Citrus Sinensis ID: 045212

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------37
MGIKQRIDLLISFSFFVLLTGPCYSQTDTLLPGQLLKDGDELVSAFGNFRMGFFSYMSSEDRYLGIWYHRPTDPSDSHWSYGSPKINQPVWVANRNTPIADKSGSLTIDSRDGNLKILRKGGNSIVVSSVQAMGNTSAALYETGNFVLYETNPSGSMERELWQSFDYPTDILLPGMKLGLNLQTGHGWFLRSWTSEDSPAEGEFTLNIDPNVSNQLIIQRRGEVLWTSGLFPHWRALDLDSDFHFSYTLNEKERYFNYSLNGNFTSFPTLQIDSRGSLTVTGALPISCPGSEGCVRLSSCIGYFPDDFELNWARKRGFMSVDGFKFKGSNNTSRDDCATKCLSNCSCIAFAITNENNNTACEIWSRGS
cccccEEEEEEHHHHHHHHcccccccccccccccccccccEEEccccEEEEEccccccccccEEEEEcccccccccccccccccccccEEEEcccccccccccccEEEEcccccEEEEcccccEEEEcccccccccEEEEEccccEEEEEcccccccccEEEEcccccccccccccEEccEEcccccEEEEEEccccccccccEEEEEEcccccEEEEEEccEEEEEEccccccccccccccEEEEEEEcccEEEEEEEEccccEEEEEEEEcccccEEEEEEccccccccccccccccccccccccccccccccccEEEcccccccccccccHHHHHHHHHccccccccccccccccccEEEccccc
ccHHHHHHHHHHHHHHHHHcccEEEEEcccccccEcccccEEEccccEEEEEEEcccccccEEEEEEEEEcccccccccccccccccEEEEEEccccccccccEEEEEEcccccEEEEEccccEEEEcccccccccHHEEcccccEEEEEcccccccccEEEEccccccccccccccccccccccccHHEEccccccccccccEEEEEccccccEEEEEcccEEEEEccccccEEEcccccEEEEEEEccccEEEEEEEEEccccEEEEEEEcccccEEEEEEcccccccHHHcccccccccccccccHHHHccccccEEEcccccccccEEEHHHHHHHHHHccccEEEEEcccccccEEEEEEccc
MGIKQRIDLLISFSFFVlltgpcysqtdtllpgqllkdGDELVSAFGNfrmgffsymssedrylgiwyhrptdpsdshwsygspkinqpvwvanrntpiadksgsltidsrdgNLKILRKGGNSIVVSSVQAMGNTSAALYETGnfvlyetnpsgsmerelwqsfdyptdillpgmklglnlqtghgwflrswtsedspaegeftlnidpnvsnqLIIQRRGevlwtsglfphwraldldsdfhfsytlNEKERYFnyslngnftsfptlqidsrgsltvtgalpiscpgsegcvrlsscigyfpddfelnwarkrgfmsvdgfkfkgsnntsrddcatkclsncSCIAFAITNENNNTACEIWSRGS
MGIKQRIDLLISFSFFVLLTGPCYSQTDTLLPGQLLKDGDELVSAFGNFRMGFFSYMSSEDRYLGIWYHRPTDPSDSHWSYGSPKINQPVWVANRNtpiadksgsltidsrdGNLKILRKGGNSIVVSSVQAMGNTSAALYETGNFVLYETNPSGSMERELWQSFDYPTDILLPGMKLGLNLQTGHGWFLRSWTSEDSPAEGEFTLNIDPNVSNQLIIQRRGEVLWTSGLFPHWRALDLDSDFHFSYTLNEKERYFNYSLNGNFTSFPTLQIDSRGSLTVTGALPISCPGSEGCVRLSSCIGYFPDDFELNWARKRGFMSVDGFkfkgsnntsrddcATKCLSNCSCIAFAITNENNNTACEIWSRGS
MGIKQRIDLLISFSFFVLLTGPCYSQTDTLLPGQLLKDGDELVSAFGNFRMGFFSYMSSEDRYLGIWYHRPTDPSDSHWSYGSPKINQPVWVANRNTPIADKSGSLTIDSRDGNLKILRKGGNSIVVSSVQAMGNTSAALYETGNFVLYETNPSGSMERELWQSFDYPTDILLPGMKLGLNLQTGHGWFLRSWTSEDSPAEGEFTLNIDPNVSNQLIIQRRGEVLWTSGLFPHWRALDLDSDFHFSYTLNEKERYFNYSLNGNFTSFPTLQIDSRGSLTVTGALPISCPGSEGCVRLSSCIGYFPDDFELNWARKRGFMSVDGFKFKGSNNTSRDDCATKCLSNCSCIAFAITNENNNTACEIWSRGS
*****RIDLLISFSFFVLLTGPCYSQTDTLLPGQLLKDGDELVSAFGNFRMGFFSYMSSEDRYLGIWYHRPT*****HWSYGSPKINQPVWVANRNTPI*************GNLKILRKGGNSIVVSSVQAMGNTSAALYETGNFVLYETNPSGSMERELWQSFDYPTDILLPGMKLGLNLQTGHGWFLRSWTSE****EGEFTLNIDPNVSNQLIIQRRGEVLWTSGLFPHWRALDLDSDFHFSYTLNEKERYFNYSLNGNFTSFPTLQIDSRGSLTVTGALPISCPGSEGCVRLSSCIGYFPDDFELNWARKRGFMSVDGFKFKGSNNTSRDDCATKCLSNCSCIAFAITNENNNTACEIW****
*****RI*LLISFSFFVLLTGPCYSQTDTLLPGQLLKDGDELVSAFGNFRMGFFSYMSSEDRYLGIWYHRPTDPSDSHWSYGSPKINQPVWVANRNTPIADKSGSLTIDSRDGNLKILRKGGNSIVVSSVQAMGNTSAALYETGNFVLYETNPSGSMERELWQSFDYPTDILLPGMKLGLNLQTGHGWFLRSWTSEDSPAEGEFTLNIDPNVSNQLIIQRRGEVLWTSGLFPHWRALDLDSDFHFSYTLNEKERYFNYSLNGNFTSFPTLQIDSRGSLTVTGALPISCPGSEGCVRLSSCIGYFPDDFELNWARKRGFMSVDGFKFKGSNNTSRDDCATKCLSNCSCIAFAITNENNNTACEIWSRG*
MGIKQRIDLLISFSFFVLLTGPCYSQTDTLLPGQLLKDGDELVSAFGNFRMGFFSYMSSEDRYLGIWYHRPTDPSDSHWSYGSPKINQPVWVANRNTPIADKSGSLTIDSRDGNLKILRKGGNSIVVSSVQAMGNTSAALYETGNFVLYETNPSGSMERELWQSFDYPTDILLPGMKLGLNLQTGHGWFLRSWTSEDSPAEGEFTLNIDPNVSNQLIIQRRGEVLWTSGLFPHWRALDLDSDFHFSYTLNEKERYFNYSLNGNFTSFPTLQIDSRGSLTVTGALPISCPGSEGCVRLSSCIGYFPDDFELNWARKRGFMSVDGFKFKGSNNTSRDDCATKCLSNCSCIAFAITNENNNTACEIWSRGS
MGIKQRIDLLISFSFFVLLTGPCYSQTDTLLPGQLLKDGDELVSAFGNFRMGFFSYMSSEDRYLGIWYHRPTDPSDSHWSYGSPKINQPVWVANRNTPIADKSGSLTIDSRDGNLKILRKGGNSIVVSSVQAMGNTSAALYETGNFVLYETNPSGSMERELWQSFDYPTDILLPGMKLGLNLQTGHGWFLRSWTSEDSPAEGEFTLNIDPNVSNQLIIQRRGEVLWTSGLFPHWRALDLDSDFHFSYTLNEKERYFNYSLNGNFTSFPTLQIDSRGSLTVTGALPISCPGSEGCVRLSSCIGYFPDDFELNWARKRGFMSVDGFKFKGSNNTSRDDCATKCLSNCSCIAFAITNENNNTACEIWSRG*
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGIKQRIDLLISFSFFVLLTGPCYSQTDTLLPGQLLKDGDELVSAFGNFRMGFFSYMSSEDRYLGIWYHRPTDPSDSHWSYGSPKINQPVWVANRNTPIADKSGSLTIDSRDGNLKILRKGGNSIVVSSVQAMGNTSAALYETGNFVLYETNPSGSMERELWQSFDYPTDILLPGMKLGLNLQTGHGWFLRSWTSEDSPAEGEFTLNIDPNVSNQLIIQRRGEVLWTSGLFPHWRALDLDSDFHFSYTLNEKERYFNYSLNGNFTSFPTLQIDSRGSLTVTGALPISCPGSEGCVRLSSCIGYFPDDFELNWARKRGFMSVDGFKFKGSNNTSRDDCATKCLSNCSCIAFAITNENNNTACEIWSRGS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query368 2.2.26 [Sep-21-2011]
Q9LW83 850 G-type lectin S-receptor- yes no 0.926 0.401 0.391 1e-61
O64793 818 G-type lectin S-receptor- no no 0.896 0.403 0.414 5e-60
O81832 783 G-type lectin S-receptor- no no 0.907 0.426 0.284 4e-34
O81906 849 G-type lectin S-receptor- no no 0.842 0.365 0.288 2e-30
P17840435 S-locus-specific glycopro N/A no 0.940 0.795 0.291 3e-27
P07761436 S-locus-specific glycopro N/A no 0.921 0.777 0.299 3e-26
O81833 815 G-type lectin S-receptor- no no 0.850 0.384 0.266 6e-26
Q9ZT07 833 G-type lectin S-receptor- no no 0.823 0.363 0.266 7e-26
Q9LPZ9 830 G-type lectin S-receptor- no no 0.866 0.384 0.286 1e-24
O64771 809 G-type lectin S-receptor- no no 0.899 0.409 0.268 2e-24
>sp|Q9LW83|CE101_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase CES101 OS=Arabidopsis thaliana GN=CES101 PE=2 SV=2 Back     alignment and function desciption
 Score =  237 bits (604), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 158/404 (39%), Positives = 217/404 (53%), Gaps = 63/404 (15%)

Query: 9   LLISFSFFVLLTGPCYSQTDTLLPGQLLKDGDELVSAFGNFRMGFFSYMSSEDRYLGIWY 68
            L  F+F++ L   C  QTDTLL GQ LKDG ELVSAF  F++ FF++ +S + YLGIWY
Sbjct: 7   FLTLFTFYLFLGQSC-CQTDTLLQGQYLKDGQELVSAFNIFKLKFFNFENSSNWYLGIWY 65

Query: 69  HRPTDPSDSHWSYGSPKINQPVWVANRNTPIADKSGSLTIDSRDGNLKILRKGGNSIVVS 128
           +             +  ++  VW+ANRN P+  +SGSLT+DS  G L+ILR   + + +S
Sbjct: 66  N-------------NFYLSGAVWIANRNNPVLGRSGSLTVDSL-GRLRILRGASSLLELS 111

Query: 129 SVQAMGNTSAALYETGNFVLYETNPSGSMERELWQSFDYPTDILLPGMKLGLNLQTGHGW 188
           S +  GNT+  L ++GN  L E +  GSM+R LWQSFDYPTD LLPGMKLG N++TG  W
Sbjct: 112 STETTGNTTLKLLDSGNLQLQEMDSDGSMKRTLWQSFDYPTDTLLPGMKLGFNVKTGKRW 171

Query: 189 FLRSWTSEDSPAEGEFTLNIDPNVSNQLIIQRRGEVLWTSGL-FPHWRALD-LDSD-FHF 245
            L SW  +  PA G F   +D N++N+L I   G V W SGL F    +L+ L+++ F F
Sbjct: 172 ELTSWLGDTLPASGSFVFGMDDNITNRLTILWLGNVYWASGLWFKGGFSLEKLNTNGFIF 231

Query: 246 SYTLNEKERYFNYSLNGNFTS--FPTLQIDSRGSL----------------TVTG-ALPI 286
           S+   E E YF YS + N+    FP ++ID +GSL                +V G  L  
Sbjct: 232 SFVSTESEHYFMYSGDENYGGPLFPRIRIDQQGSLQKINLDGVKKHVHCSPSVFGEELEY 291

Query: 287 SC----------------PGSEGCVRLSSCIGYFPDDFELNWARKRGFM--------SVD 322
            C                 GS  C        Y    ++L++  + G+         + +
Sbjct: 292 GCYQQNFRNCVPARYKEVTGSWDCSPFGFGYTYTRKTYDLSYCSRFGYTFRETVSPSAEN 351

Query: 323 GFKF-KGSNNTSRDDCATKCLSNCSCIAFAITNENNNTACEIWS 365
           GF F +     S  DC  KCL NCSC+A+A TN  + T CEIW+
Sbjct: 352 GFVFNEIGRRLSSYDCYVKCLQNCSCVAYASTN-GDGTGCEIWN 394
Promotes the expression of genes involved in photosynthesis at least in dedifferentiated calli.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1
>sp|O64793|Y1675_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520 OS=Arabidopsis thaliana GN=At1g67520 PE=2 SV=3 Back     alignment and function description
>sp|O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=3 SV=4 Back     alignment and function description
>sp|O81906|B120_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana GN=B120 PE=1 SV=1 Back     alignment and function description
>sp|P17840|SLSG3_BRAOL S-locus-specific glycoprotein S13 OS=Brassica oleracea GN=SLSG PE=2 SV=2 Back     alignment and function description
>sp|P07761|SLSG6_BRAOL S-locus-specific glycoprotein S6 OS=Brassica oleracea GN=SLSG PE=2 SV=2 Back     alignment and function description
>sp|O81833|SD11_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1 OS=Arabidopsis thaliana GN=SD11 PE=1 SV=1 Back     alignment and function description
>sp|Q9ZT07|RKS1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 OS=Arabidopsis thaliana GN=RKS1 PE=2 SV=3 Back     alignment and function description
>sp|Q9LPZ9|SD113_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 OS=Arabidopsis thaliana GN=SD113 PE=1 SV=2 Back     alignment and function description
>sp|O64771|Y1148_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61480 OS=Arabidopsis thaliana GN=At1g61480 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query368
255550034 789 receptor protein kinase, putative [Ricin 0.940 0.438 0.470 8e-73
255550026 795 Serine/threonine-protein kinase PBS1, pu 0.888 0.411 0.450 1e-66
15233263 850 lectin receptor kinase CES101 [Arabidops 0.926 0.401 0.391 7e-60
9294449 805 receptor kinase 1 [Arabidopsis thaliana] 0.929 0.424 0.399 4e-59
42563025 587 lectin protein kinase-like protein [Arab 0.896 0.562 0.414 2e-58
322510097 818 RecName: Full=G-type lectin S-receptor-l 0.896 0.403 0.414 3e-58
12324679 833 putative receptor protein kinase [Arabid 0.896 0.396 0.414 3e-58
297830182 767 CES101 [Arabidopsis lyrata subsp. lyrata 0.921 0.441 0.409 2e-57
359482600 789 PREDICTED: G-type lectin S-receptor-like 0.929 0.433 0.402 1e-56
397134747 852 S domain subfamily receptor-like kinase 0.921 0.397 0.4 1e-55
>gi|255550034|ref|XP_002516068.1| receptor protein kinase, putative [Ricinus communis] gi|223544973|gb|EEF46488.1| receptor protein kinase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  280 bits (716), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 176/374 (47%), Positives = 216/374 (57%), Gaps = 28/374 (7%)

Query: 9   LLISFSFFVLLTGPCYSQTDTLLPGQLLKDGDELVSAFGNFRMGFFSYMSSEDRYLGIWY 68
           +L+  S F+LL G  +S TDTLL GQ LKDGD+LVSA G F + FF    S+  YLGIWY
Sbjct: 9   ILVILSCFMLLLGSSWSVTDTLLQGQKLKDGDQLVSASGIFLLRFFR---SDKHYLGIWY 65

Query: 69  HRPTDPSDSHWSYGSPKINQPVWVANRNTPIADKSGSLTIDSRDGNLKI-LRKGGNSIVV 127
           +   +    +    S K+   VWVANRN PI DKSG LTI  RDGNLKI    GG++I +
Sbjct: 66  NMTDEQESINEFELSSKV---VWVANRNNPIVDKSGILTI-GRDGNLKISYGSGGDNISL 121

Query: 128 SSVQAMGN---TSAALYETGNFVLYETNPSGSMERELWQSFDYPTDILLPGMKLGLNLQT 184
           +SVQ  GN    +A L ++GN VL E   + S  R LWQSFDYPT  L PGMK+G+NLQT
Sbjct: 122 TSVQKSGNNTNITATLLDSGNLVLRELYTNRSASRLLWQSFDYPTHALFPGMKIGINLQT 181

Query: 185 GHGWFLRSWTSEDSPAEGEFTLNIDPNVSNQLIIQRRGEVLWTSGL-----FPHWRALDL 239
           GH W L SW +  SPA G FT  +D N  NQLII   G+V W SG      F  W  L  
Sbjct: 182 GHSWSLTSWINTQSPAIGSFTFGMDRNGMNQLIIWWAGDVYWISGNWVDGGFKFWHMLSA 241

Query: 240 DSDFHFSYTLNEKERYFNYSLNGNFTSFPTLQIDSRGSLTVTGALP-ISCPG------SE 292
              +HF Y  NE E YF Y+ + N   FP L I+  G L+ + A P ISC        + 
Sbjct: 242 QEGYHFRYFSNENETYFTYNASENAKYFPMLWINDFG-LSSSFARPLISCRSQYDYMNTI 300

Query: 293 GCVRLSSCIGYFPDDFELNWARKRGFMSVDGFKFKGSNNTSRDDCATKCLSNCSCIAFAI 352
           GCV+          +FE   A   G    D FKF  S++ S DDC  KCL NCSC+A++ 
Sbjct: 301 GCVQSRPICPKKATEFEYETAAVSG----DSFKFNESDHLSLDDCLEKCLRNCSCVAYSP 356

Query: 353 TNENNNTACEIWSR 366
           TNE + T CEIWS+
Sbjct: 357 TNEIDGTGCEIWSK 370

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255550026|ref|XP_002516064.1| Serine/threonine-protein kinase PBS1, putative [Ricinus communis] gi|223544969|gb|EEF46484.1| Serine/threonine-protein kinase PBS1, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|15233263|ref|NP_188224.1| lectin receptor kinase CES101 [Arabidopsis thaliana] gi|313118276|sp|Q9LW83.2|CE101_ARATH RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase CES101; AltName: Full=Protein CALLUS EXPRESSION OF RBCS 101; Flags: Precursor gi|332642243|gb|AEE75764.1| lectin receptor kinase CES101 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|9294449|dbj|BAB02668.1| receptor kinase 1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|42563025|ref|NP_176919.2| lectin protein kinase-like protein [Arabidopsis thaliana] gi|332196537|gb|AEE34658.1| lectin protein kinase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|322510097|sp|O64793.3|Y1675_ARATH RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520; Flags: Precursor Back     alignment and taxonomy information
>gi|12324679|gb|AAG52302.1|AC011020_9 putative receptor protein kinase [Arabidopsis thaliana] gi|3176659|gb|AAC18783.1| Strong similarity to receptor kinase gb|M80238 from A. thaliana [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297830182|ref|XP_002882973.1| CES101 [Arabidopsis lyrata subsp. lyrata] gi|297328813|gb|EFH59232.1| CES101 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|359482600|ref|XP_003632790.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase CES101-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|397134747|gb|AFO11038.1| S domain subfamily receptor-like kinase [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query368
TAIR|locus:2093397 850 CES101 "CALLUS EXPRESSION OF R 0.690 0.298 0.463 1.5e-65
TAIR|locus:2146263413 AT5G18470 [Arabidopsis thalian 0.725 0.646 0.394 1.6e-49
TAIR|locus:2131684 783 AT4G27290 [Arabidopsis thalian 0.663 0.311 0.357 3.5e-37
TAIR|locus:2141176 849 B120 [Arabidopsis thaliana (ta 0.554 0.240 0.370 2.8e-33
TAIR|locus:2141181 850 RK3 "receptor kinase 3" [Arabi 0.668 0.289 0.317 1.2e-31
TAIR|locus:2131694 815 AT4G27300 [Arabidopsis thalian 0.690 0.311 0.322 1.7e-31
TAIR|locus:2200151 830 SD1-13 "S-domain-1 13" [Arabid 0.663 0.293 0.329 4.7e-31
TAIR|locus:2059103 828 AT2G19130 [Arabidopsis thalian 0.622 0.276 0.334 2.3e-29
TAIR|locus:2200908 842 AT1G61610 [Arabidopsis thalian 0.855 0.374 0.284 9.4e-28
TAIR|locus:2088619439 AT3G12000 [Arabidopsis thalian 0.502 0.421 0.345 2.8e-25
TAIR|locus:2093397 CES101 "CALLUS EXPRESSION OF RBCS 101" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 577 (208.2 bits), Expect = 1.5e-65, Sum P(2) = 1.5e-65
 Identities = 127/274 (46%), Positives = 171/274 (62%)

Query:    10 LISFSFFVLLTGPCYSQTDTLLPGQLLKDGDELVSAFGNFRMGFFSYMSSEDRYLGIWYH 69
             L  F+F++ L   C  QTDTLL GQ LKDG ELVSAF  F++ FF++ +S + YLGIWY+
Sbjct:     8 LTLFTFYLFLGQSC-CQTDTLLQGQYLKDGQELVSAFNIFKLKFFNFENSSNWYLGIWYN 66

Query:    70 RPTDPSDSHWSYGSPKINQPVWVANRNTPIADKSGSLTIDSRDGNLKILRKGGNSIVVSS 129
                        Y    ++  VW+ANRN P+  +SGSLT+DS  G L+ILR   + + +SS
Sbjct:    67 N---------FY----LSGAVWIANRNNPVLGRSGSLTVDSL-GRLRILRGASSLLELSS 112

Query:   130 VQAMGNTSAALYETGNFVLYETNPSGSMERELWQSFDYPTDILLPGMKLGLNLQTGHGWF 189
              +  GNT+  L ++GN  L E +  GSM+R LWQSFDYPTD LLPGMKLG N++TG  W 
Sbjct:   113 TETTGNTTLKLLDSGNLQLQEMDSDGSMKRTLWQSFDYPTDTLLPGMKLGFNVKTGKRWE 172

Query:   190 LRSWTSEDSPAEGEFTLNIDPNVSNQLIIQRRGEVLWTSGL-FPHWRALD-LDSD-FHFS 246
             L SW  +  PA G F   +D N++N+L I   G V W SGL F    +L+ L+++ F FS
Sbjct:   173 LTSWLGDTLPASGSFVFGMDDNITNRLTILWLGNVYWASGLWFKGGFSLEKLNTNGFIFS 232

Query:   247 YTLNEKERYFNYSLNGNFTS--FPTLQIDSRGSL 278
             +   E E YF YS + N+    FP ++ID +GSL
Sbjct:   233 FVSTESEHYFMYSGDENYGGPLFPRIRIDQQGSL 266
GO:0004672 "protein kinase activity" evidence=IEA
GO:0004674 "protein serine/threonine kinase activity" evidence=IEA
GO:0004713 "protein tyrosine kinase activity" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0005886 "plasma membrane" evidence=ISM
GO:0006468 "protein phosphorylation" evidence=IEA
GO:0016301 "kinase activity" evidence=ISS
GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA
GO:0030246 "carbohydrate binding" evidence=IEA;ISS
TAIR|locus:2146263 AT5G18470 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2131684 AT4G27290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2141176 B120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2141181 RK3 "receptor kinase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2131694 AT4G27300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200151 SD1-13 "S-domain-1 13" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2059103 AT2G19130 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200908 AT1G61610 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2088619 AT3G12000 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00034405001
SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (770 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query368
pfam01453109 pfam01453, B_lectin, D-mannose binding lectin 2e-25
cd00028116 cd00028, B_lectin, Bulb-type mannose-specific lect 2e-20
smart00108114 smart00108, B_lectin, Bulb-type mannose-specific l 6e-18
pfam0827666 pfam08276, PAN_2, PAN-like domain 9e-08
cd0109884 cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain 4e-07
smart0047378 smart00473, PAN_AP, divergent subfamily of APPLE d 0.002
>gnl|CDD|216511 pfam01453, B_lectin, D-mannose binding lectin Back     alignment and domain information 
 Score = 98.6 bits (246), Expect = 2e-25
 Identities = 48/114 (42%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 89  PVWVANRNTPIADKSGSLTIDSRDGNLKILRKGGNSIVVSSVQAM--GNTSAALYETGNF 146
            VWVANR  P+ D S +L + S DGNL +   G   +V SS  +       A L + GN 
Sbjct: 4   VVWVANRLNPLTDSSYTLILQS-DGNLVLYD-GNGRVVWSSNTSGKGSGCVAVLQDDGNL 61

Query: 147 VLYETNPSGSMERELWQSFDYPTDILLPGMKLGLNLQTGHGWFLRSWTSEDSPA 200
           VLY+ +      + LWQSFD+PTD LLPG K G N+  G    L SW S   P+
Sbjct: 62  VLYDNS-----GKVLWQSFDHPTDTLLPGQKDG-NVVIGGSRRLTSWKSNTDPS 109

These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria. Length = 109
>gnl|CDD|237995 cd00028, B_lectin, Bulb-type mannose-specific lectin Back     alignment and domain information
>gnl|CDD|214519 smart00108, B_lectin, Bulb-type mannose-specific lectin Back     alignment and domain information
>gnl|CDD|219774 pfam08276, PAN_2, PAN-like domain Back     alignment and domain information
>gnl|CDD|238531 cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins Back     alignment and domain information
>gnl|CDD|214680 smart00473, PAN_AP, divergent subfamily of APPLE domains Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 368
PF01453114 B_lectin: D-mannose binding lectin; InterPro: IPR0 99.95
cd00028116 B_lectin Bulb-type mannose-specific lectin. The do 99.92
smart00108114 B_lectin Bulb-type mannose-specific lectin. 99.91
PF00954110 S_locus_glycop: S-locus glycoprotein family; Inter 99.57
PF0827666 PAN_2: PAN-like domain; InterPro: IPR013227 PAN do 99.53
cd0012980 PAN_APPLE PAN/APPLE-like domain; present in N-term 99.2
cd0109884 PAN_AP_plant Plant PAN/APPLE-like domain; present 99.0
smart00108114 B_lectin Bulb-type mannose-specific lectin. 98.53
cd00028116 B_lectin Bulb-type mannose-specific lectin. The do 98.44
PF01453114 B_lectin: D-mannose binding lectin; InterPro: IPR0 98.34
smart0047378 PAN_AP divergent subfamily of APPLE domains. Apple 98.19
cd0110073 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like d 97.52
PF0002479 PAN_1: PAN domain This Prosite entry concerns appl 93.39
smart0022379 APPLE APPLE domain. Four-fold repeat in plasma kal 90.62
PF1429551 PAN_4: PAN domain; PDB: 2YIL_E 2YIP_C 2YIO_A. 86.2
>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity Back     alignment and domain information 
Probab=99.95  E-value=2.5e-29  Score=211.09  Aligned_cols=107  Identities=45%  Similarity=0.743  Sum_probs=78.1

Q ss_pred             CccEEEccCCCCCCCC--CcEEEEEcCCCcEEEEecCCCcEEEEe-e-CCC--CceEEEEeeCCCEEEEecCCCCCccce
Q 045212           87 NQPVWVANRNTPIADK--SGSLTIDSRDGNLKILRKGGNSIVVSS-V-QAM--GNTSAALYETGNFVLYETNPSGSMERE  160 (368)
Q Consensus        87 ~~vVW~Anr~~pv~~~--~~~l~l~~d~G~Lvl~d~~~~~~vWss-~-~~~--~~~~a~Lld~GNlVL~~~~~~~~~~~~  160 (368)
                      ++|||+|||+.|+...  ..+|+|+.| |+|+|++ ..+..+|++ . .+.  .+..|+|+|+|||||++ . .+   ++
T Consensus         2 ~tvvW~an~~~p~~~~s~~~~L~l~~d-GnLvl~~-~~~~~iWss~~t~~~~~~~~~~~L~~~GNlvl~d-~-~~---~~   74 (114)
T PF01453_consen    2 RTVVWVANRNSPLTSSSGNYTLILQSD-GNLVLYD-SNGSVIWSSNNTSGRGNSGCYLVLQDDGNLVLYD-S-SG---NV   74 (114)
T ss_dssp             --------TTEEEEECETTEEEEEETT-SEEEEEE-TTTEEEEE--S-TTSS-SSEEEEEETTSEEEEEE-T-TS---EE
T ss_pred             cccccccccccccccccccccceECCC-CeEEEEc-CCCCEEEEecccCCccccCeEEEEeCCCCEEEEe-e-cc---eE
Confidence            6899999999999532  379999999 9999999 888899999 4 333  47899999999999998 3 44   49


Q ss_pred             eecccccCCCCcCCCCeeeeccCCCCceEEEEeCCCCCCC
Q 045212          161 LWQSFDYPTDILLPGMKLGLNLQTGHGWFLRSWTSEDSPA  200 (368)
Q Consensus       161 lWqSFd~PTDTLLPGq~L~~~~~tG~~~~LtSw~S~~dps  200 (368)
                      |||||||||||+||||+|+.+..+|.+..|+||++.+|||
T Consensus        75 lW~Sf~~ptdt~L~~q~l~~~~~~~~~~~~~sw~s~~dps  114 (114)
T PF01453_consen   75 LWQSFDYPTDTLLPGQKLGDGNVTGKNDSLTSWSSNTDPS  114 (114)
T ss_dssp             EEESTTSSS-EEEEEET--TSEEEEESTSSEEEESS----
T ss_pred             EEeecCCCccEEEeccCcccCCCccccceEEeECCCCCCC
Confidence            9999999999999999999877777666799999999996

Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....
>cd00028 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>smart00108 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation Back     alignment and domain information
>PF08276 PAN_2: PAN-like domain; InterPro: IPR013227 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions [] Back     alignment and domain information
>cd00129 PAN_APPLE PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins Back     alignment and domain information
>cd01098 PAN_AP_plant Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins Back     alignment and domain information
>smart00108 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>cd00028 B_lectin Bulb-type mannose-specific lectin Back     alignment and domain information
>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity Back     alignment and domain information
>smart00473 PAN_AP divergent subfamily of APPLE domains Back     alignment and domain information
>cd01100 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins Back     alignment and domain information
>PF00024 PAN_1: PAN domain This Prosite entry concerns apple domains, a subset of PAN domains; InterPro: IPR003014 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions [] Back     alignment and domain information
>smart00223 APPLE APPLE domain Back     alignment and domain information
>PF14295 PAN_4: PAN domain; PDB: 2YIL_E 2YIP_C 2YIO_A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query368
1xd5_A112 Gastrodianin-1, antifungal protein GAFP-1; monocot 9e-07
1kj1_A109 Lectin I, lecgna 1; BULB lectin, mannose, plant pr 6e-06
2dpf_A115 Curculin; sweet taste, taste modifying, plant prot 2e-04
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112 Back     alignment and structure
 Score = 46.1 bits (109), Expect = 9e-07
 Identities = 25/138 (18%), Positives = 43/138 (31%), Gaps = 32/138 (23%)

Query: 27  TDTLLPGQLLKDGDELVSAFGNFRMGFFSYMSSEDRYLGIWYHRPTDPSDSHWSYGSPKI 86
           +D L  G  L  G  L    G +     +     D  L ++ +                 
Sbjct: 1   SDRLNSGHQLDTGGSLAE--GGYLFIIQN-----DCNLVLYDN----------------- 36

Query: 87  NQPVWVANRNTPIADKSGSLTIDSRDGNLKILRKGGNSIVVSSVQAMGNTSAALYETGNF 146
           N+ VW +  N   +     +     DGNL I          ++ +  GN    L    N 
Sbjct: 37  NRAVWASGTNGKASGCVLKMQ---NDGNLVIYSGSRAIWASNTNRQNGNYYLILQRDRNV 93

Query: 147 VLYETNPSGSMERELWQS 164
           V+Y+ +        +W +
Sbjct: 94  VIYDNS-----NNAIWAT 106
>1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109 Back     alignment and structure
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Length = 115 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query368
3m7h_A276 Putidacin L1; monocot mannose-binding lectin, bact 100.0
1dlp_A236 Lectin scafet precursor; two-domain lectin, beta p 100.0
4h3o_A105 Lectin; cadmium, plant protein; 2.17A {Allium sati 99.85
1b2p_A119 Protein (lectin); mannose-binding lectin, monocot, 99.82
3a0c_A110 Mannose/sialic acid-binding lectin; beta-prism II, 99.81
2dpf_A115 Curculin; sweet taste, taste modifying, plant prot 99.79
1xd5_A112 Gastrodianin-1, antifungal protein GAFP-1; monocot 99.75
3dzw_A109 Agglutinin; lectin, mannobiose, mannose-alpha1, 3- 99.74
3r0e_B110 Lectin; carbohydrate binding, carbohydrate, sugar 99.69
3mez_B113 Mannose-specific lectin 3 chain 2; heterotetramer, 99.66
3r0e_A109 Lectin; carbohydrate binding, carbohydrate, sugar 99.6
3a0c_A110 Mannose/sialic acid-binding lectin; beta-prism II, 99.6
1xd5_A112 Gastrodianin-1, antifungal protein GAFP-1; monocot 99.58
1b2p_A119 Protein (lectin); mannose-binding lectin, monocot, 99.57
3mez_A111 Mannose-specific lectin 3 chain 1; heterotetramer, 99.49
2dpf_A115 Curculin; sweet taste, taste modifying, plant prot 99.48
3mez_B113 Mannose-specific lectin 3 chain 2; heterotetramer, 99.34
3mez_A111 Mannose-specific lectin 3 chain 1; heterotetramer, 99.28
3m7h_A276 Putidacin L1; monocot mannose-binding lectin, bact 99.25
3dzw_A109 Agglutinin; lectin, mannobiose, mannose-alpha1, 3- 99.16
3r0e_B110 Lectin; carbohydrate binding, carbohydrate, sugar 99.11
4h3o_A105 Lectin; cadmium, plant protein; 2.17A {Allium sati 99.02
3r0e_A109 Lectin; carbohydrate binding, carbohydrate, sugar 98.98
1dlp_A236 Lectin scafet precursor; two-domain lectin, beta p 98.63
2ll3_A82 Micronemal protein 4; cell adhesion; NMR {Toxoplas 89.4
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Back     alignment and structure
Probab=100.00  E-value=3.1e-42  Score=329.39  Aligned_cols=216  Identities=19%  Similarity=0.197  Sum_probs=169.8

Q ss_pred             ccccccccCCCCcccCCCeEEeCCCeEEEEeeeCCCCCceEEEEEEecCCCCCCCCccCCCCCCCccEEEccCCCCCCCC
Q 045212           23 CYSQTDTLLPGQLLKDGDELVSAFGNFRMGFFSYMSSEDRYLGIWYHRPTDPSDSHWSYGSPKINQPVWVANRNTPIADK  102 (368)
Q Consensus        23 ~~~~~~~l~~g~~l~~~~~lvS~~g~F~lGF~~~~~~~~~~lgIw~~~~~~~~~~~~~~~~~~~~~vVW~Anr~~pv~~~  102 (368)
                      ++++.|+|++|++|++|++|+|++|.|+||||.++   ++||   |+  +             .+ +||+|||++||.+.
T Consensus        10 ~~~~~~~l~~g~~l~~~~~l~S~~g~F~lgf~~~~---~~~l---y~--~-------------~~-vvW~Anr~~p~~~~   67 (276)
T 3m7h_A           10 NGVGTSVLPAYQTLSAGQYLLSPNQRFKLLLQGDG---NLVI---QD--N-------------GA-TVWVANEQQPFSST   67 (276)
T ss_dssp             CCTTSSEECTTEEBCTTCEEECTTSSEEEEECTTS---CEEE---EE--T-------------TE-EEEECSTTSTTEEE
T ss_pred             ccccCCEecCCCEecCCCEEEcCCCcEEEEEECCC---CeEE---EC--C-------------CC-eEEECCCCCCcCCc
Confidence            45678999999999999999999999999999432   5776   75  5             66 99999999999864


Q ss_pred             ----CcEEEEEcCCCcEEE--EecCCCcEEEEe-eCC------CCceEEEEeeCCCEEEEecCCCCCccceeecccccCC
Q 045212          103 ----SGSLTIDSRDGNLKI--LRKGGNSIVVSS-VQA------MGNTSAALYETGNFVLYETNPSGSMERELWQSFDYPT  169 (368)
Q Consensus       103 ----~~~l~l~~d~G~Lvl--~d~~~~~~vWss-~~~------~~~~~a~Lld~GNlVL~~~~~~~~~~~~lWqSFd~PT  169 (368)
                          +++|+|+.| |+|||  .| +.+.+||++ +..      .++++|+|+|+|||||++    +   ++||||  |||
T Consensus        68 ~~~~~~~l~l~~~-G~Lvl~~~~-~~~~~vWst~~~~~~~~~~~~~~~a~L~d~GNlVl~~----~---~~lWqS--~pt  136 (276)
T 3m7h_A           68 IPLRNKKAPLAFY-VQYGAFLDD-YSRRRVWLTDNSTFTSNDQWNRTHLVLQDDGNIVLVD----S---LALWNG--TPA  136 (276)
T ss_dssp             EECCCTTCCSEEE-ESSSEEEEE-GGGTEEEEECCCCCCCTTHHHHEEEEECTTSCEEEEE----E---EEEEES--CTT
T ss_pred             ccccceEEEEeCC-CcEEEEEeC-CCCCEEEEeCCCcccccccCCceEEEEeCCCCEEecC----C---ceeeCc--ccc
Confidence                679999999 99999  77 778999999 432      235789999999999996    2   499999  999


Q ss_pred             CCcCCCCeeeeccCCCCceEEEEeCCCCCCCceeEEEEEcCCCCceeEeeeC-ceeEEEcCCCCCcc-cccCCCcceEEE
Q 045212          170 DILLPGMKLGLNLQTGHGWFLRSWTSEDSPAEGEFTLNIDPNVSNQLIIQRR-GEVLWTSGLFPHWR-ALDLDSDFHFSY  247 (368)
Q Consensus       170 DTLLPGq~L~~~~~tG~~~~LtSw~S~~dps~G~fsL~l~~~g~~~l~~~~~-~~~YW~sg~~s~~~-~~~~~~~~~~~~  247 (368)
                      |||||||+|+.++++|  ..|   ++..||++|.|+|+|+++|.  +++++. ..+||++++....+ .+.......+.+
T Consensus       137 dtlLpg~~~~~~l~~g--~~L---~S~~dps~G~fsl~l~~dGn--lvLy~~~~~~yW~Sgt~~~~~~~l~l~~dGnLvl  209 (276)
T 3m7h_A          137 IPLVPGAIDSLLLAPG--SEL---VQGVVYGAGASKLVFQGDGN--LVAYGPNGAATWNAGTQGKGAVRAVFQGDGNLVV  209 (276)
T ss_dssp             SCCCCSCTTCEEECSS--EEE---CTTCEEEETTEEEEECTTSC--EEEECTTSSEEEECCCTTTTCCEEEECTTSCEEE
T ss_pred             cccccccccccccccC--ccc---ccCCCCCCceEEEeecCCce--EEEEeCCCeEEEECCCCCCccEEEEEcCCCeEEE
Confidence            9999999999998888  447   57899999999999999885  556654 58999999854332 233333444555


Q ss_pred             EEcCC-eEEEEEEeCCCCCcccEEEEccCCCEEEe
Q 045212          248 TLNEK-ERYFNYSLNGNFTSFPTLQIDSRGSLTVT  281 (368)
Q Consensus       248 ~~~~~-~~~~~~~~~~~~~~~~rl~Ld~dG~lr~~  281 (368)
                      .++.+ .++.++  .. ....+|++|+.||+|+++
T Consensus       210 ~d~~~~~vWsS~--t~-~~~~~rl~Ld~dGnLvly  241 (276)
T 3m7h_A          210 YGAGNAVLWHSH--TG-GHASAVLRLQANGSIAIL  241 (276)
T ss_dssp             ECTTSCEEEECS--CT-TCTTCEEEECTTSCEEEE
T ss_pred             EeCCCcEEEEec--CC-CCCCEEEEEcCCccEEEE
Confidence            55433 333322  22 233589999999999944
>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Back     alignment and structure
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Back     alignment and structure
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Back     alignment and structure
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Back     alignment and structure
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Back     alignment and structure
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Back     alignment and structure
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Back     alignment and structure
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Back     alignment and structure
>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Back     alignment and structure
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Back     alignment and structure
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Back     alignment and structure
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0 Back     alignment and structure
>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Back     alignment and structure
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Back     alignment and structure
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Back     alignment and structure
>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Back     alignment and structure
>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Back     alignment and structure
>2ll3_A Micronemal protein 4; cell adhesion; NMR {Toxoplasma gondii} PDB: 2ll4_M* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 368
d1kj1a_109 b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium 9e-13
d1xd5a_112 b.78.1.1 (A:) Gastrodianin (antifungal protein) {G 7e-11
d1jpca_108 b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan 8e-07
d1dlpa2120 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet 3e-06
>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Length = 109 Back     information, alignment and structure

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

 Score = 61.9 bits (150), Expect = 9e-13
 Identities = 30/141 (21%), Positives = 46/141 (32%), Gaps = 35/141 (24%)

Query: 28  DTLLPGQLLKDGDELVSAFGNFRMGFFSYMSSEDRYLGIWYHRPTDPSDSHWSYGSPKIN 87
           + L  G+ L  G  L      +           D  L ++ H                 +
Sbjct: 2   NLLTNGEGLYAGQSLDV--EPYHFIMQE-----DCNLVLYDH-----------------S 37

Query: 88  QPVWVANRNTPIADKSGSLTIDSRDGNLKILRKGGNSIVVS-SVQAMGNTSAALYETGNF 146
             VW +N             + S DGN  +    G S+  S SV+  GN    L E GN 
Sbjct: 38  TSVWASNTGILGKKGCK-AVLQS-DGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNV 95

Query: 147 VLYETNPSGSMERELWQSFDY 167
           V+Y ++        +W +  Y
Sbjct: 96  VIYGSD--------IWSTGTY 108
>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Length = 112 Back     information, alignment and structure
>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108 Back     information, alignment and structure
>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query368
d1xd5a_112 Gastrodianin (antifungal protein) {Gastrodia elata 99.85
d1kj1a_109 Lectin (agglutinin) {Garlic (Allium sativum) [TaxI 99.82
d1jpca_108 Lectin (agglutinin) {Snowdrop (Galanthus nivalis) 99.82
d1dlpa2120 Fetuin-binding protein Scafet precursor {Bluebell 99.66
d1dlpa1115 Fetuin-binding protein Scafet precursor {Bluebell 99.6
d1b2pa_119 Lectin (agglutinin) {Bluebell (Scilla campanulata) 99.56
d1dlpa1115 Fetuin-binding protein Scafet precursor {Bluebell 99.36
d1dlpa2120 Fetuin-binding protein Scafet precursor {Bluebell 99.14
d1b2pa_119 Lectin (agglutinin) {Bluebell (Scilla campanulata) 99.13
d1kj1a_109 Lectin (agglutinin) {Garlic (Allium sativum) [TaxI 98.99
d1jpca_108 Lectin (agglutinin) {Snowdrop (Galanthus nivalis) 98.98
d1xd5a_112 Gastrodianin (antifungal protein) {Gastrodia elata 98.84
d2qj2a191 Hepatocyte growth factor {Human (Homo sapiens) [Ta 84.74
>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Back     information, alignment and structure
class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

Probab=99.85  E-value=3.4e-21  Score=157.74  Aligned_cols=110  Identities=25%  Similarity=0.443  Sum_probs=89.9

Q ss_pred             ccccCCCCcccCCCeEEeCCCeEEEEeeeCCCCCceEEEEEEecCCCCCCCCccCCCCCCCccEEEccCCCCCCCCCcEE
Q 045212           27 TDTLLPGQLLKDGDELVSAFGNFRMGFFSYMSSEDRYLGIWYHRPTDPSDSHWSYGSPKINQPVWVANRNTPIADKSGSL  106 (368)
Q Consensus        27 ~~~l~~g~~l~~~~~lvS~~g~F~lGF~~~~~~~~~~lgIw~~~~~~~~~~~~~~~~~~~~~vVW~Anr~~pv~~~~~~l  106 (368)
                      +|+|.|||.|..|+.|++  |.|+|.|+.+++     |.| |.                ..++||.||++.|..  .++|
T Consensus         1 tDtL~~gq~L~~g~~l~~--g~~~l~~q~DGN-----Lvl-y~----------------~~~~vW~s~~~~~~~--~~~l   54 (112)
T d1xd5a_           1 SDRLNSGHQLDTGGSLAE--GGYLFIIQNDCN-----LVL-YD----------------NNRAVWASGTNGKAS--GCVL   54 (112)
T ss_dssp             CCEEETTEEECTTCEEEE--TTEEEEECTTSC-----EEE-EE----------------TTEEEEECCCTTSCS--SEEE
T ss_pred             CCEecCCCEecCCCEEEE--CCEEEEEcCCCC-----EEE-Ec----------------CCcEEEEccCccCCC--CcEE
Confidence            589999999999999985  899999998775     334 32                468999999998754  4689


Q ss_pred             EEEcCCCcEEEEecCCCcEEEEe-e-CCCCceEEEEeeCCCEEEEecCCCCCccceeecccccCCC
Q 045212          107 TIDSRDGNLKILRKGGNSIVVSS-V-QAMGNTSAALYETGNFVLYETNPSGSMERELWQSFDYPTD  170 (368)
Q Consensus       107 ~l~~d~G~Lvl~d~~~~~~vWss-~-~~~~~~~a~Lld~GNlVL~~~~~~~~~~~~lWqSFd~PTD  170 (368)
                      +|+.| |+|+|++ . +.++|++ + ...+..+|+|+|+|||||++  .++.   ++|||+.||++
T Consensus        55 ~l~~d-GnLvl~~-~-~~~~w~s~t~~~~~~~~l~L~ddGNlvly~--~~~~---~~W~S~t~~~n  112 (112)
T d1xd5a_          55 KMQND-GNLVIYS-G-SRAIWASNTNRQNGNYYLILQRDRNVVIYD--NSNN---AIWATHTNVGN  112 (112)
T ss_dssp             EECTT-SCEEEEE-T-TEEEEECCCCCSCCCCEEEECTTSCEEEEC--TTSC---EEEECCCCCCC
T ss_pred             EEecc-ccEEEEe-c-CCeEEEEeeccCCCceEEEEcCCCCEEEEC--CCCc---EEecCCCccCC
Confidence            99999 9999999 6 4567776 3 33456789999999999998  4554   89999999975
>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Back     information, alignment and structure
>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Back     information, alignment and structure
>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Back     information, alignment and structure
>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Back     information, alignment and structure
>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Back     information, alignment and structure
>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Back     information, alignment and structure
>d2qj2a1 g.10.1.1 (A:36-126) Hepatocyte growth factor {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure