307
            +  VV F+      KT   C +    + +   + V     +L +     N+ ++ L   
Sbjct: 25  SDNCVVIFS------KTS--CSYCTMAKKLFHDMNVNYKVVELDLLEY-GNQFQDALYK- 74

Query: 308 FSGGG--LPRVFVGKKYIGGAEEIRRMHEEGQLEK 340
              G   +PR+FV   +IGGA +  R+H+EG+L  
Sbjct: 75  -MTGERTVPRIFVNGTFIGGATDTHRLHKEGKLLP 108

>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} Length = 99

 Score = 42.2 bits (100), Expect = 2e-05
 Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 7/72 (9%)

Query: 271 CCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGG--LPRVFVGKKYIGGAEE 328
           C     +LK  GV   E  +   +  +  +        + G   LP++F+  ++IGG ++
Sbjct: 29  CMRALALLKRKGVEFQEYCIDGDNEAREAMAAR-----ANGKRSLPQIFIDDQHIGGCDD 83

Query: 329 IRRMHEEGQLEK 340
           I  +   G+L+ 
Sbjct: 84  IYALDGAGKLDP 95

>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A* Length = 82

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 15/71 (21%), Positives = 34/71 (47%), Gaps = 6/71 (8%)

Query: 271 CCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGG-LPRVFVGKKYIGGAEEI 329
           C   + +L   GV   E  +  ++  + E+ +      SG   +P++F+  ++IGG +++
Sbjct: 14  CHRAKALLSSKGVSFQELPIDGNAAKREEMIKR-----SGRTTVPQIFIDAQHIGGYDDL 68

Query: 330 RRMHEEGQLEK 340
             +   G L+ 
Sbjct: 69  YALDARGGLDP 79

>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A* Length = 105

 Score = 41.4 bits (98), Expect = 4e-05
 Identities = 13/32 (40%), Positives = 21/32 (65%)

Query: 314 PRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGC 345
           PRVF+GK+ IGG  ++  MH+ G+L   ++  
Sbjct: 70  PRVFIGKECIGGCTDLESMHKRGELLTRLQQV 101

>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A* Length = 129

 Score = 42.0 bits (99), Expect = 5e-05
 Identities = 8/32 (25%), Positives = 20/32 (62%)

Query: 314 PRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGC 345
           P V++  K+IGG  ++  + + G+L ++++  
Sbjct: 96  PNVYINGKHIGGNSDLETLKKNGKLAEILKPV 127

>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae} Length = 127

 Score = 41.2 bits (97), Expect = 7e-05
 Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 6/43 (13%)

Query: 314 PRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEMIDDGGRGNV 356
           P + V     GG EEI+++H +G+L +       +     G  
Sbjct: 72  PNLLVNGVSRGGNEEIKKLHTQGKLLE------SLQVWSDGKF 108

>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} Length = 114

 Score = 40.7 bits (96), Expect = 9e-05
 Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 16/98 (16%)

Query: 251 KEKLVVYFTSLRGIRKTYEDC--CH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDG 307
           +   VV F+      K+Y  C     V+ +   LGV  +  +L         ++E+L + 
Sbjct: 15  ERSRVVIFS------KSY--CPHSTRVKELFSSLGVECNVLELDQVDD-GARVQEVLSE- 64

Query: 308 FSGGG--LPRVFVGKKYIGGAEEIRRMHEEGQLEKVVE 343
                  +P +FV K ++GG ++  + ++ G L+K+++
Sbjct: 65  -ITNQKTVPNIFVNKVHVGGCDQTFQAYQSGLLQKLLQ 101

>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A* Length = 118

 Score = 40.8 bits (96), Expect = 1e-04
 Identities = 10/30 (33%), Positives = 23/30 (76%)

Query: 314 PRVFVGKKYIGGAEEIRRMHEEGQLEKVVE 343
           P +++  K+IGG ++++ + E G+LE+++E
Sbjct: 84  PNIYINGKHIGGNDDLQELRETGELEELLE 113

>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria} Length = 362

 Score = 42.8 bits (100), Expect = 2e-04
 Identities = 10/32 (31%), Positives = 23/32 (71%)

Query: 314 PRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGC 345
           P +++  K+IGG ++++ + E G+LE+++E  
Sbjct: 320 PNIYINGKHIGGNDDLQELRETGELEELLEPI 351

>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B Length = 114

 Score = 39.2 bits (92), Expect = 3e-04
 Identities = 9/32 (28%), Positives = 15/32 (46%)

Query: 314 PRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGC 345
           PR+F GK  IGG  ++  +     L  ++   
Sbjct: 77  PRIFFGKTSIGGYSDLLEIDNMDALGDILSSI 108

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	423
2wul_A	118	Glutaredoxin related protein 5; chromosome 14 open	99.86
3zyw_A	111	Glutaredoxin-3; metal binding protein; 1.84A {Homo	99.84
3gx8_A	121	Monothiol glutaredoxin-5, mitochondrial; TRX fold,	99.83
3ipz_A	109	Monothiol glutaredoxin-S14, chloroplastic; electro	99.82
1u6t_A	121	SH3 domain-binding glutamic acid-rich-like protein	99.82
2wem_A	118	Glutaredoxin-related protein 5; chromosome 14 open	99.82
2wci_A	135	Glutaredoxin-4; redox-active center, iron-sulfur c	99.79
3l4n_A	127	Monothiol glutaredoxin-6; C-terminal domain of GRX	99.79
3rhb_A	113	ATGRXC5, glutaredoxin-C5, chloroplastic; thioredox	99.77
3h8q_A	114	Thioredoxin reductase 3; oxidoreductase, structura	99.77
2ct6_A	111	SH3 domain-binding glutamic acid-rich-like protein	99.76
1wik_A	109	Thioredoxin-like protein 2; picot homology 2 domai	99.76
1t1v_A	93	SH3BGRL3, SH3 domain-binding glutamic acid-rich pr	99.75
2yan_A	105	Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {H	99.74
3qmx_A	99	Glutaredoxin A, glutaredoxin 3; electron transport	99.72
3ctg_A	129	Glutaredoxin-2; reduced form, electron transport,	99.68
3c1r_A	118	Glutaredoxin-1; oxidized form, oxidoreductase, cyt	99.67
1kte_A	105	Thioltransferase; redox-active center, electron tr	99.63
2jad_A	362	Yellow fluorescent protein glutaredoxin fusion pro	99.6
2hze_A	114	Glutaredoxin-1; thioredoxin fold, arsenic, dimethy	99.59
1aba_A	87	Glutaredoxin; electron transport; HET: MES; 1.45A	99.56
2cq9_A	130	GLRX2 protein, glutaredoxin 2; glutathione-S-trans	99.54
1fov_A	82	Glutaredoxin 3, GRX3; active site disulfide, CIS P	99.54
2khp_A	92	Glutaredoxin; thioredoxin type domain, ssgcid, ele	99.53
2ht9_A	146	Glutaredoxin-2; thioredoxin fold, iron-sulfur clus	99.52
2klx_A	89	Glutaredoxin; thioredoxin type domain, ssgcid, ele	99.51
2lqo_A	92	Putative glutaredoxin RV3198.1/MT3292; TRX fold, o	99.39
3msz_A	89	Glutaredoxin 1; alpha-beta sandwich, center for st	99.36
2x8g_A	598	Thioredoxin glutathione reductase; redox-active ce	99.26
3nzn_A	103	Glutaredoxin; structural genomics, PSI2, MCSG, pro	99.19
1ego_A	85	Glutaredoxin; electron transport; NMR {Escherichia	99.15
2e7p_A	116	Glutaredoxin; thioredoxin fold, poplar, electron t	99.13
1nm3_A	241	Protein HI0572; hybrid, peroxiredoxin, glutaredoxi	99.1
3ic4_A	92	Glutaredoxin (GRX-1); structural genomics, PSI, MC	98.98
1h75_A	81	Glutaredoxin-like protein NRDH; electron transport	98.84
1r7h_A	75	NRDH-redoxin; thioredoxin, glutaredoxin, redox pro	98.71
2k8s_A	80	Thioredoxin; dimer, structural genomics, PSI-2, pr	98.53
1wjk_A	100	C330018D20RIK protein; glutaredoxin, thioredoxin f	98.35
1ttz_A	87	Conserved hypothetical protein; structural genomic	98.16
2axo_A	270	Hypothetical protein ATU2684; alpha beta protein.,	97.9
2fgx_A	107	Putative thioredoxin; NET3, NESG, GFT-glutaredoxin	97.88
1z3e_A	132	Regulatory protein SPX; bacterial transcription re	97.69
1rw1_A	114	Conserved hypothetical protein YFFB; thioredoxin f	97.49
2kok_A	120	Arsenate reductase; brucellosis, zoonotic, oxidore	97.41
3l78_A	120	Regulatory protein SPX; transcription, transcripti	97.02
3rdw_A	121	Putative arsenate reductase; structural genomics,	96.74
3gkx_A	120	Putative ARSC family related protein; ARSC family	96.73
1s3c_A	141	Arsenate reductase; ARSC, arsenite, oxidoreductase	96.65
3fz4_A	120	Putative arsenate reductase; APC61768, structural	96.64
1nho_A	85	Probable thioredoxin; beta sheet, alpha helix, oxi	96.54
3kp9_A	291	Vkorc1/thioredoxin domain protein; warfarin, disul	96.17
3f0i_A	119	Arsenate reductase; structural genomics, IDP01300,	96.08
3kp8_A	106	Vkorc1/thioredoxin domain protein; blood coagulati	96.08
1fo5_A	85	Thioredoxin; disulfide oxidoreductase, structural	96.02
2l6c_A	110	Thioredoxin; oxidoreductase; NMR {Desulfovibrio vu	95.82
1hyu_A	521	AHPF, alkyl hydroperoxide reductase subunit F; thi	95.67
3ir4_A	218	Glutaredoxin 2; glutathione, IDP00895, structural	95.4
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	95.07
2hls_A	243	Protein disulfide oxidoreductase; thioredoxin fold	94.48
4f03_A	253	Glutathione transferase; GST fold; 1.80A {Phaneroc	94.4
3gyk_A	175	27KDA outer membrane protein; APC61738.2, siliciba	94.1
1zma_A	118	Bacterocin transport accessory protein; alpha-beta	93.85
1ilo_A	77	Conserved hypothetical protein MTH895; beta-alpha-	93.75
3fy7_A	250	Chloride intracellular channel protein 3; GST, glu	93.73
2cz2_A	223	Maleylacetoacetate isomerase; structural genomics,	93.68
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	93.64
2e0q_A	104	Thioredoxin; electron transport; 1.49A {Sulfolobus	93.43
3vln_A	241	GSTO-1, glutathione S-transferase omega-1; GST fol	93.29
1k0m_A	241	CLIC1, NCC27, chloride intracellular channel prote	93.28
3m9j_A	105	Thioredoxin; oxidoreductase; 1.10A {Homo sapiens}	93.25
1z9h_A	290	Membrane-associated prostaglandin E synthase-2; me	93.09
2yzu_A	109	Thioredoxin; redox protein, electron transport, st	93.08
1w4v_A	119	Thioredoxin, mitochondrial; antioxidant enzyme, mi	93.06
1thx_A	115	Thioredoxin, thioredoxin 2; oxido-reductase, elect	93.04
1e6b_A	221	Glutathione S-transferase; 1.65A {Arabidopsis thal	93.0
2ahe_A	267	Chloride intracellular channel protein 4; glutathi	92.99
4g10_A	265	Glutathione S-transferase homolog; thioredoxin fol	92.98
3f3q_A	109	Thioredoxin-1; His TAG, electron transport, cytopl	92.98
2i4a_A	107	Thioredoxin; acidophIle, disulfide exchange, oxido	92.82
1syr_A	112	Thioredoxin; SGPP, structural genomics, PSI, prote	92.81
1axd_A	209	Glutathione S-transferase I; transferase, herbicid	92.8
4hi7_A	228	GI20122; GST, glutathione S-transferase, enzyme fu	92.77
1yy7_A	213	SSPA, stringent starvation protein A; GST fold, tr	92.68
3die_A	106	Thioredoxin, TRX; electron transport, SWAP domain,	92.65
3lyp_A	215	Stringent starvation protein A; structural genomic	92.63
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	92.62
4iel_A	229	Glutathione S-transferase, N-terminal domain PROT;	92.57
1v98_A	140	Thioredoxin; oxidoreductase, structural genomics,	92.55
2oe3_A	114	Thioredoxin-3; electron transport, alpha/beta sand	92.48
1aw9_A	216	Glutathione S-transferase III; herbicide detoxific	92.43
3q18_A	239	GSTO-2, glutathione S-transferase omega-2; glutath	92.38
3rbt_A	246	Glutathione transferase O1; glutathione S-transfer	92.36
1nsw_A	105	Thioredoxin, TRX; thermostability, electron transp	92.28
3qav_A	243	RHO-class glutathione S-transferase; cytosol; 2.10	92.23
3qfa_C	116	Thioredoxin; protein-protein complex, rossmann fol	92.21
1gnw_A	211	Glutathione S-transferase; herbicide detoxificatio	92.21
3lyk_A	216	Stringent starvation protein A homolog; structural	92.12
2v6k_A	214	Maleylpyruvate isomerase; glutathione-S-transferas	92.07
1fb6_A	105	Thioredoxin M; electron transport; 2.10A {Spinacia	92.06
3gnj_A	111	Thioredoxin domain protein; APC92103, STR genomics	92.04
2vim_A	104	Thioredoxin, TRX; thioredoxin fold, oxidoreductase	91.99
1zl9_A	207	GST class-sigma, glutathione S-transferase 5; glut	91.92
2r4v_A	247	XAP121, chloride intracellular channel protein 2;	91.8
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	91.78
2vm1_A	118	Thioredoxin, thioredoxin H isoform 1.; oxidoreduct	91.74
3d6i_A	112	Monothiol glutaredoxin-3; thioredoxin-like, electr	91.56
2vo4_A	219	2,4-D inducible glutathione S-transferase; herbici	91.5
1ti3_A	113	Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Popul	91.47
2voc_A	112	Thioredoxin; electron transport, homodimer, disulf	91.38
1oyj_A	231	Glutathione S-transferase; herbicide detoxificatio	91.31
2wz9_A	153	Glutaredoxin-3; protein binding; 1.55A {Homo sapie	91.3
1dby_A	107	Chloroplast thioredoxin M CH2; thioredoxin CH2, ch	91.19
2imi_A	221	Epsilon-class glutathione S-transferase; HET: GSH;	91.16
2trx_A	108	Thioredoxin; electron transport; 1.68A {Escherichi	91.15
1gwc_A	230	Glutathione S-transferase TSI-1; herbicide detoxif	91.12
3n5o_A	235	Glutathione transferase; seattle structural genomi	91.06
2c3n_A	247	Glutathione S-transferase theta 1; glutathione tra	91.01
1xfl_A	124	Thioredoxin H1; AT3G51030, structural genomics, pr	91.01
1pn9_A	209	GST class-delta, glutathione S-transferase 1-6; pr	91.01
3niv_A	222	Glutathione S-transferase; structural genomics, PS	90.92
3bby_A	215	Uncharacterized GST-like protein YFCF; NP_416804.1	90.86
2a2r_A	210	Glutathione S-transferase P; detoxification, nitri	90.82
1v2a_A	210	Glutathione transferase GST1-6; glutathione S-tran	90.79
1okt_A	211	Glutathione S-transferase; GST; 1.9A {Plasmodium f	90.78
4hoj_A	210	REGF protein; GST, glutathione S-transferase, enzy	90.74
2j23_A	121	Thioredoxin; immune protein, autoreactivity, cross	90.74
1gh2_A	107	Thioredoxin-like protein; redox-active center, ele	90.72
2l57_A	126	Uncharacterized protein; structural genomics, unkn	90.66
2cvd_A	198	Glutathione-requiring prostaglandin D synthase; gl	90.58
1r26_A	125	Thioredoxin; redox-active disulfide, electron tran	90.45
3hxs_A	141	Thioredoxin, TRXP; electron transport; 2.00A {Bact	90.44
3lxz_A	229	Glutathione S-transferase family protein; structur	90.43
3iv4_A	112	Putative oxidoreductase; APC23140, meticillin-resi	90.38
1xwb_A	106	Thioredoxin; dimerization, redox regulation, THI X	90.33
3tco_A	109	Thioredoxin (TRXA-1); disulfide oxidoreductase, ox	90.3
3m3m_A	210	Glutathione S-transferase; PSI-II, structural geno	90.19
2vlu_A	122	Thioredoxin, thioredoxin H isoform 2.; oxidoreduct	90.15
4dej_A	231	Glutathione S-transferase related protein; transfe	90.14
1t00_A	112	Thioredoxin, TRX; redox regulation, multifunction	90.13
3uvt_A	111	Thioredoxin domain-containing protein 5; thioredox	90.1
3ay8_A	216	Glutathione S-transferase; GST fold, GST binding,	90.06
1ep7_A	112	Thioredoxin CH1, H-type; electron transport; 2.10A	89.97
3m0f_A	213	Uncharacterized protein GST_N; PSI-2, NYSGXRC, glu	89.89
1r5a_A	218	Glutathione transferase; glutathione S-transferase	89.85
1yq1_A	208	Glutathione S-transferase; nematoda, structural ge	89.82
2o8v_B	128	Thioredoxin 1; disulfide crosslinked complex, oxid	89.81
3ein_A	209	GST class-theta, glutathione S-transferase 1-1; de	89.78
1faa_A	124	Thioredoxin F; electron transport; 1.85A {Spinacia	89.69
3emx_A	135	Thioredoxin; structural genomics, oxidoreductase,	89.65
3m8n_A	225	Possible glutathione S-transferase; PSI-II, struct	89.63
3cbu_A	214	Probable GST-related protein; thioredoxin fold, GS	89.62
1ljr_A	244	HGST T2-2, glutathione S-transferase; HET: GSH; 3.	89.62
2pu9_C	111	TRX-F, thioredoxin F-type, chloroplast; protein-pr	89.5
1k0d_A	260	URE2 protein; nitrate assimilation, structural gen	89.43
3ibh_A	233	GST-II, saccharomyces cerevisiae GTT2; glutathione	89.38
2gsq_A	202	Squid GST, glutathione S-transferase; squid digest	89.36
1zzo_A	136	RV1677; thioredoxin fold, structural genomics, PSI	89.08
3ic8_A	310	Uncharacterized GST-like proteinprotein; glutathio	88.95
2i1u_A	121	Thioredoxin, TRX, MPT46; redox protein, electron t	88.81
1mek_A	120	Protein disulfide isomerase; electron transport, r	88.75
2xc2_A	117	Thioredoxinn; oxidoreductase, protein disulfide re	88.72
4euy_A	105	Uncharacterized protein; structural genomics, PSI-	88.67
3gtu_B	224	Glutathione S-transferase; conjugation, detoxifica	88.65
3p2a_A	148	Thioredoxin 2, putative thioredoxin-like protein;	88.41
1t3b_A	211	Thiol:disulfide interchange protein DSBC; oxidored	88.3
3f6d_A	219	Adgstd4-4, glutathione transferase GST1-4; HET: GT	88.28
2on5_A	206	Nagst-2, Na glutathione S-transferase 2; hookworm;	88.18
3aps_A	122	DNAJ homolog subfamily C member 10; thioredoxin fo	88.13
3hz4_A	140	Thioredoxin; NYSGXRC, PSI-II, reduced form, protei	88.03
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	88.02
1eej_A	216	Thiol:disulfide interchange protein; oxidoreductas	87.89
3ubk_A	242	Glutathione transferase; GSH binding; 1.95A {Lepto	87.75
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	87.74
3r2q_A	202	Uncharacterized GST-like protein YIBF; transferase	87.73
4ags_A	471	Thiol-dependent reductase 1; transferase, leishman	87.72
2f51_A	118	Thioredoxin; electron transport; 1.90A {Trichomona	87.71
3ik7_A	222	Glutathione S-transferase A4; human GST A4-4, enzy	87.6
3tou_A	226	Glutathione S-transferase protein; GSH binding sit	87.46
2ju5_A	154	Thioredoxin disulfide isomerase; protein, oxidored	87.35
4hz2_A	230	Glutathione S-transferase domain; glutathione,enzy	87.35
2dj1_A	140	Protein disulfide-isomerase A4; protein ERP-72, ER	87.12
1tw9_A	206	Glutathione S-transferase 2; 1.71A {Heligmosomoide	87.07
2ws2_A	204	NU-class GST, glutathione S-transferase; parasite,	86.59
2on7_A	206	Nagst-1, Na glutathione S-transferase 1; hookworm;	86.4
2yv7_A	260	CG10997-PA, LD46306P, CLIC; dmclic, chloride ION c	86.33
2l5l_A	136	Thioredoxin; structural genomics, electron transpo	86.33
3d22_A	139	TRXH4, thioredoxin H-type; electron transport, cyt	86.26
2ppt_A	155	Thioredoxin-2; thiredoxin, zinc finger, oxidoreduc	86.21
2yv9_A	291	Chloride intracellular channel EXC-4; chloride ION	86.18
3cxg_A	133	Putative thioredoxin; malaria, structural GEN oxid	86.13
1x5d_A	133	Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC	86.01
1vf1_A	229	Glutathione S-transferase 3; detoxification; HET:	85.99
1nhy_A	219	EF-1-gamma 1, elongation factor 1-gamma 1; protein	85.96
4exj_A	238	Uncharacterized protein; transferase-like protein,	85.78
3lcz_A	53	YCZA, inhibitor of trap, regulated by T-box (Trp)	85.74
3fk8_A	133	Disulphide isomerase; APC61824.1, xylella fastidio	85.63
2x64_A	207	Glutathione-S-transferase; detoxification enzyme;	85.48
1z6m_A	175	Conserved hypothetical protein; structural genomic	85.34
2hnl_A	225	Glutathione S-transferase 1; prostaglandin synthas	85.32
3ul3_B	128	Thioredoxin, thioredoxin-2; PTEX, oxidoreductase;	84.85
1wou_A	123	Thioredoxin -related protein, 14 kDa; electron tra	84.54
2f9s_A	151	Thiol-disulfide oxidoreductase RESA; thioredoxin-l	84.35
2znm_A	195	Thiol:disulfide interchange protein DSBA; thioredo	84.27
1lu4_A	136	Soluble secreted antigen MPT53; thioredoxin-like f	84.2
4glt_A	225	Glutathione S-transferase-like protein; structural	84.1
3vk9_A	216	Glutathione S-transferase delta; glutathione bindi	83.99
4ags_A	471	Thiol-dependent reductase 1; transferase, leishman	83.83
2fhe_A	216	GST, glutathione S-transferase; transferase-substr	83.41
3dxb_A	222	Thioredoxin N-terminally fused to PUF60(UHM); spli	83.38
1x5e_A	126	Thioredoxin domain containing protein 1; TMX, TXND	83.15
3gx0_A	215	GST-like protein YFCG; transferase, glutathione, g	82.88
1qgv_A	142	Spliceosomal protein U5-15KD; snRNP, thioredoxin,	82.86
3fkf_A	148	Thiol-disulfide oxidoreductase; structural genomic	82.68
2ycd_A	230	Glutathione S-transferase; SOIL bacteria, herbicid	82.57
3iso_A	218	Putative glutathione transferase; GST; HET: GSH; 1	82.56
4hz4_A	217	Glutathione-S-transferase; enzyme function initiat	81.83
4ikh_A	244	Glutathione S-transferase; enzyme function initiat	81.7
2wb9_A	211	Glutathione transferase sigma class; thioredoxin f	81.52
2dj3_A	133	Protein disulfide-isomerase A4; protein ERP-72, ER	81.39
1tu7_A	208	Glutathione S-transferase 2; HET: GSH; 1.50A {Onch	81.06
2b5x_A	148	YKUV protein, TRXY; thioredoxin-like, oxidoreducta	80.81
1k3y_A	221	GSTA1-1, glutathione S-transferase A1; S-hexyl glu	80.62
2ywm_A	229	Glutaredoxin-like protein; redox protein, structur	80.61

>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}

Probab=99.86  E-value=5.1e-22  Score=171.60  Aligned_cols=101  Identities=22%  Similarity=0.398  Sum_probs=88.0

Q ss_pred             hhHHHhhhcCCCcEEEEEeCCCCCC-CCCCcHHH-HHHHHHhCCC-cEEEEECCCChhhHHHHHHHHcCCCCCCCCCceE
Q 045109          241 NGAVLDHKCGKEKLVVYFTSLRGIR-KTYEDCCH-VRVILKGLGV-RVDERDLSMHSGFKNELKELLGDGFSGGGLPRVF  317 (423)
Q Consensus       241 ~~~~v~~li~~~kVVIYtTSLrGIR-KT~c~Cc~-VK~LL~~~gV-~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVF  317 (423)
                      ....|+.+|.+++||||   ++|.. .++|+||. |+++|+.++| .|.++||..+.+.+++|.++.    +|+||||||
T Consensus         9 ~~e~i~~~i~~~~VvvF---~Kgt~~~P~C~fc~~ak~lL~~~gv~~~~~~~v~~~~~~r~~l~~~s----g~~TvPqIF   81 (118)
T 2wul_A            9 SAEQLDALVKKDKVVVF---LKGTPEQPQCGFSNAVVQILRLHGVRDYAAYNVLDDPELRQGIKDYS----NWPTIPQVY   81 (118)
T ss_dssp             CHHHHHHHHHHSSEEEE---ESBCSSSBSSHHHHHHHHHHHHTTCCSCEEEETTSCHHHHHHHHHHH----TCCSSCEEE
T ss_pred             hHHHHHHHHhcCCEEEE---EcCCCCCCCCHHHHHHHHHHHHhCCcCeEeecccCCHHHHHHHHHhc----cCCCCCeEe
Confidence            45678889999999999   34432 36899998 8999999999 599999999988888888876    478999999


Q ss_pred             eCCEEEcchHHHHHHHHcCchHHHHcccccc
Q 045109          318 VGKKYIGGAEEIRRMHEEGQLEKVVEGCEMI  348 (423)
Q Consensus       318 VdGe~IGGaDEV~~LhEsGeL~kLL~~~~~~  348 (423)
                      |||+||||+|+|++|+++|+|.++|+.++..
T Consensus        82 I~g~~IGG~Ddl~~l~~~GeL~~lL~~~Gi~  112 (118)
T 2wul_A           82 LNGEFVGGCDILLQMHQNGDLVEELKKLGIH  112 (118)
T ss_dssp             ETTEEEECHHHHHHHHHHTHHHHHHHHTTCC
T ss_pred             ECCEEECCHHHHHHHHHCCCHHHHHHHcCCc
Confidence            9999999999999999999999999987753

>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}

Probab=99.84  E-value=9.3e-21  Score=159.56  Aligned_cols=100  Identities=14%  Similarity=0.242  Sum_probs=87.7

Q ss_pred             hhHHHhhhcCCCcEEEEEeCCCCCCC-CCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe
Q 045109          241 NGAVLDHKCGKEKLVVYFTSLRGIRK-TYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV  318 (423)
Q Consensus       241 ~~~~v~~li~~~kVVIYtTSLrGIRK-T~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV  318 (423)
                      ....|+.++.+++||||+   +|+.. ++|++|. |+++|+.+||.|+++||+.+.+.+++|.++.|    +++||||||
T Consensus         5 ~~~~v~~~i~~~~Vvlf~---kg~~~~~~Cp~C~~ak~~L~~~gi~y~~~di~~d~~~~~~l~~~~g----~~tvP~ifi   77 (111)
T 3zyw_A            5 LNLRLKKLTHAAPCMLFM---KGTPQEPRCGFSKQMVEILHKHNIQFSSFDIFSDEEVRQGLKAYSS----WPTYPQLYV   77 (111)
T ss_dssp             HHHHHHHHHTSSSEEEEE---SBCSSSBSSHHHHHHHHHHHHTTCCCEEEEGGGCHHHHHHHHHHHT----CCSSCEEEE
T ss_pred             HHHHHHHHHhcCCEEEEE---ecCCCCCcchhHHHHHHHHHHcCCCeEEEECcCCHHHHHHHHHHHC----CCCCCEEEE
Confidence            456788899999999992   33333 7899998 99999999999999999999888888888764    679999999


Q ss_pred             CCEEEcchHHHHHHHHcCchHHHHccccc
Q 045109          319 GKKYIGGAEEIRRMHEEGQLEKVVEGCEM  347 (423)
Q Consensus       319 dGe~IGGaDEV~~LhEsGeL~kLL~~~~~  347 (423)
                      ||++|||+|++.+|+++|+|.++|+.++.
T Consensus        78 ~g~~iGG~d~l~~l~~~G~L~~~L~~a~~  106 (111)
T 3zyw_A           78 SGELIGGLDIIKELEASEELDTICPKAAE  106 (111)
T ss_dssp             TTEEEECHHHHHHHHHTTCHHHHSCCCCC
T ss_pred             CCEEEecHHHHHHHHHCCCHHHHHHhCcc
Confidence            99999999999999999999999987654

>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}

Probab=99.83  E-value=1.7e-20  Score=160.38  Aligned_cols=103  Identities=17%  Similarity=0.316  Sum_probs=87.7

Q ss_pred             hHHHhhhcCCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCc---EEEEECCCChhhHHHHHHHHcCCCCCCCCCceE
Q 045109          242 GAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVR---VDERDLSMHSGFKNELKELLGDGFSGGGLPRVF  317 (423)
Q Consensus       242 ~~~v~~li~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~---yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVF  317 (423)
                      ..+|+.+|..++||||+.+..  -.++|++|. |+++|+.+||.   |+++||+.+.+.+++|.++.|    ++||||||
T Consensus         6 ~~~v~~~i~~~~Vvvfsk~t~--~~p~Cp~C~~ak~lL~~~gv~~~~~~~~dv~~~~~~~~~l~~~sg----~~tvP~vf   79 (121)
T 3gx8_A            6 RKAIEDAIESAPVVLFMKGTP--EFPKCGFSRATIGLLGNQGVDPAKFAAYNVLEDPELREGIKEFSE----WPTIPQLY   79 (121)
T ss_dssp             HHHHHHHHHSCSEEEEESBCS--SSBCTTHHHHHHHHHHHHTBCGGGEEEEECTTCHHHHHHHHHHHT----CCSSCEEE
T ss_pred             HHHHHHHhccCCEEEEEeccC--CCCCCccHHHHHHHHHHcCCCcceEEEEEecCCHHHHHHHHHHhC----CCCCCeEE
Confidence            356778999999999932110  013899998 89999999999   999999988888888888764    67999999


Q ss_pred             eCCEEEcchHHHHHHHHcCchHHHHcccccccC
Q 045109          318 VGKKYIGGAEEIRRMHEEGQLEKVVEGCEMIDD  350 (423)
Q Consensus       318 VdGe~IGGaDEV~~LhEsGeL~kLL~~~~~~~~  350 (423)
                      |||++|||+|++++|+++|+|.++|+.++++.+
T Consensus        80 I~g~~iGG~d~l~~l~~~G~L~~~L~~~g~~~~  112 (121)
T 3gx8_A           80 VNKEFIGGCDVITSMARSGELADLLEEAQALVP  112 (121)
T ss_dssp             ETTEEEESHHHHHHHHHHTHHHHHHHHTTCBCC
T ss_pred             ECCEEEecHHHHHHHHHcCChHHHHHHcCCCCC
Confidence            999999999999999999999999999887643

>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A

Probab=99.82  E-value=2.3e-20  Score=155.79  Aligned_cols=99  Identities=22%  Similarity=0.383  Sum_probs=85.0

Q ss_pred             hHHHhhhcCCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCC
Q 045109          242 GAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGK  320 (423)
Q Consensus       242 ~~~v~~li~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdG  320 (423)
                      ..+|+.++..++||||+++..  ..++|++|. |+++|+.+||.|+++||+.+.+.+++|.++.+    +.+||||||||
T Consensus         8 ~~~v~~~i~~~~Vvvy~k~t~--~~p~Cp~C~~ak~~L~~~gi~~~~~dI~~~~~~~~~l~~~~g----~~tvP~ifi~g   81 (109)
T 3ipz_A            8 KDTLEKLVNSEKVVLFMKGTR--DFPMCGFSNTVVQILKNLNVPFEDVNILENEMLRQGLKEYSN----WPTFPQLYIGG   81 (109)
T ss_dssp             HHHHHHHHTSSSEEEEESBCS--SSBSSHHHHHHHHHHHHTTCCCEEEEGGGCHHHHHHHHHHHT----CSSSCEEEETT
T ss_pred             HHHHHHHHccCCEEEEEecCC--CCCCChhHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHHHC----CCCCCeEEECC
Confidence            456778999999999943211  113899998 99999999999999999988888888888764    57999999999


Q ss_pred             EEEcchHHHHHHHHcCchHHHHcccc
Q 045109          321 KYIGGAEEIRRMHEEGQLEKVVEGCE  346 (423)
Q Consensus       321 e~IGGaDEV~~LhEsGeL~kLL~~~~  346 (423)
                      ++|||++++++|+++|+|.++|+.+.
T Consensus        82 ~~iGG~d~l~~l~~~G~L~~~L~~a~  107 (109)
T 3ipz_A           82 EFFGGCDITLEAFKTGELQEEVEKAM  107 (109)
T ss_dssp             EEEECHHHHHHHHHHSHHHHHHHHHH
T ss_pred             EEEeCHHHHHHHHHcCcHHHHHHHhh
Confidence            99999999999999999999998754

>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A

Probab=99.82  E-value=1.3e-20  Score=163.78  Aligned_cols=94  Identities=15%  Similarity=0.178  Sum_probs=83.6

Q ss_pred             EEEEEeCCCCCCCCCCcHHHHHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCC----CCCCCCCceEeCCEEEcchHHH
Q 045109          254 LVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDG----FSGGGLPRVFVGKKYIGGAEEI  329 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~----tg~~TVPQVFVdGe~IGGaDEV  329 (423)
                      |+|||||+.|.++++..|.+||+||+++||.|+|+||+++.++++||+++.+..    .|.+++|||||||+||||+|++
T Consensus         2 V~vYtt~~c~~c~~kk~c~~aK~lL~~kgV~feEidI~~d~~~r~eM~~~~~~~~~~~~G~~tvPQIFi~~~~iGG~Dd~   81 (121)
T 1u6t_A            2 IRVYIASSSGSTAIKKKQQDVLGFLEANKIGFEEKDIAANEENRKWMRENVPENSRPATGYPLPPQIFNESQYRGDYDAF   81 (121)
T ss_dssp             EEEEECTTCSCHHHHHHHHHHHHHHHHTTCCEEEEECTTCHHHHHHHHHHSCGGGSCSSSSCCSCEEEETTEEEEEHHHH
T ss_pred             EEEEecCCCCCccchHHHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHhccccccccCCCcCCCEEEECCEEEechHHH
Confidence            899999988877777778889999999999999999999999999999998311    1457999999999999999999


Q ss_pred             HHHHHcCchHHHHccccc
Q 045109          330 RRMHEEGQLEKVVEGCEM  347 (423)
Q Consensus       330 ~~LhEsGeL~kLL~~~~~  347 (423)
                      .+|++.|+|.++|...+.
T Consensus        82 ~~l~e~g~L~~lL~~~~~   99 (121)
T 1u6t_A           82 FEARENNAVYAFLGLTAP   99 (121)
T ss_dssp             HHHHHTTCHHHHHTCCCC
T ss_pred             HHhhhhChHHHHHcCCCC
Confidence            999999999999976543

>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A

Probab=99.79  E-value=1.4e-19  Score=158.59  Aligned_cols=102  Identities=14%  Similarity=0.272  Sum_probs=90.3

Q ss_pred             hhHHHhhhcCCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeC
Q 045109          241 NGAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVG  319 (423)
Q Consensus       241 ~~~~v~~li~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVd  319 (423)
                      ....|+.++..++|+||++|+...  ++|++|. |+++|+.++|.|+++||+.+++.+++|+++.+    +++|||||||
T Consensus        24 ~~~~v~~~i~~~~Vvvy~ks~~~~--~~Cp~C~~ak~~L~~~gv~y~~vdI~~d~~~~~~L~~~~G----~~tvP~VfI~   97 (135)
T 2wci_A           24 TIEKIQRQIAENPILLYMKGSPKL--PSCGFSAQAVQALAACGERFAYVDILQNPDIRAELPKYAN----WPTFPQLWVD   97 (135)
T ss_dssp             HHHHHHHHHHHCSEEEEESBCSSS--BSSHHHHHHHHHHHTTCSCCEEEEGGGCHHHHHHHHHHHT----CCSSCEEEET
T ss_pred             HHHHHHHHhccCCEEEEEEecCCC--CCCccHHHHHHHHHHcCCceEEEECCCCHHHHHHHHHHHC----CCCcCEEEEC
Confidence            455677788899999998877662  6899887 89999999999999999988888888888774    5799999999


Q ss_pred             CEEEcchHHHHHHHHcCchHHHHcccccc
Q 045109          320 KKYIGGAEEIRRMHEEGQLEKVVEGCEMI  348 (423)
Q Consensus       320 Ge~IGGaDEV~~LhEsGeL~kLL~~~~~~  348 (423)
                      |++|||+|++.+|+++|+|.++|+.+++.
T Consensus        98 G~~iGG~d~l~~l~~~G~L~~~L~~~g~~  126 (135)
T 2wci_A           98 GELVGGCDIVIEMYQRGELQQLIKETAAK  126 (135)
T ss_dssp             TEEEESHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CEEEEChHHHHHHHHCChHHHHHHHcCCC
Confidence            99999999999999999999999887654

>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}

Probab=99.79  E-value=1.4e-19  Score=156.92  Aligned_cols=98  Identities=18%  Similarity=0.255  Sum_probs=79.7

Q ss_pred             hHHHhhhcCCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhC---CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceE
Q 045109          242 GAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGL---GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVF  317 (423)
Q Consensus       242 ~~~v~~li~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~---gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVF  317 (423)
                      ..-+++++..++||||       ++++||+|. ||++|+..   ++.|+++||+.+. ...++++.+...+|++||||||
T Consensus         4 ~~~~~~ii~~~~Vvvy-------sk~~Cp~C~~ak~lL~~~~~~~v~~~~idid~~~-d~~~~~~~l~~~~G~~tVP~If   75 (127)
T 3l4n_A            4 QKEYSLILDLSPIIIF-------SKSTCSYSKGMKELLENEYQFIPNYYIIELDKHG-HGEELQEYIKLVTGRGTVPNLL   75 (127)
T ss_dssp             HHHHHHHHTSCSEEEE-------ECTTCHHHHHHHHHHHHHEEEESCCEEEEGGGST-THHHHHHHHHHHHSCCSSCEEE
T ss_pred             HHHHHHHHccCCEEEE-------EcCCCccHHHHHHHHHHhcccCCCcEEEEecCCC-CHHHHHHHHHHHcCCCCcceEE
Confidence            3446678899999999       678999998 89999984   7999999998653 2233444443334578999999


Q ss_pred             eCCEEEcchHHHHHHHHcCchHHHHccccc
Q 045109          318 VGKKYIGGAEEIRRMHEEGQLEKVVEGCEM  347 (423)
Q Consensus       318 VdGe~IGGaDEV~~LhEsGeL~kLL~~~~~  347 (423)
                      |||++|||+|++.+|+++|+|.++|+.++.
T Consensus        76 I~G~~IGG~ddl~~l~~~G~L~~lL~~~g~  105 (127)
T 3l4n_A           76 VNGVSRGGNEEIKKLHTQGKLLESLQVWSD  105 (127)
T ss_dssp             ETTEECCCHHHHHHHHHTTCHHHHHHHTCT
T ss_pred             ECCEEEcCHHHHHHHHHCCCHHHHHHHhcC
Confidence            999999999999999999999999988664

>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*

Probab=99.77  E-value=4.2e-19  Score=146.51  Aligned_cols=100  Identities=24%  Similarity=0.388  Sum_probs=80.1

Q ss_pred             hhHHHhhhcCCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeC
Q 045109          241 NGAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVG  319 (423)
Q Consensus       241 ~~~~v~~li~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVd  319 (423)
                      ...+++.++..++|+||       .+++|++|. ++.+|+.++|.|+++||+.+.....++++.+...+++.+||+||||
T Consensus         8 ~~~~~~~~i~~~~v~vy-------~~~~Cp~C~~~~~~L~~~~i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~ifi~   80 (113)
T 3rhb_A            8 MEESIRKTVTENTVVIY-------SKTWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLERLTGQHTVPNVFVC   80 (113)
T ss_dssp             HHHHHHHHHHHSSEEEE-------ECTTCHHHHHHHHHHHHTTCCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCEEEET
T ss_pred             HHHHHHHHHhcCCEEEE-------ECCCChhHHHHHHHHHHcCCCCeEEEeecCCCChHHHHHHHHHHhCCCCcCEEEEC
Confidence            35567778888999999       568999998 8999999999999999986522333444444333456799999999


Q ss_pred             CEEEcchHHHHHHHHcCchHHHHccccc
Q 045109          320 KKYIGGAEEIRRMHEEGQLEKVVEGCEM  347 (423)
Q Consensus       320 Ge~IGGaDEV~~LhEsGeL~kLL~~~~~  347 (423)
                      |++|||++++.+|+++|+|.++|+.++.
T Consensus        81 g~~igG~~~~~~~~~~g~L~~~l~~~~~  108 (113)
T 3rhb_A           81 GKHIGGCTDTVKLNRKGDLELMLAEANG  108 (113)
T ss_dssp             TEEEESHHHHHHHHHHTHHHHHHTC---
T ss_pred             CEEEcCcHHHHHHHHcCCHHHHHHHHhh
Confidence            9999999999999999999999998764

>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0

Probab=99.77  E-value=5.1e-19  Score=147.88  Aligned_cols=92  Identities=22%  Similarity=0.402  Sum_probs=77.8

Q ss_pred             hHHHhhhcCCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCCh---hhHHHHHHHHcCCCCCCCCCceE
Q 045109          242 GAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHS---GFKNELKELLGDGFSGGGLPRVF  317 (423)
Q Consensus       242 ~~~v~~li~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~---~~reEL~~lLg~~tg~~TVPQVF  317 (423)
                      ...+++++..++|+||       .+++||+|. |+.+|+.+||.|+++||+.+.   +.+++|.+..    |+++||+||
T Consensus         7 ~~~~~~~i~~~~v~vy-------~~~~Cp~C~~ak~~L~~~~i~~~~~dvd~~~~~~~~~~~l~~~~----g~~tvP~vf   75 (114)
T 3h8q_A            7 RRHLVGLIERSRVVIF-------SKSYCPHSTRVKELFSSLGVECNVLELDQVDDGARVQEVLSEIT----NQKTVPNIF   75 (114)
T ss_dssp             HHHHHHHHHHCSEEEE-------ECTTCHHHHHHHHHHHHTTCCCEEEETTTSTTHHHHHHHHHHHH----SCCSSCEEE
T ss_pred             HHHHHHHhccCCEEEE-------EcCCCCcHHHHHHHHHHcCCCcEEEEecCCCChHHHHHHHHHHh----CCCccCEEE
Confidence            4556778889999999       568999988 899999999999999998643   2234454444    568999999


Q ss_pred             eCCEEEcchHHHHHHHHcCchHHHHcc
Q 045109          318 VGKKYIGGAEEIRRMHEEGQLEKVVEG  344 (423)
Q Consensus       318 VdGe~IGGaDEV~~LhEsGeL~kLL~~  344 (423)
                      |||++|||++++.+|+++|+|.++|+.
T Consensus        76 i~g~~igG~d~l~~l~~~G~L~~~l~~  102 (114)
T 3h8q_A           76 VNKVHVGGCDQTFQAYQSGLLQKLLQE  102 (114)
T ss_dssp             ETTEEEESHHHHHHHHHHTHHHHHHHS
T ss_pred             ECCEEEeCHHHHHHHHHCCCHHHHhcC
Confidence            999999999999999999999999984

>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.76  E-value=1.8e-18  Score=144.98  Aligned_cols=89  Identities=13%  Similarity=0.146  Sum_probs=78.1

Q ss_pred             CcEEEEEeCCCCCCCCCCcHHH-------HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcC----CCCCCCCCceEeCC
Q 045109          252 EKLVVYFTSLRGIRKTYEDCCH-------VRVILKGLGVRVDERDLSMHSGFKNELKELLGD----GFSGGGLPRVFVGK  320 (423)
Q Consensus       252 ~kVVIYtTSLrGIRKT~c~Cc~-------VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~----~tg~~TVPQVFVdG  320 (423)
                      -+|+||       .+++|++|.       |+++|+.++|.|+++||+.+.+.+++|+++++.    .+++++||||||||
T Consensus         8 m~V~vy-------~~~~C~~C~~~~~~~~ak~~L~~~gi~y~~vdI~~~~~~~~~l~~~~~~~~~~~~g~~tvP~vfi~g   80 (111)
T 2ct6_A            8 MVIRVF-------IASSSGFVAIKKKQQDVVRFLEANKIEFEEVDITMSEEQRQWMYKNVPPEKKPTQGNPLPPQIFNGD   80 (111)
T ss_dssp             CCEEEE-------ECSSCSCHHHHHHHHHHHHHHHHTTCCEEEEETTTCHHHHHHHHHSCCTTTCCSSSSCCSCEEEETT
T ss_pred             cEEEEE-------EcCCCCCcccchhHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHhcccccccCCCCCCCEEEECC
Confidence            479999       456899877       899999999999999999999889999888632    13678999999999


Q ss_pred             EEEcchHHHHHHHHcCchHHHHccccc
Q 045109          321 KYIGGAEEIRRMHEEGQLEKVVEGCEM  347 (423)
Q Consensus       321 e~IGGaDEV~~LhEsGeL~kLL~~~~~  347 (423)
                      ++|||++++.+|+++|+|.++|+..+.
T Consensus        81 ~~iGG~d~l~~l~~~g~L~~~L~~~~~  107 (111)
T 2ct6_A           81 RYCGDYDSFFESKESNTVFSFLGLKSG  107 (111)
T ss_dssp             EEEEEHHHHHHHHTTTCHHHHHTCCSS
T ss_pred             EEEeCHHHHHHHHHcCCHHHHHcCCCC
Confidence            999999999999999999999987553

>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1

Probab=99.76  E-value=2.2e-18  Score=142.69  Aligned_cols=97  Identities=16%  Similarity=0.329  Sum_probs=84.4

Q ss_pred             HHhhhcCCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEE
Q 045109          244 VLDHKCGKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKY  322 (423)
Q Consensus       244 ~v~~li~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~  322 (423)
                      .++.++..++|+||+++...  .++|++|. ++++|+.++|.|+++||+.+.+.+++|.++.+    +.+||+|||||++
T Consensus         7 ~~~~~i~~~~vvvy~~g~~~--~~~Cp~C~~ak~~L~~~~i~~~~vdi~~~~~~~~~l~~~~g----~~~vP~ifi~g~~   80 (109)
T 1wik_A            7 GLKVLTNKASVMLFMKGNKQ--EAKCGFSKQILEILNSTGVEYETFDILEDEEVRQGLKTFSN----WPTYPQLYVRGDL   80 (109)
T ss_dssp             CHHHHHTTSSEEEEESSTTT--CCCSSTHHHHHHHHHHTCSCEEEEESSSCHHHHHHHHHHHS----CCSSCEEECSSSE
T ss_pred             HHHHHhccCCEEEEEecCCC--CCCCchHHHHHHHHHHcCCCeEEEECCCCHHHHHHHHHHhC----CCCCCEEEECCEE
Confidence            35567889999999665442  37899887 89999999999999999998888888888775    5799999999999


Q ss_pred             EcchHHHHHHHHcCchHHHHcccc
Q 045109          323 IGGAEEIRRMHEEGQLEKVVEGCE  346 (423)
Q Consensus       323 IGGaDEV~~LhEsGeL~kLL~~~~  346 (423)
                      |||++++.+|+++|+|.++|+.+.
T Consensus        81 igG~d~l~~l~~~g~L~~~L~~a~  104 (109)
T 1wik_A           81 VGGLDIVKELKDNGELLPILKGES  104 (109)
T ss_dssp             EECHHHHHHHHHHTCSHHHHHTCC
T ss_pred             EcCHHHHHHHHHCCCHHHHHhccc
Confidence            999999999999999999998644

>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A

Probab=99.75  E-value=3.3e-18  Score=137.75  Aligned_cols=83  Identities=23%  Similarity=0.394  Sum_probs=73.8

Q ss_pred             CcEEEEEeCCCCCCCCCCcHH-------HHHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEc
Q 045109          252 EKLVVYFTSLRGIRKTYEDCC-------HVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIG  324 (423)
Q Consensus       252 ~kVVIYtTSLrGIRKT~c~Cc-------~VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IG  324 (423)
                      .+|+||+       +++|++|       +|+++|+.+||.|+++||+.+.+.+++|+++.|.  +..+||||||||++||
T Consensus         2 ~~v~ly~-------~~~C~~c~~~~~~~~ak~~L~~~~i~~~~~di~~~~~~~~~l~~~~g~--~~~~vP~ifi~g~~ig   72 (93)
T 1t1v_A            2 SGLRVYS-------TSVTGSREIKSQQSEVTRILDGKRIQYQLVDISQDNALRDEMRTLAGN--PKATPPQIVNGNHYCG   72 (93)
T ss_dssp             CCEEEEE-------CSSCSCHHHHHHHHHHHHHHHHTTCCCEEEETTSCHHHHHHHHHHTTC--TTCCSCEEEETTEEEE
T ss_pred             CCEEEEE-------cCCCCCchhhHHHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHHhCC--CCCCCCEEEECCEEEe
Confidence            4799994       5678877       4999999999999999999998889999888752  1469999999999999


Q ss_pred             chHHHHHHHHcCchHHHHc
Q 045109          325 GAEEIRRMHEEGQLEKVVE  343 (423)
Q Consensus       325 GaDEV~~LhEsGeL~kLL~  343 (423)
                      |++++.+|+++|+|.++|+
T Consensus        73 G~d~l~~l~~~g~L~~~l~   91 (93)
T 1t1v_A           73 DYELFVEAVEQDTLQEFLK   91 (93)
T ss_dssp             EHHHHHHHHHTTCHHHHTT
T ss_pred             CHHHHHHHHhcCCHHHHhC
Confidence            9999999999999999996

>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}

Probab=99.74  E-value=7.1e-18  Score=138.27  Aligned_cols=97  Identities=18%  Similarity=0.336  Sum_probs=84.2

Q ss_pred             hHHHhhhcCCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCC
Q 045109          242 GAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGK  320 (423)
Q Consensus       242 ~~~v~~li~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdG  320 (423)
                      ...++.++..++|+||+++..+  .++|++|. ++.+|+.++|.|.++||+.+++.+++|.++.+    ..++|+|||||
T Consensus         7 ~~~~~~~i~~~~vvvf~~g~~~--~~~C~~C~~~~~~L~~~~i~~~~vdi~~~~~~~~~l~~~~g----~~~vP~v~i~g   80 (105)
T 2yan_A            7 EERLKVLTNKASVMLFMKGNKQ--EAKCGFSKQILEILNSTGVEYETFDILEDEEVRQGLKAYSN----WPTYPQLYVKG   80 (105)
T ss_dssp             HHHHHHHHTSSSEEEEESBCSS--SBCTTHHHHHHHHHHHHTCCCEEEEGGGCHHHHHHHHHHHT----CCSSCEEEETT
T ss_pred             HHHHHHHhccCCEEEEEecCCC--CCCCccHHHHHHHHHHCCCCeEEEECCCCHHHHHHHHHHHC----CCCCCeEEECC
Confidence            3456678888999999765443  47999887 89999999999999999988888888888765    56999999999


Q ss_pred             EEEcchHHHHHHHHcCchHHHHcc
Q 045109          321 KYIGGAEEIRRMHEEGQLEKVVEG  344 (423)
Q Consensus       321 e~IGGaDEV~~LhEsGeL~kLL~~  344 (423)
                      ++|||++++.+|+++|+|.++|+.
T Consensus        81 ~~igg~d~~~~l~~~g~L~~~l~~  104 (105)
T 2yan_A           81 ELVGGLDIVKELKENGELLPILRG  104 (105)
T ss_dssp             EEEECHHHHHHHHHTTCHHHHHTT
T ss_pred             EEEeChHHHHHHHHCCCHHHHhcc
Confidence            999999999999999999999973

>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0

Probab=99.72  E-value=2e-17  Score=136.22  Aligned_cols=84  Identities=20%  Similarity=0.396  Sum_probs=76.4

Q ss_pred             CCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHH
Q 045109          250 GKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEE  328 (423)
Q Consensus       250 ~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDE  328 (423)
                      ..++|+||       .+++|++|. |+.+|+.++|.|+++||+.+.+.+++|.++.+   +..+||+|||||++|||+++
T Consensus        14 ~~~~v~vy-------~~~~Cp~C~~ak~~L~~~~i~y~~idI~~~~~~~~~l~~~~~---g~~~vP~ifi~g~~igG~d~   83 (99)
T 3qmx_A           14 VSAKIEIY-------TWSTCPFCMRALALLKRKGVEFQEYCIDGDNEAREAMAARAN---GKRSLPQIFIDDQHIGGCDD   83 (99)
T ss_dssp             CCCCEEEE-------ECTTCHHHHHHHHHHHHHTCCCEEEECTTCHHHHHHHHHHTT---TCCCSCEEEETTEEEESHHH
T ss_pred             CCCCEEEE-------EcCCChhHHHHHHHHHHCCCCCEEEEcCCCHHHHHHHHHHhC---CCCCCCEEEECCEEEeChHH
Confidence            47899999       678999998 89999999999999999999888888887751   45799999999999999999


Q ss_pred             HHHHHHcCchHHHHc
Q 045109          329 IRRMHEEGQLEKVVE  343 (423)
Q Consensus       329 V~~LhEsGeL~kLL~  343 (423)
                      +.+|+++|+|.++|+
T Consensus        84 l~~~~~~g~L~~~L~   98 (99)
T 3qmx_A           84 IYALDGAGKLDPLLH   98 (99)
T ss_dssp             HHHHHHTTCHHHHHT
T ss_pred             HHHHHHcCCHHHHhc
Confidence            999999999999986

>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*

Probab=99.68  E-value=7.6e-17  Score=138.73  Aligned_cols=93  Identities=23%  Similarity=0.449  Sum_probs=79.5

Q ss_pred             hHHHhhhcCCCcEEEEEeCCCCCCCCCCcHHH-H-HHHHHhCC---CcEEEEECCCCh---hhHHHHHHHHcCCCCCCCC
Q 045109          242 GAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCH-V-RVILKGLG---VRVDERDLSMHS---GFKNELKELLGDGFSGGGL  313 (423)
Q Consensus       242 ~~~v~~li~~~kVVIYtTSLrGIRKT~c~Cc~-V-K~LL~~~g---V~yeErDVsmd~---~~reEL~~lLg~~tg~~TV  313 (423)
                      ...|+.++..++|+||       .+++|++|. + +.+|+.++   +.|+++||+.+.   +.+++|.++.+    +.+|
T Consensus        27 ~~~v~~~i~~~~Vvvy-------~~~~Cp~C~~a~k~~L~~~~~~~i~~~~vdvd~~~~~~~~~~~L~~~~g----~~tV   95 (129)
T 3ctg_A           27 VAHVKDLIGQKEVFVA-------AKTYCPYCKATLSTLFQELNVPKSKALVLELDEMSNGSEIQDALEEISG----QKTV   95 (129)
T ss_dssp             HHHHHHHHHHSSEEEE-------ECTTCHHHHHHHHHHHTTSCCCGGGEEEEEGGGSTTHHHHHHHHHHHHS----CCSS
T ss_pred             HHHHHHHHcCCCEEEE-------ECCCCCchHHHHHHHHHhcCccCCCcEEEEccccCCHHHHHHHHHHHhC----CCCC
Confidence            3456667778899999       578999887 9 99999999   999999998764   34567777664    5799


Q ss_pred             CceEeCCEEEcchHHHHHHHHcCchHHHHccc
Q 045109          314 PRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGC  345 (423)
Q Consensus       314 PQVFVdGe~IGGaDEV~~LhEsGeL~kLL~~~  345 (423)
                      |+|||+|++|||++++.+|+++|+|.++|+.+
T Consensus        96 P~vfi~g~~igG~d~l~~l~~~G~L~~~L~~a  127 (129)
T 3ctg_A           96 PNVYINGKHIGGNSDLETLKKNGKLAEILKPV  127 (129)
T ss_dssp             CEEEETTEEEESHHHHHHHHHTTHHHHHTTTT
T ss_pred             CEEEECCEEEcCHHHHHHHHHCCCHHHHHHHH
Confidence            99999999999999999999999999999753

>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*

Probab=99.67  E-value=1.2e-16  Score=134.75  Aligned_cols=95  Identities=23%  Similarity=0.416  Sum_probs=81.0

Q ss_pred             hHHHhhhcCCCcEEEEEeCCCCCCCCCCcHHH-H-HHHHHhCC---CcEEEEECCCCh---hhHHHHHHHHcCCCCCCCC
Q 045109          242 GAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCH-V-RVILKGLG---VRVDERDLSMHS---GFKNELKELLGDGFSGGGL  313 (423)
Q Consensus       242 ~~~v~~li~~~kVVIYtTSLrGIRKT~c~Cc~-V-K~LL~~~g---V~yeErDVsmd~---~~reEL~~lLg~~tg~~TV  313 (423)
                      ...+++++..++|+||       .+++|++|. + +.+|+.++   |.|.++||+.+.   +.+++|.++.+    ..+|
T Consensus        15 ~~~~~~~i~~~~Vvvf-------~~~~Cp~C~~alk~~L~~~~~~~i~~~~vdid~~~~~~~~~~~l~~~~g----~~tv   83 (118)
T 3c1r_A           15 IKHVKDLIAENEIFVA-------SKTYCPYCHAALNTLFEKLKVPRSKVLVLQLNDMKEGADIQAALYEING----QRTV   83 (118)
T ss_dssp             HHHHHHHHHHSSEEEE-------ECSSCHHHHHHHHHHHTTSCCCGGGEEEEEGGGSTTHHHHHHHHHHHHS----CCSS
T ss_pred             HHHHHHHHccCcEEEE-------EcCCCcCHHHHHHHHHHHcCCCCCCeEEEECccCCChHHHHHHHHHHhC----CCCc
Confidence            3456667778899999       568999887 8 99999999   999999998764   35667777664    5699


Q ss_pred             CceEeCCEEEcchHHHHHHHHcCchHHHHccccc
Q 045109          314 PRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEM  347 (423)
Q Consensus       314 PQVFVdGe~IGGaDEV~~LhEsGeL~kLL~~~~~  347 (423)
                      |+|||+|++|||++++.+|+++|+|+++|+.+++
T Consensus        84 P~vfi~g~~igG~d~l~~l~~~g~L~~~L~~~g~  117 (118)
T 3c1r_A           84 PNIYINGKHIGGNDDLQELRETGELEELLEPILA  117 (118)
T ss_dssp             CEEEETTEEEESHHHHHHHHHHTHHHHHHHHHHC
T ss_pred             CEEEECCEEEEcHHHHHHHHHCCcHHHHHHHcCC
Confidence            9999999999999999999999999999987654

>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*

Probab=99.63  E-value=1.5e-15  Score=122.35  Aligned_cols=95  Identities=27%  Similarity=0.523  Sum_probs=81.5

Q ss_pred             HHHhhhcCCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCc---EEEEECCCC---hhhHHHHHHHHcCCCCCCCCCc
Q 045109          243 AVLDHKCGKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVR---VDERDLSMH---SGFKNELKELLGDGFSGGGLPR  315 (423)
Q Consensus       243 ~~v~~li~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~---yeErDVsmd---~~~reEL~~lLg~~tg~~TVPQ  315 (423)
                      ..+++++..++|++|       .+++|++|. ++.+|+.+++.   |..+||+.+   .+.+++|.+..+    ..++|+
T Consensus         3 ~~~~~~i~~~~v~~f-------~~~~C~~C~~~~~~L~~~~~~~~~~~~vdi~~~~~~~~~~~~l~~~~g----~~~vP~   71 (105)
T 1kte_A            3 AFVNSKIQPGKVVVF-------IKPTCPFCRKTQELLSQLPFKEGLLEFVDITATSDTNEIQDYLQQLTG----ARTVPR   71 (105)
T ss_dssp             HHHHHHCCTTCEEEE-------ECSSCHHHHHHHHHHHHSCBCTTSEEEEEGGGSTTHHHHHHHHHHHHS----CCCSCE
T ss_pred             hHHHhhcccCCEEEE-------EcCCCHhHHHHHHHHHHcCCCCCccEEEEccCCCCHHHHHHHHHHHhC----CCCcCe
Confidence            346678889999999       568999887 89999999999   999999876   355567777664    568999


Q ss_pred             eEeCCEEEcchHHHHHHHHcCchHHHHcccccc
Q 045109          316 VFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEMI  348 (423)
Q Consensus       316 VFVdGe~IGGaDEV~~LhEsGeL~kLL~~~~~~  348 (423)
                      |||+|++|||++++.+|++.|+|.++|+.++++
T Consensus        72 i~~~g~~i~g~~~~~~~~~~g~L~~~l~~~g~~  104 (105)
T 1kte_A           72 VFIGKECIGGCTDLESMHKRGELLTRLQQVGAV  104 (105)
T ss_dssp             EEETTEEEESHHHHHHHHHHTHHHHHHHHHTCB
T ss_pred             EEECCEEEeccHHHHHHHHCCcHHHHHHHcCCC
Confidence            999999999999999999999999999987653

>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}

Probab=99.60  E-value=5.9e-16  Score=155.81  Aligned_cols=96  Identities=20%  Similarity=0.315  Sum_probs=78.8

Q ss_pred             hHHHhhhcCCCcEEEEEeCCCCCCCCCCcHHH-HHH-HHHhCCCcEEEEEC------CCChhhHHHHHHHHcCCCCCCCC
Q 045109          242 GAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCH-VRV-ILKGLGVRVDERDL------SMHSGFKNELKELLGDGFSGGGL  313 (423)
Q Consensus       242 ~~~v~~li~~~kVVIYtTSLrGIRKT~c~Cc~-VK~-LL~~~gV~yeErDV------smd~~~reEL~~lLg~~tg~~TV  313 (423)
                      ...|++++..++|+||       .+++|++|. |++ +|+.++|.|+++||      +.+.+.+++|+++.    +++||
T Consensus       251 ~~~V~~lI~~~~VvVY-------sk~~CPyC~~Ak~~LL~~~gV~y~eidVlEld~~~~~~e~~~~L~~~t----G~~TV  319 (362)
T 2jad_A          251 IKHVKDLIAENEIFVA-------SKTYCPYSHAALNTLFEKLKVPRSKVLVLQLNDMKEGADIQAALYEIN----GQRTV  319 (362)
T ss_dssp             HHHHHHHHHTCSEEEE-------ECTTCHHHHHHHHHHHTTTCCCTTTEEEEEGGGSTTHHHHHHHHHHHH----CCCSS
T ss_pred             HHHHHHHhccCCEEEE-------EcCCCcchHHHHHHHHHHcCCCcceEEEEEeccccCCHHHHHHHHHHH----CCCCc
Confidence            3467778899999999       678999998 776 89999999876665      33455566666655    47899


Q ss_pred             CceEeCCEEEcchHHHHHHHHcCchHHHHcccccc
Q 045109          314 PRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEMI  348 (423)
Q Consensus       314 PQVFVdGe~IGGaDEV~~LhEsGeL~kLL~~~~~~  348 (423)
                      |||||||++|||+|+|++|+++|+|.++|+.++++
T Consensus       320 PqVFI~Gk~IGG~DdL~~L~~~GeL~~lL~~~~~~  354 (362)
T 2jad_A          320 PNIYINGKHIGGNDDLQELRETGELEELLEPILAN  354 (362)
T ss_dssp             CEEEETTEEEESHHHHHHHHHSSHHHHHHHHHC--
T ss_pred             CEEEECCEEEEChHHHHHhhhCChHHHHHHhCchh
Confidence            99999999999999999999999999999887654

>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B

Probab=99.59  E-value=6.7e-15  Score=122.18  Aligned_cols=96  Identities=18%  Similarity=0.420  Sum_probs=83.3

Q ss_pred             hHHHhhhcCCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCc---EEEEECCCCh---hhHHHHHHHHcCCCCCCCCC
Q 045109          242 GAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVR---VDERDLSMHS---GFKNELKELLGDGFSGGGLP  314 (423)
Q Consensus       242 ~~~v~~li~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~---yeErDVsmd~---~~reEL~~lLg~~tg~~TVP  314 (423)
                      ...++.++..++|++|       .+++|++|. ++.+|+.+++.   |.++||+.+.   +.+++|.++.+    ..++|
T Consensus         9 ~~~~~~~i~~~~vv~f-------~~~~Cp~C~~~~~~L~~~~~~~~~~~~vdi~~~~~~~~~~~~l~~~~g----~~~vP   77 (114)
T 2hze_A            9 EEFVQQRLANNKVTIF-------VKYTCPFCRNALDILNKFSFKRGAYEIVDIKEFKPENELRDYFEQITG----GKTVP   77 (114)
T ss_dssp             HHHHHTTCCTTCEEEE-------ECTTCHHHHHHHHHHTTSCBCTTSEEEEEGGGSSSHHHHHHHHHHHHS----CCSSC
T ss_pred             HHHHHHHhccCCEEEE-------EeCCChhHHHHHHHHHHcCCCcCceEEEEccCCCChHHHHHHHHHHhC----CCCcC
Confidence            3456678899999999       567999887 89999999999   9999998775   55667777765    56999


Q ss_pred             ceEeCCEEEcchHHHHHHHHcCchHHHHcccccc
Q 045109          315 RVFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEMI  348 (423)
Q Consensus       315 QVFVdGe~IGGaDEV~~LhEsGeL~kLL~~~~~~  348 (423)
                      +|||||++|||++++..|++.|+|.++|+..+++
T Consensus        78 ~v~i~g~~igg~~~~~~~~~~~~L~~~L~~~g~~  111 (114)
T 2hze_A           78 RIFFGKTSIGGYSDLLEIDNMDALGDILSSIGVL  111 (114)
T ss_dssp             EEEETTEEEESHHHHHHHHHTTCHHHHHHHTTCB
T ss_pred             EEEECCEEEeCcHHHHHHHHCChHHHHHHHcCCe
Confidence            9999999999999999999999999999987654

>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A

Probab=99.56  E-value=1.2e-14  Score=115.10  Aligned_cols=78  Identities=21%  Similarity=0.235  Sum_probs=63.8

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECC-----CChhhHHHHHHHHcCCCC-CCCCCceEe-CCEEEc
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLS-----MHSGFKNELKELLGDGFS-GGGLPRVFV-GKKYIG  324 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVs-----md~~~reEL~~lLg~~tg-~~TVPQVFV-dGe~IG  324 (423)
                      +|+||++++..   .+|++|. |+++|+.+||.|+++||+     .+++.+++|.++.+.... ..+|||||| ||++||
T Consensus         1 ~v~iY~~~~~~---~~Cp~C~~ak~~L~~~gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v~i~~g~~ig   77 (87)
T 1aba_A            1 MFKVYGYDSNI---HKCGPCDNAKRLLTVKKQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVFAPDGSHIG   77 (87)
T ss_dssp             CEEEEECCTTT---SCCHHHHHHHHHHHHTTCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEECTTSCEEE
T ss_pred             CEEEEEeCCCC---CcCccHHHHHHHHHHcCCCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEEEEECCEEEe
Confidence            58999554322   2899887 999999999999999998     778888899988763210 028999999 999999


Q ss_pred             chHHHHHHH
Q 045109          325 GAEEIRRMH  333 (423)
Q Consensus       325 GaDEV~~Lh  333 (423)
                      |++++.+|+
T Consensus        78 G~d~l~~~~   86 (87)
T 1aba_A           78 GFDQLREYF   86 (87)
T ss_dssp             SHHHHHHHT
T ss_pred             CHHHHHHhc
Confidence            999999886

>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.54  E-value=1.6e-14  Score=123.36  Aligned_cols=96  Identities=25%  Similarity=0.534  Sum_probs=81.4

Q ss_pred             hHHHhhhcCCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCC---hhhHHHHHHHHcCCCCCCCCCceE
Q 045109          242 GAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMH---SGFKNELKELLGDGFSGGGLPRVF  317 (423)
Q Consensus       242 ~~~v~~li~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd---~~~reEL~~lLg~~tg~~TVPQVF  317 (423)
                      ...++.++..++|+||       .+++|++|. ++.+|+.+++.|.++||+.+   .+.+++|.++.+    ..++|+||
T Consensus        17 ~~~~~~~i~~~~vvvf-------~~~~Cp~C~~~~~~L~~~~i~~~~vdid~~~~~~~~~~~l~~~~g----~~~vP~l~   85 (130)
T 2cq9_A           17 VNQIQETISDNCVVIF-------SKTSCSYCTMAKKLFHDMNVNYKVVELDLLEYGNQFQDALYKMTG----ERTVPRIF   85 (130)
T ss_dssp             HHHHHHHHHHSSEEEE-------ECSSCSHHHHHHHHHHHHTCCCEEEETTTSTTHHHHHHHHHHHHS----SCCSSEEE
T ss_pred             HHHHHHHHcCCcEEEE-------EcCCChHHHHHHHHHHHcCCCcEEEECcCCcCcHHHHHHHHHHhC----CCCcCEEE
Confidence            3445556667789999       568999887 89999999999999999877   555667777765    56899999


Q ss_pred             eCCEEEcchHHHHHHHHcCchHHHHcccccc
Q 045109          318 VGKKYIGGAEEIRRMHEEGQLEKVVEGCEMI  348 (423)
Q Consensus       318 VdGe~IGGaDEV~~LhEsGeL~kLL~~~~~~  348 (423)
                      |+|++|||++++.++++.|+|.++|+.++..
T Consensus        86 i~G~~igg~~~l~~~~~~~~L~~~L~~~g~~  116 (130)
T 2cq9_A           86 VNGTFIGGATDTHRLHKEGKLLPLVHQCYLK  116 (130)
T ss_dssp             ETTEEEEEHHHHHHHHHHTSSHHHHHHHSSS
T ss_pred             ECCEEEcChHHHHHHHHcCcHHHHHHHcCcH
Confidence            9999999999999999999999999987754

>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*

Probab=99.54  E-value=3.2e-14  Score=108.93  Aligned_cols=80  Identities=21%  Similarity=0.488  Sum_probs=71.6

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRR  331 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~  331 (423)
                      +|++|       ..++|++|. ++.+|+.++|.|+++|++.+...++++.+..+    ..++|+||+||++|||++++.+
T Consensus         2 ~i~~y-------~~~~C~~C~~~~~~l~~~~i~~~~~~i~~~~~~~~~~~~~~~----~~~vP~l~~~g~~i~g~~~i~~   70 (82)
T 1fov_A            2 NVEIY-------TKETCPYCHRAKALLSSKGVSFQELPIDGNAAKREEMIKRSG----RTTVPQIFIDAQHIGGYDDLYA   70 (82)
T ss_dssp             CEEEE-------ECSSCHHHHHHHHHHHHHTCCCEEEECTTCSHHHHHHHHHHS----SCCSCEEEETTEEEESHHHHHH
T ss_pred             cEEEE-------ECCCChhHHHHHHHHHHCCCCcEEEECCCCHHHHHHHHHHhC----CCCcCEEEECCEEEeCHHHHHH
Confidence            68899       557899887 89999999999999999987777788887775    4689999999999999999999


Q ss_pred             HHHcCchHHHHc
Q 045109          332 MHEEGQLEKVVE  343 (423)
Q Consensus       332 LhEsGeL~kLL~  343 (423)
                      ++++|+|+++|+
T Consensus        71 ~~~~g~l~~~l~   82 (82)
T 1fov_A           71 LDARGGLDPLLK   82 (82)
T ss_dssp             HHHTTCSHHHHC
T ss_pred             HHHCCCHHHHhC
Confidence            999999999984

>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}

Probab=99.53  E-value=5.1e-14  Score=111.05  Aligned_cols=84  Identities=21%  Similarity=0.530  Sum_probs=74.6

Q ss_pred             CcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHH
Q 045109          252 EKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIR  330 (423)
Q Consensus       252 ~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~  330 (423)
                      .+|++|       ..++|+.|+ ++.+|+.++|.|+++||+.+...+++|.++.+    ..++|+||+||++|||++++.
T Consensus         6 ~~v~ly-------~~~~C~~C~~~~~~L~~~~i~~~~~di~~~~~~~~~l~~~~~----~~~vP~l~~~g~~i~g~~~i~   74 (92)
T 2khp_A            6 VDVIIY-------TRPGCPYCARAKALLARKGAEFNEIDASATPELRAEMQERSG----RNTFPQIFIGSVHVGGCDDLY   74 (92)
T ss_dssp             CCEEEE-------ECTTCHHHHHHHHHHHHTTCCCEEEESTTSHHHHHHHHHHHT----SSCCCEEEETTEEEESHHHHH
T ss_pred             ccEEEE-------ECCCChhHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHHhC----CCCcCEEEECCEEEcCHHHHH
Confidence            579999       567899887 89999999999999999887777888888775    458999999999999999999


Q ss_pred             HHHHcCchHHHHccccc
Q 045109          331 RMHEEGQLEKVVEGCEM  347 (423)
Q Consensus       331 ~LhEsGeL~kLL~~~~~  347 (423)
                      +++++|+|+++|+ .++
T Consensus        75 ~~~~~~~l~~~l~-~g~   90 (92)
T 2khp_A           75 ALEDEGKLDSLLK-TGK   90 (92)
T ss_dssp             HHHTTTCHHHHHH-HSS
T ss_pred             HHHHcCCHHHHHh-ccC
Confidence            9999999999998 454

>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*

Probab=99.52  E-value=2.8e-14  Score=125.45  Aligned_cols=95  Identities=25%  Similarity=0.547  Sum_probs=80.7

Q ss_pred             hHHHhhhcCCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCC---hhhHHHHHHHHcCCCCCCCCCceE
Q 045109          242 GAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMH---SGFKNELKELLGDGFSGGGLPRVF  317 (423)
Q Consensus       242 ~~~v~~li~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd---~~~reEL~~lLg~~tg~~TVPQVF  317 (423)
                      ...++.++..++|+||       .+++|++|. ++.+|+.+++.|.++||+.+   .+.+++|.++.+    ..++|+||
T Consensus        39 ~~~~~~~i~~~~Vvvf-------~~~~Cp~C~~~k~~L~~~~i~~~~vdId~~~~~~~~~~~L~~~~g----~~tvP~if  107 (146)
T 2ht9_A           39 VNQIQETISDNCVVIF-------SKTSCSYCTMAKKLFHDMNVNYKVVELDLLEYGNQFQDALYKMTG----ERTVPRIF  107 (146)
T ss_dssp             HHHHHHHHHHCSEEEE-------ECTTCHHHHHHHHHHHHHTCCCEEEEGGGCTTHHHHHHHHHHHHS----CCCSCEEE
T ss_pred             HHHHHHHhcCCCEEEE-------ECCCChhHHHHHHHHHHcCCCeEEEECccCcCCHHHHHHHHHHhC----CCCcCeEE
Confidence            3445566677899999       568999887 89999999999999999876   455566777664    56899999


Q ss_pred             eCCEEEcchHHHHHHHHcCchHHHHccccc
Q 045109          318 VGKKYIGGAEEIRRMHEEGQLEKVVEGCEM  347 (423)
Q Consensus       318 VdGe~IGGaDEV~~LhEsGeL~kLL~~~~~  347 (423)
                      |||++|||++++..|++.|+|.++|+.++.
T Consensus       108 i~G~~igG~d~l~~l~~~g~L~~~L~~~g~  137 (146)
T 2ht9_A          108 VNGTFIGGATDTHRLHKEGKLLPLVHQCYL  137 (146)
T ss_dssp             ETTEEEESHHHHHHHHHTTCHHHHHHHTTC
T ss_pred             ECCEEEeCchHHHHHHHcChHHHHHHHcCc
Confidence            999999999999999999999999998764

>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}

Probab=99.51  E-value=4.4e-14  Score=111.31  Aligned_cols=81  Identities=21%  Similarity=0.581  Sum_probs=71.7

Q ss_pred             CcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHH-cCCCCCCCCCceEeCCEEEcchHHH
Q 045109          252 EKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELL-GDGFSGGGLPRVFVGKKYIGGAEEI  329 (423)
Q Consensus       252 ~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lL-g~~tg~~TVPQVFVdGe~IGGaDEV  329 (423)
                      .+|++|       .+++|++|. ++.+|+.+++.|+++||+  .+..++|.++. +    ..++|+||+||++|||++++
T Consensus         6 ~~v~~y-------~~~~C~~C~~~~~~L~~~~i~~~~vdv~--~~~~~~l~~~~~~----~~~vP~l~~~g~~i~g~~~i   72 (89)
T 2klx_A            6 KEIILY-------TRPNCPYCKRARDLLDKKGVKYTDIDAS--TSLRQEMVQRANG----RNTFPQIFIGDYHVGGCDDL   72 (89)
T ss_dssp             CCEEEE-------SCSCCTTTHHHHHHHHHHTCCEEEECSC--HHHHHHHHHHHHS----SCCSCEEEETTEECCSHHHH
T ss_pred             ceEEEE-------ECCCChhHHHHHHHHHHcCCCcEEEECC--HHHHHHHHHHhCC----CCCcCEEEECCEEEeChHHH
Confidence            579999       668999887 899999999999999997  56677887776 4    46899999999999999999


Q ss_pred             HHHHHcCchHHHHccc
Q 045109          330 RRMHEEGQLEKVVEGC  345 (423)
Q Consensus       330 ~~LhEsGeL~kLL~~~  345 (423)
                      .+|+++|+|.++|+.+
T Consensus        73 ~~~~~~g~l~~~l~~~   88 (89)
T 2klx_A           73 YALENKGKLDSLLQDV   88 (89)
T ss_dssp             HHHHHHTTHHHHHHHH
T ss_pred             HHHHHcCcHHHHHhhc
Confidence            9999999999999864

>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}

Probab=99.39  E-value=6.2e-13  Score=109.37  Aligned_cols=67  Identities=15%  Similarity=0.274  Sum_probs=58.3

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe-CCEEEcchH
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV-GKKYIGGAE  327 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV-dGe~IGGaD  327 (423)
                      ..+|+||       ++++||+|. +|++|+.+||.|+++||+.+++.++++.++.+   |.+||||||| ||..++|.+
T Consensus         3 ta~I~vY-------s~~~Cp~C~~aK~~L~~~gi~y~~idi~~d~~~~~~~~~~~~---G~~tVP~I~i~Dg~~l~~~~   71 (92)
T 2lqo_A            3 TAALTIY-------TTSWCGYCLRLKTALTANRIAYDEVDIEHNRAAAEFVGSVNG---GNRTVPTVKFADGSTLTNPS   71 (92)
T ss_dssp             SSCEEEE-------ECTTCSSHHHHHHHHHHTTCCCEEEETTTCHHHHHHHHHHSS---SSSCSCEEEETTSCEEESCC
T ss_pred             CCcEEEE-------cCCCCHhHHHHHHHHHhcCCceEEEEcCCCHHHHHHHHHHcC---CCCEeCEEEEeCCEEEeCCC
Confidence            4679999       678999998 89999999999999999999998888888753   4679999999 688888854

>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*

Probab=99.36  E-value=1.2e-12  Score=101.26  Aligned_cols=76  Identities=17%  Similarity=0.284  Sum_probs=59.7

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChh--hHHHHHHHHcCC-CCCCCCCceEeCCEEEcchHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSG--FKNELKELLGDG-FSGGGLPRVFVGKKYIGGAEE  328 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~--~reEL~~lLg~~-tg~~TVPQVFVdGe~IGGaDE  328 (423)
                      +|+||       .+++|++|. ++.+|+.+++.|++++|+.+..  .+++|.++.+.. .+..++|+|||||++|||+++
T Consensus         5 ~v~ly-------~~~~Cp~C~~~~~~L~~~~i~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i~g~~i~g~~~   77 (89)
T 3msz_A            5 KVKIY-------TRNGCPYCVWAKQWFEENNIAFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFIDDEHIGGFTE   77 (89)
T ss_dssp             CEEEE-------ECTTCHHHHHHHHHHHHTTCCCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEETTEEEESHHH
T ss_pred             EEEEE-------EcCCChhHHHHHHHHHHcCCCceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEECCEEEeChHH
Confidence            58999       567899888 8999999999999998876544  345565554320 112799999999999999999


Q ss_pred             HHHHHHc
Q 045109          329 IRRMHEE  335 (423)
Q Consensus       329 V~~LhEs  335 (423)
                      +.+++++
T Consensus        78 i~~~~~~   84 (89)
T 3msz_A           78 LKANADK   84 (89)
T ss_dssp             HHHTHHH
T ss_pred             HHHHHHH
Confidence            9998753

>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*

Probab=99.26  E-value=7.6e-12  Score=129.24  Aligned_cols=91  Identities=19%  Similarity=0.343  Sum_probs=78.3

Q ss_pred             HHHhhhcCCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCC---hhhHHHHHHHHcCCCCCCCCCceEe
Q 045109          243 AVLDHKCGKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMH---SGFKNELKELLGDGFSGGGLPRVFV  318 (423)
Q Consensus       243 ~~v~~li~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd---~~~reEL~~lLg~~tg~~TVPQVFV  318 (423)
                      ..|++++..++|+||       .+++||+|. +|++|+.+++.|+++||+.+   .+++++|+++.    ++.+||+|||
T Consensus         9 ~~v~~~i~~~~v~vy-------~~~~Cp~C~~~k~~L~~~~i~~~~~dv~~~~~~~~~~~~l~~~~----g~~tvP~v~i   77 (598)
T 2x8g_A            9 QWLRKTVDSAAVILF-------SKTTCPYCKKVKDVLAEAKIKHATIELDQLSNGSAIQKCLASFS----KIETVPQMFV   77 (598)
T ss_dssp             HHHHHHHHHCSEEEE-------ECTTCHHHHHHHHHHHHTTCCCEEEEGGGSTTHHHHHHHTHHHH----SCCCSCEEEE
T ss_pred             HHHHHHhccCCEEEE-------ECCCChhHHHHHHHHHHCCCCcEEEEcccCcchHHHHHHHHHHh----CCceeCEEEE
Confidence            457778888999999       667999988 99999999999999999865   44455665554    4679999999


Q ss_pred             CCEEEcchHHHHHHHHcCchHHHHcc
Q 045109          319 GKKYIGGAEEIRRMHEEGQLEKVVEG  344 (423)
Q Consensus       319 dGe~IGGaDEV~~LhEsGeL~kLL~~  344 (423)
                      +|++|||++++.++++.|+|+++|..
T Consensus        78 ~g~~igG~~~l~~~~~~g~L~~~l~~  103 (598)
T 2x8g_A           78 RGKFIGDSQTVLKYYSNDELAGIVNE  103 (598)
T ss_dssp             TTEEEECHHHHHHHHHTTCHHHHHHC
T ss_pred             CCEEEEeeehhhhhhhcCcchhhccc
Confidence            99999999999999999999999964

>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}

Probab=99.19  E-value=1.5e-11  Score=100.16  Aligned_cols=72  Identities=21%  Similarity=0.259  Sum_probs=60.1

Q ss_pred             CCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCC-ChhhHHHHHHHHcCCCCCCCCCceEeCC-EEEcch
Q 045109          250 GKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSM-HSGFKNELKELLGDGFSGGGLPRVFVGK-KYIGGA  326 (423)
Q Consensus       250 ~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsm-d~~~reEL~~lLg~~tg~~TVPQVFVdG-e~IGGa  326 (423)
                      ..++|+||       .+++|++|. ++.+|+.+++.|+++||+. +.+.+.++.+.+...++..+||+|||+| ++|||+
T Consensus        20 ~~~~v~ly-------~~~~Cp~C~~ak~~L~~~~i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i~~~~~igg~   92 (103)
T 3nzn_A           20 DRGKVIMY-------GLSTCVWCKKTKKLLTDLGVDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTIINDEKAIVGF   92 (103)
T ss_dssp             CCSCEEEE-------ECSSCHHHHHHHHHHHHHTBCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEETTTEEEESC
T ss_pred             CCCeEEEE-------cCCCCchHHHHHHHHHHcCCCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEECCCEEEEcC
Confidence            56889999       567999888 8999999999999999986 3555667766554445678999999999 999999


Q ss_pred             HH
Q 045109          327 EE  328 (423)
Q Consensus       327 DE  328 (423)
                      ++
T Consensus        93 ~~   94 (103)
T 3nzn_A           93 KE   94 (103)
T ss_dssp             CH
T ss_pred             CH
Confidence            86

>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A

Probab=99.15  E-value=3.3e-11  Score=92.65  Aligned_cols=75  Identities=17%  Similarity=0.310  Sum_probs=61.3

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHh-----CCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcch
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKG-----LGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGA  326 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~-----~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGa  326 (423)
                      +|++|       .+++|+.|. ++.+|+.     .++.|.++|++.+...+++|.++.+.  +..++|+|||+|++|||+
T Consensus         2 ~v~~f-------~~~~C~~C~~~~~~l~~l~~~~~~i~~~~vdi~~~~~~~~~l~~~~~~--~~~~vP~i~~~g~~i~~~   72 (85)
T 1ego_A            2 QTVIF-------GRSGCPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGITKEDLQQKAGK--PVETVPQIFVDQQHIGGY   72 (85)
T ss_dssp             EEEEE-------CCTTSTHHHHHHHHHHHHHHHHSSCEEEEECHHHHTCCSHHHHHHTCC--CSCCSCEEEETTEEEESS
T ss_pred             EEEEE-------eCCCCCCHHHHHHHHHHHHhcCCCceEEEEecccChHHHHHHHHHhCC--CCceeCeEEECCEEEECH
Confidence            58899       667999887 8999988     78999999996554445678777652  246899999999999999


Q ss_pred             HHHHHHHHcC
Q 045109          327 EEIRRMHEEG  336 (423)
Q Consensus       327 DEV~~LhEsG  336 (423)
                      +++.++.++|
T Consensus        73 ~~l~~~~~~~   82 (85)
T 1ego_A           73 TDFAAWVKEN   82 (85)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            9999988765

>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A

Probab=99.13  E-value=1.5e-10  Score=93.88  Aligned_cols=96  Identities=25%  Similarity=0.457  Sum_probs=77.9

Q ss_pred             hHHHhhhcCCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChh---hHHHHHHHHcCCCCCCCCCceE
Q 045109          242 GAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSG---FKNELKELLGDGFSGGGLPRVF  317 (423)
Q Consensus       242 ~~~v~~li~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~---~reEL~~lLg~~tg~~TVPQVF  317 (423)
                      ..+++.++..++|+||       ..++|+.|. ++.+|+.+++.|..++|+.+..   .+.+|.+.++    ..++|++|
T Consensus        10 ~~~~~~~~~~~~vv~f-------~a~~C~~C~~~~~~l~~~~~~~~~v~v~~~~~~~~~~~~l~~~~~----v~~~Pt~~   78 (116)
T 2e7p_A           10 LKKAKELASSAPVVVF-------SKTYCGYCNRVKQLLTQVGASYKVVELDELSDGSQLQSALAHWTG----RGTVPNVF   78 (116)
T ss_dssp             HHHHHHHHTSSSEEEE-------ECTTCHHHHHHHHHHHHHTCCCEEEEGGGSTTHHHHHHHHHHHHS----CCSSCEEE
T ss_pred             HHHHHHHHcCCCEEEE-------ECCCChhHHHHHHHHHHcCCCeEEEEccCCCChHHHHHHHHHHhC----CCCcCEEE
Confidence            3455567777889998       568999887 8999999999999999976654   2345655554    46899999


Q ss_pred             eCCEEEcchHHHHHHHHcCchHHHHcccccc
Q 045109          318 VGKKYIGGAEEIRRMHEEGQLEKVVEGCEMI  348 (423)
Q Consensus       318 VdGe~IGGaDEV~~LhEsGeL~kLL~~~~~~  348 (423)
                      ++|+.|||++.+..++..++|.++|+.++++
T Consensus        79 ~~g~~v~~~~~~~~~~~~~~l~~~l~~~g~~  109 (116)
T 2e7p_A           79 IGGKQIGGCDTVVEKHQRNELLPLLQDAAAT  109 (116)
T ss_dssp             ETTEEEECHHHHHHHHHTTCHHHHHHHTTC-
T ss_pred             ECCEEECChHHHHHHHhCChHHHHHHHcccc
Confidence            9999999999999999999999999987764

>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10

Probab=99.10  E-value=1.3e-10  Score=106.72  Aligned_cols=74  Identities=22%  Similarity=0.441  Sum_probs=62.7

Q ss_pred             hcCCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcch
Q 045109          248 KCGKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGA  326 (423)
Q Consensus       248 li~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGa  326 (423)
                      .+...+|+||       .+++|++|. ++.+|+.++|.|+++||+.+.. +++|.++.+    ..+||+|||+|++|||+
T Consensus       166 ~i~~~~i~ly-------~~~~Cp~C~~a~~~L~~~~i~~~~~~i~~~~~-~~~l~~~~g----~~~vP~~~~~g~~i~g~  233 (241)
T 1nm3_A          166 HQVQESISIF-------TKPGCPFCAKAKQLLHDKGLSFEEIILGHDAT-IVSVRAVSG----RTTVPQVFIGGKHIGGS  233 (241)
T ss_dssp             SCCCCCEEEE-------ECSSCHHHHHHHHHHHHHTCCCEEEETTTTCC-HHHHHHHTC----CSSSCEEEETTEEEESH
T ss_pred             ccccceEEEE-------ECCCChHHHHHHHHHHHcCCceEEEECCCchH-HHHHHHHhC----CCCcCEEEECCEEEECH
Confidence            4567889999       567899998 8999999999999999987643 577877654    56999999999999999


Q ss_pred             HHHHHHH
Q 045109          327 EEIRRMH  333 (423)
Q Consensus       327 DEV~~Lh  333 (423)
                      +++.++.
T Consensus       234 ~~i~~~l  240 (241)
T 1nm3_A          234 DDLEKYF  240 (241)
T ss_dssp             HHHHHC-
T ss_pred             HHHHHHh
Confidence            9998754

>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}

Probab=98.98  E-value=4.2e-10  Score=88.51  Aligned_cols=66  Identities=20%  Similarity=0.282  Sum_probs=52.5

Q ss_pred             CcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCC-ChhhH----HHHHHHHcCCCCCCCCCceEeCCEEEcc
Q 045109          252 EKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSM-HSGFK----NELKELLGDGFSGGGLPRVFVGKKYIGG  325 (423)
Q Consensus       252 ~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsm-d~~~r----eEL~~lLg~~tg~~TVPQVFVdGe~IGG  325 (423)
                      .+|+||       ..++|++|. ++.+|+.+++.|+++||+. +.+..    .+|.+..+    ..++|+||++|++|||
T Consensus        12 ~~v~ly-------~~~~Cp~C~~~~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~l~~~~g----~~~vP~l~~~g~~i~G   80 (92)
T 3ic4_A           12 AEVLMY-------GLSTCPHCKRTLEFLKREGVDFEVIWIDKLEGEERKKVIEKVHSISG----SYSVPVVVKGDKHVLG   80 (92)
T ss_dssp             SSSEEE-------ECTTCHHHHHHHHHHHHHTCCCEEEEGGGCCHHHHHHHHHHHHHHHS----SSCSCEEEETTEEEES
T ss_pred             ceEEEE-------ECCCChHHHHHHHHHHHcCCCcEEEEeeeCCccchHHHHHHHHHhcC----CCCcCEEEECCEEEeC
Confidence            468999       567899887 8999999999999999974 22233    55555544    4699999999999999


Q ss_pred             hHH
Q 045109          326 AEE  328 (423)
Q Consensus       326 aDE  328 (423)
                      ++.
T Consensus        81 ~~~   83 (92)
T 3ic4_A           81 YNE   83 (92)
T ss_dssp             CCH
T ss_pred             CCH
Confidence            864

>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1

Probab=98.84  E-value=3.7e-09  Score=80.83  Aligned_cols=64  Identities=16%  Similarity=0.260  Sum_probs=52.9

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEE  328 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDE  328 (423)
                      +|++|       ..++|+.|. ++.+|+.++|.|.++|++.+.+..+++++ +    +..++|++|++|+.|||++.
T Consensus         2 ~v~~f-------~~~~C~~C~~~~~~l~~~~i~~~~vdi~~~~~~~~~~~~-~----g~~~vP~~~~~g~~~~g~~~   66 (81)
T 1h75_A            2 RITIY-------TRNDCVQCHATKRAMENRGFDFEMINVDRVPEAAEALRA-Q----GFRQLPVVIAGDLSWSGFRP   66 (81)
T ss_dssp             CEEEE-------ECTTCHHHHHHHHHHHHTTCCCEEEETTTCHHHHHHHHH-T----TCCSSCEEEETTEEEESCCH
T ss_pred             EEEEE-------cCCCChhHHHHHHHHHHCCCCeEEEECCCCHHHHHHHHH-h----CCCccCEEEECCEEEecCCH
Confidence            58899       567899887 89999999999999999877666655543 2    45689999999999999873

>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1

Probab=98.71  E-value=2.1e-08  Score=74.95  Aligned_cols=64  Identities=19%  Similarity=0.224  Sum_probs=52.4

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEE  328 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDE  328 (423)
                      +|++|       ..++|+.|. ++.+|+.++|.|+.+|++.+....++++. .    +..++|++++||+.+||++.
T Consensus         2 ~i~~y-------~~~~C~~C~~~~~~l~~~~i~~~~~di~~~~~~~~~~~~-~----~~~~vP~l~~~g~~~~g~~~   66 (75)
T 1r7h_A            2 SITLY-------TKPACVQCTATKKALDRAGLAYNTVDISLDDEARDYVMA-L----GYVQAPVVEVDGEHWSGFRP   66 (75)
T ss_dssp             CEEEE-------ECTTCHHHHHHHHHHHHTTCCCEEEETTTCHHHHHHHHH-T----TCBCCCEEEETTEEEESCCH
T ss_pred             eEEEE-------eCCCChHHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHH-c----CCCccCEEEECCeEEcCCCH
Confidence            47899       567898887 89999999999999999877665666632 2    35689999999999999864

>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}

Probab=98.53  E-value=4.6e-08  Score=75.43  Aligned_cols=70  Identities=11%  Similarity=0.097  Sum_probs=52.7

Q ss_pred             CcEEEEEeCCCCCCCCCCcHHH-HHH----HHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCE--EEc
Q 045109          252 EKLVVYFTSLRGIRKTYEDCCH-VRV----ILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKK--YIG  324 (423)
Q Consensus       252 ~kVVIYtTSLrGIRKT~c~Cc~-VK~----LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe--~IG  324 (423)
                      .+|+||       .+++|+.|. ++.    +++.+++.|..++|+.+.+.. ++.+.++    ..++|+|||||+  ++|
T Consensus         2 ~~~~~f-------~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~g----v~~vPt~~i~g~~~~~G   69 (80)
T 2k8s_A            2 ASKAIF-------YHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTDKARI-AEAEKAG----VKSVPALVIDGAAFHIN   69 (80)
T ss_dssp             CEEEEE-------EECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTCSSTH-HHHHHHT----CCEEEEEEETTEEEEEE
T ss_pred             cceEEE-------eCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCChhhH-HHHHHcC----CCcCCEEEECCEEEEec
Confidence            468899       567999887 677    777788999999998653344 3444444    468999999999  899


Q ss_pred             chHHHHHHH
Q 045109          325 GAEEIRRMH  333 (423)
Q Consensus       325 GaDEV~~Lh  333 (423)
                      +..+..+|.
T Consensus        70 ~~~~~~~l~   78 (80)
T 2k8s_A           70 FGAGIDDLK   78 (80)
T ss_dssp             EEEEHHHHC
T ss_pred             cCcCHHHhh
Confidence            877666654

>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1

Probab=98.35  E-value=3.5e-07  Score=74.49  Aligned_cols=73  Identities=15%  Similarity=0.199  Sum_probs=54.7

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HHHHHH--hCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEE--Ecc
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VRVILK--GLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKY--IGG  325 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~--~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~--IGG  325 (423)
                      ...|++|       .+++|+.|. ++.+|+  ..+|.|.++||+ +.+. .+|.+.++     .++|+||++|+.  +||
T Consensus        16 ~~~v~~f-------~~~~C~~C~~~~~~L~~l~~~i~~~~vdi~-~~~~-~el~~~~g-----~~vP~l~~~g~~~~~~g   81 (100)
T 1wjk_A           16 LPVLTLF-------TKAPCPLCDEAKEVLQPYKDRFILQEVDIT-LPEN-STWYERYK-----FDIPVFHLNGQFLMMHR   81 (100)
T ss_dssp             CCEEEEE-------ECSSCHHHHHHHHHTSTTSSSSEEEEEETT-SSTT-HHHHHHSS-----SSCSEEEESSSEEEESS
T ss_pred             CCEEEEE-------eCCCCcchHHHHHHHHHhhhCCeEEEEECC-Ccch-HHHHHHHC-----CCCCEEEECCEEEEecC
Confidence            4467788       567999887 899999  678999999997 3333 56666554     589999999998  888


Q ss_pred             hHHHHHHHHcCchHHHHcc
Q 045109          326 AEEIRRMHEEGQLEKVVEG  344 (423)
Q Consensus       326 aDEV~~LhEsGeL~kLL~~  344 (423)
                      ++.-       +|.++|+.
T Consensus        82 ~~~~-------~l~~~l~~   93 (100)
T 1wjk_A           82 VNTS-------KLEKQLRK   93 (100)
T ss_dssp             CCHH-------HHHHHHHS
T ss_pred             CCHH-------HHHHHHHH
Confidence            7642       46666654

>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A

Probab=98.16  E-value=4.1e-06  Score=67.58  Aligned_cols=58  Identities=12%  Similarity=0.075  Sum_probs=46.8

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCc-EEEEECCCChhhHHHHHHHHcCCCCCCCCCceE-eCCEEEcch
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVR-VDERDLSMHSGFKNELKELLGDGFSGGGLPRVF-VGKKYIGGA  326 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~-yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVF-VdGe~IGGa  326 (423)
                      +|++|       .+++|+.|. ++.+|+..++. |.++||+.++    +|.+.++    . ++|+|+ +||+.++|.
T Consensus         2 ~vv~f-------~a~~C~~C~~~~~~L~~~~~~~~~~vdid~~~----~l~~~~g----~-~vPtl~~~~G~~v~g~   62 (87)
T 1ttz_A            2 ALTLY-------QRDDCHLCDQAVEALAQARAGAFFSVFIDDDA----ALESAYG----L-RVPVLRDPMGRELDWP   62 (87)
T ss_dssp             CEEEE-------ECSSCHHHHHHHHHHHHTTCCCEEEEECTTCH----HHHHHHT----T-TCSEEECTTCCEEESC
T ss_pred             EEEEE-------ECCCCchHHHHHHHHHHHHHhheEEEECCCCH----HHHHHhC----C-CcCeEEEECCEEEeCC
Confidence            58999       678999887 89999999997 8999998665    3555554    2 399999 899999654

>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19

Probab=97.90  E-value=4e-06  Score=81.60  Aligned_cols=66  Identities=14%  Similarity=0.191  Sum_probs=44.5

Q ss_pred             CcEEEEEeCCCCCCCCCCcHHH-HHHHHHhC----CC---cEEEEECC----CChhhH-------HHHHHHHcCCCCCCC
Q 045109          252 EKLVVYFTSLRGIRKTYEDCCH-VRVILKGL----GV---RVDERDLS----MHSGFK-------NELKELLGDGFSGGG  312 (423)
Q Consensus       252 ~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~----gV---~yeErDVs----md~~~r-------eEL~~lLg~~tg~~T  312 (423)
                      ..|.||       .+.+|++|. ++++|+.+    +|   .|++.+++    .|+..+       +++.+..    |.++
T Consensus        44 ~~Vely-------Ts~gCp~C~~Ak~lL~~~~~~~~vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~----G~~t  112 (270)
T 2axo_A           44 GVVELF-------TSQGCASCPPADEALRKMIQKGDVVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRAL----GRNG  112 (270)
T ss_dssp             CEEEEE-------ECTTCTTCHHHHHHHHHHHHHTSSEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHT----TCSC
T ss_pred             cEEEEE-------eCCCCCChHHHHHHHHHhhccCCeeeEEEEEEEecccccccchhhhhhhHHHHHHHHHh----CCCc
Confidence            468899       457899997 89999988    77   45522222    222222       2233333    4568


Q ss_pred             C--CceEeCCE-EEcchHH
Q 045109          313 L--PRVFVGKK-YIGGAEE  328 (423)
Q Consensus       313 V--PQVFVdGe-~IGGaDE  328 (423)
                      |  |||||||+ ++||++.
T Consensus       113 VyTPqI~Ing~~~v~G~d~  131 (270)
T 2axo_A          113 VYTPQAILNGRDHVKGADV  131 (270)
T ss_dssp             CCSSEEEETTTEEEETTCH
T ss_pred             ccCCEEEECCEEeecCCCH
Confidence            9  99999999 8999985

>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}

Probab=97.88  E-value=1.3e-05  Score=67.59  Aligned_cols=56  Identities=20%  Similarity=0.259  Sum_probs=45.0

Q ss_pred             CcEEEEEeCCCCCCCCCCcHHH-HHHHHHh----CCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCce--EeCCEEE
Q 045109          252 EKLVVYFTSLRGIRKTYEDCCH-VRVILKG----LGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRV--FVGKKYI  323 (423)
Q Consensus       252 ~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~----~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQV--FVdGe~I  323 (423)
                      -.|++|       .+++|+.|. ++.+|+.    ++|.|.++||+.+++    +.+.++    . ++|+|  |+||+.+
T Consensus        30 ~~vv~y-------~~~~C~~C~~a~~~L~~l~~e~~i~~~~vDId~d~~----l~~~yg----v-~VP~l~~~~dG~~v   92 (107)
T 2fgx_A           30 RKLVVY-------GREGCHLCEEMIASLRVLQKKSWFELEVINIDGNEH----LTRLYN----D-RVPVLFAVNEDKEL   92 (107)
T ss_dssp             CCEEEE-------ECSSCHHHHHHHHHHHHHHHHSCCCCEEEETTTCHH----HHHHST----T-SCSEEEETTTTEEE
T ss_pred             cEEEEE-------eCCCChhHHHHHHHHHHHHHhcCCeEEEEECCCCHH----HHHHhC----C-CCceEEEEECCEEE
Confidence            468999       568999888 7999988    899999999986653    444443    2 49999  9999988

>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A

Probab=97.69  E-value=6.7e-05  Score=64.34  Aligned_cols=46  Identities=20%  Similarity=0.301  Sum_probs=40.8

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHc
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLG  305 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg  305 (423)
                      .|+||       .++.|+.|. ++.+|+.+||.|+++|+..++..+++|++++.
T Consensus         2 mi~lY-------~~~~C~~C~ka~~~L~~~gi~y~~~di~~~~~~~~el~~~l~   48 (132)
T 1z3e_A            2 MVTLY-------TSPSCTSCRKARAWLEEHEIPFVERNIFSEPLSIDEIKQILR   48 (132)
T ss_dssp             CEEEE-------ECTTCHHHHHHHHHHHHTTCCEEEEETTTSCCCHHHHHHHHH
T ss_pred             eEEEE-------eCCCChHHHHHHHHHHHcCCceEEEEccCCCccHHHHHHHHH
Confidence            48899       567899888 89999999999999999988888899998875

>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12

Probab=97.49  E-value=4.9e-05  Score=63.65  Aligned_cols=44  Identities=20%  Similarity=0.150  Sum_probs=34.3

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKEL  303 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~l  303 (423)
                      .|+||       .++.|+.|+ ++++|+.+||.|+++|+..++..+++|++.
T Consensus         1 ~i~iY-------~~~~C~~C~kak~~L~~~gi~~~~~di~~~~~~~~~l~~~   45 (114)
T 1rw1_A            1 TYVLY-------GIKACDTMKKARTWLDEHKVAYDFHDYKAVGIDREHLRRW   45 (114)
T ss_dssp             CEEEE-------ECSSCHHHHHHHHHHHHTTCCEEEEEHHHHCCCHHHHHHH
T ss_pred             CEEEE-------ECCCChHHHHHHHHHHHCCCceEEEeecCCCCCHHHHHHH
Confidence            37899       567899888 899999999999999997555334454443

>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}

Probab=97.41  E-value=9.2e-05  Score=62.51  Aligned_cols=45  Identities=18%  Similarity=0.227  Sum_probs=35.7

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELL  304 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lL  304 (423)
                      .|+||       ..+.|+.|+ ++++|+.+||.|+++|+..++..+++|++++
T Consensus         6 ~i~iY-------~~~~C~~C~ka~~~L~~~gi~y~~~di~~~~~~~~~l~~~~   51 (120)
T 2kok_A            6 SVTIY-------GIKNCDTMKKARIWLEDHGIDYTFHDYKKEGLDAETLDRFL   51 (120)
T ss_dssp             CEEEE-------ECSSCHHHHHHHHHHHHHTCCEEEEEHHHHCCCHHHHHHHH
T ss_pred             EEEEE-------ECCCChHHHHHHHHHHHcCCcEEEEeeeCCCCCHHHHHHHH
Confidence            58999       567899887 9999999999999999965554455665554

>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12

Probab=97.02  E-value=0.00085  Score=56.83  Aligned_cols=45  Identities=18%  Similarity=0.302  Sum_probs=40.9

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHc
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLG  305 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg  305 (423)
                      |+||       ..+.|+.|. ++++|+.+||.|+++|+..++..+++|+++++
T Consensus         2 i~iY-------~~~~C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~el~~~l~   47 (120)
T 3l78_A            2 VTLF-------LSPSCTSCRKARAWLNRHDVVFQEHNIMTSPLSRDELLKILS   47 (120)
T ss_dssp             EEEE-------ECSSCHHHHHHHHHHHHTTCCEEEEETTTSCCCHHHHHHHHH
T ss_pred             EEEE-------eCCCCHHHHHHHHHHHHcCCCeEEEecccCCCcHHHHHHHHh
Confidence            7899       567899887 99999999999999999988888999999886

>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}

Probab=96.74  E-value=0.0013  Score=56.06  Aligned_cols=47  Identities=15%  Similarity=0.159  Sum_probs=42.2

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcC
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGD  306 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~  306 (423)
                      .|+||       ..+.|+.|+ ++++|+.+||.|+++|+..++..+++|.++++.
T Consensus         6 ~i~iY-------~~p~C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~eL~~~l~~   53 (121)
T 3rdw_A            6 DVTIY-------HNPRCSKSRETLALVEQQGITPQVVLYLETPPSVDKLKELLQQ   53 (121)
T ss_dssp             CCEEE-------CCTTCHHHHHHHHHHHTTTCCCEEECTTTSCCCHHHHHHHHHH
T ss_pred             cEEEE-------ECCCCHHHHHHHHHHHHcCCCcEEEeeccCCCcHHHHHHHHHh
Confidence            48899       667899887 999999999999999999888889999998864

>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0

Probab=96.73  E-value=0.0015  Score=55.62  Aligned_cols=46  Identities=15%  Similarity=0.143  Sum_probs=41.0

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHc
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLG  305 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg  305 (423)
                      .|+||       ..+.|+.|+ ++++|+.+||.|+++|+..++..++||.++++
T Consensus         5 ~i~iY-------~~p~C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~eL~~~l~   51 (120)
T 3gkx_A            5 KTLFL-------QYPACSTCQKAKKWLIENNIEYTNRLIVDDNPTVEELKAWIP   51 (120)
T ss_dssp             CCEEE-------ECTTCHHHHHHHHHHHHTTCCCEEEETTTTCCCHHHHHHHHH
T ss_pred             EEEEE-------ECCCChHHHHHHHHHHHcCCceEEEecccCcCCHHHHHHHHH
Confidence            47899       567899887 99999999999999999988888999998876

>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A

Probab=96.65  E-value=0.0017  Score=56.94  Aligned_cols=47  Identities=13%  Similarity=0.212  Sum_probs=41.2

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcC
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGD  306 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~  306 (423)
                      .|+||       ..+.|+.|+ ++++|+.+||.|+++|+..++..+++|.++++.
T Consensus         3 ~itiY-------~~p~C~~crkak~~L~~~gi~~~~idi~~~~~~~~eL~~~~~~   50 (141)
T 1s3c_A            3 NITIY-------HNPASGTSRNTLEMIRNSGTEPTIILYLENPPSRDELVKLIAD   50 (141)
T ss_dssp             CCEEE-------CCTTCHHHHHHHHHHHHTTCCCEEECTTTSCCCHHHHHHHHHH
T ss_pred             cEEEE-------ECCCChHHHHHHHHHHHcCCCEEEEECCCCCccHHHHHHHhcc
Confidence            57899       667899888 999999999999999998888888898887753

>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0

Probab=96.64  E-value=0.0021  Score=54.72  Aligned_cols=47  Identities=17%  Similarity=0.258  Sum_probs=41.6

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcC
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGD  306 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~  306 (423)
                      -|+||       ..+.|+.|+ ++++|+.+||.|+++|+..++..++||.+.++.
T Consensus         4 Mi~iY-------~~~~C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~eL~~~l~~   51 (120)
T 3fz4_A            4 MLTFY-------EYPKCSTCRRAKAELDDLAWDYDAIDIKKNPPAASLIRNWLEN   51 (120)
T ss_dssp             SEEEE-------ECSSCHHHHHHHHHHHHHTCCEEEEETTTSCCCHHHHHHHHHH
T ss_pred             eEEEE-------eCCCChHHHHHHHHHHHcCCceEEEEeccCchhHHHHHHHHHH
Confidence            47899       556899887 999999999999999999888889999998864

>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1

Probab=96.54  E-value=0.0035  Score=46.73  Aligned_cols=64  Identities=13%  Similarity=0.277  Sum_probs=42.4

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHH----hC--CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCE--EE
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILK----GL--GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKK--YI  323 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~----~~--gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe--~I  323 (423)
                      .||+|       ..++|+.|. +...|+    .+  ++.+..+|++.+.+    +.+.    .+...+|.++|+|+  ++
T Consensus         4 ~vv~f-------~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~----~~~~----~~v~~~Pt~~~~G~~~~~   68 (85)
T 1nho_A            4 NIEVF-------TSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDRE----KAIE----YGLMAVPAIAINGVVRFV   68 (85)
T ss_dssp             CEEEE-------SCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCGG----GGGG----TCSSCSSEEEETTTEEEE
T ss_pred             EEEEE-------ECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCCHH----HHHh----CCceeeCEEEECCEEEEc
Confidence            46777       567999876 444443    33  58899999875543    2222    34568999999998  67


Q ss_pred             cc--hHHHHH
Q 045109          324 GG--AEEIRR  331 (423)
Q Consensus       324 GG--aDEV~~  331 (423)
                      |.  .+++.+
T Consensus        69 G~~~~~~l~~   78 (85)
T 1nho_A           69 GAPSREELFE   78 (85)
T ss_dssp             CSSCCHHHHH
T ss_pred             cCCCHHHHHH
Confidence            75  344444

>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}

Probab=96.17  E-value=0.0023  Score=62.52  Aligned_cols=78  Identities=9%  Similarity=0.050  Sum_probs=53.1

Q ss_pred             HhhhcCCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCC-h-hhHHHHHHHHcCCCCCCCCCceEeCCE
Q 045109          245 LDHKCGKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMH-S-GFKNELKELLGDGFSGGGLPRVFVGKK  321 (423)
Q Consensus       245 v~~li~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd-~-~~reEL~~lLg~~tg~~TVPQVFVdGe  321 (423)
                      +.+.+.+..||.|       ..++|+.|+ ++.+|++..-.+..+|++.+ . +...++.+..    +.+++|.+|+||+
T Consensus       192 la~~l~~~~vV~F-------~A~WC~~Ck~l~p~le~lA~~l~~Vd~d~~d~~~~~~~la~~~----gI~~vPT~~i~G~  260 (291)
T 3kp9_A          192 LAAHLRQIGGTMY-------GAYWCPHCQDQKELFGAAFDQVPYVECSPNGPGTPQAQECTEA----GITSYPTWIINGR  260 (291)
T ss_dssp             HHHHHHHTTCEEE-------ECTTCHHHHHHHHHHGGGGGGSCEEESCSSCSSSCCCHHHHTT----TCCSTTEEEETTE
T ss_pred             HHHHhCCCCEEEE-------ECCCCHHHHHHHHHHHHHHHHcCEEEEeecCchhhHHHHHHHc----CCcccCeEEECCE
Confidence            3345556678888       578999887 79999987655556666522 1 2133454443    4568999999999


Q ss_pred             EEcchHHHHHHH
Q 045109          322 YIGGAEEIRRMH  333 (423)
Q Consensus       322 ~IGGaDEV~~Lh  333 (423)
                      .+.|..+..+|.
T Consensus       261 ~~~G~~~~~~L~  272 (291)
T 3kp9_A          261 TYTGVRSLEALA  272 (291)
T ss_dssp             EEESCCCHHHHH
T ss_pred             EecCCCCHHHHH
Confidence            998887665543

>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}

Probab=96.08  E-value=0.0023  Score=54.32  Aligned_cols=46  Identities=20%  Similarity=0.197  Sum_probs=39.8

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHc
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLG  305 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg  305 (423)
                      .|.||       ..+.|+.|+ ++++|+.+||.|+++|+..++..++||.+.+.
T Consensus         5 ~i~iY-------~~p~C~~c~ka~~~L~~~gi~~~~~di~~~~~t~~eL~~~l~   51 (119)
T 3f0i_A            5 SVVIY-------HNPKCSKSRETLALLENQGIAPQVIKYLETSPSVEELKRLYQ   51 (119)
T ss_dssp             CCEEE-------CCTTCHHHHHHHHHHHHTTCCCEEECHHHHCCCHHHHHHHHH
T ss_pred             EEEEE-------ECCCChHHHHHHHHHHHcCCceEEEEeccCcCcHHHHHHHHH
Confidence            47899       667899887 99999999999999999777777888888775

>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}

Probab=96.08  E-value=0.0025  Score=52.19  Aligned_cols=69  Identities=10%  Similarity=0.088  Sum_probs=47.7

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChh--hHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSG--FKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEI  329 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~--~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV  329 (423)
                      .||.|       -.+||+.|+ ++.+|+...-.|..+|++.+..  ...+|.+.++    ...+|.++|+|+.+.|....
T Consensus        15 ~vV~F-------~A~WC~~C~~~~p~~~~~a~~~~~v~~~~~~~~~~~~~l~~~~~----V~~~PT~~i~G~~~~G~~~~   83 (106)
T 3kp8_A           15 GGTMY-------GAYWCPHCQDQKELFGAAFDQVPYVECSPNGPGTPQAQECTEAG----ITSYPTWIINGRTYTGVRSL   83 (106)
T ss_dssp             TCEEE-------ECTTCHHHHHHHHHHGGGGGGSCEEESCTTCTTSCCCHHHHHTT----CCSSSEEEETTEEEESCCCH
T ss_pred             EEEEE-------ECCCCHHHHHHHHHHHHHHHhCCEEEEecccccchhHHHHHHcC----CeEeCEEEECCEEecCCCCH
Confidence            46777       467999887 7888987766666777764432  2345555554    45899999999988776655


Q ss_pred             HHH
Q 045109          330 RRM  332 (423)
Q Consensus       330 ~~L  332 (423)
                      ..|
T Consensus        84 ~~l   86 (106)
T 3kp8_A           84 EAL   86 (106)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            443

>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1

Probab=96.02  E-value=0.0056  Score=45.57  Aligned_cols=53  Identities=11%  Similarity=0.273  Sum_probs=35.0

Q ss_pred             CCCCCcHHH-HHHHH----HhC--CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCE--EEcc
Q 045109          265 RKTYEDCCH-VRVIL----KGL--GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKK--YIGG  325 (423)
Q Consensus       265 RKT~c~Cc~-VK~LL----~~~--gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe--~IGG  325 (423)
                      ..++|+.|. +...|    +.+  ++.+..+|++.+.+.        ....+...+|.++|+|+  +.|.
T Consensus        10 ~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~--------~~~~~v~~~Pt~~~~G~~~~~G~   71 (85)
T 1fo5_A           10 TSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQK--------AMEYGIMAVPTIVINGDVEFIGA   71 (85)
T ss_dssp             ECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSCCT--------TTSTTTCCSSEEEETTEEECCSS
T ss_pred             eCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCCHHH--------HHHCCCcccCEEEECCEEeeecC
Confidence            457899876 44444    445  578888898755422        22334568999999998  5664

>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A

Probab=95.82  E-value=0.02  Score=45.53  Aligned_cols=65  Identities=23%  Similarity=0.336  Sum_probs=42.3

Q ss_pred             hhhcCCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhC-----CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe-
Q 045109          246 DHKCGKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGL-----GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV-  318 (423)
Q Consensus       246 ~~li~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~-----gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV-  318 (423)
                      +.+.....++|+++      .++|+.|. +...|+.+     ++.+..+|++..    .++.+.++    ...+|.+++ 
T Consensus        14 ~~~~~~~~~vv~f~------a~wC~~C~~~~~~l~~~~~~~~~v~~~~vd~~~~----~~l~~~~~----v~~~Pt~~~~   79 (110)
T 2l6c_A           14 AHFEGLSDAIVFFH------KNLCPHCKNMEKVLDKFGARAPQVAISSVDSEAR----PELMKELG----FERVPTLVFI   79 (110)
T ss_dssp             HHHTTCSEEEEEEE------CSSCSTHHHHHHHHHHHHTTCTTSCEEEEEGGGC----HHHHHHTT----CCSSCEEEEE
T ss_pred             HHHHcCCCEEEEEE------CCCCHhHHHHHHHHHHHHHHCCCcEEEEEcCcCC----HHHHHHcC----CcccCEEEEE
Confidence            44444556666654      47999876 55555433     477888887543    34555554    357999998 


Q ss_pred             -CCEEEc
Q 045109          319 -GKKYIG  324 (423)
Q Consensus       319 -dGe~IG  324 (423)
                       +|+.++
T Consensus        80 ~~G~~v~   86 (110)
T 2l6c_A           80 RDGKVAK   86 (110)
T ss_dssp             ESSSEEE
T ss_pred             ECCEEEE
Confidence             998776

>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A

Probab=95.67  E-value=0.021  Score=58.34  Aligned_cols=74  Identities=22%  Similarity=0.179  Sum_probs=51.6

Q ss_pred             CCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHh----C-CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEE
Q 045109          250 GKEKLVVYFTSLRGIRKTYEDCCH-VRVILKG----L-GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYI  323 (423)
Q Consensus       250 ~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~----~-gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~I  323 (423)
                      ..-.|++|       ..++|++|. +..+|+.    + +|.+..+|++..    .++.+.++    ..++|++||||+.+
T Consensus       117 ~~~~i~~f-------~a~~C~~C~~~~~~l~~~a~~~~~v~~~~vd~~~~----~~~~~~~~----i~svPt~~i~g~~~  181 (521)
T 1hyu_A          117 GDFEFETY-------YSLSCHNCPDVVQALNLMAVLNPRIKHTAIDGGTF----QNEITERN----VMGVPAVFVNGKEF  181 (521)
T ss_dssp             SCEEEEEE-------ECTTCSSHHHHHHHHHHHHHHCTTEEEEEEETTTC----HHHHHHTT----CCSSSEEEETTEEE
T ss_pred             CCcceEEE-------ECCCCcCcHHHHHHHHHHHhHcCceEEEEEechhh----HHHHHHhC----CCccCEEEECCEEE
Confidence            44568888       567999887 5555543    2 577888888633    35555554    45899999999998


Q ss_pred             cch----HHHHHHHHcCch
Q 045109          324 GGA----EEIRRMHEEGQL  338 (423)
Q Consensus       324 GGa----DEV~~LhEsGeL  338 (423)
                      +.-    +++.++.+.+.+
T Consensus       182 ~~G~~~~~~l~~~l~~~~~  200 (521)
T 1hyu_A          182 GQGRMTLTEIVAKVDTGAE  200 (521)
T ss_dssp             EESCCCHHHHHHHHCCSSC
T ss_pred             ecCCCCHHHHHHHHhhccc
Confidence            643    677777777655

>3ir4_A Glutaredoxin 2; glutathione, IDP00895, structural genomics, for structural genomics of infectious diseases, csgid, oxidoreductase; HET: MSE GSH; 1.20A {Salmonella enterica subsp} PDB: 1g7o_A

Probab=95.40  E-value=0.037  Score=48.85  Aligned_cols=69  Identities=13%  Similarity=0.169  Sum_probs=52.8

Q ss_pred             CcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceE-eCCEEEcchHHH
Q 045109          252 EKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVF-VGKKYIGGAEEI  329 (423)
Q Consensus       252 ~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVF-VdGe~IGGaDEV  329 (423)
                      +++.||       ....|++|. |+-+|+..||.|+.++|+....  ++..++.    ...+||.+. .+|..|.....|
T Consensus         2 ~~~~Ly-------~~~~sp~~~~v~~~l~~~gi~~~~~~v~~~~~--~~~~~~~----p~~~vP~l~~~~g~~l~eS~aI   68 (218)
T 3ir4_A            2 NAMKLY-------IYDHCPFCVKARMIFGLKNIPVELNVLQNDDE--ATPTRMI----GQKMVPILQKDDSRYLPESMDI   68 (218)
T ss_dssp             CCCEEE-------ECTTCHHHHHHHHHHHHHTCCCEEEECCTTCC--HHHHHHH----SSSCSCEEECTTSCEEECHHHH
T ss_pred             CeEEEE-------cCCCCchHHHHHHHHHHcCCceEEEECCCcch--hhhhhcC----CCceeeeEEEeCCeEeeCHHHH
Confidence            567899       456798877 8999999999999999986533  2333332    346999999 899999999888


Q ss_pred             HHHH
Q 045109          330 RRMH  333 (423)
Q Consensus       330 ~~Lh  333 (423)
                      .+..
T Consensus        69 ~~yL   72 (218)
T 3ir4_A           69 VHYV   72 (218)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7743

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1

Probab=95.07  E-value=0.015  Score=45.32  Aligned_cols=50  Identities=32%  Similarity=0.753  Sum_probs=36.4

Q ss_pred             ccccccCccce------EeCCCCCCcceeccccchhhhcccCCCCccccCcc-ceeeCCCCCCCCcc---cCCCCC
Q 045109          357 GACEACGDVRF------VPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADF-GFQRCPDCNENGLT---RCPICC  422 (423)
Q Consensus       357 ~~C~~CGG~rf------VpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~-~~~RC~~CNENGLi---rCp~C~  422 (423)
                      ..|..|.|.+.      ..|+.|+|+-+++...         +       .+ ....|+.|+-.|.+   +|+.|-
T Consensus        12 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~---------g-------~~~~~~~C~~C~G~G~~~~~~C~~C~   71 (79)
T 1exk_A           12 EECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQ---------G-------FFAVQQTCPHCQGRGTLIKDPCNKCH   71 (79)
T ss_dssp             EECGGGTTTSBCSSSCCEECTTTTTSSEEEEEE---------T-------TEEEEEECTTTTTSSEECSSBCGGGT
T ss_pred             eECCCCcccccCCCccCCCCCCCcCeEEEEEEc---------C-------CCEEeeECcCCCCccEECCCcCCCCC
Confidence            45888888774      6899999998776431         0       11 23589999999988   888883

>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}

Probab=94.48  E-value=0.14  Score=47.39  Aligned_cols=54  Identities=7%  Similarity=0.143  Sum_probs=37.0

Q ss_pred             CCCCCcHHH-HHHHHHh----------CCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCE--EEcch
Q 045109          265 RKTYEDCCH-VRVILKG----------LGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKK--YIGGA  326 (423)
Q Consensus       265 RKT~c~Cc~-VK~LL~~----------~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe--~IGGa  326 (423)
                      -.++|+.|. +..+|+.          .+|.+..+|++.+.    ++.+.++    ..++|.+||+|+  +.|..
T Consensus       146 ~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~----~~~~~~~----V~~vPt~~i~G~~~~~G~~  212 (243)
T 2hls_A          146 ITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENP----DIADKYG----VMSVPSIAINGYLVFVGVP  212 (243)
T ss_dssp             ECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCH----HHHHHTT----CCSSSEEEETTEEEEESCC
T ss_pred             ECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCH----HHHHHcC----CeeeCeEEECCEEEEeCCC
Confidence            357999887 5665543          46888999987543    3444443    458999999997  45553

>4f03_A Glutathione transferase; GST fold; 1.80A {Phanerochaete chrysosporium} PDB: 4g19_A*

Probab=94.40  E-value=0.19  Score=44.68  Aligned_cols=79  Identities=18%  Similarity=0.209  Sum_probs=53.8

Q ss_pred             CcEEEEE--eCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcC--------CCCCCCCCceEe--
Q 045109          252 EKLVVYF--TSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGD--------GFSGGGLPRVFV--  318 (423)
Q Consensus       252 ~kVVIYt--TSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~--------~tg~~TVPQVFV--  318 (423)
                      .+|++|-  ++++.-...+||+|. ||-+|..+||.|+.+.|++.  ........++.        .....+||.|-.  
T Consensus         3 ~pi~lYd~~~~~~~~~~~~SP~~~kvr~~L~~kgi~y~~~~v~~~--~~~~~~~~~g~~~~~~~~~~~P~~~VPvL~~~d   80 (253)
T 4f03_A            3 QPIVFYDIPSNERIKHSPWSPNTWKIRYALNYKGLKYKTEWVEYP--DIAGVVQKLGGKPTEKTPDGRDHYTLPVIYDPN   80 (253)
T ss_dssp             CCEEEEECCCCGGGTTCCCCHHHHHHHHHHHHHTCCEEEEECCGG--GHHHHHHHHTCCCSEECTTCCEECCSCEEEETT
T ss_pred             CCeEEeecCCCCCCCCCCcChhHHHHHHHHHHcCCCCEEEEEccc--cchhhhhhcCCCCchhhHhhCCCCccCeEEeCC
Confidence            4689994  222333467899886 99999999999999998642  23333333332        122358999987  


Q ss_pred             CCEEEcchHHHHHH
Q 045109          319 GKKYIGGAEEIRRM  332 (423)
Q Consensus       319 dGe~IGGaDEV~~L  332 (423)
                      +|..|.....|.+.
T Consensus        81 ~g~~l~ES~aI~~Y   94 (253)
T 4f03_A           81 TKKVVEDSAAIAKY   94 (253)
T ss_dssp             TTEEEESHHHHHHH
T ss_pred             CCEEEecHHHHHHH
Confidence            57888887777664

>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}

Probab=94.10  E-value=0.25  Score=42.18  Aligned_cols=24  Identities=21%  Similarity=0.292  Sum_probs=18.5

Q ss_pred             CCCCCCceEeCCEEEcchHHHHHH
Q 045109          309 SGGGLPRVFVGKKYIGGAEEIRRM  332 (423)
Q Consensus       309 g~~TVPQVFVdGe~IGGaDEV~~L  332 (423)
                      |-..+|.+||+|+.+-|+.....|
T Consensus       141 gv~gtPt~~i~g~~~~G~~~~~~l  164 (175)
T 3gyk_A          141 GFNGTPSFVVEDALVPGFVEQSQL  164 (175)
T ss_dssp             TCCSSSEEEETTEEECSCCCHHHH
T ss_pred             CCccCCEEEECCEEeeCCCCHHHH
Confidence            345799999999999887655444

>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1

Probab=93.85  E-value=0.39  Score=38.15  Aligned_cols=63  Identities=10%  Similarity=0.065  Sum_probs=39.7

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-H----HHHHHhCCCcEEEEECCCCh--hhHHHHHHHHcCCCCCCCCCceEe--CCE
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-V----RVILKGLGVRVDERDLSMHS--GFKNELKELLGDGFSGGGLPRVFV--GKK  321 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-V----K~LL~~~gV~yeErDVsmd~--~~reEL~~lLg~~tg~~TVPQVFV--dGe  321 (423)
                      ...|+||+.      .++|+.|. +    .++.+.+++.+...|++...  ....++.+.++    -..+|.+++  +|+
T Consensus        29 ~~~~~v~f~------a~wC~~C~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~----i~~~Pt~~~~~~G~   98 (118)
T 1zma_A           29 KETATFFIG------RKTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYG----IPTVPGFVHITDGQ   98 (118)
T ss_dssp             TCCEEEEEE------CTTCHHHHHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHT----CCSSCEEEEEETTE
T ss_pred             CCeEEEEEE------CCCCccHHHHHHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcC----CCCCCeEEEEECCE
Confidence            446777754      58999886 3    45556667777888876432  22345555554    347898764  786


Q ss_pred             EE
Q 045109          322 YI  323 (423)
Q Consensus       322 ~I  323 (423)
                      .+
T Consensus        99 ~~  100 (118)
T 1zma_A           99 IN  100 (118)
T ss_dssp             EE
T ss_pred             EE
Confidence            54

>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1

Probab=93.75  E-value=0.31  Score=35.54  Aligned_cols=49  Identities=20%  Similarity=0.201  Sum_probs=32.9

Q ss_pred             CCCcHHH-H----HHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEc
Q 045109          267 TYEDCCH-V----RVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIG  324 (423)
Q Consensus       267 T~c~Cc~-V----K~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IG  324 (423)
                      ++|+.|. +    .++.+.++..+....|+ +    .++.+.++    ...+|.++|+|+.+.
T Consensus         9 ~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~-~----~~~~~~~~----v~~~Pt~~~~G~~~~   62 (77)
T 1ilo_A            9 TGCANCQMLEKNAREAVKELGIDAEFEKIK-E----MDQILEAG----LTALPGLAVDGELKI   62 (77)
T ss_dssp             SSSSTTHHHHHHHHHHHHHTTCCEEEEEEC-S----HHHHHHHT----CSSSSCEEETTEEEE
T ss_pred             CCChhHHHHHHHHHHHHHHcCCceEEEEec-C----HHHHHHCC----CCcCCEEEECCEEEE
Confidence            5898775 3    44556677677777765 2    34555554    357999999998753

>3fy7_A Chloride intracellular channel protein 3; GST, glutathione, CLIC, chloride channel, ION transport, ionic channel, nucleus, transport, gated channel; 1.95A {Homo sapiens} PDB: 3kjy_A

Probab=93.73  E-value=0.19  Score=45.92  Aligned_cols=79  Identities=18%  Similarity=0.222  Sum_probs=51.5

Q ss_pred             CCCcEEEEEe-CCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchH
Q 045109          250 GKEKLVVYFT-SLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAE  327 (423)
Q Consensus       250 ~~~kVVIYtT-SLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaD  327 (423)
                      .+..|.||.- +..|.+..+||+|. |+-+|+..||.|+.+.|++. ....++.++.    ...+||.+.+||..|....
T Consensus        22 ~~~~i~l~~ka~~~~~s~~~sP~~~rv~~~L~~~gi~ye~~~v~~~-~~~~~~~~~n----P~g~VPvL~~dg~~l~ES~   96 (250)
T 3fy7_A           22 AETKLQLFVKASEDGESVGHCPSCQRLFMVLLLKGVPFTLTTVDTR-RSPDVLKDFA----PGSQLPILLYDSDAKTDTL   96 (250)
T ss_dssp             ---CEEEEEEBCTTSSSBCSCHHHHHHHHHHHHHTCCCEEEEEC-------------------CCSCEEEETTEEECCHH
T ss_pred             cCCCceEEEEeCCCCCCCCCChHHHHHHHHHHHcCCccEEEECCCc-cChHHHHhhC----CCCCCCEEEECCEEecCHH
Confidence            3557888863 33455667899987 89999999999999988754 2223444332    2458999999999999988


Q ss_pred             HHHHHH
Q 045109          328 EIRRMH  333 (423)
Q Consensus       328 EV~~Lh  333 (423)
                      .|.+..
T Consensus        97 aI~~YL  102 (250)
T 3fy7_A           97 QIEDFL  102 (250)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            887743

>2cz2_A Maleylacetoacetate isomerase; structural genomics, GST, GSTZ1-1, NPPSFA, national project protein structural and functional analyses; HET: GSH; 1.40A {Mus musculus} PDB: 2cz3_A 1fw1_A*

Probab=93.68  E-value=0.22  Score=44.03  Aligned_cols=71  Identities=18%  Similarity=0.233  Sum_probs=53.0

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChh----hHHHHHHHHcCCCCCCCCCceEeCCEEEcc
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSG----FKNELKELLGDGFSGGGLPRVFVGKKYIGG  325 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~----~reEL~~lLg~~tg~~TVPQVFVdGe~IGG  325 (423)
                      .+++.||+       -..|+++. |+-+|+..||.|+.+.++....    ...++.++.    ...+||.+..+|..|..
T Consensus        10 ~~~~~Ly~-------~~~sp~~~~v~~~L~~~gi~~e~~~v~~~~~~~e~~~~~~~~~n----P~g~vP~L~~~g~~l~e   78 (223)
T 2cz2_A           10 AGKPILYS-------YFRSSCSWRVRIALALKGIDYEIVPINLIKDGGQQFTEEFQTLN----PMKQVPALKIDGITIVQ   78 (223)
T ss_dssp             -CCCEEEE-------CTTCHHHHHHHHHHHHTTCCCEEEECCSSGGGCGGGSHHHHHHC----TTCCSCEEEETTEEEES
T ss_pred             cCceEEEe-------cCCCChHHHHHHHHHhcCCCCeEEEeecccCchhhcCHHHhccC----CCCCCCEEEECCEEEee
Confidence            45688993       34588876 8999999999999999986532    234555442    23589999999999998


Q ss_pred             hHHHHHH
Q 045109          326 AEEIRRM  332 (423)
Q Consensus       326 aDEV~~L  332 (423)
                      ...|.+.
T Consensus        79 S~aI~~y   85 (223)
T 2cz2_A           79 SLAIMEY   85 (223)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            8888774

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.64  E-value=0.058  Score=44.48  Aligned_cols=51  Identities=25%  Similarity=0.585  Sum_probs=35.6

Q ss_pred             CccccccCccc------eEeCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCcc---cCCCC
Q 045109          356 VGACEACGDVR------FVPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLT---RCPIC  421 (423)
Q Consensus       356 ~~~C~~CGG~r------fVpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLi---rCp~C  421 (423)
                      ...|..|.|.+      ...|+.|+|+-.+....         |.      -.....|+.|+=.|.+   +|+.|
T Consensus        28 ~~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~---------G~------~~~~~~C~~C~G~G~~i~~~C~~C   87 (104)
T 2ctt_A           28 MDTCERCNGKGNEPGTKVQHCHYCGGSGMETINT---------GP------FVMRSTCRRCGGRGSIIISPCVVC   87 (104)
T ss_dssp             CEECSSSSSSSSCTTCCCEECSSSSSSCEEEEEE---------TT------EEEEEECSSSSSSSEECSSCCSSS
T ss_pred             eeECCCCcCCccCCCCCCccCCCCCCCEEEEEEe---------CC------EEEEEECCcCCCcceECCCcCCCC
Confidence            35688888876      57899999997665431         00      0124679999888887   78888

>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A

Probab=93.43  E-value=0.62  Score=34.95  Aligned_cols=59  Identities=19%  Similarity=0.243  Sum_probs=38.5

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HHHHH----HhC-CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCEE
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VRVIL----KGL-GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKKY  322 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL----~~~-gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe~  322 (423)
                      ...|+||++      .++|+.|. +...|    +.+ ++.+..+|++.+.    ++.+.++    ...+|.+++  +|+.
T Consensus        16 ~~~~~v~f~------~~~C~~C~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~----v~~~Pt~~~~~~g~~   81 (104)
T 2e0q_A           16 HEIAVVDFW------AEWCAPCLILAPIIEELAEDYPQVGFGKLNSDENP----DIAARYG----VMSLPTVIFFKDGEP   81 (104)
T ss_dssp             SSEEEEEEE------CTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCH----HHHHHTT----CCSSCEEEEEETTEE
T ss_pred             CCcEEEEEE------CCCChhHHHHhHHHHHHHHHcCCceEEEEECCCCH----HHHHhCC----ccccCEEEEEECCeE
Confidence            345666654      47999886 44333    344 4888888887553    4545544    357999998  8876


Q ss_pred             E
Q 045109          323 I  323 (423)
Q Consensus       323 I  323 (423)
                      +
T Consensus        82 ~   82 (104)
T 2e0q_A           82 V   82 (104)
T ss_dssp             E
T ss_pred             h
Confidence            5

>3vln_A GSTO-1, glutathione S-transferase omega-1; GST fold, reductase; HET: ASC; 1.70A {Homo sapiens} PDB: 1eem_A* 3lfl_A*

Probab=93.29  E-value=0.16  Score=45.43  Aligned_cols=72  Identities=13%  Similarity=0.151  Sum_probs=54.2

Q ss_pred             cCCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe-CCEEEcch
Q 045109          249 CGKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV-GKKYIGGA  326 (423)
Q Consensus       249 i~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV-dGe~IGGa  326 (423)
                      +..++++||       .-..|++|. ++-+|+..||.|+.+.|+... ..+++.++.    ...+||.+.+ +|..|...
T Consensus        19 ~~~~~~~Ly-------~~~~sp~~~~v~~~L~~~gi~ye~~~v~~~~-~~~~~~~~~----P~g~vP~L~~~~g~~l~eS   86 (241)
T 3vln_A           19 VPEGSIRIY-------SMRFSPFAERTRLVLKAKGIRHEVININLKN-KPEWFFKKN----PFGLVPVLENSQGQLIYES   86 (241)
T ss_dssp             CCTTCEEEE-------ECTTCHHHHHHHHHHHHHTCCEEEEEBCTTS-CCTTHHHHC----TTCCSCEEECTTCCEEESH
T ss_pred             CCCCeEEEE-------cCCCCcHHHHHHHHHHHcCCCCeEEecCccc-CCHHHHHhC----CCCCCCEEEECCCcEEEcH
Confidence            456789999       456798877 899999999999999987543 122343332    2358999999 99999888


Q ss_pred             HHHHHH
Q 045109          327 EEIRRM  332 (423)
Q Consensus       327 DEV~~L  332 (423)
                      ..|.+.
T Consensus        87 ~aI~~y   92 (241)
T 3vln_A           87 AITCEY   92 (241)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            887764

>1k0m_A CLIC1, NCC27, chloride intracellular channel protein 1; glutathione-S-tranferase superfamily, chloride ION channel, metal transport; 1.40A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 1k0n_A* 1k0o_A 1rk4_A 3uvh_A 3o3t_A 3p90_A 3qr6_A 3p8w_A 3tgz_A 3ma4_A 3swl_A

Probab=93.28  E-value=0.3  Score=44.35  Aligned_cols=78  Identities=14%  Similarity=0.245  Sum_probs=57.0

Q ss_pred             CCcEEEEEeC-CCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHH
Q 045109          251 KEKLVVYFTS-LRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEE  328 (423)
Q Consensus       251 ~~kVVIYtTS-LrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDE  328 (423)
                      ...+.||... ..|.+...||+|. |+-+|+.+||.|+.+.|+.. ....++.++.    ...+||.+..+|..|.....
T Consensus         5 ~~~~~Ly~~~~~~g~~~~~sp~~~rv~~~L~~~gi~ye~~~v~~~-~~~~~~~~~n----P~g~VPvL~~~g~~l~eS~a   79 (241)
T 1k0m_A            5 QPQVELFVKAGSDGAKIGNCPFSQRLFMVLWLKGVTFNVTTVDTK-RRTETVQKLC----PGGELPFLLYGTEVHTDTNK   79 (241)
T ss_dssp             -CCEEEEEEBCTTSSSBCSCHHHHHHHHHHHHHTCCCEEEEECTT-SCCHHHHHHC----TTCCSSEEEETTEEEECHHH
T ss_pred             CCceEEEeecCCCCCCCCCCHHHHHHHHHHHHcCCccEEEEcCCc-ccHHHHHHhC----CCCCCCEEEECCEEecCHHH
Confidence            3467888653 3566667899886 89999999999999888753 2334555432    23589999999999988888


Q ss_pred             HHHHH
Q 045109          329 IRRMH  333 (423)
Q Consensus       329 V~~Lh  333 (423)
                      |.+..
T Consensus        80 I~~yL   84 (241)
T 1k0m_A           80 IEEFL   84 (241)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87743

>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...

Probab=93.25  E-value=1.1  Score=34.12  Aligned_cols=61  Identities=18%  Similarity=0.278  Sum_probs=39.8

Q ss_pred             CCCcEEEEEeCCCCCCCCCCcHHH-HHHHHH----hC-CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCE
Q 045109          250 GKEKLVVYFTSLRGIRKTYEDCCH-VRVILK----GL-GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKK  321 (423)
Q Consensus       250 ~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~----~~-gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe  321 (423)
                      ....|+||++      .++|+.|. +...|+    .+ ++.+..+|++...    ++.+.++    ...+|.+++  +|+
T Consensus        19 ~~~~~~v~f~------~~~C~~C~~~~~~~~~~~~~~~~~~~~~vd~~~~~----~~~~~~~----v~~~Pt~~~~~~g~   84 (105)
T 3m9j_A           19 GDKLVVVDFS------ATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQ----DVASESE----VKSMPTFQFFKKGQ   84 (105)
T ss_dssp             TTSCEEEEEE------CTTCHHHHHHHHHHHHHHHHSTTSEEEEEETTTCH----HHHHHTT----CCBSSEEEEEETTE
T ss_pred             CCCeEEEEEE------CCCChhhHHHHHHHHHHHHHccCeEEEEEEhhhhH----HHHHHcC----CCcCcEEEEEECCe
Confidence            3556777665      47999887 444444    33 6888888887543    4555554    357999888  887


Q ss_pred             EEc
Q 045109          322 YIG  324 (423)
Q Consensus       322 ~IG  324 (423)
                      .++
T Consensus        85 ~~~   87 (105)
T 3m9j_A           85 KVG   87 (105)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            653

>1z9h_A Membrane-associated prostaglandin E synthase-2; membran associated protein, indomethacin, isomerase; HET: IMN; 2.60A {Macaca fascicularis} SCOP: a.45.1.1 c.47.1.5 PDB: 2pbj_A*

Probab=93.09  E-value=0.21  Score=46.59  Aligned_cols=70  Identities=14%  Similarity=0.167  Sum_probs=50.4

Q ss_pred             CCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeC--C--EEEc
Q 045109          250 GKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVG--K--KYIG  324 (423)
Q Consensus       250 ~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVd--G--e~IG  324 (423)
                      ....++||       ....|++|. |+.+|+.+||.|+.++|+..  .+.++     ...+..+||.|.++  |  ..|.
T Consensus        11 ~~~~~~Ly-------~~~~sp~~~~v~~~L~~~gi~~~~~~v~~~--~~~~~-----~~~p~~~vP~l~~~~~g~~~~l~   76 (290)
T 1z9h_A           11 SRLQLTLY-------QYKTCPFCSKVRAFLDFHALPYQVVEVNPV--LRAEI-----KFSSYRKVPILVAQEGESSQQLN   76 (290)
T ss_dssp             --CEEEEE-------ECTTCHHHHHHHHHHHHTTCCEEEEECCTT--TCGGG-----TTCSCCSSCEEEEEETTEEEEEC
T ss_pred             CCCCEEEE-------eCCCChHHHHHHHHHHHcCCCeEEEECChh--hHHHH-----HHcCCCCCCEEEECCCCCeEEec
Confidence            34568999       446798886 89999999999999999632  12233     13456799999985  3  6888


Q ss_pred             chHHHHHHH
Q 045109          325 GAEEIRRMH  333 (423)
Q Consensus       325 GaDEV~~Lh  333 (423)
                      ....|.+..
T Consensus        77 eS~aI~~yL   85 (290)
T 1z9h_A           77 DSSVIISAL   85 (290)
T ss_dssp             SHHHHHHHH
T ss_pred             CHHHHHHHH
Confidence            888887743

>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A

Probab=93.08  E-value=0.57  Score=35.59  Aligned_cols=59  Identities=15%  Similarity=0.187  Sum_probs=38.0

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HH----HHHHhC--CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCE
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VR----VILKGL--GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKK  321 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK----~LL~~~--gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe  321 (423)
                      ...++||++      .++|+.|. +.    ++.+.+  ++.+..+|++.+.    ++.+.++    ...+|.+++  +|+
T Consensus        18 ~~~~lv~f~------~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~----v~~~Pt~~~~~~g~   83 (109)
T 2yzu_A           18 HPLVLVDFW------AEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENP----KTAMRYR----VMSIPTVILFKDGQ   83 (109)
T ss_dssp             CSEEEEEEE------CTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCH----HHHHHTT----CCSSSEEEEEETTE
T ss_pred             CCeEEEEEE------CCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCH----hHHHhCC----CCcCCEEEEEeCCc
Confidence            345666654      47899887 33    444444  3778888886543    4445444    357999988  887


Q ss_pred             EE
Q 045109          322 YI  323 (423)
Q Consensus       322 ~I  323 (423)
                      .+
T Consensus        84 ~~   85 (109)
T 2yzu_A           84 PV   85 (109)
T ss_dssp             EE
T ss_pred             Ee
Confidence            54

>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A

Probab=93.06  E-value=1.3  Score=35.26  Aligned_cols=68  Identities=16%  Similarity=0.252  Sum_probs=41.6

Q ss_pred             hHHHhhhcC-CCcEEEEEeCCCCCCCCCCcHHH-HH----HHHHhC--CCcEEEEECCCChhhHHHHHHHHcCCCCCCCC
Q 045109          242 GAVLDHKCG-KEKLVVYFTSLRGIRKTYEDCCH-VR----VILKGL--GVRVDERDLSMHSGFKNELKELLGDGFSGGGL  313 (423)
Q Consensus       242 ~~~v~~li~-~~kVVIYtTSLrGIRKT~c~Cc~-VK----~LL~~~--gV~yeErDVsmd~~~reEL~~lLg~~tg~~TV  313 (423)
                      +.+.+.+.. ...||||+.      .++|+.|. +.    ++.+.+  +|.+..+|++.+.    ++.+.++    ...+
T Consensus        21 ~~f~~~v~~~~k~vlv~f~------a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~----~l~~~~~----v~~~   86 (119)
T 1w4v_A           21 PDFQDRVVNSETPVVVDFH------AQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHT----DLAIEYE----VSAV   86 (119)
T ss_dssp             HHHHHHTTTCSSCEEEEEE------CTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTH----HHHHHTT----CCSS
T ss_pred             hhHHHHHHcCCCcEEEEEE------CCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCH----HHHHHcC----CCcc
Confidence            344433333 345667654      47999886 33    344444  4778888886543    4555554    3579


Q ss_pred             CceEe--CCEEE
Q 045109          314 PRVFV--GKKYI  323 (423)
Q Consensus       314 PQVFV--dGe~I  323 (423)
                      |.++|  +|+.+
T Consensus        87 Pt~~~~~~G~~~   98 (119)
T 1w4v_A           87 PTVLAMKNGDVV   98 (119)
T ss_dssp             SEEEEEETTEEE
T ss_pred             cEEEEEeCCcEE
Confidence            99988  89753

>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1

Probab=93.04  E-value=0.85  Score=35.19  Aligned_cols=59  Identities=14%  Similarity=0.341  Sum_probs=38.5

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-H----HHHHHhC--CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCE
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-V----RVILKGL--GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKK  321 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-V----K~LL~~~--gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe  321 (423)
                      ...++||++      .++|+.|. +    .++.+.+  +|.+..+|++.+.    ++.+.++    ...+|.+++  +|+
T Consensus        25 ~~~~lv~f~------~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~----~~~~~~~----v~~~Pt~~~~~~G~   90 (115)
T 1thx_A           25 EQPVLVYFW------ASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNP----TTVKKYK----VEGVPALRLVKGEQ   90 (115)
T ss_dssp             SSCEEEEEE------CTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCH----HHHHHTT----CCSSSEEEEEETTE
T ss_pred             CceEEEEEE------CCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCH----HHHHHcC----CCceeEEEEEcCCE
Confidence            445666654      47899876 3    3444444  3888888887553    4555544    357999988  887


Q ss_pred             EE
Q 045109          322 YI  323 (423)
Q Consensus       322 ~I  323 (423)
                      .+
T Consensus        91 ~~   92 (115)
T 1thx_A           91 IL   92 (115)
T ss_dssp             EE
T ss_pred             EE
Confidence            54

>1e6b_A Glutathione S-transferase; 1.65A {Arabidopsis thaliana} SCOP: a.45.1.1 c.47.1.5

Probab=93.00  E-value=0.31  Score=42.81  Aligned_cols=72  Identities=24%  Similarity=0.343  Sum_probs=52.0

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCCh--hhHHHHHHHHcCCCCCCCCCceEeCCEEEcchH
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHS--GFKNELKELLGDGFSGGGLPRVFVGKKYIGGAE  327 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~--~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaD  327 (423)
                      ..++.||+       -..|+++. |+-+|+..||.|+.+.++...  ....++.+..    ...+||.+..+|..|....
T Consensus         6 ~~~~~Ly~-------~~~s~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~n----P~g~vP~L~~~g~~l~eS~   74 (221)
T 1e6b_A            6 EEKLKLYS-------YWRSSCAHRVRIALALKGLDYEYIPVNLLKGDQFDSDFKKIN----PMGTVPALVDGDVVINDSF   74 (221)
T ss_dssp             --CCEEEE-------CTTCHHHHHHHHHHHHTTCCCEEEECCTTTTGGGCHHHHHHC----TTCCSSEEEETTEEEESHH
T ss_pred             CCCeEEEe-------cCCCCchHHHHHHHHHcCCCCEEEEecCCcccccCHHHHhhC----CCCCCCEEEECCEEEeeHH
Confidence            34678993       34588876 899999999999999987542  1234554432    2358999999999999888


Q ss_pred             HHHHHH
Q 045109          328 EIRRMH  333 (423)
Q Consensus       328 EV~~Lh  333 (423)
                      .|.+..
T Consensus        75 aI~~yL   80 (221)
T 1e6b_A           75 AIIMYL   80 (221)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            887743

>2ahe_A Chloride intracellular channel protein 4; glutathione-S-transferase superfamily, CLIC4, NCC27, chloride ION channel, metal transport; 1.80A {Homo sapiens} PDB: 2d2z_A

Probab=92.99  E-value=0.36  Score=44.89  Aligned_cols=78  Identities=13%  Similarity=0.124  Sum_probs=55.9

Q ss_pred             CCcEEEEEeCC-CCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHH
Q 045109          251 KEKLVVYFTSL-RGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEE  328 (423)
Q Consensus       251 ~~kVVIYtTSL-rGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDE  328 (423)
                      ...|.||..-. .|.....|++|. |+-+|+.+||.|+.+.+++.. ...++.++.    ...+||.|..+|..|.....
T Consensus        16 ~~~i~ly~~~~~~~~~~~~~p~~~rv~~~L~~~gi~ye~~~v~~~~-~~~~~~~~n----P~gkVPvL~~~g~~l~ES~a   90 (267)
T 2ahe_A           16 EPLIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLKR-KPADLQNLA----PGTHPPFITFNSEVKTDVNK   90 (267)
T ss_dssp             CCCEEEEEEBCTTSSSBCSCHHHHHHHHHHHHHTCCCEEEEECTTS-CCHHHHHHS----TTCCSCEEEETTEEECCHHH
T ss_pred             CCCEEEEEecCCCccCCCCCchHHHHHHHHHHcCCCCEEEEeCccc-ChHHHHHhC----CCCCCCEEEECCEEecCHHH
Confidence            45688994322 233456799886 899999999999998887532 223444432    23589999999999999888


Q ss_pred             HHHHH
Q 045109          329 IRRMH  333 (423)
Q Consensus       329 V~~Lh  333 (423)
                      |.+..
T Consensus        91 I~~YL   95 (267)
T 2ahe_A           91 IEEFL   95 (267)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87743

>4g10_A Glutathione S-transferase homolog; thioredoxin fold; HET: MSE GSH; 1.20A {Sphingomonas paucimobilis}

Probab=92.98  E-value=0.22  Score=46.21  Aligned_cols=72  Identities=18%  Similarity=0.231  Sum_probs=51.4

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe-CCEEEcchHH
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV-GKKYIGGAEE  328 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV-dGe~IGGaDE  328 (423)
                      .+.+.||       .-..||++. |+-+|+.+||.|+.+.|++...--+.+...+.   ...+||.+-+ ||..|.....
T Consensus         4 p~~~~LY-------~~~~sP~~~rv~i~L~e~gi~ye~~~vd~~~~~pe~~~~~~n---P~g~VPvL~~d~g~~l~ES~a   73 (265)
T 4g10_A            4 PQELTIY-------HIPGCPFSERVEIMLELKGLRMKDVEIDISKPRPDWLLAKTG---GTTALPLLDVENGESLKESMV   73 (265)
T ss_dssp             CCCCEEE-------ECTTCHHHHHHHHHHHHHTCCCEEEECCTTSCCCHHHHHHHT---SCCCSCEEECTTSCEEECHHH
T ss_pred             CCceEEE-------ecCCChHHHHHHHHHHHhCCCCEEEEeCCCCCCcHHHHHhcC---CCCccceEEECCCeEEeccHH
Confidence            4578899       445799886 99999999999999988754322233333333   2358999987 7788887777


Q ss_pred             HHHH
Q 045109          329 IRRM  332 (423)
Q Consensus       329 V~~L  332 (423)
                      |.+.
T Consensus        74 I~~Y   77 (265)
T 4g10_A           74 ILRY   77 (265)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7664

>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B

Probab=92.98  E-value=1.2  Score=35.02  Aligned_cols=60  Identities=13%  Similarity=0.248  Sum_probs=38.6

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HHHHHH----hC-CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCEE
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VRVILK----GL-GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKKY  322 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~----~~-gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe~  322 (423)
                      ...|+|+++      .++|+.|. +...|+    .+ ++.+..+|++...    ++.+.++    ...+|.+++  +|+.
T Consensus        24 ~k~vlv~f~------a~wC~~C~~~~p~l~~l~~~~~~~~~~~vd~~~~~----~l~~~~~----v~~~Pt~~~~~~G~~   89 (109)
T 3f3q_A           24 DKLVVVDFY------ATWCGPCKMIAPMIEKFSEQYPQADFYKLDVDELG----DVAQKNE----VSAMPTLLLFKNGKE   89 (109)
T ss_dssp             SSCEEEEEE------CTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCH----HHHHHTT----CCSSSEEEEEETTEE
T ss_pred             CCEEEEEEE------CCcCHhHHHHHHHHHHHHHHCCCCEEEEEECCCCH----HHHHHcC----CCccCEEEEEECCEE
Confidence            455666654      47999887 444443    33 5788888887543    4555544    357899877  8866


Q ss_pred             Ec
Q 045109          323 IG  324 (423)
Q Consensus       323 IG  324 (423)
                      +.
T Consensus        90 ~~   91 (109)
T 3f3q_A           90 VA   91 (109)
T ss_dssp             EE
T ss_pred             EE
Confidence            54

>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}

Probab=92.82  E-value=0.58  Score=35.65  Aligned_cols=60  Identities=18%  Similarity=0.269  Sum_probs=38.4

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HHHHH----HhC--CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCE
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VRVIL----KGL--GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKK  321 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL----~~~--gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe  321 (423)
                      ...|+||++      .++|+.|. +...|    +.+  ++.+..+|++.+.    ++.+.++    ...+|.+++  +|+
T Consensus        20 ~~~~lv~f~------~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~----v~~~Pt~~~~~~G~   85 (107)
T 2i4a_A           20 SGLVLVDFW------AEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNP----ETPNAYQ----VRSIPTLMLVRDGK   85 (107)
T ss_dssp             SSEEEEEEE------CTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCC----HHHHHTT----CCSSSEEEEEETTE
T ss_pred             CCEEEEEEE------CCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCH----HHHHhcC----CCccCEEEEEeCCE
Confidence            456666654      47899886 44333    333  4778888887554    3444443    357999988  997


Q ss_pred             EEc
Q 045109          322 YIG  324 (423)
Q Consensus       322 ~IG  324 (423)
                      .++
T Consensus        86 ~~~   88 (107)
T 2i4a_A           86 VID   88 (107)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            653

>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1

Probab=92.81  E-value=1.1  Score=35.23  Aligned_cols=59  Identities=17%  Similarity=0.192  Sum_probs=37.9

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HHHHHH----hC-CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCEE
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VRVILK----GL-GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKKY  322 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~----~~-gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe~  322 (423)
                      ...|+||++      .++|+.|. +...|+    .+ +|.+..+|++.+.    ++.+.++    ...+|.+++  +|+.
T Consensus        26 ~k~vlv~f~------a~~C~~C~~~~~~l~~l~~~~~~v~~~~vd~~~~~----~~~~~~~----v~~~Pt~~~~~~G~~   91 (112)
T 1syr_A           26 NELVIVDFF------AEWCGPCKRIAPFYEECSKTYTKMVFIKVDVDEVS----EVTEKEN----ITSMPTFKVYKNGSS   91 (112)
T ss_dssp             CSEEEEEEE------CTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTTH----HHHHHTT----CCSSSEEEEEETTEE
T ss_pred             CCeEEEEEE------CCCCHHHHHHHHHHHHHHHHcCCCEEEEEECCCCH----HHHHHcC----CCcccEEEEEECCcE
Confidence            445666654      47999887 444443    33 5888888886443    4555554    357898877  8875


Q ss_pred             E
Q 045109          323 I  323 (423)
Q Consensus       323 I  323 (423)
                      +
T Consensus        92 ~   92 (112)
T 1syr_A           92 V   92 (112)
T ss_dssp             E
T ss_pred             E
Confidence            4

>1axd_A Glutathione S-transferase I; transferase, herbicide detoxification, transferase-transfera inhibitor complex; HET: GGL CYW; 2.50A {Zea mays} SCOP: a.45.1.1 c.47.1.5 PDB: 1bye_A*

Probab=92.80  E-value=0.25  Score=42.66  Aligned_cols=69  Identities=13%  Similarity=0.101  Sum_probs=51.4

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChh--hHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSG--FKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEI  329 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~--~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV  329 (423)
                      ++.||       .-..|++|. |+-+|+..||.|+.+.++....  ...++.+    .....+||.+..+|..|.....|
T Consensus         2 ~~~Ly-------~~~~sp~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~----~~P~g~vP~L~~~g~~l~eS~aI   70 (209)
T 1axd_A            2 PMKLY-------GAVMSWNLTRCATALEEAGSDYEIVPINFATAEHKSPEHLV----RNPFGQVPALQDGDLYLFESRAI   70 (209)
T ss_dssp             CEEEE-------SCTTCTTHHHHHHHHHHHTCCEEEECCCTTTTGGGSHHHHT----TCTTCCSCEEEETTEEEESHHHH
T ss_pred             ceEEE-------eCCCCchHHHHHHHHHhcCCCCEEEeccccccCcCChHHHH----hCcCCCCCeEEECCEEEecHHHH
Confidence            47788       445788776 9999999999999998875431  1234332    23346899999999999999888


Q ss_pred             HHH
Q 045109          330 RRM  332 (423)
Q Consensus       330 ~~L  332 (423)
                      .+.
T Consensus        71 ~~y   73 (209)
T 1axd_A           71 CKY   73 (209)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            774

>4hi7_A GI20122; GST, glutathione S-transferase, enzyme function initiative, structural genomics, unknown function; HET: GSH; 1.25A {Drosophila mojavensis}

Probab=92.77  E-value=0.27  Score=43.62  Aligned_cols=69  Identities=16%  Similarity=0.171  Sum_probs=51.3

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChh--hHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSG--FKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEI  329 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~--~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV  329 (423)
                      +.|||       .-..|+|+. |+-+|+..||.|+.+.|++...  ...++.++-    ...+||.+-.||..|.....|
T Consensus         3 kpiLY-------~~~~Sp~~~~vr~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~n----P~g~vP~L~d~~~~l~eS~aI   71 (228)
T 4hi7_A            3 KPILY-------GIDASPPVRAVKLTLAALQLPYDYKIVNLMNKEQHSEEYLKKN----PQHTVPLLEDGDANIADSHAI   71 (228)
T ss_dssp             CCEEE-------ECTTCHHHHHHHHHHHHHTCCCEEEECCTTTTGGGSHHHHHHC----TTCCSCEEEETTEEEESHHHH
T ss_pred             ceEEE-------ECCCChHHHHHHHHHHHhCCCCEEEEecCCCcccCCHHHHHhC----CCCceeeEEECCEEEechHHH
Confidence            34688       345799887 8999999999999988875432  234554432    234899999999999988888


Q ss_pred             HHH
Q 045109          330 RRM  332 (423)
Q Consensus       330 ~~L  332 (423)
                      .+.
T Consensus        72 ~~Y   74 (228)
T 4hi7_A           72 MAY   74 (228)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            774

>1yy7_A SSPA, stringent starvation protein A; GST fold, transcription; HET: CIT; 2.02A {Yersinia pestis}

Probab=92.68  E-value=0.35  Score=42.42  Aligned_cols=70  Identities=16%  Similarity=0.215  Sum_probs=52.1

Q ss_pred             CcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHH
Q 045109          252 EKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIR  330 (423)
Q Consensus       252 ~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~  330 (423)
                      ..+.||+       -..|++|. |+-+|+..||.|+.+.++.. ....++.+..    ...+||.+-.+|..|.....|.
T Consensus         9 ~~~~Ly~-------~~~s~~~~~v~~~L~~~gi~~e~~~v~~~-~~~~~~~~~~----P~g~vP~L~~~g~~l~eS~aI~   76 (213)
T 1yy7_A            9 SVMTLFS-------GPTDIFSHQVRIVLAEKGVSVEIEQVEAD-NLPQDLIDLN----PYRTVPTLVDRELTLYESRIIM   76 (213)
T ss_dssp             SSEEEEE-------CTTCHHHHHHHHHHHHHTCCEEEEECCTT-SCCHHHHHHC----TTCCSSEEEETTEEEESHHHHH
T ss_pred             CceEEEc-------CCCChhHHHHHHHHHHcCCCCeEEeCCcc-cCcHHHHHHC----CCCCCCEEEECCEEEecHHHHH
Confidence            4588993       34688876 89999999999999998752 2234554432    2358999999999999888887


Q ss_pred             HHH
Q 045109          331 RMH  333 (423)
Q Consensus       331 ~Lh  333 (423)
                      +..
T Consensus        77 ~yL   79 (213)
T 1yy7_A           77 EYL   79 (213)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            743

>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A

Probab=92.65  E-value=0.62  Score=35.43  Aligned_cols=60  Identities=12%  Similarity=0.107  Sum_probs=39.4

Q ss_pred             CCCcEEEEEeCCCCCCCCCCcHHH-HH----HHHHhCC--CcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CC
Q 045109          250 GKEKLVVYFTSLRGIRKTYEDCCH-VR----VILKGLG--VRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GK  320 (423)
Q Consensus       250 ~~~kVVIYtTSLrGIRKT~c~Cc~-VK----~LL~~~g--V~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dG  320 (423)
                      ....++||++      .++|+.|. +.    ++.+.++  +.+..+|++.+.    ++.+.++    ...+|.+++  +|
T Consensus        18 ~~~~~lv~f~------~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~----v~~~Pt~~~~~~G   83 (106)
T 3die_A           18 ESGVQLVDFW------ATACGPCKMIAPVLEELAADYEGKADILKLDVDENP----STAAKYE----VMSIPTLIVFKDG   83 (106)
T ss_dssp             CSSEEEEEEE------CSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH----HHHHHTT----CCSBSEEEEEETT
T ss_pred             cCCcEEEEEE------CCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCH----HHHHhCC----CcccCEEEEEeCC
Confidence            6677777765      47899887 34    4444444  778888886553    4455554    357899877  88


Q ss_pred             EEE
Q 045109          321 KYI  323 (423)
Q Consensus       321 e~I  323 (423)
                      +.+
T Consensus        84 ~~~   86 (106)
T 3die_A           84 QPV   86 (106)
T ss_dssp             EEE
T ss_pred             eEE
Confidence            654

>3lyp_A Stringent starvation protein A; structural genomics, GST-superfamily, SSPA, stringent starva protein A homolog, PSI-2; 1.60A {Pseudomonas fluorescens} PDB: 3mdk_A

Probab=92.63  E-value=0.19  Score=44.15  Aligned_cols=69  Identities=19%  Similarity=0.246  Sum_probs=50.0

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRR  331 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~  331 (423)
                      ++.||       .-..|++|. |+-+|+..||.|+.+.++.. ....++.+..    ...+||.+..+|..|.....|.+
T Consensus         8 ~~~Ly-------~~~~s~~~~~v~~~L~~~gi~~e~~~v~~~-~~~~~~~~~~----P~g~vP~L~~~g~~l~eS~aI~~   75 (215)
T 3lyp_A            8 RLACY-------SDPADHYSHRVRIVLAEKGVSAEIISVEAG-RQPPKLIEVN----PYGSLPTLVDRDLALWESTVVME   75 (215)
T ss_dssp             CCEEE-------ECTTCHHHHHHHHHHHHHTCCCEEEECC----CCHHHHHHC----TTCCSSEEECC-CEEESHHHHHH
T ss_pred             CeEEE-------eCCCCchHHHHHHHHHHCCCCcEEEecCcc-cccHHHHHHC----CCCCcCeEEECCEEeecHHHHHH
Confidence            78889       345688776 89999999999999998754 2234555442    23589999999999998888877


Q ss_pred             HH
Q 045109          332 MH  333 (423)
Q Consensus       332 Lh  333 (423)
                      ..
T Consensus        76 yL   77 (215)
T 3lyp_A           76 YL   77 (215)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1

Probab=92.62  E-value=0.066  Score=41.59  Aligned_cols=38  Identities=24%  Similarity=0.669  Sum_probs=30.8

Q ss_pred             ccccccCccceE-----------eCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCccc
Q 045109          357 GACEACGDVRFV-----------PCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLTR  417 (423)
Q Consensus       357 ~~C~~CGG~rfV-----------pC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLir  417 (423)
                      ..|..|.|.+.+           +|+.|+|+-+++.                       .+|+.|+-.|.++
T Consensus        29 ~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~-----------------------~~C~~C~G~G~~~   77 (79)
T 1exk_A           29 QTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIK-----------------------DPCNKCHGHGRVE   77 (79)
T ss_dssp             EECTTTTTSSEEEEEETTEEEEEECTTTTTSSEECS-----------------------SBCGGGTTSSEEE
T ss_pred             CCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEECC-----------------------CcCCCCCCeEEEe
Confidence            469999998864           8999999987642                       2699999998774

>4iel_A Glutathione S-transferase, N-terminal domain PROT; GST, glutathione S-transferase, enzyme function initiative, structural genomics; HET: GSH; 1.60A {Burkholderia ambifaria}

Probab=92.57  E-value=0.35  Score=43.07  Aligned_cols=75  Identities=12%  Similarity=-0.034  Sum_probs=51.2

Q ss_pred             hcCCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChh--hHHHHHHHHcCCCCCCCCCceEeCCEEEc
Q 045109          248 KCGKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSG--FKNELKELLGDGFSGGGLPRVFVGKKYIG  324 (423)
Q Consensus       248 li~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~--~reEL~~lLg~~tg~~TVPQVFVdGe~IG  324 (423)
                      ++-..-+.||       .-..|++|. |+-+|+..||.|+.+.++....  ...++.    ......+||.+.+||..|.
T Consensus        18 ~~m~~m~~Ly-------~~~~sp~~~~vr~~L~~~gi~ye~~~v~~~~~~~~~~~~~----~~~P~g~vP~L~~~g~~l~   86 (229)
T 4iel_A           18 LYFQSMLHIL-------GKIPSINVRKVLWLCTELNLPFEQEDWGAGFRTTNDPAYL----ALNPNGLVPVIKDDGFVLW   86 (229)
T ss_dssp             ----CCEEEE-------SCTTCHHHHHHHHHHHHHTCCEEEECCC-------CHHHH----TTCTTCCSCEEEETTEEEE
T ss_pred             ecccceEEEe-------cCCCCcchHHHHHHHHHCCCCcEEEEecCCcCCcCCHHHH----hcCCCCCCCEEEECCEEEE
Confidence            3335568899       456788775 8999999999999998875321  122332    2334568999999999999


Q ss_pred             chHHHHHHH
Q 045109          325 GAEEIRRMH  333 (423)
Q Consensus       325 GaDEV~~Lh  333 (423)
                      ....|.+..
T Consensus        87 eS~aI~~yL   95 (229)
T 4iel_A           87 ESNTIIRYL   95 (229)
T ss_dssp             CHHHHHHHH
T ss_pred             eHHHHHHHH
Confidence            988887743

>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}

Probab=92.55  E-value=0.55  Score=38.49  Aligned_cols=60  Identities=17%  Similarity=0.274  Sum_probs=38.0

Q ss_pred             CCCcEEEEEeCCCCCCCCCCcHHH-HHH----HHHhC--CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CC
Q 045109          250 GKEKLVVYFTSLRGIRKTYEDCCH-VRV----ILKGL--GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GK  320 (423)
Q Consensus       250 ~~~kVVIYtTSLrGIRKT~c~Cc~-VK~----LL~~~--gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dG  320 (423)
                      ..++|||+++      .++|+.|. +..    +.+.+  +|.|..+|++.+.    ++.+.++    ...+|.++|  +|
T Consensus        49 ~~~~vvv~f~------~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~----~l~~~~~----v~~~Pt~~~~~~G  114 (140)
T 1v98_A           49 GAPLTLVDFF------APWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHP----GLAARYG----VRSVPTLVLFRRG  114 (140)
T ss_dssp             CCCEEEEEEE------CTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCH----HHHHHTT----CCSSSEEEEEETT
T ss_pred             cCCCEEEEEE------CCCCHHHHHHHHHHHHHHHHccCceEEEEEECCCCH----HHHHHCC----CCccCEEEEEeCC
Confidence            3444777764      47999886 343    44444  3778888886543    4444444    357999888  88


Q ss_pred             EEE
Q 045109          321 KYI  323 (423)
Q Consensus       321 e~I  323 (423)
                      +.+
T Consensus       115 ~~~  117 (140)
T 1v98_A          115 APV  117 (140)
T ss_dssp             EEE
T ss_pred             cEE
Confidence            753

>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A

Probab=92.48  E-value=0.3  Score=39.23  Aligned_cols=58  Identities=21%  Similarity=0.344  Sum_probs=37.4

Q ss_pred             CcEEEEEeCCCCCCCCCCcHHH-HHHHH----HhC-CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCEEE
Q 045109          252 EKLVVYFTSLRGIRKTYEDCCH-VRVIL----KGL-GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKKYI  323 (423)
Q Consensus       252 ~kVVIYtTSLrGIRKT~c~Cc~-VK~LL----~~~-gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe~I  323 (423)
                      ..||||++      .++|+.|. +...|    +.+ +|.|..+|++.+.    ++.+.++    ...+|.+++  +|+.+
T Consensus        31 k~vvv~F~------a~wC~~C~~~~p~l~~~~~~~~~v~~~~vd~~~~~----~l~~~~~----v~~~Pt~~~~~~G~~~   96 (114)
T 2oe3_A           31 DKLVIDFY------ATWCGPCKMMQPHLTKLIQAYPDVRFVKCDVDESP----DIAKECE----VTAMPTFVLGKDGQLI   96 (114)
T ss_dssp             SEEEEEEE------CTTCHHHHHTHHHHHHHHHHCTTSEEEEEETTTCH----HHHHHTT----CCSBSEEEEEETTEEE
T ss_pred             CEEEEEEE------CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCH----HHHHHCC----CCcccEEEEEeCCeEE
Confidence            45666654      47999887 34334    334 4888899987553    4555544    357898877  88753

>1aw9_A Glutathione S-transferase III; herbicide detoxification; 2.20A {Zea mays} SCOP: a.45.1.1 c.47.1.5

Probab=92.43  E-value=0.21  Score=43.54  Aligned_cols=70  Identities=16%  Similarity=0.216  Sum_probs=51.0

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChh--hHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSG--FKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEI  329 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~--~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV  329 (423)
                      ++.||       .-..|++|. |+-+|+..||.|+.+.+++...  ...++.+    .....+||.+..+|..|.....|
T Consensus         2 ~~~Ly-------~~~~sp~~~~v~~~L~~~gi~ye~~~v~~~~~~~~~~~~~~----~~P~g~vP~L~~~g~~l~eS~aI   70 (216)
T 1aw9_A            2 PLKLY-------GMPLSPNVVRVATVLNEKGLDFEIVPVDLTTGAHKQPDFLA----LNPFGQIPALVDGDEVLFESRAI   70 (216)
T ss_dssp             CEEEE-------SCTTCHHHHHHHHHHHHTTCCEEEECCCSSTTSSCCCSGGG----TCTTCCSCEEEETTEEEESHHHH
T ss_pred             ceEEE-------ecCCCccHHHHHHHHHHcCCccEEEecCccccccCCHHHHH----hCCCCCcCEEEECCEEeeCHHHH
Confidence            57889       446788876 8999999999999998875421  1112222    22345899999999999999888


Q ss_pred             HHHH
Q 045109          330 RRMH  333 (423)
Q Consensus       330 ~~Lh  333 (423)
                      .+..
T Consensus        71 ~~yL   74 (216)
T 1aw9_A           71 NRYI   74 (216)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7743

>3q18_A GSTO-2, glutathione S-transferase omega-2; glutathione transferase, dehydroascorbate reductase, reductase; 1.70A {Homo sapiens} PDB: 3q19_A* 3qag_A*

Probab=92.38  E-value=0.27  Score=43.97  Aligned_cols=72  Identities=13%  Similarity=0.156  Sum_probs=53.3

Q ss_pred             cCCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe-CCEEEcch
Q 045109          249 CGKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV-GKKYIGGA  326 (423)
Q Consensus       249 i~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV-dGe~IGGa  326 (423)
                      ...++++||       .-..|++|. |+-+|+..||.|+.+.|+... ..+++.+    .....+||.+-+ +|..|...
T Consensus        19 ~~~~~~~Ly-------~~~~sp~~~~v~~~L~~~gi~~e~~~v~~~~-~~~~~~~----~nP~g~vP~L~~~~g~~l~eS   86 (239)
T 3q18_A           19 VPEGLIRIY-------SMRFCPYSHRTRLVLKAKDIRHEVVNINLRN-KPEWYYT----KHPFGHIPVLETSQSQLIYES   86 (239)
T ss_dssp             CCTTCEEEE-------ECTTCHHHHHHHHHHHHTTCCEEEEEBCSSS-CCGGGGG----TSTTCCSCEEECTTCCEECSH
T ss_pred             CCCCeEEEE-------eCCCChHHHHHHHHHHHcCCCcEEEecCccc-CCHHHHh----cCCCCCCCEEEeCCCceeecH
Confidence            346789999       446798876 899999999999999987542 1112222    223468999999 99999888


Q ss_pred             HHHHHH
Q 045109          327 EEIRRM  332 (423)
Q Consensus       327 DEV~~L  332 (423)
                      ..|.+.
T Consensus        87 ~aI~~y   92 (239)
T 3q18_A           87 VIACEY   92 (239)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            888774

>3rbt_A Glutathione transferase O1; glutathione S-transferase omega3; 2.20A {Bombyx mori}

Probab=92.36  E-value=0.38  Score=43.51  Aligned_cols=70  Identities=13%  Similarity=0.166  Sum_probs=53.4

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe-CCE---EEcc
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV-GKK---YIGG  325 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV-dGe---~IGG  325 (423)
                      .+++.||       .-..|+++. |+-+|+..||.|+.+.|++.. ..+++.++.    ...+||.+.+ +|.   .|..
T Consensus        24 ~~~~~Ly-------~~~~sp~~~~v~~~L~~~gi~ye~~~v~~~~-~~~~~~~~n----P~g~vP~L~~~~g~~~~~l~e   91 (246)
T 3rbt_A           24 TDKLRLY-------HVDMNPYGHRVLLVLEAKRIKYEVYRLDPLR-LPEWFRAKN----PRLKIPVLEIPTDQGDRFLFE   91 (246)
T ss_dssp             CSSEEEE-------ECTTCHHHHHHHHHHHHTTBCEEEEECCSSS-CCHHHHHHC----TTCBSCEEEECCTTSCEEECC
T ss_pred             CCceEEE-------ecCCCccHHHHHHHHHHcCCCceEEEeCccc-CCHHHHHhC----CCCCCCEEEecCCCCceeeeC
Confidence            6788999       445788887 899999999999999987653 233455442    2358999999 888   8888


Q ss_pred             hHHHHHH
Q 045109          326 AEEIRRM  332 (423)
Q Consensus       326 aDEV~~L  332 (423)
                      ...|.+.
T Consensus        92 S~aI~~y   98 (246)
T 3rbt_A           92 SVVICDY   98 (246)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            8877764

>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A

Probab=92.28  E-value=0.96  Score=34.51  Aligned_cols=59  Identities=15%  Similarity=0.289  Sum_probs=37.8

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HH----HHHHhCC--CcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCE
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VR----VILKGLG--VRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKK  321 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK----~LL~~~g--V~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe  321 (423)
                      ...|+|+++      .++|+.|. +.    ++.+.++  +.+..+|++.+.    ++.+.++    ...+|.+++  +|+
T Consensus        17 ~~~~~v~f~------~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~----~~~~~~~----v~~~Pt~~~~~~G~   82 (105)
T 1nsw_A           17 DGPVLVDFW------AAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENP----ETTSQFG----IMSIPTLILFKGGR   82 (105)
T ss_dssp             SSCEEEEEE------CTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCH----HHHHHTT----CCSSSEEEEEETTE
T ss_pred             CCcEEEEEE------CCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCH----HHHHHcC----CccccEEEEEeCCe
Confidence            345666654      47999887 33    3444443  778888886543    4555544    357999988  887


Q ss_pred             EE
Q 045109          322 YI  323 (423)
Q Consensus       322 ~I  323 (423)
                      .+
T Consensus        83 ~~   84 (105)
T 1nsw_A           83 PV   84 (105)
T ss_dssp             EE
T ss_pred             EE
Confidence            43

>3qav_A RHO-class glutathione S-transferase; cytosol; 2.10A {Laternula elliptica} PDB: 3qaw_A*

Probab=92.23  E-value=0.48  Score=42.60  Aligned_cols=72  Identities=22%  Similarity=0.298  Sum_probs=52.5

Q ss_pred             CCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChh--hHHHHHHHHcCCCCCCCCCceEeCCEEEcch
Q 045109          250 GKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSG--FKNELKELLGDGFSGGGLPRVFVGKKYIGGA  326 (423)
Q Consensus       250 ~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~--~reEL~~lLg~~tg~~TVPQVFVdGe~IGGa  326 (423)
                      ...+++||+       -..|++|. |+-+|+..||.|+.+.|++...  ...++.+..    ...+||.+..+|..|...
T Consensus        23 ~~~~~~Ly~-------~~~sp~~~rv~~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~n----P~g~vPvL~~~g~~l~eS   91 (243)
T 3qav_A           23 TTSKPFVYW-------GSGSPPCWKVLLVLQEKKIDYDEKIISFSKKEHKSEEILELN----PRGQVPTFTDGDVVVNES   91 (243)
T ss_dssp             --CCCEEEE-------CTTCHHHHHHHHHHHHTTCCCEEEECCTTTTGGGSHHHHHHC----TTCCSCEEEETTEEECSH
T ss_pred             ccCccEEEe-------CCCCcchHHHHHHHHHcCCCceEEEecCcccccCCHHHHhhC----CCCCCCEEEECCEEEecH
Confidence            346788994       45688655 9999999999999998875432  234554432    235899999999999988


Q ss_pred             HHHHHH
Q 045109          327 EEIRRM  332 (423)
Q Consensus       327 DEV~~L  332 (423)
                      ..|.+.
T Consensus        92 ~aI~~Y   97 (243)
T 3qav_A           92 TAICMY   97 (243)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            888774

>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*

Probab=92.21  E-value=1.3  Score=35.29  Aligned_cols=60  Identities=15%  Similarity=0.197  Sum_probs=38.7

Q ss_pred             CCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHh----C-CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCE
Q 045109          250 GKEKLVVYFTSLRGIRKTYEDCCH-VRVILKG----L-GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKK  321 (423)
Q Consensus       250 ~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~----~-gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe  321 (423)
                      ....|+|+++      .++|+.|. +...|+.    + +|.+..+|++..    .++.+.++    ...+|.+++  +|+
T Consensus        30 ~~k~vlv~F~------a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~----~~l~~~~~----v~~~Pt~~~~~~G~   95 (116)
T 3qfa_C           30 GDKLVVVDFS------ATWCGPSKMIKPFFHSLSEKYSNVIFLEVDVDDC----QDVASECE----VKSMPTFQFFKKGQ   95 (116)
T ss_dssp             TTSCEEEEEE------CTTCHHHHHHHHHHHHHHTTCTTSEEEEEETTTT----HHHHHHTT----CCSSSEEEEESSSS
T ss_pred             CCCEEEEEEE------CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCC----HHHHHHcC----CccccEEEEEeCCe
Confidence            4566777664      47999887 4444443    2 477888888644    34555554    357998877  775


Q ss_pred             EE
Q 045109          322 YI  323 (423)
Q Consensus       322 ~I  323 (423)
                      .+
T Consensus        96 ~~   97 (116)
T 3qfa_C           96 KV   97 (116)
T ss_dssp             EE
T ss_pred             EE
Confidence            54

>1gnw_A Glutathione S-transferase; herbicide detoxification; HET: GTX; 2.20A {Arabidopsis thaliana} SCOP: a.45.1.1 c.47.1.5 PDB: 1bx9_A*

Probab=92.21  E-value=0.26  Score=42.67  Aligned_cols=69  Identities=13%  Similarity=0.130  Sum_probs=50.0

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChh--hHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSG--FKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEI  329 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~--~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV  329 (423)
                      ++.||       .-..|++|. |+-+|+..||.|+.+.+++...  ...++.+    .....+||.+..+|..|.....|
T Consensus         2 ~~~Ly-------~~~~sp~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~----~~P~g~vP~L~~~g~~l~eS~aI   70 (211)
T 1gnw_A            2 GIKVF-------GHPASIATRRVLIALHEKNLDFELVHVELKDGEHKKEPFLS----RNPFGQVPAFEDGDLKLFESRAI   70 (211)
T ss_dssp             CEEEE-------ECTTCHHHHHHHHHHHHTTCCCEEEECCGGGTGGGSTTGGG----TCTTCCSCEEEETTEEEECHHHH
T ss_pred             eeEEE-------eCCCCcchHHHHHHHHhcCCCcEEEEeccccccccCHHHHH----hCCCCCCCEEEECCEEEeCHHHH
Confidence            57788       345688776 8999999999999998875321  1122222    22345899999999999988888


Q ss_pred             HHH
Q 045109          330 RRM  332 (423)
Q Consensus       330 ~~L  332 (423)
                      .+.
T Consensus        71 ~~y   73 (211)
T 1gnw_A           71 TQY   73 (211)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            774

>3lyk_A Stringent starvation protein A homolog; structural genomics, GST-superfamily, SSPA, PSI-2, protein structure initiative; 2.10A {Haemophilus influenzae}

Probab=92.12  E-value=0.39  Score=42.25  Aligned_cols=68  Identities=18%  Similarity=0.354  Sum_probs=51.6

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRR  331 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~  331 (423)
                      .+.||       .-..|++|. |+-+|+..||.|+.+.|++. ....++.++.    ...+||.+..+|..|.....|.+
T Consensus         6 ~~~Ly-------~~~~sp~~~~v~~~L~~~gi~~e~~~v~~~-~~~~~~~~~~----P~g~vP~L~~~g~~l~eS~aI~~   73 (216)
T 3lyk_A            6 VMTLF-------SNKDDIYCHQVKIVLAEKGVLYENAEVDLQ-ALPEDLMELN----PYGTVPTLVDRDLVLFNSRIIME   73 (216)
T ss_dssp             CEEEE-------ECTTCHHHHHHHHHHHHHTCCCEEEECCTT-SCCHHHHHHC----TTCCSCEEEETTEEEESHHHHHH
T ss_pred             eEEEE-------eCCCChhHHHHHHHHHHcCCCcEEEeCCcc-cCcHHHHhhC----CCCCcCeEEECCeEecCHHHHHH
Confidence            47788       345688776 89999999999999998754 2234554442    23589999999999999888877


Q ss_pred             H
Q 045109          332 M  332 (423)
Q Consensus       332 L  332 (423)
                      .
T Consensus        74 y   74 (216)
T 3lyk_A           74 Y   74 (216)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2v6k_A Maleylpyruvate isomerase; glutathione-S-transferase, GST, plasmid, bacterial, biodegradation, fumaryl pyruvate; HET: TGG; 1.3A {Ralstonia SP} PDB: 2jl4_A*

Probab=92.07  E-value=0.34  Score=42.13  Aligned_cols=69  Identities=19%  Similarity=0.203  Sum_probs=50.4

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCCh--hhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHS--GFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEI  329 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~--~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV  329 (423)
                      ++.||+       -..|++|. |+-+|+..||.|+.+.++...  ....++.+..    ...+||.+..+|..|.....|
T Consensus         2 ~~~Ly~-------~~~s~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~----P~g~vP~L~~~g~~l~eS~aI   70 (214)
T 2v6k_A            2 KMKLYN-------FWRSGTSHRLRIALNLKGVPYEYLAVHLGKEEHLKDAFKALN----PQQLVPALDTGAQVLIQSPAI   70 (214)
T ss_dssp             CCEEEE-------CSSCHHHHHHHHHHHHHTCCCEEEECCTTTTGGGSHHHHHHC----TTCCSCEEECSSCEEECHHHH
T ss_pred             eeEEEe-------cCCCCcHHHHHHHHHHCCCCceEEecCCCcccccCHHHHhcC----CCCcCCEEEECCEEEecHHHH
Confidence            467883       34688886 899999999999999987543  1234554432    235899998888889888888


Q ss_pred             HHH
Q 045109          330 RRM  332 (423)
Q Consensus       330 ~~L  332 (423)
                      .+.
T Consensus        71 ~~y   73 (214)
T 2v6k_A           71 IEW   73 (214)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            774

>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C

Probab=92.06  E-value=1.5  Score=33.19  Aligned_cols=59  Identities=12%  Similarity=0.170  Sum_probs=37.1

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HH----HHHHhCC--CcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCE
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VR----VILKGLG--VRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKK  321 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK----~LL~~~g--V~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe  321 (423)
                      ...++||++      .++|+.|. +.    ++.+.++  +.+...|++.+.    ++.+.++    -..+|.+++  +|+
T Consensus        18 ~~~~~v~f~------~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~----v~~~Pt~~~~~~g~   83 (105)
T 1fb6_A           18 EVPVMVDFW------APWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAP----GIATQYN----IRSIPTVLFFKNGE   83 (105)
T ss_dssp             SSCEEEEEE------CTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH----HHHHHTT----CCSSSEEEEEETTE
T ss_pred             CCcEEEEEE------CCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchH----HHHHhCC----CCcccEEEEEeCCe
Confidence            445666664      47999886 33    3444454  777777876443    4555554    347899887  887


Q ss_pred             EE
Q 045109          322 YI  323 (423)
Q Consensus       322 ~I  323 (423)
                      .+
T Consensus        84 ~~   85 (105)
T 1fb6_A           84 RK   85 (105)
T ss_dssp             EE
T ss_pred             EE
Confidence            54

>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0

Probab=92.04  E-value=1.2  Score=34.31  Aligned_cols=60  Identities=15%  Similarity=0.241  Sum_probs=38.6

Q ss_pred             CCCcEEEEEeCCCCCCCCCCcHHH-HH----HHHHhCC--CcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CC
Q 045109          250 GKEKLVVYFTSLRGIRKTYEDCCH-VR----VILKGLG--VRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GK  320 (423)
Q Consensus       250 ~~~kVVIYtTSLrGIRKT~c~Cc~-VK----~LL~~~g--V~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dG  320 (423)
                      ....|+|+++      .++|+.|. +.    ++.+.++  +.+..+|++...    ++.+.++    -..+|.+++  +|
T Consensus        21 ~~~~vlv~f~------a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~----~l~~~~~----v~~~Pt~~~~~~g   86 (111)
T 3gnj_A           21 EGKACLVMFS------RKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEK----TLFQRFS----LKGVPQILYFKDG   86 (111)
T ss_dssp             SCCCEEEEEE------CSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCH----HHHHHTT----CCSSCEEEEEETT
T ss_pred             cCCEEEEEEe------CCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcCh----hHHHhcC----CCcCCEEEEEECC
Confidence            4466777664      47899886 34    3334443  788888887543    4555554    357998866  88


Q ss_pred             EEE
Q 045109          321 KYI  323 (423)
Q Consensus       321 e~I  323 (423)
                      +.+
T Consensus        87 ~~~   89 (111)
T 3gnj_A           87 EYK   89 (111)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            754

>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}

Probab=91.99  E-value=0.91  Score=34.37  Aligned_cols=59  Identities=17%  Similarity=0.256  Sum_probs=38.2

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HHH----HHHhC-CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCEE
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VRV----ILKGL-GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKKY  322 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK~----LL~~~-gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe~  322 (423)
                      ...|+|++.      .++|+.|. +..    +.+.+ ++.+..+|++.+.    ++.+.++    ...+|.+++  +|+.
T Consensus        19 ~~~~~v~f~------~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~----~~~~~~~----v~~~Pt~~~~~~g~~   84 (104)
T 2vim_A           19 GRLIVVDFF------AQWCGPCRNIAPKVEALAKEIPEVEFAKVDVDQNE----EAAAKYS----VTAMPTFVFIKDGKE   84 (104)
T ss_dssp             TSCEEEEEE------CTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCH----HHHHHTT----CCSSSEEEEEETTEE
T ss_pred             CCeEEEEEE------CCCCHHHHHhhHHHHHHHHHCCCCEEEEEeccCCH----HHHHHcC----CccccEEEEEeCCcE
Confidence            456777654      47899886 443    33444 6888888887543    4445444    347898877  8865


Q ss_pred             E
Q 045109          323 I  323 (423)
Q Consensus       323 I  323 (423)
                      +
T Consensus        85 ~   85 (104)
T 2vim_A           85 V   85 (104)
T ss_dssp             E
T ss_pred             E
Confidence            4

>1zl9_A GST class-sigma, glutathione S-transferase 5; glutathione transferase, C.elegans; HET: GSH; 2.01A {Caenorhabditis elegans}

Probab=91.92  E-value=0.39  Score=41.73  Aligned_cols=70  Identities=19%  Similarity=0.177  Sum_probs=51.2

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRR  331 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~  331 (423)
                      .+.||+.       ..+++|. |+-+|+..||.|+.+.++..  ...++.+.++.  ...+||.+-.||..|.....|.+
T Consensus         3 ~~~Ly~~-------~~s~~~~~v~~~L~~~gi~~e~~~v~~~--~~~~~~~~~~~--P~g~vP~L~~~g~~l~eS~aI~~   71 (207)
T 1zl9_A            3 SYKLTYF-------NGRGAGEVSRQIFAYAGQQYEDNRVTQE--QWPALKETCAA--PFGQLPFLEVDGKKLAQSHAIAR   71 (207)
T ss_dssp             CEEEEEE-------SSSGGGHHHHHHHHHHTCCCEEEEECTT--THHHHHHTTCS--TTSCSCEEEETTEEEECHHHHHH
T ss_pred             ceEEEEc-------CCCchHHHHHHHHHHcCCCceEEEecHH--HHHHHhhccCC--CCCCCCEEEECCEEEeeHHHHHH
Confidence            4678843       3477665 89999999999999998753  34555554222  24589999999999998888877


Q ss_pred             HH
Q 045109          332 MH  333 (423)
Q Consensus       332 Lh  333 (423)
                      ..
T Consensus        72 yL   73 (207)
T 1zl9_A           72 FL   73 (207)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>2r4v_A XAP121, chloride intracellular channel protein 2; chloride intracellular channels, CLIC2, pore-forming protein ryanodine receptor, chloride channel; HET: GSH; 1.85A {Homo sapiens} PDB: 2r5g_A 2per_A*

Probab=91.80  E-value=0.73  Score=41.82  Aligned_cols=78  Identities=19%  Similarity=0.235  Sum_probs=51.4

Q ss_pred             CCcEEEEEe-CCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHH
Q 045109          251 KEKLVVYFT-SLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEE  328 (423)
Q Consensus       251 ~~kVVIYtT-SLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDE  328 (423)
                      ...+.||.- +..|-....|++|. |+-+|+..||.|+.+.++.. ....++.++    ....+||.+..+|..|.....
T Consensus        11 ~~~i~ly~~~~~~~~~~~~sp~~~rv~~~L~~~gi~ye~~~v~~~-~~~~~~~~~----nP~g~vP~L~~~g~~l~ES~a   85 (247)
T 2r4v_A           11 DPEIELFVKAGSDGESIGNCPFCQRLFMILWLKGVKFNVTTVDMT-RKPEELKDL----APGTNPPFLVYNKELKTDFIK   85 (247)
T ss_dssp             CCCEEEEEEBCTTSSSBCSCHHHHHHHHHHHHHTCCCEEEEECCC---------------CCSSSCEEEETTEEECCHHH
T ss_pred             CCCEEEEEecCcccccCCCChhHHHHHHHHHHcCCCcEEEEcCcc-cchHHHHHh----CCCCCCCEEEECCEeccCHHH
Confidence            345888831 11232456799887 89999999999999988754 122334333    234589999999999999888


Q ss_pred             HHHHH
Q 045109          329 IRRMH  333 (423)
Q Consensus       329 V~~Lh  333 (423)
                      |.+..
T Consensus        86 I~~YL   90 (247)
T 2r4v_A           86 IEEFL   90 (247)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87743

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=91.78  E-value=0.12  Score=42.59  Aligned_cols=38  Identities=26%  Similarity=0.699  Sum_probs=30.8

Q ss_pred             ccccccCccceE-----------eCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCccc
Q 045109          357 GACEACGDVRFV-----------PCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLTR  417 (423)
Q Consensus       357 ~~C~~CGG~rfV-----------pC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLir  417 (423)
                      ..|..|.|.+.+           +|+.|+|+-+++.                       .+|+.|+-.|.++
T Consensus        46 ~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~i~-----------------------~~C~~C~G~G~v~   94 (104)
T 2ctt_A           46 QHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSIII-----------------------SPCVVCRGAGQAK   94 (104)
T ss_dssp             EECSSSSSSCEEEEEETTEEEEEECSSSSSSSEECS-----------------------SCCSSSSSCSEEC
T ss_pred             ccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceECC-----------------------CcCCCCCCeeEEE
Confidence            569999998754           8999999987652                       2699999998775

>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A

Probab=91.74  E-value=0.64  Score=36.20  Aligned_cols=59  Identities=14%  Similarity=0.264  Sum_probs=37.8

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HH----HHHHhC-CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCEE
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VR----VILKGL-GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKKY  322 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK----~LL~~~-gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe~  322 (423)
                      ...|+|+++      .++|+.|. +.    ++.+.+ ++.+..+|++.+.    ++.+.++    ...+|.+++  +|+.
T Consensus        28 ~~~~vv~f~------~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~----~~~~~~~----v~~~Pt~~~~~~g~~   93 (118)
T 2vm1_A           28 GKLVIIDFT------ASWCGPCRVIAPVFAEYAKKFPGAIFLKVDVDELK----DVAEAYN----VEAMPTFLFIKDGEK   93 (118)
T ss_dssp             TCCEEEEEE------CTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSH----HHHHHTT----CCSBSEEEEEETTEE
T ss_pred             CCEEEEEEE------CCCCHhHHHHhHHHHHHHHHCCCcEEEEEEcccCH----HHHHHcC----CCcCcEEEEEeCCeE
Confidence            445666654      47999886 33    344444 5888888886443    4445444    357999877  8875


Q ss_pred             E
Q 045109          323 I  323 (423)
Q Consensus       323 I  323 (423)
                      +
T Consensus        94 ~   94 (118)
T 2vm1_A           94 V   94 (118)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}

Probab=91.56  E-value=1.1  Score=34.80  Aligned_cols=60  Identities=18%  Similarity=0.394  Sum_probs=36.8

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HHHHH----Hh---CCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CC
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VRVIL----KG---LGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GK  320 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL----~~---~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dG  320 (423)
                      ...|+|+++      .++|+.|. +...|    +.   .++.+..+|++.+.    ++.+.++    ...+|.+++  +|
T Consensus        21 ~~~~~v~f~------a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~----~~~~~~~----v~~~Pt~~~~~~G   86 (112)
T 3d6i_A           21 DKLIVLYFH------TSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENS----EISELFE----ISAVPYFIIIHKG   86 (112)
T ss_dssp             TCCEEEEEE------CCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCH----HHHHHTT----CCSSSEEEEEETT
T ss_pred             CCEEEEEEE------CCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCH----HHHHHcC----CCcccEEEEEECC
Confidence            456777664      47998776 44333    33   35888888987553    4545444    357999877  89


Q ss_pred             EEEc
Q 045109          321 KYIG  324 (423)
Q Consensus       321 e~IG  324 (423)
                      +.++
T Consensus        87 ~~~~   90 (112)
T 3d6i_A           87 TILK   90 (112)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            7654

>2vo4_A 2,4-D inducible glutathione S-transferase; herbicide, TAU class GST, S-(P-nitrobenzyl- glutathione); HET: GTB 4NM; 1.75A {Glycine max} PDB: 3fhs_A*

Probab=91.50  E-value=0.66  Score=40.71  Aligned_cols=71  Identities=13%  Similarity=0.069  Sum_probs=51.0

Q ss_pred             CcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHH
Q 045109          252 EKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIR  330 (423)
Q Consensus       252 ~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~  330 (423)
                      .++.||+       -..|++|. |+-+|+..||.|+.+.++.. ....++.+...  . ..+||.+..+|..|.....|.
T Consensus         3 ~~~~Ly~-------~~~sp~~~~v~~~L~~~gi~~e~~~v~~~-~~~~~~~~~nP--~-~g~vP~L~~~g~~l~eS~aI~   71 (219)
T 2vo4_A            3 DEVVLLD-------FWPSPFGMRVRIALAEKGIKYEYKEEDLR-NKSPLLLQMNP--V-HKKIPVLIHNGKPICESLIAV   71 (219)
T ss_dssp             CCEEEEE-------CTTCHHHHHHHHHHHHTTCCCEEEECCTT-SCCHHHHHHCT--T-TCCSCEEEETTEEEESHHHHH
T ss_pred             CceEEEe-------ccCCchHHHHHHHHHHcCCCceEEecCcc-cCCHHHHHhCC--C-CCcCCEEEECCEeeehHHHHH
Confidence            4688883       34688877 89999999999999988753 22234433321  0 148999999999998888887


Q ss_pred             HHH
Q 045109          331 RMH  333 (423)
Q Consensus       331 ~Lh  333 (423)
                      +..
T Consensus        72 ~yL   74 (219)
T 2vo4_A           72 QYI   74 (219)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            743

>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1

Probab=91.47  E-value=0.53  Score=36.38  Aligned_cols=59  Identities=19%  Similarity=0.289  Sum_probs=37.5

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HH----HHHHhC-CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCEE
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VR----VILKGL-GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKKY  322 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK----~LL~~~-gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe~  322 (423)
                      ...|||+++      .++|+.|. +.    ++.+.+ +|.+..+|++.+.    ++.+.++    ...+|.+++  +|+.
T Consensus        26 ~~~~vv~f~------~~~C~~C~~~~~~l~~~~~~~~~v~~~~v~~~~~~----~~~~~~~----v~~~Pt~~~~~~G~~   91 (113)
T 1ti3_A           26 QKLIVVDFT------ASWCPPCKMIAPIFAELAKKFPNVTFLKVDVDELK----AVAEEWN----VEAMPTFIFLKDGKL   91 (113)
T ss_dssp             SSEEEEEEE------CSSCHHHHHHHHHHHHHHHHCSSEEEEEEETTTCH----HHHHHHH----CSSTTEEEEEETTEE
T ss_pred             CCeEEEEEE------CCCCHHHHHHHHHHHHHHHhCCCcEEEEEEccccH----HHHHhCC----CCcccEEEEEeCCEE
Confidence            445666654      47999887 34    444444 5777888886543    4555554    247898877  8875


Q ss_pred             E
Q 045109          323 I  323 (423)
Q Consensus       323 I  323 (423)
                      +
T Consensus        92 ~   92 (113)
T 1ti3_A           92 V   92 (113)
T ss_dssp             E
T ss_pred             E
Confidence            4

>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A

Probab=91.38  E-value=0.67  Score=36.47  Aligned_cols=60  Identities=10%  Similarity=0.183  Sum_probs=39.1

Q ss_pred             CCCcEEEEEeCCCCCCCCCCcHHH-HHH----HHHhC--CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CC
Q 045109          250 GKEKLVVYFTSLRGIRKTYEDCCH-VRV----ILKGL--GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GK  320 (423)
Q Consensus       250 ~~~kVVIYtTSLrGIRKT~c~Cc~-VK~----LL~~~--gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dG  320 (423)
                      ....|+|++.      .++|+.|. +..    +.+.+  +|.+..+|++.+.    ++.+.++    ...+|.+++  +|
T Consensus        16 ~~~~~lv~f~------a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~----~l~~~~~----v~~~Pt~~~~~~G   81 (112)
T 2voc_A           16 SEGVVLADFW------APWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQ----ETAGKYG----VMSIPTLLVLKDG   81 (112)
T ss_dssp             SSSEEEEEEE------CTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCC----SHHHHTT----CCSBSEEEEEETT
T ss_pred             CCCEEEEEEE------CCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCH----HHHHHcC----CCcccEEEEEeCC
Confidence            5556777764      47999876 333    33333  5888888887554    3444443    357999988  99


Q ss_pred             EEE
Q 045109          321 KYI  323 (423)
Q Consensus       321 e~I  323 (423)
                      +.+
T Consensus        82 ~~~   84 (112)
T 2voc_A           82 EVV   84 (112)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            754

>1oyj_A Glutathione S-transferase; herbicide detoxification; HET: GSH; 1.95A {Oryza sativa} SCOP: a.45.1.1 c.47.1.5

Probab=91.31  E-value=0.57  Score=41.68  Aligned_cols=70  Identities=11%  Similarity=0.099  Sum_probs=51.7

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCC-CCCCceEeCCEEEcchHH
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSG-GGLPRVFVGKKYIGGAEE  328 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~-~TVPQVFVdGe~IGGaDE  328 (423)
                      ..++.||+       -..|+++. |+-+|+..||.|+.+.+++. ....++.+..    .. .+||.+..+|..|.....
T Consensus         4 ~~~~~Ly~-------~~~sp~~~~v~~~L~~~gi~~e~~~v~~~-~~~~~~~~~n----P~~g~vP~L~~~g~~l~eS~a   71 (231)
T 1oyj_A            4 EKELVLLD-------FWVSPFGQRCRIAMAEKGLEFEYREEDLG-NKSDLLLRSN----PVHRKIPVLLHAGRPVSESLV   71 (231)
T ss_dssp             SCCEEEEE-------CTTCHHHHHHHHHHHHHTCCCEEEECCTT-SCCHHHHHHS----TTTCCSCEEEETTEEEESHHH
T ss_pred             CCceEEEe-------CCCChHHHHHHHHHHHCCCCCeEEecCcc-cCCHHHHhhC----CCCCCCCEEEECCEEEecHHH
Confidence            35688993       35688876 89999999999999988753 2233444432    12 489999999999988888


Q ss_pred             HHHH
Q 045109          329 IRRM  332 (423)
Q Consensus       329 V~~L  332 (423)
                      |.+.
T Consensus        72 I~~y   75 (231)
T 1oyj_A           72 ILQY   75 (231)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7774

>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A

Probab=91.30  E-value=0.67  Score=38.96  Aligned_cols=59  Identities=20%  Similarity=0.263  Sum_probs=39.3

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HHHHHH----hC-CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCEE
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VRVILK----GL-GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKKY  322 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~----~~-gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe~  322 (423)
                      ...|||+++      .++|+.|. +...|+    .+ +|.|..+|++.+.    ++.+.++    ...+|.+++  +|+.
T Consensus        32 ~~~vvv~F~------a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~~~~~----~l~~~~~----v~~~Pt~~~~~~G~~   97 (153)
T 2wz9_A           32 KSLLVVHFW------APWAPQCAQMNEVMAELAKELPQVSFVKLEAEGVP----EVSEKYE----ISSVPTFLFFKNSQK   97 (153)
T ss_dssp             TSCEEEEEE------CTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSH----HHHHHTT----CCSSSEEEEEETTEE
T ss_pred             CCeEEEEEE------CCCCHhHHHHHHHHHHHHHHcCCeEEEEEECCCCH----HHHHHcC----CCCCCEEEEEECCEE
Confidence            456666654      47999886 444443    33 6889999987543    4555554    357999988  9976


Q ss_pred             E
Q 045109          323 I  323 (423)
Q Consensus       323 I  323 (423)
                      +
T Consensus        98 ~   98 (153)
T 2wz9_A           98 I   98 (153)
T ss_dssp             E
T ss_pred             E
Confidence            4

>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1

Probab=91.19  E-value=1.2  Score=34.16  Aligned_cols=58  Identities=16%  Similarity=0.243  Sum_probs=36.9

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HH----HHHHhCC--CcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCE
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VR----VILKGLG--VRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKK  321 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK----~LL~~~g--V~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe  321 (423)
                      ...++|+++      .++|+.|. +.    ++.+.++  +.+..+|++.+.    ++.+.++    ...+|.+++  +|+
T Consensus        19 ~~~~lv~f~------~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~----v~~~Pt~~~~~~G~   84 (107)
T 1dby_A           19 SVPVLVDFW------APWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESP----NVASEYG----IRSIPTIMVFKGGK   84 (107)
T ss_dssp             SSCEEEEEE------CTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH----HHHHHHT----CCSSCEEEEESSSS
T ss_pred             CCcEEEEEE------CCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCH----HHHHHCC----CCcCCEEEEEeCCE
Confidence            345666654      47999886 33    4444453  778888876543    4555554    347899877  776


Q ss_pred             E
Q 045109          322 Y  322 (423)
Q Consensus       322 ~  322 (423)
                      .
T Consensus        85 ~   85 (107)
T 1dby_A           85 K   85 (107)
T ss_dssp             E
T ss_pred             E
Confidence            4

>2imi_A Epsilon-class glutathione S-transferase; HET: GSH; 1.40A {Anopheles gambiae} PDB: 2il3_A* 2imk_A*

Probab=91.16  E-value=0.55  Score=41.27  Aligned_cols=69  Identities=20%  Similarity=0.326  Sum_probs=50.5

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChh--hHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSG--FKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEI  329 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~--~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV  329 (423)
                      ++.||+       -..|++|. |+-+|+..||.|+.+.++....  ...++.+    .....+||.+..||..|.....|
T Consensus         3 ~~~Ly~-------~~~s~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~----~nP~g~vP~L~~~g~~l~eS~aI   71 (221)
T 2imi_A            3 NLVLYT-------LHLSPPCRAVELTAKALGLELEQKTINLLTGDHLKPEFVK----LNPQHTIPVLDDNGTIITESHAI   71 (221)
T ss_dssp             CEEEEE-------CTTCHHHHHHHHHHHHHTCCEEEEECCGGGTGGGSHHHHT----TCTTCCSCEEEETTEEEESHHHH
T ss_pred             ceEEee-------CCCCccHHHHHHHHHHcCCCceEEEccccccccCCHHHHh----hCcCCCCCEEEECCEEEeeHHHH
Confidence            477883       35688876 8999999999999999875321  1233333    23346899998899999988888


Q ss_pred             HHH
Q 045109          330 RRM  332 (423)
Q Consensus       330 ~~L  332 (423)
                      .+.
T Consensus        72 ~~y   74 (221)
T 2imi_A           72 MIY   74 (221)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            774

>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...

Probab=91.15  E-value=0.88  Score=34.91  Aligned_cols=59  Identities=14%  Similarity=0.265  Sum_probs=37.2

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HH----HHHHhCC--CcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCE
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VR----VILKGLG--VRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKK  321 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK----~LL~~~g--V~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe  321 (423)
                      ...|+|+++      .++|+.|. +.    ++.+.++  +.+..+|++.+.    ++.+.++    ...+|.+++  +|+
T Consensus        20 ~~~~~v~f~------~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~----v~~~Pt~~~~~~G~   85 (108)
T 2trx_A           20 DGAILVDFW------AEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP----GTAPKYG----IRGIPTLLLFKNGE   85 (108)
T ss_dssp             SSEEEEEEE------CTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCT----THHHHTT----CCSSSEEEEEETTE
T ss_pred             CCeEEEEEE------CCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCH----HHHHHcC----CcccCEEEEEeCCE
Confidence            345666654      47999886 33    3444443  777778876554    3444443    357999988  887


Q ss_pred             EE
Q 045109          322 YI  323 (423)
Q Consensus       322 ~I  323 (423)
                      .+
T Consensus        86 ~~   87 (108)
T 2trx_A           86 VA   87 (108)
T ss_dssp             EE
T ss_pred             EE
Confidence            53

>1gwc_A Glutathione S-transferase TSI-1; herbicide detoxification, plant, TAU class; HET: GTX; 2.25A {Aegilops tauschii} SCOP: a.45.1.1 c.47.1.5

Probab=91.12  E-value=0.66  Score=40.93  Aligned_cols=71  Identities=10%  Similarity=0.011  Sum_probs=51.3

Q ss_pred             CcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHH
Q 045109          252 EKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIR  330 (423)
Q Consensus       252 ~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~  330 (423)
                      .++.||+       -..|++|. |+-+|+..||.|+.+.++.. ....++.+. . .. ..+||.+..||..|.....|.
T Consensus         5 ~~~~Ly~-------~~~sp~~~~v~~~L~~~gi~~e~~~v~~~-~~~~~~~~~-n-P~-~g~vP~L~~~g~~l~eS~aI~   73 (230)
T 1gwc_A            5 DDLKLLG-------AWPSPFVTRVKLALALKGLSYEDVEEDLY-KKSELLLKS-N-PV-HKKIPVLIHNGAPVCESMIIL   73 (230)
T ss_dssp             CCEEEEE-------CTTCHHHHHHHHHHHHHTCCCEEEECCTT-SCCHHHHHH-S-TT-TCCSCEEEETTEEEESHHHHH
T ss_pred             CcEEEEe-------CCCChHHHHHHHHHHHcCCCCeEEecccc-cCCHHHHhh-C-CC-CCccCEEEECCEEeecHHHHH
Confidence            5788993       45688886 89999999999999988753 122344332 2 10 148999999999998888887


Q ss_pred             HHH
Q 045109          331 RMH  333 (423)
Q Consensus       331 ~Lh  333 (423)
                      +..
T Consensus        74 ~yL   76 (230)
T 1gwc_A           74 QYI   76 (230)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            743

>3n5o_A Glutathione transferase; seattle structural genomics center for infectious disease, S GST, pathogenic fungus, coccidioidomycosis; HET: GSH; 1.85A {Coccidioides immitis} PDB: 3lg6_A*

Probab=91.06  E-value=0.64  Score=41.17  Aligned_cols=70  Identities=13%  Similarity=0.201  Sum_probs=52.5

Q ss_pred             CcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCCh--hhHHHHHHHHcCCCCCCCCCceEeCC--------
Q 045109          252 EKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHS--GFKNELKELLGDGFSGGGLPRVFVGK--------  320 (423)
Q Consensus       252 ~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~--~~reEL~~lLg~~tg~~TVPQVFVdG--------  320 (423)
                      .++.||       .-..|+++. |+-+|+..||.|+.+.|++..  ....++.++.    ...+||.|.++|        
T Consensus         8 ~~~~Ly-------~~~~s~~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~~n----P~g~vP~L~~~~g~~~~~~~   76 (235)
T 3n5o_A            8 PNFELY-------GYFRSSCSGRLRIAFHLKSIPYTRHPVNLLKGEQHSDTYKSLN----PTNTVPLLVVSNINNTVSPS   76 (235)
T ss_dssp             CEEEEE-------ECTTCHHHHHHHHHHHHTTCCCEEEECCGGGTGGGSHHHHHHC----TTCCSCEEEEESSCCSSSTT
T ss_pred             CCeEEE-------ecCCCcHHHHHHHHHHHcCCccEEEecccccccccCHHHHhcC----CCCCCCEEEeCCCccccccc
Confidence            578999       345788877 899999999999999987532  1234555442    235899999988        


Q ss_pred             ---EEEcchHHHHHH
Q 045109          321 ---KYIGGAEEIRRM  332 (423)
Q Consensus       321 ---e~IGGaDEV~~L  332 (423)
                         ..|.....|.+.
T Consensus        77 ~~~~~l~eS~aI~~y   91 (235)
T 3n5o_A           77 SASFSIGQSLAALEY   91 (235)
T ss_dssp             CSEEEECSHHHHHHH
T ss_pred             cCceeehhHHHHHHH
Confidence               899888887764

>2c3n_A Glutathione S-transferase theta 1; glutathione transferase, polymorphism; 1.5A {Homo sapiens} PDB: 2c3q_A* 2c3t_A

Probab=91.01  E-value=0.68  Score=41.92  Aligned_cols=70  Identities=14%  Similarity=0.183  Sum_probs=52.0

Q ss_pred             CcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChh--hHHHHHHHHcCCCCCCCCCceEeCCEEEcchHH
Q 045109          252 EKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSG--FKNELKELLGDGFSGGGLPRVFVGKKYIGGAEE  328 (423)
Q Consensus       252 ~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~--~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDE  328 (423)
                      -+|++|       ....|++|. |+-+|+..||.|+.+.++....  ...++.++.    ...+||.+-.||..|.....
T Consensus         8 ~~~~ly-------~~~~sp~~rkv~~~L~e~gi~ye~~~v~~~~~~~~~~~~~~~n----P~gkVPvL~d~g~~l~ES~a   76 (247)
T 2c3n_A            8 MGLELY-------LDLLSQPCRAVYIFAKKNDIPFELRIVDLIKGQHLSDAFAQVN----PLKKVPALKDGDFTLTESVA   76 (247)
T ss_dssp             -CEEEE-------ECTTSHHHHHHHHHHHHTTCCCEEEECCGGGTGGGSHHHHHHC----TTCCSCEEEETTEEEECHHH
T ss_pred             cceEEe-------ecCCChhHHHHHHHHHHcCCCceEEEeccccCCcCCHHHHhhC----CCCcCcEEEECCEEEEcHHH
Confidence            468899       556799886 8999999999999998875321  234454432    23589999999999988888


Q ss_pred             HHHH
Q 045109          329 IRRM  332 (423)
Q Consensus       329 V~~L  332 (423)
                      |.+.
T Consensus        77 I~~Y   80 (247)
T 2c3n_A           77 ILLY   80 (247)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7774

>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1

Probab=91.01  E-value=0.65  Score=37.74  Aligned_cols=59  Identities=20%  Similarity=0.237  Sum_probs=37.7

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HHH----HHHhC-CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCEE
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VRV----ILKGL-GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKKY  322 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK~----LL~~~-gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe~  322 (423)
                      ...||||++      .++|+.|. +..    +.+.+ +|.+..+|++.+    .++.+.++    ...+|.++|  +|+.
T Consensus        38 ~k~vvv~f~------a~wC~~C~~~~~~l~~l~~~~~~v~~~~vd~d~~----~~l~~~~~----v~~~Pt~~~~~~G~~  103 (124)
T 1xfl_A           38 KTLVVVDFT------ASWCGPCRFIAPFFADLAKKLPNVLFLKVDTDEL----KSVASDWA----IQAMPTFMFLKEGKI  103 (124)
T ss_dssp             TCEEEEEEE------CTTCHHHHHHHHHHHHHHHHCSSEEEEEEETTTS----HHHHHHTT----CCSSSEEEEEETTEE
T ss_pred             CCEEEEEEE------CCCCHHHHHHHHHHHHHHHHCCCcEEEEEECccC----HHHHHHcC----CCccCEEEEEECCEE
Confidence            455677664      47999886 333    44444 577777887644    24555554    357899887  8875


Q ss_pred             E
Q 045109          323 I  323 (423)
Q Consensus       323 I  323 (423)
                      +
T Consensus       104 ~  104 (124)
T 1xfl_A          104 L  104 (124)
T ss_dssp             E
T ss_pred             E
Confidence            4

>1pn9_A GST class-delta, glutathione S-transferase 1-6; protein inhibitor complex; HET: GTX; 2.00A {Anopheles gambiae} SCOP: a.45.1.1 c.47.1.5

Probab=91.01  E-value=0.68  Score=40.32  Aligned_cols=64  Identities=16%  Similarity=0.191  Sum_probs=47.0

Q ss_pred             CCCCcHHH-HHHHHHhCCCcEEEEECCCChh--hHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHHHH
Q 045109          266 KTYEDCCH-VRVILKGLGVRVDERDLSMHSG--FKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRMH  333 (423)
Q Consensus       266 KT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~--~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~Lh  333 (423)
                      -..|++|. |+-+|+..||.|+.+.+++...  ...++.+..    ...+||.+-.||..|.....|.+..
T Consensus         6 ~~~sp~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~----P~g~vP~L~~~g~~l~eS~aI~~yL   72 (209)
T 1pn9_A            6 LPGSAPCRAVQMTAAAVGVELNLKLTDLMKGEHMKPEFLKLN----PQHCIPTLVDNGFALWESRAIQIYL   72 (209)
T ss_dssp             CTTCHHHHHHHHHHHHTTCCCEEEECCGGGTGGGSHHHHHHC----TTCCSSEEEETTEEEESHHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHcCCCcEEEEecccCCCcCCHHHHhhC----CCCCCCEEEECCEEEEeHHHHHHHH
Confidence            34688776 8999999999999998875321  224554432    2358999999999999988887743

>3niv_A Glutathione S-transferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.30A {Legionella pneumophila subsp}

Probab=90.92  E-value=0.4  Score=42.09  Aligned_cols=64  Identities=11%  Similarity=0.169  Sum_probs=42.0

Q ss_pred             CCCCcHHH-HHHHHHhCCCcEEEEECCCCh--h--hHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHHHH
Q 045109          266 KTYEDCCH-VRVILKGLGVRVDERDLSMHS--G--FKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRMH  333 (423)
Q Consensus       266 KT~c~Cc~-VK~LL~~~gV~yeErDVsmd~--~--~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~Lh  333 (423)
                      -..|+++. |+-+|+..||.|+.+.+++..  .  ...++.+.    ....+||.|..+|..|.....|.+..
T Consensus         8 ~~~s~~~~~v~~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~~~----~P~g~vP~L~~~g~~l~eS~aI~~yL   76 (222)
T 3niv_A            8 YFRSTACYRVRIALNLKKIAYEKIEVHLVNNGGEQHSLQYHQI----NPQELVPSLDINGQILSQSMAIIDYL   76 (222)
T ss_dssp             CTTCHHHHHHHHHHHHTTCCCCEEECCC-----------------------CCSEEEETTEEEECHHHHHHHH
T ss_pred             CCCCcHHHHHHHHHHHcCCCcEEEEeccccccccccCHHHHhc----CCCCCcCEEEECCEEeecHHHHHHHH
Confidence            35688776 899999999999999887543  1  12333332    23458999999999999888887743

>3bby_A Uncharacterized GST-like protein YFCF; NP_416804.1, glutathione S-transferase, N-terminal domain, S genomics; 1.85A {Escherichia coli}

Probab=90.86  E-value=0.45  Score=41.54  Aligned_cols=72  Identities=10%  Similarity=0.188  Sum_probs=46.0

Q ss_pred             CcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChh--hHHHHHHHHcCCCCCCCCCceEeCCEEEcchHH
Q 045109          252 EKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSG--FKNELKELLGDGFSGGGLPRVFVGKKYIGGAEE  328 (423)
Q Consensus       252 ~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~--~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDE  328 (423)
                      .+++||+..     ...|+++. |+-+|+..||.|+.+.|+....  ...++.++    ....+||.+..+|..|.....
T Consensus         5 ~~~~Ly~~~-----~~~s~~~~~v~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~----nP~g~vP~L~~~g~~l~eS~a   75 (215)
T 3bby_A            5 PAITLWSDA-----HFFSPYVLSAWVALQEKGLSFHIKTIDLDSGEHLQPTWQGY----GQTRRVPLLQIDDFELSESSA   75 (215)
T ss_dssp             CCEEEEEET-----TSCCHHHHHHHHHHHHHTCCCEEEEEC----------------------CCCEEEETTEEEESHHH
T ss_pred             CCEEEEecC-----CCCCcHHHHHHHHHHHcCCCCEEEEecCccccccCHHHHhh----CCCCCCCEEEeCCeEeecHHH
Confidence            467888431     13688877 8999999999999998875321  12233332    223589999999999998888


Q ss_pred             HHHH
Q 045109          329 IRRM  332 (423)
Q Consensus       329 V~~L  332 (423)
                      |.+.
T Consensus        76 I~~y   79 (215)
T 3bby_A           76 IAEY   79 (215)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8774

>2a2r_A Glutathione S-transferase P; detoxification, nitric oxide carrier, S- nitrosoglutathione; HET: MES GSN; 1.40A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 11gs_A* 12gs_A* 14gs_A* 16gs_A* 18gs_A* 21gs_A* 13gs_A* 2a2s_A* 3dd3_A* 3dgq_A* 3n9j_A* 3pgt_A* 1pgt_A* 2pgt_A* 4pgt_A* 22gs_A* 17gs_A* 3gus_A* 10gs_A* 1aqv_A* ...

Probab=90.82  E-value=0.57  Score=40.88  Aligned_cols=70  Identities=20%  Similarity=0.233  Sum_probs=49.5

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRR  331 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~  331 (423)
                      ++.||+       -..|+++. |+-+|+..||.|+.+.++.......++.+..    ...+||.+-.+|..|.....|.+
T Consensus         3 ~~~Ly~-------~~~s~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~----P~g~vP~L~~~g~~l~eS~aI~~   71 (210)
T 2a2r_A            3 PYTVVY-------FPVRGRCAALRMLLADQGQSWKEEVVTVETWQEGSLKASC----LYGQLPKFQDGDLTLYQSNTILR   71 (210)
T ss_dssp             SEEEEE-------CSSSGGGHHHHHHHHHTTCCEEEEECCHHHHHHSHHHHHS----TTSCSCEEEETTEEEECHHHHHH
T ss_pred             ceEEEE-------eCCcchHHHHHHHHHHcCCCceEEEecHHhhchhhccCCC----CCCCCCEEEECCEEEeeHHHHHH
Confidence            467883       34577765 8999999999999999874311122444432    23589999999999988887777


Q ss_pred             HH
Q 045109          332 MH  333 (423)
Q Consensus       332 Lh  333 (423)
                      ..
T Consensus        72 yL   73 (210)
T 2a2r_A           72 HL   73 (210)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>1v2a_A Glutathione transferase GST1-6; glutathione S-transferase, detoxification, xenobiotics; HET: GTS; 2.15A {Anopheles dirus} SCOP: a.45.1.1 c.47.1.5

Probab=90.79  E-value=0.79  Score=39.83  Aligned_cols=63  Identities=14%  Similarity=0.220  Sum_probs=46.6

Q ss_pred             CCCCcHHH-HHHHHHhCCCcEEEEECCCCh-hhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHHH
Q 045109          266 KTYEDCCH-VRVILKGLGVRVDERDLSMHS-GFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRM  332 (423)
Q Consensus       266 KT~c~Cc~-VK~LL~~~gV~yeErDVsmd~-~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~L  332 (423)
                      -..|++|. |+-+|+..||.|+.+.++... +...++.+..    ...+||.+-.||..|.....|.+.
T Consensus         6 ~~~s~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~n----P~g~vP~L~~~g~~l~eS~aI~~y   70 (210)
T 1v2a_A            6 SLISPPCQSAILLAKKLGITLNLKKTNVHDPVERDALTKLN----PQHTIPTLVDNGHVVWESYAIVLY   70 (210)
T ss_dssp             CTTCHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC----TTCCSCEEEETTEEEESHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHcCCCcEEEECCcccchhhHHHHHhC----CCCCcCeEEECCEEEEcHHHHHHH
Confidence            34688765 899999999999999987542 2234444432    235899999999999988888774

>1okt_A Glutathione S-transferase; GST; 1.9A {Plasmodium falciparum} SCOP: a.45.1.1 c.47.1.5 PDB: 1pa3_A 1q4j_A* 3fr9_A* 3frc_A* 2aaw_A* 3fr6_A 3fr3_A*

Probab=90.78  E-value=0.39  Score=41.95  Aligned_cols=74  Identities=16%  Similarity=0.303  Sum_probs=50.9

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHH-HcCCCCCCCCCceEeCCEEEcchHHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKEL-LGDGFSGGGLPRVFVGKKYIGGAEEIR  330 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~l-Lg~~tg~~TVPQVFVdGe~IGGaDEV~  330 (423)
                      ++.||+.       ..|+++. |+-+|+..||.|+.+.+++..+...++.+. ........+||.+..+|..|.....|.
T Consensus         4 ~~~Ly~~-------~~s~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~~~~P~g~vP~L~~~g~~l~eS~aI~   76 (211)
T 1okt_A            4 NIVLYYF-------DARGKAELIRLIFAYLGIEYTDKRFGVNGDAFVEFKNFKKEKDTPFEQVPILQIGDLILAQSQAIV   76 (211)
T ss_dssp             CEEEEEE-------SSSTTTHHHHHHHHHHTCCCEEEEETSSSCHHHHHHHHHHHSCCSSSCSCEEEETTEEEECHHHHH
T ss_pred             ccEEEEE-------CCCchhHHHHHHHHHcCCCceeeeccCCHHHHHHHhhccccccCCCCCCCEEEECCEEeehHHHHH
Confidence            4678843       3477765 899999999999999886433333444431 000223458999999999999888887


Q ss_pred             HHH
Q 045109          331 RMH  333 (423)
Q Consensus       331 ~Lh  333 (423)
                      +..
T Consensus        77 ~yL   79 (211)
T 1okt_A           77 RYL   79 (211)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            743

>4hoj_A REGF protein; GST, glutathione S-transferase, enzyme function initiative, structural genomics, transferase; HET: GSH; 1.40A {Neisseria gonorrhoeae}

Probab=90.74  E-value=0.64  Score=40.64  Aligned_cols=67  Identities=13%  Similarity=0.239  Sum_probs=49.8

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHHH
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRM  332 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~L  332 (423)
                      +.||       .-..||++. |+-+|+.+||.|+.+.|+.... .+++.++ .   ...+||.+-.||..|.....|.+.
T Consensus         4 m~LY-------~~~~sP~~~rvr~~L~e~gi~~e~~~v~~~~~-~~~~~~~-n---P~g~vPvL~~~~~~l~ES~aI~~y   71 (210)
T 4hoj_A            4 MTLY-------SGITCPFSHRCRFVLYEKGMDFEIKDIDIYNK-PEDLAVM-N---PYNQVPVLVERDLVLHESNIINEY   71 (210)
T ss_dssp             CEEE-------ECTTCHHHHHHHHHHHHHTCCCEEEECCTTSC-CHHHHHH-C---TTCCSCEEEETTEEEESHHHHHHH
T ss_pred             EEEe-------cCCCChHHHHHHHHHHHcCCCCEEEEeCCCCC-CHHHHHH-C---CCCCCcEEEECCEEEeccHHHHHH
Confidence            4688       346799887 9999999999999998875321 2344443 2   235899999999999888877764

>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}

Probab=90.74  E-value=2.1  Score=34.28  Aligned_cols=59  Identities=17%  Similarity=0.286  Sum_probs=37.5

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HHHHHH----hC---CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CC
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VRVILK----GL---GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GK  320 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~----~~---gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dG  320 (423)
                      ...|+||++      .++|+.|. +...|+    .+   +|.+..+|++.+.    ++.+.++    ...+|.+++  +|
T Consensus        33 ~k~vvv~f~------a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~----~~~~~~~----v~~~Pt~~~~~~G   98 (121)
T 2j23_A           33 DKVVVIDFW------ATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQS----QIAQEVG----IRAMPTFVFFKNG   98 (121)
T ss_dssp             SSCEEEEEE------CTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCH----HHHHHHT----CCSSSEEEEEETT
T ss_pred             CCEEEEEEE------CCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCH----HHHHHcC----CCcccEEEEEECC
Confidence            345777765      47899886 444444    22   2788888887543    4555554    347898877  88


Q ss_pred             EEE
Q 045109          321 KYI  323 (423)
Q Consensus       321 e~I  323 (423)
                      +.+
T Consensus        99 ~~~  101 (121)
T 2j23_A           99 QKI  101 (121)
T ss_dssp             EEE
T ss_pred             eEE
Confidence            753

>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1

Probab=90.72  E-value=1.8  Score=33.38  Aligned_cols=60  Identities=18%  Similarity=0.078  Sum_probs=38.0

Q ss_pred             CCCcEEEEEeCCCCCCCCCCcHHH-HHHHHH----hC-CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCE
Q 045109          250 GKEKLVVYFTSLRGIRKTYEDCCH-VRVILK----GL-GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKK  321 (423)
Q Consensus       250 ~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~----~~-gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe  321 (423)
                      ....|+|+++      .++|+.|. +...|+    .+ ++.+..+|++.+.    ++.+.++    -..+|.+++  +|+
T Consensus        20 ~~~~v~v~f~------a~wC~~C~~~~~~~~~~~~~~~~~~~~~vd~~~~~----~~~~~~~----v~~~Pt~~~~~~G~   85 (107)
T 1gh2_A           20 GSRLAVVKFT------MRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQ----GTAATNN----ISATPTFQFFRNKV   85 (107)
T ss_dssp             TTSCEEEEEE------CSSCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSH----HHHHHTT----CCSSSEEEEEETTE
T ss_pred             CCCEEEEEEE------CCCChhhHHHHHHHHHHHHHCCCcEEEEEECccCH----HHHHhcC----CCcccEEEEEECCe
Confidence            3456666654      47999886 444444    33 5888888987543    4555554    357897754  887


Q ss_pred             EE
Q 045109          322 YI  323 (423)
Q Consensus       322 ~I  323 (423)
                      .+
T Consensus        86 ~~   87 (107)
T 1gh2_A           86 RI   87 (107)
T ss_dssp             EE
T ss_pred             EE
Confidence            54

>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}

Probab=90.66  E-value=1.5  Score=34.91  Aligned_cols=61  Identities=10%  Similarity=0.090  Sum_probs=38.0

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HH----HHHHhC--CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe---CC
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VR----VILKGL--GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV---GK  320 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK----~LL~~~--gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV---dG  320 (423)
                      ...|+|+++      .++|+.|. +.    ++.+.+  +|.+..+|++.+.  ..++.+.++    ...+|.+++   +|
T Consensus        26 ~k~~lv~f~------a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~--~~~~~~~~~----v~~~Pt~~~~~~~G   93 (126)
T 2l57_A           26 GIPTIIMFK------TDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEK--NIDLAYKYD----ANIVPTTVFLDKEG   93 (126)
T ss_dssp             SSCEEEEEE------CSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSH--HHHHHHHTT----CCSSSEEEEECTTC
T ss_pred             CCcEEEEEE------CCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCc--hHHHHHHcC----CcceeEEEEECCCC
Confidence            445666654      47999886 33    344444  5778888832222  345666554    357999988   88


Q ss_pred             EEE
Q 045109          321 KYI  323 (423)
Q Consensus       321 e~I  323 (423)
                      +.+
T Consensus        94 ~~~   96 (126)
T 2l57_A           94 NKF   96 (126)
T ss_dssp             CEE
T ss_pred             CEE
Confidence            753

>2cvd_A Glutathione-requiring prostaglandin D synthase; glutathione-S-transferase, isomerase; HET: GSH HQL; 1.45A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 1iyi_A* 1v40_A* 1iyh_A* 3vi5_A* 3vi7_A* 2vcq_A* 2vcw_A* 2vcx_A* 2vcz_A* 2vd0_A* 2vd1_A* 3kxo_A* 3ee2_A* 1pd2_1*

Probab=90.58  E-value=0.57  Score=40.34  Aligned_cols=69  Identities=14%  Similarity=0.180  Sum_probs=50.5

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRR  331 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~  331 (423)
                      ++.||+.       ..|+++. |+-+|+..||.|+.+.++.  +...++.+    .....+||.+-.+|..|.....|.+
T Consensus         2 ~~~Ly~~-------~~s~~~~~v~~~L~~~gi~~e~~~v~~--~~~~~~~~----~~P~g~vP~L~~~g~~l~eS~aI~~   68 (198)
T 2cvd_A            2 NYKLTYF-------NMRGRAEIIRYIFAYLDIQYEDHRIEQ--ADWPEIKS----TLPFGKIPILEVDGLTLHQSLAIAR   68 (198)
T ss_dssp             CEEEEEE-------SSSGGGHHHHHHHHHTTCCCEEEEECG--GGHHHHHT----TSTTSCSCEEEETTEEEECHHHHHH
T ss_pred             CcEEEEc-------CCCchHHHHHHHHHHcCCCceEEEeCH--HHHHHhcc----CCCCCCCCEEEECCEEEecHHHHHH
Confidence            4677743       3477765 8999999999999998875  23344433    2334589999999999999888887


Q ss_pred             HHH
Q 045109          332 MHE  334 (423)
Q Consensus       332 LhE  334 (423)
                      ..+
T Consensus        69 yL~   71 (198)
T 2cvd_A           69 YLT   71 (198)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            543

>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1

Probab=90.45  E-value=0.98  Score=37.00  Aligned_cols=60  Identities=20%  Similarity=0.256  Sum_probs=39.0

Q ss_pred             CCCcEEEEEeCCCCCCCCCCcHHH-HH----HHHHhC-CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCE
Q 045109          250 GKEKLVVYFTSLRGIRKTYEDCCH-VR----VILKGL-GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKK  321 (423)
Q Consensus       250 ~~~kVVIYtTSLrGIRKT~c~Cc~-VK----~LL~~~-gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe  321 (423)
                      ....|||+++      .++|+.|. +.    ++.+.+ +|.|..+|++.+.    ++.+.++    ...+|.++|  +|+
T Consensus        36 ~~k~vvv~F~------a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~~----~l~~~~~----v~~~Pt~~i~~~G~  101 (125)
T 1r26_A           36 EDILTVAWFT------AVWCGPCKTIERPMEKIAYEFPTVKFAKVDADNNS----EIVSKCR----VLQLPTFIIARSGK  101 (125)
T ss_dssp             SSSCEEEEEE------CTTCHHHHHTHHHHHHHHHHCTTSEEEEEETTTCH----HHHHHTT----CCSSSEEEEEETTE
T ss_pred             cCCEEEEEEE------CCcCHhHHHHHHHHHHHHHHCCCCEEEEEECCCCH----HHHHHcC----CCcccEEEEEeCCe
Confidence            3455666664      47999886 33    333444 5888899987543    4555544    357999888  887


Q ss_pred             EE
Q 045109          322 YI  323 (423)
Q Consensus       322 ~I  323 (423)
                      .+
T Consensus       102 ~~  103 (125)
T 1r26_A          102 ML  103 (125)
T ss_dssp             EE
T ss_pred             EE
Confidence            54

>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A

Probab=90.44  E-value=3.1  Score=33.68  Aligned_cols=61  Identities=16%  Similarity=0.313  Sum_probs=38.5

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-H----HHHHHhCC--CcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe---CC
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-V----RVILKGLG--VRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV---GK  320 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-V----K~LL~~~g--V~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV---dG  320 (423)
                      ...||||++      .++|+.|. +    .++.+.++  |.+..+|++.+.    ++.+.++    -..+|.+++   +|
T Consensus        51 ~k~vlv~f~------a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~----v~~~Pt~~~~~~~g  116 (141)
T 3hxs_A           51 DKPAIVDFY------ADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEP----ELARDFG----IQSIPTIWFVPMKG  116 (141)
T ss_dssp             SSCEEEEEE------CTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCH----HHHHHTT----CCSSSEEEEECSSS
T ss_pred             CCEEEEEEE------CCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCH----HHHHHcC----CCCcCEEEEEeCCC
Confidence            456777765      47999886 3    44444554  777788886543    4555554    357898876   45


Q ss_pred             ---EEEcc
Q 045109          321 ---KYIGG  325 (423)
Q Consensus       321 ---e~IGG  325 (423)
                         ++.|.
T Consensus       117 ~~~~~~G~  124 (141)
T 3hxs_A          117 EPQVNMGA  124 (141)
T ss_dssp             CCEEEESC
T ss_pred             CEEEEeCC
Confidence               45565

>3lxz_A Glutathione S-transferase family protein; structural genomics, PP0183, PSI-2, protein structure initiative; 1.76A {Pseudomonas putida} PDB: 3pr8_A*

Probab=90.43  E-value=0.65  Score=40.93  Aligned_cols=67  Identities=16%  Similarity=0.195  Sum_probs=50.2

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHHH
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRM  332 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~L  332 (423)
                      +.||       .-..|+++. |+-+|+..||.|+.+.|..  ....++.+    .....+||.+.++|..|.....|.+.
T Consensus         3 ~~Ly-------~~~~sp~~~~v~~~L~~~gi~ye~~~v~~--~~~~~~~~----~~P~g~vP~L~~~~~~l~eS~aI~~y   69 (229)
T 3lxz_A            3 LKLY-------GFSVSNYYNMVKLALLEKGLTFEEVTFYG--GQAPQALE----VSPRGKVPVLETEHGFLSETSVILDY   69 (229)
T ss_dssp             EEEE-------ECTTCHHHHHHHHHHHHTTCCEEEEECCC--CSCHHHHT----TSTTSCSCEEEETTEEEESHHHHHHH
T ss_pred             EEEE-------eCCCCchHHHHHHHHHHcCCCCEEEecCC--CCCHHHHh----hCCCCCcCeEEeCCceeecHHHHHHH
Confidence            6788       346789875 8999999999999999853  22344433    23345899999999889888888774


Q ss_pred             H
Q 045109          333 H  333 (423)
Q Consensus       333 h  333 (423)
                      .
T Consensus        70 L   70 (229)
T 3lxz_A           70 I   70 (229)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}

Probab=90.38  E-value=0.97  Score=38.47  Aligned_cols=66  Identities=6%  Similarity=-0.066  Sum_probs=46.6

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HHHHHH----hCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCEEE
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VRVILK----GLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKKYI  323 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~----~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe~I  323 (423)
                      ..+|+||+.|      |+|+-|+ +...|+    .-.+.+..+||+..++.-.++.+.++-.   ...||+++  ||+-+
T Consensus        24 ~~~vvi~kha------twCgpc~~~~~~~e~~~~~~~v~~~~vdVde~r~~Sn~IA~~~~V~---h~sPq~il~k~G~~v   94 (112)
T 3iv4_A           24 NKYVFVLKHS------ETCPISANAYDQFNKFLYERDMDGYYLIVQQERDLSDYIAKKTNVK---HESPQAFYFVNGEMV   94 (112)
T ss_dssp             CSEEEEEEEC------TTCHHHHHHHHHHHHHHHHHTCCEEEEEGGGGHHHHHHHHHHHTCC---CCSSEEEEEETTEEE
T ss_pred             CCCEEEEEEC------CcCHhHHHHHHHHHHHhccCCceEEEEEeecCchhhHHHHHHhCCc---cCCCeEEEEECCEEE
Confidence            6778899765      7898776 444444    4479999999975555446788887632   25899875  88877


Q ss_pred             cc
Q 045109          324 GG  325 (423)
Q Consensus       324 GG  325 (423)
                      .-
T Consensus        95 ~~   96 (112)
T 3iv4_A           95 WN   96 (112)
T ss_dssp             EE
T ss_pred             EE
Confidence            64

>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A

Probab=90.33  E-value=1.6  Score=33.03  Aligned_cols=60  Identities=13%  Similarity=0.175  Sum_probs=37.7

Q ss_pred             CCCcEEEEEeCCCCCCCCCCcHHH-H----HHHHHhC--CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CC
Q 045109          250 GKEKLVVYFTSLRGIRKTYEDCCH-V----RVILKGL--GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GK  320 (423)
Q Consensus       250 ~~~kVVIYtTSLrGIRKT~c~Cc~-V----K~LL~~~--gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dG  320 (423)
                      ....++||++      .++|+.|. +    .++.+.+  ++.+...|++.+.    ++.+.++    ...+|.+++  +|
T Consensus        19 ~~~~~vv~f~------~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~----v~~~Pt~~~~~~G   84 (106)
T 1xwb_A           19 SGKLVVLDFF------ATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECE----DIAMEYN----ISSMPTFVFLKNG   84 (106)
T ss_dssp             TTSEEEEEEE------CTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCH----HHHHHTT----CCSSSEEEEEETT
T ss_pred             CCCEEEEEEE------CCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchH----HHHHHcC----CCcccEEEEEcCC
Confidence            3456666654      47899886 3    3444444  5777778876443    4545544    357898877  88


Q ss_pred             EEE
Q 045109          321 KYI  323 (423)
Q Consensus       321 e~I  323 (423)
                      +.+
T Consensus        85 ~~~   87 (106)
T 1xwb_A           85 VKV   87 (106)
T ss_dssp             EEE
T ss_pred             cEE
Confidence            754

>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0

Probab=90.30  E-value=1.3  Score=33.68  Aligned_cols=59  Identities=8%  Similarity=0.186  Sum_probs=37.0

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-H----HHHHHhCC--CcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceE--eCCE
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-V----RVILKGLG--VRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVF--VGKK  321 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-V----K~LL~~~g--V~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVF--VdGe  321 (423)
                      ...|+||++      .++|+.|. +    .++.+.++  +.+..+|++.+.    ++.+.++    ...+|.++  -+|+
T Consensus        21 ~~~~lv~f~------~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~----i~~~Pt~~~~~~g~   86 (109)
T 3tco_A           21 NKLVLVDCW------AEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQ----KIADKYS----VLNIPTTLIFVNGQ   86 (109)
T ss_dssp             SSEEEEEEE------CTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCH----HHHHHTT----CCSSSEEEEEETTE
T ss_pred             CCeEEEEEE------CCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCH----HHHHhcC----cccCCEEEEEcCCc
Confidence            455666654      47999887 3    34444554  778888886543    4445444    35799854  4886


Q ss_pred             EE
Q 045109          322 YI  323 (423)
Q Consensus       322 ~I  323 (423)
                      .+
T Consensus        87 ~~   88 (109)
T 3tco_A           87 LV   88 (109)
T ss_dssp             EE
T ss_pred             EE
Confidence            54

>3m3m_A Glutathione S-transferase; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics; HET: GSH; 1.75A {Pseudomonas fluorescens}

Probab=90.19  E-value=0.91  Score=39.34  Aligned_cols=72  Identities=13%  Similarity=0.212  Sum_probs=51.0

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCCh--hhHHHHHHHHcCCCCCCCCCceEe-CCEEEcchHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHS--GFKNELKELLGDGFSGGGLPRVFV-GKKYIGGAEE  328 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~--~~reEL~~lLg~~tg~~TVPQVFV-dGe~IGGaDE  328 (423)
                      .+.||       .-..|++|. |+-+|+..||.|+.+.++...  ....++.+    .....+||.+.+ +|..|.....
T Consensus         3 ~~~Ly-------~~~~s~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~----~~P~g~vP~L~~d~g~~l~eS~a   71 (210)
T 3m3m_A            3 LYKVY-------GDYRSGNCYKIKLMLNLLGLPYEWQAVDILGGDTQTEAFLA----KNPNGKIPVLELEDGTCLWESNA   71 (210)
T ss_dssp             CEEEE-------ECTTSHHHHHHHHHHHHTTCCEEEEECCTTTTTTSSHHHHT----TCTTCCSCEEEETTSCEEECHHH
T ss_pred             eEEEe-------CCCCCCcHHHHHHHHHHcCCCCEEEEecCCCccccCHHHHh----hCCCCCCCEEEecCCEEEecHHH
Confidence            36788       345688776 899999999999999987532  12234333    233468999996 8888888888


Q ss_pred             HHHHHHc
Q 045109          329 IRRMHEE  335 (423)
Q Consensus       329 V~~LhEs  335 (423)
                      |.+..+.
T Consensus        72 I~~yL~~   78 (210)
T 3m3m_A           72 ILNFLAD   78 (210)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHhc
Confidence            7775443

>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*

Probab=90.15  E-value=1.5  Score=34.56  Aligned_cols=59  Identities=15%  Similarity=0.253  Sum_probs=37.9

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HHHHH----HhC-CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCEE
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VRVIL----KGL-GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKKY  322 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL----~~~-gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe~  322 (423)
                      ...|+||++      .++|+.|. +...|    +.+ ++.+..+|++.+.    ++.+.++    ...+|.+++  +|+.
T Consensus        34 ~~~~vv~f~------~~~C~~C~~~~~~l~~~~~~~~~~~~~~vd~~~~~----~~~~~~~----v~~~Pt~~~~~~G~~   99 (122)
T 2vlu_A           34 KKLVVIDFT------ASWCGPCRIMAPVFADLAKKFPNAVFLKVDVDELK----PIAEQFS----VEAMPTFLFMKEGDV   99 (122)
T ss_dssp             TCCEEEEEE------CTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCH----HHHHHTT----CCSSSEEEEEETTEE
T ss_pred             CCEEEEEEE------CCCCHHHHHHHHHHHHHHHHCCCcEEEEEECCCCH----HHHHHcC----CCcccEEEEEeCCEE
Confidence            456666654      47999886 44344    344 4888888887543    4445544    357898877  8875


Q ss_pred             E
Q 045109          323 I  323 (423)
Q Consensus       323 I  323 (423)
                      +
T Consensus       100 ~  100 (122)
T 2vlu_A          100 K  100 (122)
T ss_dssp             E
T ss_pred             E
Confidence            4

>4dej_A Glutathione S-transferase related protein; transferase-like protein, transcription regulation; 2.90A {Idiomarina loihiensis}

Probab=90.14  E-value=0.67  Score=41.73  Aligned_cols=70  Identities=19%  Similarity=0.179  Sum_probs=52.3

Q ss_pred             CcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCC-CCCCceEeCCEEEcchHHH
Q 045109          252 EKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSG-GGLPRVFVGKKYIGGAEEI  329 (423)
Q Consensus       252 ~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~-~TVPQVFVdGe~IGGaDEV  329 (423)
                      ..+.||       .-..|+++. |+-+|+..||.|+.+.|+.. ....++.++-    .. .+||.+-.||..|.....|
T Consensus        11 ~~~~Ly-------~~~~sp~~~~vr~~L~~~gi~~e~~~v~~~-~~~~~~~~~n----P~~g~vPvL~~~g~~l~eS~aI   78 (231)
T 4dej_A           11 SVMTLY-------SGKDDLKSHQVRLVLAEKGVGVEITYVTDE-STPEDLLQLN----PYPEAKPTLVDRELVLYNAQII   78 (231)
T ss_dssp             SSCEEE-------ECSSCHHHHHHHHHHHHHTCBCEEEECCSS-CCCHHHHHHC----CSSSCCSEEEETTEEEESHHHH
T ss_pred             ceEEEE-------cCCCChHHHHHHHHHHHcCCCcEEEEcCcc-cCCHHHHHhC----CCCCCCCEEEECCEEEEcHHHH
Confidence            347788       345688876 89999999999999998754 2234555432    23 4899999999999988888


Q ss_pred             HHHH
Q 045109          330 RRMH  333 (423)
Q Consensus       330 ~~Lh  333 (423)
                      .+..
T Consensus        79 ~~YL   82 (231)
T 4dej_A           79 MEYL   82 (231)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7743

>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}

Probab=90.13  E-value=1.7  Score=33.63  Aligned_cols=59  Identities=14%  Similarity=0.249  Sum_probs=37.2

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-H----HHHHHhC--CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCE
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-V----RVILKGL--GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKK  321 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-V----K~LL~~~--gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe  321 (423)
                      ...|+|+++      .++|+.|. +    .++.+.+  ++.+..+|++.+.    ++.+.++    ...+|.+++  +|+
T Consensus        23 ~~~~vv~f~------~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~----v~~~Pt~~~~~~G~   88 (112)
T 1t00_A           23 DKPVLVDFW------AAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENP----GTAAKYG----VMSIPTLNVYQGGE   88 (112)
T ss_dssp             SSCEEEEEE------CTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH----HHHHHTT----CCSSSEEEEEETTE
T ss_pred             CCeEEEEEE------CCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCH----HHHHhCC----CCcccEEEEEeCCE
Confidence            345666654      47999886 3    3444445  4778888886543    4445544    357899877  886


Q ss_pred             EE
Q 045109          322 YI  323 (423)
Q Consensus       322 ~I  323 (423)
                      .+
T Consensus        89 ~~   90 (112)
T 1t00_A           89 VA   90 (112)
T ss_dssp             EE
T ss_pred             EE
Confidence            53

>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A

Probab=90.10  E-value=0.81  Score=35.09  Aligned_cols=59  Identities=17%  Similarity=0.318  Sum_probs=36.8

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HHHHHH----hC-----CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VRVILK----GL-----GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--  318 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~----~~-----gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--  318 (423)
                      ...++|+++      .++|+.|. +...|.    .+     +|.+..+|++.+.    ++.+.++    -..+|.+++  
T Consensus        21 ~~~~lv~f~------~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~----~l~~~~~----v~~~Pt~~~~~   86 (111)
T 3uvt_A           21 EGITFIKFY------APWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAER----NICSKYS----VRGYPTLLLFR   86 (111)
T ss_dssp             SSEEEEEEE------CSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCH----HHHHHTT----CCSSSEEEEEE
T ss_pred             CCcEEEEEE------CCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccH----hHHHhcC----CCcccEEEEEe
Confidence            556777665      47999887 444443    33     4667777776443    4555554    357998776  


Q ss_pred             CCEEE
Q 045109          319 GKKYI  323 (423)
Q Consensus       319 dGe~I  323 (423)
                      +|+.+
T Consensus        87 ~g~~~   91 (111)
T 3uvt_A           87 GGKKV   91 (111)
T ss_dssp             TTEEE
T ss_pred             CCcEE
Confidence            88554

>3ay8_A Glutathione S-transferase; GST fold, GST binding, cytosolic; 2.10A {Bombyx mori}

Probab=90.06  E-value=0.72  Score=40.39  Aligned_cols=70  Identities=9%  Similarity=0.108  Sum_probs=51.1

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCCh-h-hHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHS-G-FKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEI  329 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~-~-~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV  329 (423)
                      ++.||+       -..|+++. |+-+|+..||.|+.+.++... + ...++.+..    ...+||.+..+|..|.....|
T Consensus         3 ~~~Ly~-------~~~s~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~n----P~g~vP~L~~~g~~l~eS~aI   71 (216)
T 3ay8_A            3 SLKLYH-------FPVSGPSRGALLAARAIGIPIQIEIVNLFKKEQLQESFLKLN----PQHCVPTLDDNNFVLWESRAI   71 (216)
T ss_dssp             CCEEEE-------CTTCHHHHHHHHHHHHHTCCCEEEECCTTCGGGCCHHHHHHS----SSCCSSEEEETTEEEECHHHH
T ss_pred             ceEEec-------CCCCccHHHHHHHHHHcCCCceEEEeccccccccCHHHHhhC----CCCCCCeEEECCEEEEcHHHH
Confidence            356883       35688776 899999999999999987532 1 224554432    235899999999999988887


Q ss_pred             HHHH
Q 045109          330 RRMH  333 (423)
Q Consensus       330 ~~Lh  333 (423)
                      .+..
T Consensus        72 ~~yL   75 (216)
T 3ay8_A           72 ACYL   75 (216)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7743

>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A

Probab=89.97  E-value=3.4  Score=31.77  Aligned_cols=59  Identities=20%  Similarity=0.257  Sum_probs=37.7

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HH----HHHHhC--CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCE
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VR----VILKGL--GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKK  321 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK----~LL~~~--gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe  321 (423)
                      ...|+|+++      .++|+.|. +.    ++.+.+  ++.+..+|++.+    .++.+.++    ...+|.+++  +|+
T Consensus        24 ~~~~vv~f~------~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~----~~~~~~~~----v~~~Pt~~~~~~G~   89 (112)
T 1ep7_A           24 HKPIVVDFT------ATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAV----AAVAEAAG----ITAMPTFHVYKDGV   89 (112)
T ss_dssp             TCCEEEEEE------CTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTT----HHHHHHHT----CCBSSEEEEEETTE
T ss_pred             CCeEEEEEE------CCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCch----HHHHHHcC----CCcccEEEEEECCe
Confidence            445666654      47999886 33    344444  488888888644    34555554    347899877  887


Q ss_pred             EE
Q 045109          322 YI  323 (423)
Q Consensus       322 ~I  323 (423)
                      .+
T Consensus        90 ~~   91 (112)
T 1ep7_A           90 KA   91 (112)
T ss_dssp             EE
T ss_pred             EE
Confidence            54

>3m0f_A Uncharacterized protein GST_N; PSI-2, NYSGXRC, glutathione, structural genomics, protein structure initiative; HET: GSH; 1.60A {Pseudomonas fluorescens} PDB: 3lxt_A*

Probab=89.89  E-value=0.69  Score=40.18  Aligned_cols=63  Identities=19%  Similarity=0.188  Sum_probs=47.4

Q ss_pred             CCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceE-eCCEEEcchHHHHHH
Q 045109          265 RKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVF-VGKKYIGGAEEIRRM  332 (423)
Q Consensus       265 RKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVF-VdGe~IGGaDEV~~L  332 (423)
                      .-..|+++. |+-+|+..||.|+.+.++.... ..++.++..    ..+||.+. .||..|.....|.+.
T Consensus         7 ~~~~sp~~~~v~~~l~~~gi~~e~~~v~~~~~-~~~~~~~nP----~g~vP~L~~~~g~~l~eS~aI~~y   71 (213)
T 3m0f_A            7 GMLDSPYVRRVAISLKSLGLPFEHHSLSVFST-FEQFKAINP----VVKAPTLVCEGGEVLMDSSLIIDY   71 (213)
T ss_dssp             SCTTSHHHHHHHHHHHHHTCCCEEECCCTTTT-HHHHHHHCT----TCCSSEEECTTCCEEESHHHHHHH
T ss_pred             cCCCCCcHHHHHHHHHHCCCCcEEEEecCCCC-cHHHHhcCC----CCCcCeEEeCCCcEEEcHHHHHHH
Confidence            456788876 8999999999999999875433 455555422    34899998 688888888877764

>1r5a_A Glutathione transferase; glutathione S-transferase, GST, GSH, mosquito, detoxification, xenobiotics; HET: GTS; 2.50A {Anopheles cracens} SCOP: a.45.1.1 c.47.1.5

Probab=89.85  E-value=1.3  Score=38.72  Aligned_cols=68  Identities=21%  Similarity=0.234  Sum_probs=49.6

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChh-h-HHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHH
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSG-F-KNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIR  330 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~-~-reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~  330 (423)
                      +.||+       -..|+++. |+-+|+..||.|+.+.++.... . ..++.+    .....+||.+-.+|..|.....|.
T Consensus         3 ~~Ly~-------~~~sp~~~~v~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~----~nP~g~vP~L~~~g~~l~eS~aI~   71 (218)
T 1r5a_A            3 TVLYY-------LPASPPCRSVLLLAKMIGVELDLKVLNIMEGEQLKPDFVE----LNPQHCIPTMDDHGLVLWESRVIL   71 (218)
T ss_dssp             EEEEE-------CTTCHHHHHHHHHHHHTTCCEEEEECCTTTTGGGSHHHHT----TCTTCCSSEEEETTEEEECHHHHH
T ss_pred             EEEEe-------CCCChhHHHHHHHHHHcCCCCeEEecCcccccccCHHHHh----hCCCCCcCEEEECCEEEEcHHHHH
Confidence            67883       35688776 8999999999999999876432 1 234333    223458999999999998888877


Q ss_pred             HH
Q 045109          331 RM  332 (423)
Q Consensus       331 ~L  332 (423)
                      +.
T Consensus        72 ~y   73 (218)
T 1r5a_A           72 SY   73 (218)
T ss_dssp             HH
T ss_pred             HH
Confidence            74

>1yq1_A Glutathione S-transferase; nematoda, structural genomics, PSI, protein structure initiative; 3.00A {Caenorhabditis elegans}

Probab=89.82  E-value=0.42  Score=41.29  Aligned_cols=69  Identities=13%  Similarity=0.145  Sum_probs=49.4

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRR  331 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~  331 (423)
                      ++.||+.       ..|+++. |+-+|+..||.|+.+.++.. ....++.+.    ....+||.+-.||..|.....|.+
T Consensus         3 ~~~Ly~~-------~~s~~~~~vr~~L~~~gi~~e~~~v~~~-~~~~~~~~~----~P~g~vP~L~~~g~~l~eS~aI~~   70 (208)
T 1yq1_A            3 SYKLTYF-------FFRGLGEPIRLLFHLAGVQFEEVRMNPD-QTWLDIKDS----TPMKQLPVLNIDGFELPQSGAILR   70 (208)
T ss_dssp             CEEEEEE-------SSSTTTHHHHHHHHHHTCCCEEEEECTT-TCCHHHHHT----STTSCSCEEEESSCEECCHHHHHH
T ss_pred             ceEEEEe-------CCCCchHHHHHHHHHcCCCeEEEEeccc-chhhhhhcc----CCCCCCCEEEECCEEEeeHHHHHH
Confidence            4678843       3467665 89999999999999988741 223344432    234589999999999998888877


Q ss_pred             HH
Q 045109          332 MH  333 (423)
Q Consensus       332 Lh  333 (423)
                      ..
T Consensus        71 yL   72 (208)
T 1yq1_A           71 YL   72 (208)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}

Probab=89.81  E-value=1.3  Score=36.19  Aligned_cols=59  Identities=12%  Similarity=0.211  Sum_probs=36.6

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-H----HHHHHhC--CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCE
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-V----RVILKGL--GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKK  321 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-V----K~LL~~~--gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe  321 (423)
                      ...|+|+++      .++|+.|. +    .++.+.+  +|.+..+|++.+.+    +.+.+    +...+|.+++  +|+
T Consensus        40 ~k~vlv~F~------a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~~----l~~~~----~v~~~Pt~~~~~~G~  105 (128)
T 2o8v_B           40 DGAILVDFW------AEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPG----TAPKY----GIRGIPTLLLFKNGE  105 (128)
T ss_dssp             SSEEEEEEE------CSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCCT----TSGGG----TCCSSSEEEEEETTE
T ss_pred             CCEEEEEEE------CCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHH----HHHHc----CCCccCEEEEEeCCE
Confidence            445666654      47999886 3    3444444  37777888765432    22223    3457999988  897


Q ss_pred             EE
Q 045109          322 YI  323 (423)
Q Consensus       322 ~I  323 (423)
                      .+
T Consensus       106 ~~  107 (128)
T 2o8v_B          106 VA  107 (128)
T ss_dssp             EE
T ss_pred             EE
Confidence            54

>3ein_A GST class-theta, glutathione S-transferase 1-1; delta-class GST; HET: GSH; 1.13A {Drosophila melanogaster} PDB: 3mak_A* 3f6f_A 3gh6_A* 1jlv_A*

Probab=89.78  E-value=0.6  Score=40.45  Aligned_cols=63  Identities=17%  Similarity=0.240  Sum_probs=46.5

Q ss_pred             CCCCcHHH-HHHHHHhCCCcEEEEECCCChh--hHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHHH
Q 045109          266 KTYEDCCH-VRVILKGLGVRVDERDLSMHSG--FKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRM  332 (423)
Q Consensus       266 KT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~--~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~L  332 (423)
                      -..|+++. |+-+|+..||.|+.+.++....  ...++.+    .....+||.+..||..|.....|.+.
T Consensus         7 ~~~s~~~~~v~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~----~~P~g~vP~L~~~g~~l~eS~aI~~y   72 (209)
T 3ein_A            7 LPGSSPCRSVIMTAKAVGVELNKKLLNLQAGEHLKPEFLK----INPQHTIPTLVDNGFALWESRAIQVY   72 (209)
T ss_dssp             CTTCHHHHHHHHHHHHHTCCCEEEECCGGGTGGGSHHHHT----TCTTCCSCEEEETTEEEECHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHcCCCcEEEEcccccCCcCCHHHHh----cCCCCCCCEEEECCEEEEcHHHHHHH
Confidence            45688876 8999999999999998875432  1233332    23345899999999999988888764

>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1

Probab=89.69  E-value=1.9  Score=34.16  Aligned_cols=61  Identities=15%  Similarity=0.195  Sum_probs=38.6

Q ss_pred             CCCcEEEEEeCCCCCCCCCCcHHH-HHHHH----HhC-CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCE
Q 045109          250 GKEKLVVYFTSLRGIRKTYEDCCH-VRVIL----KGL-GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKK  321 (423)
Q Consensus       250 ~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL----~~~-gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe  321 (423)
                      ....|+|+++      .++|+.|. +...|    +.+ ++.+..+|++..   ..++.+.++    -..+|.++|  +|+
T Consensus        36 ~~~~~vv~f~------a~wC~~C~~~~~~l~~~~~~~~~~~~~~vd~~~~---~~~~~~~~~----v~~~Pt~~~~~~G~  102 (124)
T 1faa_A           36 GDKPVVLDMF------TQWCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQE---NKTLAKELG----IRVVPTFKILKENS  102 (124)
T ss_dssp             TTSCEEEEEE------CTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSST---THHHHHHHC----CSSSSEEEEEETTE
T ss_pred             CCCEEEEEEE------CCcCHhHHHHhHHHHHHHHHCCCCEEEEEecCcc---hHHHHHHcC----CCeeeEEEEEeCCc
Confidence            3456666654      47999887 44444    343 588888888521   235556665    347899777  887


Q ss_pred             EE
Q 045109          322 YI  323 (423)
Q Consensus       322 ~I  323 (423)
                      .+
T Consensus       103 ~~  104 (124)
T 1faa_A          103 VV  104 (124)
T ss_dssp             EE
T ss_pred             EE
Confidence            65

>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}

Probab=89.65  E-value=1.8  Score=35.52  Aligned_cols=66  Identities=11%  Similarity=-0.005  Sum_probs=41.0

Q ss_pred             hhcCCCcEEEEEeCCCCCCCCCCcHHH-H----HHHHHhCCCcEEEEECCCCh-----hhHHHHHHHHcCCCCCCCCCce
Q 045109          247 HKCGKEKLVVYFTSLRGIRKTYEDCCH-V----RVILKGLGVRVDERDLSMHS-----GFKNELKELLGDGFSGGGLPRV  316 (423)
Q Consensus       247 ~li~~~kVVIYtTSLrGIRKT~c~Cc~-V----K~LL~~~gV~yeErDVsmd~-----~~reEL~~lLg~~tg~~TVPQV  316 (423)
                      ..+.. .|+|++.      .++|+.|. +    .++.+.+++.+..+|+....     +...++.+.++    -..+|.+
T Consensus        28 ~~~~~-~vlv~F~------a~wC~~C~~~~p~l~~l~~~~~v~~~~vd~~~~~~~~~~d~~~~l~~~~~----v~~~Pt~   96 (135)
T 3emx_A           28 QLLQG-DAILAVY------SKTCPHCHRDWPQLIQASKEVDVPIVMFIWGSLIGERELSAARLEMNKAG----VEGTPTL   96 (135)
T ss_dssp             HHHTS-SEEEEEE------ETTCHHHHHHHHHHHHHHTTCCSCEEEEEECTTCCHHHHHHHHHHHHHHT----CCSSSEE
T ss_pred             HHhCC-cEEEEEE------CCcCHhhhHhChhHHHHHHHCCCEEEEEECCCchhhhhhhhhHHHHHHcC----CceeCeE
Confidence            34444 8888865      47999887 3    45555677888888884322     22345555554    3578876


Q ss_pred             Ee--CCEEE
Q 045109          317 FV--GKKYI  323 (423)
Q Consensus       317 FV--dGe~I  323 (423)
                      ++  +|+.+
T Consensus        97 ~~~~~G~~v  105 (135)
T 3emx_A           97 VFYKEGRIV  105 (135)
T ss_dssp             EEEETTEEE
T ss_pred             EEEcCCEEE
Confidence            65  67543

>3m8n_A Possible glutathione S-transferase; PSI-II, structural genomics, protein structure initiative, nysgxrc; 2.04A {Rhodopseudomonas palustris}

Probab=89.63  E-value=0.75  Score=40.64  Aligned_cols=71  Identities=14%  Similarity=0.169  Sum_probs=50.6

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChh--hHHHHHHHHcCCCCCCCCCceEe-CCEEEcchHHH
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSG--FKNELKELLGDGFSGGGLPRVFV-GKKYIGGAEEI  329 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~--~reEL~~lLg~~tg~~TVPQVFV-dGe~IGGaDEV  329 (423)
                      +.||       .-..|++|. |+-+|+..||.|+.+.|++...  ...++.+    .....+||.+-+ +|..|.....|
T Consensus         4 ~~Ly-------~~~~sp~~~~vr~~L~~~gi~~e~~~v~~~~~~~~~~~~~~----~~P~g~vP~L~~~~g~~l~eS~aI   72 (225)
T 3m8n_A            4 YKLY-------SMQRSGNSYKVRLALALLDAPYRAVEVDILRGESRTPDFLA----KNPSGQVPLLETAPGRYLAESNAI   72 (225)
T ss_dssp             EEEE-------ECTTCHHHHHHHHHHHHTTCCEEEEECCGGGTTTSSHHHHT----TCTTCCSSEEECSTTCEEECHHHH
T ss_pred             eEEe-------cCCCCCCHHHHHHHHHHcCCCeEEEEeCCCCCccCCHHHHH----hCCCCCCCEEEeCCCCEEEcHHHH
Confidence            6788       345688775 8999999999999999875321  1233332    233468999997 77888888888


Q ss_pred             HHHHHc
Q 045109          330 RRMHEE  335 (423)
Q Consensus       330 ~~LhEs  335 (423)
                      .+..+.
T Consensus        73 ~~yL~~   78 (225)
T 3m8n_A           73 LWYLAV   78 (225)
T ss_dssp             HHHHHT
T ss_pred             HHHHHc
Confidence            775543

>3cbu_A Probable GST-related protein; thioredoxin fold, GST C-terminal domain-like fold, structura genomics, joint center for structural genomics; 2.05A {Ralstonia eutropha}

Probab=89.62  E-value=0.66  Score=40.23  Aligned_cols=66  Identities=14%  Similarity=0.070  Sum_probs=48.2

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRR  331 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~  331 (423)
                      .+.||+       -..|+++. |+-+|+..||.|+.+.+++. ....++       ....+||.+-.+|..|.....|.+
T Consensus         2 m~~Ly~-------~~~s~~~~~v~~~L~~~gi~~e~~~v~~~-~~~~~~-------~P~g~vP~L~~~~~~l~eS~aI~~   66 (214)
T 3cbu_A            2 MLKLCG-------FAASNYYNKVKLALLEKNVPFEEVLAWIG-ETDTTA-------TPAGKVPYMITESGSLCESEVINE   66 (214)
T ss_dssp             CEEEEE-------CTTCHHHHHHHHHHHHHTCCEEEEECCTT-SSCTTT-------STTCCSCEEEETTEEECSHHHHHH
T ss_pred             eEEEec-------CCCCcHhHHHHHHHHhCCCCCEEEecCcc-cCCccc-------CCCCCCCEEEECCeeeecHHHHHH
Confidence            367883       35688766 89999999999999998751 111122       123589999999999998888877


Q ss_pred             HH
Q 045109          332 MH  333 (423)
Q Consensus       332 Lh  333 (423)
                      ..
T Consensus        67 yL   68 (214)
T 3cbu_A           67 YL   68 (214)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>1ljr_A HGST T2-2, glutathione S-transferase; HET: GSH; 3.20A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 2ljr_A 3ljr_A*

Probab=89.62  E-value=0.71  Score=41.51  Aligned_cols=68  Identities=19%  Similarity=0.229  Sum_probs=49.9

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChh--hHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHH
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSG--FKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIR  330 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~--~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~  330 (423)
                      +.||+       -..|+++. |+-+|+..||.|+.+.++....  ...++.+    .....+||.+..||..|.....|.
T Consensus         3 ~~Ly~-------~~~sp~~~~v~~~L~~~gi~ye~~~v~~~~~~~~~~~~~~----~nP~g~vP~L~d~g~~l~eS~aI~   71 (244)
T 1ljr_A            3 LELFL-------DLVSQPSRAVYIFAKKNGIPLELRTVDLVKGQHKSKEFLQ----INSLGKLPTLKDGDFILTESSAIL   71 (244)
T ss_dssp             CEEEE-------CTTSHHHHHHHHHHHHTTCCCEEEECCTTTTGGGSHHHHT----TCTTCCSCEEEETTEEEECHHHHH
T ss_pred             EEEEe-------cCCCcchHHHHHHHHHcCCCCeEEEecccccccCCHHHHH----hCCCCcCcEEEECCEEEEchHHHH
Confidence            56783       35688776 8999999999999999875432  1234433    223458999999999999988887


Q ss_pred             HH
Q 045109          331 RM  332 (423)
Q Consensus       331 ~L  332 (423)
                      +.
T Consensus        72 ~Y   73 (244)
T 1ljr_A           72 IY   73 (244)
T ss_dssp             HH
T ss_pred             HH
Confidence            73

>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A

Probab=89.50  E-value=1.4  Score=34.20  Aligned_cols=60  Identities=12%  Similarity=0.098  Sum_probs=37.6

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HHHHH----HhC-CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCEE
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VRVIL----KGL-GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKKY  322 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL----~~~-gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe~  322 (423)
                      ...|+|+++      .++|+.|. +...|    +.+ +|.+..+|++..   ..++.+.++    -..+|.+++  +|+.
T Consensus        24 ~~~vlv~f~------a~wC~~C~~~~~~l~~~~~~~~~v~~~~vd~~~~---~~~~~~~~~----v~~~Pt~~~~~~G~~   90 (111)
T 2pu9_C           24 DKPVVLDMF------TQWCGPSKAMAPKYEKLAEEYLDVIFLKLDCNQE---NKTLAKELG----IRVVPTFKILKENSV   90 (111)
T ss_dssp             TSCEEEEEE------CTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSST---THHHHHHHC----CSBSSEEEEESSSSE
T ss_pred             CCEEEEEEE------CCcCHhHHHHCHHHHHHHHHCCCeEEEEEecCcc---hHHHHHHcC----CCeeeEEEEEeCCcE
Confidence            456777664      47999886 44334    344 488888888511   235666665    347898777  7764


Q ss_pred             E
Q 045109          323 I  323 (423)
Q Consensus       323 I  323 (423)
                      +
T Consensus        91 ~   91 (111)
T 2pu9_C           91 V   91 (111)
T ss_dssp             E
T ss_pred             E
Confidence            3

>1k0d_A URE2 protein; nitrate assimilation, structural genomics, gene regulation; HET: GSH; 2.20A {Saccharomyces cerevisiae} SCOP: a.45.1.1 c.47.1.5 PDB: 1jzr_A* 1k0b_A* 1k0c_A* 1k0a_A* 1g6w_A 1g6y_A 1hqo_A

Probab=89.43  E-value=1.2  Score=40.57  Aligned_cols=70  Identities=16%  Similarity=0.130  Sum_probs=50.9

Q ss_pred             CcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChh--hHHHHHHHHcCCCCCCCCCceEe---CCEEEcc
Q 045109          252 EKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSG--FKNELKELLGDGFSGGGLPRVFV---GKKYIGG  325 (423)
Q Consensus       252 ~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~--~reEL~~lLg~~tg~~TVPQVFV---dGe~IGG  325 (423)
                      ..+.||+       -..|+++. |+-+|+..||.|+.+.|++...  ...++.+    .....+||.+..   +|..|..
T Consensus        18 ~~~~Ly~-------~~~~p~~~~v~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~----~nP~g~vP~L~~~~~~g~~l~E   86 (260)
T 1k0d_A           18 EGYTLFS-------HRSAPNGFKVAIVLSELGFHYNTIFLDFNLGEHRAPEFVS----VNPNARVPALIDHGMDNLSIWE   86 (260)
T ss_dssp             SSEEEEE-------CTTCHHHHHHHHHHHHTTCCEEEEECCTTTTGGGSHHHHT----TCTTCCSCEEEEGGGTTEEEES
T ss_pred             CcEEEEc-------CCCCccHHHHHHHHHHCCCCceEEEecCccccccCHHHHh----hCCCCCcCEEEecCCCCeEEEC
Confidence            4688993       45688876 8999999999999998875432  2234433    223458999988   7888888


Q ss_pred             hHHHHHH
Q 045109          326 AEEIRRM  332 (423)
Q Consensus       326 aDEV~~L  332 (423)
                      ...|.+.
T Consensus        87 S~aI~~Y   93 (260)
T 1k0d_A           87 SGAILLH   93 (260)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            8877763

>3ibh_A GST-II, saccharomyces cerevisiae GTT2; glutathione S-transferase, transferase; HET: GSH; 2.10A {Saccharomyces cerevisiae} PDB: 3erf_A* 3erg_A*

Probab=89.38  E-value=0.72  Score=40.44  Aligned_cols=70  Identities=19%  Similarity=0.230  Sum_probs=49.9

Q ss_pred             CcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCC--cEEEEECCCChh--hHHHHHHHHcCCCCCCCCCceE-eCCEEEcc
Q 045109          252 EKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGV--RVDERDLSMHSG--FKNELKELLGDGFSGGGLPRVF-VGKKYIGG  325 (423)
Q Consensus       252 ~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV--~yeErDVsmd~~--~reEL~~lLg~~tg~~TVPQVF-VdGe~IGG  325 (423)
                      .++.||       .-..|+++. |+-+|+..||  .|+.+.|+....  ...++.+..    ...+||.+. .||..|..
T Consensus        17 ~~~~Ly-------~~~~sp~~~~v~~~L~~~gi~~~~~~~~v~~~~~~~~~~~~~~~n----P~g~vP~L~~~~g~~l~e   85 (233)
T 3ibh_A           17 QKMIIY-------DTPAGPYPARVRIALAEKNMLSSVQFVRINLWKGEHKKPEFLAKN----YSGTVPVLELDDGTLIAE   85 (233)
T ss_dssp             --CEEE-------ECTTCHHHHHHHHHHHHTTCGGGCEEEECCGGGTGGGSHHHHHHC----TTCCSCEEECTTCCEEES
T ss_pred             cceEEe-------cCCCCCccHHHHHHHHhcCCCCCceEEEeccccccccChHHhccC----CCCccceEEecCCeEEec
Confidence            567889       345688776 8999999999  999998875432  234554432    235899999 68888888


Q ss_pred             hHHHHHH
Q 045109          326 AEEIRRM  332 (423)
Q Consensus       326 aDEV~~L  332 (423)
                      ...|.+.
T Consensus        86 S~aI~~y   92 (233)
T 3ibh_A           86 CTAITEY   92 (233)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            8877764

>2gsq_A Squid GST, glutathione S-transferase; squid digestive gland, sigma class; HET: GBI; 2.20A {Ommastrephes sloani} SCOP: a.45.1.1 c.47.1.5 PDB: 1gsq_A*

Probab=89.36  E-value=0.82  Score=39.47  Aligned_cols=68  Identities=16%  Similarity=0.171  Sum_probs=49.4

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRR  331 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~  331 (423)
                      ++.||+       -..++++. |+-+|+..||.|+.+.++..  ...++.+.    ....+||.+-.||..|.....|.+
T Consensus         2 ~~~Ly~-------~~~s~~~~~v~~~L~~~gi~~e~~~v~~~--~~~~~~~~----~P~g~vP~L~~~g~~l~eS~aI~~   68 (202)
T 2gsq_A            2 KYTLHY-------FPLMGRAELCRFVLAAHGEEFTDRVVEMA--DWPNLKAT----MYSNAMPVLDIDGTKMSQSMCIAR   68 (202)
T ss_dssp             CEEEEE-------CSSSGGGHHHHHHHHHTTCCCEEEECCTT--THHHHGGG----SGGGSSCEEEETTEEECCHHHHHH
T ss_pred             CcEEEE-------cCCCchhHHHHHHHHHcCCCeeEEEeCHH--HHHhhccc----CCCCCCCEEEECCEEEecHHHHHH
Confidence            367783       33577765 89999999999999998753  23344332    223589999999999999888877


Q ss_pred             HH
Q 045109          332 MH  333 (423)
Q Consensus       332 Lh  333 (423)
                      ..
T Consensus        69 yL   70 (202)
T 2gsq_A           69 HL   70 (202)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A

Probab=89.08  E-value=1.8  Score=33.83  Aligned_cols=37  Identities=14%  Similarity=0.115  Sum_probs=23.1

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-----HHHHHHhC-CCcEEEEECCCC
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-----VRVILKGL-GVRVDERDLSMH  293 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-----VK~LL~~~-gV~yeErDVsmd  293 (423)
                      ...++|++.      .++|+.|.     +.++.+.+ ++.+..++++.+
T Consensus        25 ~k~~ll~f~------~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~   67 (136)
T 1zzo_A           25 GKPAVLWFW------APWCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQ   67 (136)
T ss_dssp             TSCEEEEEE------CTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSC
T ss_pred             CCeEEEEEE------cCCChhHHHHHHHHHHHHHHcCCeEEEEEeCCCC
Confidence            445666654      47899886     24444455 577777777543

>3ic8_A Uncharacterized GST-like proteinprotein; glutathione, transferase, PSI, MCSG, structural genomics; 2.40A {Pseudomonas syringae PV}

Probab=88.95  E-value=1.1  Score=42.02  Aligned_cols=69  Identities=17%  Similarity=0.142  Sum_probs=51.4

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRR  331 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~  331 (423)
                      .++||       .-..|++|. |+-+|+.+||.|+.+.++.. ....++.++-+   ...+||.+.++|..|.....|.+
T Consensus         3 ~~~Ly-------~~~~sp~~~kvr~~L~~~gi~ye~~~v~~~-~~~~~~~~~n~---P~g~vPvL~~~g~~l~eS~aI~~   71 (310)
T 3ic8_A            3 ELILH-------HYPTSLFAEKARLMLGFKGVNWRSVTIPSI-MPKPDLTALTG---GYRKTPVLQIGADIYCDTALMAR   71 (310)
T ss_dssp             CEEEE-------ECTTCGGGHHHHHHHHHHTCEEEEEECCSS-SCCHHHHHHHS---SCCCSCEEEETTEEECSHHHHHH
T ss_pred             eEEEE-------ecCCCcHHHHHHHHHHhcCCCcEEEEcCCC-CCcHHHHHhcC---CCCceeEEEECCEEEcCHHHHHH
Confidence            47888       345688655 99999999999999998753 22445555441   24589999999999988887776


Q ss_pred             H
Q 045109          332 M  332 (423)
Q Consensus       332 L  332 (423)
                      .
T Consensus        72 y   72 (310)
T 3ic8_A           72 R   72 (310)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A

Probab=88.81  E-value=2.3  Score=33.16  Aligned_cols=59  Identities=17%  Similarity=0.247  Sum_probs=38.0

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HH----HHHHhC--CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCE
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VR----VILKGL--GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKK  321 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK----~LL~~~--gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe  321 (423)
                      ...++||++      .++|+.|. +.    ++.+.+  ++.+..+|++.+.    ++.+.++    ...+|.+++  +|+
T Consensus        30 ~~~~lv~f~------~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~----i~~~Pt~~~~~~g~   95 (121)
T 2i1u_A           30 NKPVLVDFW------ATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNP----ETARNFQ----VVSIPTLILFKDGQ   95 (121)
T ss_dssp             SSCEEEEEE------CTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH----HHHHHTT----CCSSSEEEEEETTE
T ss_pred             CCcEEEEEE------CCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCH----HHHHhcC----CCcCCEEEEEECCE
Confidence            345666664      47999886 44    344444  4788888887543    4555554    357899887  887


Q ss_pred             EE
Q 045109          322 YI  323 (423)
Q Consensus       322 ~I  323 (423)
                      .+
T Consensus        96 ~~   97 (121)
T 2i1u_A           96 PV   97 (121)
T ss_dssp             EE
T ss_pred             EE
Confidence            64

>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2

Probab=88.75  E-value=0.88  Score=35.14  Aligned_cols=58  Identities=21%  Similarity=0.324  Sum_probs=35.6

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HH----HHHHhC-----CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VR----VILKGL-----GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--  318 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK----~LL~~~-----gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--  318 (423)
                      ...|+|+++      .++|+.|. +.    ++.+.+     +|.+..+|++.+.    ++.+.++    ...+|.+++  
T Consensus        24 ~~~~lv~f~------~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~----~~~~~~~----v~~~Pt~~~~~   89 (120)
T 1mek_A           24 HKYLLVEFY------APWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEES----DLAQQYG----VRGYPTIKFFR   89 (120)
T ss_dssp             CSEEEEEEE------CSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCC----SSHHHHT----CCSSSEEEEEE
T ss_pred             CCeEEEEEE------CCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCH----HHHHHCC----CCcccEEEEEe
Confidence            345666654      47899886 33    333333     4778888886554    3444444    357999988  


Q ss_pred             CCEE
Q 045109          319 GKKY  322 (423)
Q Consensus       319 dGe~  322 (423)
                      +|+.
T Consensus        90 ~g~~   93 (120)
T 1mek_A           90 NGDT   93 (120)
T ss_dssp             SSCS
T ss_pred             CCCc
Confidence            7753

>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A

Probab=88.72  E-value=1.9  Score=33.83  Aligned_cols=60  Identities=13%  Similarity=0.198  Sum_probs=38.6

Q ss_pred             CCCcEEEEEeCCCCCCCCCCcHHH-HHHHH----HhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCEE
Q 045109          250 GKEKLVVYFTSLRGIRKTYEDCCH-VRVIL----KGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKKY  322 (423)
Q Consensus       250 ~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL----~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe~  322 (423)
                      ....|+|+++      .++|+.|. +...|    +.+++.+..+|++.+.    ++.+.++    ...+|.+++  +|+.
T Consensus        32 ~~~~~vv~f~------a~wC~~C~~~~~~~~~~~~~~~~~~~~vd~~~~~----~~~~~~~----v~~~Pt~~~~~~G~~   97 (117)
T 2xc2_A           32 KNKLVVVDFF------ATWCGPCKTIAPLFKELSEKYDAIFVKVDVDKLE----ETARKYN----ISAMPTFIAIKNGEK   97 (117)
T ss_dssp             TTSCEEEEEE------CTTCHHHHHHHHHHHHHHTTSSSEEEEEETTTSH----HHHHHTT----CCSSSEEEEEETTEE
T ss_pred             CCCEEEEEEE------CCCCHhHHHHhHHHHHHHHHcCcEEEEEECCccH----HHHHHcC----CCccceEEEEeCCcE
Confidence            3455666654      47999886 44334    4457888888886443    4555544    357999887  8875


Q ss_pred             E
Q 045109          323 I  323 (423)
Q Consensus       323 I  323 (423)
                      +
T Consensus        98 ~   98 (117)
T 2xc2_A           98 V   98 (117)
T ss_dssp             E
T ss_pred             E
Confidence            4

>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}

Probab=88.67  E-value=1  Score=34.88  Aligned_cols=59  Identities=15%  Similarity=0.107  Sum_probs=33.5

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HHHHH----HhC-CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCEE
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VRVIL----KGL-GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKKY  322 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL----~~~-gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe~  322 (423)
                      ...|+||++      .++|+.|. +...|    +.+ ++.+..+|++.+.    ++.+.++    -..+|.+++  +|+.
T Consensus        18 ~~~vlv~f~------a~wC~~C~~~~p~~~~~~~~~~~~~~~~vd~~~~~----~l~~~~~----v~~~Pt~~~~~~G~~   83 (105)
T 4euy_A           18 QQLVLLFIK------TENCGVCDVMLRKVNYVLENYNYVEKIEILLQDMQ----EIAGRYA----VFTGPTVLLFYNGKE   83 (105)
T ss_dssp             SSEEEEEEE------ESSCHHHHHHHHHHHHHHHTCTTEEEEEEEECCC-----------------CCCCEEEEEETTEE
T ss_pred             CCCEEEEEe------CCCCcchHHHHHHHHHHHHHcCCceEEEEECCCCH----HHHHhcC----CCCCCEEEEEeCCeE
Confidence            455667654      47999886 44444    344 5777888887554    3333333    357898665  8877


Q ss_pred             E
Q 045109          323 I  323 (423)
Q Consensus       323 I  323 (423)
                      +
T Consensus        84 ~   84 (105)
T 4euy_A           84 I   84 (105)
T ss_dssp             E
T ss_pred             E
Confidence            6

>3gtu_B Glutathione S-transferase; conjugation, detoxification, cytosolic, heterodimer; 2.80A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5

Probab=88.65  E-value=1.8  Score=38.08  Aligned_cols=75  Identities=16%  Similarity=0.212  Sum_probs=49.6

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChh---hHHHHHHHHcCC-CCCCCCCceEeCCEEEcc
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSG---FKNELKELLGDG-FSGGGLPRVFVGKKYIGG  325 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~---~reEL~~lLg~~-tg~~TVPQVFVdGe~IGG  325 (423)
                      ..+++||+.       ..++++. |+-+|+..||.|+.+.|++...   ...+........ ....+||.+..+|..|..
T Consensus         3 ~~~~~Ly~~-------~~s~~~~~vr~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~~~~~~~~P~g~vP~L~d~g~~l~e   75 (224)
T 3gtu_B            3 ESSMVLGYW-------DIRGLAHAIRLLLEFTDTSYEEKRYTCGEAPDYDRSQWLDVKFKLDLDFPNLPYLLDGKNKITQ   75 (224)
T ss_dssp             CCCEEEEEE-------SSSGGGHHHHHHHHHTTCCEEEEEECCCCSSSCCCHHHHHHHTTSCCSSCCSSEEEETTEEEES
T ss_pred             CCCcEEEEe-------CCCcchHHHHHHHHHcCCCceEEEeecCCcccccHHHHHhhhhhcCCCCCCCCEEEECCEEeec
Confidence            345677743       3466655 8999999999999999875431   123333322111 223589999888888888


Q ss_pred             hHHHHHH
Q 045109          326 AEEIRRM  332 (423)
Q Consensus       326 aDEV~~L  332 (423)
                      ...|.+.
T Consensus        76 S~aI~~y   82 (224)
T 3gtu_B           76 SNAILRY   82 (224)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            8877764

>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}

Probab=88.41  E-value=4.5  Score=33.25  Aligned_cols=60  Identities=15%  Similarity=0.195  Sum_probs=37.8

Q ss_pred             CCCcEEEEEeCCCCCCCCCCcHHH-HH----HHHHhC--CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CC
Q 045109          250 GKEKLVVYFTSLRGIRKTYEDCCH-VR----VILKGL--GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GK  320 (423)
Q Consensus       250 ~~~kVVIYtTSLrGIRKT~c~Cc~-VK----~LL~~~--gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dG  320 (423)
                      ....|+|++.      .++|+.|. +.    ++.+.+  ++.+..+|++.+.    ++.+.++    ...+|.+++  +|
T Consensus        54 ~~k~vlv~F~------a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~----~l~~~~~----v~~~Pt~~~~~~G  119 (148)
T 3p2a_A           54 DDLPMVIDFW------APWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEP----ALSTRFR----IRSIPTIMLYRNG  119 (148)
T ss_dssp             CSSCEEEEEE------CSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH----HHHHHTT----CCSSSEEEEEETT
T ss_pred             cCCcEEEEEE------CCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCH----HHHHHCC----CCccCEEEEEECC
Confidence            3455777654      47998886 33    444444  4777788886543    4555554    357898866  88


Q ss_pred             EEE
Q 045109          321 KYI  323 (423)
Q Consensus       321 e~I  323 (423)
                      +.+
T Consensus       120 ~~~  122 (148)
T 3p2a_A          120 KMI  122 (148)
T ss_dssp             EEE
T ss_pred             eEE
Confidence            654

>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1

Probab=88.30  E-value=0.58  Score=42.20  Aligned_cols=18  Identities=28%  Similarity=0.482  Sum_probs=14.7

Q ss_pred             CCCCCCceEe-CCEEEcch
Q 045109          309 SGGGLPRVFV-GKKYIGGA  326 (423)
Q Consensus       309 g~~TVPQVFV-dGe~IGGa  326 (423)
                      +-..+|.+|| ||+.+.|+
T Consensus       178 gV~gTPt~vi~nG~~~~G~  196 (211)
T 1t3b_A          178 GVRGTPSIVTSTGELIGGY  196 (211)
T ss_dssp             TCCSSCEEECTTSCCCCSC
T ss_pred             CCCcCCEEEEeCCEEecCC
Confidence            3457999999 99988876

>3f6d_A Adgstd4-4, glutathione transferase GST1-4; HET: GTX; 1.70A {Anopheles dirus} PDB: 3f63_A* 1jlw_A* 3g7i_A* 3g7j_A*

Probab=88.28  E-value=1  Score=39.35  Aligned_cols=63  Identities=16%  Similarity=0.215  Sum_probs=46.8

Q ss_pred             CCCCcHHH-HHHHHHhCCCcEEEEECCCChh--hHHHHHHHHcCCCCCCCCCceEe-CCEEEcchHHHHHH
Q 045109          266 KTYEDCCH-VRVILKGLGVRVDERDLSMHSG--FKNELKELLGDGFSGGGLPRVFV-GKKYIGGAEEIRRM  332 (423)
Q Consensus       266 KT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~--~reEL~~lLg~~tg~~TVPQVFV-dGe~IGGaDEV~~L  332 (423)
                      -..|++|. |+-+|+..||.|+.+.++....  ...++.+..    ...+||.+-. +|..|.....|.+.
T Consensus         6 ~~~s~~~~~v~~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~~----P~g~vP~L~~~~g~~l~eS~aI~~y   72 (219)
T 3f6d_A            6 LPGSAPCRAVQMTAAAVGVELNLKLTNLMAGEHMKPEFLKLN----PQHCIPTLVDEDGFVLWESRAIQIY   72 (219)
T ss_dssp             CTTCHHHHHHHHHHHHHTCCCEEEECCTTTTGGGSHHHHHHC----TTCCSCEEECTTSCEEESHHHHHHH
T ss_pred             CCCCCchHHHHHHHHHcCCCceEEEccCcccccCCHHHHhhC----CCCccCeEEeCCCCEEEcHHHHHHH
Confidence            45688765 8999999999999998875432  234454432    2358999999 99999888888774

>2on5_A Nagst-2, Na glutathione S-transferase 2; hookworm; HET: GSH; 1.90A {Necator americanus}

Probab=88.18  E-value=0.83  Score=39.36  Aligned_cols=68  Identities=13%  Similarity=0.157  Sum_probs=49.1

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRR  331 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~  331 (423)
                      ++.||+.       ..|+++. |+-+|+..||.|+.+.++...  ..++.+    .....+||.+-.||..|.....|.+
T Consensus         3 ~~~Ly~~-------~~s~~~~~vr~~L~~~gi~ye~~~v~~~~--~~~~~~----~~P~g~vP~L~~~g~~l~eS~aI~~   69 (206)
T 2on5_A            3 HYKLTYF-------AGRGLAEPIRQIFALAGQKYEDVRYTFQE--WPKHKD----EMPFGQIPVLEEDGKQLAQSFAIAR   69 (206)
T ss_dssp             CEEEEEE-------SSSGGGHHHHHHHHHHTCCCEEEEECTTT--GGGGGG----GSTTSCSCEEEETTEEEESHHHHHH
T ss_pred             ceEEEec-------CCCcchHHHHHHHHHcCCCceEEEecHHH--HHHhcc----CCCCCCCCEEEECCEEEecHHHHHH
Confidence            4678843       3577765 899999999999999887431  223332    2234589999999999998888777


Q ss_pred             HH
Q 045109          332 MH  333 (423)
Q Consensus       332 Lh  333 (423)
                      ..
T Consensus        70 yL   71 (206)
T 2on5_A           70 YL   71 (206)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}

Probab=88.13  E-value=4.6  Score=31.69  Aligned_cols=63  Identities=17%  Similarity=0.161  Sum_probs=37.6

Q ss_pred             hHHHhhhcC-CCcEEEEEeCCCCCCCCCCcHHH-HHHHHH----hC--CCcEEEEECCCChhhHHHHHHHHcCCCCCCCC
Q 045109          242 GAVLDHKCG-KEKLVVYFTSLRGIRKTYEDCCH-VRVILK----GL--GVRVDERDLSMHSGFKNELKELLGDGFSGGGL  313 (423)
Q Consensus       242 ~~~v~~li~-~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~----~~--gV~yeErDVsmd~~~reEL~~lLg~~tg~~TV  313 (423)
                      +.+.+..+. ...|+|+++      .++|+.|. +...|+    .+  +|.+..+|++...    ++.+.++    ...+
T Consensus        11 ~~f~~~~~~~~~~~lv~f~------a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~----~~~~~~~----v~~~   76 (122)
T 3aps_A           11 QTFNEKVLQGKTHWVVDFY------APWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYP----QTCQKAG----IKAY   76 (122)
T ss_dssp             HHHHHHTTTCSSCEEEEEE------CTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCH----HHHHHTT----CCSS
T ss_pred             HHHHHHHhcCCCeEEEEEE------CCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCH----HHHHHcC----CCcc
Confidence            334333333 345666664      47999886 444443    33  5888888887543    4555554    3579


Q ss_pred             CceEe
Q 045109          314 PRVFV  318 (423)
Q Consensus       314 PQVFV  318 (423)
                      |.+++
T Consensus        77 Pt~~~   81 (122)
T 3aps_A           77 PSVKL   81 (122)
T ss_dssp             SEEEE
T ss_pred             ceEEE
Confidence            98876

>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}

Probab=88.03  E-value=4  Score=33.50  Aligned_cols=69  Identities=14%  Similarity=0.120  Sum_probs=41.7

Q ss_pred             hHHHhhhcC-CCcEEEEEeCCCCCCCCCCcHHH-HHHHH----HhC--CCcEEEEECCCChhhHHHHHHHHcCCCCCCCC
Q 045109          242 GAVLDHKCG-KEKLVVYFTSLRGIRKTYEDCCH-VRVIL----KGL--GVRVDERDLSMHSGFKNELKELLGDGFSGGGL  313 (423)
Q Consensus       242 ~~~v~~li~-~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL----~~~--gV~yeErDVsmd~~~reEL~~lLg~~tg~~TV  313 (423)
                      +.+.+..+. ...|||+++      .++|+.|. +...|    +.+  +|.+..+|++...    +|.+.++    -..+
T Consensus        14 ~~f~~~~~~~~~~vlv~F~------a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~----~l~~~~~----v~~~   79 (140)
T 3hz4_A           14 MTWSQQVEDSKKPVVVMFY------SPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNP----WTAEKYG----VQGT   79 (140)
T ss_dssp             HHHHHHTTTCSSCEEEEEE------CTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCH----HHHHHHT----CCEE
T ss_pred             HhHHHHHHhCCCcEEEEEE------CCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCH----hHHHHCC----CCcC
Confidence            344433333 455666654      47999886 44333    333  3788888886543    5555565    3479


Q ss_pred             CceEe--CCEEEc
Q 045109          314 PRVFV--GKKYIG  324 (423)
Q Consensus       314 PQVFV--dGe~IG  324 (423)
                      |.+++  +|+.+.
T Consensus        80 Pt~~~~~~G~~~~   92 (140)
T 3hz4_A           80 PTFKFFCHGRPVW   92 (140)
T ss_dssp             SEEEEEETTEEEE
T ss_pred             CEEEEEeCCcEEE
Confidence            99888  886653

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1

Probab=88.02  E-value=0.24  Score=46.93  Aligned_cols=23  Identities=22%  Similarity=0.697  Sum_probs=15.3

Q ss_pred             cccccCccc-----eEeCCCCCCcceec
Q 045109          358 ACEACGDVR-----FVPCETCSGSCKIY  380 (423)
Q Consensus       358 ~C~~CGG~r-----fVpC~~C~GS~Kv~  380 (423)
                      .|..|.|.+     ...|+.|+|+-.++
T Consensus        40 ~C~~C~G~G~~~g~~~~C~~C~G~G~~~   67 (248)
T 1nlt_A           40 LCKECEGRGGKKGAVKKCTSCNGQGIKF   67 (248)
T ss_dssp             ECTTTTTCSBSTTTCCCCTTSSSSSCEE
T ss_pred             eCCCCcCccCCCCCCccCCCCCCCcEEE
Confidence            477776665     36688888776544

>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A

Probab=87.89  E-value=1.2  Score=40.04  Aligned_cols=18  Identities=22%  Similarity=0.379  Sum_probs=13.8

Q ss_pred             CCCCCCceEe-CCEEEcch
Q 045109          309 SGGGLPRVFV-GKKYIGGA  326 (423)
Q Consensus       309 g~~TVPQVFV-dGe~IGGa  326 (423)
                      +-..+|.+|| ||+.+.|+
T Consensus       178 gV~gtPt~v~~dG~~~~G~  196 (216)
T 1eej_A          178 GVSGTPAVVLSNGTLVPGY  196 (216)
T ss_dssp             TCCSSSEEECTTSCEEESC
T ss_pred             CCCccCEEEEcCCeEecCC
Confidence            3457899998 88888775

>3ubk_A Glutathione transferase; GSH binding; 1.95A {Leptospira interrogans serovar lai} PDB: 3ubl_A*

Probab=87.75  E-value=1  Score=40.47  Aligned_cols=66  Identities=11%  Similarity=0.158  Sum_probs=49.8

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHHH
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRM  332 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~L  332 (423)
                      +.||       .-..|++|. |+-+|+..||.|+.+.|...  ...++.+    .....+||.+.++|..|.....|.+.
T Consensus         4 ~~Ly-------~~~~sp~~~~v~~~L~~~gi~ye~~~v~~~--~~~~~~~----~nP~g~vPvL~~~~~~l~eS~aI~~Y   70 (242)
T 3ubk_A            4 IKLH-------GASISNYVNKVKLGILEKGLEYEQIRIAPS--QEEDFLK----ISPMGKIPVLEMDGKFIFESGAILEF   70 (242)
T ss_dssp             EEEE-------SCTTCHHHHHHHHHHHHHTCCEEEECCCCC--CCHHHHT----TSTTCCSCEEEETTEEECCHHHHHHH
T ss_pred             EEEE-------eCCCChHHHHHHHHHHHcCCCcEEEecCCc--cCHHHHh----cCCCCCcCeEEECCceEecHHHHHHH
Confidence            6788       456788875 89999999999999998532  2344433    23345899999999889888887764

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1

Probab=87.74  E-value=0.26  Score=46.73  Aligned_cols=41  Identities=27%  Similarity=0.689  Sum_probs=31.5

Q ss_pred             CccccccCccceE---------------eCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCccc
Q 045109          356 VGACEACGDVRFV---------------PCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLTR  417 (423)
Q Consensus       356 ~~~C~~CGG~rfV---------------pC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLir  417 (423)
                      ...|..|+|.+.+               +|+.|+|+-+++..                     ..+|+.|+-.|.++
T Consensus        54 ~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~~---------------------~~~C~~C~G~g~~~  109 (248)
T 1nlt_A           54 VKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDP---------------------KDRCKSCNGKKVEN  109 (248)
T ss_dssp             CCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCCT---------------------TSBCSSSTTSCEEE
T ss_pred             CccCCCCCCCcEEEEEEecCceEEEEEEcCCCCCCcCEEecc---------------------CCCCcccCCCceEe
Confidence            3679999998753               79999999887643                     23699999888764

>3r2q_A Uncharacterized GST-like protein YIBF; transferase, glutathione; HET: GSH; 1.05A {Escherichia coli}

Probab=87.73  E-value=0.47  Score=40.69  Aligned_cols=64  Identities=9%  Similarity=-0.017  Sum_probs=45.7

Q ss_pred             CCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceE-eCCEEEcchHHHHHHH
Q 045109          265 RKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVF-VGKKYIGGAEEIRRMH  333 (423)
Q Consensus       265 RKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVF-VdGe~IGGaDEV~~Lh  333 (423)
                      .-..|+++. |+-+|+..||.|+.+.+++. ....++.+    .....+||.+. .||..|.....|.+..
T Consensus         5 ~~~~sp~~~~v~~~l~~~gi~~e~~~v~~~-~~~~~~~~----~~P~g~vP~L~~~~g~~l~eS~aI~~yL   70 (202)
T 3r2q_A            5 GSYTSPFVRKLSILLLEKGITFEFINELPY-NADNGVAQ----FNPLGKVPVLVTEEGECWFDSPIIAEYI   70 (202)
T ss_dssp             ECSSCHHHHHHHHHHHHTTCCCEEEECCTT-SSSCSCTT----TCTTCCSCEEECTTSCEECSHHHHHHHH
T ss_pred             eCCCCcHHHHHHHHHHHcCCCCeEEEecCC-CCcHHHHH----hCCCCCcCeEEecCCcEEecHHHHHHHH
Confidence            345788876 89999999999999998753 11112211    23346899999 6899998888887743

>4ags_A Thiol-dependent reductase 1; transferase, leishmaniasis, DE-gluathionylation; HET: MSE GSH; 2.30A {Leishmania infantum}

Probab=87.72  E-value=1.5  Score=43.20  Aligned_cols=72  Identities=17%  Similarity=0.288  Sum_probs=53.4

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCC---EEEcch
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGK---KYIGGA  326 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdG---e~IGGa  326 (423)
                      ...+.||+       -..|++|. |+-+|+..||.|+.+.|+......+++.++-    ...+||.+.++|   ..|...
T Consensus        24 ~~~~~Ly~-------~~~sp~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~n----P~g~vP~L~~~~~~g~~l~eS   92 (471)
T 4ags_A           24 ARALKLYV-------SATCPFCHRVEIVAREKQVSYDRVAVGLREEMPQWYKQIN----PRETVPTLEVGNADKRFMFES   92 (471)
T ss_dssp             -CCEEEEE-------CTTCHHHHHHHHHHHHTTCCCEEEECCCGGGCCHHHHHHC----TTCCSCEEEECSSSCEEEESH
T ss_pred             CCceEEEC-------CCCCchHHHHHHHHHHcCCCCEEEEeCCCCCccHHHHhhC----CCCccCeEEECCcCeEEEecH
Confidence            45789994       35788876 8999999999999999986433344555542    235899999987   888888


Q ss_pred             HHHHHHH
Q 045109          327 EEIRRMH  333 (423)
Q Consensus       327 DEV~~Lh  333 (423)
                      ..|.+..
T Consensus        93 ~aI~~yL   99 (471)
T 4ags_A           93 MLIAQYL   99 (471)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            8777643

>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}

Probab=87.71  E-value=2.2  Score=34.10  Aligned_cols=54  Identities=20%  Similarity=0.324  Sum_probs=35.0

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HHHHHH----hC-CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VRVILK----GL-GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV  318 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~----~~-gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV  318 (423)
                      ...|+|+++      .++|+.|. +...|.    .+ ++.+..+|++.+.    ++.+.++    ...+|.+++
T Consensus        23 ~~~vlv~f~------a~wC~~C~~~~~~l~~l~~~~~~v~~~~vd~~~~~----~~~~~~~----i~~~Pt~~~   82 (118)
T 2f51_A           23 PGLVLVDFF------ATWCGPCQRLGQILPSIAEANKDVTFIKVDVDKNG----NAADAYG----VSSIPALFF   82 (118)
T ss_dssp             SSCEEEEEE------CTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCH----HHHHHTT----CCSSSEEEE
T ss_pred             CCEEEEEEE------CCCCHHHHHHHHHHHHHHHHCCCeEEEEEECCCCH----HHHHhcC----CCCCCEEEE
Confidence            456666654      47999886 444443    33 7889999987553    4555554    357898766

>3ik7_A Glutathione S-transferase A4; human GST A4-4, enzyme, cytoplasm, polymorphism; HET: BOB; 1.97A {Homo sapiens} PDB: 1gum_A 1gul_A*

Probab=87.60  E-value=2.2  Score=37.31  Aligned_cols=71  Identities=18%  Similarity=0.158  Sum_probs=49.9

Q ss_pred             CcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcC-CCCCCCCCceEeCCEEEcchHHH
Q 045109          252 EKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGD-GFSGGGLPRVFVGKKYIGGAEEI  329 (423)
Q Consensus       252 ~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~-~tg~~TVPQVFVdGe~IGGaDEV  329 (423)
                      +++.||+.       ..++++. |+-+|+..||.|+.+.++..    +++.++-.. .....+||.+-.+|..|.....|
T Consensus         3 ~~~~Ly~~-------~~s~~~~~v~~~L~~~gi~ye~~~v~~~----~~~~~~~p~~~~p~g~vP~L~~~g~~l~eS~aI   71 (222)
T 3ik7_A            3 ARPKLHYP-------NGRGRMESVRWVLAAAGVEFDEEFLETK----EQLYKLQDGNHLLFQQVPMVEIDGMKLVQTRSI   71 (222)
T ss_dssp             CSCEEEEC-------SSCTTTHHHHHHHHHTTCCCEEEECCSH----HHHHHHHHTTCSTTSCSCEEEETTEEEESHHHH
T ss_pred             CCcEEEEe-------CCCcchHHHHHHHHHcCCCeeEEeeCcH----HHHHHhhhcCCCCCCCCCEEEECCEEeehHHHH
Confidence            35678843       3466665 99999999999999999742    344333221 11235899999999999988888


Q ss_pred             HHHH
Q 045109          330 RRMH  333 (423)
Q Consensus       330 ~~Lh  333 (423)
                      .+..
T Consensus        72 ~~yL   75 (222)
T 3ik7_A           72 LHYI   75 (222)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7743

>3tou_A Glutathione S-transferase protein; GSH binding site, GSH; HET: GSH; 1.75A {Ralstonia solanacearum} PDB: 3tot_A*

Probab=87.46  E-value=0.93  Score=40.17  Aligned_cols=64  Identities=11%  Similarity=0.024  Sum_probs=45.7

Q ss_pred             CCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe-CCEEEcchHHHHHHH
Q 045109          265 RKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV-GKKYIGGAEEIRRMH  333 (423)
Q Consensus       265 RKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV-dGe~IGGaDEV~~Lh  333 (423)
                      .-..|++|. |+-+|+..||.|+.+.++..... .++.    ......+||.+.+ ||..|.....|.+..
T Consensus         7 ~~~~sp~~~~vr~~L~~~gi~ye~~~v~~~~~~-~~~~----~~nP~g~vPvL~~~~g~~l~eS~aI~~yL   72 (226)
T 3tou_A            7 GSHASPYTRKVRVVLAEKKIDYQFVLEDVWNAD-TQIH----QFNPLGKVPCLVMDDGGALFDSRVIAEYA   72 (226)
T ss_dssp             ECSSCHHHHHHHHHHHHTTCCCEEEECCTTSTT-CCGG----GTCTTCCSCEEECTTSCEECSHHHHHHHH
T ss_pred             cCCCCchHHHHHHHHHHcCCCcEEEecCccCCc-HHHH----HhCCCCCCCEEEeCCCCEeccHHHHHHHH
Confidence            345688886 89999999999999988643221 1121    2233468999997 788888888877743

>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}

Probab=87.35  E-value=1.7  Score=36.67  Aligned_cols=65  Identities=17%  Similarity=0.269  Sum_probs=38.4

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HHHHH-------Hh--CCCcEEEEECCCCh-------hhHHHHHHHHcCCCCCCCC
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VRVIL-------KG--LGVRVDERDLSMHS-------GFKNELKELLGDGFSGGGL  313 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL-------~~--~gV~yeErDVsmd~-------~~reEL~~lLg~~tg~~TV  313 (423)
                      ...|+||+.     ..++|+.|. ....|       +.  .++.+..+|++...       ....++.+.++    ...+
T Consensus        47 gk~vlv~F~-----ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~----v~~~  117 (154)
T 2ju5_A           47 HKPIGLFFT-----GSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYK----VTGF  117 (154)
T ss_dssp             CCCEEEEEE-----CTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTT----CCSS
T ss_pred             CCeEEEEEe-----CCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcC----CCCC
Confidence            456777753     158999887 33332       22  24667777775433       22345655554    3579


Q ss_pred             CceEe---CCEEEc
Q 045109          314 PRVFV---GKKYIG  324 (423)
Q Consensus       314 PQVFV---dGe~IG  324 (423)
                      |.++|   +|+.+.
T Consensus       118 Pt~~~~d~~G~~~~  131 (154)
T 2ju5_A          118 PELVFIDAEGKQLA  131 (154)
T ss_dssp             SEEEEECTTCCEEE
T ss_pred             CEEEEEcCCCCEEE
Confidence            99876   786665

>4hz2_A Glutathione S-transferase domain; glutathione,enzyme function initiative; HET: GSH; 1.50A {Xanthobacter autotrophicus}

Probab=87.35  E-value=1.3  Score=39.40  Aligned_cols=72  Identities=15%  Similarity=0.128  Sum_probs=51.7

Q ss_pred             CcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCCh--hhHHHHHHHHcCCCCCCCCCceE-eCCEEEcchH
Q 045109          252 EKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHS--GFKNELKELLGDGFSGGGLPRVF-VGKKYIGGAE  327 (423)
Q Consensus       252 ~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~--~~reEL~~lLg~~tg~~TVPQVF-VdGe~IGGaD  327 (423)
                      ..+.||       .-..|++|. |+-+|+..||.|+.+.|+...  ....++.+..    ...+||.+. .||..|....
T Consensus        21 ~m~~Ly-------~~~~sp~~~~vr~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~----P~g~vPvL~~~~g~~l~eS~   89 (230)
T 4hz2_A           21 QSMRIY-------GMNGSGNCWKAAQILSLTGHDFEWVETSSGAAGTRSADFLALN----AIGKVPVVVLDDGTALRESN   89 (230)
T ss_dssp             -CCEEE-------ECTTCHHHHHHHHHHHHTTCCCEEEECCSSTTTTTSHHHHHHC----TTCCSCEEECTTSCEEECHH
T ss_pred             hhheee-------CCCCCccHHHHHHHHHHcCCCceEEEecCCCCccCCHHHHhhC----CCCCCCEEEecCCEEeeCHH
Confidence            346788       345688665 999999999999999987542  2234555442    235899999 8999998888


Q ss_pred             HHHHHHH
Q 045109          328 EIRRMHE  334 (423)
Q Consensus       328 EV~~LhE  334 (423)
                      .|.+..+
T Consensus        90 aI~~yL~   96 (230)
T 4hz2_A           90 AILLHFA   96 (230)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            8877544

>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=87.12  E-value=2  Score=34.69  Aligned_cols=57  Identities=16%  Similarity=0.265  Sum_probs=35.4

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HHHHH----HhC-----CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VRVIL----KGL-----GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--  318 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL----~~~-----gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--  318 (423)
                      ...|+||++      .++|+.|. +...|    +.+     +|.+..+|++.+    .++.+.++    ...+|.++|  
T Consensus        34 ~~~vlv~f~------a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~----~~~~~~~~----v~~~Pt~~~~~   99 (140)
T 2dj1_A           34 KDTVLLEFY------APWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSA----SMLASKFD----VSGYPTIKILK   99 (140)
T ss_dssp             CSEEEEEEC------CTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTC----HHHHHHTT----CCSSSEEEEEE
T ss_pred             CCeEEEEEE------CCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCccc----HHHHHHCC----CCccCeEEEEE
Confidence            345667654      47999887 33333    222     277777777644    34555554    357999887  


Q ss_pred             CCE
Q 045109          319 GKK  321 (423)
Q Consensus       319 dGe  321 (423)
                      +|+
T Consensus       100 ~G~  102 (140)
T 2dj1_A          100 KGQ  102 (140)
T ss_dssp             TTE
T ss_pred             CCc
Confidence            886

>1tw9_A Glutathione S-transferase 2; 1.71A {Heligmosomoides polygyrus} SCOP: a.45.1.1 c.47.1.5

Probab=87.07  E-value=1.1  Score=38.60  Aligned_cols=68  Identities=15%  Similarity=0.148  Sum_probs=48.8

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRR  331 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~  331 (423)
                      ++.||+.       ..|+++. |+-+|+..||.|+.+.++.  +...++.+    .....+||.+-.||..|.....|.+
T Consensus         3 ~~~Ly~~-------~~s~~~~~v~~~L~~~gi~ye~~~v~~--~~~~~~~~----~~P~g~vP~L~~~g~~l~eS~aI~~   69 (206)
T 1tw9_A            3 HYKLTYF-------NGRGAGECARQVFALADQKYEDVRLTQ--ETFVPLKA----TFPFGQVPVLEVDGQQLAQSQAICR   69 (206)
T ss_dssp             CEEEEEE-------SSSGGGHHHHHHHHHTTCCCEEEEECH--HHHGGGGG----GSTTSCSCEEEETTEEEECHHHHHH
T ss_pred             ceEEEEc-------CCCccHHHHHHHHHHcCCCceEEEeCH--HHHHHHcc----cCCCCCCCEEEECCEEEecHHHHHH
Confidence            4678843       3577765 8999999999999998863  21222222    2334589999999999999888877


Q ss_pred             HH
Q 045109          332 MH  333 (423)
Q Consensus       332 Lh  333 (423)
                      ..
T Consensus        70 yL   71 (206)
T 1tw9_A           70 YL   71 (206)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>2ws2_A NU-class GST, glutathione S-transferase; parasite, nematode; 2.01A {Haemonchus contortus}

Probab=86.59  E-value=1.3  Score=38.06  Aligned_cols=68  Identities=16%  Similarity=0.139  Sum_probs=49.1

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRR  331 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~  331 (423)
                      ++.||+.       ..|+++. |+-+|+..||.|+.+.++.+  ...++.+    .....+||.+-.+|..|.....|.+
T Consensus         3 ~~~Ly~~-------~~s~~~~~v~~~L~~~gi~~e~~~v~~~--~~~~~~~----~~P~g~vP~L~~~g~~l~eS~aI~~   69 (204)
T 2ws2_A            3 HYKLTYF-------NGRGAAEIIRQVFVLAGQDYEDVRLTHE--EWPKHKA----SMPFGQLPVLEVDGKQLPQSVAIVR   69 (204)
T ss_dssp             CEEEEEE-------SSSGGGHHHHHHHHHTTCCCEEEEECTT--TGGGTGG----GSTTSCSCEEEETTEEEESHHHHHH
T ss_pred             ccEEEEe-------CCCchHHHHHHHHHHcCCCceEEEecHh--hHHHhhh----cCCCCCCCEEEECCEEeecHHHHHH
Confidence            4678843       3577765 89999999999999988742  1223322    2234589999999999999888877


Q ss_pred             HH
Q 045109          332 MH  333 (423)
Q Consensus       332 Lh  333 (423)
                      ..
T Consensus        70 yL   71 (204)
T 2ws2_A           70 YL   71 (204)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>2on7_A Nagst-1, Na glutathione S-transferase 1; hookworm; 2.40A {Necator americanus}

Probab=86.40  E-value=1.3  Score=38.21  Aligned_cols=68  Identities=15%  Similarity=0.127  Sum_probs=48.8

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRR  331 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~  331 (423)
                      ++.||+.       ..|+++. |+-+|+..||.|+.+.++.  +...++.+    .....+||.+-.+|..|.....|.+
T Consensus         3 ~~~Ly~~-------~~s~~~~~vr~~L~~~gi~~e~~~v~~--~~~~~~~~----~~P~g~vP~L~~~g~~l~eS~aI~~   69 (206)
T 2on7_A            3 HYKLTYF-------AIRGAGECARQIFALADQEFEDVRLDK--EQFAKVKP----DLPFGQVPVLEVDGKQLAQSLAICR   69 (206)
T ss_dssp             CEEEEEE-------SSSTTTHHHHHHHHHHTCCCEEEEECH--HHHHHHGG----GSSSSCSCEEEETTEEEECHHHHHH
T ss_pred             ceEEEEc-------CCCcchHHHHHHHHHcCCCeeEEEecH--HHHHHhCc----CCCCCCCCEEEECCEEEeeHHHHHH
Confidence            4678843       3467665 8999999999999999863  22223322    2334589999999999998888877


Q ss_pred             HH
Q 045109          332 MH  333 (423)
Q Consensus       332 Lh  333 (423)
                      ..
T Consensus        70 yL   71 (206)
T 2on7_A           70 YL   71 (206)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>2yv7_A CG10997-PA, LD46306P, CLIC; dmclic, chloride ION channel, GST fold, metal transport; 1.70A {Drosophila melanogaster}

Probab=86.33  E-value=1.7  Score=40.33  Aligned_cols=79  Identities=15%  Similarity=0.110  Sum_probs=52.8

Q ss_pred             CCcEEEEEeCC--CCCCCCCCcHHH-HHHHH----HhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEE
Q 045109          251 KEKLVVYFTSL--RGIRKTYEDCCH-VRVIL----KGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYI  323 (423)
Q Consensus       251 ~~kVVIYtTSL--rGIRKT~c~Cc~-VK~LL----~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~I  323 (423)
                      ...|+||....  -+.+...||++. |+.+|    +..||.|+.+.+++.. ...++.++    ....+||.+..+|..|
T Consensus        20 ~~~i~Ly~~~~s~~~~~~~~cP~~~rv~~~L~ll~~~~gi~ye~~~v~~~~-~~~~~~~~----nP~gkVPvL~d~g~~l   94 (260)
T 2yv7_A           20 VPEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAELKTISLKVTTVDMQK-PPPDFRTN----FEATHPPILIDNGLAI   94 (260)
T ss_dssp             CCEEEEEEEBCTTTSSSBCCCHHHHHHHHHHHHHHHTTSSEEEEEEECTTS-CC-----C----CTTCCSCEEEETTEEE
T ss_pred             CccEEEEEeccCCCCCccCcChHHHHHHHHHHhHHHhcCCCceEEEecccc-CCHHHHhh----CCCCCCCEEEECCEEE
Confidence            34689996432  234456799876 88888    7889999998887531 12233332    2345899999999999


Q ss_pred             cchHHHHHHHH
Q 045109          324 GGAEEIRRMHE  334 (423)
Q Consensus       324 GGaDEV~~LhE  334 (423)
                      .....|.+..+
T Consensus        95 ~ES~aI~~YL~  105 (260)
T 2yv7_A           95 LENEKIERHIM  105 (260)
T ss_dssp             CSHHHHHHHHH
T ss_pred             eCHHHHHHHHH
Confidence            88888777443

>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}

Probab=86.33  E-value=3.4  Score=33.67  Aligned_cols=62  Identities=19%  Similarity=0.295  Sum_probs=38.1

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HH----HHHHhCC--CcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe---CC
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VR----VILKGLG--VRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV---GK  320 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK----~LL~~~g--V~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV---dG  320 (423)
                      ...|||+++      .++|+.|. +.    ++.+.++  |.+..+|++.+.    ++.+.++    ...+|.+++   +|
T Consensus        38 ~k~~lv~f~------a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~----~l~~~~~----v~~~Pt~~~~~~~G  103 (136)
T 2l5l_A           38 DKPAIVDFY------ADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQ----ELAGAFG----IRSIPSILFIPMEG  103 (136)
T ss_dssp             SSCEEEEEE------CTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH----HHHHHTT----CCSSCEEEEECSSS
T ss_pred             CCEEEEEEE------CCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCH----HHHHHcC----CCCCCEEEEECCCC
Confidence            345666654      47999886 33    3334443  778888886543    4555554    357898775   66


Q ss_pred             E---EEcch
Q 045109          321 K---YIGGA  326 (423)
Q Consensus       321 e---~IGGa  326 (423)
                      +   +.|+.
T Consensus       104 ~~~~~~G~~  112 (136)
T 2l5l_A          104 KPEMAQGAM  112 (136)
T ss_dssp             CCEEEESCC
T ss_pred             cEEEEeCCC
Confidence            4   45654

>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A

Probab=86.26  E-value=1.9  Score=34.91  Aligned_cols=59  Identities=8%  Similarity=0.108  Sum_probs=37.0

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HH----HHHHhC-CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCEE
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VR----VILKGL-GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKKY  322 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK----~LL~~~-gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe~  322 (423)
                      ...|||+++      .++|+.|. +.    ++.+.+ +|.+..+|++.+.    ++.+.++    ...+|.+++  +|+.
T Consensus        46 ~k~vvv~f~------a~wC~~C~~~~~~l~~l~~~~~~v~~~~v~~~~~~----~~~~~~~----v~~~Pt~~~~~~G~~  111 (139)
T 3d22_A           46 GKIVLANFS------ARWCGPSRQIAPYYIELSENYPSLMFLVIDVDELS----DFSASWE----IKATPTFFFLRDGQQ  111 (139)
T ss_dssp             TCCEEEEEE------CTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSH----HHHHHTT----CCEESEEEEEETTEE
T ss_pred             CCEEEEEEE------CCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCcccH----HHHHHcC----CCcccEEEEEcCCeE
Confidence            456777654      47999886 33    344444 5888888887543    4555544    347897665  7764


Q ss_pred             E
Q 045109          323 I  323 (423)
Q Consensus       323 I  323 (423)
                      +
T Consensus       112 ~  112 (139)
T 3d22_A          112 V  112 (139)
T ss_dssp             E
T ss_pred             E
Confidence            4

>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}

Probab=86.21  E-value=5.8  Score=33.59  Aligned_cols=59  Identities=19%  Similarity=0.258  Sum_probs=37.9

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HHHHH----HhC--CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCE
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VRVIL----KGL--GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKK  321 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL----~~~--gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe  321 (423)
                      ...||||+.      .++|+.|. +...|    +.+  +|.|..+|++.+.    ++.+.++    -..+|.+++  +|+
T Consensus        64 ~~~vlv~F~------a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~~----~l~~~~~----i~~~Pt~~~~~~G~  129 (155)
T 2ppt_A           64 DLPLLVDFW------APWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHP----AVAGRHR----IQGIPAFILFHKGR  129 (155)
T ss_dssp             SSCEEEEEE------CTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTST----HHHHHTT----CCSSSEEEEEETTE
T ss_pred             CCcEEEEEE------CCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCccH----HHHHHcC----CCcCCEEEEEeCCe
Confidence            445666654      47998776 33333    333  5888888887553    4555554    357899887  887


Q ss_pred             EE
Q 045109          322 YI  323 (423)
Q Consensus       322 ~I  323 (423)
                      .+
T Consensus       130 ~~  131 (155)
T 2ppt_A          130 EL  131 (155)
T ss_dssp             EE
T ss_pred             EE
Confidence            53

>2yv9_A Chloride intracellular channel EXC-4; chloride ION channel, CLIC, GST fold, metal transport; 1.60A {Caenorhabditis elegans}

Probab=86.18  E-value=3.7  Score=38.66  Aligned_cols=76  Identities=17%  Similarity=0.160  Sum_probs=53.8

Q ss_pred             CcEEEEEeC--CCCCCCCCCcHHH-HHHHH----HhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCEE
Q 045109          252 EKLVVYFTS--LRGIRKTYEDCCH-VRVIL----KGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKKY  322 (423)
Q Consensus       252 ~kVVIYtTS--LrGIRKT~c~Cc~-VK~LL----~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe~  322 (423)
                      ..|.||...  .-|.+...||+|. |+.+|    +..||.|+.+.|++..  .. +.++-.    ..+||.+..  +|..
T Consensus        18 ~~i~Ly~~~~~~~~~~~~~cP~~~rv~~~L~lL~e~kgi~ye~~~vd~~~--~p-fl~~nP----~GkVPvL~d~~~g~~   90 (291)
T 2yv9_A           18 PLLELYVKASGIDARRIGADLFCQEFWMELYALYEIGVARVEVKTVNVNS--EA-FKKNFL----GAQPPIMIEEEKELT   90 (291)
T ss_dssp             CEEEEEEEBCSSCTTSBCCCHHHHHHHHHHHHHHHTTSCEEEEEEECTTC--HH-HHHHHT----TCCSCEEEEGGGTEE
T ss_pred             CCEEEEEecCCCCcCccCcChHHHHHHHHHHHHHHhcCceeEEEEeCCCC--hh-HHhcCC----CCCCCEEEEcCCCeE
Confidence            468899653  2355556899886 78777    6789999999887642  22 444322    358999988  8999


Q ss_pred             EcchHHHHHHHH
Q 045109          323 IGGAEEIRRMHE  334 (423)
Q Consensus       323 IGGaDEV~~LhE  334 (423)
                      |.....|.+..+
T Consensus        91 l~ES~aI~~YL~  102 (291)
T 2yv9_A           91 YTDNREIEGRIF  102 (291)
T ss_dssp             ECSHHHHHHHHH
T ss_pred             EeCHHHHHHHHH
Confidence            988888877443

>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}

Probab=86.13  E-value=1.3  Score=36.56  Aligned_cols=55  Identities=18%  Similarity=0.333  Sum_probs=36.1

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhC----CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe----CCE
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGL----GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV----GKK  321 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~----gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV----dGe  321 (423)
                      .|||+++      .++|+.|. +..+|+.+    +|.+..+|++..    .+|.+.++    ...+|.+++    +|+
T Consensus        42 ~vvv~F~------a~wC~~C~~~~p~l~~l~~~~~v~~~~vd~~~~----~~l~~~~~----v~~~Pt~~~~~~~~g~  105 (133)
T 3cxg_A           42 SIVIKFG------AVWCKPCNKIKEYFKNQLNYYYVTLVDIDVDIH----PKLNDQHN----IKALPTFEFYFNLNNE  105 (133)
T ss_dssp             EEEEEEE------CTTCHHHHHTHHHHHGGGGTEECEEEEEETTTC----HHHHHHTT----CCSSSEEEEEEEETTE
T ss_pred             EEEEEEE------CCCCHHHHHHHHHHHHHHHhcCEEEEEEeccch----HHHHHhcC----CCCCCEEEEEEecCCC
Confidence            5666654      47999887 45566544    567777777643    34555554    357999865    887

>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=86.01  E-value=5.2  Score=31.64  Aligned_cols=59  Identities=15%  Similarity=0.242  Sum_probs=36.3

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HH----HHHHh------CCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe-
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VR----VILKG------LGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV-  318 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK----~LL~~------~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV-  318 (423)
                      ...|+|+++      .++|+.|. +.    ++.+.      .+|.+..+|++.+.    +|.+.++    -..+|.+++ 
T Consensus        25 ~~~~lv~f~------a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~----~l~~~~~----v~~~Pt~~~~   90 (133)
T 1x5d_A           25 EDVWMVEFY------APWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQ----VLASRYG----IRGFPTIKIF   90 (133)
T ss_dssp             SSEEEEEEE------CTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCC----HHHHHHT----CCSSSEEEEE
T ss_pred             CCeEEEEEE------CCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCH----HHHHhCC----CCeeCeEEEE
Confidence            345666654      47999887 33    33333      34778888886543    4555554    347999876 


Q ss_pred             -CCEEE
Q 045109          319 -GKKYI  323 (423)
Q Consensus       319 -dGe~I  323 (423)
                       +|+.+
T Consensus        91 ~~g~~~   96 (133)
T 1x5d_A           91 QKGESP   96 (133)
T ss_dssp             ETTEEE
T ss_pred             eCCCce
Confidence             77643

>1vf1_A Glutathione S-transferase 3; detoxification; HET: GSH; 1.77A {Gallus gallus} PDB: 1vf2_A* 1vf3_A* 1vf4_A

Probab=85.99  E-value=2.7  Score=37.28  Aligned_cols=71  Identities=18%  Similarity=0.109  Sum_probs=48.9

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRR  331 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~  331 (423)
                      .+.||+.       ..++++. |+-+|+..||.|+.+.++. .+...++.+..  .....+||.+-.+|..|.....|.+
T Consensus         4 ~~~Ly~~-------~~s~~~~~vr~~L~~~gi~ye~~~v~~-~~~~~~~~~~~--~nP~g~vP~L~~~g~~l~eS~aI~~   73 (229)
T 1vf1_A            4 KPVLYYF-------NGRGKMESIRWLLAAAGVEFEEVFLET-REQYEKLLQSG--ILMFQQVPMVEIDGMKLVQTRAILN   73 (229)
T ss_dssp             CCEEEEC-------SSCTTTHHHHHHHHHTTCCCEEEECCS-HHHHHHHHHHT--CSTTSCSCEEEETTEEEESHHHHHH
T ss_pred             CeEEEEe-------CCCchhHHHHHHHHHcCCCCeeEecCc-HHHHHHHHHhc--CCCCCCCCEEEECCEEEEcHHHHHH
Confidence            4567742       3466655 8999999999999999863 22223343331  1224589999999999998888877


Q ss_pred             HH
Q 045109          332 MH  333 (423)
Q Consensus       332 Lh  333 (423)
                      ..
T Consensus        74 YL   75 (229)
T 1vf1_A           74 YI   75 (229)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>1nhy_A EF-1-gamma 1, elongation factor 1-gamma 1; protein synthesis, GST-like, translation; 3.00A {Saccharomyces cerevisiae} SCOP: a.45.1.1 c.47.1.5

Probab=85.96  E-value=1.2  Score=38.73  Aligned_cols=65  Identities=12%  Similarity=0.057  Sum_probs=47.8

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe-CCEEEcchHHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV-GKKYIGGAEEIR  330 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV-dGe~IGGaDEV~  330 (423)
                      ++.||+        ..++++. ++-+|+..||.|+.+.++   ....++.++.    ...+||.+.. ||..|.....|.
T Consensus         3 ~~~Ly~--------~~~~~~~~v~~~l~~~gi~~e~~~~~---~~~~~~~~~n----P~g~vP~L~~~~g~~l~eS~aI~   67 (219)
T 1nhy_A            3 QGTLYA--------NFRIRTWVPRGLVKALKLDVKVVTPD---AAAEQFARDF----PLKKVPAFVGPKGYKLTEAMAIN   67 (219)
T ss_dssp             TCEEEC--------CSSHHHHHHHHHHHHHTCCCEEECGG---GCHHHHHHHC----TTCCSSEEECGGGCEEESHHHHH
T ss_pred             ceEEec--------CCCCChHHHHHHHHHcCCCceeeccc---CCCHHHHHHC----CCCCCCeEEcCCCCEEecHHHHH
Confidence            467883        3477776 899999999999999886   2344555432    2358999998 888888888777


Q ss_pred             HH
Q 045109          331 RM  332 (423)
Q Consensus       331 ~L  332 (423)
                      +.
T Consensus        68 ~y   69 (219)
T 1nhy_A           68 YY   69 (219)
T ss_dssp             HH
T ss_pred             HH
Confidence            63

>4exj_A Uncharacterized protein; transferase-like protein, transcription regulation, transfer structural genomics; 1.64A {Lodderomyces elongisporus nrrl yb-4239}

Probab=85.78  E-value=1.9  Score=38.52  Aligned_cols=60  Identities=13%  Similarity=0.003  Sum_probs=43.6

Q ss_pred             CcHHH-HHHHHHhCCCcEEEEECCCCh--hhHHHHHHHHcCCCCCCCCCceEe-CCEEEcchHHHHHH
Q 045109          269 EDCCH-VRVILKGLGVRVDERDLSMHS--GFKNELKELLGDGFSGGGLPRVFV-GKKYIGGAEEIRRM  332 (423)
Q Consensus       269 c~Cc~-VK~LL~~~gV~yeErDVsmd~--~~reEL~~lLg~~tg~~TVPQVFV-dGe~IGGaDEV~~L  332 (423)
                      |+++. |+-+|+..||.|+.+.|++..  ....++.++.    ...+||.+.. +|..|.....|.+.
T Consensus        11 s~~~~~vr~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~~----P~g~vPvL~~~dg~~l~eS~aI~~y   74 (238)
T 4exj_A           11 TGNGRKPLVLGKLLNAPIKVHMFHWPTKDIQEDWYLKLN----PAGIVPTLVDDKGTPITESNNILLY   74 (238)
T ss_dssp             STTTHHHHHHHHHTTCSEEEEECC-CCSGGGSHHHHHHC----TTCCSCEEECTTSCEEESHHHHHHH
T ss_pred             CCchHHHHHHHHHcCCCceEEEecccCCccCCHHHHhhC----CCCCCCEEEeCCCcEEeeHHHHHHH
Confidence            77766 899999999999999887642  2234554442    2358999988 47888888887764

>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A

Probab=85.74  E-value=0.48  Score=35.48  Aligned_cols=24  Identities=29%  Similarity=0.686  Sum_probs=16.4

Q ss_pred             cccccCccce---EeCCCCCCcceecc
Q 045109          358 ACEACGDVRF---VPCETCSGSCKIYY  381 (423)
Q Consensus       358 ~C~~CGG~rf---VpC~~C~GS~Kv~~  381 (423)
                      .|..|+|.+-   -+|..|+|+..+..
T Consensus        11 ~C~~C~GsG~~i~~~C~~C~G~G~v~~   37 (53)
T 3lcz_A           11 TCPNCNGSGREEPEPCPKCLGKGVILT   37 (53)
T ss_dssp             ECTTTTTSCEETTEECTTTTTSSEEEC
T ss_pred             cCcCCcccccCCCCcCCCCCCcEEEEE
Confidence            4777777776   46777777766543

>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}

Probab=85.63  E-value=2.7  Score=33.78  Aligned_cols=65  Identities=22%  Similarity=0.252  Sum_probs=38.5

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HHHHHH------h--CCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe---
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VRVILK------G--LGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV---  318 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~------~--~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV---  318 (423)
                      ...|+||+.      .++|+.|. +...|.      .  .++.+..+|+.. .+...+|.+.++-. ....+|.+++   
T Consensus        29 ~k~vlv~f~------a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~-~~~~~~l~~~~~v~-~~~~~Pt~~~~d~  100 (133)
T 3fk8_A           29 HKPTLLVFG------ANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGN-FDRNLELSQAYGDP-IQDGIPAVVVVNS  100 (133)
T ss_dssp             TCCEEEEEE------CTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTT-TTSSHHHHHHTTCG-GGGCSSEEEEECT
T ss_pred             CCcEEEEEc------CCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCc-ccchHHHHHHhCCc-cCCccceEEEECC
Confidence            456777754      58999887 455555      2  257777888731 11224566665420 0047898775   


Q ss_pred             CCEEE
Q 045109          319 GKKYI  323 (423)
Q Consensus       319 dGe~I  323 (423)
                      +|+.+
T Consensus       101 ~G~~~  105 (133)
T 3fk8_A          101 DGKVR  105 (133)
T ss_dssp             TSCEE
T ss_pred             CCCEE
Confidence            78765

>2x64_A Glutathione-S-transferase; detoxification enzyme; HET: GSH; 2.30A {Xylella fastidiosa}

Probab=85.48  E-value=2.1  Score=36.96  Aligned_cols=70  Identities=19%  Similarity=0.178  Sum_probs=48.9

Q ss_pred             cEEEEEeCCCCCCCCCCcHHHHHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRM  332 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~L  332 (423)
                      .+.||+..      . ..|.+|+-+|+..||.|+.+.++.......++.+.    ....+||.+-.||..|.....|.+.
T Consensus         2 ~~~Ly~~~------~-s~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~----~P~g~vP~L~~~g~~l~eS~aI~~y   70 (207)
T 2x64_A            2 HMKLYIMP------G-ACSLADHILLRWSGSSFDLQFLDHQSMKAPEYLAL----NPSGAVPALQVGDWVLTQNAAILNY   70 (207)
T ss_dssp             CEEEEECT------T-STTHHHHHHHHHHTCCEEEEECCTTTTSSHHHHTT----CTTCCSCEEEETTEEECCHHHHHHH
T ss_pred             eEEEEcCC------C-CcHHHHHHHHHHcCCCcceEEecccccCChhHHhc----CCCCcCCeEeECCEEEeeHHHHHHH
Confidence            46788532      1 23556999999999999999987542122344332    2345899999999999998888774


Q ss_pred             H
Q 045109          333 H  333 (423)
Q Consensus       333 h  333 (423)
                      .
T Consensus        71 L   71 (207)
T 2x64_A           71 I   71 (207)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13

Probab=85.34  E-value=2.2  Score=36.23  Aligned_cols=21  Identities=10%  Similarity=0.116  Sum_probs=16.6

Q ss_pred             CCCCCCceEeCCEEEcchHHH
Q 045109          309 SGGGLPRVFVGKKYIGGAEEI  329 (423)
Q Consensus       309 g~~TVPQVFVdGe~IGGaDEV  329 (423)
                      |-..+|.+||||++|-|+...
T Consensus       146 gv~gtPt~vvng~~~~G~~~~  166 (175)
T 1z6m_A          146 HIQFVPTIIIGEYIFDESVTE  166 (175)
T ss_dssp             TCCSSCEEEETTEEECTTCCH
T ss_pred             CCCCcCeEEECCEEccCCCCH
Confidence            345799999999999886544

>2hnl_A Glutathione S-transferase 1; prostaglandin synthase, river BLI onchocerca volvulus, immune modulation; HET: GSH; 2.00A {Onchocerca volvulus}

Probab=85.32  E-value=1.6  Score=38.76  Aligned_cols=68  Identities=15%  Similarity=0.185  Sum_probs=49.4

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRR  331 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~  331 (423)
                      .+.||+.       ..++++. ++-+|+..||.|+.+.++.  +...++.+    .....+||.+..||..|.....|.+
T Consensus        27 ~~~Ly~~-------~~s~~~~~vr~~L~~~gi~ye~~~v~~--~~~~~~~~----~nP~g~vPvL~~~g~~l~eS~aI~~   93 (225)
T 2hnl_A           27 KYTLTYF-------NGRGRAEVIRLLFALANVSYEDNRITR--DEWKYLKP----RTPFGHVPMLNVSGNVLGESHAIEL   93 (225)
T ss_dssp             CEEEEEE-------SSSGGGHHHHHHHHHHTCCCEEEEECH--HHHHHHGG----GSSSSCSCEEEETTEEEECHHHHHH
T ss_pred             CeEEEEc-------CCCCchHHHHHHHHHCCCCeeEEEeCh--hhhHHhcc----CCCCCCCCEEEECCEEEecHHHHHH
Confidence            5888843       3477765 8999999999999999863  22233322    2334589999999999998888777


Q ss_pred             HH
Q 045109          332 MH  333 (423)
Q Consensus       332 Lh  333 (423)
                      ..
T Consensus        94 YL   95 (225)
T 2hnl_A           94 LL   95 (225)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}

Probab=84.85  E-value=2.3  Score=34.23  Aligned_cols=61  Identities=18%  Similarity=0.336  Sum_probs=37.9

Q ss_pred             CCCcEEEEEeCCCCCCCCCCcHHH-HHHHH----HhC--CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CC
Q 045109          250 GKEKLVVYFTSLRGIRKTYEDCCH-VRVIL----KGL--GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GK  320 (423)
Q Consensus       250 ~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL----~~~--gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dG  320 (423)
                      ....|+|++.      .++|+.|. +...|    +.+  +|.+..+|++.+    .++.+.++    ...+|.+++  +|
T Consensus        41 ~~k~vlv~F~------a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~----~~l~~~~~----v~~~Pt~~~~~~G  106 (128)
T 3ul3_B           41 KNTVIVLYFF------AKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKN----ESLARKFS----VKSLPTIILLKNK  106 (128)
T ss_dssp             CCSEEEEEEE------CTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGC----HHHHHHTT----CCSSSEEEEEETT
T ss_pred             cCCEEEEEEE------CCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCC----HHHHHHcC----CCCcCEEEEEECC
Confidence            3455666654      47999886 33333    344  466777777543    35555554    357999887  88


Q ss_pred             EEEc
Q 045109          321 KYIG  324 (423)
Q Consensus       321 e~IG  324 (423)
                      +.+.
T Consensus       107 ~~~~  110 (128)
T 3ul3_B          107 TMLA  110 (128)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            7664

>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A

Probab=84.54  E-value=10  Score=30.31  Aligned_cols=64  Identities=16%  Similarity=0.252  Sum_probs=34.5

Q ss_pred             CCcEEEEEeCC-CCCCCCCCcHHH-HHHHH----HhC--CCcEEEEECCCCh---hhHHHHHHHHcCCCCCCCCCceEe
Q 045109          251 KEKLVVYFTSL-RGIRKTYEDCCH-VRVIL----KGL--GVRVDERDLSMHS---GFKNELKELLGDGFSGGGLPRVFV  318 (423)
Q Consensus       251 ~~kVVIYtTSL-rGIRKT~c~Cc~-VK~LL----~~~--gV~yeErDVsmd~---~~reEL~~lLg~~tg~~TVPQVFV  318 (423)
                      ...|+|++++- --..+.+|+.|. +...|    +.+  ++.+..+|++...   +...++.+.++    -..+|.+++
T Consensus        24 ~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~~~~~----i~~~Pt~~~   98 (123)
T 1wou_A           24 GKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFRKNLK----VTAVPTLLK   98 (123)
T ss_dssp             TSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHHHHHC----CCSSSEEEE
T ss_pred             CCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHHHHCC----CCeeCEEEE
Confidence            45666766542 111233999776 44444    444  5778888883111   01124545554    357898876

>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A

Probab=84.35  E-value=4.9  Score=32.66  Aligned_cols=37  Identities=16%  Similarity=0.276  Sum_probs=22.6

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-----HHHHHHhC---CCcEEEEECCCC
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-----VRVILKGL---GVRVDERDLSMH  293 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-----VK~LL~~~---gV~yeErDVsmd  293 (423)
                      ...||||+.      .++|+.|.     +.++.+.+   +|.+..++++..
T Consensus        26 gk~vlv~F~------~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~   70 (151)
T 2f9s_A           26 GKGVFLNFW------GTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGES   70 (151)
T ss_dssp             TSEEEEEEE------CTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCC
T ss_pred             CCEEEEEEE------CCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCC
Confidence            455666654      47999886     23343333   577777777544

>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A

Probab=84.27  E-value=2.8  Score=36.12  Aligned_cols=18  Identities=33%  Similarity=0.359  Sum_probs=14.5

Q ss_pred             CCCCCCceEeCCEE-Ecch
Q 045109          309 SGGGLPRVFVGKKY-IGGA  326 (423)
Q Consensus       309 g~~TVPQVFVdGe~-IGGa  326 (423)
                      |-..+|.+||||++ |.|.
T Consensus       147 gv~gtPt~ving~~~~~g~  165 (195)
T 2znm_A          147 RIDSTPTVIVGGKYRVIFN  165 (195)
T ss_dssp             TCCSSSEEEETTTEEECCC
T ss_pred             CCCCCCeEEECCEEEEcCC
Confidence            45679999999996 7764

>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10

Probab=84.20  E-value=2.9  Score=32.87  Aligned_cols=37  Identities=11%  Similarity=0.167  Sum_probs=23.1

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-----HHHHHHhC-CCcEEEEECCCC
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-----VRVILKGL-GVRVDERDLSMH  293 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-----VK~LL~~~-gV~yeErDVsmd  293 (423)
                      ...|+|++.      .++|+.|.     +.++.+.+ ++.+..++++.+
T Consensus        24 ~k~~lv~f~------~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~   66 (136)
T 1lu4_A           24 GKPAVLWFW------TPWCPFCNAEAPSLSQVAAANPAVTFVGIATRAD   66 (136)
T ss_dssp             TSCEEEEEE------CTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSC
T ss_pred             CCEEEEEEE------CCcChhHHHHHHHHHHHHHHCCCcEEEEEEcCCC
Confidence            445666654      47999886     24445555 577777777643

>4glt_A Glutathione S-transferase-like protein; structural genomics, function initiative, EFI; HET: GSH; 2.20A {Methylobacillus flagellatus}

Probab=84.10  E-value=1.4  Score=39.26  Aligned_cols=63  Identities=13%  Similarity=0.095  Sum_probs=45.1

Q ss_pred             CCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe-CCEEEcchHHHHHHH
Q 045109          266 KTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV-GKKYIGGAEEIRRMH  333 (423)
Q Consensus       266 KT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV-dGe~IGGaDEV~~Lh  333 (423)
                      ...||||. |+-+|..+||.|+.+.|+....- .++.+    .....+||.+-+ ||..|.....|.+..
T Consensus        28 ~~~SP~~~rVr~~L~e~gi~~e~~~v~~~~~~-~~~~~----~nP~gkVPvL~~~dG~~l~ES~aI~~YL   92 (225)
T 4glt_A           28 SNTSPYARKVRVVAAEKRIDVDMVLVVLADPE-CPVAD----HNPLGKIPVLILPDGESLYDSRVIVEYL   92 (225)
T ss_dssp             CSSCHHHHHHHHHHHHHTCCCEEEECCTTCSS-SCGGG----TCTTCCSCEEECTTSCEECSHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHhCCCCEEEEeCCCCCC-HHHHH----hCCCCCCCEEEeCCCCEEeehHHHHHHH
Confidence            35699887 99999999999999998743221 12222    223458999887 678898888877743

>3vk9_A Glutathione S-transferase delta; glutathione binding; 2.00A {Bombyx mori}

Probab=83.99  E-value=1.2  Score=39.20  Aligned_cols=68  Identities=19%  Similarity=0.296  Sum_probs=49.3

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChh--hHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHH
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSG--FKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIR  330 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~--~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~  330 (423)
                      +.||+       -..++++. |+-+|+.+||.|+.+.|+....  ...++.++ .   ...+||.+-.||..|.....|.
T Consensus         3 mkLY~-------~~~S~~~~~v~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~-n---P~g~vP~L~d~g~~l~eS~aI~   71 (216)
T 3vk9_A            3 IDLYY-------VPGSAPCRAVLLTAKALNLNLNLKLVDLHHGEQLKPEYLKL-N---PQHTVPTLVDDGLSIWESRAII   71 (216)
T ss_dssp             CEEEE-------CTTCHHHHHHHHHHHHHTCCCEEEECCGGGTGGGSHHHHHH-C---TTCCSCEEEETTEEECCHHHHH
T ss_pred             EEEEe-------CCCChhHHHHHHHHHHcCCCCEEEEeCCCCCccCCHHHHHh-C---CCCccceEecCCceeechHHHH
Confidence            46783       34577765 8999999999999988875432  23455443 2   2348999999999999888887


Q ss_pred             HH
Q 045109          331 RM  332 (423)
Q Consensus       331 ~L  332 (423)
                      +.
T Consensus        72 ~Y   73 (216)
T 3vk9_A           72 TY   73 (216)
T ss_dssp             HH
T ss_pred             HH
Confidence            74

>4ags_A Thiol-dependent reductase 1; transferase, leishmaniasis, DE-gluathionylation; HET: MSE GSH; 2.30A {Leishmania infantum}

Probab=83.83  E-value=1.5  Score=43.18  Aligned_cols=73  Identities=11%  Similarity=0.125  Sum_probs=52.8

Q ss_pred             cCCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe-CCEEEcch
Q 045109          249 CGKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV-GKKYIGGA  326 (423)
Q Consensus       249 i~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV-dGe~IGGa  326 (423)
                      ....+++||       .-.+|+++. ++-+|+..||.|+.+.+++. ...+++.+..    ...+||.|.+ +|..|...
T Consensus       248 ~~~~~~~L~-------~~~~sp~~~rv~~~L~~~gi~y~~~~v~~~-~~~~~~~~~~----P~g~vP~L~~~~g~~l~eS  315 (471)
T 4ags_A          248 GANGGHVLY-------SNLFCPFVDRARLASELRKFQMHIVEVPLH-PQPEWYKYIN----PRDTVPALFTPSGEAVHES  315 (471)
T ss_dssp             GGTTSCEEE-------ECTTCHHHHHHHHHHHHTTCCCEEEECCCS-SCCTTHHHHC----TTCCSCEEECTTSCEEESH
T ss_pred             CCCCcEEEE-------ecCCCchHHHHHHHHHHCCCCcEEEEecCC-cCcHHHHHhC----CCCCcCeEEeCCCcEeecH
Confidence            346679999       445799887 89999999999999998754 2222333332    2358999987 88888887


Q ss_pred             HHHHHHH
Q 045109          327 EEIRRMH  333 (423)
Q Consensus       327 DEV~~Lh  333 (423)
                      ..|.+..
T Consensus       316 ~aI~~yL  322 (471)
T 4ags_A          316 QLIVQYI  322 (471)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            7776643

>2fhe_A GST, glutathione S-transferase; transferase-substrate complex; HET: GSH; 2.30A {Fasciola hepatica} SCOP: a.45.1.1 c.47.1.5 PDB: 2wrt_A 1fhe_A*

Probab=83.41  E-value=3.9  Score=35.75  Aligned_cols=61  Identities=18%  Similarity=0.128  Sum_probs=41.8

Q ss_pred             CcHHH-HHHHHHhCCCcEEEEECCCChhhHHH-HHHHHcCCC-CCCCCCceEeCCEEEcchHHHHHH
Q 045109          269 EDCCH-VRVILKGLGVRVDERDLSMHSGFKNE-LKELLGDGF-SGGGLPRVFVGKKYIGGAEEIRRM  332 (423)
Q Consensus       269 c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reE-L~~lLg~~t-g~~TVPQVFVdGe~IGGaDEV~~L  332 (423)
                      ++++. |+-+|+..||.|+.+.+++.  .+.+ +.... ... ...+||.+-.||..|.....|.+.
T Consensus        10 ~~~~~~v~~~L~~~gi~ye~~~v~~~--~~~~~~~~~~-~~~~P~g~vP~L~d~g~~l~eS~aI~~Y   73 (216)
T 2fhe_A           10 RGLQQPVRLLLEYLGEKYEEQIYERD--DGEKWFSKKF-ELGLDLPNLPYYIDDKCKLTQSLAILRY   73 (216)
T ss_dssp             STTTHHHHHHHHHTTCCEEEEEECTT--CHHHHHHHTT-TSCCSSCCSSEEECSSCEEESHHHHHHH
T ss_pred             CchhHHHHHHHHHcCCCceEEeeCCC--chhhhhcccc-ccCCCCCCCCEEEECCEEEEeHHHHHHH
Confidence            55544 89999999999999998753  2222 22221 111 245899998888888888877764

>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}

Probab=83.38  E-value=5.7  Score=35.44  Aligned_cols=59  Identities=14%  Similarity=0.273  Sum_probs=36.6

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-H----HHHHHhCC--CcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCE
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-V----RVILKGLG--VRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKK  321 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-V----K~LL~~~g--V~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe  321 (423)
                      ...|||++.      .+||+.|. +    .++.+.++  +.+..+|++....    +.+.+    +...+|.+++  +|+
T Consensus        30 ~k~vvv~F~------a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~----l~~~~----~v~~~Pt~~~~~~G~   95 (222)
T 3dxb_A           30 DGAILVDFW------AEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPG----TAPKY----GIRGIPTLLLFKNGE   95 (222)
T ss_dssp             SSCEEEEEE------CTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTT----TGGGG----TCCSBSEEEEEETTE
T ss_pred             CCEEEEEEE------CCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHH----HHHHc----CCCcCCEEEEEECCe
Confidence            445777764      47999886 3    34444554  7788888875543    22233    3457998887  885


Q ss_pred             EE
Q 045109          322 YI  323 (423)
Q Consensus       322 ~I  323 (423)
                      .+
T Consensus        96 ~~   97 (222)
T 3dxb_A           96 VA   97 (222)
T ss_dssp             EE
T ss_pred             EE
Confidence            43

>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=83.15  E-value=7.2  Score=30.89  Aligned_cols=55  Identities=15%  Similarity=0.295  Sum_probs=35.6

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHh-------CCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCE
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKG-------LGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKK  321 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~-------~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe  321 (423)
                      +|+|++.      .++|+.|. +...|..       .+|.+..+|++.+.    ++.+.++    -..+|.+++  +|+
T Consensus        24 ~vlv~f~------a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~----~~~~~~~----v~~~Pt~~~~~~G~   88 (126)
T 1x5e_A           24 DWMIEFY------APWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQP----GLSGRFI----INALPTIYHCKDGE   88 (126)
T ss_dssp             EEEEEEE------CSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCH----HHHHHTT----CCSSSEEEEEETTE
T ss_pred             CEEEEEE------CCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCH----HHHHHcC----CcccCEEEEEeCCe
Confidence            3666654      47999886 4444332       36888888887543    4555554    357899887  886

>3gx0_A GST-like protein YFCG; transferase, glutathione, glutathione disulfide, disulfide bond oxidoreductase; HET: GDS; 2.30A {Escherichia coli}

Probab=82.88  E-value=3.8  Score=35.45  Aligned_cols=60  Identities=12%  Similarity=0.127  Sum_probs=43.8

Q ss_pred             CcHHH-HHHHHHhCCCcEEEEECCCChh--hHHHHHHHHcCCCCCCCCCceEeC---C----EEEcchHHHHHH
Q 045109          269 EDCCH-VRVILKGLGVRVDERDLSMHSG--FKNELKELLGDGFSGGGLPRVFVG---K----KYIGGAEEIRRM  332 (423)
Q Consensus       269 c~Cc~-VK~LL~~~gV~yeErDVsmd~~--~reEL~~lLg~~tg~~TVPQVFVd---G----e~IGGaDEV~~L  332 (423)
                      |+++. |+-+|+..||.|+.+.+++...  ...++.+    .....+||.+-++   |    ..|.....|.+.
T Consensus         9 s~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~----~~P~g~vP~L~~~~~~~dG~~~~l~eS~aI~~y   78 (215)
T 3gx0_A            9 TPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLR----ISPNNKIPAIVDHSPADGGEPLSLFESGAILLY   78 (215)
T ss_dssp             SHHHHHHHHHHHHHTCCEEEEECCTTTTGGGSHHHHT----TCTTSCSCEEEESSCTTCCSCEEEESHHHHHHH
T ss_pred             CCChHHHHHHHHHcCCCcEEEecCCCCCCCCChHHHH----hCCCCCCCEEEeCCCCCCCCceEEEcHHHHHHH
Confidence            78876 8999999999999999875432  1233332    2334589999998   4    788888877764

>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A

Probab=82.86  E-value=6.9  Score=32.70  Aligned_cols=59  Identities=15%  Similarity=0.188  Sum_probs=36.4

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HH----HHHHhC--CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCce--EeCCE
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VR----VILKGL--GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRV--FVGKK  321 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK----~LL~~~--gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQV--FVdGe  321 (423)
                      ...|+|++.      .+||+.|. +.    ++.+.+  ++.+..+|++...+        +....+-..+|.+  |.+|+
T Consensus        23 ~k~vlv~F~------a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~--------~~~~~~i~~~Pt~~~~~~G~   88 (142)
T 1qgv_A           23 DRVVVIRFG------HDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPD--------FNKMYELYDPCTVMFFFRNK   88 (142)
T ss_dssp             SSEEEEEEE------CTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCT--------TTTSSCSCSSCEEEEEETTE
T ss_pred             CCEEEEEEE------CCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCHH--------HHHHcCCCCCCEEEEEECCc
Confidence            456777754      58999886 33    333344  47778888875432        2223345689988  45887


Q ss_pred             EE
Q 045109          322 YI  323 (423)
Q Consensus       322 ~I  323 (423)
                      .|
T Consensus        89 ~v   90 (142)
T 1qgv_A           89 HI   90 (142)
T ss_dssp             EE
T ss_pred             EE
Confidence            66

>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}

Probab=82.68  E-value=1.3  Score=35.47  Aligned_cols=66  Identities=14%  Similarity=0.088  Sum_probs=36.8

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-----HHHHHHhC----CCcEEEEECCCChhhH---------------------HHH
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-----VRVILKGL----GVRVDERDLSMHSGFK---------------------NEL  300 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-----VK~LL~~~----gV~yeErDVsmd~~~r---------------------eEL  300 (423)
                      ...|+||+.      .++|+.|.     +.++.+.+    ++.+..++++.+.+..                     .++
T Consensus        33 gk~vll~F~------~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  106 (148)
T 3fkf_A           33 NRYLLLNFW------ASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSET  106 (148)
T ss_dssp             TSEEEEEEE------CGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHH
T ss_pred             CcEEEEEEE------CCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHH
Confidence            345666654      47888665     35555565    3556666665433211                     133


Q ss_pred             HHHHcCCCCCCCCCceEe---CCEEEcch
Q 045109          301 KELLGDGFSGGGLPRVFV---GKKYIGGA  326 (423)
Q Consensus       301 ~~lLg~~tg~~TVPQVFV---dGe~IGGa  326 (423)
                      .+.+    +...+|.+||   +|+.++..
T Consensus       107 ~~~~----~v~~~P~~~lid~~G~i~~~~  131 (148)
T 3fkf_A          107 AKQY----AILTLPTNILLSPTGKILARD  131 (148)
T ss_dssp             HHHT----TCCSSSEEEEECTTSBEEEES
T ss_pred             HHhc----CCCCcCEEEEECCCCeEEEec
Confidence            3333    3457899765   68777644

>2ycd_A Glutathione S-transferase; SOIL bacteria, herbicide detoxification; HET: GTB; 1.40A {Agrobacterium tumefaciens} PDB: 3lq7_A

Probab=82.57  E-value=1.4  Score=39.09  Aligned_cols=70  Identities=17%  Similarity=0.083  Sum_probs=48.1

Q ss_pred             cEEEEEeCCCCCCCCCC-----cHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcch
Q 045109          253 KLVVYFTSLRGIRKTYE-----DCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGA  326 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c-----~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGa  326 (423)
                      ++.||+       -..|     +++. |+-+|+..||.|+.+.++.......++.+    .....+||.+-.||..|...
T Consensus        18 ~~~Ly~-------~~~s~~~~~~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~----~nP~g~vP~L~~~g~~l~eS   86 (230)
T 2ycd_A           18 TITVFE-------RSPDGGRGLARDMPVRWALEEVGQPYHVRRLSFEAMKEASHLA----YQPFGQIPSYEQGDLILFES   86 (230)
T ss_dssp             EEEEES-------SCTTTTSSCSTHHHHHHHHHHHTCCCEEEEECHHHHTSTTGGG----TCTTSCSCEEEETTEEEECH
T ss_pred             eEEEec-------CCCccccCCCccHHHHHHHHHcCCCceEEEeCccccCCHHHHh----cCCCCCCCEEEECCEEEEcH
Confidence            588993       3344     6664 89999999999999988641111112211    23345899999999999988


Q ss_pred             HHHHHHH
Q 045109          327 EEIRRMH  333 (423)
Q Consensus       327 DEV~~Lh  333 (423)
                      ..|.+..
T Consensus        87 ~aI~~yL   93 (230)
T 2ycd_A           87 GAIVMHI   93 (230)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            8887743

>3iso_A Putative glutathione transferase; GST; HET: GSH; 1.90A {Clonorchis sinensis}

Probab=82.56  E-value=2.8  Score=36.62  Aligned_cols=65  Identities=15%  Similarity=0.126  Sum_probs=43.1

Q ss_pred             CCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHHH
Q 045109          267 TYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRM  332 (423)
Q Consensus       267 T~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~L  332 (423)
                      ..++++. |+-+|+..||.|+.+.|+. ....+.+...........+||.+..+|..|.....|.+.
T Consensus         9 ~~s~~~~~vr~~L~~~gi~ye~~~v~~-~~~~~~~~~~~~~~~P~g~vP~L~d~~~~l~eS~aI~~y   74 (218)
T 3iso_A            9 KIRGLAQPIRLLLEYVGDSYEEHSYGR-CDGEKWQNDKHNLGLELPNLPYYKDGNFSLTQSLAILRY   74 (218)
T ss_dssp             SSSGGGHHHHHHHHHHTCCCEEEEECT-TCHHHHHHHTTSSCCSSCCSSEEEETTEEEESHHHHHHH
T ss_pred             CCCcchHHHHHHHHHcCCCceeeccCC-CCHHHHHhhchhcCCCCCCCCeEEECCEEEecHHHHHHH
Confidence            3477766 8999999999999998851 111122222222122345899998888888888777764

>4hz4_A Glutathione-S-transferase; enzyme function initiative; 1.62A {Actinobacillus pleuropneumoniae}

Probab=81.83  E-value=2.3  Score=37.15  Aligned_cols=68  Identities=16%  Similarity=0.200  Sum_probs=48.9

Q ss_pred             EEEEEeCCCCCCCCCCcHHHHHHHHHhCCCcEEEEECCCChh---hHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHH
Q 045109          254 LVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSG---FKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIR  330 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~VK~LL~~~gV~yeErDVsmd~~---~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~  330 (423)
                      +.||+..       ...+.+|+-+|+..||.|+.+.|++...   ...++.+.    ....+||.+-.+|..|.....|.
T Consensus         4 ~~Ly~~~-------~~~~~~v~~~L~~~gi~ye~~~v~~~~~~~~~~~~~~~~----nP~g~vP~L~~~g~~l~eS~aI~   72 (217)
T 4hz4_A            4 ITLHYLK-------QSCSHRIVWLLEALGLDYELKIYDRLEGTGFAPEELKAQ----HPLGKAPVLQDGDLVLAEGNAII   72 (217)
T ss_dssp             EEEEEES-------SSTTHHHHHHHHHHTCCCEEEEECCCTTTCCCCHHHHTT----STTCCSCEEEETTEEEECHHHHH
T ss_pred             EEEeecC-------CCcHHHHHHHHHHcCCCceEEEEecCcccccCCHHHHhc----CCCCCCCEEEECCEeeecHHHHH
Confidence            6788542       2346679999999999999999876432   13344332    23458999999999999888887


Q ss_pred             HH
Q 045109          331 RM  332 (423)
Q Consensus       331 ~L  332 (423)
                      +.
T Consensus        73 ~y   74 (217)
T 4hz4_A           73 QH   74 (217)
T ss_dssp             HH
T ss_pred             HH
Confidence            74

>4ikh_A Glutathione S-transferase; enzyme function initiative, EFI, structural genomics; HET: GSH; 2.10A {Pseudomonas protegens}

Probab=81.70  E-value=2.4  Score=37.78  Aligned_cols=70  Identities=14%  Similarity=0.219  Sum_probs=49.3

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChh--hHHHHHHHHcCCCCCCCCCceEe----CC--E
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSG--FKNELKELLGDGFSGGGLPRVFV----GK--K  321 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~--~reEL~~lLg~~tg~~TVPQVFV----dG--e  321 (423)
                      ...+.||+       -. |+++. |+-+|+..||.|+.+.|++...  ...++.++    ....+||.|-+    ||  .
T Consensus        20 ~~~~~Ly~-------~~-~~~~~~v~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~----nP~g~vP~L~~~dg~dG~~~   87 (244)
T 4ikh_A           20 PEWIQLYS-------LP-TPNGVKVSIMLEEIGLPYEAHRVSFETQDQMTPEFLSV----SPNNKIPAILDPHGPGDQPL   87 (244)
T ss_dssp             TTSEEEEE-------CS-SHHHHHHHHHHHHHTCCEEEEECCTTTTTTSSHHHHTT----CTTSCSCEEEETTCGGGCCE
T ss_pred             CCeeEEEe-------CC-CCChHHHHHHHHHcCCCceEEEecCCCCCcCChHHHhc----CCCCCCCEEEecCCCCCCce
Confidence            35788993       34 78876 8999999999999998875432  22343332    23458999998    45  6


Q ss_pred             EEcchHHHHHH
Q 045109          322 YIGGAEEIRRM  332 (423)
Q Consensus       322 ~IGGaDEV~~L  332 (423)
                      .|.....|.+.
T Consensus        88 ~l~eS~aI~~y   98 (244)
T 4ikh_A           88 ALFESGAILIY   98 (244)
T ss_dssp             EEESHHHHHHH
T ss_pred             eEEcHHHHHHH
Confidence            78877777664

>2wb9_A Glutathione transferase sigma class; thioredoxin fold; HET: GSH; 1.59A {Fasciola hepatica} PDB: 2wdu_A*

Probab=81.52  E-value=2.1  Score=36.99  Aligned_cols=67  Identities=18%  Similarity=0.392  Sum_probs=48.3

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCC-----EEEcch
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGK-----KYIGGA  326 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdG-----e~IGGa  326 (423)
                      .+.||+.       ..++++. |+-+|+..||.|+.+.++..  ...++.+.    ....+||.+-++|     ..|...
T Consensus         5 ~~~Ly~~-------~~s~~~~~v~~~L~~~gi~~e~~~v~~~--~~~~~~~~----~P~g~vP~L~~~~~~g~~~~l~eS   71 (211)
T 2wb9_A            5 HFKLWYF-------QFRGRAEPIRLLLTCAGVKFEDYQFTMD--QWPTIKPT----LPGGRVPLLDVTGPDGKLRRYQES   71 (211)
T ss_dssp             EEEEEEE-------SSCGGGHHHHHHHHHTTCCCEEEEECTT--THHHHGGG----SGGGCSCEEEEECTTSCEEEEESH
T ss_pred             ceEEEEe-------CCCCchHHHHHHHHHcCCCceEEEechh--hHHHhCcC----CCCCCCCEEEECCCCccceeecCH
Confidence            5778843       3477765 89999999999999998742  23444332    2235899999988     888888


Q ss_pred             HHHHHH
Q 045109          327 EEIRRM  332 (423)
Q Consensus       327 DEV~~L  332 (423)
                      ..|.+.
T Consensus        72 ~aI~~y   77 (211)
T 2wb9_A           72 MAIARL   77 (211)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            877764

>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=81.39  E-value=3.8  Score=32.69  Aligned_cols=54  Identities=15%  Similarity=0.378  Sum_probs=31.6

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HHHHHH----hC----CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VRVILK----GL----GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV  318 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~----~~----gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV  318 (423)
                      ...|+|+++      .++|+.|. +...|+    .+    +|.+..+|++....        +....+-..+|.+++
T Consensus        25 ~~~vlv~f~------a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~--------~~~~~~v~~~Pt~~~   87 (133)
T 2dj3_A           25 KKDVLIEFY------APWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDI--------TNDQYKVEGFPTIYF   87 (133)
T ss_dssp             TSEEEEEEC------CTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCC--------CCSSCCCSSSSEEEE
T ss_pred             CCcEEEEEE------CCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHH--------HHhhcCCCcCCEEEE
Confidence            445677764      47999886 343343    33    36677777653321        222334568999876

>1tu7_A Glutathione S-transferase 2; HET: GSH; 1.50A {Onchocerca volvulus} SCOP: a.45.1.1 c.47.1.5 PDB: 1tu8_A*

Probab=81.06  E-value=2.3  Score=36.95  Aligned_cols=67  Identities=16%  Similarity=0.286  Sum_probs=47.2

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRR  331 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~  331 (423)
                      ++.||+.       ..++++. |+-+|+..||.|+.+.+++..  ..++.+    .....+||.+-.+|..|.....|.+
T Consensus         2 ~~~Ly~~-------~~s~~~~~v~~~L~~~gi~~e~~~v~~~~--~~~~~~----~nP~g~vP~L~~~g~~l~eS~aI~~   68 (208)
T 1tu7_A            2 SYKLTYF-------SIRGLAEPIRLFLVDQDIKFIDDRIAKDD--FSSIKS----QFQFGQLPCLYDGDQQIVQSGAILR   68 (208)
T ss_dssp             CEEEEEE-------SSSGGGHHHHHHHHHTTCCCEEEEECGGG--STTTGG----GSTTSCSCEEEETTEEEESHHHHHH
T ss_pred             CcEEEEc-------CCCcchHHHHHHHHHcCCCceEEEEcHHH--HHHhcc----CCCCCCCCEEEECCEEEEcHHHHHH
Confidence            4567743       3467665 899999999999999886432  122222    2234589999999999988887776


Q ss_pred             H
Q 045109          332 M  332 (423)
Q Consensus       332 L  332 (423)
                      .
T Consensus        69 y   69 (208)
T 1tu7_A           69 H   69 (208)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A

Probab=80.81  E-value=3  Score=33.21  Aligned_cols=35  Identities=11%  Similarity=0.150  Sum_probs=21.3

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-----HHHHHHhCC--CcEEEEECC
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-----VRVILKGLG--VRVDERDLS  291 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-----VK~LL~~~g--V~yeErDVs  291 (423)
                      ...|||++.      .++|+.|.     +.++.+.++  +.+..++++
T Consensus        29 gk~~lv~f~------~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~   70 (148)
T 2b5x_A           29 EKPTLIHFW------SISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMP   70 (148)
T ss_dssp             TSCEEEEEE------CTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECC
T ss_pred             CCEEEEEEE------cCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcC
Confidence            455666654      47999886     234444443  777777764

>1k3y_A GSTA1-1, glutathione S-transferase A1; S-hexyl glutatione, water structu transferase; HET: GTX; 1.30A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 1gsf_A* 1guh_A* 1gsd_A* 1k3o_A 1k3l_A* 1pl1_A* 1pkz_A 1pkw_A* 2r6k_A* 1gse_A* 3u6v_A 1usb_A* 1ydk_A* 3q74_A 3ktl_A* 1pl2_A* 2r3x_A* 1xwg_A 3l0h_A* 1ags_A* ...

Probab=80.62  E-value=3.7  Score=36.00  Aligned_cols=71  Identities=14%  Similarity=0.062  Sum_probs=48.1

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRR  331 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~  331 (423)
                      .+.||+.       ..++++. |+-+|+..||.|+.+.++. .+...++.+..  .....+||.+-.+|..|.....|.+
T Consensus         3 ~~~Ly~~-------~~s~~~~~vr~~L~~~gi~ye~~~v~~-~~~~~~~~~~~--~nP~g~vPvL~~~g~~l~eS~aI~~   72 (221)
T 1k3y_A            3 KPKLHYF-------NARGRMESTRWLLAAAGVEFEEKFIKS-AEDLDKLRNDG--YLMFQQVPMVEIDGMKLVQTRAILN   72 (221)
T ss_dssp             CCEEEEE-------SSSTTTHHHHHHHHHHTCCCEEEEECS-HHHHHHHHHTT--CCTTSCSCEEEETTEEEESHHHHHH
T ss_pred             CcEEEEe-------CCCchhHHHHHHHHHcCCCceEEEeCc-hhHHHHHhhhc--CCCCCCCCEEEECCEEEecHHHHHH
Confidence            3567743       3466665 8999999999999998863 12222333220  1234589999999999998888877


Q ss_pred             HH
Q 045109          332 MH  333 (423)
Q Consensus       332 Lh  333 (423)
                      ..
T Consensus        73 yL   74 (221)
T 1k3y_A           73 YI   74 (221)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A

Probab=80.61  E-value=3.4  Score=36.48  Aligned_cols=53  Identities=21%  Similarity=0.310  Sum_probs=34.8

Q ss_pred             CCCCCcHHH-HHHHHH----hC-CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCE---EEcc
Q 045109          265 RKTYEDCCH-VRVILK----GL-GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKK---YIGG  325 (423)
Q Consensus       265 RKT~c~Cc~-VK~LL~----~~-gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe---~IGG  325 (423)
                      ..++|+.|. +..+|+    .+ +|.+..+|++.+    .++.+.++    -..+|.++|+|+   +.|.
T Consensus       144 ~a~wC~~C~~~~~~~~~~~~~~~~v~~~~vd~~~~----~~l~~~~~----v~~~Pt~~~~G~~~~~~G~  205 (229)
T 2ywm_A          144 VTTSCGYCPSAAVMAWDFALANDYITSKVIDASEN----QDLAEQFQ----VVGVPKIVINKGVAEFVGA  205 (229)
T ss_dssp             ECTTCTTHHHHHHHHHHHHHHCTTEEEEEEEGGGC----HHHHHHTT----CCSSSEEEEGGGTEEEESC
T ss_pred             ECCCCcchHHHHHHHHHHHHHCCCeEEEEEECCCC----HHHHHHcC----CcccCEEEECCEEEEeeCC
Confidence            357999886 444444    33 577888888644    34555554    357999999986   5554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	423
d1t1va_	93	c.47.1.14 (A:) SH3BGRL3 {Mouse (Mus musculus) [Tax	2e-20
d1fova_	82	c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase)	7e-09
d1wika_	109	c.47.1.1 (A:) Thioredoxin-like protein 2 {Mouse (M	7e-08
d1ktea_	105	c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase)	8e-06

>d1t1va_ c.47.1.14 (A:) SH3BGRL3 {Mouse (Mus musculus) [TaxId: 10090]} Length = 93

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: SH3BGR (SH3-binding, glutamic acid-rich protein-like)
domain: SH3BGRL3
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 83.0 bits (205), Expect = 2e-20
 Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 2/88 (2%)

Query: 253 KLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGG 312
            L VY TS+ G R+       V  IL G  ++    D+S  +  ++E++ L G+      
Sbjct: 3   GLRVYSTSVTGSREIKSQQSEVTRILDGKRIQYQLVDISQDNALRDEMRTLAGNP--KAT 60

Query: 313 LPRVFVGKKYIGGAEEIRRMHEEGQLEK 340
            P++  G  Y G  E      E+  L++
Sbjct: 61  PPQIVNGNHYCGDYELFVEAVEQDTLQE 88

>d1fova_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Escherichia coli, Grx3 [TaxId: 562]} Length = 82

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin (Grx, thioltransferase)
species: Escherichia coli, Grx3 [TaxId: 562]

 Score = 50.4 bits (120), Expect = 7e-09
 Identities = 14/73 (19%), Positives = 36/73 (49%), Gaps = 4/73 (5%)

Query: 271 CCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIR 330
           C   + +L   GV   E  +  ++  + E+ +  G       +P++F+  ++IGG +++ 
Sbjct: 14  CHRAKALLSSKGVSFQELPIDGNAAKREEMIKRSG----RTTVPQIFIDAQHIGGYDDLY 69

Query: 331 RMHEEGQLEKVVE 343
            +   G L+ +++
Sbjct: 70  ALDARGGLDPLLK 82

>d1wika_ c.47.1.1 (A:) Thioredoxin-like protein 2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 109

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin-like protein 2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.1 bits (114), Expect = 7e-08
 Identities = 16/95 (16%), Positives = 35/95 (36%), Gaps = 4/95 (4%)

Query: 251 KEKLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSG 310
            +  V+ F               +  IL   GV  +  D+      +  LK         
Sbjct: 13  NKASVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILEDEEVRQGLKTFSN----W 68

Query: 311 GGLPRVFVGKKYIGGAEEIRRMHEEGQLEKVVEGC 345
              P+++V    +GG + ++ + + G+L  +++G 
Sbjct: 69  PTYPQLYVRGDLVGGLDIVKELKDNGELLPILKGE 103

>d1ktea_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Pig (Sus scrofa) [TaxId: 9823]} Length = 105

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin (Grx, thioltransferase)
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 42.4 bits (99), Expect = 8e-06
 Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 8/103 (7%)

Query: 243 AVLDHKCGKEKLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMH--SGFKNEL 300
           A ++ K    K+VV+         T   C   + +L  L  +    +      +   NE+
Sbjct: 3   AFVNSKIQPGKVVVFIKP------TCPFCRKTQELLSQLPFKEGLLEFVDITATSDTNEI 56

Query: 301 KELLGDGFSGGGLPRVFVGKKYIGGAEEIRRMHEEGQLEKVVE 343
           ++ L        +PRVF+GK+ IGG  ++  MH+ G+L   ++
Sbjct: 57  QDYLQQLTGARTVPRVFIGKECIGGCTDLESMHKRGELLTRLQ 99

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	423
d1wika_	109	Thioredoxin-like protein 2 {Mouse (Mus musculus) [	99.85
d1t1va_	93	SH3BGRL3 {Mouse (Mus musculus) [TaxId: 10090]}	99.85
d1ktea_	105	Glutaredoxin (Grx, thioltransferase) {Pig (Sus scr	99.84
d1fova_	82	Glutaredoxin (Grx, thioltransferase) {Escherichia	99.8
d1nm3a1	74	C-terminal, Grx domain of Hybrid-Prx5 {Haemophilus	99.56
d1egoa_	85	Glutaredoxin (Grx, thioltransferase) {Escherichia	99.56
d1r7ha_	74	Glutaredoxin-like NRDH-redoxin {Corynebacterium am	99.46
d1abaa_	87	Glutaredoxin (Grx, thioltransferase) {Bacteriophag	99.46
d1h75a_	76	Glutaredoxin-like NRDH-redoxin {Escherichia coli [	99.44
d1wjka_	100	Thioredoxin-like structure containing protein C330	98.03
d1ttza_	75	Hypothetical protein XCC2852 {Xanthomonas campestr	97.38
d1hyua4	96	Alkyl hydroperoxide reductase subunit F (AhpF), N-	97.36
d1g7oa2	75	Glutaredoxin 2 {Escherichia coli [TaxId: 562]}	96.95
d1oyja2	84	Class tau GST {Rice (Oryza sativa) [TaxId: 4530]}	96.7
d1z9ha2	113	Microsomal prostaglandin E synthase-2 {Crab-eating	96.58
d1gwca2	83	Class tau GST {Aegilops tauschii, also known as Tr	96.38
d1eema2	98	Class omega GST {Human (Homo sapiens) [TaxId: 9606	96.26
d1e6ba2	80	Class zeta GST {Mouse-ear cress (Arabidopsis thali	96.26
d1fw1a2	83	Class zeta GST {Human (Homo sapiens) [TaxId: 9606]	96.12
d1k0ma2	86	Chloride intracellular channel 1 (clic1) {Human (H	95.82
d1v2aa2	83	Class delta GST {Mosquito (Anopheles dirus b), iso	95.63
d1aw9a2	81	Class phi GST {Maize (Zea mays), type III [TaxId:	95.36
d1k0da2	92	Yeast prion protein ure2p, nitrogen regulation fra	95.29
d1r5aa2	85	Class delta GST {Mosquito (Anopheles dirus b), iso	94.73
d1ljra2	79	Class theta GST {Human (Homo sapiens) [TaxId: 9606	94.65
d1axda2	80	Class phi GST {Maize (Zea mays), type I [TaxId: 45	94.31
d1gnwa2	84	Class phi GST {Mouse-ear cress (Arabidopsis thalia	93.52
d1z3ea1	114	Regulatory protein Spx {Bacillus subtilis [TaxId:	93.37
d1rw1a_	114	Hypothetical protein PA3664 (YffB) {Pseudomonas ae	92.53
d1nhoa_	85	MTH807, thioredoxin/glutaredoxin-like protein {Arc	92.28
d1exka_	79	Cysteine-rich domain of the chaperone protein DnaJ	92.19
d1nlta3	74	Mitochondrial protein import protein mas5 (Hsp40,	91.7
d1jlva2	84	Class delta GST {Mosquito (Anopheles dirus b), iso	90.69
d1thxa_	108	Thioredoxin {Anabaena sp., pcc 7120 [TaxId: 1167]}	89.52
d1okta2	85	Pf GST {Malarial parasite (Plasmodium falciparum)	89.03
d2a2ra2	77	Class pi GST {Human (Homo sapiens) [TaxId: 9606]}	88.77
d1a8la2	107	Protein disulfide isomerase, PDI {Archaeon Pyrococ	87.99
d1ep7a_	112	Thioredoxin {Chlamydomonas reinhardtii [TaxId: 305	87.81
d1exka_	79	Cysteine-rich domain of the chaperone protein DnaJ	87.8
d1j9ba_	138	Arsenate reductase ArsC {Escherichia coli [TaxId:	87.79
d1fo5a_	85	MJ0307, thioredoxin/glutaredoxin-like protein {Arc	87.16
d1zmaa1	115	Bacterocin transport accessory protein Bta {Strept	87.02
d1nlta3	74	Mitochondrial protein import protein mas5 (Hsp40,	86.11
d1iloa_	77	MTH985, a thioredoxin {Archaeon Methanobacterium t	85.72
d1xfla_	114	Thioredoxin {Thale cress (Arabidopsis thaliana) [T	84.25
d2cvda2	74	Class sigma GST {Human (Homo sapiens) [TaxId: 9606	83.51
d1gula2	77	Class alpha GST {Human (Homo sapiens), (a1-1) [Tax	82.22
d1ti3a_	113	Thioredoxin {European aspen (Populus tremula), thi	82.07
d1eeja1	156	Disulfide bond isomerase, DsbC, C-terminal domain	81.56
d1r26a_	113	Thioredoxin {Trypanosoma brucei [TaxId: 5691]}	81.48
d1dbya_	107	Thioredoxin {Chlamydomonas reinhardtii [TaxId: 305	80.93

>d1wika_ c.47.1.1 (A:) Thioredoxin-like protein 2 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin-like protein 2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.85  E-value=7.9e-22  Score=165.25  Aligned_cols=99  Identities=17%  Similarity=0.354  Sum_probs=86.8

Q ss_pred             hHHHhhhcCCCcEEEEEeCCCCCCC-CCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeC
Q 045109          242 GAVLDHKCGKEKLVVYFTSLRGIRK-TYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVG  319 (423)
Q Consensus       242 ~~~v~~li~~~kVVIYtTSLrGIRK-T~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVd  319 (423)
                      +..|+.++.+++||||   ++|.+. ++|++|. ||+||+.++|.|.++||+.+.+.+++|.+..+    ++|||||||+
T Consensus         5 ~~~i~~~i~~~~VvvF---~Kgt~~~p~Cp~c~~ak~lL~~~~i~~~~~~v~~~~~~~~~l~~~t~----~~TvPqIFi~   77 (109)
T d1wika_           5 SSGLKVLTNKASVMLF---MKGNKQEAKCGFSKQILEILNSTGVEYETFDILEDEEVRQGLKTFSN----WPTYPQLYVR   77 (109)
T ss_dssp             CCCHHHHHTTSSEEEE---ESSTTTCCCSSTHHHHHHHHHHTCSCEEEEESSSCHHHHHHHHHHHS----CCSSCEEECS
T ss_pred             HHHHHHHHhcCCEEEE---eCCCCCCCCChHHHHHHHHHHhcCCCceEEEecccHHHHHHHHHhcC----CCCCCeEEEC
Confidence            3456789999999999   455432 7899998 89999999999999999988888888877654    6799999999


Q ss_pred             CEEEcchHHHHHHHHcCchHHHHccccc
Q 045109          320 KKYIGGAEEIRRMHEEGQLEKVVEGCEM  347 (423)
Q Consensus       320 Ge~IGGaDEV~~LhEsGeL~kLL~~~~~  347 (423)
                      |++|||+|+|++|+++|+|.++|+..++
T Consensus        78 g~~IGG~ddl~~l~~~G~L~~lL~~~~~  105 (109)
T d1wika_          78 GDLVGGLDIVKELKDNGELLPILKGESG  105 (109)
T ss_dssp             SSEEECHHHHHHHHHHTCSHHHHHTCCS
T ss_pred             CEEEcCHHHHHHHHHCCCHHHHHHhcCC
Confidence            9999999999999999999999998765

>d1t1va_ c.47.1.14 (A:) SH3BGRL3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: SH3BGR (SH3-binding, glutamic acid-rich protein-like)
domain: SH3BGRL3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.85  E-value=8e-22  Score=159.83  Aligned_cols=91  Identities=25%  Similarity=0.397  Sum_probs=84.3

Q ss_pred             CcEEEEEeCCCCCCCCCCcHHHHHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHH
Q 045109          252 EKLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRR  331 (423)
Q Consensus       252 ~kVVIYtTSLrGIRKT~c~Cc~VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~  331 (423)
                      ..|+||+||+.|+|++.-.|.+|++||+.++|.|+++||+++...+++++++.+.  +.+|+|||||||+||||++++.+
T Consensus         2 ~~i~vy~ts~~~~~~~~~~~~r~~~lL~~~~I~y~~iDi~~d~~~~~~~~~~~g~--~~~t~Pqifv~~~~iGg~del~~   79 (93)
T d1t1va_           2 SGLRVYSTSVTGSREIKSQQSEVTRILDGKRIQYQLVDISQDNALRDEMRTLAGN--PKATPPQIVNGNHYCGDYELFVE   79 (93)
T ss_dssp             CCEEEEECSSCSCHHHHHHHHHHHHHHHHTTCCCEEEETTSCHHHHHHHHHHTTC--TTCCSCEEEETTEEEEEHHHHHH
T ss_pred             CCEEEEEccCcCChhhHHHHHHHHHHHHHCCCceEEEEecCchhHHHHHHHhccC--CCceeEEEEECCEEEecHHHHHH
Confidence            4699999999999999888888999999999999999999999999999988753  45799999999999999999999


Q ss_pred             HHHcCchHHHHcc
Q 045109          332 MHEEGQLEKVVEG  344 (423)
Q Consensus       332 LhEsGeL~kLL~~  344 (423)
                      |+++|+|.++|+.
T Consensus        80 ~~e~g~L~~~lk~   92 (93)
T d1t1va_          80 AVEQDTLQEFLKL   92 (93)
T ss_dssp             HHHTTCHHHHTTC
T ss_pred             HHHCCCHHHHhcc
Confidence            9999999999974

>d1ktea_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin (Grx, thioltransferase)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.84  E-value=8.4e-22  Score=162.91  Aligned_cols=97  Identities=26%  Similarity=0.458  Sum_probs=80.9

Q ss_pred             hHHHhhhcCCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCc-----EEEEECCCChhhHHHHHHHHcCCCCCCCCCc
Q 045109          242 GAVLDHKCGKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVR-----VDERDLSMHSGFKNELKELLGDGFSGGGLPR  315 (423)
Q Consensus       242 ~~~v~~li~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~-----yeErDVsmd~~~reEL~~lLg~~tg~~TVPQ  315 (423)
                      ..+|+..+.+++||||       ++++||+|. ||++|+.+++.     |.++|+..+.   +++++.+...++++|+||
T Consensus         2 ~~~v~~~i~~~~Vviy-------sk~~Cp~C~~ak~ll~~~~~~~~~~~~~e~d~~~d~---~~~~~~l~~~~g~~tvPq   71 (105)
T d1ktea_           2 QAFVNSKIQPGKVVVF-------IKPTCPFCRKTQELLSQLPFKEGLLEFVDITATSDT---NEIQDYLQQLTGARTVPR   71 (105)
T ss_dssp             HHHHHHHCCTTCEEEE-------ECSSCHHHHHHHHHHHHSCBCTTSEEEEEGGGSTTH---HHHHHHHHHHHSCCCSCE
T ss_pred             hhHHHHHhccCCEEEE-------ECCCCchHHHHHHHHHHhCCccceeeeeeccccccc---HHHHHHHhhccCCCcCcE
Confidence            4678899999999999       678999998 89999999976     5556665553   344444444456789999


Q ss_pred             eEeCCEEEcchHHHHHHHHcCchHHHHcccccc
Q 045109          316 VFVGKKYIGGAEEIRRMHEEGQLEKVVEGCEMI  348 (423)
Q Consensus       316 VFVdGe~IGGaDEV~~LhEsGeL~kLL~~~~~~  348 (423)
                      |||+|+||||+++|++|+++|+|.++|+.++++
T Consensus        72 Ifi~g~~IGG~~el~~l~~~G~L~~~L~~~Ga~  104 (105)
T d1ktea_          72 VFIGKECIGGCTDLESMHKRGELLTRLQQVGAV  104 (105)
T ss_dssp             EEETTEEEESHHHHHHHHHHTHHHHHHHHHTCB
T ss_pred             EEECCEEEecHHHHHHHHHCCCHHHHHHHcCCC
Confidence            999999999999999999999999999988765

>d1fova_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Escherichia coli, Grx3 [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin (Grx, thioltransferase)
species: Escherichia coli, Grx3 [TaxId: 562]

Probab=99.80  E-value=6.8e-20  Score=144.13  Aligned_cols=80  Identities=21%  Similarity=0.488  Sum_probs=74.3

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRR  331 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~  331 (423)
                      .|+||       ++++||+|. ||++|+.+||.|+++||+.+...+++|.+..|    ++|+|||||||++|||++++.+
T Consensus         2 ~I~iy-------s~~~Cp~C~~ak~~L~~~~i~y~~~di~~~~~~~~~~~~~~g----~~tvP~i~i~~~~IGG~~el~~   70 (82)
T d1fova_           2 NVEIY-------TKETCPYCHRAKALLSSKGVSFQELPIDGNAAKREEMIKRSG----RTTVPQIFIDAQHIGGYDDLYA   70 (82)
T ss_dssp             CEEEE-------ECSSCHHHHHHHHHHHHHTCCCEEEECTTCSHHHHHHHHHHS----SCCSCEEEETTEEEESHHHHHH
T ss_pred             cEEEE-------eCCCCHhHHHHHHHHHHcCCCeEEEeccchHHHHHHHHHHhC----CCCCCeEEECCEEEecHHHHHH
Confidence            58999       678999988 89999999999999999999999999988764    5799999999999999999999


Q ss_pred             HHHcCchHHHHc
Q 045109          332 MHEEGQLEKVVE  343 (423)
Q Consensus       332 LhEsGeL~kLL~  343 (423)
                      |+++|+|.++|+
T Consensus        71 l~~~g~L~~lLk   82 (82)
T d1fova_          71 LDARGGLDPLLK   82 (82)
T ss_dssp             HHHTTCSHHHHC
T ss_pred             HHHcCCHHHHhC
Confidence            999999999985

>d1nm3a1 c.47.1.1 (A:166-239) C-terminal, Grx domain of Hybrid-Prx5 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: C-terminal, Grx domain of Hybrid-Prx5
species: Haemophilus influenzae [TaxId: 727]

Probab=99.56  E-value=3.1e-15  Score=115.24  Aligned_cols=69  Identities=22%  Similarity=0.466  Sum_probs=58.8

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHH
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEI  329 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV  329 (423)
                      +.+|+||       ++++|++|. ||++|+.+||.|+++|++.+.. ++++.+.    +++.|+|||||||++|||+++|
T Consensus         4 ~~~I~iY-------s~~~C~~C~~ak~lL~~~~i~~~~~~v~~~~~-~~~~~~~----~~~~tvP~i~i~g~~IGG~~el   71 (74)
T d1nm3a1           4 QESISIF-------TKPGCPFCAKAKQLLHDKGLSFEEIILGHDAT-IVSVRAV----SGRTTVPQVFIGGKHIGGSDDL   71 (74)
T ss_dssp             CCCEEEE-------ECSSCHHHHHHHHHHHHHTCCCEEEETTTTCC-HHHHHHH----TCCSSSCEEEETTEEEESHHHH
T ss_pred             cCcEEEE-------ECCCCHHHHHHHHHHHHcCCCeEEEEccCcHH-HHHHHHH----hCCccCCEEEECCEEEEChHHH
Confidence            5689999       678999998 8999999999999999987653 5565554    3567999999999999999998


Q ss_pred             HH
Q 045109          330 RR  331 (423)
Q Consensus       330 ~~  331 (423)
                      .+
T Consensus        72 ~~   73 (74)
T d1nm3a1          72 EK   73 (74)
T ss_dssp             HH
T ss_pred             hh
Confidence            65

>d1egoa_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin (Grx, thioltransferase)
species: Escherichia coli [TaxId: 562]

Probab=99.56  E-value=9.7e-16  Score=121.19  Aligned_cols=74  Identities=19%  Similarity=0.349  Sum_probs=62.8

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCC-----CcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcch
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLG-----VRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGA  326 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~g-----V~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGa  326 (423)
                      +||||       ++++|++|. ||++|+.+|     |.|+++|++.+...+++|.++.+.  +.+|+|||||||++|||+
T Consensus         2 kvviy-------sk~~Cp~C~~aK~ll~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~tvPqIfi~g~~IGG~   72 (85)
T d1egoa_           2 QTVIF-------GRSGCPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGITKEDLQQKAGK--PVETVPQIFVDQQHIGGY   72 (85)
T ss_dssp             EEEEE-------CCTTSTHHHHHHHHHHHHHHHHSSCEEEEECHHHHTCCSHHHHHHTCC--CSCCSCEEEETTEEEESS
T ss_pred             EEEEE-------eCCCCHhHHHHHHHHHHcCCCCCCceEEEEecCCCHHHHHHHHHHhcC--CCCCCCEEEECCEEEECH
Confidence            69999       789999997 899999865     778898887667778888887753  346999999999999999


Q ss_pred             HHHHHHHHc
Q 045109          327 EEIRRMHEE  335 (423)
Q Consensus       327 DEV~~LhEs  335 (423)
                      +++.+|.+.
T Consensus        73 ~el~~~~~~   81 (85)
T d1egoa_          73 TDFAAWVKE   81 (85)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHh
Confidence            999998763

>d1r7ha_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Corynebacterium ammoniagenes [TaxId: 1697]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin-like NRDH-redoxin
species: Corynebacterium ammoniagenes [TaxId: 1697]

Probab=99.46  E-value=7.4e-14  Score=107.00  Aligned_cols=68  Identities=19%  Similarity=0.269  Sum_probs=57.3

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchH--HH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAE--EI  329 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaD--EV  329 (423)
                      +|+||       +++.|++|. +|++|+.+||.|+++||+.+.+..++++..     +.+++|||||||++|||++  +|
T Consensus         2 ~v~iY-------t~~~C~~C~~ak~~L~~~~i~~~~~~i~~~~~~~~~~~~~-----g~~tvP~i~i~g~~igGf~~d~l   69 (74)
T d1r7ha_           2 SITLY-------TKPACVQCTATKKALDRAGLAYNTVDISLDDEARDYVMAL-----GYVQAPVVEVDGEHWSGFRPERI   69 (74)
T ss_dssp             CEEEE-------ECTTCHHHHHHHHHHHHTTCCCEEEETTTCHHHHHHHHHT-----TCBCCCEEEETTEEEESCCHHHH
T ss_pred             EEEEE-------eCCCChhHHHHHHHHHHcCCceEEEEccCCHHHHHHHHHh-----CCCCcCEEEECCEEEeCCCHhHH
Confidence            58999       678999988 999999999999999999888777776542     3579999999999999984  55


Q ss_pred             HHH
Q 045109          330 RRM  332 (423)
Q Consensus       330 ~~L  332 (423)
                      .+|
T Consensus        70 ~~L   72 (74)
T d1r7ha_          70 KQL   72 (74)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            444

>d1abaa_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin (Grx, thioltransferase)
species: Bacteriophage T4 [TaxId: 10665]

Probab=99.46  E-value=9e-14  Score=110.94  Aligned_cols=77  Identities=21%  Similarity=0.222  Sum_probs=58.9

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCC-----hhhHHHHHHHHcC-CCCCCCCCceEe-CCEEEcc
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMH-----SGFKNELKELLGD-GFSGGGLPRVFV-GKKYIGG  325 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd-----~~~reEL~~lLg~-~tg~~TVPQVFV-dGe~IGG  325 (423)
                      +.||.-+.   +++.|++|. ||++|+.+||.|++++++.+     ...++++.+.++. .++++||||||| ||+||||
T Consensus         2 ~~Iy~~~~---~~~~C~~C~~AK~lL~~~~i~y~~~~i~~~~~~~~~~~~~e~~~~~~~~~~~~~TvPqIfi~dg~~IGG   78 (87)
T d1abaa_           2 FKVYGYDS---NIHKCGPCDNAKRLLTVKKQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVFAPDGSHIGG   78 (87)
T ss_dssp             EEEEECCT---TTSCCHHHHHHHHHHHHTTCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEECTTSCEEES
T ss_pred             EEEEEeCC---CCCCChhHHHHHHHHHHcCCCceeccccccccccCHHHHHHHHHHhcccCCCCceeCeEEecCCcEEEC
Confidence            45783221   234699998 99999999999999998643     3345566666653 467899999999 6999999


Q ss_pred             hHHHHHHH
Q 045109          326 AEEIRRMH  333 (423)
Q Consensus       326 aDEV~~Lh  333 (423)
                      +++|+++.
T Consensus        79 ~del~e~~   86 (87)
T d1abaa_          79 FDQLREYF   86 (87)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHh
Confidence            99998875

>d1h75a_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Glutaredoxin-like NRDH-redoxin
species: Escherichia coli [TaxId: 562]

Probab=99.44  E-value=6.7e-14  Score=108.31  Aligned_cols=69  Identities=19%  Similarity=0.331  Sum_probs=58.5

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcch--HHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGA--EEI  329 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGa--DEV  329 (423)
                      +|+||       ++++|++|. ++++|+.+||.|+++||+.+.+..++++. +    |.+++|+|||||++|||+  |.|
T Consensus         2 ki~iY-------s~~~C~~C~~ak~~L~~~~i~y~~~~i~~~~~~~~~~~~-~----g~~tvP~i~i~~~~i~Gf~~d~i   69 (76)
T d1h75a_           2 RITIY-------TRNDCVQCHATKRAMENRGFDFEMINVDRVPEAAEALRA-Q----GFRQLPVVIAGDLSWSGFRPDMI   69 (76)
T ss_dssp             CEEEE-------ECTTCHHHHHHHHHHHHTTCCCEEEETTTCHHHHHHHHH-T----TCCSSCEEEETTEEEESCCHHHH
T ss_pred             EEEEE-------eCCCCccHHHHHHHHHhcCceeEEEeecCCHHHHHHHHh-c----CCCCCCEEEECCEEEECCCHHHH
Confidence            58999       678999998 89999999999999999988877777654 2    467999999999999997  666


Q ss_pred             HHHH
Q 045109          330 RRMH  333 (423)
Q Consensus       330 ~~Lh  333 (423)
                      .+|+
T Consensus        70 ~~L~   73 (76)
T d1h75a_          70 NRLH   73 (76)
T ss_dssp             GGGS
T ss_pred             HHHh
Confidence            5554

>d1wjka_ c.47.1.1 (A:) Thioredoxin-like structure containing protein C330018D20Rik {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin-like structure containing protein C330018D20Rik
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.03  E-value=2.4e-06  Score=68.51  Aligned_cols=77  Identities=13%  Similarity=0.175  Sum_probs=58.0

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEE--cchH
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYI--GGAE  327 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~I--GGaD  327 (423)
                      -..|++|       .+.+|+.|. ++.+|+.+.+.|..+++..+.+...+|.++.+.     .+|+|||||+.+  |..+
T Consensus        16 ~p~i~lf-------t~~~C~~C~~a~~~L~~~~~~~~~~~v~vd~~~~~~l~~~y~~-----~VPvl~idg~~~~~g~~d   83 (100)
T d1wjka_          16 LPVLTLF-------TKAPCPLCDEAKEVLQPYKDRFILQEVDITLPENSTWYERYKF-----DIPVFHLNGQFLMMHRVN   83 (100)
T ss_dssp             CCEEEEE-------ECSSCHHHHHHHHHTSTTSSSSEEEEEETTSSTTHHHHHHSSS-----SCSEEEESSSEEEESSCC
T ss_pred             CCEEEEE-------ECCCCCChHHHHHHHHHhhhhcceEEEecccccCHHHHHHhcc-----cCCceeecCceEEeCCCC
Confidence            3467888       678999887 899999999998888887777777888888652     389999999664  3444


Q ss_pred             HHHHHHHcCchHHHHcccc
Q 045109          328 EIRRMHEEGQLEKVVEGCE  346 (423)
Q Consensus       328 EV~~LhEsGeL~kLL~~~~  346 (423)
                      +       .+|++.|+.+.
T Consensus        84 ~-------~~L~~~L~~l~   95 (100)
T d1wjka_          84 T-------SKLEKQLRKLS   95 (100)
T ss_dssp             H-------HHHHHHHHSSS
T ss_pred             H-------HHHHHHHHHHh
Confidence            3       25666666543

>d1ttza_ c.47.1.1 (A:) Hypothetical protein XCC2852 {Xanthomonas campestris [TaxId: 339]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Hypothetical protein XCC2852
species: Xanthomonas campestris [TaxId: 339]

Probab=97.38  E-value=0.00045  Score=53.10  Aligned_cols=56  Identities=13%  Similarity=0.110  Sum_probs=42.6

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHH-HhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCC-EEEc
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVIL-KGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGK-KYIG  324 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL-~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdG-e~IG  324 (423)
                      .|+||       ++..|+.|. |+++| +..++.+.++||+.+.    +|.++.+.     .||.|.++| +.+|
T Consensus         1 altLy-------t~~~C~LCe~A~~~l~~~~~~~~~~vdI~~d~----~l~~~y~~-----~IPVl~~~~~~~l~   59 (75)
T d1ttza_           1 ALTLY-------QRDDCHLCDQAVEALAQARAGAFFSVFIDDDA----ALESAYGL-----RVPVLRDPMGRELD   59 (75)
T ss_dssp             CEEEE-------ECSSCHHHHHHHHHHHHTTCCCEEEEECTTCH----HHHHHHTT-----TCSEEECTTCCEEE
T ss_pred             CEEEE-------CCCCccHHHHHHHHHHhccCCcEEEEEccCCH----HHHHHhCC-----eeeEEEECCeeEEc
Confidence            37899       567899887 88876 4568999999998653    67777763     489999976 4445

>d1hyua4 c.47.1.2 (A:103-198) Alkyl hydroperoxide reductase subunit F (AhpF), N-terminal domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: PDI-like
domain: Alkyl hydroperoxide reductase subunit F (AhpF), N-terminal domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.36  E-value=0.00027  Score=55.41  Aligned_cols=60  Identities=22%  Similarity=0.210  Sum_probs=41.4

Q ss_pred             CCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhC-----CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEE
Q 045109          250 GKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGL-----GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYI  323 (423)
Q Consensus       250 ~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~-----gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~I  323 (423)
                      +.-.|++|       ..++|++|. ++.+|+.+     +|.+..+|++.++    ++.+..+    -.++|.+|+||+.+
T Consensus        15 ~~~~i~~F-------~s~~C~~C~~~~p~~~~~a~~~~~i~~~~vd~~~~~----~l~~~~~----I~~vPt~~~ng~~~   79 (96)
T d1hyua4          15 GDFEFETY-------YSLSCHNCPDVVQALNLMAVLNPRIKHTAIDGGTFQ----NEITERN----VMGVPAVFVNGKEF   79 (96)
T ss_dssp             SCEEEEEE-------ECTTCSSHHHHHHHHHHHHHHCTTEEEEEEETTTCH----HHHHHTT----CCSSSEEEETTEEE
T ss_pred             CCeEEEEE-------ECCCCcchHHHHHHHHHHHHhCCceEEEEEecccch----HHHhhcc----cccccEEEECCEEE
Confidence            34457777       347899887 66666543     5788888887553    4444443    45899999999887


Q ss_pred             c
Q 045109          324 G  324 (423)
Q Consensus       324 G  324 (423)
                      +
T Consensus        80 ~   80 (96)
T d1hyua4          80 G   80 (96)
T ss_dssp             E
T ss_pred             E
Confidence            5

>d1g7oa2 c.47.1.5 (A:1-75) Glutaredoxin 2 {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Glutaredoxin 2
species: Escherichia coli [TaxId: 562]

Probab=96.95  E-value=0.0016  Score=49.14  Aligned_cols=62  Identities=15%  Similarity=0.157  Sum_probs=49.2

Q ss_pred             CCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe-CCEEEcchHHHHHH
Q 045109          265 RKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV-GKKYIGGAEEIRRM  332 (423)
Q Consensus       265 RKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV-dGe~IGGaDEV~~L  332 (423)
                      ....||+|. |+.+|..+||.|+.+.+..+  ..+++.++.+    ..+||.+.. ||+.|.....+.+.
T Consensus         5 ~~~~cP~~~rvr~~l~~kgi~~e~~~~~~~--~~~~~~~~~p----~~~VP~L~~~dg~~i~eS~~I~~y   68 (75)
T d1g7oa2           5 IYDHCPYCLKARMIFGLKNIPVELHVLLND--DAETPTRMVG----QKQVPILQKDDSRYMPESMDIVHY   68 (75)
T ss_dssp             ECTTCHHHHHHHHHHHHHTCCCEEEECCTT--TTHHHHHHHS----SSCCCEEEETTTEEEECHHHHHHH
T ss_pred             ccCCCCchHHHHHHHHHhCCCccccccccc--chHHHHHhCC----CCceEEEEEcCCCEEecHHHHHHH
Confidence            456799987 99999999999999988543  3456666543    569999997 67999999888774

>d1oyja2 c.47.1.5 (A:2-85) Class tau GST {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class tau GST
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=96.70  E-value=0.0027  Score=48.94  Aligned_cols=74  Identities=11%  Similarity=0.110  Sum_probs=56.2

Q ss_pred             CCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHH
Q 045109          250 GKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEE  328 (423)
Q Consensus       250 ~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDE  328 (423)
                      .++.++||       .-..|+||. |+-+|..+||.|+.+.+++... .+++.++.. .  ..+||.+..||..|-....
T Consensus         2 ~~~~l~Ly-------~~~~Sp~~~rvr~~L~~kgi~~e~~~v~~~~~-~~~~~~~nP-~--~g~vP~L~~~g~~l~eS~~   70 (84)
T d1oyja2           2 EEKELVLL-------DFWVSPFGQRCRIAMAEKGLEFEYREEDLGNK-SDLLLRSNP-V--HRKIPVLLHAGRPVSESLV   70 (84)
T ss_dssp             CSCCEEEE-------ECTTCHHHHHHHHHHHHHTCCCEEEECCTTSC-CHHHHHHST-T--TCCSCEEEETTEEEESHHH
T ss_pred             CCCceEEE-------cCCCChHHHHHHHHHHHcCCCcEEEEEccCcC-CHHHHhhCC-C--cCcccEEEECCceEEcHHH
Confidence            36789999       456799987 8999999999999999876432 344544432 1  2479999999999999888


Q ss_pred             HHHHHH
Q 045109          329 IRRMHE  334 (423)
Q Consensus       329 V~~LhE  334 (423)
                      +.+..+
T Consensus        71 I~~YL~   76 (84)
T d1oyja2          71 ILQYLD   76 (84)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            877543

>d1z9ha2 c.47.1.5 (A:100-212) Microsomal prostaglandin E synthase-2 {Crab-eating macaque (Macaca fascicularis) [TaxId: 9541]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Microsomal prostaglandin E synthase-2
species: Crab-eating macaque (Macaca fascicularis) [TaxId: 9541]

Probab=96.58  E-value=0.0017  Score=52.22  Aligned_cols=67  Identities=15%  Similarity=0.154  Sum_probs=51.3

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe----CCEEEcchH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV----GKKYIGGAE  327 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV----dGe~IGGaD  327 (423)
                      +++||       +-..||||. ||.+|..+||.|+.++++...  ++++     ...+..+||.+.+    +|+.|+...
T Consensus         2 ~i~LY-------~~~~sP~~~kvr~~L~~k~l~~~~~~v~~~~--~~~~-----~~~~~~~vP~l~~~~~~~g~~i~eS~   67 (113)
T d1z9ha2           2 QLTLY-------QYKTCPFCSKVRAFLDFHALPYQVVEVNPVL--RAEI-----KFSSYRKVPILVAQEGESSQQLNDSS   67 (113)
T ss_dssp             EEEEE-------ECTTCHHHHHHHHHHHHTTCCEEEEECCTTT--CGGG-----TTCSCCSSCEEEEEETTEEEEECSHH
T ss_pred             EEEEE-------cCCCChHHHHHHHHHHHcCCeeEEeccCccc--chhh-----ccCccccccccccccCCCceEeecHH
Confidence            47899       667899987 999999999999999997432  2232     1235679999875    358999999


Q ss_pred             HHHHHH
Q 045109          328 EIRRMH  333 (423)
Q Consensus       328 EV~~Lh  333 (423)
                      .+.+..
T Consensus        68 ~Ii~YL   73 (113)
T d1z9ha2          68 VIISAL   73 (113)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            987743

>d1gwca2 c.47.1.5 (A:4-86) Class tau GST {Aegilops tauschii, also known as Triticum tauschii [TaxId: 37682]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class tau GST
species: Aegilops tauschii, also known as Triticum tauschii [TaxId: 37682]

Probab=96.38  E-value=0.006  Score=45.75  Aligned_cols=71  Identities=10%  Similarity=0.026  Sum_probs=53.6

Q ss_pred             CcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHH
Q 045109          252 EKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIR  330 (423)
Q Consensus       252 ~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~  330 (423)
                      +.+.||       ...+|++|. |+-+|..+||.|+.+.+++... .+++.++..   ....+|.+..+|..|.....+.
T Consensus         2 ~~mkLy-------~~~~sp~~~rvr~~l~~kgi~~e~~~v~~~~~-~~~~~~~~~---~~~~~p~l~~dg~~i~eS~~I~   70 (83)
T d1gwca2           2 DDLKLL-------GAWPSPFVTRVKLALALKGLSYEDVEEDLYKK-SELLLKSNP---VHKKIPVLIHNGAPVCESMIIL   70 (83)
T ss_dssp             CCEEEE-------ECTTCHHHHHHHHHHHHHTCCCEEEECCTTSC-CHHHHHHST---TTCCSCEEEETTEEEESHHHHH
T ss_pred             CeEEEE-------ecCCChHHHHHHHHHHHCCCCeEEEEEeccch-hHHHHHHHh---ccCCCceeecCCceEcCHHHHH
Confidence            357789       446799987 9999999999999999975432 234444432   1347899999999999999887


Q ss_pred             HHH
Q 045109          331 RMH  333 (423)
Q Consensus       331 ~Lh  333 (423)
                      +..
T Consensus        71 ~YL   73 (83)
T d1gwca2          71 QYI   73 (83)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            753

>d1eema2 c.47.1.5 (A:5-102) Class omega GST {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class omega GST
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.26  E-value=0.0062  Score=48.04  Aligned_cols=74  Identities=12%  Similarity=0.125  Sum_probs=55.3

Q ss_pred             hcCCCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe-CCEEEcc
Q 045109          248 KCGKEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV-GKKYIGG  325 (423)
Q Consensus       248 li~~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV-dGe~IGG  325 (423)
                      .+..+++.||       .-.+|++|. |+-+|..+||.|+.+.|++.. ..+++.+    .....+||.+.. +|..|..
T Consensus        14 ~~~~~~~~Ly-------~~~~sP~~~rv~~~l~~kgi~~e~~~v~~~~-~~~~~~~----~nP~g~VPvL~~~dg~~i~e   81 (98)
T d1eema2          14 PVPEGSIRIY-------SMRFCPFAERTRLVLKAKGIRHEVININLKN-KPEWFFK----KNPFGLVPVLENSQGQLIYE   81 (98)
T ss_dssp             CCCTTCEEEE-------ECTTCHHHHHHHHHHHHTTCCEEEEEBCTTS-CCGGGGG----TCTTCCSCEEEETTCCEEES
T ss_pred             CCCCCcEEEE-------cCCCChHHHHHHHHHHHhCCCCEEEEecccC-CcHHHHh----hhccccceeEEeCCCCEEcC
Confidence            4567889999       456899987 999999999999999987542 1223332    234568999988 4788988


Q ss_pred             hHHHHHHH
Q 045109          326 AEEIRRMH  333 (423)
Q Consensus       326 aDEV~~Lh  333 (423)
                      ...+.+..
T Consensus        82 S~aI~~YL   89 (98)
T d1eema2          82 SAITCEYL   89 (98)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            88877643

>d1e6ba2 c.47.1.5 (A:8-87) Class zeta GST {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class zeta GST
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.26  E-value=0.0084  Score=45.25  Aligned_cols=70  Identities=23%  Similarity=0.349  Sum_probs=52.2

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChh-h-HHHHHHHHcCCCCCCCCCceEeCCEEEcchHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSG-F-KNELKELLGDGFSGGGLPRVFVGKKYIGGAEEI  329 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~-~-reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV  329 (423)
                      ++.||       ....|++|. |+-+|+.+||.|+.+.|++... . ..++.+ +.   ...+||.+..+|..|-....+
T Consensus         1 ~m~Ly-------~~~~sp~~~kv~~~L~~~gi~~~~~~i~~~~~~~~~~~~~~-~~---p~~~vPvL~~~~~~l~eS~aI   69 (80)
T d1e6ba2           1 KLKLY-------SYWRSSCAHRVRIALALKGLDYEYIPVNLLKGDQFDSDFKK-IN---PMGTVPALVDGDVVINDSFAI   69 (80)
T ss_dssp             CCEEE-------ECTTCHHHHHHHHHHHHTTCCCEEEECCTTTTGGGCHHHHH-HC---TTCCSSEEEETTEEEESHHHH
T ss_pred             CEEEE-------eCCCChHHHHHHHHHHHhCCCCEEEEEeccccccccHHHhh-cC---ccccCCEEEECCEEEECHHHH
Confidence            45688       566799877 8999999999999998875432 2 234443 32   245899999999999888888


Q ss_pred             HHHH
Q 045109          330 RRMH  333 (423)
Q Consensus       330 ~~Lh  333 (423)
                      .+..
T Consensus        70 ~~yL   73 (80)
T d1e6ba2          70 IMYL   73 (80)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7643

>d1fw1a2 c.47.1.5 (A:5-87) Class zeta GST {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class zeta GST
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.12  E-value=0.0033  Score=48.01  Aligned_cols=69  Identities=16%  Similarity=0.239  Sum_probs=50.8

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChh----hHHHHHHHHcCCCCCCCCCceEeCCEEEcchHH
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSG----FKNELKELLGDGFSGGGLPRVFVGKKYIGGAEE  328 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~----~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDE  328 (423)
                      -|||       .-..++||. |+-+|..+|+.|+.+.|++...    ...++.++-    ...+||.+..||..|.....
T Consensus         2 piLY-------~~~~S~~s~rvr~~L~ekgi~~e~~~v~l~~~~~~~~~~~~~~~n----P~g~vP~L~~~g~~i~eS~a   70 (83)
T d1fw1a2           2 PILY-------SYFRSSCSWRVRIALALKGIDYKTVPINLIKDGGQQFSKDFQALN----PMKQVPTLKIDGITIHQSLA   70 (83)
T ss_dssp             CEEE-------ECTTCHHHHHHHHHHHHTTCCCEEEECCSSTTSCGGGSHHHHHHC----TTCCSCEEEETTEEEESHHH
T ss_pred             CEEE-------cCCCChHHHHHHHHHHHhCCCCEEEeccccccccccCCHHHHHhc----cCCccCEEEECCEEEecHHH
Confidence            3688       445688876 8999999999999888765332    224554432    24589999999999998888


Q ss_pred             HHHHH
Q 045109          329 IRRMH  333 (423)
Q Consensus       329 V~~Lh  333 (423)
                      +.+..
T Consensus        71 I~~yL   75 (83)
T d1fw1a2          71 IIEYL   75 (83)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87743

>d1k0ma2 c.47.1.5 (A:6-91) Chloride intracellular channel 1 (clic1) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Chloride intracellular channel 1 (clic1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.82  E-value=0.018  Score=44.37  Aligned_cols=75  Identities=15%  Similarity=0.237  Sum_probs=54.9

Q ss_pred             EEEEEeCC-CCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHH
Q 045109          254 LVVYFTSL-RGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRR  331 (423)
Q Consensus       254 VVIYtTSL-rGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~  331 (423)
                      +.||..+- .|-+...||+|. |+-+|..+||.|+.+.|++.. ..+++.++.    ...+||.+..||..|.....+.+
T Consensus         3 i~l~~ka~~dg~~~~~cPf~~rv~~~L~~kgi~~~~~~v~~~~-~~~~~~~~n----P~~~vPvL~~~~~~i~eS~~I~~   77 (86)
T d1k0ma2           3 VELFVKAGSDGAKIGNCPFSQRLFMVLWLKGVTFNVTTVDTKR-RTETVQKLC----PGGELPFLLYGTEVHTDTNKIEE   77 (86)
T ss_dssp             EEEEEEBCTTSSSBCSCHHHHHHHHHHHHHTCCCEEEEECTTS-CCHHHHHHC----TTCCSSEEEETTEEEECHHHHHH
T ss_pred             EEEEEecCCCcCcCCCCHhHHHHHHHHHHHCCCcEEEEeeccc-ccHHHHHHh----ccCceeEEEEcccccccHHHHHH
Confidence            55664432 233445799887 999999999999999987642 234555543    24589999999999999988877


Q ss_pred             HH
Q 045109          332 MH  333 (423)
Q Consensus       332 Lh  333 (423)
                      ..
T Consensus        78 YL   79 (86)
T d1k0ma2          78 FL   79 (86)
T ss_dssp             HH
T ss_pred             HH
Confidence            53

>d1v2aa2 c.47.1.5 (A:1-83) Class delta GST {Mosquito (Anopheles dirus b), isozyme 1-6 [TaxId: 123217]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class delta GST
species: Mosquito (Anopheles dirus b), isozyme 1-6 [TaxId: 123217]

Probab=95.63  E-value=0.026  Score=42.57  Aligned_cols=64  Identities=14%  Similarity=0.233  Sum_probs=48.9

Q ss_pred             CCCCCcHHH-HHHHHHhCCCcEEEEECCCChh-hHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHHH
Q 045109          265 RKTYEDCCH-VRVILKGLGVRVDERDLSMHSG-FKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRM  332 (423)
Q Consensus       265 RKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~-~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~L  332 (423)
                      ....|++|+ |+.+|+.+||.|+.+.|+.... .++++.++ .   ...+||.+..+|..|-....+.+.
T Consensus         5 ~~~~Sp~~~~v~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~-n---P~g~VP~L~~~g~~l~eS~aI~~Y   70 (83)
T d1v2aa2           5 YSLISPPCQSAILLAKKLGITLNLKKTNVHDPVERDALTKL-N---PQHTIPTLVDNGHVVWESYAIVLY   70 (83)
T ss_dssp             ECTTCHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH-C---TTCCSCEEEETTEEEESHHHHHHH
T ss_pred             CCCCChHHHHHHHHHHHhCCCceEEEEeCCCCcchHHHHHH-h---hccCCCEEEEccceeEcHHHHHHH
Confidence            446789887 8999999999999999875433 34455443 2   345999999999999988888774

>d1aw9a2 c.47.1.5 (A:2-82) Class phi GST {Maize (Zea mays), type III [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class phi GST
species: Maize (Zea mays), type III [TaxId: 4577]

Probab=95.36  E-value=0.0086  Score=45.29  Aligned_cols=69  Identities=16%  Similarity=0.230  Sum_probs=51.5

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChh--hHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSG--FKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEI  329 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~--~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV  329 (423)
                      ++.||       ....|++|. |+-+|..+||.|+.+.|++...  ...++.+    .....+||.+..+|..|.....+
T Consensus         2 pm~Ly-------~~~~sp~~~~v~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~----~nP~g~vP~L~~~~~~l~eS~aI   70 (81)
T d1aw9a2           2 PLKLY-------GMPLSPNVVRVATVLNEKGLDFEIVPVDLTTGAHKQPDFLA----LNPFGQIPALVDGDEVLFESRAI   70 (81)
T ss_dssp             CEEEE-------SCTTCHHHHHHHHHHHHTTCCEEEECCCSSTTSSCCCSGGG----TCTTCCSCEEEETTEEEESHHHH
T ss_pred             CEEEE-------eCCCChhHHHHHHHHHhcCCCCEEEEecCCCcchhhHHHHH----HhhcCeeEEEEECCcEEECHHHH
Confidence            47789       556798876 8999999999999998875432  1223322    23356899999999999988888


Q ss_pred             HHH
Q 045109          330 RRM  332 (423)
Q Consensus       330 ~~L  332 (423)
                      .+.
T Consensus        71 ~~Y   73 (81)
T d1aw9a2          71 NRY   73 (81)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>d1k0da2 c.47.1.5 (A:109-200) Yeast prion protein ure2p, nitrogen regulation fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Yeast prion protein ure2p, nitrogen regulation fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.29  E-value=0.031  Score=43.15  Aligned_cols=71  Identities=15%  Similarity=0.142  Sum_probs=52.3

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhh-H-HHHHHHHcCCCCCCCCCceEe---CCEEEc
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGF-K-NELKELLGDGFSGGGLPRVFV---GKKYIG  324 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~-r-eEL~~lLg~~tg~~TVPQVFV---dGe~IG  324 (423)
                      ...+.||       ....|++|. |+-+|+.+|+.|+.+.|++.... + .++.+    .....+||.+..   +|..|.
T Consensus         3 ~~~~tLY-------~~~~sp~~~kV~~~L~e~gi~ye~~~v~~~~~~~~~~~~~~----~np~g~vP~L~d~~~~~~~l~   71 (92)
T d1k0da2           3 LEGYTLF-------SHRSAPNGFKVAIVLSELGFHYNTIFLDFNLGEHRAPEFVS----VNPNARVPALIDHGMDNLSIW   71 (92)
T ss_dssp             SSSEEEE-------ECTTCHHHHHHHHHHHHTTCCEEEEECCTTTTGGGSHHHHT----TCTTCCSCEEEEGGGTTEEEE
T ss_pred             CCceEEe-------eCCCCccHHHHHHHHHHcCCCCEEEEeeccCCcccCHHHHH----HhhccccceeEEecccceEEc
Confidence            3568899       566798876 99999999999999998765432 2 23332    334568999986   788888


Q ss_pred             chHHHHHH
Q 045109          325 GAEEIRRM  332 (423)
Q Consensus       325 GaDEV~~L  332 (423)
                      ....+.+.
T Consensus        72 ES~aI~~Y   79 (92)
T d1k0da2          72 ESGAILLH   79 (92)
T ss_dssp             SHHHHHHH
T ss_pred             CHHHHHHH
Confidence            87777664

>d1r5aa2 c.47.1.5 (A:2-86) Class delta GST {Mosquito (Anopheles dirus b), isozyme 1-5 [TaxId: 123217]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class delta GST
species: Mosquito (Anopheles dirus b), isozyme 1-5 [TaxId: 123217]

Probab=94.73  E-value=0.052  Score=41.27  Aligned_cols=68  Identities=21%  Similarity=0.201  Sum_probs=50.7

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChh-h-HHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHH
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSG-F-KNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIR  330 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~-~-reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~  330 (423)
                      +|||       ....+++|+ |+-+|+.+|+.|+.+.|+.... . ..++.+    .....+||.+-.||..|.....+.
T Consensus         2 ~iLY-------~~~~S~~~~~v~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~----~nP~g~vP~L~~~~~~l~ES~aI~   70 (85)
T d1r5aa2           2 TVLY-------YLPASPPCRSVLLLAKMIGVELDLKVLNIMEGEQLKPDFVE----LNPQHCIPTMDDHGLVLWESRVIL   70 (85)
T ss_dssp             EEEE-------ECTTCHHHHHHHHHHHHTTCCEEEEECCTTTTGGGSHHHHT----TCTTCCSSEEEETTEEEECHHHHH
T ss_pred             EEEE-------cCCCCHhHHHHHHHHHHcCCCCEEEEecCCCcccCCHHHHH----HHhcCCCCEEEEcccceecHHHHH
Confidence            6899       456788876 8999999999999999875432 2 234433    223458999999999999888877


Q ss_pred             HH
Q 045109          331 RM  332 (423)
Q Consensus       331 ~L  332 (423)
                      +.
T Consensus        71 ~Y   72 (85)
T d1r5aa2          71 SY   72 (85)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>d1ljra2 c.47.1.5 (A:1-79) Class theta GST {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class theta GST
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.65  E-value=0.039  Score=40.95  Aligned_cols=65  Identities=18%  Similarity=0.166  Sum_probs=47.6

Q ss_pred             CCCCCcHHH-HHHHHHhCCCcEEEEECCCChhh--HHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHHHH
Q 045109          265 RKTYEDCCH-VRVILKGLGVRVDERDLSMHSGF--KNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRMH  333 (423)
Q Consensus       265 RKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~--reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~Lh  333 (423)
                      ....+++|+ |+-+|+.+|+.|+.+.|+.....  ..++.+    ......+|.+-.+|..|-....+.+..
T Consensus         7 ~~~~sp~~r~v~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~----~np~g~vP~L~d~~~~l~ES~aI~~yL   74 (79)
T d1ljra2           7 LDLVSQPSRAVYIFAKKNGIPLELRTVDLVKGQHKSKEFLQ----INSLGKLPTLKDGDFILTESSAILIYL   74 (79)
T ss_dssp             ECTTSHHHHHHHHHHHHTTCCCEEEECCTTTTGGGSHHHHT----TCTTCCSCEEEETTEEEECHHHHHHHH
T ss_pred             eCCCChHHHHHHHHHHHhCCCCEEEeeeccccccCCHHHHH----hhhhcceeEEEeCCcEEEcHHHHHHHH
Confidence            446788877 89999999999999998755432  223332    334568999999999998888776643

>d1axda2 c.47.1.5 (A:1-80) Class phi GST {Maize (Zea mays), type I [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class phi GST
species: Maize (Zea mays), type I [TaxId: 4577]

Probab=94.31  E-value=0.055  Score=40.64  Aligned_cols=70  Identities=13%  Similarity=0.093  Sum_probs=51.3

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhh--HHHHHHHHcCCCCCCCCCceEeCCEEEcchHHH
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGF--KNELKELLGDGFSGGGLPRVFVGKKYIGGAEEI  329 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~--reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV  329 (423)
                      ++.||       ....++++. |+-+|+.+|+.|+.+.|++....  ..++.+    .....+||.+-.||..|.....+
T Consensus         2 p~~Ly-------~~~~S~~~~kv~~~L~e~gi~~e~~~v~~~~~~~~~~~~~~----~nP~g~VP~L~~~~~~l~ES~aI   70 (80)
T d1axda2           2 PMKLY-------GAVMSWNLTRCATALEEAGSDYEIVPINFATAEHKSPEHLV----RNPFGQVPALQDGDLYLFESRAI   70 (80)
T ss_dssp             CEEEE-------SCTTCTTHHHHHHHHHHHTCCEEEECCCTTTTGGGSHHHHT----TCTTCCSCEEEETTEEEESHHHH
T ss_pred             CEEEE-------ECCCChHHHHHHHHHHHcCCCCEEEEecCCccchhhHHHHH----hhccccCCEEEECCEEEECHHHH
Confidence            47789       555677665 99999999999999998765432  233333    23346899999999988888887


Q ss_pred             HHHH
Q 045109          330 RRMH  333 (423)
Q Consensus       330 ~~Lh  333 (423)
                      .+..
T Consensus        71 ~~YL   74 (80)
T d1axda2          71 CKYA   74 (80)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7643

>d1gnwa2 c.47.1.5 (A:2-85) Class phi GST {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class phi GST
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.52  E-value=0.074  Score=40.21  Aligned_cols=68  Identities=13%  Similarity=0.134  Sum_probs=49.2

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhh--HHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHH
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGF--KNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIR  330 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~--reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~  330 (423)
                      +-||       ....|++|. |+-+|+.+|+.|+.+.|++....  ..++.+    .....+||.+..+|..|-....+.
T Consensus         2 ~kLY-------~~~~s~~~~~v~~~l~e~gl~~e~~~v~~~~~~~~~~~~~~----~nP~g~vP~L~~~~~~l~ES~aI~   70 (84)
T d1gnwa2           2 IKVF-------GHPASIATRRVLIALHEKNLDFELVHVELKDGEHKKEPFLS----RNPFGQVPAFEDGDLKLFESRAIT   70 (84)
T ss_dssp             EEEE-------ECTTCHHHHHHHHHHHHTTCCCEEEECCGGGTGGGSTTGGG----TCTTCCSCEEEETTEEEECHHHHH
T ss_pred             eEEE-------eCCCChHHHHHHHHHHHcCCCcEeecccCCcccccHHHHHH----HhhcCcceEEEECCcEEecHHHHH
Confidence            4578       456788886 89999999999999988754321  123322    233468999999999998877776


Q ss_pred             HH
Q 045109          331 RM  332 (423)
Q Consensus       331 ~L  332 (423)
                      +.
T Consensus        71 ~Y   72 (84)
T d1gnwa2          71 QY   72 (84)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>d1z3ea1 c.47.1.12 (A:1-114) Regulatory protein Spx {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: ArsC-like
domain: Regulatory protein Spx
species: Bacillus subtilis [TaxId: 1423]

Probab=93.37  E-value=0.063  Score=42.99  Aligned_cols=46  Identities=20%  Similarity=0.290  Sum_probs=39.1

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcC
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGD  306 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~  306 (423)
                      |.||       ..+.|+-|+ ++++|+.+||.|+.+|+-.++--.+||.+++..
T Consensus         2 i~ly-------~~~~C~~~rka~~~L~~~~i~~~~~d~~~~p~s~~eL~~ll~~   48 (114)
T d1z3ea1           2 VTLY-------TSPSCTSCRKARAWLEEHEIPFVERNIFSEPLSIDEIKQILRM   48 (114)
T ss_dssp             EEEE-------ECTTCHHHHHHHHHHHHTTCCEEEEETTTSCCCHHHHHHHHHT
T ss_pred             EEEE-------cCCCCHHHHHHHHHHHHCCCCeEEEeeeccCCCHHHHHHHHHH
Confidence            5788       456798766 999999999999999998777778899998863

>d1rw1a_ c.47.1.12 (A:) Hypothetical protein PA3664 (YffB) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: ArsC-like
domain: Hypothetical protein PA3664 (YffB)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.53  E-value=0.039  Score=44.11  Aligned_cols=45  Identities=20%  Similarity=0.138  Sum_probs=36.1

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHc
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLG  305 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg  305 (423)
                      |+||       ..+.|.-|+ ++++|+..||.|+.+|+-.++--.+||.+++.
T Consensus         2 ~~iY-------~~p~Cs~srka~~~L~~~~i~~~~idy~k~pls~~eL~~ll~   47 (114)
T d1rw1a_           2 YVLY-------GIKACDTMKKARTWLDEHKVAYDFHDYKAVGIDREHLRRWCA   47 (114)
T ss_dssp             EEEE-------ECSSCHHHHHHHHHHHHTTCCEEEEEHHHHCCCHHHHHHHHH
T ss_pred             EEEE-------ECCCChHHHHHHHHHHHcCCCeEEEEccccCCCHHHHHHHHH
Confidence            7899       456798776 99999999999999998655555677777765

>d1nhoa_ c.47.1.1 (A:) MTH807, thioredoxin/glutaredoxin-like protein {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: MTH807, thioredoxin/glutaredoxin-like protein
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=92.28  E-value=0.096  Score=38.95  Aligned_cols=59  Identities=12%  Similarity=0.344  Sum_probs=39.0

Q ss_pred             cEEEEEeCCCCCCCCCCcHHH-HHHHHH----hCC--CcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCC--EEE
Q 045109          253 KLVVYFTSLRGIRKTYEDCCH-VRVILK----GLG--VRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGK--KYI  323 (423)
Q Consensus       253 kVVIYtTSLrGIRKT~c~Cc~-VK~LL~----~~g--V~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdG--e~I  323 (423)
                      +|++|       ..++|+.|. ++.+|+    .++  |.+...|++.+++    |.+    ..+-..+|.++++|  +++
T Consensus         4 ~v~~F-------~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~d~~~~----l~~----~~~V~~~Pt~~~~~~~~~~   68 (85)
T d1nhoa_           4 NIEVF-------TSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDRE----KAI----EYGLMAVPAIAINGVVRFV   68 (85)
T ss_dssp             CEEEE-------SCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCGG----GGG----GTCSSCSSEEEETTTEEEE
T ss_pred             EEEEE-------ECCCCcchHHHHHHHhhhcccccccccccccccccchh----hHH----hcCceEeCEEEECCcEEEE
Confidence            47778       568998876 554444    444  7788888865543    322    23456899999998  567


Q ss_pred             cch
Q 045109          324 GGA  326 (423)
Q Consensus       324 GGa  326 (423)
                      |..
T Consensus        69 G~~   71 (85)
T d1nhoa_          69 GAP   71 (85)
T ss_dssp             CSS
T ss_pred             cCC
Confidence            753

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

Probab=92.19  E-value=0.045  Score=41.52  Aligned_cols=52  Identities=27%  Similarity=0.604  Sum_probs=36.4

Q ss_pred             CccccccCccc------eEeCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCcc---cCCCCC
Q 045109          356 VGACEACGDVR------FVPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLT---RCPICC  422 (423)
Q Consensus       356 ~~~C~~CGG~r------fVpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLi---rCp~C~  422 (423)
                      ...|..|.|.+      ...|..|+|+-++.....               .-.....|+.||=.|.+   +|+.|.
T Consensus        11 ~~~C~~C~G~G~~~g~~~~~C~~C~G~G~v~~~~g---------------~~~~~~~C~~C~G~G~~i~~~C~~C~   71 (79)
T d1exka_          11 LEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQG---------------FFAVQQTCPHCQGRGTLIKDPCNKCH   71 (79)
T ss_dssp             EEECGGGTTTSBCSSSCCEECTTTTTSSEEEEEET---------------TEEEEEECTTTTTSSEECSSBCGGGT
T ss_pred             eccCCCCcCcccCCCccceeCCCccceeEEEEecc---------------cceeeEECcccCcceeECCCCCCCCC
Confidence            34589998765      477999999987765421               01124579999999976   788873

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.70  E-value=0.039  Score=41.48  Aligned_cols=54  Identities=22%  Similarity=0.509  Sum_probs=33.0

Q ss_pred             cccccCccce-----EeCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCcc-----cCCCCC
Q 045109          358 ACEACGDVRF-----VPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLT-----RCPICC  422 (423)
Q Consensus       358 ~C~~CGG~rf-----VpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLi-----rCp~C~  422 (423)
                      .|..|.|.+.     -.|..|+|+-+++.....       +.    ........|+.|+=.|.+     +|+.|.
T Consensus         4 ~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~-------g~----~~~~~~~~C~~C~G~G~~i~~~~~C~~C~   67 (74)
T d1nlta3           4 LCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQM-------GP----MIQRFQTECDVCHGTGDIIDPKDRCKSCN   67 (74)
T ss_dssp             ECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEES-------SS----EEEEEECSCTTCSSSSSCCCTTSBCSSST
T ss_pred             CCcCCcccccCCCCCCCCCCCcceeeeeEEEEe-------cC----cEEEEEEECccCccceEEeCCCCCCCCCC
Confidence            4777877764     348888888766543110       00    001123579999988865     588883

>d1jlva2 c.47.1.5 (A:1-84) Class delta GST {Mosquito (Anopheles dirus b), isozyme 1-3 [TaxId: 123217]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class delta GST
species: Mosquito (Anopheles dirus b), isozyme 1-3 [TaxId: 123217]

Probab=90.69  E-value=0.19  Score=37.91  Aligned_cols=64  Identities=14%  Similarity=0.202  Sum_probs=47.1

Q ss_pred             CCCCCcHHH-HHHHHHhCCCcEEEEECCCChh--hHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHHH
Q 045109          265 RKTYEDCCH-VRVILKGLGVRVDERDLSMHSG--FKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRM  332 (423)
Q Consensus       265 RKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~--~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~L  332 (423)
                      .-..+++|+ |+-+|+.+||.|+.+.|+....  ...++.++ .   ...+||.+-.+|..|-....+.+.
T Consensus         5 ~~~~S~~~~~v~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~-n---P~g~vP~L~d~~~~l~ES~aI~~y   71 (84)
T d1jlva2           5 YLPGSAPCRAVQMTAAAVGVELNLKLTNLMAGEHMKPEFLKI-N---PQHCIPTLVDNGFALWESRAICTY   71 (84)
T ss_dssp             ECTTCHHHHHHHHHHHHTTCCCEEEECCGGGTGGGSHHHHHH-C---TTCCSCEEEETTEEEESHHHHHHH
T ss_pred             cCCCCHHHHHHHHHHHHcCCCCEEEEecCCCCccCCHHHHHH-h---ccccCCEEEECCEEEEcHHHHHHH
Confidence            446688876 8999999999999999875332  23355543 2   245899999999988887777664

>d1thxa_ c.47.1.1 (A:) Thioredoxin {Anabaena sp., pcc 7120 [TaxId: 1167]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin
species: Anabaena sp., pcc 7120 [TaxId: 1167]

Probab=89.52  E-value=0.93  Score=34.32  Aligned_cols=67  Identities=12%  Similarity=0.287  Sum_probs=39.9

Q ss_pred             HHHhhhcCC-CcEEEEEeCCCCCCCCCCcHHH-HHHHHH----hCC--CcEEEEECCCChhhHHHHHHHHcCCCCCCCCC
Q 045109          243 AVLDHKCGK-EKLVVYFTSLRGIRKTYEDCCH-VRVILK----GLG--VRVDERDLSMHSGFKNELKELLGDGFSGGGLP  314 (423)
Q Consensus       243 ~~v~~li~~-~kVVIYtTSLrGIRKT~c~Cc~-VK~LL~----~~g--V~yeErDVsmd~~~reEL~~lLg~~tg~~TVP  314 (423)
                      ++-+..+.. ..|+|+++      .++|+.|. ++.+|+    .++  +.+-.+|++.++    +|.+.++    -..+|
T Consensus        11 ~f~~~v~~~~~~vlv~f~------a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~d~~~----~l~~~~~----I~~~P   76 (108)
T d1thxa_          11 EFESEVLKAEQPVLVYFW------ASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNP----TTVKKYK----VEGVP   76 (108)
T ss_dssp             GHHHHTTTCSSCEEEEEE------CTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCH----HHHHHTT----CCSSS
T ss_pred             HHHHHHHhCCCcEEEEEE------CCCCCCccccchHHHHHHHhcCCcceeceecccccH----HHHHHhc----ccCCC
Confidence            333334444 45777654      47898776 555554    343  677788887553    4545554    35789


Q ss_pred             ceEe--CCEEE
Q 045109          315 RVFV--GKKYI  323 (423)
Q Consensus       315 QVFV--dGe~I  323 (423)
                      .+++  +|+.+
T Consensus        77 t~~~~~~g~~v   87 (108)
T d1thxa_          77 ALRLVKGEQIL   87 (108)
T ss_dssp             EEEEEETTEEE
T ss_pred             EEEEEECCEEE
Confidence            8776  88633

>d1okta2 c.47.1.5 (A:1-85) Pf GST {Malarial parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Pf GST
species: Malarial parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=89.03  E-value=1.1  Score=32.94  Aligned_cols=76  Identities=18%  Similarity=0.344  Sum_probs=52.0

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHHHHHHHHhCCCcEEEEECCCChhhHHHHHHH-HcCCCCCCCCCceEeCCEEEcchHHH
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCHVRVILKGLGVRVDERDLSMHSGFKNELKEL-LGDGFSGGGLPRVFVGKKYIGGAEEI  329 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~VK~LL~~~gV~yeErDVsmd~~~reEL~~l-Lg~~tg~~TVPQVFVdGe~IGGaDEV  329 (423)
                      ..+|++|+-.++|-      +..+|-+|...||.|+.+.++.+.....+.... .........+|.+-.+|..|.-...+
T Consensus         2 ~~~i~L~Y~~~~gr------~e~irl~L~~~gi~ye~~~~~~~~~~~~~~~~~~~~~~~p~g~lP~l~~~g~~l~eS~AI   75 (85)
T d1okta2           2 GDNIVLYYFDARGK------AELIRLIFAYLGIEYTDKRFGVNGDAFVEFKNFKKEKDTPFEQVPILQIGDLILAQSQAI   75 (85)
T ss_dssp             CCCEEEEEESSSTT------THHHHHHHHHHTCCCEEEEETSSSCHHHHHHHHHHHSCCSSSCSCEEEETTEEEECHHHH
T ss_pred             CCCeEEEEcCCchh------hHHHHHHHHHcCCCceEEEEcccccchhhhhhhhhcccccCCCCCeeecCCCEEecHHHH
Confidence            35788876656551      235899999999999998887655443333322 12222346899999999999888877


Q ss_pred             HHH
Q 045109          330 RRM  332 (423)
Q Consensus       330 ~~L  332 (423)
                      .+.
T Consensus        76 ~~y   78 (85)
T d1okta2          76 VRY   78 (85)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            663

>d2a2ra2 c.47.1.5 (A:1-77) Class pi GST {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class pi GST
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.77  E-value=0.85  Score=33.09  Aligned_cols=58  Identities=21%  Similarity=0.209  Sum_probs=41.0

Q ss_pred             HHHHHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHHH
Q 045109          271 CCHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRM  332 (423)
Q Consensus       271 Cc~VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~L  332 (423)
                      |..+|-+|...||+|+...++....  ..........  ...||.+-.||..|.....+.+.
T Consensus        14 ~~~vr~~L~~~gi~ye~~~v~~~~~--~~~~~~~~~p--~g~vP~L~~~g~~i~eS~aI~~y   71 (77)
T d2a2ra2          14 CAALRMLLADQGQSWKEEVVTVETW--QEGSLKASCL--YGQLPKFQDGDLTLYQSNTILRH   71 (77)
T ss_dssp             GHHHHHHHHHTTCCEEEEECCHHHH--HHSHHHHHST--TSCSCEEEETTEEEECHHHHHHH
T ss_pred             HHHHHHHHHHcCCCcEEEEeccccc--ccccccccCC--CCCCCEEEECCEeeecHHHHHHH
Confidence            3458999999999999999864322  2212111112  24799999999999988888764

>d1a8la2 c.47.1.2 (A:120-226) Protein disulfide isomerase, PDI {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: PDI-like
domain: Protein disulfide isomerase, PDI
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=87.99  E-value=0.38  Score=36.38  Aligned_cols=53  Identities=9%  Similarity=0.122  Sum_probs=31.5

Q ss_pred             CCCCcHHH-HHHHHHhC----------CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CC----EEEcch
Q 045109          266 KTYEDCCH-VRVILKGL----------GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GK----KYIGGA  326 (423)
Q Consensus       266 KT~c~Cc~-VK~LL~~~----------gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dG----e~IGGa  326 (423)
                      .++|+.|. ++.+|..+          .|.+..+|++..    .+|.+.++    -..+|.++|  +|    +++|..
T Consensus        24 a~wC~~C~~~~p~~~~la~~~~~~~~~~v~~~~id~~~~----~~l~~~~~----V~~vPTi~i~~~G~~~~~~~G~~   93 (107)
T d1a8la2          24 TPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEY----PEWADQYN----VMAVPKIVIQVNGEDRVEFEGAY   93 (107)
T ss_dssp             CSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGC----HHHHHHTT----CCSSCEEEEEETTEEEEEEESCC
T ss_pred             cCccccchhhChhHHhhhhhhhhccCCcEEEEEeccccc----cccccccc----cccceEEEEEeCCeEEEEEECCC
Confidence            47999887 56555432          356677777533    25555554    346777765  55    455653

>d1ep7a_ c.47.1.1 (A:) Thioredoxin {Chlamydomonas reinhardtii [TaxId: 3055]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin
species: Chlamydomonas reinhardtii [TaxId: 3055]

Probab=87.81  E-value=1.5  Score=33.69  Aligned_cols=59  Identities=19%  Similarity=0.274  Sum_probs=36.3

Q ss_pred             CCcEEEEEeCCCCCCCCCCcHHH-HH----HHHHhCC--CcEEEEECCCChhhHHHHHHHHcCCCCCCCCCce--EeCCE
Q 045109          251 KEKLVVYFTSLRGIRKTYEDCCH-VR----VILKGLG--VRVDERDLSMHSGFKNELKELLGDGFSGGGLPRV--FVGKK  321 (423)
Q Consensus       251 ~~kVVIYtTSLrGIRKT~c~Cc~-VK----~LL~~~g--V~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQV--FVdGe  321 (423)
                      ...|||+++      .+||+.|. ++    ++-..++  |.|-.+|++..+    ++.+.++    -..+|.+  |-+|+
T Consensus        24 ~k~vvv~f~------a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~d~~~----~l~~~~~----v~~~Pt~~~~~~G~   89 (112)
T d1ep7a_          24 HKPIVVDFT------ATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVA----AVAEAAG----ITAMPTFHVYKDGV   89 (112)
T ss_dssp             TCCEEEEEE------CTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTH----HHHHHHT----CCBSSEEEEEETTE
T ss_pred             CCeEEEEEE------cCCcCCCcccchhhhhhhhcccceEEEEEeeccccc----ccccccc----ccCCCEEEEEECCE
Confidence            345777764      47999887 34    3334443  778888886443    5656665    2467764  45786


Q ss_pred             EE
Q 045109          322 YI  323 (423)
Q Consensus       322 ~I  323 (423)
                      .|
T Consensus        90 ~v   91 (112)
T d1ep7a_          90 KA   91 (112)
T ss_dssp             EE
T ss_pred             EE
Confidence            43

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

Probab=87.80  E-value=0.15  Score=38.54  Aligned_cols=39  Identities=23%  Similarity=0.652  Sum_probs=31.2

Q ss_pred             CccccccCccceE-----------eCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCccc
Q 045109          356 VGACEACGDVRFV-----------PCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLTR  417 (423)
Q Consensus       356 ~~~C~~CGG~rfV-----------pC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLir  417 (423)
                      ...|..|.|.+.+           +|+.|+|+-+++..                       +|..|+=+|.|+
T Consensus        28 ~~~C~~C~G~G~v~~~~g~~~~~~~C~~C~G~G~~i~~-----------------------~C~~C~G~G~v~   77 (79)
T d1exka_          28 PQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKD-----------------------PCNKCHGHGRVE   77 (79)
T ss_dssp             CEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEECSS-----------------------BCGGGTTSSEEE
T ss_pred             ceeCCCccceeEEEEecccceeeEECcccCcceeECCC-----------------------CCCCCCCceEee
Confidence            3569999998755           69999999887521                       599999999874

>d1j9ba_ c.47.1.12 (A:) Arsenate reductase ArsC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: ArsC-like
domain: Arsenate reductase ArsC
species: Escherichia coli [TaxId: 562]

Probab=87.79  E-value=0.27  Score=40.59  Aligned_cols=45  Identities=11%  Similarity=0.158  Sum_probs=36.3

Q ss_pred             EEEEEeCCCCCCCCCCcHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHc
Q 045109          254 LVVYFTSLRGIRKTYEDCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLG  305 (423)
Q Consensus       254 VVIYtTSLrGIRKT~c~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg  305 (423)
                      |.||       ..+.|.-|+ +.++|+..||.|+.+|+-.++--.+||..++.
T Consensus         2 i~iY-------~~p~Cs~srkal~~L~~~~i~~~~idy~k~pls~~eL~~ll~   47 (138)
T d1j9ba_           2 ITIY-------HNPACGTSRNTLEMIRNSGTEPTIILYLENPPSRDELVKLIA   47 (138)
T ss_dssp             CEEE-------CCTTCHHHHHHHHHHHHTTCCCEEECTTTSCCCHHHHHHHHH
T ss_pred             eEEE-------ECCCCHHHHHHHHHHHHCCCCeEEEeeccCCCCHHHHHHHHH
Confidence            6789       567787665 99999999999999998766666777777654

>d1fo5a_ c.47.1.1 (A:) MJ0307, thioredoxin/glutaredoxin-like protein {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: MJ0307, thioredoxin/glutaredoxin-like protein
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=87.16  E-value=0.42  Score=34.79  Aligned_cols=54  Identities=11%  Similarity=0.263  Sum_probs=31.2

Q ss_pred             CCCCCcHHH-HHHHH----HhCC--CcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCC--EEEcch
Q 045109          265 RKTYEDCCH-VRVIL----KGLG--VRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGK--KYIGGA  326 (423)
Q Consensus       265 RKT~c~Cc~-VK~LL----~~~g--V~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdG--e~IGGa  326 (423)
                      ..++|+.|+ +...|    +.++  +.+...|.+.+.+    |.    ...+-..+|.++|++  +++|..
T Consensus        10 ~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~----la----~~~~V~~~Pt~~i~~~g~~~G~~   72 (85)
T d1fo5a_          10 TSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQ----KA----MEYGIMAVPTIVINGDVEFIGAP   72 (85)
T ss_dssp             ECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSCC----TT----TSTTTCCSSEEEETTEEECCSSS
T ss_pred             ECCCCcChHhhhhhcccccccccccccccccccccccc----cc----ccCCceEeeEEEEECCcEEECCC
Confidence            457998876 44444    4444  4455566553322    22    234556899988865  666653

>d1zmaa1 c.47.1.1 (A:1-115) Bacterocin transport accessory protein Bta {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Bacterocin transport accessory protein Bta
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=87.02  E-value=0.81  Score=35.31  Aligned_cols=64  Identities=9%  Similarity=0.114  Sum_probs=37.6

Q ss_pred             CCCcEEEEEeCCCCCCCCCCcHHH-H----HHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEe--CCE
Q 045109          250 GKEKLVVYFTSLRGIRKTYEDCCH-V----RVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFV--GKK  321 (423)
Q Consensus       250 ~~~kVVIYtTSLrGIRKT~c~Cc~-V----K~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFV--dGe  321 (423)
                      ....|+||+      .+++|+.|+ +    ..+...++..+..++++.. ...+++++.... .+-.++|.+++  +|+
T Consensus        25 ~~~~~~v~f------~~~~C~~C~~~~p~l~~~~~~~~~~v~~v~~~~~-~~~~~~~~~~~~-~~V~~~PTli~~~~gk   95 (115)
T d1zmaa1          25 KKETATFFI------GRKTCPYCRKFAGTLSGVVAETKAHIYFINSEEP-SQLNDLQAFRSR-YGIPTVPGFVHITDGQ   95 (115)
T ss_dssp             TTCCEEEEE------ECTTCHHHHHHHHHHHHHHHHHCCCCEEEETTCG-GGHHHHHHHHHH-HTCCSSCEEEEEETTE
T ss_pred             cCCCEEEEE------cCCCCccHHHHHHHHHHHHHHhhhhhhhheeecc-cccccccccccc-cccccccEEEEEECCE
Confidence            455688885      468999887 3    4555667777777777532 233343333221 12457888754  664

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.11  E-value=0.27  Score=36.65  Aligned_cols=41  Identities=27%  Similarity=0.703  Sum_probs=31.9

Q ss_pred             CccccccCccce---------------EeCCCCCCcceeccccchhhhcccCCCCccccCccceeeCCCCCCCCccc
Q 045109          356 VGACEACGDVRF---------------VPCETCSGSCKIYYEKEEEVEEDSEGGWVGEEADFGFQRCPDCNENGLTR  417 (423)
Q Consensus       356 ~~~C~~CGG~rf---------------VpC~~C~GS~Kv~~~~~~~~~~~~~~~~~~~~~~~~~~RC~~CNENGLir  417 (423)
                      ...|..|.|.++               .+|+.|+|+-+++..                     .-+|..|+=.|.|+
T Consensus        18 ~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~~---------------------~~~C~~C~G~g~v~   73 (74)
T d1nlta3          18 VKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDP---------------------KDRCKSCNGKKVEN   73 (74)
T ss_dssp             CCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCCT---------------------TSBCSSSTTSCEEE
T ss_pred             CCCCCCCcceeeeeEEEEecCcEEEEEEECccCccceEEeCC---------------------CCCCCCCCCeeEeC
Confidence            456999999774               469999999887654                     12699999988774

>d1iloa_ c.47.1.1 (A:) MTH985, a thioredoxin {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: MTH985, a thioredoxin
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=85.72  E-value=0.69  Score=35.27  Aligned_cols=48  Identities=23%  Similarity=0.333  Sum_probs=35.0

Q ss_pred             CCCcHHH-----HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEE
Q 045109          267 TYEDCCH-----VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYI  323 (423)
Q Consensus       267 T~c~Cc~-----VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~I  323 (423)
                      +.|+.|.     +++++..+|+.++...|. |   ..++.+ .|    --++|.|.|||+.+
T Consensus         9 ~gC~~C~~~~~~v~~a~~e~gi~a~v~kv~-d---~~ei~~-yg----VmstPalvIdg~vv   61 (77)
T d1iloa_           9 TGCANCQMLEKNAREAVKELGIDAEFEKIK-E---MDQILE-AG----LTALPGLAVDGELK   61 (77)
T ss_dssp             SSSSTTHHHHHHHHHHHHHTTCCEEEEEEC-S---HHHHHH-HT----CSSSSCEEETTEEE
T ss_pred             CCCccHHHHHHHHHHHHHHcCCceEEEEeC-C---HHHHHH-cC----CcCCCEEEECCEEE
Confidence            4576553     688899999999988884 2   345544 33    45899999999765

>d1xfla_ c.47.1.1 (A:) Thioredoxin {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=84.25  E-value=2.1  Score=32.92  Aligned_cols=65  Identities=17%  Similarity=0.182  Sum_probs=37.0

Q ss_pred             HhhhcCC-CcEEEEEeCCCCCCCCCCcHHH-HH----HHHHhC-CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCce-
Q 045109          245 LDHKCGK-EKLVVYFTSLRGIRKTYEDCCH-VR----VILKGL-GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRV-  316 (423)
Q Consensus       245 v~~li~~-~kVVIYtTSLrGIRKT~c~Cc~-VK----~LL~~~-gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQV-  316 (423)
                      ++..... ..|||++      ..+||+.|. +.    ++.+.+ ++.+..+|++.+.    ++.+.++    -..+|.+ 
T Consensus        21 ~~~~~~~~~~vlv~F------~a~wC~~C~~~~p~~~~l~~~~~~~~~~~vd~~~~~----~l~~~~~----V~~~Pt~~   86 (114)
T d1xfla_          21 LQKANESKTLVVVDF------TASWCGPCRFIAPFFADLAKKLPNVLFLKVDTDELK----SVASDWA----IQAMPTFM   86 (114)
T ss_dssp             HHHHHHTTCEEEEEE------ECTTCHHHHHHHHHHHHHHHHCSSEEEEEEETTTSH----HHHHHTT----CCSSSEEE
T ss_pred             HHHhhccCCeEEEEE------EcCCCCCccccccchhhhcccccccceeEEEeeece----eeccccc----eeeeEEEE
Confidence            4333433 4466654      358998876 44    444444 4667777776543    4444443    3578865 


Q ss_pred             -EeCCEEE
Q 045109          317 -FVGKKYI  323 (423)
Q Consensus       317 -FVdGe~I  323 (423)
                       |-+|+.+
T Consensus        87 ~~~~G~~v   94 (114)
T d1xfla_          87 FLKEGKIL   94 (114)
T ss_dssp             EEETTEEE
T ss_pred             EEECCEEE
Confidence             4588654

>d2cvda2 c.47.1.5 (A:2-75) Class sigma GST {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class sigma GST
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.51  E-value=1.5  Score=31.80  Aligned_cols=58  Identities=17%  Similarity=0.200  Sum_probs=42.7

Q ss_pred             cHHH-HHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHHHH
Q 045109          270 DCCH-VRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRMH  333 (423)
Q Consensus       270 ~Cc~-VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~Lh  333 (423)
                      .++. +|-+|...||.|+++.++.  ....+.++    .....+||.+.+||..|.....+.+..
T Consensus        12 ~~~~~vRl~L~~~gi~~e~~~~~~--~~~~~~~~----~~p~g~vP~L~~~g~~l~qS~AI~~yL   70 (74)
T d2cvda2          12 GRAEIIRYIFAYLDIQYEDHRIEQ--ADWPEIKS----TLPFGKIPILEVDGLTLHQSLAIARYL   70 (74)
T ss_dssp             GGGHHHHHHHHHTTCCCEEEEECG--GGHHHHHT----TSTTSCSCEEEETTEEEECHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEeccccc--ccchhhcc----cCCCCCcCEEEECCEEEEcHHHHHHHH
Confidence            3444 8999999999999998863  33334333    233568999999999998888877643

>d1gula2 c.47.1.5 (A:4-80) Class alpha GST {Human (Homo sapiens), (a1-1) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Glutathione S-transferase (GST), N-terminal domain
domain: Class alpha GST
species: Human (Homo sapiens), (a1-1) [TaxId: 9606]

Probab=82.22  E-value=3.8  Score=29.58  Aligned_cols=58  Identities=22%  Similarity=0.218  Sum_probs=39.9

Q ss_pred             HHHHHHHHhCCCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceEeCCEEEcchHHHHHH
Q 045109          272 CHVRVILKGLGVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVFVGKKYIGGAEEIRRM  332 (423)
Q Consensus       272 c~VK~LL~~~gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVFVdGe~IGGaDEV~~L  332 (423)
                      ..+|-+|...||.|+.+-++..... ... +. .......+||.+-.||.-|.....+.+.
T Consensus        14 ~~vR~~L~~~gi~ye~~~~~~~~~~-~~~-~~-~~~~p~g~lPvL~~~g~~l~eS~AI~~y   71 (77)
T d1gula2          14 ESVRWVLAAAGVEFDEEFLETKEQL-YKL-QD-GNHLLFQQVPMVEIDGMKLVQTRSILHY   71 (77)
T ss_dssp             HHHHHHHHHTTCCCEEEEECSHHHH-HHH-HH-TTCSTTSCSCEEEETTEEEESHHHHHHH
T ss_pred             HHHHHHHHHcCCCceEEeecccccc-chh-hh-cccCCCCCCCEEEECCEeeecHHHHHHH
Confidence            3589999999999998877643221 111 11 2222345899999999999888777664

>d1ti3a_ c.47.1.1 (A:) Thioredoxin {European aspen (Populus tremula), thioredoxin H [TaxId: 113636]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin
species: European aspen (Populus tremula), thioredoxin H [TaxId: 113636]

Probab=82.07  E-value=2.7  Score=32.14  Aligned_cols=67  Identities=18%  Similarity=0.293  Sum_probs=39.1

Q ss_pred             HHHhhhcCCCc-EEEEEeCCCCCCCCCCcHHH-HHHHHH----hC-CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCc
Q 045109          243 AVLDHKCGKEK-LVVYFTSLRGIRKTYEDCCH-VRVILK----GL-GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPR  315 (423)
Q Consensus       243 ~~v~~li~~~k-VVIYtTSLrGIRKT~c~Cc~-VK~LL~----~~-gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQ  315 (423)
                      ..++..++.++ |||++      ..+||+.|+ +...|+    .+ ++.+..+|++..+    +|.+.++    -..+|.
T Consensus        17 ~~l~~~~~~~k~vvv~F------~a~wC~~C~~~~p~~~~~~~~~~~~~~~~vd~d~~~----~l~~~~~----I~~~Pt   82 (113)
T d1ti3a_          17 EHFEKGKGSQKLIVVDF------TASWCPPCKMIAPIFAELAKKFPNVTFLKVDVDELK----AVAEEWN----VEAMPT   82 (113)
T ss_dssp             HHHHHHTTSSSEEEEEE------ECSSCHHHHHHHHHHHHHHHHCSSEEEEEEETTTCH----HHHHHHH----CSSTTE
T ss_pred             HHHHHHHcCCCEEEEEE------EcCccccchhhhhhhhhhhccCCCceEEeeeeeccc----cccccCe----ecccce
Confidence            34555555554 55654      358999887 444443    33 4667777776443    4555555    246776


Q ss_pred             e--EeCCEEE
Q 045109          316 V--FVGKKYI  323 (423)
Q Consensus       316 V--FVdGe~I  323 (423)
                      +  |-+|+.+
T Consensus        83 ~~~~k~G~~v   92 (113)
T d1ti3a_          83 FIFLKDGKLV   92 (113)
T ss_dssp             EEEEETTEEE
T ss_pred             EEEEECCEEE
Confidence            5  5688643

>d1eeja1 c.47.1.9 (A:61-216) Disulfide bond isomerase, DsbC, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: DsbC/DsbG C-terminal domain-like
domain: Disulfide bond isomerase, DsbC, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=81.56  E-value=3.1  Score=33.70  Aligned_cols=18  Identities=22%  Similarity=0.403  Sum_probs=13.7

Q ss_pred             CCCCCceEe-CCEEEcchH
Q 045109          310 GGGLPRVFV-GKKYIGGAE  327 (423)
Q Consensus       310 ~~TVPQVFV-dGe~IGGaD  327 (423)
                      -+..|.+|| ||+.|-|+-
T Consensus       119 v~GTPt~~~~nG~~v~G~~  137 (156)
T d1eeja1         119 VSGTPAVVLSNGTLVPGYQ  137 (156)
T ss_dssp             CCSSSEEECTTSCEEESCC
T ss_pred             CcCCCEEEEeCCeEecCCC
Confidence            346799777 899997763

>d1r26a_ c.47.1.1 (A:) Thioredoxin {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin
species: Trypanosoma brucei [TaxId: 5691]

Probab=81.48  E-value=2.5  Score=32.70  Aligned_cols=62  Identities=16%  Similarity=0.226  Sum_probs=37.5

Q ss_pred             hhcCCC-cEEEEEeCCCCCCCCCCcHHH-HHHHHHh----C-CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCc--eE
Q 045109          247 HKCGKE-KLVVYFTSLRGIRKTYEDCCH-VRVILKG----L-GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPR--VF  317 (423)
Q Consensus       247 ~li~~~-kVVIYtTSLrGIRKT~c~Cc~-VK~LL~~----~-gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQ--VF  317 (423)
                      +.+..+ .||||++      .+||+-|+ ++.+|+.    + +|.|...|++..    .++.+.++    -.++|.  +|
T Consensus        21 ~~~~~~~~vvv~F~------a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~----~~l~~~~~----V~~~Pt~~~~   86 (113)
T d1r26a_          21 NIMSEDILTVAWFT------AVWCGPCKTIERPMEKIAYEFPTVKFAKVDADNN----SEIVSKCR----VLQLPTFIIA   86 (113)
T ss_dssp             HHHHSSSCEEEEEE------CTTCHHHHHTHHHHHHHHHHCTTSEEEEEETTTC----HHHHHHTT----CCSSSEEEEE
T ss_pred             HHHcCCCeEEEEEE------CCCCccchhhceeccccccccccccccccccccc----hhhHHHcc----ccCCCEEEEE
Confidence            334344 5777654      57998776 5555544    3 688888888644    35555554    345665  45


Q ss_pred             eCCEE
Q 045109          318 VGKKY  322 (423)
Q Consensus       318 VdGe~  322 (423)
                      -+|+.
T Consensus        87 ~~G~~   91 (113)
T d1r26a_          87 RSGKM   91 (113)
T ss_dssp             ETTEE
T ss_pred             ECCEE
Confidence            68843

>d1dbya_ c.47.1.1 (A:) Thioredoxin {Chlamydomonas reinhardtii [TaxId: 3055]}

class: Alpha and beta proteins (a/b)
fold: Thioredoxin fold
superfamily: Thioredoxin-like
family: Thioltransferase
domain: Thioredoxin
species: Chlamydomonas reinhardtii [TaxId: 3055]

Probab=80.93  E-value=4.6  Score=30.12  Aligned_cols=58  Identities=12%  Similarity=0.219  Sum_probs=34.0

Q ss_pred             CcEEEEEeCCCCCCCCCCcHHH-HHHHH----HhC--CCcEEEEECCCChhhHHHHHHHHcCCCCCCCCCceE--eCCEE
Q 045109          252 EKLVVYFTSLRGIRKTYEDCCH-VRVIL----KGL--GVRVDERDLSMHSGFKNELKELLGDGFSGGGLPRVF--VGKKY  322 (423)
Q Consensus       252 ~kVVIYtTSLrGIRKT~c~Cc~-VK~LL----~~~--gV~yeErDVsmd~~~reEL~~lLg~~tg~~TVPQVF--VdGe~  322 (423)
                      .+|+|++.      .++|+.|. +...|    ..+  .+.+..+|++..+    +|.+.++    -..+|.++  -+|+.
T Consensus        20 kpvlv~F~------a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~d~~~----~l~~~~~----V~~~Pt~~~~~~G~~   85 (107)
T d1dbya_          20 VPVLVDFW------APWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESP----NVASEYG----IRSIPTIMVFKGGKK   85 (107)
T ss_dssp             SCEEEEEE------CTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH----HHHHHHT----CCSSCEEEEESSSSE
T ss_pred             CcEEEEEE------CCCCCCccccChHHHHHHHhhcccceEEEEecccch----hHHHHhc----ccceEEEEEEECCeE
Confidence            35777553      57999665 43333    333  4567777876543    4556665    34677765  47744


Q ss_pred             E
Q 045109          323 I  323 (423)
Q Consensus       323 I  323 (423)
                      +
T Consensus        86 v   86 (107)
T d1dbya_          86 C   86 (107)
T ss_dssp             E
T ss_pred             E
Confidence            4