Citrus Sinensis ID: 045164

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330----
MATKRHHHLCSSYFFLLLPLLLQFYSGESQLQFNYYAESCPKAEDIIKQQVINLYNKHGNTAVSWVRNLFHDCIVKSCDASLLLKKAGGIVSEQASERSFGMRNFRYVDTIKEALEEECPVTVSCADIVALSAREGIVMLGGPRIEMKTGRRDSKESYFTEVDKLIPNHNDSLSTVLSAFQSTGIDVEGTVALLGAHSVGRVHCVNLVHRLYPTVDPSLNPEYGEYLKRRCPTPNPDPKAVLYARNDPETPMIIDNNYYKNLLNQKGLLIVDQQLASDPRTAPFVEKMAADNGYFHQQFSRAVGLLSENNPLTEDQGEIRKDCRYANSNTNNVY
cccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccccccEEccccccccccccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHcccccccccHHHHHHHHHHccccccccHHccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccHHcHHHHHHHHHHccccccccHHHccccccHHHHHHHHccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccc
cccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHcHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccEEEEccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccEccEEcccccHHHHHHHcccccccHHHHHHHHHHHcccHHHHHHHHHHHHccEEEHHHcHHHccccccccccHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHccccccHHHHHHHHccccHHHHHHHHHcHHHHHHHHHHHHHHHcccccEEHHHcEcccccccccccccccc
matkrhhhlcssYFFLLLPLLLQFYSGESQLQFNyyaescpkaeDIIKQQVINLYNKHGNTAVSWVRNLFHDCIVKSCDASLLLKKAGGIVSEQASERSFGMRNFRYVDTIKEALeeecpvtvsCADIVALSAREGIVmlggpriemktgrrdskesyfTEVDklipnhndSLSTVLSAFQSTGIDVEGTVALLGAhsvgrvhcvnlvhrlyptvdpslnpeygeylkrrcptpnpdpkavlyarndpetpmiidnnyYKNLlnqkgllivdqqlasdprtapfvekmaadngyfHQQFSRAVGllsennpltedqgeirkdcryansntnnvy
MATKRHHHLCSSYFFLLLPLLLQFYSGESQLQFNYYAESCPKAEDIIKQQVINLYNKHGNTAVSWVRNLFHDCIVKSCDASLLLKKAGGIvseqasersfgmrNFRYVDTIKEALEEECPVTVSCADIVALSAregivmlggpriemktgrrdskesYFTEVDKLIPNHNDSLSTVLSAFQSTGIDVEGTVALLGAHSVGRVHCVNLVHRLYPTVDPSLNPEYGEYLKrrcptpnpdpKAVLYARNDPETPMIIDNNYYKNLLNQKGLLIVDQQLASDPRTAPFVEKMAADNGYFHQQFSRAVGLLSENNpltedqgeirkdcryansntnnvy
MATKRHHHLCSSYFFlllplllQFYSGESQLQFNYYAESCPKAEDIIKQQVINLYNKHGNTAVSWVRNLFHDCIVKSCDASLLLKKAGGIVSEQASERSFGMRNFRYVDTIKEALEEECPVTVSCADIVALSAREGIVMLGGPRIEMKTGRRDSKESYFTEVDKLIPNHNDSLSTVLSAFQSTGIDVEGTVALLGAHSVGRVHCVNLVHRLYPTVDPSLNPEYGEYLKRRCPTPNPDPKAVLYARNDPETPMIIDNNYYKNLLNQKGLLIVDQQLASDPRTAPFVEKMAADNGYFHQQFSRAVGLLSENNPLTEDQGEIRKDCRYANSNTNNVY
******HHLCSSYFFLLLPLLLQFYSGESQLQFNYYAESCPKAEDIIKQQVINLYNKHGNTAVSWVRNLFHDCIVKSCDASLLLKKAGGIVSEQASERSFGMRNFRYVDTIKEALEEECPVTVSCADIVALSAREGIVMLGGPRI************YFTEVDKLIPNHNDSLSTVLSAFQSTGIDVEGTVALLGAHSVGRVHCVNLVHRLYPTVDPSLNPEYGEYLKRR*********AVLYARNDPETPMIIDNNYYKNLLNQKGLLIVDQQLASDPRTAPFVEKMAADNGYFHQQFSRAVGLL****************************
************YFFLLLPLLLQFYSGESQLQFNYYAESCPKAEDIIKQQVINLYNKHGNTAVSWVRNLFHDCIVKSCDASLLLKKAG*********RSFGMRNFRYVDTIKEALEEECPVTVSCADIVALSAREGIVMLGGPRIEMKTGRRDSKESYFTEVDKLIPNHNDSLSTVLSAFQSTGIDVEGTVALLGAHSVGRVHCVNLVHRLYPTVDPSLNPEYGEYLKRRCP******KAVLYARNDPETPMIIDNNYYKNLLNQKGLLIVDQQLASDPRTAPFVEKMAADNGYFHQQFSRAVGLLSENNPLTEDQGEIRKDCRYANS******
********LCSSYFFLLLPLLLQFYSGESQLQFNYYAESCPKAEDIIKQQVINLYNKHGNTAVSWVRNLFHDCIVKSCDASLLLKKAGGIVSEQASERSFGMRNFRYVDTIKEALEEECPVTVSCADIVALSAREGIVMLGGPRIEMKTGRRDSKESYFTEVDKLIPNHNDSLSTVLSAFQSTGIDVEGTVALLGAHSVGRVHCVNLVHRLYPTVDPSLNPEYGEYLKRRCPTPNPDPKAVLYARNDPETPMIIDNNYYKNLLNQKGLLIVDQQLASDPRTAPFVEKMAADNGYFHQQFSRAVGLLSENNPLTEDQGEIRKDCRYANSNTNNVY
****RHHHLCSSYFFLLLPLLLQFYSGESQLQFNYYAESCPKAEDIIKQQVINLYNKHGNTAVSWVRNLFHDCIVKSCDASLLLKKAGGIVSEQA*ERSFGMRNFRYVDTIKEALEEECPVTVSCADIVALSAREGIVMLGGPRIEMKTGRRDSKESYFTEVDKLIPNHNDSLSTVLSAFQSTGIDVEGTVALLGAHSVGRVHCVNLVHRLYPTVDPSLNPEYGEYLKRRCPTP******VLYARNDPETPMIIDNNYYKNLLNQKGLLIVDQQLASDPRTAPFVEKMAADNGYFHQQFSRAVGLLSENNPLTEDQGEIRKDCRYANSN*****
iiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MATKRHHHLCSSYFFLLLPLLLQFYSGESQLQFNYYAESCPKAEDIIKQQVINLYNKHGNTAVSWVRNLFHDCIVKSCDASLLLKKAGGIVSEQASERSFGMRNFRYVDTIKEALEEECPVTVSCADIVALSAREGIVMLGGPRIEMKTGRRDSKESYFTEVDKLIPNHNDSLSTVLSAFQSTGIDVEGTVALLGAHSVGRVHCVNLVHRLYPTVDPSLNPEYGEYLKRRCPTPNPDPKAVLYARNDPETPMIIDNNYYKNLLNQKGLLIVDQQLASDPRTAPFVEKMAADNGYFHQQFSRAVGLLSENNPLTEDQGEIRKDCRYANSNTNNVY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query334 2.2.26 [Sep-21-2011]
Q42580327 Peroxidase 21 OS=Arabidop yes no 0.910 0.929 0.747 1e-139
Q9SB81330 Peroxidase 42 OS=Arabidop no no 0.907 0.918 0.590 1e-107
Q9SS67321 Peroxidase 28 OS=Arabidop no no 0.937 0.975 0.370 7e-56
O23237331 Peroxidase 49 OS=Arabidop no no 0.925 0.933 0.376 1e-54
Q9SD46344 Peroxidase 36 OS=Arabidop no no 0.922 0.895 0.386 4e-54
Q9LNL0310 Peroxidase 8 OS=Arabidops no no 0.913 0.983 0.360 2e-53
O81772326 Peroxidase 46 OS=Arabidop no no 0.931 0.953 0.363 2e-53
Q9FJZ9336 Peroxidase 72 OS=Arabidop no no 0.868 0.863 0.376 3e-53
Q9FL16328 Peroxidase 63 OS=Arabidop no no 0.901 0.917 0.380 8e-53
A7NY33321 Peroxidase 4 OS=Vitis vin no no 0.940 0.978 0.364 1e-52
>sp|Q42580|PER21_ARATH Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1 Back     alignment and function desciption
 Score =  494 bits (1272), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 228/305 (74%), Positives = 263/305 (86%), Gaps = 1/305 (0%)

Query: 24  FYSGESQLQFNYYAESCPKAEDIIKQQVINLYNKHGNTAVSWVRNLFHDCIVKSCDASLL 83
           F+ G  +L+ NYY ESCPKAE+II+QQV  LY KHGNTAVSW+RNLFHDC+VKSCDASLL
Sbjct: 23  FHIGNGELEMNYYKESCPKAEEIIRQQVETLYYKHGNTAVSWLRNLFHDCVVKSCDASLL 82

Query: 84  LKKAGGIVSEQASERSFGMRNFRYVDTIKEALEEECPVTVSCADIVALSAREGIVMLGGP 143
           L+ A G+ SEQ S+RSFGMRNF+YV  IK+ALE+ECP TVSCADIVALSAR+GIVML GP
Sbjct: 83  LETARGVESEQKSKRSFGMRNFKYVKIIKDALEKECPSTVSCADIVALSARDGIVMLKGP 142

Query: 144 RIEM-KTGRRDSKESYFTEVDKLIPNHNDSLSTVLSAFQSTGIDVEGTVALLGAHSVGRV 202
           +IEM KTGRRDS+ SY  +V+ LIPNHNDSLS+V+S F S GIDVE TVALLGAHSVGRV
Sbjct: 143 KIEMIKTGRRDSRGSYLGDVETLIPNHNDSLSSVISTFNSIGIDVEATVALLGAHSVGRV 202

Query: 203 HCVNLVHRLYPTVDPSLNPEYGEYLKRRCPTPNPDPKAVLYARNDPETPMIIDNNYYKNL 262
           HCVNLVHRLYPT+DP+L+P Y  YLK+RCP+P PDP AVLY+RND ETPM++DN YYKN+
Sbjct: 203 HCVNLVHRLYPTIDPTLDPSYALYLKKRCPSPTPDPNAVLYSRNDRETPMVVDNMYYKNI 262

Query: 263 LNQKGLLIVDQQLASDPRTAPFVEKMAADNGYFHQQFSRAVGLLSENNPLTEDQGEIRKD 322
           +  KGLL++D +LA+DPRTAPFV KMAADN YFH+QFSR V LLSE NPLT DQGEIRKD
Sbjct: 263 MAHKGLLVIDDELATDPRTAPFVAKMAADNNYFHEQFSRGVRLLSETNPLTGDQGEIRKD 322

Query: 323 CRYAN 327
           CRY N
Sbjct: 323 CRYVN 327
Might function as heat shock-like defense protein. May be implicated in the systemic acquired resistance response.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7
>sp|Q9SB81|PER42_ARATH Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2 Back     alignment and function description
>sp|Q9SS67|PER28_ARATH Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1 Back     alignment and function description
>sp|O23237|PER49_ARATH Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2 Back     alignment and function description
>sp|Q9SD46|PER36_ARATH Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2 Back     alignment and function description
>sp|Q9LNL0|PER8_ARATH Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1 Back     alignment and function description
>sp|O81772|PER46_ARATH Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1 Back     alignment and function description
>sp|Q9FJZ9|PER72_ARATH Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1 Back     alignment and function description
>sp|Q9FL16|PER63_ARATH Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1 Back     alignment and function description
>sp|A7NY33|PER4_VITVI Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query334
225626263331 peroxidase [Populus trichocarpa] 0.973 0.981 0.8 1e-150
224069376331 predicted protein [Populus trichocarpa] 0.973 0.981 0.796 1e-149
356537521327 PREDICTED: peroxidase 21-like [Glycine m 0.919 0.938 0.778 1e-145
357440429325 Peroxidase [Medicago truncatula] gi|3554 0.907 0.932 0.778 1e-143
388502634325 unknown [Medicago truncatula] 0.907 0.932 0.772 1e-142
388491098325 unknown [Lotus japonicus] 0.958 0.984 0.765 1e-141
225439922328 PREDICTED: peroxidase 21 [Vitis vinifera 0.907 0.923 0.778 1e-141
356548232329 PREDICTED: peroxidase 21-like [Glycine m 0.907 0.920 0.762 1e-140
297827217327 peroxidase 21 [Arabidopsis lyrata subsp. 0.976 0.996 0.719 1e-139
312283385328 unnamed protein product [Thellungiella h 0.910 0.926 0.757 1e-138
>gi|225626263|gb|ACN97181.1| peroxidase [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  536 bits (1380), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 260/325 (80%), Positives = 290/325 (89%)

Query: 5   RHHHLCSSYFFLLLPLLLQFYSGESQLQFNYYAESCPKAEDIIKQQVINLYNKHGNTAVS 64
           R H   S+  FLLLPLLLQFYSG+S+LQFNYYA+SCP+AE+IIK+QVI LYNKHGNTAVS
Sbjct: 7   RTHFCSSTLIFLLLPLLLQFYSGKSELQFNYYAQSCPRAEEIIKEQVIKLYNKHGNTAVS 66

Query: 65  WVRNLFHDCIVKSCDASLLLKKAGGIVSEQASERSFGMRNFRYVDTIKEALEEECPVTVS 124
           WVRNLFHDCIVKSCDASLLL+   GI SE+AS+RS GMRNF+YV+TIK ALE ECPVTVS
Sbjct: 67  WVRNLFHDCIVKSCDASLLLETVNGIESEKASQRSLGMRNFKYVNTIKAALESECPVTVS 126

Query: 125 CADIVALSAREGIVMLGGPRIEMKTGRRDSKESYFTEVDKLIPNHNDSLSTVLSAFQSTG 184
           CADIVALSAR+GIVMLGGPR+EMKTGRRDS ESY   V+  IPNHNDS+S VLS FQS G
Sbjct: 127 CADIVALSARDGIVMLGGPRVEMKTGRRDSTESYGAVVEDFIPNHNDSISLVLSRFQSIG 186

Query: 185 IDVEGTVALLGAHSVGRVHCVNLVHRLYPTVDPSLNPEYGEYLKRRCPTPNPDPKAVLYA 244
           +DVEGTVALLG+HSVGRVHCVNLVHR+YPTVDP+++P+Y EYLK RCPTP+PDP+AVLYA
Sbjct: 187 VDVEGTVALLGSHSVGRVHCVNLVHRIYPTVDPTMDPDYAEYLKGRCPTPDPDPQAVLYA 246

Query: 245 RNDPETPMIIDNNYYKNLLNQKGLLIVDQQLASDPRTAPFVEKMAADNGYFHQQFSRAVG 304
           RND ETPMI+DN YYKNLL  KGLL+VDQQL SDP T+P+VEKMAADNGYFH QFSRAV 
Sbjct: 247 RNDRETPMILDNYYYKNLLGHKGLLMVDQQLTSDPLTSPYVEKMAADNGYFHDQFSRAVV 306

Query: 305 LLSENNPLTEDQGEIRKDCRYANSN 329
           LLSENNPLT +QGEIRKDCRY NSN
Sbjct: 307 LLSENNPLTGNQGEIRKDCRYVNSN 331

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224069376|ref|XP_002326343.1| predicted protein [Populus trichocarpa] gi|222833536|gb|EEE72013.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356537521|ref|XP_003537275.1| PREDICTED: peroxidase 21-like [Glycine max] Back     alignment and taxonomy information
>gi|357440429|ref|XP_003590492.1| Peroxidase [Medicago truncatula] gi|355479540|gb|AES60743.1| Peroxidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|388502634|gb|AFK39383.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|388491098|gb|AFK33615.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|225439922|ref|XP_002275288.1| PREDICTED: peroxidase 21 [Vitis vinifera] gi|297741574|emb|CBI32706.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356548232|ref|XP_003542507.1| PREDICTED: peroxidase 21-like [Glycine max] Back     alignment and taxonomy information
>gi|297827217|ref|XP_002881491.1| peroxidase 21 [Arabidopsis lyrata subsp. lyrata] gi|297327330|gb|EFH57750.1| peroxidase 21 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|312283385|dbj|BAJ34558.1| unnamed protein product [Thellungiella halophila] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query334
TAIR|locus:2061794327 AT2G37130 [Arabidopsis thalian 0.910 0.929 0.747 6.1e-126
TAIR|locus:2141637330 PRXR1 [Arabidopsis thaliana (t 0.904 0.915 0.592 8.2e-99
TAIR|locus:2080928344 AT3G50990 [Arabidopsis thalian 0.904 0.877 0.397 7.2e-52
TAIR|locus:2115335331 AT4G36430 [Arabidopsis thalian 0.871 0.879 0.385 1.3e-50
TAIR|locus:2154925336 AT5G66390 [Arabidopsis thalian 0.898 0.892 0.370 7.4e-50
TAIR|locus:2053129338 AT2G18150 [Arabidopsis thalian 0.904 0.893 0.373 1.2e-49
TAIR|locus:2173757328 AT5G40150 [Arabidopsis thalian 0.901 0.917 0.380 1.2e-49
TAIR|locus:2096419321 AT3G03670 [Arabidopsis thalian 0.886 0.922 0.378 3.2e-49
TAIR|locus:2009318310 AT1G34510 [Arabidopsis thalian 0.868 0.935 0.372 4.1e-49
TAIR|locus:2053139337 AT2G18140 [Arabidopsis thalian 0.904 0.896 0.367 8.5e-49
TAIR|locus:2061794 AT2G37130 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1237 (440.5 bits), Expect = 6.1e-126, P = 6.1e-126
 Identities = 228/305 (74%), Positives = 263/305 (86%)

Query:    24 FYSGESQLQFNYYAESCPKAEDIIKQQVINLYNKHGNTAVSWVRNLFHDCIVKSCDASLL 83
             F+ G  +L+ NYY ESCPKAE+II+QQV  LY KHGNTAVSW+RNLFHDC+VKSCDASLL
Sbjct:    23 FHIGNGELEMNYYKESCPKAEEIIRQQVETLYYKHGNTAVSWLRNLFHDCVVKSCDASLL 82

Query:    84 LKKAGGIVSEQASERSFGMRNFRYVDTIKEALEEECPVTVSCADIVALSAREGIVMLGGP 143
             L+ A G+ SEQ S+RSFGMRNF+YV  IK+ALE+ECP TVSCADIVALSAR+GIVML GP
Sbjct:    83 LETARGVESEQKSKRSFGMRNFKYVKIIKDALEKECPSTVSCADIVALSARDGIVMLKGP 142

Query:   144 RIEM-KTGRRDSKESYFTEVDKLIPNHNDSLSTVLSAFQSTGIDVEGTVALLGAHSVGRV 202
             +IEM KTGRRDS+ SY  +V+ LIPNHNDSLS+V+S F S GIDVE TVALLGAHSVGRV
Sbjct:   143 KIEMIKTGRRDSRGSYLGDVETLIPNHNDSLSSVISTFNSIGIDVEATVALLGAHSVGRV 202

Query:   203 HCVNLVHRLYPTVDPSLNPEYGEYLKRRCPTPNPDPKAVLYARNDPETPMIIDNNYYKNL 262
             HCVNLVHRLYPT+DP+L+P Y  YLK+RCP+P PDP AVLY+RND ETPM++DN YYKN+
Sbjct:   203 HCVNLVHRLYPTIDPTLDPSYALYLKKRCPSPTPDPNAVLYSRNDRETPMVVDNMYYKNI 262

Query:   263 LNQKGLLIVDQQLASDPRTAPFVEKMAADNGYFHQQFSRAVGLLSENNPLTEDQGEIRKD 322
             +  KGLL++D +LA+DPRTAPFV KMAADN YFH+QFSR V LLSE NPLT DQGEIRKD
Sbjct:   263 MAHKGLLVIDDELATDPRTAPFVAKMAADNNYFHEQFSRGVRLLSETNPLTGDQGEIRKD 322

Query:   323 CRYAN 327
             CRY N
Sbjct:   323 CRYVN 327
GO:0004601 "peroxidase activity" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006979 "response to oxidative stress" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0050832 "defense response to fungus" evidence=IMP
GO:0005829 "cytosol" evidence=IDA
TAIR|locus:2141637 PRXR1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080928 AT3G50990 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115335 AT4G36430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2154925 AT5G66390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053129 AT2G18150 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2173757 AT5G40150 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2096419 AT3G03670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009318 AT1G34510 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053139 AT2G18140 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q42580PER21_ARATH1, ., 1, 1, ., 1, ., 70.74750.91010.9296yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.11.1.70.979
3rd Layer1.11.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query334
cd00693298 cd00693, secretory_peroxidase, Horseradish peroxid 1e-137
PLN03030324 PLN03030, PLN03030, cationic peroxidase; Provision 8e-52
pfam00141180 pfam00141, peroxidase, Peroxidase 2e-48
cd00314255 cd00314, plant_peroxidase_like, Heme-dependent per 2e-23
cd00691253 cd00691, ascorbate_peroxidase, Ascorbate peroxidas 9e-14
cd00692328 cd00692, ligninase, Ligninase and other manganese- 2e-11
PLN02879251 PLN02879, PLN02879, L-ascorbate peroxidase 1e-10
PLN02364250 PLN02364, PLN02364, L-ascorbate peroxidase 1 5e-10
pfam00141180 pfam00141, peroxidase, Peroxidase 7e-08
PLN02608289 PLN02608, PLN02608, L-ascorbate peroxidase 2e-07
cd08201264 cd08201, plant_peroxidase_like_1, Uncharacterized 7e-07
>gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information 
 Score =  391 bits (1006), Expect = e-137
 Identities = 127/300 (42%), Positives = 171/300 (57%), Gaps = 9/300 (3%)

Query: 30  QLQFNYYAESCPKAEDIIKQQVINLYNKHGNTAVSWVRNLFHDCIVKSCDASLLLKKAGG 89
           QL   +Y++SCP AE I++  V          A + +R  FHDC V+ CDAS+LL     
Sbjct: 1   QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTAN 60

Query: 90  IVSEQASERSFGMRNFRYVDTIKEALEEECPVTVSCADIVALSAREGIVMLGGPRIEMKT 149
             SE+ +  +  +R F  +D IK ALE  CP  VSCADI+AL+AR+ +V+ GGP  E+  
Sbjct: 61  NTSEKDAPPNLSLRGFDVIDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPL 120

Query: 150 GRRDSKESYFTEVDKLIPNHNDSLSTVLSAFQSTGIDVEGTVALLGAHSVGRVHCVNLVH 209
           GRRD + S   +V  L P+   S+S ++S F S G+ V   VAL GAH++GR HC +   
Sbjct: 121 GRRDGRVSSANDVGNL-PSPFFSVSQLISLFASKGLTVTDLVALSGAHTIGRAHCSSFSD 179

Query: 210 RLYPT-----VDPSLNPEYGEYLKRRCPTPNPDPKAVLYARNDPETPMIIDNNYYKNLLN 264
           RLY        DP+L+P Y   L+++CP    D   V     DP TP   DN+YYKNLL 
Sbjct: 180 RLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLV---PLDPGTPNTFDNSYYKNLLA 236

Query: 265 QKGLLIVDQQLASDPRTAPFVEKMAADNGYFHQQFSRAVGLLSENNPLTEDQGEIRKDCR 324
            +GLL  DQ L SDPRT   V + AA+   F + F+ A+  +     LT  QGEIRK+CR
Sbjct: 237 GRGLLTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCR 296

Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. Length = 298
>gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>gnl|CDD|173825 cd00691, ascorbate_peroxidase, Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>gnl|CDD|173826 cd00692, ligninase, Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>gnl|CDD|178467 PLN02879, PLN02879, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|166005 PLN02364, PLN02364, L-ascorbate peroxidase 1 Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|178218 PLN02608, PLN02608, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|173829 cd08201, plant_peroxidase_like_1, Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 334
PLN03030324 cationic peroxidase; Provisional 100.0
cd00693298 secretory_peroxidase Horseradish peroxidase and re 100.0
PF00141230 peroxidase: Peroxidase; InterPro: IPR002016 Peroxi 100.0
PLN02608289 L-ascorbate peroxidase 100.0
cd00691253 ascorbate_peroxidase Ascorbate peroxidases and cyt 100.0
PLN02364250 L-ascorbate peroxidase 1 100.0
cd00692328 ligninase Ligninase and other manganese-dependent 100.0
PLN02879251 L-ascorbate peroxidase 100.0
cd00314255 plant_peroxidase_like Heme-dependent peroxidases s 100.0
cd00649409 catalase_peroxidase_1 N-terminal catalytic domain 100.0
TIGR00198 716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
cd08201264 plant_peroxidase_like_1 Uncharacterized family of 100.0
PRK15061 726 catalase/hydroperoxidase HPI(I); Provisional 100.0
cd08200297 catalase_peroxidase_2 C-terminal non-catalytic dom 100.0
TIGR00198716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061726 catalase/hydroperoxidase HPI(I); Provisional 100.0
COG0376 730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.97
COG0376730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.41
>PLN03030 cationic peroxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=6.9e-106  Score=769.81  Aligned_cols=295  Identities=32%  Similarity=0.567  Sum_probs=278.9

Q ss_pred             ccCCCCCcchhhccCccHHHHHHHHHHHHHHhCCChhhhHHHHHhcccccccCCceeecccCCCCccccccccCCCCchh
Q 045164           26 SGESQLQFNYYAESCPKAEDIIKQQVINLYNKHGNTAVSWVRNLFHDCIVKSCDASLLLKKAGGIVSEQASERSFGMRNF  105 (334)
Q Consensus        26 ~~~~~l~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDcfv~GcDgSilld~~~~~~~E~~~~~N~~L~g~  105 (334)
                      ...++|+++||++|||++|+||++.|++.+.+||+++|++|||+||||||+||||||||+++   ..||++++|.+|+||
T Consensus        20 ~~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~---~~Ek~a~~N~~l~Gf   96 (324)
T PLN03030         20 VQGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS---NTEKTALPNLLLRGY   96 (324)
T ss_pred             chhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC---cccccCCCCcCcchH
Confidence            34567999999999999999999999999999999999999999999999999999999854   479999999999999


Q ss_pred             HHHHHHHHHHhhhCCCccChhhHHHhhhhhhhhhcCCCccccccCCCCCCCCcccccccCCCCCCCCHHHHHHHHHHCCC
Q 045164          106 RYVDTIKEALEEECPVTVSCADIVALSAREGIVMLGGPRIEMKTGRRDSKESYFTEVDKLIPNHNDSLSTVLSAFQSTGI  185 (334)
Q Consensus       106 ~~I~~iK~~le~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl  185 (334)
                      ++|+.||+++|++||++|||||||||||||||+++|||.|+|++||||+++|.+.++. +||+|+.++++|++.|+++||
T Consensus        97 ~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~~~~~~l~~~F~~~Gl  175 (324)
T PLN03030         97 DVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGFTDSIDVQKQKFAAKGL  175 (324)
T ss_pred             HHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCCCCCHHHHHHHHHHcCC
Confidence            9999999999999999999999999999999999999999999999999999877764 899999999999999999999


Q ss_pred             CcccceeeecccccccccccccccccCC------CCCCCCChHHHHHHhccCCCCCCCCCCccccCCCCCCCCccChHHH
Q 045164          186 DVEGTVALLGAHSVGRVHCVNLVHRLYP------TVDPSLNPEYGEYLKRRCPTPNPDPKAVLYARNDPETPMIIDNNYY  259 (334)
Q Consensus       186 ~~~elVaLsGaHTiG~~hc~~f~~Rl~~------~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~FDN~Yy  259 (334)
                      +.+|||+||||||||++||.+|.+|||+      .+||+||+.|+..|++.|| ..++..+.  +++|+.||.+|||+||
T Consensus       176 ~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp-~~~~~~~~--~~lD~~Tp~~FDn~Yy  252 (324)
T PLN03030        176 NTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCP-QNGDGSRR--IALDTGSSNRFDASFF  252 (324)
T ss_pred             CHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCC-CCCCCCcc--ccCCCCCCcccccHHH
Confidence            9999999999999999999999999992      3699999999999999999 33333334  7899999999999999


Q ss_pred             HHhhcccccchhhhhhccCCCcHHHHHHhhhCh----HHHHHHHHHHHHHhhcCCCCCCCCCcccccccccc
Q 045164          260 KNLLNQKGLLIVDQQLASDPRTAPFVEKMAADN----GYFHQQFSRAVGLLSENNPLTEDQGEIRKDCRYAN  327 (334)
Q Consensus       260 ~~l~~~~glL~SD~~L~~d~~t~~~V~~yA~d~----~~F~~~Fa~Am~Km~~igv~tg~~GeiR~~C~~~n  327 (334)
                      +||++++|+|+|||+|+.|++|+++|++||.|+    +.|+++|++||+|||+|+||||.+|||||+|+++|
T Consensus       253 ~nll~~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN  324 (324)
T PLN03030        253 SNLKNGRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN  324 (324)
T ss_pred             HHHHhcCCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence            999999999999999999999999999999875    59999999999999999999999999999999998

>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information
>PLN02608 L-ascorbate peroxidase Back     alignment and domain information
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>PLN02364 L-ascorbate peroxidase 1 Back     alignment and domain information
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>PLN02879 L-ascorbate peroxidase Back     alignment and domain information
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query334
1bgp_A309 Crystal Structure Of Barley Grain Peroxidase 1 Leng 1e-51
1sch_A294 Peanut Peroxidase Length = 294 3e-48
1pa2_A306 Arabidopsis Thaliana Peroxidase A2 Length = 306 2e-47
1gx2_A309 Recombinant Horseradish Peroxidase Phe209ser Comple 8e-47
1gw2_A308 Recombinant Horseradish Peroxidase C1a Thr171ser In 1e-46
1gwu_A309 Recombinant Horseradish Peroxidase C1a Ala140gly Le 1e-46
1gwo_A309 Recombinant Horseradish Peroxidase C1a Ala170gln Le 1e-46
3atj_A309 Heme Ligand Mutant Of Recombinant Horseradish Perox 2e-46
1w4w_A323 Ferric Horseradish Peroxidase C1a In Complex With F 2e-46
6atj_A308 Recombinant Horseradish Peroxidase C Complex With F 2e-46
2atj_A308 Recombinant Horseradish Peroxidase Complex With Ben 2e-46
2ylj_A306 Horse Radish Peroxidase, Mutant S167y Length = 306 7e-46
1atj_A306 Recombinant Horseradish Peroxidase C1a Length = 306 1e-45
4atj_A309 Distal Heme Pocket Mutant (H42e) Of Recombinant Hor 2e-45
4a5g_A308 Raphanus Sativus Anionic Peroxidase. Length = 308 3e-45
1kzm_A308 Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan 1e-44
3hdl_A304 Crystal Structure Of Highly Glycosylated Peroxidase 8e-43
1qgj_A300 Arabidopsis Thaliana Peroxidase N Length = 300 2e-38
1fhf_A304 The Structure Of Soybean Peroxidase Length = 304 4e-38
1jci_A294 Stabilization Of The Engineered Cation-Binding Loop 5e-10
1jdr_A294 Crystal Structure Of A Proximal Domain Potassium Bi 4e-09
1krj_A294 Engineering Calcium-Binding Site Into Cytochrome C 7e-09
2xif_A249 The Structure Of Ascorbate Peroxidase Compound Ii L 8e-09
1oaf_A261 Ascobate Peroxidase From Soybean Cytosol In Complex 8e-09
2y6a_A249 Ascorbate Peroxidase R38a Mutant Length = 249 8e-09
2vcf_X264 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 9e-09
2y6b_A249 Ascorbate Peroxidase R38k Mutant Length = 249 9e-09
3zcy_A249 Ascorbate Peroxidase W41a-h42y Mutant Length = 249 9e-09
3riw_A271 The Crystal Structure Of Leishmania Major Peroxidas 9e-09
2vcs_A261 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 9e-09
2ggn_X261 Conformational Mobility In The Active Site Of A Hem 1e-08
3zch_A261 Ascorbate Peroxidase W41a-h42m Mutant Length = 261 1e-08
3riv_A271 The Crystal Structure Of Leishmania Major Peroxidas 1e-08
4ged_A268 Crystal Structure Of The Leishmania Major Peroxidas 1e-08
3zcg_A261 Ascorbate Peroxidase W41a-h42c Mutant Length = 261 1e-08
1sog_A294 Cyrstal Structure Of Cytochrome C Peroxidase Mutant 1e-08
3ccx_A294 Altering Substrate Specificity At The Heme Edge Of 3e-08
1cck_A291 Altering Substrate Specificity Of Cytochrome C Pero 3e-08
1stq_A294 Cyrstal Structure Of Cytochrome C Peroxidase Mutant 4e-08
1apx_A249 Crystal Structure Of Recombinant Ascorbate Peroxida 5e-08
1kxm_A290 Crystal Structure Of Cytochrome C Peroxidase With A 6e-08
2cl4_X261 Ascorbate Peroxidase R172a Mutant Length = 261 6e-08
1kxn_A289 Crystal Structure Of Cytochrome C Peroxidase With A 6e-08
1dcc_A296 2.2 Angstrom Structure Of Oxyperoxidase: A Model Fo 7e-08
3exb_A295 Crystal Structure Of Cytochrome C Peroxidase With A 7e-08
4a7m_A296 Cytochrome C Peroxidase S81w Mutant Length = 296 7e-08
1mk8_A294 Crystal Structure Of A Mutant Cytochrome C Peroxida 8e-08
1cpg_A296 A Cation Binding Motif Stabilizes The Compound I Ra 8e-08
1cyf_A296 Identifying The Physiological Electron Transfer Sit 8e-08
1cca_A297 The Asp-His-Fe Triad Of Cytochrome C Peroxidase Con 8e-08
3r98_A293 Joint Neutron And X-Ray Structure Of Cytochrome C P 8e-08
2pcb_A296 Crystal Structure Of A Complex Between Electron Tra 8e-08
2gb8_A294 Solution Structure Of The Complex Between Yeast Iso 8e-08
1kok_A294 Crystal Structure Of Mesopone Cytochrome C Peroxida 8e-08
5ccp_A296 Histidine 52 Is A Critical Residue For Rapid Format 8e-08
4ccx_A294 Altering Substrate Specificity At The Heme Edge Of 8e-08
6ccp_A296 Effect Of Arginine-48 Replacement On The Reaction B 8e-08
2cep_A296 Role Of Met-230 In Intramolecular Electron Transfer 8e-08
7ccp_A296 Effect Of Arginine-48 Replacement On The Reaction B 8e-08
3e2n_A287 Engineering Ascorbate Peroxidase Activity Into Cyto 9e-08
4ccp_A296 X-Ray Structures Of Recombinant Yeast Cytochrome C 9e-08
2xil_A294 The Structure Of Cytochrome C Peroxidase Compound I 9e-08
2x07_A293 Cytochrome C Peroxidase: Engineered Ascorbate Bindi 9e-08
2xj5_A294 The Structure Of Cytochrome C Peroxidase Compound I 9e-08
1dj1_A291 Crystal Structure Of R48a Mutant Of Cytochrome C Pe 1e-07
2v23_A296 Structure Of Cytochrome C Peroxidase Mutant N184r Y 1e-07
3m23_A291 Crystallographic And Single Crystal Spectral Analys 1e-07
1bva_A294 Manganese Binding Mutant In Cytochrome C Peroxidase 1e-07
1s6v_A294 Structure Of A Cytochrome C Peroxidase-Cytochrome C 1e-07
2v2e_A294 Structure Of Isoniazid (Inh) Bound To Cytochrome C 1e-07
4a71_A296 Cytochrome C Peroxidase In Complex With Phenol Leng 1e-07
4a78_A296 Cytochrome C Peroxidase M119w In Complex With Guiac 1e-07
2aqd_A294 Cytochrome C Peroxidase (Ccp) In Complex With 2,5- 1e-07
1cpd_A296 A Cation Binding Motif Stabilizes The Compound I Ra 1e-07
1beq_A291 Interaction Between Proximal And Distals Regions Of 2e-07
1bem_A291 Interaction Between Proximal And Distals Regions Of 2e-07
1ccl_A291 Probing The Strength And Character Of An Asp-His-X 2e-07
1ebe_A294 Laue Diffraction Study On The Structure Of Cytochro 2e-07
1a2g_A291 Probing The Strength And Character Of An Asp-His-X 3e-07
1a2f_A291 Probing The Strength And Character Of An Asp-His-X 3e-07
1ccb_A297 The Asp-His-Fe Triad Of Cytochrome C Peroxidase Con 3e-07
1bep_A291 Effect Of Unnatural Heme Substitution On Kinetics O 3e-07
1bek_A291 Effect Of Unnatural Heme Substitution On Kinetics O 3e-07
2ccp_A296 X-Ray Structures Of Recombinant Yeast Cytochrome C 3e-07
1cci_A294 How Flexible Are Proteins? Trapping Of A Flexible L 4e-07
2anz_A294 Cytochrome C Peroxidase In Complex With 2,6-Diamino 4e-07
2rbu_X292 Cytochrome C Peroxidase In Complex With Cyclopentan 5e-07
1bej_A291 Interaction Between Proximal And Distals Regions Of 5e-07
1cmu_A294 The Role Of Aspartate-235 In The Binding Of Cations 5e-07
3e2o_A294 Crystal Structure Of Cytochrome C Peroxidase, N184r 7e-07
2ia8_A291 Kinetic And Crystallographic Studies Of A Redesigne 7e-07
1ccc_A297 The Asp-His-Fe Triad Of Cytochrome C Peroxidase Con 7e-07
1mn2_A357 Manganese Peroxidase Substrate Binding Site Mutant 1e-06
1dse_A292 Cytochrome C Peroxidase H175g Mutant, Imidazole Com 1e-06
1ds4_A292 Cytochrome C Peroxidase H175g Mutant, Imidazole Com 1e-06
1cce_A291 Construction Of A Bis-Aquo Heme Enzyme And Replacem 1e-06
1iyn_A295 Crystal Structure Of Chloroplastic Ascorbate Peroxi 1e-06
1mn1_A357 Manganese Peroxidase Substrate Binding Site Mutant 1e-06
1yyd_A357 High Resolution Crystal Structure Of Manganese Pero 2e-06
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 Length = 309 Back     alignment and structure 
Iteration: 1

 Score =  199 bits (507), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 109/302 (36%), Positives = 173/302 (57%), Gaps = 10/302 (3%)
Query: 31  LQFNYYAESCPKAEDIIKQQVINLYNKHGNTAVSWVRNLFHDCIVKSCDASLLLKKAGGI 90
           L F++Y ++CP+AE I+++ V     K    A   +R  FHDC V+ CDAS+LL  +   
Sbjct: 9   LSFDFYWQTCPRAESIVREFVQEAVRKDIGLAAGLLRLHFHDCFVQGCDASVLLDGSATG 68
Query: 91  VSEQASERSFGMR--NFRYVDTIKEALEEEC-PVTVSCADIVALSAREGIVMLGGPRIEM 147
             EQ +  +  +R   F+ V+ I++ LE EC    VSC+DI+AL+AR+ +V+ GGP   +
Sbjct: 69  PGEQQAPPNLTLRPSAFKAVNDIRDRLERECRGAVVSCSDILALAARDSVVVSGGPDYRV 128
Query: 148 KTGRRDSKESYFTEVDKL--IPNHNDSLSTVLSAFQSTGIDVEGTVALLGAHSVGRVHCV 205
             GRRDS+ S+ +  D L  +P  + ++ ++L+     G+D    V + G H++G  HC 
Sbjct: 129 PLGRRDSR-SFASTQDVLSDLPGPSSNVQSLLALLGRLGLDATDLVTISGGHTIGLAHCS 187
Query: 206 NLVHRLYPTVDPSLNPEYGEYLKRRCPTPNPDPKAVLYARNDPETPMIIDNNYYKNLLNQ 265
           +   RL+P  DP+++P +   LKR CP    D + VL  R    TP + DN YY +L+N+
Sbjct: 188 SFEDRLFPRPDPTISPTFLSRLKRTCPAKGTDRRTVLDVR----TPNVFDNKYYIDLVNR 243
Query: 266 KGLLIVDQQLASDPRTAPFVEKMAADNGYFHQQFSRAVGLLSENNPLTEDQGEIRKDCRY 325
           +GL + DQ L ++  T P VE+ A     F +QF  ++G + +    T DQGE+R++C  
Sbjct: 244 EGLFVSDQDLFTNAITRPIVERFAQSQQDFFEQFGVSIGKMGQMRVRTSDQGEVRRNCSV 303
Query: 326 AN 327
            N
Sbjct: 304 RN 305
>pdb|1SCH|A Chain A, Peanut Peroxidase Length = 294 Back     alignment and structure
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306 Back     alignment and structure
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309 Back     alignment and structure
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309 Back     alignment and structure
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323 Back     alignment and structure
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308 Back     alignment and structure
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306 Back     alignment and structure
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306 Back     alignment and structure
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308 Back     alignment and structure
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308 Back     alignment and structure
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree Length = 304 Back     alignment and structure
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N Length = 300 Back     alignment and structure
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304 Back     alignment and structure
>pdb|1JCI|A Chain A, Stabilization Of The Engineered Cation-Binding Loop In Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure
>pdb|1JDR|A Chain A, Crystal Structure Of A Proximal Domain Potassium Binding Variant Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1KRJ|A Chain A, Engineering Calcium-Binding Site Into Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii Length = 249 Back     alignment and structure
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With Ascorbate Length = 261 Back     alignment and structure
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant Length = 249 Back     alignment and structure
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Length = 264 Back     alignment and structure
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant Length = 249 Back     alignment and structure
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant Length = 249 Back     alignment and structure
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Mutant C197t Length = 271 Back     alignment and structure
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Mutant H42a Length = 261 Back     alignment and structure
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme Peroxidase Length = 261 Back     alignment and structure
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant Length = 261 Back     alignment and structure
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Length = 271 Back     alignment and structure
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major Peroxidase-Cytochrome C Complex Length = 268 Back     alignment and structure
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant Length = 261 Back     alignment and structure
>pdb|1SOG|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m2 Length = 294 Back     alignment and structure
>pdb|3CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1CCK|A Chain A, Altering Substrate Specificity Of Cytochrome C Peroxidase Towards A Small Molecular Substrate Peroxidase By Substituting Tyrosine For Phe 202 Length = 291 Back     alignment and structure
>pdb|1STQ|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m3 Length = 294 Back     alignment and structure
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase Length = 249 Back     alignment and structure
>pdb|1KXM|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Transfer Pathway Excised To Form A Ligand Binding Channel Length = 290 Back     alignment and structure
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant Length = 261 Back     alignment and structure
>pdb|1KXN|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Transfer Pathway Excised To Form A Ligand Binding Channel Length = 289 Back     alignment and structure
>pdb|1DCC|A Chain A, 2.2 Angstrom Structure Of Oxyperoxidase: A Model For The Enzyme:peroxide Complex Length = 296 Back     alignment and structure
>pdb|3EXB|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Pathway Excised In A Complex With A Peptide Wire Length = 295 Back     alignment and structure
>pdb|4A7M|A Chain A, Cytochrome C Peroxidase S81w Mutant Length = 296 Back     alignment and structure
>pdb|1MK8|A Chain A, Crystal Structure Of A Mutant Cytochrome C Peroxidase Showing A Novel Trp-Tyr Covalent Cross-Link Length = 294 Back     alignment and structure
>pdb|1CPG|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical Of Cytochrome C Peroxidase Length = 296 Back     alignment and structure
>pdb|1CYF|A Chain A, Identifying The Physiological Electron Transfer Site Of Cytochrome C Peroxidase By Structure-Based Engineering Length = 296 Back     alignment and structure
>pdb|1CCA|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls The Reduction Potential, Electronic Structure, And Coupling Of The Tryptophan Free-Radical To The Heme Length = 297 Back     alignment and structure
>pdb|3R98|A Chain A, Joint Neutron And X-Ray Structure Of Cytochrome C Peroxidase Length = 293 Back     alignment and structure
>pdb|2PCB|A Chain A, Crystal Structure Of A Complex Between Electron Transfer Partners, Cytochrome C Peroxidase And Cytochrome C Length = 296 Back     alignment and structure
>pdb|2GB8|A Chain A, Solution Structure Of The Complex Between Yeast Iso-1- Cytochrome C And Yeast Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1KOK|A Chain A, Crystal Structure Of Mesopone Cytochrome C Peroxidase (Mpccp) Length = 294 Back     alignment and structure
>pdb|5CCP|A Chain A, Histidine 52 Is A Critical Residue For Rapid Formation Of Cytochrome C Peroxidase Compound I Length = 296 Back     alignment and structure
>pdb|4CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|6CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between Cytochrome C Peroxidase And Hydrogen Peroxide Length = 296 Back     alignment and structure
>pdb|2CEP|A Chain A, Role Of Met-230 In Intramolecular Electron Transfer Between The Oxyferryl Heme And Trp 191 In Cytochrome C Peroxidase Compound Ii Length = 296 Back     alignment and structure
>pdb|7CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between Cytochrome C Peroxidase And Hydrogen Peroxide Length = 296 Back     alignment and structure
>pdb|3E2N|A Chain A, Engineering Ascorbate Peroxidase Activity Into Cytochrome C Peroxidase Length = 287 Back     alignment and structure
>pdb|4CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C Peroxidase And Three Heme-Cleft Mutants Prepared By Site-Directed Mutagenesis Length = 296 Back     alignment and structure
>pdb|2XIL|A Chain A, The Structure Of Cytochrome C Peroxidase Compound I Length = 294 Back     alignment and structure
>pdb|2X07|A Chain A, Cytochrome C Peroxidase: Engineered Ascorbate Binding Site Length = 293 Back     alignment and structure
>pdb|2XJ5|A Chain A, The Structure Of Cytochrome C Peroxidase Compound Ii Length = 294 Back     alignment and structure
>pdb|1DJ1|A Chain A, Crystal Structure Of R48a Mutant Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|2V23|A Chain A, Structure Of Cytochrome C Peroxidase Mutant N184r Y36a Length = 296 Back     alignment and structure
>pdb|3M23|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of The Peroxidase Ferryl Intermediate Length = 291 Back     alignment and structure
>pdb|1BVA|A Chain A, Manganese Binding Mutant In Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1S6V|A Chain A, Structure Of A Cytochrome C Peroxidase-Cytochrome C Site Specific Cross-Link Length = 294 Back     alignment and structure
>pdb|2V2E|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytochrome C Peroxidase Mutant N184r Y36a Length = 294 Back     alignment and structure
>pdb|4A71|A Chain A, Cytochrome C Peroxidase In Complex With Phenol Length = 296 Back     alignment and structure
>pdb|4A78|A Chain A, Cytochrome C Peroxidase M119w In Complex With Guiacol Length = 296 Back     alignment and structure
>pdb|2AQD|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2,5- Diaminopyridine Length = 294 Back     alignment and structure
>pdb|1CPD|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical Of Cytochrome C Peroxidase Length = 296 Back     alignment and structure
>pdb|1BEQ|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1BEM|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1CCL|A Chain A, Probing The Strength And Character Of An Asp-His-X Hydrogen Bond By Introducing Buried Charges Length = 291 Back     alignment and structure
>pdb|1EBE|A Chain A, Laue Diffraction Study On The Structure Of Cytochrome C Peroxidase Compound I Length = 294 Back     alignment and structure
>pdb|1A2G|A Chain A, Probing The Strength And Character Of An Asp-His-X Hydrogen Bond By Introducing Buried Charges Length = 291 Back     alignment and structure
>pdb|1A2F|A Chain A, Probing The Strength And Character Of An Asp-His-X Hydrogen Bond By Introducing Buried Charges Length = 291 Back     alignment and structure
>pdb|1CCB|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls The Reduction Potential, Electronic Structure, And Coupling Of The Tryptophan Free-Radical To The Heme Length = 297 Back     alignment and structure
>pdb|1BEP|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of Electron Transfer In Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1BEK|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of Electron Transfer In Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|2CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C Peroxidase And Three Heme-Cleft Mutants Prepared By Site-Directed Mutagenesis Length = 296 Back     alignment and structure
>pdb|1CCI|A Chain A, How Flexible Are Proteins? Trapping Of A Flexible Loop Length = 294 Back     alignment and structure
>pdb|2ANZ|A Chain A, Cytochrome C Peroxidase In Complex With 2,6-Diaminopyridine Length = 294 Back     alignment and structure
>pdb|2RBU|X Chain X, Cytochrome C Peroxidase In Complex With Cyclopentane-Carboximidamide Length = 292 Back     alignment and structure
>pdb|1BEJ|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1CMU|A Chain A, The Role Of Aspartate-235 In The Binding Of Cations To An Artificial Cavity At The Radical Site Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|3E2O|A Chain A, Crystal Structure Of Cytochrome C Peroxidase, N184r Mutant Length = 294 Back     alignment and structure
>pdb|2IA8|A Chain A, Kinetic And Crystallographic Studies Of A Redesigned Manganese-Binding Site In Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1CCC|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls The Reduction Potential, Electronic Structure, And Coupling Of The Tryptophan Free-Radical To The Heme Length = 297 Back     alignment and structure
>pdb|1MN2|A Chain A, Manganese Peroxidase Substrate Binding Site Mutant E35q, D179n Length = 357 Back     alignment and structure
>pdb|1DSE|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex, With Phosphate Bound, Ph 6, 100k Length = 292 Back     alignment and structure
>pdb|1DS4|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex, Ph 6, 100k Length = 292 Back     alignment and structure
>pdb|1CCE|A Chain A, Construction Of A Bis-Aquo Heme Enzyme And Replacement With Exogenous Ligand Length = 291 Back     alignment and structure
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability Length = 295 Back     alignment and structure
>pdb|1MN1|A Chain A, Manganese Peroxidase Substrate Binding Site Mutant D179n Length = 357 Back     alignment and structure
>pdb|1YYD|A Chain A, High Resolution Crystal Structure Of Manganese Peroxidase Length = 357 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query334
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 1e-114
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 1e-112
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 1e-112
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 1e-110
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 1e-109
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 1e-108
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 1e-102
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 4e-62
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 3e-57
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 5e-56
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 8e-53
2e39_A344 Peroxidase; heme protein, coordination geometry of 2e-47
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 8e-47
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 4e-45
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 4e-16
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 2e-13
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309 Back     alignment and structure
 Score =  332 bits (854), Expect = e-114
 Identities = 106/304 (34%), Positives = 169/304 (55%), Gaps = 8/304 (2%)

Query: 29  SQLQFNYYAESCPKAEDIIKQQVINLYNKHGNTAVSWVRNLFHDCIVKSCDASLLLKKAG 88
             L F++Y ++CP+AE I+++ V     K    A   +R  FHDC V+ CDAS+LL  + 
Sbjct: 7   PGLSFDFYWQTCPRAESIVREFVQEAVRKDIGLAAGLLRLHFHDCFVQGCDASVLLDGSA 66

Query: 89  GIVSEQASE--RSFGMRNFRYVDTIKEALEEECP-VTVSCADIVALSAREGIVMLGGPRI 145
               EQ +    +     F+ V+ I++ LE EC    VSC+DI+AL+AR+ +V+ GGP  
Sbjct: 67  TGPGEQQAPPNLTLRPSAFKAVNDIRDRLERECRGAVVSCSDILALAARDSVVVSGGPDY 126

Query: 146 EMKTGRRDSK-ESYFTEVDKLIPNHNDSLSTVLSAFQSTGIDVEGTVALLGAHSVGRVHC 204
            +  GRRDS+  +   +V   +P  + ++ ++L+     G+D    V + G H++G  HC
Sbjct: 127 RVPLGRRDSRSFASTQDVLSDLPGPSSNVQSLLALLGRLGLDATDLVTISGGHTIGLAHC 186

Query: 205 VNLVHRLYPTVDPSLNPEYGEYLKRRCPTPNPDPKAVLYARNDPETPMIIDNNYYKNLLN 264
            +   RL+P  DP+++P +   LKR CP    D + VL    D  TP + DN YY +L+N
Sbjct: 187 SSFEDRLFPRPDPTISPTFLSRLKRTCPAKGTDRRTVL----DVRTPNVFDNKYYIDLVN 242

Query: 265 QKGLLIVDQQLASDPRTAPFVEKMAADNGYFHQQFSRAVGLLSENNPLTEDQGEIRKDCR 324
           ++GL + DQ L ++  T P VE+ A     F +QF  ++G + +    T DQGE+R++C 
Sbjct: 243 REGLFVSDQDLFTNAITRPIVERFAQSQQDFFEQFGVSIGKMGQMRVRTSDQGEVRRNCS 302

Query: 325 YANS 328
             N 
Sbjct: 303 VRNP 306
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294 Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} PDB: 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* 1mk8_A* 1mkq_A* ... Length = 294 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query334
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 100.0
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 100.0
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 100.0
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 100.0
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 100.0
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 100.0
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 100.0
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 100.0
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 100.0
2e39_A344 Peroxidase; heme protein, coordination geometry of 100.0
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 100.0
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 100.0
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 100.0
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 100.0
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 100.0
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 100.0
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
1u2k_A309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 100.0
2cca_A740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 100.0
1itk_A731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3vli_A737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3n3r_A748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3ut2_A764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 Back     alignment and structure
Probab=100.00  E-value=3.8e-108  Score=782.40  Aligned_cols=295  Identities=34%  Similarity=0.604  Sum_probs=283.5

Q ss_pred             CCcchhhccCccHHHHHHHHHHHHHHhCCChhhhHHHHHhcccccccCCceeecccCCCCccccccccCC-CCchhHHHH
Q 045164           31 LQFNYYAESCPKAEDIIKQQVINLYNKHGNTAVSWVRNLFHDCIVKSCDASLLLKKAGGIVSEQASERSF-GMRNFRYVD  109 (334)
Q Consensus        31 l~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDcfv~GcDgSilld~~~~~~~E~~~~~N~-~L~g~~~I~  109 (334)
                      |+++||++|||++|+|||+.|++++.+||+++|++||||||||||+||||||||++++++.+|+++++|. +|+||++||
T Consensus         2 L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSiLld~t~~~~~Ek~~~~N~~~lrgf~vid   81 (304)
T 3hdl_A            2 LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANNTAEKDAIPNNPSLRGFEVIT   81 (304)
T ss_dssp             CEETTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTSSSSGGGCCCBTTBCCGGGSTTTTTTCCCHHHHH
T ss_pred             CccChhhCcCcCHHHHHHHHHHHHHHhCCcchHHHHHHheecccCCCCCeeeeecCCCCCcccccCCCcccchHHHHHHH
Confidence            7899999999999999999999999999999999999999999999999999999988888999999998 899999999


Q ss_pred             HHHHHHhhhCCCccChhhHHHhhhhhhhhhcCCCccccccCCCCCCCCcccccccCCCCCCCCHHHHHHHHHHCCCCccc
Q 045164          110 TIKEALEEECPVTVSCADIVALSAREGIVMLGGPRIEMKTGRRDSKESYFTEVDKLIPNHNDSLSTVLSAFQSTGIDVEG  189 (334)
Q Consensus       110 ~iK~~le~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~e  189 (334)
                      +||++||++||++||||||||||||+||+++|||.|+|++||+|++++...+++.+||+|+.++++|++.|++|||+.+|
T Consensus        82 ~iK~~le~~Cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~d  161 (304)
T 3hdl_A           82 AAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADE  161 (304)
T ss_dssp             HHHHHHHHHSTTTSCHHHHHHHHHHHHHHHHHCCCCCCEECCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHTTTCCHHH
T ss_pred             HHHHHHHhhCCCCccHHHHHHHHHhhhhhccCCCccccccCccCCCCCCccccccCCCCCCCCHHHHHHHHHHcCCCHHH
Confidence            99999999999999999999999999999999999999999999999998888889999999999999999999999999


Q ss_pred             ceeeecccccccccccccccccCC-----CCCCCCChHHHHHHhccCCCCCCC--CCCccccCCCCCCCCccChHHHHHh
Q 045164          190 TVALLGAHSVGRVHCVNLVHRLYP-----TVDPSLNPEYGEYLKRRCPTPNPD--PKAVLYARNDPETPMIIDNNYYKNL  262 (334)
Q Consensus       190 lVaLsGaHTiG~~hc~~f~~Rl~~-----~~dp~~d~~~~~~L~~~Cp~~~~~--~~~~~~~~~D~~tp~~FDN~Yy~~l  262 (334)
                      |||||||||||++||.+|.+|+|+     .+||+||+.|++.|++.|| ..++  +.+.  ++||+.||.+|||+||++|
T Consensus       162 ~VaLsGaHTiG~ahC~~f~~Rly~f~~~~~~DP~ld~~~a~~L~~~Cp-~~~~~~~~~~--~~lD~~TP~~FDN~Yy~nL  238 (304)
T 3hdl_A          162 MVTLSGAHSIGVAHCSSFTNRLYNFNSGSGIDPTLSPSYAALLRNTCP-ANSTRFTPIT--VSLDIITPSVLDNMYYTGV  238 (304)
T ss_dssp             HHHHGGGGGSSEEEGGGTGGGTSSCSSSSSSCTTSCHHHHHHHHHHSC-TTCCTTSCCE--EESCSSSTTSCSTHHHHHH
T ss_pred             hhhhhccccccccccchhhhhhcccCCCCCCCCcccHHHHHHHhccCC-CCCCCCCccc--cCCCCCCcccccHHHHHHH
Confidence            999999999999999999999983     5799999999999999999 4433  4445  7899999999999999999


Q ss_pred             hcccccchhhhhhccCCCcHHHHHHhhhChHHHHHHHHHHHHHhhcCCCCCCCCCccccccccccC
Q 045164          263 LNQKGLLIVDQQLASDPRTAPFVEKMAADNGYFHQQFSRAVGLLSENNPLTEDQGEIRKDCRYANS  328 (334)
Q Consensus       263 ~~~~glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~igv~tg~~GeiR~~C~~~n~  328 (334)
                      ++++|||+|||+|+.|++|+++|++||.||++|+++|++||+||++|+||||.+||||++|+++|+
T Consensus       239 ~~~~glL~SDq~L~~d~~t~~~V~~yA~~~~~F~~~Fa~AmvKmg~igv~tg~~GeIR~~C~~~N~  304 (304)
T 3hdl_A          239 QLTLGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTNCSVVNS  304 (304)
T ss_dssp             HTTCCCSHHHHGGGSSHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCC-
T ss_pred             HhCcCCCCCCHHHhcCccHHHHHHHhccCHHHHHHHHHHHHHHHHhcCCCCCCCCeeeCCccccCC
Confidence            999999999999999999999999999999999999999999999999999999999999999983
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 334
d1pa2a_306 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 3e-98
d1fhfa_304 a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m 4e-98
d1bgpa_309 a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu 1e-97
d1scha_294 a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy 8e-94
d1qgja_300 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 2e-92
d1gwua_307 a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor 2e-92
d1yyda1357 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { 7e-51
d1llpa_343 a.93.1.1 (A:) Fungal peroxidase (ligninase) {White 1e-49
d2e39a1336 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { 1e-45
d1oafa_250 a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glyci 6e-32
d2euta1291 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B 2e-31
d1iyna_275 a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco 4e-31
d1itka1406 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Arch 5e-04
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]

 Score =  290 bits (743), Expect = 3e-98
 Identities = 106/307 (34%), Positives = 151/307 (49%), Gaps = 11/307 (3%)

Query: 30  QLQFNYYAESCPKAEDIIKQQVINLYNKHGNTAVSWVRNLFHDCIVKSCDASLLLKKAGG 89
           QL   +Y+ +CP A  I++  +            S +R  FHDC V  CDAS+LL   G 
Sbjct: 2   QLNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGS 61

Query: 90  IVSEQASERSFG-MRNFRYVDTIKEALEEECPVTVSCADIVALSAREGIVMLGGPRIEMK 148
           I SE+ +  +    R F  VD IK ALE  CP  VSC+D++AL++   + + GGP   + 
Sbjct: 62  IQSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVL 121

Query: 149 TGRRDSKESYFTEVDKLIPNHNDSLSTVLSAFQSTGIDVEGTVALLGAHSVGRVHCVNLV 208
            GRRDS  +     +  IP+  +SLS +   F + G++    VAL GAH+ GR  C    
Sbjct: 122 LGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARCGVFN 181

Query: 209 HRLYP-----TVDPSLNPEYGEYLKRRCPTPNPDPKAVLYARNDPETPMIIDNNYYKNLL 263
           +RL+        DP+LN      L++ CP              D  TP   DNNY+ NL 
Sbjct: 182 NRLFNFSGTGNPDPTLNSTLLSTLQQLCPQNGSAST---ITNLDLSTPDAFDNNYFANLQ 238

Query: 264 NQKGLLIVDQQLAS--DPRTAPFVEKMAADNGYFHQQFSRAVGLLSENNPLTEDQGEIRK 321
           +  GLL  DQ+L S     T   V   A++   F Q F++++  +   +PLT   GEIR 
Sbjct: 239 SNDGLLQSDQELFSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRL 298

Query: 322 DCRYANS 328
           DC+  N 
Sbjct: 299 DCKKVNG 305
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 250 Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291 Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 406 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query334
d1fhfa_304 Plant peroxidase {Soybean (Glycine max) [TaxId: 38 100.0
d1pa2a_306 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1bgpa_309 Plant peroxidase {Barley (Hordeum vulgare), peroxi 100.0
d1qgja_300 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1gwua_307 Plant peroxidase {Horseradish (Armoracia rusticana 100.0
d1scha_294 Plant peroxidase {Peanut (Arachis hypogaea) [TaxId 100.0
d1iyna_275 Ascorbate peroxidase {Common tobacco (Nicotiana ta 100.0
d1yyda1357 Fungal peroxidase (ligninase) {Basidomycetos fungu 100.0
d1oafa_250 Ascorbate peroxidase {Soybean (Glycine max) [TaxId 100.0
d2e39a1336 Fungal peroxidase (ligninase) {Arthromyces ramosus 100.0
d1llpa_343 Fungal peroxidase (ligninase) {White rot basidiomy 100.0
d2euta1291 Cytochrome c peroxidase, CCP {Baker's yeast (Sacch 100.0
d1mwva2308 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1u2ka_292 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1itka1406 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1itka2308 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1ub2a2294 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d1mwva1406 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d2ccaa1410 Catalase-peroxidase KatG {Mycobacterium tuberculos 100.0
d1ub2a1406 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d2ccaa2285 Catalase-peroxidase KatG {Mycobacterium tuberculos 99.98
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=8.9e-103  Score=745.54  Aligned_cols=296  Identities=36%  Similarity=0.605  Sum_probs=284.2

Q ss_pred             CCCcchhhccCccHHHHHHHHHHHHHHhCCChhhhHHHHHhcccccccCCceeecccCCCCccccccccCCC-CchhHHH
Q 045164           30 QLQFNYYAESCPKAEDIIKQQVINLYNKHGNTAVSWVRNLFHDCIVKSCDASLLLKKAGGIVSEQASERSFG-MRNFRYV  108 (334)
Q Consensus        30 ~l~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDcfv~GcDgSilld~~~~~~~E~~~~~N~~-L~g~~~I  108 (334)
                      ||+.+||++|||++|+||+++|++.+.+||+++|++|||+||||||+||||||||++++++.+|+++++|.+ ++||++|
T Consensus         1 qL~~~~Y~~sCp~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSill~~~~~~~~E~~~~~N~~~~~g~~~i   80 (304)
T d1fhfa_           1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIESEQDALPNINSIRGLDVV   80 (304)
T ss_dssp             CCBTTTTTTTSTTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTTCSSSGGGCCCCSSCCCGGGSTTTTTTCCCHHHH
T ss_pred             CCCCccccccCcCHHHHHHHHHHHHHHhCCchhHHHHHHHHHhhccCCCCeeEeecCCCCccccccCCcccccchhHHHH
Confidence            799999999999999999999999999999999999999999999999999999998888889999999985 5899999


Q ss_pred             HHHHHHHhhhCCCccChhhHHHhhhhhhhhhcCCCccccccCCCCCCCCcccccccCCCCCCCCHHHHHHHHHHCCCCcc
Q 045164          109 DTIKEALEEECPVTVSCADIVALSAREGIVMLGGPRIEMKTGRRDSKESYFTEVDKLIPNHNDSLSTVLSAFQSTGIDVE  188 (334)
Q Consensus       109 ~~iK~~le~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~  188 (334)
                      |.||++||+.||++||||||||||||+||+++|||.|+|++||+|+.+|+..++..+||.|+.++++|++.|++||||.+
T Consensus        81 d~iK~~le~~cp~~VScADIlalAardAv~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~  160 (304)
T d1fhfa_          81 NDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTL  160 (304)
T ss_dssp             HHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHHTTCCHH
T ss_pred             HHHHHHHHhhCCCccCHHHHHHHHHhhhhhhcCCCcccccCCCcCcCccccccccccCCCCCCCHHHHHHHHHHcCCCHH
Confidence            99999999999999999999999999999999999999999999999998888888999999999999999999999999


Q ss_pred             cceeeecccccccccccccccccC-----CCCCCCCChHHHHHHhccCCCCCCCCCCccccCCCCCCCCccChHHHHHhh
Q 045164          189 GTVALLGAHSVGRVHCVNLVHRLY-----PTVDPSLNPEYGEYLKRRCPTPNPDPKAVLYARNDPETPMIIDNNYYKNLL  263 (334)
Q Consensus       189 elVaLsGaHTiG~~hc~~f~~Rl~-----~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~tp~~FDN~Yy~~l~  263 (334)
                      ||||||||||||++||.+|..|+|     +.+||.+|+.|+..|++.|| ..+...++  +.+|+.||.+|||+||++++
T Consensus       161 d~VaLsGaHTiG~ahc~~~~~rl~~~~~~~~~d~~~~~~~~~~L~~~c~-~~~~~~~~--~~~d~~tp~~fDn~Yy~~l~  237 (304)
T d1fhfa_         161 DLVTLSGGHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARCP-QNATGDNL--TNLDLSTPDQFDNRYYSNLL  237 (304)
T ss_dssp             HHHHHGGGGGSCEEEGGGTGGGTSCGGGSSSCCTTSCHHHHHHHHHHSC-SSCSSCCE--EESCSSSTTSCSTHHHHHHH
T ss_pred             HHHHHhhhhhhcccccccccccccCCCCCCCCCcccCHHHHHHHHHhcC-CCCCCCcc--cccCCCCCCccccHHHHHHh
Confidence            999999999999999999999999     36899999999999999999 44445556  78999999999999999999


Q ss_pred             cccccchhhhhhccCC--CcHHHHHHhhhChHHHHHHHHHHHHHhhcCCCCCCCCCccccccccccC
Q 045164          264 NQKGLLIVDQQLASDP--RTAPFVEKMAADNGYFHQQFSRAVGLLSENNPLTEDQGEIRKDCRYANS  328 (334)
Q Consensus       264 ~~~glL~SD~~L~~d~--~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~igv~tg~~GeiR~~C~~~n~  328 (334)
                      +++|+|+|||+|+.|+  +|+++|++||+||++|+++|++||+||++|+||||.+|||||+|+++|.
T Consensus       238 ~~~glL~SD~~L~~dp~~~t~~~V~~yA~d~~~F~~~F~~Am~Km~~lgv~tg~~GeiR~~C~~~N~  304 (304)
T d1fhfa_         238 QLNGLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQCNFVNG  304 (304)
T ss_dssp             TTCCSSHHHHTTTSSTTCSSHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCCC
T ss_pred             hcCcccHhhHHHHhCCCchHHHHHHHHhhCHHHHHHHHHHHHHHHhcCCCCCCCCCcccCcccCcCC
Confidence            9999999999999996  7999999999999999999999999999999999999999999999984
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure