Citrus Sinensis ID: 045250

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-----
Protein Sequence
MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN
Secondary Structure (PSIPRED)
ccccccccccHHHHHHHHHHcccccccccccccccEEEEcccccEEEEEEEEccccEEEEEEcccHHHHccccccccHHHHHHHHHHHHHHHccccccccEEEEEcccccEEEEEccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccccHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccccccHHHHHHHHHHcHHHHHHcccccccEEEEEEccccEEEEEEEEccccEEEEEccccEEEEccccccccHHHHHHHHHHHHHHHHHccccccEEEEccHHHEEEEEHccccHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccccccHHHHccc
Coil and Loop (DISEMBL)
maftefrplddkSLLEYIKatpslsskignkfddltikevgdgnLNFVYIVVGTSGSFVIKQALPYvrcigeswpmtkERAYFEALALKehgklcpdhvpevyhfdrtmsligmrylepphiILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN
Flexible Loop (DISEMBL)
maftefrplddksLLEYIKAtpslsskignkfDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN
Low Complexity Region (SEG)
MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN
Disordered region (IsUnstruct)
*************LLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRT*******
Disordered Region (DISOPRED)
***TEFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLY*********
Disordered Region (DISEMBL)
MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN
Disordered Region (DISPRO)
***TEFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTT*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	165	2.2.26 [Sep-21-2011]
Q9C6D2	420	Methylthioribose kinase O	yes	no	0.993	0.390	0.789	4e-76
Q7XR61	430	Methylthioribose kinase 1	yes	no	0.963	0.369	0.754	8e-73
Q7XR60	427	Methylthioribose kinase 2	yes	no	0.963	0.372	0.735	1e-71
B2VIQ9	399	Methylthioribose kinase O	yes	no	0.763	0.315	0.434	4e-27
A7FLL0	407	Methylthioribose kinase O	yes	no	0.775	0.314	0.442	1e-26
B1JIK2	407	Methylthioribose kinase O	yes	no	0.775	0.314	0.442	1e-26
Q66E15	407	Methylthioribose kinase O	yes	no	0.775	0.314	0.442	1e-26
B2K634	407	Methylthioribose kinase O	yes	no	0.775	0.314	0.442	1e-26
A7MKY0	399	Methylthioribose kinase O	yes	no	0.733	0.303	0.459	1e-26
A8ANI4	399	Methylthioribose kinase O	yes	no	0.715	0.295	0.479	1e-26

>sp|Q9C6D2|MTK_ARATH Methylthioribose kinase OS=Arabidopsis thaliana GN=MTK PE=1 SV=1

 Score =  283 bits (723), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 131/166 (78%), Positives = 150/166 (90%), Gaps = 2/166 (1%)

Query: 1   MAFTEFRPLDDKSLLEYIKATPSLSSKIG--NKFDDLTIKEVGDGNLNFVYIVVGTSGSF 58
           M+F EF PL++KSL++YIK+TP+LSSKIG     DDL IKEVGDGNLNFV+IVVG+SGS 
Sbjct: 1   MSFEEFTPLNEKSLVDYIKSTPALSSKIGADKSDDDLVIKEVGDGNLNFVFIVVGSSGSL 60

Query: 59  VIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLE 118
           VIKQALPY+RCIGESWPMTKERAYFEA  L++HG L PDHVPEVYHFDRTM+LIGMRYLE
Sbjct: 61  VIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFDRTMALIGMRYLE 120

Query: 119 PPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKR 164
           PPHIILRKGLIAGI+YP LA+HMS++MAKTLF+TSLLY  TTEH+R
Sbjct: 121 PPHIILRKGLIAGIEYPFLADHMSDYMAKTLFFTSLLYHDTTEHRR 166

Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate in the methionine cycle. Contributes to the maintenance of AdoMet homeostasis and is required to sustain high rates of ethylene synthesis.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 1EC: 0EC: 0

>sp|Q7XR61|MTK1_ORYSJ Methylthioribose kinase 1 OS=Oryza sativa subsp. japonica GN=MTK1 PE=2 SV=1

 Score =  272 bits (695), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 120/159 (75%), Positives = 145/159 (91%)

Query: 6   FRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALP 65
           FRPLD+ SL+ YIKATP+L++++G   D LTIKEVGDGNLNFVYIV+  +GS VIKQALP
Sbjct: 16  FRPLDEASLVAYIKATPALAARLGGSLDALTIKEVGDGNLNFVYIVLSDAGSVVIKQALP 75

Query: 66  YVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILR 125
           Y+RC+G+SWPMT+ERAYFEA AL++H  LCPDHVPEVYHFDR MSLIGMRY+EPPHIILR
Sbjct: 76  YIRCVGDSWPMTRERAYFEASALQKHRGLCPDHVPEVYHFDRAMSLIGMRYIEPPHIILR 135

Query: 126 KGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKR 164
           KGLIAG++YPLLAEHM+++MAKTLF+TSLLY +TT+HK+
Sbjct: 136 KGLIAGVEYPLLAEHMADYMAKTLFFTSLLYNSTTDHKK 174

Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|Q7XR60|MTK2_ORYSJ Methylthioribose kinase 2 OS=Oryza sativa subsp. japonica GN=MTK2 PE=2 SV=1

 Score =  268 bits (685), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 117/159 (73%), Positives = 145/159 (91%)

Query: 6   FRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALP 65
           FRPLD+ SL+ YIKATP+L++++G + D LTIKEVGDGNLNFVYIV+  +GS VIKQALP
Sbjct: 13  FRPLDEASLVAYIKATPALAARLGGRLDALTIKEVGDGNLNFVYIVLSDAGSLVIKQALP 72

Query: 66  YVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILR 125
           Y+R +G+SWPM++ERAYFEA AL++H  LCPDHVPEVYHFDR MSLIGMRY+EPPHIILR
Sbjct: 73  YIRLVGDSWPMSRERAYFEASALQKHRALCPDHVPEVYHFDRAMSLIGMRYIEPPHIILR 132

Query: 126 KGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKR 164
           KGL+AG++YPLLAEHM+++MAKTLF+TSLLY +TT+HK+
Sbjct: 133 KGLVAGVEYPLLAEHMADYMAKTLFFTSLLYNSTTDHKK 171

Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|B2VIQ9|MTNK_ERWT9 Methylthioribose kinase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=mtnK PE=3 SV=1

 Score =  120 bits (301), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 56/129 (43%), Positives = 82/129 (63%), Gaps = 3/129 (2%)

Query: 39  EVGDGNLNFVYIVVGTSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCP 96
           EVGDGNLN V+ +  T+G    ++KQALP+VRC+GESWP+T +RA  EA  L EHGK CP
Sbjct: 33  EVGDGNLNLVFRIFDTAGVSRVIVKQALPWVRCVGESWPLTLDRARLEAEVLIEHGKFCP 92

Query: 97  DHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLY 156
            H   + H+D  +++  M  L   H I R  L+ GI +P  A  + +++A+TLF+TS  +
Sbjct: 93  QHTVNILHYDPLLAVTVMEDLS-DHAIWRADLVKGIDWPQAAGQLGDYLAQTLFHTSDFF 151

Query: 157 RTTTEHKRN 165
           +   + K +
Sbjct: 152 QHPHQKKAD 160

Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.

Erwinia tasmaniensis (strain DSM 17950 / Et1/99) (taxid: 338565)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|A7FLL0|MTNK_YERP3 Methylthioribose kinase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=mtnK PE=3 SV=1

 Score =  119 bits (297), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 58/131 (44%), Positives = 81/131 (61%), Gaps = 3/131 (2%)

Query: 35  LTIKEVGDGNLNFVYIVVGTSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHG 92
           +T  E+GDGNLN V+ +  T+G    ++KQALPYVRC+GESWP+T +RA  EA  L  H 
Sbjct: 29  VTADEIGDGNLNLVFKIRDTAGISRVIVKQALPYVRCVGESWPLTLDRARIEAETLLTHS 88

Query: 93  KLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152
           + CP H  +V H D  ++++    L   H I R  LI G  YP  AE + E++A+TLF+T
Sbjct: 89  QFCPQHTVKVLHHDAELAVMVQEDLSDHH-IWRHELIQGNYYPQAAEQLGEYLAQTLFHT 147

Query: 153 SLLYRTTTEHK 163
           S  Y++    K
Sbjct: 148 SDFYQSAQAKK 158

Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.

Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) (taxid: 349747)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|B1JIK2|MTNK_YERPY Methylthioribose kinase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=mtnK PE=3 SV=1

 Score =  119 bits (297), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 58/131 (44%), Positives = 81/131 (61%), Gaps = 3/131 (2%)

Query: 35  LTIKEVGDGNLNFVYIVVGTSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHG 92
           +T  E+GDGNLN V+ +  T+G    ++KQALPYVRC+GESWP+T +RA  EA  L  H 
Sbjct: 29  VTADEIGDGNLNLVFKIRDTAGISRVIVKQALPYVRCVGESWPLTLDRARIEAETLLTHS 88

Query: 93  KLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152
           + CP H  +V H D  ++++    L   H I R  LI G  YP  AE + E++A+TLF+T
Sbjct: 89  QFCPQHTVKVLHHDAELAVMVQEDLSDHH-IWRHELIQGNYYPQAAEQLGEYLAQTLFHT 147

Query: 153 SLLYRTTTEHK 163
           S  Y++    K
Sbjct: 148 SDFYQSAQAKK 158

Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.

Yersinia pseudotuberculosis serotype O:3 (strain YPIII) (taxid: 502800)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|Q66E15|MTNK_YERPS Methylthioribose kinase OS=Yersinia pseudotuberculosis serotype I (strain IP32953) GN=mtnK PE=3 SV=1

 Score =  119 bits (297), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 58/131 (44%), Positives = 81/131 (61%), Gaps = 3/131 (2%)

Query: 35  LTIKEVGDGNLNFVYIVVGTSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHG 92
           +T  E+GDGNLN V+ +  T+G    ++KQALPYVRC+GESWP+T +RA  EA  L  H 
Sbjct: 29  VTADEIGDGNLNLVFKIRDTAGISRVIVKQALPYVRCVGESWPLTLDRARIEAETLLTHS 88

Query: 93  KLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152
           + CP H  +V H D  ++++    L   H I R  LI G  YP  AE + E++A+TLF+T
Sbjct: 89  QFCPQHTVKVLHHDAELAVMVQEDLSDHH-IWRHELIQGNYYPQAAEQLGEYLAQTLFHT 147

Query: 153 SLLYRTTTEHK 163
           S  Y++    K
Sbjct: 148 SDFYQSAQAKK 158

Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.

Yersinia pseudotuberculosis (taxid: 633)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|B2K634|MTNK_YERPB Methylthioribose kinase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=mtnK PE=3 SV=1

 Score =  119 bits (297), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 58/131 (44%), Positives = 81/131 (61%), Gaps = 3/131 (2%)

Query: 35  LTIKEVGDGNLNFVYIVVGTSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHG 92
           +T  E+GDGNLN V+ +  T+G    ++KQALPYVRC+GESWP+T +RA  EA  L  H 
Sbjct: 29  VTADEIGDGNLNLVFKIRDTAGISRVIVKQALPYVRCVGESWPLTLDRARIEAETLLTHS 88

Query: 93  KLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152
           + CP H  +V H D  ++++    L   H I R  LI G  YP  AE + E++A+TLF+T
Sbjct: 89  QFCPQHTVKVLHHDAELAVMVQEDLSDHH-IWRHELIQGNYYPQAAEQLGEYLAQTLFHT 147

Query: 153 SLLYRTTTEHK 163
           S  Y++    K
Sbjct: 148 SDFYQSAQAKK 158

Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.

Yersinia pseudotuberculosis serotype IB (strain PB1/+) (taxid: 502801)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|A7MKY0|MTNK_CROS8 Methylthioribose kinase OS=Cronobacter sakazakii (strain ATCC BAA-894) GN=mtnK PE=3 SV=2

 Score =  119 bits (297), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 57/124 (45%), Positives = 81/124 (65%), Gaps = 3/124 (2%)

Query: 35  LTIKEVGDGNLNFVYIVVGTSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHG 92
           ++ +EVGDGNLN V+ +    G    V+KQALPYVRC+GESWP+T +RA  EA  L  H 
Sbjct: 29  VSAQEVGDGNLNLVFKIFDKQGISRIVVKQALPYVRCVGESWPLTLDRARLEAQTLVAHY 88

Query: 93  KLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152
           + CP H  +++H+D T++++ M  L   H I R  LI G+ YP  A  + E++A+TLF+T
Sbjct: 89  QHCPAHTVKIHHYDPTLAVMVMEDLS-DHRIWRGELIKGVHYPQAARQLGEYLAQTLFHT 147

Query: 153 SLLY 156
           S  Y
Sbjct: 148 SDFY 151

Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.

Cronobacter sakazakii (strain ATCC BAA-894) (taxid: 290339)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

>sp|A8ANI4|MTNK_CITK8 Methylthioribose kinase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=mtnK PE=3 SV=2

 Score =  119 bits (297), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 58/121 (47%), Positives = 79/121 (65%), Gaps = 3/121 (2%)

Query: 38  KEVGDGNLNFVYIVVGTSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLC 95
           +EVGDGNLN V+ +  T+G    V+KQALPYVRC+GESWP+T +RA  EA  L  H + C
Sbjct: 32  QEVGDGNLNLVFKIFDTTGVSRIVVKQALPYVRCVGESWPLTLDRARLEAQTLVAHYQHC 91

Query: 96  PDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLL 155
           P H  +++HFD  ++++ M  L   H I R  LI G  YP  A  + E++A+TLF+TS  
Sbjct: 92  PQHTVKIHHFDPELAVMVMEDL-SDHNIWRGELIKGAWYPQAARQLGEYLAQTLFHTSDF 150

Query: 156 Y 156
           Y
Sbjct: 151 Y 151

Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.

Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) (taxid: 290338)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 1

EC: 0

EC: 0

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	165
452090896	417	5-methylthioribose kinase [Prunus persic	0.993	0.393	0.859	3e-82
224056200	418	predicted protein [Populus trichocarpa]	1.0	0.394	0.848	4e-80
255555259	424	Methylthioribose kinase, putative [Ricin	0.993	0.386	0.829	7e-78
225429289	419	PREDICTED: methylthioribose kinase [Viti	0.993	0.391	0.823	2e-77
356536154	417	PREDICTED: methylthioribose kinase-like	1.0	0.395	0.793	4e-77
255636278	417	unknown [Glycine max]	1.0	0.395	0.793	4e-77
356575680	417	PREDICTED: methylthioribose kinase 1-lik	1.0	0.395	0.793	4e-77
255635020	417	unknown [Glycine max]	1.0	0.395	0.793	4e-77
118488207	418	unknown [Populus trichocarpa]	1.0	0.394	0.806	6e-77
224103675	418	predicted protein [Populus trichocarpa]	1.0	0.394	0.806	7e-77

>gi|452090896|gb|AGF95119.1| 5-methylthioribose kinase [Prunus persica]

 Score =  309 bits (791), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 141/164 (85%), Positives = 159/164 (96%)

Query: 1   MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVI 60
           MAF+EFRPLD+K L+EYIKATPSLSSK+ NKFD+LTIKEVGDGNLNFV+IVVG++GSFVI
Sbjct: 1   MAFSEFRPLDEKVLIEYIKATPSLSSKLNNKFDNLTIKEVGDGNLNFVFIVVGSTGSFVI 60

Query: 61  KQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPP 120
           KQALPY+RCIGESWPMTKERAYFEALAL+EHG L PDHVPEVYHFDRTMSLIGMRYLEPP
Sbjct: 61  KQALPYIRCIGESWPMTKERAYFEALALREHGGLSPDHVPEVYHFDRTMSLIGMRYLEPP 120

Query: 121 HIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKR 164
           HIILRKGLIAGI+YPLLA+HMS+++A+TLF+TSLLYR TT+HKR
Sbjct: 121 HIILRKGLIAGIEYPLLADHMSDYIARTLFFTSLLYRNTTDHKR 164

Source: Prunus persica

Species: Prunus persica

Genus: Prunus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224056200|ref|XP_002298752.1| predicted protein [Populus trichocarpa] gi|222846010|gb|EEE83557.1| predicted protein [Populus trichocarpa]

 Score =  302 bits (773), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 140/165 (84%), Positives = 154/165 (93%)

Query: 1   MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVI 60
           MAFTEFRPL +KSL+EYIKAT  LS KIGN F DL IKEVGDGNLNFVYIV   SGSFVI
Sbjct: 1   MAFTEFRPLAEKSLIEYIKATSVLSDKIGNNFGDLKIKEVGDGNLNFVYIVASPSGSFVI 60

Query: 61  KQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPP 120
           KQALPY+RCIGESWPMTKERAYFEALAL+EHG+LCP++VPEVYHFDRTMS+I MRYLEPP
Sbjct: 61  KQALPYIRCIGESWPMTKERAYFEALALREHGRLCPENVPEVYHFDRTMSVIAMRYLEPP 120

Query: 121 HIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN 165
           HIILRKGLIAGI+YPLLAEHMS+++AKTL+YTSLLYRTTTEHKR+
Sbjct: 121 HIILRKGLIAGIEYPLLAEHMSDYIAKTLYYTSLLYRTTTEHKRD 165

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255555259|ref|XP_002518666.1| Methylthioribose kinase, putative [Ricinus communis] gi|223542047|gb|EEF43591.1| Methylthioribose kinase, putative [Ricinus communis]

 Score =  294 bits (753), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 136/164 (82%), Positives = 151/164 (92%)

Query: 1   MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVI 60
           MAF+EFRPLD+KSL+EYI+ TP L++KIG+KFDDL IKEVGDGNLNFVYIVV + GSFVI
Sbjct: 1   MAFSEFRPLDEKSLIEYIRGTPVLANKIGDKFDDLKIKEVGDGNLNFVYIVVSSDGSFVI 60

Query: 61  KQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPP 120
           KQALPY+RCIGESWPMTKERAYFEA  LKEHG+LCP+HVP+VYHFD TM LIGMRYLEPP
Sbjct: 61  KQALPYIRCIGESWPMTKERAYFEARTLKEHGRLCPEHVPDVYHFDHTMCLIGMRYLEPP 120

Query: 121 HIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKR 164
           HIILRKGLI G +YP LAEHMS++MAKTLFYTSLLY TTTEHKR
Sbjct: 121 HIILRKGLIGGHEYPHLAEHMSDYMAKTLFYTSLLYLTTTEHKR 164

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429289|ref|XP_002269154.1| PREDICTED: methylthioribose kinase [Vitis vinifera] gi|147818771|emb|CAN73920.1| hypothetical protein VITISV_028622 [Vitis vinifera] gi|296083117|emb|CBI22521.3| unnamed protein product [Vitis vinifera]

 Score =  293 bits (749), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 135/164 (82%), Positives = 149/164 (90%)

Query: 1   MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVI 60
           MA + FRPLDDKSL+EYIKATP+LSSK+ N+ D L IKEVGDGNLNFVYIV+ +SGSFVI
Sbjct: 1   MASSGFRPLDDKSLIEYIKATPALSSKLANQLDGLQIKEVGDGNLNFVYIVISSSGSFVI 60

Query: 61  KQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPP 120
           KQALPY+RCIGESWPMTKERAYFEA AL+E  + C DHVPEVYHFDR M+LIGMRYLEPP
Sbjct: 61  KQALPYIRCIGESWPMTKERAYFEATALREQRRWCSDHVPEVYHFDREMALIGMRYLEPP 120

Query: 121 HIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKR 164
           HIILRKGLIAGI+YPLLAEHMSEFMA+TLF+TSLLY  TTEHKR
Sbjct: 121 HIILRKGLIAGIEYPLLAEHMSEFMARTLFFTSLLYHDTTEHKR 164

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356536154|ref|XP_003536604.1| PREDICTED: methylthioribose kinase-like [Glycine max]

 Score =  292 bits (747), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 131/165 (79%), Positives = 155/165 (93%)

Query: 1   MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVI 60
           M+ +EFRPLDDK L+EYIK+ P+LSSK+ + FDDL++KEVGDGNLNFV+IV   +GSFVI
Sbjct: 1   MSLSEFRPLDDKFLIEYIKSVPALSSKLADNFDDLSVKEVGDGNLNFVFIVSNPAGSFVI 60

Query: 61  KQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPP 120
           KQALPYVRCIGESWPMTKERAYFE+LALKE G+L P+HVPEVYHFDRTMSLIGMRYLEPP
Sbjct: 61  KQALPYVRCIGESWPMTKERAYFESLALKEEGRLSPEHVPEVYHFDRTMSLIGMRYLEPP 120

Query: 121 HIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN 165
           HIILRKGLIAGI+YPLLA+HM++FMAKTLF+TSLL+R+T++HKR+
Sbjct: 121 HIILRKGLIAGIEYPLLAQHMADFMAKTLFFTSLLFRSTSDHKRD 165

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255636278|gb|ACU18479.1| unknown [Glycine max]

 Score =  292 bits (747), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 131/165 (79%), Positives = 155/165 (93%)

Query: 1   MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVI 60
           M+ +EFRPLDDK L+EYIK+ P+LSSK+ + FDDL++KEVGDGNLNFV+IV   +GSFVI
Sbjct: 1   MSLSEFRPLDDKFLIEYIKSVPALSSKLADNFDDLSVKEVGDGNLNFVFIVSNPAGSFVI 60

Query: 61  KQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPP 120
           KQALPYVRCIGESWPMTKERAYFE+LALKE G+L P+HVPEVYHFDRTMSLIGMRYLEPP
Sbjct: 61  KQALPYVRCIGESWPMTKERAYFESLALKEEGRLSPEHVPEVYHFDRTMSLIGMRYLEPP 120

Query: 121 HIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN 165
           HIILRKGLIAGI+YPLLA+HM++FMAKTLF+TSLL+R+T++HKR+
Sbjct: 121 HIILRKGLIAGIEYPLLAQHMADFMAKTLFFTSLLFRSTSDHKRD 165

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356575680|ref|XP_003555966.1| PREDICTED: methylthioribose kinase 1-like [Glycine max]

 Score =  291 bits (746), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 131/165 (79%), Positives = 153/165 (92%)

Query: 1   MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVI 60
           M+F+EFRPLDD SL+EYIK+ P+LSSK+ +  DDL++KEVGDGNLNFV+IV   +GSFVI
Sbjct: 1   MSFSEFRPLDDTSLIEYIKSVPALSSKLADNLDDLSVKEVGDGNLNFVFIVSNPAGSFVI 60

Query: 61  KQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPP 120
           KQALPYVRCIGESWPMTKERAYFE+LALKE G+L P+HVPEVYHFDRTMSLIGMRYLEPP
Sbjct: 61  KQALPYVRCIGESWPMTKERAYFESLALKEEGRLIPEHVPEVYHFDRTMSLIGMRYLEPP 120

Query: 121 HIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN 165
           HIILRKGLIAGI+YP LAEHM++FMAKTLF+TSLL+R+T +HKR+
Sbjct: 121 HIILRKGLIAGIEYPFLAEHMADFMAKTLFFTSLLFRSTADHKRD 165

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255635020|gb|ACU17868.1| unknown [Glycine max]

 Score =  291 bits (746), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 131/165 (79%), Positives = 153/165 (92%)

Query: 1   MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVI 60
           M+F+EFRPLDD SL+EYIK+ P+LSSK+ +  DDL++KEVGDGNLNFV+IV   +GSFVI
Sbjct: 1   MSFSEFRPLDDTSLIEYIKSVPALSSKLADNLDDLSVKEVGDGNLNFVFIVSNPAGSFVI 60

Query: 61  KQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPP 120
           KQALPYVRCIGESWPMTKERAYFE+LALKE G+L P+HVPEVYHFDRTMSLIGMRYLEPP
Sbjct: 61  KQALPYVRCIGESWPMTKERAYFESLALKEEGRLIPEHVPEVYHFDRTMSLIGMRYLEPP 120

Query: 121 HIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN 165
           HIILRKGLIAGI+YP LAEHM++FMAKTLF+TSLL+R+T +HKR+
Sbjct: 121 HIILRKGLIAGIEYPFLAEHMADFMAKTLFFTSLLFRSTADHKRD 165

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118488207|gb|ABK95923.1| unknown [Populus trichocarpa]

 Score =  291 bits (745), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 133/165 (80%), Positives = 152/165 (92%)

Query: 1   MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVI 60
           M FTEFRPLD+K L+EYIKATP+LS KIGN FDDL IKEVGDGNLNFVYIVV  +GSFVI
Sbjct: 1   MVFTEFRPLDEKYLVEYIKATPALSDKIGNNFDDLKIKEVGDGNLNFVYIVVSPAGSFVI 60

Query: 61  KQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPP 120
           KQA+PY+RCIGESWPMTKERAYFEAL L+EHG+  P++VPEVYHFDR MS+IGMRYLEPP
Sbjct: 61  KQAIPYIRCIGESWPMTKERAYFEALTLREHGRWSPENVPEVYHFDRIMSVIGMRYLEPP 120

Query: 121 HIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN 165
           HIILRKGL+AGI+YPLLAEH+S++MAKTL++TSLL+ TTTEHK N
Sbjct: 121 HIILRKGLVAGIEYPLLAEHISDYMAKTLYHTSLLFHTTTEHKHN 165

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103675|ref|XP_002313150.1| predicted protein [Populus trichocarpa] gi|222849558|gb|EEE87105.1| predicted protein [Populus trichocarpa]

 Score =  291 bits (745), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 133/165 (80%), Positives = 152/165 (92%)

Query: 1   MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVI 60
           M FTEFRPLD+K L+EYIKATP+LS KIGN FDDL IKEVGDGNLNFVYIVV  +GSFVI
Sbjct: 1   MVFTEFRPLDEKYLVEYIKATPALSDKIGNNFDDLKIKEVGDGNLNFVYIVVSPAGSFVI 60

Query: 61  KQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPP 120
           KQA+PY+RCIGESWPMTKERAYFEAL L+EHG+  P++VPEVYHFDR MS+IGMRYLEPP
Sbjct: 61  KQAIPYIRCIGESWPMTKERAYFEALTLREHGRWSPENVPEVYHFDRIMSVIGMRYLEPP 120

Query: 121 HIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN 165
           HIILRKGL+AGI+YPLLAEH+S++MAKTL++TSLL+ TTTEHK N
Sbjct: 121 HIILRKGLVAGIEYPLLAEHISDYMAKTLYHTSLLFHTTTEHKHN 165

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	165
TAIR|locus:2007253	420	MTK "S-methyl-5-thioribose kin	0.993	0.390	0.795	1.8e-69
UNIPROTKB|Q7XR61	430	MTK1 "Methylthioribose kinase	0.963	0.369	0.754	2.2e-66
UNIPROTKB|Q81MJ5	393	mtnK "Methylthioribose kinase"	0.751	0.315	0.444	4.8e-23
TIGR_CMR|BA_4252	393	BA_4252 "5-methylthioribose ki	0.751	0.315	0.444	4.8e-23
UNIPROTKB|Q81ZC3	409	mtnK "Methylthioribose kinase"	0.921	0.371	0.325	1e-11
TIGR_CMR|BA_0346	409	BA_0346 "5-methylthioribose ki	0.921	0.371	0.325	1e-11

TAIR|locus:2007253 MTK "S-methyl-5-thioribose kinase" [Arabidopsis thaliana (taxid:3702)]

 Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
 Identities = 132/166 (79%), Positives = 152/166 (91%)

Query:     1 MAFTEFRPLDDKSLLEYIKATPSLSSKIG-NKFDD-LTIKEVGDGNLNFVYIVVGTSGSF 58
             M+F EF PL++KSL++YIK+TP+LSSKIG +K DD L IKEVGDGNLNFV+IVVG+SGS 
Sbjct:     1 MSFEEFTPLNEKSLVDYIKSTPALSSKIGADKSDDDLVIKEVGDGNLNFVFIVVGSSGSL 60

Query:    59 VIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLE 118
             VIKQALPY+RCIGESWPMTKERAYFEA  L++HG L PDHVPEVYHFDRTM+LIGMRYLE
Sbjct:    61 VIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFDRTMALIGMRYLE 120

Query:   119 PPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKR 164
             PPHIILRKGLIAGI+YP LA+HMS++MAKTLF+TSLLY  TTEH+R
Sbjct:   121 PPHIILRKGLIAGIEYPFLADHMSDYMAKTLFFTSLLYHDTTEHRR 166

GO:0009086 "methionine biosynthetic process" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046522 "S-methyl-5-thioribose kinase activity" evidence=IEA;ISS;IDA;IMP

GO:0019509 "L-methionine salvage from methylthioadenosine" evidence=TAS

GO:0042802 "identical protein binding" evidence=IPI

GO:0071281 "cellular response to iron ion" evidence=IEP

GO:0071369 "cellular response to ethylene stimulus" evidence=IEP

GO:0071732 "cellular response to nitric oxide" evidence=IEP

GO:0005829 "cytosol" evidence=IDA

UNIPROTKB|Q7XR61 MTK1 "Methylthioribose kinase 1" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 675 (242.7 bits), Expect = 2.2e-66, P = 2.2e-66
 Identities = 120/159 (75%), Positives = 145/159 (91%)

Query:     6 FRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALP 65
             FRPLD+ SL+ YIKATP+L++++G   D LTIKEVGDGNLNFVYIV+  +GS VIKQALP
Sbjct:    16 FRPLDEASLVAYIKATPALAARLGGSLDALTIKEVGDGNLNFVYIVLSDAGSVVIKQALP 75

Query:    66 YVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILR 125
             Y+RC+G+SWPMT+ERAYFEA AL++H  LCPDHVPEVYHFDR MSLIGMRY+EPPHIILR
Sbjct:    76 YIRCVGDSWPMTRERAYFEASALQKHRGLCPDHVPEVYHFDRAMSLIGMRYIEPPHIILR 135

Query:   126 KGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKR 164
             KGLIAG++YPLLAEHM+++MAKTLF+TSLLY +TT+HK+
Sbjct:   136 KGLIAGVEYPLLAEHMADYMAKTLFFTSLLYNSTTDHKK 174

GO:0046522 "S-methyl-5-thioribose kinase activity" evidence=IDA

UNIPROTKB|Q81MJ5 mtnK "Methylthioribose kinase" [Bacillus anthracis (taxid:1392)]

 Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
 Identities = 56/126 (44%), Positives = 81/126 (64%)

Query:    39 EVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDH 98
             E+GDGNLN+V+ +     S +IKQALPY + +GESWP++ +RA  E+ AL+   K  P++
Sbjct:    31 EIGDGNLNYVFKLDDGEKSIIIKQALPYAKVVGESWPLSIKRATIESKALQIFAKYVPEY 90

Query:    99 VPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRT 158
             VP VY  D  +++  +  L     I RKGLI G +YPLL++H+  F+A  LFYTS  +  
Sbjct:    91 VPVVYSHDEELAVTVIEDLSRL-TITRKGLIDGEEYPLLSQHIGRFLANVLFYTSD-FGL 148

Query:   159 TTEHKR 164
              +E KR
Sbjct:   149 QSEEKR 154

GO:0009086 "methionine biosynthetic process" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

TIGR_CMR|BA_4252 BA_4252 "5-methylthioribose kinase, putative" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
 Identities = 56/126 (44%), Positives = 81/126 (64%)

Query:    39 EVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDH 98
             E+GDGNLN+V+ +     S +IKQALPY + +GESWP++ +RA  E+ AL+   K  P++
Sbjct:    31 EIGDGNLNYVFKLDDGEKSIIIKQALPYAKVVGESWPLSIKRATIESKALQIFAKYVPEY 90

Query:    99 VPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRT 158
             VP VY  D  +++  +  L     I RKGLI G +YPLL++H+  F+A  LFYTS  +  
Sbjct:    91 VPVVYSHDEELAVTVIEDLSRL-TITRKGLIDGEEYPLLSQHIGRFLANVLFYTSD-FGL 148

Query:   159 TTEHKR 164
              +E KR
Sbjct:   149 QSEEKR 154

GO:0009086 "methionine biosynthetic process" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

UNIPROTKB|Q81ZC3 mtnK "Methylthioribose kinase" [Bacillus anthracis (taxid:1392)]

 Score = 166 (63.5 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 54/166 (32%), Positives = 83/166 (50%)

Query:     3 FTEFRPLDDKSLLEYIKATPSLSSKIGNKFDD---LTIKEVGDGNLNFVYIVVGTSG--S 57
             FT++  ++   ++ Y+K       K+  KF+    L  KE+GDGNLN+V+ V       S
Sbjct:     4 FTKYFLMEANDVIVYVK------EKLC-KFEHAKGLQCKEIGDGNLNYVFRVWDEQKNIS 56

Query:    58 FVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYL 117
              ++KQA    R I + + ++  R   E+  L+   +L P  VP+VY FD  M+   M  L
Sbjct:    57 VIVKQAGDTAR-ISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLFDSVMNCCVMEDL 115

Query:   118 EPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHK 163
                H ILR  LI    +P LA+ ++ F+  TL  TS +     E K
Sbjct:   116 SD-HTILRTALINHEIFPRLADDLTTFLVNTLLLTSDVVMNHKEKK 160

GO:0009086 "methionine biosynthetic process" evidence=ISS

GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=ISS

TIGR_CMR|BA_0346 BA_0346 "5-methylthioribose kinase, putative" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 166 (63.5 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 54/166 (32%), Positives = 83/166 (50%)

Query:     3 FTEFRPLDDKSLLEYIKATPSLSSKIGNKFDD---LTIKEVGDGNLNFVYIVVGTSG--S 57
             FT++  ++   ++ Y+K       K+  KF+    L  KE+GDGNLN+V+ V       S
Sbjct:     4 FTKYFLMEANDVIVYVK------EKLC-KFEHAKGLQCKEIGDGNLNYVFRVWDEQKNIS 56

Query:    58 FVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYL 117
              ++KQA    R I + + ++  R   E+  L+   +L P  VP+VY FD  M+   M  L
Sbjct:    57 VIVKQAGDTAR-ISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLFDSVMNCCVMEDL 115

Query:   118 EPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHK 163
                H ILR  LI    +P LA+ ++ F+  TL  TS +     E K
Sbjct:   116 SD-HTILRTALINHEIFPRLADDLTTFLVNTLLLTSDVVMNHKEKK 160


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.139   0.417    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      165       165   0.00093  107 3  11 22  0.49    31
                                                     30  0.45    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  597 (63 KB)
  Total size of DFA:  150 KB (2090 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.77u 0.17s 15.94t   Elapsed:  00:00:00
  Total cpu time:  15.77u 0.17s 15.94t   Elapsed:  00:00:00
  Start:  Sat May 11 08:09:50 2013   End:  Sat May 11 08:09:50 2013

GO:0009086 "methionine biosynthetic process" evidence=ISS

GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9C6D2	MTK_ARATH	2, ., 7, ., 1, ., 1, 0, 0	0.7891	0.9939	0.3904	yes	no
Q7XR60	MTK2_ORYSJ	2, ., 7, ., 1, ., 1, 0, 0	0.7358	0.9636	0.3723	yes	no
Q7XR61	MTK1_ORYSJ	2, ., 7, ., 1, ., 1, 0, 0	0.7547	0.9636	0.3697	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.1.100	0.824
3rd Layer	2.7.1	0.766

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	fgenesh4_pm.C_LG_I001056	S-methyl-5-thioribose kinase (EC-2.7.1.100) (418 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_fgenesh4_pm.C_LG_VI0635	hypothetical protein (384 aa)	•	•	•			•	•		0.963
	eugene3.121520001	Predicted protein (251 aa)						•	•		0.592

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	165
PLN02756	418	PLN02756, PLN02756, S-methyl-5-thioribose kinase	1e-122
PRK09550	401	PRK09550, mtnK, methylthioribose kinase; Reviewed	9e-72
COG4857	408	COG4857, COG4857, Predicted kinase [General functi	6e-47
TIGR01767	370	TIGR01767, MTRK, 5-methylthioribose kinase	2e-46
PRK12396	409	PRK12396, PRK12396, 5-methylribose kinase; Reviewe	5e-21
pfam01636	238	pfam01636, APH, Phosphotransferase enzyme family	0.001

>gnl|CDD|166397 PLN02756, PLN02756, S-methyl-5-thioribose kinase

 Score =  351 bits (901), Expect = e-122
 Identities = 144/165 (87%), Positives = 157/165 (95%)

Query: 1   MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVI 60
           MAF+EFRPLD+KSL+EYIKATP+LSSKIGN  DDL IKEVGDGNLNFVYIVV +SGSFVI
Sbjct: 1   MAFSEFRPLDEKSLVEYIKATPALSSKIGNDLDDLKIKEVGDGNLNFVYIVVSSSGSFVI 60

Query: 61  KQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPP 120
           KQALPY+RCIGESWPMTKERAYFEA AL+EHG+LCPDHVPEVYHFDRTM+LIGMRYLEPP
Sbjct: 61  KQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRTMALIGMRYLEPP 120

Query: 121 HIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN 165
           HIILRKGLIAGI+YPLLAEHMS++MAKTLF+TSLLY  TTEHKR 
Sbjct: 121 HIILRKGLIAGIEYPLLAEHMSDYMAKTLFFTSLLYHDTTEHKRA 165

Length = 418

>gnl|CDD|236561 PRK09550, mtnK, methylthioribose kinase; Reviewed

 Score =  220 bits (564), Expect = 9e-72
 Identities = 77/165 (46%), Positives = 102/165 (61%), Gaps = 7/165 (4%)

Query: 3   FTEFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSG--SFVI 60
            + +  L ++  +EY      L   + +    LT +E+GDGNLN V+ V  T G  S ++
Sbjct: 1   MSGYETLTEEDAVEYAA----LKLGLFDPKALLTAREIGDGNLNLVFRVSDTEGGKSVIV 56

Query: 61  KQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPP 120
           KQALPYVR +GESWP+T +RA  EA ALK   K  PD VP+VYH+D  +++  M  L   
Sbjct: 57  KQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDEELAVTVMEDLS-D 115

Query: 121 HIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN 165
           H ILRKGLI G KYP LAEH+ EF+A+TLFYTS    ++ E K  
Sbjct: 116 HKILRKGLIDGKKYPKLAEHIGEFLARTLFYTSDFGLSSEEKKAL 160

Length = 401

>gnl|CDD|227194 COG4857, COG4857, Predicted kinase [General function prediction only]

 Score =  156 bits (397), Expect = 6e-47
 Identities = 70/162 (43%), Positives = 99/162 (61%), Gaps = 5/162 (3%)

Query: 6   FRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSG--SFVIKQA 63
           F  L D++L   +    +L+ KIG     LT+KE+GDGNLN+V+IV G  G  + ++KQA
Sbjct: 6   FEALSDETLSYGVNV--ALNLKIGPNKSHLTVKEIGDGNLNYVFIVEGKIGGKAAIVKQA 63

Query: 64  LPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPPHII 123
           LPYVR +GESWP+  +R++ E  AL+      P  VPE+Y FD  M++I M  L  PH I
Sbjct: 64  LPYVRLVGESWPLPLKRSFIEYHALRRQNARAPHFVPEIYFFDEIMAVIVMEDLS-PHKI 122

Query: 124 LRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN 165
           LR+ LI G   P + + + EF+A+TLF  S L   T + K +
Sbjct: 123 LRRALIDGRILPNIVDDIGEFLARTLFRGSDLSMNTKDKKAD 164

Length = 408

>gnl|CDD|130828 TIGR01767, MTRK, 5-methylthioribose kinase

 Score =  154 bits (391), Expect = 2e-46
 Identities = 63/128 (49%), Positives = 80/128 (62%), Gaps = 3/128 (2%)

Query: 38  KEVGDGNLNFVYIVVGTSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLC 95
           +EVGDGNLN V+ V    G  + ++KQALPYVR +GESWP+T +RA  E+ AL   G+  
Sbjct: 1   QEVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHV 60

Query: 96  PDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLL 155
           P  VP ++HFD  M++  M  L   H I RKGLI G  YP LA H+ EF+AKTLFY+S  
Sbjct: 61  PHLVPRIFHFDTEMAVTVMEDLS-HHKIARKGLIEGENYPHLARHIGEFLAKTLFYSSDY 119

Query: 156 YRTTTEHK 163
                  K
Sbjct: 120 ALEPKVKK 127

This enzyme is involved in the methionine salvage pathway in certain bacteria. Length = 370

>gnl|CDD|183499 PRK12396, PRK12396, 5-methylribose kinase; Reviewed

 Score = 87.6 bits (217), Expect = 5e-21
 Identities = 45/121 (37%), Positives = 65/121 (53%), Gaps = 4/121 (3%)

Query: 35  LTIKEVGDGNLNFVYIV--VGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHG 92
           L  KE+GDGNLN+V+ V     + S ++KQA    R I + + ++  R   E+  L+   
Sbjct: 32  LQCKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTAR-ISDEFKLSTNRIRIESDVLQLEE 90

Query: 93  KLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT 152
           +L P  VP+VY FD  M+   M  L   H ILR  LI    +P LA+ ++ F+  TL  T
Sbjct: 91  ELAPGLVPKVYLFDSVMNCCVMEDLSD-HTILRTALINHEIFPRLADDLTTFLVNTLLLT 149

Query: 153 S 153
           S
Sbjct: 150 S 150

Length = 409

>gnl|CDD|216618 pfam01636, APH, Phosphotransferase enzyme family

 Score = 37.9 bits (88), Expect = 0.001
 Identities = 18/82 (21%), Positives = 27/82 (32%), Gaps = 10/82 (12%)

Query: 36  TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLC 95
           T++ +  G  N  Y+V    G +V+K A P              R       L   G   
Sbjct: 1   TLRPLSGGASNRTYLVGTGDGRYVLKLAPP------AEAAEELRRELALLRHLAAAGI-- 52

Query: 96  PDHVPEVYHFDRTMSLIGMRYL 117
              VP V         +G+ +L
Sbjct: 53  --PVPRVLAGGTDGGGLGLPFL 72

This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881. Length = 238

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	165
PRK12396	409	5-methylribose kinase; Reviewed	100.0
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	100.0
PRK09550	401	mtnK methylthioribose kinase; Reviewed	100.0
PLN02756	418	S-methyl-5-thioribose kinase	100.0
COG4857	408	Predicted kinase [General function prediction only	100.0
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.31
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.14
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.11
KOG3087	229	consensus Serine/threonine protein kinase [General	98.95
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.92
PF01636	239	APH: Phosphotransferase enzyme family This family	98.82
PRK05231	319	homoserine kinase; Provisional	98.74
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.74
PRK14879	211	serine/threonine protein kinase; Provisional	98.73
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	98.72
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	98.7
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.67
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	98.66
PLN02876	822	acyl-CoA dehydrogenase	98.64
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	98.61
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	98.6
PRK10593	297	hypothetical protein; Provisional	98.6
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	98.53
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	98.44
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.43
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	98.35
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	98.3
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	98.2
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.16
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.12
PLN02236	344	choline kinase	98.05
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.05
COG2334	331	Putative homoserine kinase type II (protein kinase	98.0
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	97.93
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	97.93
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	97.91
PRK09902	216	hypothetical protein; Provisional	97.86
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	97.8
PRK11768	325	serine/threonine protein kinase; Provisional	97.73
PF02958	294	EcKinase: Ecdysteroid kinase; InterPro: IPR004119	97.71
PRK06148	1013	hypothetical protein; Provisional	97.63
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	97.58
smart00090	237	RIO RIO-like kinase.	97.56
PTZ00384	383	choline kinase; Provisional	97.52
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	97.49
PF04655	253	APH_6_hur: Aminoglycoside/hydroxyurea antibiotic r	97.48
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	97.45
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	97.42
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	97.34
PTZ00296	442	choline kinase; Provisional	97.3
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	97.24
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	97.14
PRK06149	972	hypothetical protein; Provisional	97.12
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	97.07
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	97.06
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	96.95
PRK12274	218	serine/threonine protein kinase; Provisional	96.9
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	96.88
PRK09188	365	serine/threonine protein kinase; Provisional	96.88
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	96.87
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	96.87
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	96.85
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	96.82
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	96.81
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	96.77
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	96.77
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	96.76
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	96.72
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	96.68
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	96.67
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	96.66
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	96.64
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	96.62
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	96.62
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	96.61
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	96.61
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	96.6
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	96.59
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	96.57
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	96.56
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	96.54
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	96.51
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	96.5
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	96.5
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	96.47
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	96.47
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	96.45
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	96.45
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	96.44
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	96.44
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	96.44
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	96.43
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	96.41
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	96.39
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	96.38
PHA02988	283	hypothetical protein; Provisional	96.37
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	96.37
PTZ00263	329	protein kinase A catalytic subunit; Provisional	96.36
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	96.36
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	96.35
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	96.32
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	96.32
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	96.29
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	96.28
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	96.28
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	96.28
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	96.26
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	96.26
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	96.26
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	96.25
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	96.25
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	96.23
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	96.22
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	96.21
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	96.21
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	96.2
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	96.19
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	96.17
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	96.16
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	96.16
PF07914	414	DUF1679: Protein of unknown function (DUF1679); In	96.15
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	96.13
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	96.13
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	96.13
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	96.12
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	96.12
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	96.11
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	96.07
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	96.04
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	96.03
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	96.03
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	96.03
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	96.02
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	96.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	96.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	96.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	95.99
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	95.98
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	95.97
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	95.97
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	95.97
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	95.94
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	95.94
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	95.94
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	95.93
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	95.92
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	95.92
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	95.91
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	95.9
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	95.89
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	95.86
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	95.86
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	95.85
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	95.83
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	95.83
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	95.83
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	95.83
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	95.83
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	95.82
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	95.82
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	95.78
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	95.78
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	95.77
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	95.77
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	95.77
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	95.75
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	95.75
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	95.72
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	95.72
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	95.71
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	95.71
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	95.7
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	95.69
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	95.69
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	95.67
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	95.66
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	95.65
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	95.64
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	95.63
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	95.63
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	95.62
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	95.61
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	95.61
PLN00009	294	cyclin-dependent kinase A; Provisional	95.6
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	95.6
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	95.58
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	95.58
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	95.58
COG0478	304	RIO-like serine/threonine protein kinase fused to	95.55
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	95.53
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	95.53
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	95.51
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	95.5
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	95.46
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	95.45
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	95.43
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	95.42
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	95.41
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	95.4
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	95.4
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	95.4
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	95.4
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	95.4
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	95.39
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	95.38
PHA03212	391	serine/threonine kinase US3; Provisional	95.37
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	95.37
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	95.37
PLN00034	353	mitogen-activated protein kinase kinase; Provision	95.36
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	95.35
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	95.35
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	95.35
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	95.34
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	95.32
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	95.32
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	95.3
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	95.3
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	95.3
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	95.29
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	95.27
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	95.27
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	95.26
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	95.25
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	95.23
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	95.23
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	95.19
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	95.18
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	95.17
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	95.17
KOG3021	313	consensus Predicted kinase [General function predi	95.15
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	95.15
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	95.13
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	95.12
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	95.12
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	95.11
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	95.09
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	95.05
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	95.04
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	95.01
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	95.01
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	95.01
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	95.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	95.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	94.99
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	94.99
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	94.99
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	94.99
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	94.98
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	94.97
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	94.95
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	94.95
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	94.92
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	94.92
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	94.87
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	94.86
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	94.86
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	94.85
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	94.83
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	94.8
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	94.79
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	94.79
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	94.76
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	94.75
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	94.7
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	94.69
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	94.68
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	94.68
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	94.66
KOG0610	459	consensus Putative serine/threonine protein kinase	94.65
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	94.63
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	94.63
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	94.63
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	94.62
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	94.6
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	94.6
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	94.59
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	94.53
KOG0605	550	consensus NDR and related serine/threonine kinases	94.51
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	94.51
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	94.48
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	94.48
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	94.47
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	94.45
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	94.42
KOG1187	361	consensus Serine/threonine protein kinase [Signal	94.41
PHA03211	461	serine/threonine kinase US3; Provisional	94.39
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	94.31
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	94.3
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	94.28
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	94.27
PTZ00284	467	protein kinase; Provisional	94.23
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	94.22
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	94.2
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	94.19
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	94.19
PHA03209	357	serine/threonine kinase US3; Provisional	94.16
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	94.15
PTZ00024	335	cyclin-dependent protein kinase; Provisional	94.11
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	94.08
PRK10345	210	hypothetical protein; Provisional	94.08
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	94.06
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	94.04
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	94.03
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	94.01
PTZ00266	1021	NIMA-related protein kinase; Provisional	94.01
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	93.99
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	93.96
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	93.93
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	93.86
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	93.81
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	93.79
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	93.77
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	93.72
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	93.65
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	93.64
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	93.64
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	93.58
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	93.58
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	93.57
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	93.54
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	93.53
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	93.53
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	93.51
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	93.5
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	93.5
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	93.5
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	93.47
KOG0192	362	consensus Tyrosine kinase specific for activated (	93.39
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	93.32
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	93.21
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	93.16
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	93.13
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	93.07
KOG1235	538	consensus Predicted unusual protein kinase [Genera	93.06
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	93.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	92.91
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	92.87
KOG0595	429	consensus Serine/threonine-protein kinase involved	92.78
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	92.76
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	92.75
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	92.7
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	92.65
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	92.65
PTZ00267	478	NIMA-related protein kinase; Provisional	92.6
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	92.58
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	92.51
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	92.4
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	92.38
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	92.32
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	92.3
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	92.23
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	92.2
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	92.18
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	92.15
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	92.05
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	91.97
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	91.96
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	91.95
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	91.79
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	91.75
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	91.72
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	91.71
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	91.66
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	91.41
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	91.27
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	91.19
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	91.04
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	90.96
cd05124	238	AFK Actin-Fragmin Kinase (AFK); catalytic domain.	90.82
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	90.71
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	90.67
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	90.63
PHA03207	392	serine/threonine kinase US3; Provisional	90.63
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	90.58
PTZ00036	440	glycogen synthase kinase; Provisional	90.53
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	90.01
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	89.98
KOG0583	370	consensus Serine/threonine protein kinase [Signal	89.85
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	89.61
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	89.24
PTZ00283	496	serine/threonine protein kinase; Provisional	88.69
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	88.55
KOG2686	366	consensus Choline kinase [Cell wall/membrane/envel	87.54
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	87.18
COG0661	517	AarF Predicted unusual protein kinase [General fun	86.83
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	86.35
KOG4720	391	consensus Ethanolamine kinase [Lipid transport and	85.79
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	85.65
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	85.22
KOG0198	313	consensus MEKK and related serine/threonine protei	85.06
KOG0661	538	consensus MAPK related serine/threonine protein ki	84.68
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	84.6
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	83.89
PLN03224	507	probable serine/threonine protein kinase; Provisio	83.78
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	82.59

>PRK12396 5-methylribose kinase; Reviewed

Probab=100.00  E-value=3.1e-48  Score=336.44  Aligned_cols=156  Identities=32%  Similarity=0.503  Sum_probs=146.8

Q ss_pred             CCCccccCHhhHHHHHHhC-CCcccccCCCCCcceeEeccCCceeEEEEEEeC--CCeEEEEecCccccccCCCCCCChH
Q 045250            3 FTEFRPLDDKSLLEYIKAT-PSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGT--SGSFVIKQALPYVRCIGESWPMTKE   79 (165)
Q Consensus         3 ~~~~~~l~~~~v~~Yl~~~-~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~--~gsvIvKqa~p~~r~~~~~~~l~~~   79 (165)
                      |.+|++|+++++++|+++. +.++     ..++++++++||||+|+||||++.  .++||||||+||+|+ +++||+|++
T Consensus         4 ~~~y~~l~~~~v~~yl~~~l~~~~-----~~~~~~~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv-~~swpL~~~   77 (409)
T PRK12396          4 FTKYFLMEANDVIVYVKEKLSKFE-----HAKGLQCKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARI-SDEFKLSTN   77 (409)
T ss_pred             cccceeCCHhHHHHHHHHhcCCCC-----CcccceeeEcCCCceEEEEEEeeCCCCceEEEEeccHhhcc-CCCCCCChH
Confidence            5699999999999999985 6553     567899999999999999999986  349999999999995 799999999


Q ss_pred             HHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccCc
Q 045250           80 RAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTT  159 (165)
Q Consensus        80 R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~~  159 (165)
                      |+++|+++|+.+++++|++||+||+||++++++|||||+ ++.+||++|++|+.+|.+|++||+|||++|++||||+|++
T Consensus        78 R~~~E~~aL~~~~~~~P~~VP~vy~~D~e~~~~vMEdL~-~~~ilR~~Li~G~~~p~~A~~ig~fla~tlf~tSd~~l~~  156 (409)
T PRK12396         78 RIRIESDVLQLEEELAPGLVPKVYLFDSVMNCCVMEDLS-DHTILRTALINHEIFPRLADDLTTFLVNTLLLTSDVVMNH  156 (409)
T ss_pred             HHHHHHHHHHHHHhhCCCcCCeEEEECcHHhhHHHHhCc-ccHHHHHHHHcCCcChhHHHHHHHHHHHHHhhcchhccCh
Confidence            999999999999999999999999999999999999999 6999999999999999999999999999999999999999


Q ss_pred             hhhhcC
Q 045250          160 TEHKRN  165 (165)
Q Consensus       160 ~~kk~~  165 (165)
                      ++||+.
T Consensus       157 ~~kk~~  162 (409)
T PRK12396        157 KEKKEL  162 (409)
T ss_pred             HHHHHh
Confidence            999973

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=100.00  E-value=1.6e-41  Score=291.61  Aligned_cols=126  Identities=50%  Similarity=0.824  Sum_probs=121.3

Q ss_pred             EeccCCceeEEEEEEeCCC--eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEe
Q 045250           38 KEVGDGNLNFVYIVVGTSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMR  115 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~~g--svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vME  115 (165)
                      +|+||||+|+||||++++|  |||||||+||+|++|++||++.+|+++|+++|+.+++++|..||++|+||++++++|||
T Consensus         1 ~EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D~e~~~~vME   80 (370)
T TIGR01767         1 QEVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHFDTEMAVTVME   80 (370)
T ss_pred             CcCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEEccccceehHh
Confidence            4789999999999998864  89999999999988889999999999999999999999999999999999999999999


Q ss_pred             cCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccCchhhhc
Q 045250          116 YLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKR  164 (165)
Q Consensus       116 dl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~~~~kk~  164 (165)
                      ||+ ++.+||++|++|+.+|.+|++||+|||+|||+||||+|++++||+
T Consensus        81 dL~-~~~ilR~~Li~g~~~p~~A~~iG~~La~tlf~tsd~~~~~~~kk~  128 (370)
T TIGR01767        81 DLS-HHKIARKGLIEGENYPHLARHIGEFLAKTLFYSSDYALEPKVKKA  128 (370)
T ss_pred             hCc-cchHHHHHHHcCCCChHHHHHHHHHHHHHHHhhcccccCHHHHHH
Confidence            999 699999999999999999999999999999999999999999886

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=100.00  E-value=5.3e-40  Score=285.82  Aligned_cols=156  Identities=49%  Similarity=0.783  Sum_probs=146.4

Q ss_pred             CCCccccCHhhHHHHHH-hCCCcccccCCCCCcceeEeccCCceeEEEEEEeCCC--eEEEEecCccccccCCCCCCChH
Q 045250            3 FTEFRPLDDKSLLEYIK-ATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSG--SFVIKQALPYVRCIGESWPMTKE   79 (165)
Q Consensus         3 ~~~~~~l~~~~v~~Yl~-~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~g--svIvKqa~p~~r~~~~~~~l~~~   79 (165)
                      +++|++|++++|++||+ ..|.+.     +.+.++++++||||+|+||||++.+|  ++|||||+||+|+++++|+++.+
T Consensus         1 ~~~y~~l~~~~v~~yl~~~~~~~~-----~~~~~~~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~e   75 (401)
T PRK09550          1 MSGYETLTEEDAVEYAALKLGLFD-----PKALLTAREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLD   75 (401)
T ss_pred             CCCCeeCCHhHHHHHHHHhcCCCC-----CcccceeeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHH
Confidence            57999999999999995 446553     56778999999999999999999877  89999999999988888999999


Q ss_pred             HHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccCc
Q 045250           80 RAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTT  159 (165)
Q Consensus        80 R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~~  159 (165)
                      |+.+|+++|+.+++.+|..||++|+||++++++|||||+ ++.+||++|++|+.+|.+|++||++||++||+||||++++
T Consensus        76 R~~~Eae~L~~l~~~~p~~VPkV~~~D~~~~~lVME~L~-~~~~lr~~Ll~g~~~p~~a~~iG~~LA~~~f~tsd~~~~~  154 (401)
T PRK09550         76 RARIEAEALKIQAKYVPDLVPKVYHYDEELAVTVMEDLS-DHKILRKGLIDGKKYPKLAEHIGEFLARTLFYTSDFGLSS  154 (401)
T ss_pred             HHHHHHHHHHHHHhhCCCCCCeEEEECCCCCEEEEecCC-CccHHHHHHhcCCccHHHHHHHHHHHHHHHhccchhhcCh
Confidence            999999999999999999999999999999999999999 6999999999999999999999999999999999999999


Q ss_pred             hhhhc
Q 045250          160 TEHKR  164 (165)
Q Consensus       160 ~~kk~  164 (165)
                      ++||+
T Consensus       155 ~~~~~  159 (401)
T PRK09550        155 EEKKA  159 (401)
T ss_pred             hhhhh
Confidence            98874

>PLN02756 S-methyl-5-thioribose kinase

Probab=100.00  E-value=1.3e-39  Score=283.76  Aligned_cols=164  Identities=88%  Similarity=1.438  Sum_probs=153.6

Q ss_pred             CCCCCccccCHhhHHHHHHhCCCcccccCCCCCcceeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHH
Q 045250            1 MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKER   80 (165)
Q Consensus         1 ~~~~~~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R   80 (165)
                      |.|.+|+.|+.+.+.+|+++++.+...++...+.++++++||||+|+||||++.++++||||++|++|+++++||++.+|
T Consensus         1 ~~~~~y~~l~~~~l~~yl~~~~~~~~~l~g~~~~l~~~eiggGn~N~VyrV~~~~~svVVKqa~p~~r~vga~wpl~~~R   80 (418)
T PLN02756          1 MAFSEFRPLDEKSLVEYIKATPALSSKIGNDLDDLKIKEVGDGNLNFVYIVVSSSGSFVIKQALPYIRCIGESWPMTKER   80 (418)
T ss_pred             CCccccccCCHHHHHHHHHHccchhhhcCCCCCCceEEEcCCCceeeEEEEEcCCccEEEEeCCccccCCCccccCCccH
Confidence            78999999999999999999877665555445678999999999999999998766999999999999888999999999


Q ss_pred             HHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccCch
Q 045250           81 AYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTT  160 (165)
Q Consensus        81 ~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~~~  160 (165)
                      +.+|+++|+..++++|..||++|+||+++++++||||++++.+||+.|++|..+|.++++||++||+++|+||||+++++
T Consensus        81 ~~~Ea~aL~~~~~~~p~~VPkVy~~ded~~vlvME~L~~~~~ilr~~Ll~G~~~p~~a~~ig~~la~tLf~tSd~~~~~~  160 (418)
T PLN02756         81 AYFEATALREHGRLCPDHVPEVYHFDRTMALIGMRYLEPPHIILRKGLIAGIEYPLLAEHMSDYMAKTLFFTSLLYHDTT  160 (418)
T ss_pred             HHHHHHHHHHhhhcCCCCCCeEEEECCCCCEEEEeecCCcceehhhhhccCCCCHHHHHHHHHHHHHHHhhcchhccChh
Confidence            99999999999999999999999999999999999998458999999999999999999999999999999999999999


Q ss_pred             hhhc
Q 045250          161 EHKR  164 (165)
Q Consensus       161 ~kk~  164 (165)
                      +||+
T Consensus       161 ~kk~  164 (418)
T PLN02756        161 EHKR  164 (418)
T ss_pred             hhhH
Confidence            9986

>COG4857 Predicted kinase [General function prediction only]

Probab=100.00  E-value=1.7e-40  Score=276.40  Aligned_cols=159  Identities=43%  Similarity=0.740  Sum_probs=141.1

Q ss_pred             CCccccCHhhHHHH-HHhCCCcccccCCCCCcceeEeccCCceeEEEEEEeCCC--eEEEEecCccccccCCCCCCChHH
Q 045250            4 TEFRPLDDKSLLEY-IKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSG--SFVIKQALPYVRCIGESWPMTKER   80 (165)
Q Consensus         4 ~~~~~l~~~~v~~Y-l~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~g--svIvKqa~p~~r~~~~~~~l~~~R   80 (165)
                      ++.+.+...+.+.| .+.  .+..++|+....|+|+++||||+||||.|.+..|  +.|||||+||+|++|.+||+|..|
T Consensus         3 ~~~f~~~~~Etl~~~~~~--al~~k~G~~~s~ltvkEIGDGNlNyvF~V~~~~~~ka~ivKQA~py~r~vGeswPL~l~R   80 (408)
T COG4857           3 KEVFEALSDETLSYGVNV--ALNLKIGPNKSHLTVKEIGDGNLNYVFIVEGKIGGKAAIVKQALPYVRLVGESWPLPLKR   80 (408)
T ss_pred             ccchhhhhHhHhhhhhHH--HHHHHhCCCccceEEEEecCCceeEEEEEecCCCCeehhhhhhhhHHHhcCCcCCCcchH
Confidence            34444445555566 221  2223557667899999999999999999999854  999999999999999999999999


Q ss_pred             HHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccCch
Q 045250           81 AYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTT  160 (165)
Q Consensus        81 ~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~~~  160 (165)
                      .++|+.+|.+.++.+|..||++|+||+.++++|||||++ ++++|.+|++|+.+|+++.+||.|||+++|++||+.|.++
T Consensus        81 s~iE~~aL~rq~~~aPh~VPeIyf~De~mavivMEdls~-~kilR~~LI~Gr~~P~~~~~igeFlarTLf~~sDl~m~~k  159 (408)
T COG4857          81 SFIEYHALRRQNARAPHFVPEIYFFDEIMAVIVMEDLSP-HKILRRALIDGRILPNIVDDIGEFLARTLFRGSDLSMNTK  159 (408)
T ss_pred             HHHHHHHHHHhhccCCCCcceeEeecchhhhhhHhhhhH-HHHHHHHHhccccCccHHHHHHHHHHHHHHhccccccchH
Confidence            999999999999999999999999999999999999995 9999999999999999999999999999999999999999


Q ss_pred             hhhcC
Q 045250          161 EHKRN  165 (165)
Q Consensus       161 ~kk~~  165 (165)
                      +||++
T Consensus       160 ~kK~~  164 (408)
T COG4857         160 DKKAD  164 (408)
T ss_pred             hHHHH
Confidence            99974

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.31  E-value=1.2e-11  Score=98.34  Aligned_cols=101  Identities=25%  Similarity=0.262  Sum_probs=88.1

Q ss_pred             eEEEEEEeCCCeEEEEecCccc-cccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHH
Q 045250           46 NFVYIVVGTSGSFVIKQALPYV-RCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPPHIIL  124 (165)
Q Consensus        46 N~v~rV~~~~gsvIvKqa~p~~-r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vMEdl~~~~~~l  124 (165)
                      +-++++..-+..+|+|...|+. |...-|-.+..+|++.|+++|..+... ...||.+|++|+.+..++||+++  +..+
T Consensus        10 a~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~-GV~~P~v~dvD~~~~~I~me~I~--G~~l   86 (204)
T COG3642          10 AIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREA-GVPVPIVYDVDPDNGLIVMEYIE--GELL   86 (204)
T ss_pred             eeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHc-CCCCCeEEEEcCCCCEEEEEEeC--ChhH
Confidence            3456665444489999999998 665457789999999999999999887 88999999999999999999998  6899


Q ss_pred             HHHHHcCCCCHHHHHHHHHHHHHHHhc
Q 045250          125 RKGLIAGIKYPLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       125 r~~l~~g~~~~~~a~~iG~~La~~h~~  151 (165)
                      |+.+..+  .+.+++.+|..+|++|..
T Consensus        87 kd~l~~~--~~~~~r~vG~~vg~lH~~  111 (204)
T COG3642          87 KDALEEA--RPDLLREVGRLVGKLHKA  111 (204)
T ss_pred             HHHHHhc--chHHHHHHHHHHHHHHhc
Confidence            9999987  589999999999999975

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.14  E-value=4.4e-10  Score=84.73  Aligned_cols=102  Identities=18%  Similarity=0.143  Sum_probs=79.3

Q ss_pred             eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEe
Q 045250           36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMR  115 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vME  115 (165)
                      .++++++|..|.|||++..+++++||+..+...       ... ....|+++|+.+.+.  ..+|+++.+|.+...+|||
T Consensus         2 ~~~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~-------~~~-~~~~E~~~l~~l~~~--~~~P~~~~~~~~~~~lv~e   71 (170)
T cd05151           2 HISPLKGGMTNKNYRVEVANKKYVVRIPGNGTE-------LLI-NRENEAENSKLAAEA--GIGPKLYYFDPETGVLITE   71 (170)
T ss_pred             ceeecCCcccCceEEEEECCeEEEEEeCCCCcc-------ccc-CHHHHHHHHHHHHHh--CCCCceEEEeCCCCeEEEE
Confidence            478999999999999998866999999864321       112 237899999998774  4589999999989999999


Q ss_pred             cCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250          116 YLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       116 dl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      ++++  ..+...   ....+...+++|+.|+++|..+
T Consensus        72 ~i~G--~~l~~~---~~~~~~~~~~l~~~l~~LH~~~  103 (170)
T cd05151          72 FIEG--SELLTE---DFSDPENLEKIAKLLKKLHSSP  103 (170)
T ss_pred             ecCC--Cccccc---cccCHHHHHHHHHHHHHHhCCC
Confidence            9983  333322   1234678899999999999876

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.11  E-value=5.9e-10  Score=86.87  Aligned_cols=111  Identities=17%  Similarity=0.220  Sum_probs=84.4

Q ss_pred             ceeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC-----
Q 045250           35 LTIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRT-----  108 (165)
Q Consensus        35 ~~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e-----  108 (165)
                      +.++++++|..|.+|||...+| ++|||...+--.      .-...+...|+++++.+... ...+|+++.++++     
T Consensus         1 ~~~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~------~~~~~~~~~E~~~~~~l~~~-~~~vp~~~~~~~~~~~~~   73 (223)
T cd05154           1 LEVRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGAL------LPSAHDVAREYRVLRALAGT-GVPVPKVLALCEDPSVLG   73 (223)
T ss_pred             CcceecCCCccceEEEEEecCCcceEEEeCCCccc------CcccccHHHHHHHHHHhhCC-CCCCCCEEEECCCCCccC
Confidence            3578999999999999998875 999999753221      12345789999999999884 5569999999987     


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcccc
Q 045250          109 MSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYTSL  154 (165)
Q Consensus       109 ~~~~vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~tsd  154 (165)
                      ...++||+++  +..+...+..+...    ..++.++|+.|+++|..+..
T Consensus        74 ~~~~v~e~i~--G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~  121 (223)
T cd05154          74 TPFYVMERVD--GRVLRDRLLRPELSPEERRALARALADTLAALHSVDPA  121 (223)
T ss_pred             CceEEEEEeC--CEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChh
Confidence            4589999998  34555544322222    36799999999999988753

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.95  E-value=4.6e-09  Score=84.02  Aligned_cols=122  Identities=17%  Similarity=0.139  Sum_probs=96.9

Q ss_pred             eeEeccCCceeEEEEEEeCCCeEEEEecCccc-cccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYV-RCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGM  114 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~-r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vM  114 (165)
                      ++..+.-|-=-.|++.......-|||...|+- |...-+-.++..|+..|++.|.....+ .-.+|++|+.|..++.+.|
T Consensus        11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~-GI~~P~l~~~D~~~~~i~M   89 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRAL-GIPAPRLIFIDTYGGQIYM   89 (229)
T ss_pred             cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHh-CCCCceEEEEecCCCeEEE
Confidence            44455555555888888775577889998886 654446789999999999999999887 8899999999999999999


Q ss_pred             ecCCCCchHHHHHHHcCC----CC---HHHHHHHHHHHHHHHhc--------ccccccCc
Q 045250          115 RYLEPPHIILRKGLIAGI----KY---PLLAEHMSEFMAKTLFY--------TSLLYRTT  159 (165)
Q Consensus       115 Edl~~~~~~lr~~l~~g~----~~---~~~a~~iG~~La~~h~~--------tsd~~l~~  159 (165)
                      |+++ +...+|+.+..--    .+   ..++..||+.+|++|.-        ||++-|.+
T Consensus        90 E~~~-g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~  148 (229)
T KOG3087|consen   90 EFID-GASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRS  148 (229)
T ss_pred             Eecc-chhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEec
Confidence            9998 6788888887632    22   36899999999999963        56665544

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.92  E-value=8.6e-09  Score=80.05  Aligned_cols=108  Identities=23%  Similarity=0.211  Sum_probs=85.8

Q ss_pred             ccCCceeEEEEEEeCCCeEEEEecCccc-cccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCC
Q 045250           40 VGDGNLNFVYIVVGTSGSFVIKQALPYV-RCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLE  118 (165)
Q Consensus        40 l~~Gn~N~v~rV~~~~gsvIvKqa~p~~-r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vMEdl~  118 (165)
                      ||.|+...||++....+.+++|+..+.. +....++.+..+|...|.++|+.+... ...+|.++.++.+...++||+++
T Consensus         2 ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~~p~~~~~~~~~~~lv~e~~~   80 (199)
T TIGR03724         2 IAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKA-GVNTPVVYDVDPDNKTIVMEYIE   80 (199)
T ss_pred             CCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHC-CCCCCEEEEEECCCCEEEEEEEC
Confidence            6889999999999654499999987654 221124667778999999999988763 45789999999999999999998


Q ss_pred             CCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250          119 PPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       119 ~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                        +..|.+.+..+..  .++.+++..|+.+|...
T Consensus        81 --g~~l~~~~~~~~~--~~~~~i~~~l~~lH~~g  110 (199)
T TIGR03724        81 --GKPLKDVIEEGND--ELLREIGRLVGKLHKAG  110 (199)
T ss_pred             --CccHHHHHhhcHH--HHHHHHHHHHHHHHHCC
Confidence              4678777655432  78999999999999865

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.82  E-value=1.2e-08  Score=79.56  Aligned_cols=104  Identities=25%  Similarity=0.293  Sum_probs=77.5

Q ss_pred             eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC---C--Cc
Q 045250           36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR---T--MS  110 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~---e--~~  110 (165)
                      .|+++++|..|.+|+|+..+|++|+|...+. .        ...+...|.++++.+.+.-. .||+++.++.   .  ..
T Consensus         1 ~i~~l~~G~~n~~~~v~~~~~~~vlK~~~~~-~--------~~~~~~~e~~~~~~l~~~~~-pvP~~~~~~~~~~~~~~~   70 (239)
T PF01636_consen    1 HIRPLSGGFSNRVYRVTTDDGRYVLKFYRPP-D--------AAERLRREAAVLRQLAEHGI-PVPRVLAFDTSDEFNGFP   70 (239)
T ss_dssp             -EEEEEESSSSEEEEEEETTSEEEEEEESSH-H--------HHHHHHHHHHHHHHHHHTTS-BS--EEEEEEETEETSEE
T ss_pred             CCccCCCCCeeeEEEEEECCcEEEEEEeCCC-C--------CHHHHHHHHHHHHHHHhcCC-CCceEEeecccccccccc
Confidence            4789999999999999999889999997765 2        22688899999999988633 7999998432   2  23


Q ss_pred             eEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250          111 LIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      ..+|++++  +..+.. .+.....+.++.++|++|+++|..+
T Consensus        71 ~~~~~~i~--g~~~~~-~~~~~~~~~~~~~~~~~l~~lh~~~  109 (239)
T PF01636_consen   71 YLLMEYIP--GRPLDD-ELSPEQRPELLRQLGRALAQLHQVP  109 (239)
T ss_dssp             EEEEEEES--SEEHHH-TSTHHHHHHHHHHHHHHHHHHHHSH
T ss_pred             eEEEEEec--cccccc-cccccccccccccchhhhhhccccc
Confidence            68999998  345544 1112234678999999999999985

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PRK05231 homoserine kinase; Provisional

Probab=98.74  E-value=1.4e-07  Score=78.91  Aligned_cols=128  Identities=15%  Similarity=0.120  Sum_probs=92.9

Q ss_pred             CCccccCHhhHHHHHHhCCCcccccCCCCCcceeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHH
Q 045250            4 TEFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYF   83 (165)
Q Consensus         4 ~~~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~   83 (165)
                      +-|..|+.+++.+.|..-+.        .+..+++++++|..|.+|+|++.+|++|||...   +       .+.+....
T Consensus         2 ~vyt~ls~~~l~~~l~~y~~--------~~~~~~~~l~~G~~n~~y~v~t~~g~~vLK~~~---~-------~~~~~l~~   63 (319)
T PRK05231          2 AVYTDVSDDELAAFLAPYDL--------GELLSLKGIAEGIENSNFFLTTTQGEYVLTLFE---R-------LTAEDLPF   63 (319)
T ss_pred             CccccCCHHHHHHHHHhcCC--------chhhccchhccccccceEEEEeCCCcEEEEEec---c-------CChHHhHH
Confidence            45899999999999965431        134578999999999999999888899999643   1       23355667


Q ss_pred             HHHHHHHhhccCCCCCceEEEE--------cCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccccc
Q 045250           84 EALALKEHGKLCPDHVPEVYHF--------DRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLL  155 (165)
Q Consensus        84 E~~~L~~~~~~~p~~vP~v~~~--------D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~  155 (165)
                      |.++|+.+.+. .-.||+++..        ......++||++++ . .+      ....+..++++|+.||++|..+.+|
T Consensus        64 ~~~~l~~L~~~-glpvP~~i~~~~G~~~~~~~g~~~~l~~~l~G-~-~~------~~~~~~~~~~~G~~LA~lH~~~~~f  134 (319)
T PRK05231         64 FLGLMQHLAAR-GVPVPAPVARRDGAALGELAGKPAAIVTFLEG-K-WP------RAPTAAHCAEVGEMLARMHLAGRDF  134 (319)
T ss_pred             HHHHHHHHHHC-CCCCCcceeCCCCCEeeeeCCEEEEEEEecCC-C-CC------CCCCHHHHHHHHHHHHHHHhhhhcC
Confidence            88888888653 3336776642        23446789999983 2 21      1134567899999999999999887


Q ss_pred             ccC
Q 045250          156 YRT  158 (165)
Q Consensus       156 ~l~  158 (165)
                      ...
T Consensus       135 ~~~  137 (319)
T PRK05231        135 PLE  137 (319)
T ss_pred             Ccc
Confidence            654

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.74  E-value=1.1e-07  Score=76.57  Aligned_cols=102  Identities=16%  Similarity=0.073  Sum_probs=76.7

Q ss_pred             eEeccCCce-eEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC--CceEE
Q 045250           37 IKEVGDGNL-NFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRT--MSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~-N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e--~~~~v  113 (165)
                      .++|..|.. |.||+++..+++++||...+.-          ..+...|+++|+.+++.  ..+|+++++++.  ...+|
T Consensus         3 ~~~~~~g~~~~~v~~~~~~~~~~~vk~~~~~~----------~~~~~~E~~~l~~l~~~--~~vP~v~~~~~~~~~~~lv   70 (244)
T cd05150           3 WERVTEGQSGATVYRLDGKNPGLYLKIAPSGP----------TYELEREAERLRWLAGK--LPVPEVIDYGSDDGRAWLL   70 (244)
T ss_pred             ceecCCCCCcCeEEEEcCCCCcEEEEecCCCc----------ccchHHHHHHHHHHHhc--CCCCeEEEEEecCCccEEE
Confidence            456666655 9999999876699999987442          23556799999999886  569999999876  47899


Q ss_pred             EecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccc
Q 045250          114 MRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTS  153 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ts  153 (165)
                      ||+++  +..+.+... ....+.++.++|++|+++|....
T Consensus        71 ~e~i~--G~~l~~~~~-~~~~~~~~~~l~~~l~~lH~i~~  107 (244)
T cd05150          71 TSAVP--GVPAAALWE-ELEPERLVDALAEALRRLHALPV  107 (244)
T ss_pred             EEeeC--CccHhHhhc-ccCHHHHHHHHHHHHHHHhcCCc
Confidence            99998  345544332 11235789999999999998753

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.73  E-value=8.9e-08  Score=74.83  Aligned_cols=112  Identities=21%  Similarity=0.126  Sum_probs=84.2

Q ss_pred             EeccCCceeEEEEEEeCCCeEEEEecCcccccc-CCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEec
Q 045250           38 KEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCI-GESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRY  116 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~-~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vMEd  116 (165)
                      +.+|.|....||++...++.++||+..+..... ..+.....+|...|++.|+.+... ...+|.+++++.+...++|||
T Consensus         2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~~p~~~~~~~~~~~lv~e~   80 (211)
T PRK14879          2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKA-GVNVPAVYFVDPENFIIVMEY   80 (211)
T ss_pred             cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCeEEEEeCCCCEEEEEE
Confidence            568899999999998755599999987654211 112334456888899999887652 456899999999999999999


Q ss_pred             CCCCchHHHHHHHcCCC-CHHHHHHHHHHHHHHHhcc
Q 045250          117 LEPPHIILRKGLIAGIK-YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       117 l~~~~~~lr~~l~~g~~-~~~~a~~iG~~La~~h~~t  152 (165)
                      ++  +..|.+.+..... ...++.+++.+|+.+|...
T Consensus        81 ~~--G~~L~~~~~~~~~~~~~i~~~i~~~l~~lH~~~  115 (211)
T PRK14879         81 IE--GEPLKDLINSNGMEELELSREIGRLVGKLHSAG  115 (211)
T ss_pred             eC--CcCHHHHHHhccHHHHHHHHHHHHHHHHHHhCC
Confidence            97  4577776654322 2478999999999999764

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=98.72  E-value=1.7e-07  Score=74.84  Aligned_cols=105  Identities=14%  Similarity=0.066  Sum_probs=76.5

Q ss_pred             ceeEeccCCceeEEEEEEeCC--C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCce
Q 045250           35 LTIKEVGDGNLNFVYIVVGTS--G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSL  111 (165)
Q Consensus        35 ~~v~~l~~Gn~N~v~rV~~~~--g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~  111 (165)
                      +.+++++||..|.+|||+..+  + ++|+|.-.+..     ...+  +| ..|..+++.++..  +.+|+++++..  ..
T Consensus         1 ~~i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~-----~~~~--d~-~~E~~~~~~l~~~--gl~P~v~~~~~--~~   68 (235)
T cd05157           1 ITFKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKT-----ELII--DR-ERELRIHKLLSKH--GLAPKLYATFQ--NG   68 (235)
T ss_pred             CeEEEcCCcccceEEEEEcCCCCCCeEEEEEccCCc-----ccee--cH-HHHHHHHHHHHhC--CCCCeEEEEeC--Cc
Confidence            368999999999999999874  4 89999655321     1223  33 2599999998874  35899987764  35


Q ss_pred             EEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLY  156 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~  156 (165)
                      ++||+++ + ..+...-+   ..+....++|..||++|..+....
T Consensus        69 ~l~e~i~-G-~~l~~~~~---~~~~~~~~la~~l~~lH~~~~~~~  108 (235)
T cd05157          69 LIYEFIP-G-RTLEPEDL---RNPKIYRLIARELAKLHSIKPPEA  108 (235)
T ss_pred             EEEEeeC-C-CcCCHHHc---cChHHHHHHHHHHHHHhccccccc
Confidence            8999998 3 44433211   236788999999999999987764

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=98.70  E-value=2.7e-07  Score=77.09  Aligned_cols=128  Identities=11%  Similarity=0.119  Sum_probs=92.2

Q ss_pred             CccccCHhhHHHHHHhCCCcccccCCCCCcceeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHH
Q 045250            5 EFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFE   84 (165)
Q Consensus         5 ~~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E   84 (165)
                      -|..++.+.+.+.|...+.        .+..+++++++|..|.+|+|++++|+.|+|...+.         -+.++...|
T Consensus         3 ~~~~~~~~~l~~~l~~y~~--------~~~~~i~~~~~G~~n~~y~v~t~~~~~vLK~~~~~---------~~~~~i~~e   65 (307)
T TIGR00938         3 VYTSVSDEEMSSFLDGYDL--------GELLSLKGIAEGVENSNYLLTTDVGRYILTLYEKR---------VKAEELPFF   65 (307)
T ss_pred             ccccCCHHHHHHHHHhcCC--------CCceeccccCCccccceEEEEeCCCcEEEEEecCC---------CCHHHHHHH
Confidence            4788999999999986531        23457999999999999999988789999975431         124577788


Q ss_pred             HHHHHHhhccCCCCCceEEEEc--------CCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccc
Q 045250           85 ALALKEHGKLCPDHVPEVYHFD--------RTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLY  156 (165)
Q Consensus        85 ~~~L~~~~~~~p~~vP~v~~~D--------~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~  156 (165)
                      .++++.+.+. ...||+++...        .....++||++++  ..+.      ...+..+.++|+.||++|..+.+|-
T Consensus        66 ~~~l~~L~~~-g~pvp~~i~t~~g~~~~~~~g~~~~l~e~i~G--~~~~------~~~~~~~~~~G~~LA~lH~~~~~~~  136 (307)
T TIGR00938        66 LALTTHLAAR-GLPVPKPVKSRDGRQLSTLAGKPACLVEFLQG--LSVG------RPTAMHCRPVGEVLAWMHLAGAHFP  136 (307)
T ss_pred             HHHHHHHHHC-CCCCCccccCCCCCeehhcCCeEEEEEEeCCC--CCCC------CCCHHHHHHHHHHHHHHHhhhccCC
Confidence            8988888652 22366666532        2334689999983  3331      1235678999999999999998875


Q ss_pred             cC
Q 045250          157 RT  158 (165)
Q Consensus       157 l~  158 (165)
                      .+
T Consensus       137 ~~  138 (307)
T TIGR00938       137 EN  138 (307)
T ss_pred             CC
Confidence            44

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.67  E-value=1.7e-07  Score=67.42  Aligned_cols=102  Identities=22%  Similarity=0.192  Sum_probs=78.5

Q ss_pred             eEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC--CceEEE
Q 045250           37 IKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRT--MSLIGM  114 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e--~~~~vM  114 (165)
                      +++++.|..|-||++...++.++||+..+...         ..+...|..+|+.+... +..+|+++.+...  ...++|
T Consensus         3 ~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~---------~~~~~~e~~~~~~l~~~-~~~~p~~~~~~~~~~~~~~v~   72 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTKDEDYVLKINPSREK---------GADREREVAILQLLARK-GLPVPKVLASGESDGWSYLLM   72 (155)
T ss_pred             ceecccccccceEEEEecCCeEEEEecCCCCc---------hhHHHHHHHHHHHHHHc-CCCCCeEEEEcCCCCccEEEE
Confidence            57899999999999998777999998754322         46788899999999876 6788999888765  799999


Q ss_pred             ecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250          115 RYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 Edl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      |+++.  ..+...  .....+.++.++++.|+.+|..+
T Consensus        73 e~~~g--~~~~~~--~~~~~~~~~~~~~~~l~~lh~~~  106 (155)
T cd05120          73 EWIEG--ETLDEV--SEEEKEDIAEQLAELLAKLHQLP  106 (155)
T ss_pred             EecCC--eecccC--CHHHHHHHHHHHHHHHHHHhCCC
Confidence            99983  333321  11123568899999999999764

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=98.66  E-value=1.4e-07  Score=79.32  Aligned_cols=98  Identities=23%  Similarity=0.245  Sum_probs=69.0

Q ss_pred             CCcceeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--CCC
Q 045250           32 FDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD--RTM  109 (165)
Q Consensus        32 ~~~~~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--~e~  109 (165)
                      ..-.++++++||-+|-.||++...+++.||....-.+          .....|++-|+.+++..|..||+++.+-  .+.
T Consensus        17 ~~i~~~~~v~GG~i~~a~~~~~~~~~~FvK~~~~~~~----------~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~   86 (288)
T PF03881_consen   17 FKITSIEPVSGGDINEAYRLDTDGGSYFVKVNSESGR----------DMFEGEAEGLKALAEANPIRVPKVIAWGEYDDD   86 (288)
T ss_dssp             ----EEEEE--SSSSEEEEEETTS-EEEEEEEEGGGC----------CHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSC
T ss_pred             CceeeeEecCCCChhheEEEECCCccEEEEecChhhH----------HHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCC
Confidence            3456999999999999999996666999998872211          4788999999999998999999999975  356


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHh
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLF  150 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~  150 (165)
                      +.++||++.. .          ...+...+.+|+.||++|.
T Consensus        87 ~fLlle~l~~-~----------~~~~~~~~~lg~~LA~LH~  116 (288)
T PF03881_consen   87 AFLLLEFLEM-G----------SPSPPDWEELGRQLAALHQ  116 (288)
T ss_dssp             CEEEEE-------------------CCHHHHHHHHHHHHHH
T ss_pred             ceEEEEeecC-C----------CCCchhHHHHHHHHHHHhh
Confidence            7899999983 2          1123468999999999999

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>PLN02876 acyl-CoA dehydrogenase

Probab=98.64  E-value=5e-07  Score=85.39  Aligned_cols=135  Identities=19%  Similarity=0.243  Sum_probs=94.3

Q ss_pred             ccCHhhHHHHHHhCC-CcccccCCCCCcceeEeccCCceeEEEEEEeCCC----eEEEEecCccccccCCCCCCChHHHH
Q 045250            8 PLDDKSLLEYIKATP-SLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSG----SFVIKQALPYVRCIGESWPMTKERAY   82 (165)
Q Consensus         8 ~l~~~~v~~Yl~~~~-~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~g----svIvKqa~p~~r~~~~~~~l~~~R~~   82 (165)
                      .++.+.+..||+++. .+    +.+.+.++++.+++|.+|.+|+++..++    .+|+|...+-..      ..+.....
T Consensus        17 ~~d~~~l~~~l~~~~~~~----~~~~~~~~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~------~~~~~~~~   86 (822)
T PLN02876         17 RFDEDALLRYAAANVAGF----PVPPSTFKVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKL------LQSAHAVE   86 (822)
T ss_pred             cCCHHHHHHHHHHhCCCc----CCCccceeEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCcc------CccHHHHH
Confidence            578899999999752 11    1122347899999999999999987653    678887654321      22345778


Q ss_pred             HHHHHHHHhhccCCCCCceEEEEcCC-----CceEEEecCCCCchHHHHHHHcCCC---CHHHHHHHHHHHHHHHhcccc
Q 045250           83 FEALALKEHGKLCPDHVPEVYHFDRT-----MSLIGMRYLEPPHIILRKGLIAGIK---YPLLAEHMSEFMAKTLFYTSL  154 (165)
Q Consensus        83 ~E~~~L~~~~~~~p~~vP~v~~~D~e-----~~~~vMEdl~~~~~~lr~~l~~g~~---~~~~a~~iG~~La~~h~~tsd  154 (165)
                      .|+++|+.++......||++|.+..+     ...+|||+++  +.++.+....+..   ...++.++++.|+++|...-+
T Consensus        87 rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVME~v~--G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~  164 (822)
T PLN02876         87 REYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIMEYLE--GRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVD  164 (822)
T ss_pred             HHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEEEecC--CcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCch
Confidence            99999999986555679999988554     4568999998  3444332211111   124788999999999997643

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=98.61  E-value=3.3e-07  Score=75.64  Aligned_cols=120  Identities=15%  Similarity=0.113  Sum_probs=86.3

Q ss_pred             hhHHHHHHhCCCcccccCCCCCcceeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHh
Q 045250           12 KSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEH   91 (165)
Q Consensus        12 ~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~   91 (165)
                      +++..++.+-+        ..+..+++++++|..|.+|+|...++++|+|...+          -+.++...|.++++.+
T Consensus         2 ~~l~~~l~~y~--------~~~~~~i~~i~~G~~n~~y~v~~~~~~~vLr~~~~----------~~~~~~~~e~~~l~~L   63 (296)
T cd05153           2 EELASFLADYD--------LGELLSFEGISAGIENTNYFVTTDSGRYVLTLFEK----------VSAEELPFFLALLDHL   63 (296)
T ss_pred             HHHHHHHHHcC--------CCchhheecccCccccceEEEEeCCCcEEEEEcCC----------CChHhccHHHHHHHHH
Confidence            45566666543        12345899999999999999998877999998654          1236788899999998


Q ss_pred             hccCCCCCceEEEEcC--------CCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccC
Q 045250           92 GKLCPDHVPEVYHFDR--------TMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRT  158 (165)
Q Consensus        92 ~~~~p~~vP~v~~~D~--------e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~  158 (165)
                      .+. ...||+++....        ....++|+++++  ..+..      ..+....++|+.||++|..++++..+
T Consensus        64 ~~~-g~~vp~~i~~~~g~~~~~~~~~~~~l~~~i~G--~~~~~------~~~~~~~~lg~~La~lH~~~~~~~~~  129 (296)
T cd05153          64 AER-GLPVPRPIADRDGEYLSELAGKPAALVEFLAG--EHLTR------PTAAHCRQIGEALARLHLAAQSFPGE  129 (296)
T ss_pred             HHC-CCCCCccccCCCCcEeeeeCCceEEEEEeCCC--CCCCC------CCHHHHHHHHHHHHHHHHHhccCCcc
Confidence            764 234777765433        234689999983  23321      34678999999999999998876544

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>TIGR02721 ycfN_thiK thiamine kinase

Probab=98.60  E-value=2.7e-07  Score=75.04  Aligned_cols=101  Identities=14%  Similarity=0.147  Sum_probs=73.5

Q ss_pred             eEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEec
Q 045250           37 IKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRY  116 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vMEd  116 (165)
                      +++++||..|.+||++.+++++|+|...+-.+      .+..+| ..|+++|+.+++.  +.+|+++++|+  ..+|||+
T Consensus         1 ~~~~~~G~tn~~y~~~~~~~~~vlR~~~~~~~------~~~~~r-~~E~~~l~~l~~~--g~~P~~i~~~~--~~~v~e~   69 (256)
T TIGR02721         1 VQTLSGGLTNRSWRIEHPGISFVWRPQSPVCK------ALGVDR-QREYQILQALSAL--GLAPKPILVNE--HWLLVEW   69 (256)
T ss_pred             CCcCCCcCcCCeEEEEeCCccEEEeeCCcccc------cccCcH-HHHHHHHHHHHhc--CCCCceEEEeC--CEEEEEe
Confidence            35789999999999996655999997654322      122234 6699999999874  24899999986  4789999


Q ss_pred             CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccc
Q 045250          117 LEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTS  153 (165)
Q Consensus       117 l~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ts  153 (165)
                      ++  +..+...   -...+....++++.|+++|....
T Consensus        70 i~--G~~~~~~---~~~~~~~~~~la~~l~~lH~~~~  101 (256)
T TIGR02721        70 LE--GEVITLD---QFVALDLLLELAALLHQLHSQPR  101 (256)
T ss_pred             cc--Ccccccc---cccCchhHHHHHHHHHHHhCCCC
Confidence            98  3444321   11245678999999999998764

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PRK10593 hypothetical protein; Provisional

Probab=98.60  E-value=1.6e-07  Score=78.91  Aligned_cols=109  Identities=13%  Similarity=0.077  Sum_probs=79.4

Q ss_pred             cceeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-----CC
Q 045250           34 DLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD-----RT  108 (165)
Q Consensus        34 ~~~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-----~e  108 (165)
                      ..+++++++|..|-||++.+.+++++||.....         .+.+-...|++.|+.+++.....||+|+..-     ..
T Consensus        16 ~~~~~~i~~G~~~~vy~~~~~~~~~~~k~~~~~---------~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g   86 (297)
T PRK10593         16 LSRVECISEQPYAALWALYDSQGNPMPLMARSF---------STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPG   86 (297)
T ss_pred             hheeeecCCccceeEEEEEcCCCCEEEEEeccc---------ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCC
Confidence            348999999999999999988788888985421         1235788999999999886557899999743     24


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccc
Q 045250          109 MSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTS  153 (165)
Q Consensus       109 ~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ts  153 (165)
                      ...+|||++.  +.++.+..........+++.++..||++|..++
T Consensus        87 ~~~LVmE~i~--G~~~~~~~~~~~~~~~l~~~l~~~La~LH~~~~  129 (297)
T PRK10593         87 PDVLLLERLR--GVSVEAPARTPERWEQLKDQIVEGLLAWHRIDS  129 (297)
T ss_pred             CeEEEEeccC--CEecCCCCCCHHHHHHHHHHHHHHHHHHhCCCh
Confidence            4899999998  334433111111123567778899999999764

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=98.53  E-value=4.2e-07  Score=75.43  Aligned_cols=104  Identities=15%  Similarity=0.099  Sum_probs=76.5

Q ss_pred             ceeEeccCCceeEEEEEEeCC-------C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc
Q 045250           35 LTIKEVGDGNLNFVYIVVGTS-------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD  106 (165)
Q Consensus        35 ~~v~~l~~Gn~N~v~rV~~~~-------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D  106 (165)
                      +++++++||..|.+|+|+..+       + ++|+|...+       +..... ....|.++++.+++.-  .+|++++++
T Consensus         1 ~~i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~-------~~~~~~-~r~~E~~~~~~l~~~g--~~P~~~~~~   70 (302)
T cd05156           1 LEVSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQ-------SVELLI-DRERELVVFARLSERN--LGPKLYGIF   70 (302)
T ss_pred             CeEEEecCcccceeEEEEcCCcccccCCCCeEEEEEecC-------CCccee-chHHHHHHHHHHHhCC--CCCceEEEe
Confidence            368999999999999999765       3 777777332       222222 3478999999998853  589999999


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccccc
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLL  155 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~  155 (165)
                      ++  ..|||++. + ..+....+   ..+..++++|..|+++|......
T Consensus        71 ~~--~~v~e~i~-G-~~l~~~~~---~~~~~~~~ia~~L~~lH~~~~~~  112 (302)
T cd05156          71 PN--GRIEEFIP-S-RTLTTEEL---RDPDISAEIARRMAKLHSIVVPL  112 (302)
T ss_pred             CC--CchhheeC-C-CcCCHhHc---CCcHHHHHHHHHHHHhhCCCCCC
Confidence            74  56899998 3 34443322   24678999999999999987653

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=98.44  E-value=1e-06  Score=70.87  Aligned_cols=102  Identities=17%  Similarity=0.110  Sum_probs=75.1

Q ss_pred             eEecc-CCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC-----Cc
Q 045250           37 IKEVG-DGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRT-----MS  110 (165)
Q Consensus        37 v~~l~-~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e-----~~  110 (165)
                      ++++. ||..|.||++.   +++|+|...+..         +..+...|+++|+.+.+.++..+|+++.....     ..
T Consensus         2 ~~~~~~gG~~n~vy~~~---~~~VlR~~~~~~---------~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~   69 (235)
T cd05155           2 IEPVDSGGTDNATFRLG---DDMSVRLPSAAG---------YAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWP   69 (235)
T ss_pred             ceeccCCCcccceEEcC---CceEEEcCCccc---------hHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcc
Confidence            45566 89999999983   378889755321         23578899999999987678889999987654     23


Q ss_pred             eEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccc
Q 045250          111 LIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSL  154 (165)
Q Consensus       111 ~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd  154 (165)
                      .++||+++  +.++......  ....+++++|++|+++|..+..
T Consensus        70 ~~l~~~i~--G~~l~~~~~~--~~~~l~~~la~~l~~LH~i~~~  109 (235)
T cd05155          70 WSVYRWLE--GETATAAALS--DPSEFAEDLADFLAALRQIDPS  109 (235)
T ss_pred             eEEEEeec--CCCCCccccC--CHHHHHHHHHHHHHHHhCCCcc
Confidence            67899998  4566543211  1237899999999999987654

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.43  E-value=1.3e-06  Score=70.67  Aligned_cols=102  Identities=16%  Similarity=0.084  Sum_probs=76.3

Q ss_pred             eEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEEE
Q 045250           37 IKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLIGM  114 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~vM  114 (165)
                      .+++++|..|-||+..  ++++|+|...+..         +..+...|+++|+.+... +-.||+++++  |.+...++|
T Consensus         6 ~~~i~~G~t~~~y~~~--~~~~VlR~~~~~~---------~~~~i~~E~~~l~~l~~~-glpvP~~~~~~~~~~~~glv~   73 (226)
T TIGR02172         6 WTQTGEGGNGESYTHK--TGKWMLKLYNPGF---------DKETIKREFDASRKVFSL-GIPTPHPFDLVEDGGRLGLIY   73 (226)
T ss_pred             heeecCCCCcceeEec--CCCEEEEeCCCCC---------CHHHHHHHHHHHHHHHHc-CCCCCceEEEEecCCeeeeee
Confidence            4789999999999853  3388999987533         335678899999999864 6779999999  666778899


Q ss_pred             ecCCCCchHHHHHHHcCCC-CHHHHHHHHHHHHHHHhc
Q 045250          115 RYLEPPHIILRKGLIAGIK-YPLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       115 Edl~~~~~~lr~~l~~g~~-~~~~a~~iG~~La~~h~~  151 (165)
                      |.++ +...+...+..... .+.++..+|..|+++|..
T Consensus        74 e~i~-G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~  110 (226)
T TIGR02172        74 ELIV-GKRSFSRIISDNPSRLEEIAKIFAEMAKKLHST  110 (226)
T ss_pred             eecC-CccchhhhhcCCHHHHHHHHHHHHHHHHHHhCC
Confidence            9998 33334333332222 246899999999999975

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=98.35  E-value=8e-06  Score=66.59  Aligned_cols=114  Identities=13%  Similarity=0.015  Sum_probs=82.3

Q ss_pred             eEecc-CCceeEEEEEEeCCCeEEEEecCc-c--ccccCCC--C-CCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC-
Q 045250           37 IKEVG-DGNLNFVYIVVGTSGSFVIKQALP-Y--VRCIGES--W-PMTKERAYFEALALKEHGKLCPDHVPEVYHFDRT-  108 (165)
Q Consensus        37 v~~l~-~Gn~N~v~rV~~~~gsvIvKqa~p-~--~r~~~~~--~-~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e-  108 (165)
                      -..+| .|..|-||+|...+++++||+... -  .++...+  | .....|...|++.|+.+... .-.||+++.+... 
T Consensus        36 ~~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~-gi~vP~pl~~~~~~  114 (239)
T PRK01723         36 ARVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEA-GLPVPRPIAARVVR  114 (239)
T ss_pred             CceeecCCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhC-CCCCceeEeeeeee
Confidence            34675 899999999999877999998853 1  1221112  1 35667899999999988763 3346777765321 


Q ss_pred             C-----ceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250          109 M-----SLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~-----~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      .     ..+|||+++ +...|.+.+.++........+|+.+|+.+|...
T Consensus       115 ~~~~~~~~lV~e~l~-G~~~L~~~l~~~~l~~~~~~~i~~~l~~lH~~G  162 (239)
T PRK01723        115 HGLFYRADILIERIE-GARDLVALLQEAPLSEEQWQAIGQLIARFHDAG  162 (239)
T ss_pred             cCcceeeeEEEEecC-CCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHCC
Confidence            1     249999998 557888887776666778899999999999875

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=98.30  E-value=6.2e-06  Score=68.72  Aligned_cols=108  Identities=19%  Similarity=0.069  Sum_probs=77.3

Q ss_pred             cceeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceE
Q 045250           34 DLTIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLI  112 (165)
Q Consensus        34 ~~~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~  112 (165)
                      .-++...+.|..|.||+|.+.+| .+|||+++ ...+        ..|...|+++|+.++..+|..+|+++..+.+  .+
T Consensus        13 ~~~~~~~~~g~~~~v~~i~~~~g~~~VlR~p~-~~~~--------~~~l~rE~~vL~~L~~~l~vpvP~~~~~~~~--~~   81 (276)
T cd05152          13 PETLSLNESGLDFQVVFAKDTDGVPWVLRIPR-RPDV--------SERAAAEKRVLALVRKHLPVQVPDWRVHTPE--LI   81 (276)
T ss_pred             CCcceecCCcceeEEEEEEcCCCCeEEEEecC-CHHH--------HHHHHHHHHHHHHHHhcCCCCCCceeeecCc--eE
Confidence            34667777888899999977666 99999995 2222        2578899999999998789999998877765  46


Q ss_pred             EEecCCCCchHHHH-HHHc---------CCCCHHHHHHHHHHHHHHHhcccc
Q 045250          113 GMRYLEPPHIILRK-GLIA---------GIKYPLLAEHMSEFMAKTLFYTSL  154 (165)
Q Consensus       113 vMEdl~~~~~~lr~-~l~~---------g~~~~~~a~~iG~~La~~h~~tsd  154 (165)
                      +|+.++.  ..+.. ....         ....+.+|.++|++|+++|....+
T Consensus        82 ~y~~i~G--~p~~~~~~~~~~~~~~~~~~~~~~~la~~la~~La~LH~i~~~  131 (276)
T cd05152          82 AYPKLPG--VPAATIDPEIGEYVWNFDHKNPPEVFIESLAKALAELHSIPQD  131 (276)
T ss_pred             EEeccCC--CcccccCcccccceecccCCCcCHHHHHHHHHHHHHHhCCChh
Confidence            7888873  22210 0000         123467999999999999977653

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=98.20  E-value=1.4e-05  Score=68.36  Aligned_cols=131  Identities=16%  Similarity=0.143  Sum_probs=97.5

Q ss_pred             cccCHhhHHHHHHhCCCcccccCCCCCcceeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHH
Q 045250            7 RPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEAL   86 (165)
Q Consensus         7 ~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~   86 (165)
                      ..++...+..||..+-  +   + -.+...+++.++|.+|-+|+....+.++||- +.|....     ..+.++...|++
T Consensus         6 ~~~~~~~l~~~l~~~i--p---~-~~~~~~v~~~~~G~sn~t~~~~~~~~~~vlR-~P~~~~~-----~~~~~~~~re~~   73 (321)
T COG3173           6 VALDIAALAAYLRSQI--P---G-YAGLLIVEEISGGWSNDTFRLGDTGQKYVLR-KPPRGDP-----VESAHDEKREYR   73 (321)
T ss_pred             ccCCHHHHHHHHHhhC--c---C-cCCCceeeeccCCcccceEEEecCCceEEEe-cCCcccc-----chhhhHHHhHHH
Confidence            4567788899998641  1   1 2345688889999999999999875589988 5553333     245677788888


Q ss_pred             HHHHhhccCCCCCceEEEEcCCCc----eEEEecCCCCchHHHHHHHcCCCCHHHHH-HHHHHHHHHHhcc
Q 045250           87 ALKEHGKLCPDHVPEVYHFDRTMS----LIGMRYLEPPHIILRKGLIAGIKYPLLAE-HMSEFMAKTLFYT  152 (165)
Q Consensus        87 ~L~~~~~~~p~~vP~v~~~D~e~~----~~vMEdl~~~~~~lr~~l~~g~~~~~~a~-~iG~~La~~h~~t  152 (165)
                      .|+.+... +..+|..+.+=.+.+    -+||+++.  +...+..+..+.....++. ++|++||.+|..-
T Consensus        74 ~i~~l~~~-~vP~p~~~~~~~~~~~g~pf~v~~~ve--Ge~~~~~~~~~~~~~~~~~~~l~~~La~LH~id  141 (321)
T COG3173          74 VIAALLDV-DVPVPRAFGLCGEGYLGTPFYVMEWVE--GEVVWSALPPESLGRQFALDALADFLAELHSID  141 (321)
T ss_pred             HHHHhcCC-CCCCcccccccccCCCCCceEEEEEec--ceeccCcCCcccchHHHHHHHHHHHHHHHhCCC
Confidence            88888886 778899998888888    99999998  3344454444443345666 9999999999876

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.16  E-value=1e-05  Score=72.95  Aligned_cols=110  Identities=24%  Similarity=0.157  Sum_probs=83.9

Q ss_pred             eEeccCCceeEEEEEEeCCCeEEEEecCccc-cccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEe
Q 045250           37 IKEVGDGNLNFVYIVVGTSGSFVIKQALPYV-RCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMR  115 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~-r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vME  115 (165)
                      .+.+|.|....||++....+.+++|...+.. +....+..+..+|...|+++|+.+... ...+|.++..+++...+|||
T Consensus       338 ~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~~p~~~~~~~~~~~lv~E  416 (535)
T PRK09605        338 DHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRA-GVPTPVIYDVDPEEKTIVME  416 (535)
T ss_pred             cceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhccc-CCCeeEEEEEeCCCCEEEEE
Confidence            4678999999999998776677777766543 221224456678899999999988652 34578889999999999999


Q ss_pred             cCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250          116 YLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       116 dl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      |++  +..|.+.+.   ....++.+++..|+.+|...
T Consensus       417 ~~~--g~~L~~~l~---~~~~~~~~i~~~L~~lH~~g  448 (535)
T PRK09605        417 YIG--GKDLKDVLE---GNPELVRKVGEIVAKLHKAG  448 (535)
T ss_pred             ecC--CCcHHHHHH---HHHHHHHHHHHHHHHHHhCC
Confidence            997  467877765   23568999999999999864

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.12  E-value=5.5e-05  Score=62.02  Aligned_cols=107  Identities=10%  Similarity=-0.027  Sum_probs=77.6

Q ss_pred             eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHH------HHHHHHHHHHhhccCCCCCceEEEEcCC-
Q 045250           36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKER------AYFEALALKEHGKLCPDHVPEVYHFDRT-  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R------~~~E~~~L~~~~~~~p~~vP~v~~~D~e-  108 (165)
                      .++.+++|-.+.||.+.+..+.+|||+=.|.....    +.-..|      ...|+..+..+.. ..-.+|..++.|.+ 
T Consensus        35 ~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~----~~~~~~f~~g~~~e~Ea~~l~rL~~-~GI~~~~d~~~~~~~  109 (232)
T PRK10359         35 TIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRT----ERFLKSFVKGDYYENLIVQTDRVRS-EGLASLNDFYLLAER  109 (232)
T ss_pred             EEEEecCCCceEEEEEecCCCcEEEEEechhcCch----HHHHHhhhhhHHHHHHHHHHHHHHH-CCCCcceEeeeeccc
Confidence            78889999999999987754499999988776421    111233      3466667777744 35567788877765 


Q ss_pred             -------CceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250          109 -------MSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 -------~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                             ...++|||++  +..|++..   ...+....+++..|+.+|...
T Consensus       110 ~~~~~~~~~~lvmEyi~--G~tL~~~~---~~~~~~~~~i~~~l~~lH~~g  155 (232)
T PRK10359        110 KTLRYAHTYIMLIEYIE--GVELNDMP---EISEDVKAKIKASIESLHQHG  155 (232)
T ss_pred             ccccccCCeEEEEEEEC--CccHHHhh---hccHHHHHHHHHHHHHHHHcC
Confidence                   4788999998  45777752   234567889999999999753

>PLN02236 choline kinase

Probab=98.05  E-value=2.4e-05  Score=67.10  Aligned_cols=123  Identities=9%  Similarity=0.039  Sum_probs=85.3

Q ss_pred             HhhHHHHHHhCC-CcccccCCCCCcceeEeccCCceeEEEEEEeCC-----C-eEEEEecCccccccCCCCCCChHHHHH
Q 045250           11 DKSLLEYIKATP-SLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTS-----G-SFVIKQALPYVRCIGESWPMTKERAYF   83 (165)
Q Consensus        11 ~~~v~~Yl~~~~-~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~-----g-svIvKqa~p~~r~~~~~~~l~~~R~~~   83 (165)
                      +.++...+++.. ... ++ .+.+.+++++++||..|.+|+|+..+     + ++|+|.-.+..       .+-.+| ..
T Consensus        16 ~~~~~~~~~~~~~~w~-~~-~~~~~~~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t-------~~~idR-~~   85 (344)
T PLN02236         16 PDELKRILHSLASKWG-DV-VDDEALQVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGV-------ELFFDR-DD   85 (344)
T ss_pred             hHHHHHHHHHhcchhc-CC-CCcCcEEEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCC-------Ceeech-HH
Confidence            445666666531 111 00 13467899999999999999998532     2 68888665432       244567 78


Q ss_pred             HHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250           84 EALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus        84 E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      |.++++.+++.  +..|+++++++..  .|.||++  ...|...-+   ..+.+..+++..|+++|...
T Consensus        86 E~~~~~~l~~~--gl~P~~~~~~~~g--~v~efi~--g~~l~~~~l---~~~~~~~~ia~~L~~lH~~~  145 (344)
T PLN02236         86 EIRTFECMSRH--GQGPRLLGRFPNG--RVEEFIH--ARTLSAADL---RDPEISALIAAKLREFHSLD  145 (344)
T ss_pred             HHHHHHHHHHc--CCCCceEEEECCc--eEEEeeC--CCCCCHHHc---CChHHHHHHHHHHHHHhCCC
Confidence            99999999884  5689999998654  6899997  345543211   34678999999999999854

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.05  E-value=2.9e-05  Score=61.68  Aligned_cols=94  Identities=18%  Similarity=0.073  Sum_probs=75.2

Q ss_pred             eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC------CceEEEecCCCCchHHHHHHHc
Q 045250           57 SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRT------MSLIGMRYLEPPHIILRKGLIA  130 (165)
Q Consensus        57 svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e------~~~~vMEdl~~~~~~lr~~l~~  130 (165)
                      ++.+|.-..++...---.++...|...|++.++.+.+. ...||+++.|...      .+.+|||+++ +...|.+.+.+
T Consensus        34 ~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~-Gi~tP~pva~~~~r~~~~~~s~lite~l~-~~~~L~~~~~~  111 (206)
T PF06293_consen   34 RYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREA-GIPTPEPVAYGERRKGGGYRSYLITEALP-GAQDLRDLLQQ  111 (206)
T ss_pred             EEEECCeechhccchhhhcccchHHHHHHHHHHHHHHc-CCCCCcEEEEEEEcCCCceeEEEEEEeCC-CcccHHHHHHh
Confidence            78888776665321123458889999999999999885 7779999999887      4589999999 68899998886


Q ss_pred             -----CCCCHHHHHHHHHHHHHHHhcc
Q 045250          131 -----GIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       131 -----g~~~~~~a~~iG~~La~~h~~t  152 (165)
                           ......+.+++|.+++++|...
T Consensus       112 ~~~~~~~~~~~ll~~l~~~i~~lH~~g  138 (206)
T PF06293_consen  112 WEQLDPSQRRELLRALARLIAKLHDAG  138 (206)
T ss_pred             hcccchhhHHHHHHHHHHHHHHHHHCc
Confidence                 3334689999999999999875

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=98.00  E-value=7.8e-05  Score=64.05  Aligned_cols=132  Identities=15%  Similarity=0.134  Sum_probs=96.0

Q ss_pred             CCCCCccccCHhhHHHHHHhCCCcccccCCCCCcceeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHH
Q 045250            1 MAFTEFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKER   80 (165)
Q Consensus         1 ~~~~~~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R   80 (165)
                      |++..|..++++++.+.|...+.        ....+...+.. .-|.+|+|.+.+|+.|||-..|- +.        ..-
T Consensus         3 ~~~~~~~~~~~~~~~~~l~~~~~--------g~~~~~~~l~s-~eN~~f~~~~~~g~~iLki~~~~-~~--------~~~   64 (331)
T COG2334           3 DSMAVFTPLTSDEAAAALEAYHY--------GLDGSLRGLNS-EENSNFRVQTEDGRYILKIYRPG-WT--------RAE   64 (331)
T ss_pred             cccccccCcChHHHHHHHHhcCc--------Ccccccccccc-ccCceEEEEecCCCeEEEEecCC-CC--------HHH
Confidence            45678999999999999987542        22345566666 78999999999997799998876 32        246


Q ss_pred             HHHHHHHHHHhhcc-CCCCCceEEEEcC-------C--CceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHh
Q 045250           81 AYFEALALKEHGKL-CPDHVPEVYHFDR-------T--MSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLF  150 (165)
Q Consensus        81 ~~~E~~~L~~~~~~-~p~~vP~v~~~D~-------e--~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~  150 (165)
                      ...|-++|+.+++- .|..+| +-.-|-       .  -..-+.++++  +..+.+     ..-...++.+|++||++|.
T Consensus        65 i~~el~~l~~La~~~i~v~~P-l~~~dG~~l~~~~~~~r~a~lf~~l~--G~~~~~-----~~~~~~~~~lG~~LgrlH~  136 (331)
T COG2334          65 IPFELALLQHLAERGIPVPAP-LPSLDGELLEALSGGPRPAALFEYLP--GRPLER-----DDNAEQLEELGRMLGRLHL  136 (331)
T ss_pred             HHHHHHHHHHHHHcCCCCCCC-ccCCCcchhhhccCCceeEEEEEecC--CcCcCC-----CCcHHHHHHHHHHHHHHHH
Confidence            77888899998874 344444 222221       2  5667889998  445543     3446789999999999999


Q ss_pred             cccccccC
Q 045250          151 YTSLLYRT  158 (165)
Q Consensus       151 ~tsd~~l~  158 (165)
                      .+.+|-+.
T Consensus       137 a~~~f~~~  144 (331)
T COG2334         137 ALRGFPFE  144 (331)
T ss_pred             HhCcCCcc
Confidence            99999754

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=97.93  E-value=6.9e-05  Score=63.80  Aligned_cols=105  Identities=12%  Similarity=0.109  Sum_probs=76.5

Q ss_pred             CCCcceeEeccCCceeEEEEEEeCC----C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE
Q 045250           31 KFDDLTIKEVGDGNLNFVYIVVGTS----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF  105 (165)
Q Consensus        31 ~~~~~~v~~l~~Gn~N~v~rV~~~~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~  105 (165)
                      +.++++++++.||..|.+|||+..+    + ++|||.-.+..     +  .-.+| ..|..+++.+++.  +..|+++++
T Consensus        13 ~~~~i~i~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t-----~--~~IdR-~~E~~il~~l~~~--gl~P~~l~~   82 (330)
T PLN02421         13 DDSDFSVERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNT-----D--YVIDR-ERELQAIKYLSAA--GFGAKLLGV   82 (330)
T ss_pred             CcCceEEEEeCCcccceEEEEEecCCCCCCceEEEEEecCCc-----C--eEech-HHHHHHHHHHHhc--CCCCceeEE
Confidence            4568999999999999999997543    2 78888665432     2  23445 5699999999874  567999998


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250          106 DRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      ++ +. +|.|++.  +..|...-+   ..|.....|+..|+++|...
T Consensus        83 ~~-~G-~i~~fi~--g~~l~~~~l---~~~~~~~~ia~~L~~lH~~~  122 (330)
T PLN02421         83 FG-NG-MIQSFIN--ARTLTPSDM---RKPKVAAEIAKELRRLHQVE  122 (330)
T ss_pred             eC-Cc-Eeehhhc--CCCCChHHC---CCHHHHHHHHHHHHHHhCCC
Confidence            84 33 5899996  455533111   34678999999999999854

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=97.93  E-value=0.00014  Score=60.73  Aligned_cols=111  Identities=14%  Similarity=-0.012  Sum_probs=76.5

Q ss_pred             eEeccCCceeEEEEEEeCCCeEEEEecCcccc--ccCCC--CCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC-----
Q 045250           37 IKEVGDGNLNFVYIVVGTSGSFVIKQALPYVR--CIGES--WPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR-----  107 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r--~~~~~--~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~-----  107 (165)
                      +++..+.+   |+|++..+..+.||+-.+...  ....-  +..|..+...|++.+..+.+. ...||+++.|-.     
T Consensus        30 v~~~~~rr---vvr~~~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~-GIptP~pVa~~e~~~~~  105 (268)
T PRK15123         30 FRELEGRR---TLRFELAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEV-GVDTMTGVAFGERGSNP  105 (268)
T ss_pred             EecCCCce---EEEEEECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHc-CCCCCCeeEEEEecCCC
Confidence            44444444   678877645999998866542  11111  124455789999999999886 667777755542     


Q ss_pred             --CCceEEEecCCCCchHHHHHHHcC---CCC----HHHHHHHHHHHHHHHhcc
Q 045250          108 --TMSLIGMRYLEPPHIILRKGLIAG---IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 --e~~~~vMEdl~~~~~~lr~~l~~g---~~~----~~~a~~iG~~La~~h~~t  152 (165)
                        ..+.+|||+++ +..++++.+.+.   ...    ..+..++|.+++++|...
T Consensus       106 ~~~~s~LVte~l~-~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~G  158 (268)
T PRK15123        106 ATRTSFIITEDLA-PTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAG  158 (268)
T ss_pred             ccceeEEEEeeCC-CCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCc
Confidence              34789999999 677888887542   111    257789999999999875

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.91  E-value=0.00011  Score=60.90  Aligned_cols=99  Identities=18%  Similarity=0.150  Sum_probs=76.3

Q ss_pred             CcceeEeccCCceeEEEEEEeCCCeEEEEecC-ccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC--CC
Q 045250           33 DDLTIKEVGDGNLNFVYIVVGTSGSFVIKQAL-PYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR--TM  109 (165)
Q Consensus        33 ~~~~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~-p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~--e~  109 (165)
                      +.-+.++++||-+|--|||.+...++.||.-. +++.           =...|+.-|+.+++.-...||+++..+.  ..
T Consensus        17 ~i~er~~v~gG~inea~~v~dg~~~~FvK~n~~~~~~-----------~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~   85 (286)
T COG3001          17 EIKEREEVSGGDINEAWRLRDGTDPFFVKCNQREQLS-----------MFTAEADGLELLARSNTITVPKVIAVGASRDH   85 (286)
T ss_pred             hhhcccccCCccccceeEeecCCcceEEEecchhhHH-----------HHHHHHHHHHHHHhcCCccccceEEecCCCCe
Confidence            44588999999999999999876678777432 2221           1345666688888876688999998765  56


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTS  153 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ts  153 (165)
                      +.+|||||+.           |..+++-+.++|.-||++|..+.
T Consensus        86 sylVle~L~~-----------~~~d~~~~~~~GqqLA~LH~~~~  118 (286)
T COG3001          86 SYLVLEYLPT-----------GPLDAHSAFILGQQLARLHQWGG  118 (286)
T ss_pred             eEEEEeeccC-----------CCCCchhHHHHHHHHHHHHhhcC
Confidence            7899999983           45567788999999999999874

>PRK09902 hypothetical protein; Provisional

Probab=97.86  E-value=0.00039  Score=56.51  Aligned_cols=111  Identities=12%  Similarity=0.047  Sum_probs=84.8

Q ss_pred             CceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC------CCceEEEec
Q 045250           43 GNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR------TMSLIGMRY  116 (165)
Q Consensus        43 Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~------e~~~~vMEd  116 (165)
                      |-..=|+|+...+..+-|||-..+++.. .-.|++..=...|...|+.+.+. ...||++.++..      -.+.||.|+
T Consensus        29 gG~SgV~r~~~~g~~~ylKrq~nhl~~s-~r~P~g~ptf~rE~~~L~~L~~~-GvPVP~pvf~~~~k~~~~~rA~LVTe~  106 (216)
T PRK09902         29 NGMSGVQCVERNGKKLYVKRMTHHLFHS-VRYPFGRPTIVREVAVIKELERA-GVIVPKIVFGEAVKIEGEWRALLVTED  106 (216)
T ss_pred             CCcceEEEEEeCCcEEEEEeccCccccc-ccCCCCchHHHHHHHHHHHHHHc-CCCCCccceeeeeccCCceEEEEEEEe
Confidence            5555689998775589999999999742 22366666677899999999986 333999997652      348899999


Q ss_pred             CCCCchHHHHHHHcCCCC-------HHHHHHHHHHHHHHHhcc---cccc
Q 045250          117 LEPPHIILRKGLIAGIKY-------PLLAEHMSEFMAKTLFYT---SLLY  156 (165)
Q Consensus       117 l~~~~~~lr~~l~~g~~~-------~~~a~~iG~~La~~h~~t---sd~~  156 (165)
                      |+ ++.+|-+.+.++...       ..+-.++|..++++|...   .|++
T Consensus       107 L~-g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly  155 (216)
T PRK09902        107 MA-GFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCY  155 (216)
T ss_pred             CC-CCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCC
Confidence            99 799998887775542       368899999999999876   4544

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=97.80  E-value=0.00034  Score=54.54  Aligned_cols=109  Identities=17%  Similarity=0.037  Sum_probs=72.3

Q ss_pred             EeccCCceeEEEEEEeCCC-eEEEEecCccccccCC---------C-------C---CCChHHHHHHHHHHHHhhccCCC
Q 045250           38 KEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGE---------S-------W---PMTKERAYFEALALKEHGKLCPD   97 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~---------~-------~---~l~~~R~~~E~~~L~~~~~~~p~   97 (165)
                      .++|.|..-.||++.+.+| .++||.-.+-......         .       +   .+...+...|++.|+.+... ..
T Consensus         3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i   81 (190)
T cd05145           3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA-GV   81 (190)
T ss_pred             ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC-CC
Confidence            4688999999999998777 9999987765321000         0       0   01133456788888887653 44


Q ss_pred             CCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHh
Q 045250           98 HVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLF  150 (165)
Q Consensus        98 ~vP~v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~  150 (165)
                      .+|.++.++  ..++||||++. .......+.++...    ..++.++...|..+|.
T Consensus        82 ~~p~~~~~~--~~~lVmE~~~g-~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~  135 (190)
T cd05145          82 PVPEPILLK--KNVLVMEFIGD-DGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQ  135 (190)
T ss_pred             CCceEEEec--CCEEEEEEecC-CCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHH
Confidence            678888765  35899999983 32222223334332    3678889999999998

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PRK11768 serine/threonine protein kinase; Provisional

Probab=97.73  E-value=0.00066  Score=57.62  Aligned_cols=125  Identities=14%  Similarity=0.053  Sum_probs=81.1

Q ss_pred             CccccCHhhHHHHHHhCCCcccccCCCCCcceeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHH
Q 045250            5 EFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYF   83 (165)
Q Consensus         5 ~~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~   83 (165)
                      .|..||++.|.+-+...|...      .  -.+.. =++.-|.||+|.+++| .+|+|...|--      |  +.+-...
T Consensus         7 ~~~~l~p~~~~~a~~~~g~~~------~--~~~~~-l~s~eN~vy~v~~~~~~~~vlKv~r~~~------~--~~~~i~~   69 (325)
T PRK11768          7 PFQTLTPDLILDALESLGLRV------D--GRLLA-LNSYENRVYQFGDEDGRRVVAKFYRPER------W--SDAQILE   69 (325)
T ss_pred             CCCCCChHHHHHHHHHcCCCC------c--cceEe-eccccceEEEEecCCCCEEEEEEcCccc------C--CHHHHHH
Confidence            789999999999998776421      1  12333 3455699999998877 89999876432      1  3355678


Q ss_pred             HHHHHHHhhcc-CCCCCce------EEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccccc
Q 045250           84 EALALKEHGKL-CPDHVPE------VYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLL  155 (165)
Q Consensus        84 E~~~L~~~~~~-~p~~vP~------v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~  155 (165)
                      |.+++..+.+. +|...|.      +..++ ...+.+++++++  ...      ....+...+++|++||++|..+...
T Consensus        70 E~~~l~~L~~~gipv~~p~~~~G~~~~~~~-g~~~~l~~~~~G--~~~------~~~~~~~~~~lG~~LarlH~~~~~~  139 (325)
T PRK11768         70 EHAFALELAEAEIPVVAPLAFNGQTLHEHQ-GFRFALFPRRGG--RAP------ELDNLDQLEWVGRFLGRIHQVGAKR  139 (325)
T ss_pred             HHHHHHHHHHCCCCCCCCccCCCCEEEEEC-CEEEEEEeeeCC--CCC------CCCCHHHHHHHHHHHHHHHhhccCC
Confidence            88898888763 4533331      12221 234556666652  111      0123567899999999999987743

>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function

Probab=97.71  E-value=0.00013  Score=60.24  Aligned_cols=109  Identities=17%  Similarity=0.042  Sum_probs=69.8

Q ss_pred             cCCceeEEEEEEeC------CC----eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhc----cCC------CCCc
Q 045250           41 GDGNLNFVYIVVGT------SG----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGK----LCP------DHVP  100 (165)
Q Consensus        41 ~~Gn~N~v~rV~~~------~g----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~----~~p------~~vP  100 (165)
                      |+|.+..+|||+..      ++    ++|||-...-...  .+..-...=...|..+++.+..    +.+      ..+|
T Consensus         2 Gd~y~s~~~rv~v~~~~~~~~~~~~~s~ivK~~p~~~~~--~~~~~~~~~f~~E~~fY~~~~p~l~~~~~~~~~~~~~~P   79 (294)
T PF02958_consen    2 GDNYLSDMYRVTVTYELKGDGKNEPLSLIVKSPPTNPSR--REFLREMGSFRREIFFYRELLPELEELQKEAGDPFKFFP   79 (294)
T ss_pred             CCcceeEEEEEEEEEEEccCCCceEEEEEEEeCCCchhh--hhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccccceeec
Confidence            78999999999762      11    8999997621110  1122223344556666654433    222      3589


Q ss_pred             eEEEEcCCC--ceEEEecCCC-CchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccc
Q 045250          101 EVYHFDRTM--SLIGMRYLEP-PHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSL  154 (165)
Q Consensus       101 ~v~~~D~e~--~~~vMEdl~~-~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd  154 (165)
                      ++|+.+.+.  .++|||||.. ++... ..  .......-++.+-+.||++|..+-.
T Consensus        80 ~~~~~~~~~~~~~lvlEDL~~~g~~~~-~~--~~~l~~~~~~~~l~~LA~fHA~s~~  133 (294)
T PF02958_consen   80 KCYYADEDPGDEVLVLEDLSEKGYRMG-DR--RDGLDLEHAELVLKKLAKFHAASWA  133 (294)
T ss_pred             eEEEeccCCCceeeehhhhhhcCCccc-cc--ccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999988664  5999999985 33322 11  1124567789999999999998754

All known members of this group are proteins from drosophila and Caenorhabditis elegans.

>PRK06148 hypothetical protein; Provisional

Probab=97.63  E-value=0.0014  Score=63.76  Aligned_cols=128  Identities=13%  Similarity=0.158  Sum_probs=88.4

Q ss_pred             ccCHhhHHHHHHhCCCcccccCCCCCcceeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHH
Q 045250            8 PLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEAL   86 (165)
Q Consensus         8 ~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~   86 (165)
                      .++.+.+.+-+.++=      +..   -++++|++. -|.+|+|+.++| .+|+|...|--         +......|.+
T Consensus        10 ~~s~~~~~~~~~~~y------gl~---~~~~~L~s~-~d~nf~v~~~~g~~yVLKi~~~~~---------~~~~~~~q~~   70 (1013)
T PRK06148         10 EFTTKDAEALLAQHF------GIS---ATATPLDGE-RDLNFRLTTDDGADYILKIVNPSE---------PRVESDFQTA   70 (1013)
T ss_pred             CCCHHHHHHHHHHHc------CCc---eEEeecCCc-CCceEEEEeCCCCeEEEEEcCCcc---------chhHHHHHHH
Confidence            478888888888752      111   256888665 499999998888 99999988631         2235556677


Q ss_pred             HHHHhhccCCC-CCceEEEEcC----------C---CceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250           87 ALKEHGKLCPD-HVPEVYHFDR----------T---MSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus        87 ~L~~~~~~~p~-~vP~v~~~D~----------e---~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      +|..+.+..|. .||+++.-..          +   ..+-+|++++  +..|.+.   ....+....++|++||++|..+
T Consensus        71 ~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~G~~~~vrLl~~l~--G~~l~~~---~~~t~~~~~~lG~~larlh~al  145 (1013)
T PRK06148         71 ALDHLAAVAPDLPVPRLIPSLSGASLASAQDPDGEPRLLRLLSWLP--GTPLAEA---APRTEALLDNLGRALGRLDRAL  145 (1013)
T ss_pred             HHHHHHhhCCCCCcCeeeecCCCCeEEEeecCCCceEEEEEEeccC--CCcHHhc---cCCCHHHHHHHHHHHHHHHHHH
Confidence            88877765333 3666553221          1   2466899998  4555431   3345789999999999999999


Q ss_pred             cccccCc
Q 045250          153 SLLYRTT  159 (165)
Q Consensus       153 sd~~l~~  159 (165)
                      ++|.-+.
T Consensus       146 ~~F~~p~  152 (1013)
T PRK06148        146 QGFMHPG  152 (1013)
T ss_pred             hcCCCCC
Confidence            9987554

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.58  E-value=0.00026  Score=56.18  Aligned_cols=101  Identities=22%  Similarity=0.198  Sum_probs=59.0

Q ss_pred             EEEEEeCCC-eEEEEecCccccc----------c--------CCCC-CCChHHHHHHHHHHHHhhccCCCCCceEEEEcC
Q 045250           48 VYIVVGTSG-SFVIKQALPYVRC----------I--------GESW-PMTKERAYFEALALKEHGKLCPDHVPEVYHFDR  107 (165)
Q Consensus        48 v~rV~~~~g-svIvKqa~p~~r~----------~--------~~~~-~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~  107 (165)
                      ||.+...+| .++||-=+.....          .        ...| .+...|+..|++.|+.+.+. ...||++|.++ 
T Consensus         2 Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~-Gv~vP~p~~~~-   79 (188)
T PF01163_consen    2 VYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEA-GVPVPKPYDYN-   79 (188)
T ss_dssp             EEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCT-T-SS--EEEEE-
T ss_pred             EEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHC-CccCCcEEEEe-
Confidence            677777766 6888865432110          0        0123 45677889999999999885 67799999664 


Q ss_pred             CCceEEEecCCCCchH---HHHHHHcCCCCHHHHHHHHHHHHHH-Hhc
Q 045250          108 TMSLIGMRYLEPPHII---LRKGLIAGIKYPLLAEHMSEFMAKT-LFY  151 (165)
Q Consensus       108 e~~~~vMEdl~~~~~~---lr~~l~~g~~~~~~a~~iG~~La~~-h~~  151 (165)
                       .+++||||+++++..   |++.-........+..++...+..+ |..
T Consensus        80 -~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~  126 (188)
T PF01163_consen   80 -RNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKA  126 (188)
T ss_dssp             -TTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCT
T ss_pred             -CCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhc
Confidence             899999999933333   3333222234456777777755554 443

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>smart00090 RIO RIO-like kinase

Probab=97.56  E-value=0.00077  Score=54.89  Aligned_cols=110  Identities=15%  Similarity=0.027  Sum_probs=73.1

Q ss_pred             EeccCCceeEEEEEE--eCCC-eEEEEecCccccccC--CCCC----------CC-----hHHHHHHHHHHHHhhccCCC
Q 045250           38 KEVGDGNLNFVYIVV--GTSG-SFVIKQALPYVRCIG--ESWP----------MT-----KERAYFEALALKEHGKLCPD   97 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~--~~~g-svIvKqa~p~~r~~~--~~~~----------l~-----~~R~~~E~~~L~~~~~~~p~   97 (165)
                      +.+|.|..--||++.  ..+| .++||...+-.....  ..|.          .+     ..+...|++.|+.+.. ...
T Consensus        34 ~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~-~~i  112 (237)
T smart00090       34 GCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE-AGV  112 (237)
T ss_pred             CeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh-cCC
Confidence            579999999999998  3466 899998775431100  0010          01     1245679999988875 245


Q ss_pred             CCceEEEEcCCCceEEEecCCCCchHHHHHHHc-CCCC----HHHHHHHHHHHHHHHhcc
Q 045250           98 HVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIA-GIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus        98 ~vP~v~~~D~e~~~~vMEdl~~~~~~lr~~l~~-g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .+|+++.+.  .+.+|||+++.  ..+...+.. +...    ..++.+|...|+.+|...
T Consensus       113 ~~p~~~~~~--~~~lV~E~~~g--~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g  168 (237)
T smart00090      113 PVPKPIAWR--RNVLVMEFIGG--DGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEG  168 (237)
T ss_pred             CCCeeeEec--CceEEEEEecC--CcccccccccCCcchHHHHHHHHHHHHHHHHHHhcC
Confidence            679988764  56899999983  233332222 2211    268899999999999877

>PTZ00384 choline kinase; Provisional

Probab=97.52  E-value=0.00058  Score=59.70  Aligned_cols=110  Identities=14%  Similarity=0.096  Sum_probs=74.5

Q ss_pred             CCCcceeEeccCCceeEEEEEEeCCC---eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC
Q 045250           31 KFDDLTIKEVGDGNLNFVYIVVGTSG---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR  107 (165)
Q Consensus        31 ~~~~~~v~~l~~Gn~N~v~rV~~~~g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~  107 (165)
                      +.+.+++++++||-.|.+|+|+..++   ...+|.-+  +|+.|..-.+-.+| ..|.++++.+++  -+..|++|+.++
T Consensus        49 ~~~~i~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl--~R~~g~~~~l~IdR-~~E~~i~~~Ls~--~glgP~l~~~f~  123 (383)
T PTZ00384         49 NPEFIEIKKMNNGITNQVYQATLVDGDKDRYPIKSVC--IKKSSTYNSLVIDN-DLQYNIAKLLGD--NNFGPKIIGRFG  123 (383)
T ss_pred             CcccEEEEEeCCcccceEEEEEecCCCCCccccceEE--EEeccCCCceEecc-HHHHHHHHHHHh--CCCCCeEEEecC
Confidence            45678999999999999999986532   22222200  11112222333455 567888888876  367899999996


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250          108 TMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                        +.++.|++.  +..+-..-   -..|.+...|++.||++|...
T Consensus       124 --~g~l~efIe--Gr~l~~~d---l~~p~~~~~IA~~La~lH~~~  161 (383)
T PTZ00384        124 --DFTIQEWVE--GNTMGIDS---LQNLSVLTGIASSLAKFHKRV  161 (383)
T ss_pred             --CEEEEEEec--cccCChhH---hcCHHHHHHHHHHHHHHhccc
Confidence              469999998  33443311   135778999999999999964

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=97.49  E-value=0.0016  Score=51.14  Aligned_cols=109  Identities=15%  Similarity=0.036  Sum_probs=67.9

Q ss_pred             EeccCCceeEEEEEEeCCC-eEEEEecCccccccCCC-------CC------------CChHHHHHHHHHHHHhhccCCC
Q 045250           38 KEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGES-------WP------------MTKERAYFEALALKEHGKLCPD   97 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~-------~~------------l~~~R~~~E~~~L~~~~~~~p~   97 (165)
                      ..||.|..-.||++.+.+| .++||.-.+-......+       -.            +...+...|++.|+.+... ..
T Consensus         3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~v   81 (190)
T cd05147           3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTA-GI   81 (190)
T ss_pred             CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHC-CC
Confidence            3588899999999998777 89999876532110000       00            0112344588888888652 22


Q ss_pred             CCceEEEEcCCCceEEEecCCCCchHHHHHHH-cCCCC----HHHHHHHHHHHHHH-Hhc
Q 045250           98 HVPEVYHFDRTMSLIGMRYLEPPHIILRKGLI-AGIKY----PLLAEHMSEFMAKT-LFY  151 (165)
Q Consensus        98 ~vP~v~~~D~e~~~~vMEdl~~~~~~lr~~l~-~g~~~----~~~a~~iG~~La~~-h~~  151 (165)
                      .+|.++.+  ..+.+||||++ + ..+..... .+...    ..++.+++..|+.+ |..
T Consensus        82 ~~p~~~~~--~~~~iVmE~i~-g-~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~  137 (190)
T cd05147          82 PCPEPILL--KSHVLVMEFIG-D-DGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDC  137 (190)
T ss_pred             CCCcEEEe--cCCEEEEEEeC-C-CCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence            46777654  45689999998 3 34433322 33322    24678888999988 553

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []

Probab=97.48  E-value=0.00043  Score=57.41  Aligned_cols=101  Identities=15%  Similarity=0.056  Sum_probs=77.2

Q ss_pred             eccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecC
Q 045250           39 EVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYL  117 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vMEdl  117 (165)
                      ++.+|..++|+.|...+| ..|+|.+.|.-...         .-..+..+|+.+..   .-+.+++..|++..++.||.+
T Consensus         9 ~~~~g~~s~V~pv~~~dG~~avLKl~~p~~~~~---------~E~~g~~~L~~w~G---~GaVrll~~d~~~~AlLLErl   76 (253)
T PF04655_consen    9 PPAHGSSSLVVPVRRADGTPAVLKLAPPHAEAE---------HEARGEAALRWWNG---RGAVRLLAADPERGALLLERL   76 (253)
T ss_pred             CCCCCcceEEEEEEcCCCCeEEEEecCCcccch---------hhhhHHhHhheeCC---CCceeeeccccccchhhhhhc
Confidence            467999999999999998 89999999877542         11223355776654   234699999999999999999


Q ss_pred             CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccc
Q 045250          118 EPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTS  153 (165)
Q Consensus       118 ~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ts  153 (165)
                      . ....|.+...+|.. ....+.++..+.++|....
T Consensus        77 ~-~g~~L~~~~~~g~d-~~a~~i~a~l~~~L~~~~~  110 (253)
T PF04655_consen   77 D-PGRSLASLPREGDD-DEATRIAAGLLRRLHRPAP  110 (253)
T ss_pred             c-CCCchhhcccccCc-hHHHHHHHHHHHHHhCCCC
Confidence            6 36788775544443 4668889999999999865

Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=97.45  E-value=0.0038  Score=49.74  Aligned_cols=105  Identities=19%  Similarity=0.085  Sum_probs=74.7

Q ss_pred             eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGM  114 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vM  114 (165)
                      -.+.+|.|....||++.+..+ .+++|...+.-        ...++...|.++|+.+..  |..+|-...+......++|
T Consensus        10 ~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~--------~~~~~~~~E~~~l~~l~h--~~i~~~~~~~~~~~~~~v~   79 (260)
T cd05069          10 LDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT--------MMPEAFLQEAQIMKKLRH--DKLVPLYAVVSEEPIYIVT   79 (260)
T ss_pred             eeeeecCcCCCeEEEEEEcCCceEEEEEcccCC--------ccHHHHHHHHHHHHhCCC--CCeeeEEEEEcCCCcEEEE
Confidence            345688888889999988765 78888754321        233677788888887753  6667766677778888999


Q ss_pred             ecCCCCchHHHHHHHcCC--CC-----HHHHHHHHHHHHHHHhcc
Q 045250          115 RYLEPPHIILRKGLIAGI--KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 Edl~~~~~~lr~~l~~g~--~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |+++  ..+|.+.+.+..  ..     -.++.++...|+.+|...
T Consensus        80 e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~  122 (260)
T cd05069          80 EFMG--KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN  122 (260)
T ss_pred             EcCC--CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9998  346777665422  11     357788999999999754

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=97.42  E-value=0.0019  Score=53.38  Aligned_cols=92  Identities=16%  Similarity=0.065  Sum_probs=64.4

Q ss_pred             EEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--------cCCCceEEEecCC
Q 045250           47 FVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--------DRTMSLIGMRYLE  118 (165)
Q Consensus        47 ~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--------D~e~~~~vMEdl~  118 (165)
                      -||+|.+++|+.|+|...           .+.++...|.++++.+.+. ...||+++.-        ..+....+||+++
T Consensus        11 ~v~~v~t~~g~~~LK~~~-----------~~~~~~~~~~~~~~~L~~~-g~~vp~~i~t~~g~~~~~~~~~~~~l~~~i~   78 (313)
T TIGR02906        11 NVYKVETDSGNKCLKKIN-----------YPPERLLFILGAQEHLRKN-GFNIPKILKTKDGELYVKYNGDLYVLTEWIE   78 (313)
T ss_pred             cEEEEEeCCCCeEEEEcC-----------CCHHHHHHHHHHHHHHHHc-CCCCCceeecCCCCEEEEECCEEEEEehhcc
Confidence            499999888899999752           1236778889888888663 1245555532        2345678889998


Q ss_pred             CCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccC
Q 045250          119 PPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRT  158 (165)
Q Consensus       119 ~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~  158 (165)
                      +  ..+-      ...+..+.++|+.||++|..+.++..+
T Consensus        79 G--~~~~------~~~~~~~~~~g~~La~lH~~~~~~~~~  110 (313)
T TIGR02906        79 G--RECD------FNNPIDLKKAAKGLALFHHASKGYVPP  110 (313)
T ss_pred             C--cCCC------CCCHHHHHHHHHHHHHHHHhCCCCCCC
Confidence            3  2221      123567899999999999999988544

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>cd05119 RIO RIO kinase family, catalytic domain

Probab=97.34  E-value=0.0033  Score=47.94  Aligned_cols=109  Identities=17%  Similarity=0.119  Sum_probs=69.0

Q ss_pred             EeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCC-----------------CCChHHHHHHHHHHHHhhccCCCCC
Q 045250           38 KEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESW-----------------PMTKERAYFEALALKEHGKLCPDHV   99 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~-----------------~l~~~R~~~E~~~L~~~~~~~p~~v   99 (165)
                      ..+|.|+...||++.+.+| .++||.-.+-.......+                 .+....+..|.+.+..+... ...+
T Consensus         3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~-~~~~   81 (187)
T cd05119           3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEA-GVPV   81 (187)
T ss_pred             cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHc-CCCC
Confidence            4688999999999998866 899997554322110001                 11122334566666666553 3468


Q ss_pred             ceEEEEcCCCceEEEecCCCCc---hHHHHHHHcCCCCHHHHHHHHHHHHHHHh
Q 045250          100 PEVYHFDRTMSLIGMRYLEPPH---IILRKGLIAGIKYPLLAEHMSEFMAKTLF  150 (165)
Q Consensus       100 P~v~~~D~e~~~~vMEdl~~~~---~~lr~~l~~g~~~~~~a~~iG~~La~~h~  150 (165)
                      |+++.++  ...++||+++.+.   ..+...... ...-.++.++...+..+|.
T Consensus        82 ~~~~~~~--~~~lv~e~~~g~~~~~~~l~~~~~~-~~~~~~~~~~~~~l~~lh~  132 (187)
T cd05119          82 PKPIDLN--RHVLVMEFIGGDGIPAPRLKDVRLL-EDPEELYDQILELMRKLYR  132 (187)
T ss_pred             CceEecC--CCEEEEEEeCCCCccChhhhhhhhc-ccHHHHHHHHHHHHHHHhh
Confidence            8888664  5799999998311   345443322 2234688889999999997

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PTZ00296 choline kinase; Provisional

Probab=97.30  E-value=0.0019  Score=57.55  Aligned_cols=105  Identities=15%  Similarity=0.079  Sum_probs=75.3

Q ss_pred             CCCcceeEeccCCceeEEEEEEeCCC----------eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCc
Q 045250           31 KFDDLTIKEVGDGNLNFVYIVVGTSG----------SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVP  100 (165)
Q Consensus        31 ~~~~~~v~~l~~Gn~N~v~rV~~~~g----------svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP  100 (165)
                      +.+++++++++||-.|.+|+|+..++          +++++.-       |++-..-.+| ..|..+++.+++.  +..|
T Consensus       104 ~~~~I~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiy-------G~~te~lIdR-~~E~~v~~~ls~~--gi~P  173 (442)
T PTZ00296        104 TEDDVRVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIY-------GKDVDELYNP-ISEFEVYKTMSKY--RIAP  173 (442)
T ss_pred             CcccEEEEEecCcccCceEEEEecCCCCccccCcCceEEEEec-------CCCccceeCH-HHHHHHHHHHHHC--CCCC
Confidence            44578999999999999999986532          4555443       3332222355 5688899888874  6788


Q ss_pred             eEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250          101 EVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       101 ~v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      ++|..  .....|.|++. + ..|+..=+   ..|...+.|+..|+++|...
T Consensus       174 ~l~~~--f~gg~I~efi~-g-~~l~~~dl---~~~~~~~~iA~~L~~lH~~~  218 (442)
T PTZ00296        174 QLLNT--FSGGRIEEWLY-G-DPLRIDDL---KNPSILIGIANVLGKFHTLS  218 (442)
T ss_pred             ceEEE--eCCCEEEEeeC-C-ccCCHHHc---CCHHHHHHHHHHHHHHhccc
Confidence            88854  45788899998 3 55554222   34678999999999999875

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=97.24  E-value=0.00083  Score=53.76  Aligned_cols=66  Identities=15%  Similarity=0.066  Sum_probs=46.0

Q ss_pred             HHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCC---chHHHHHHHcCCCCHHHHHHHHHHHHHH-Hhc
Q 045250           83 FEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPP---HIILRKGLIAGIKYPLLAEHMSEFMAKT-LFY  151 (165)
Q Consensus        83 ~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vMEdl~~~---~~~lr~~l~~g~~~~~~a~~iG~~La~~-h~~  151 (165)
                      .|++.|+.+.+. ...||+++.+  ..+++||||++++   ...|++....-.....+..+++..|+++ |..
T Consensus        75 kE~r~L~rl~~~-Gv~vP~pi~~--~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~  144 (197)
T cd05146          75 KEMHNLKRMQKA-GIPCPEVVVL--KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKEC  144 (197)
T ss_pred             HHHHHHHHHHHc-CCCCCeEEEe--cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhC
Confidence            577789888885 6789999966  7899999999842   2345543322111235668888888888 554

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=97.14  E-value=0.01  Score=47.10  Aligned_cols=105  Identities=20%  Similarity=0.114  Sum_probs=72.8

Q ss_pred             eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGM  114 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vM  114 (165)
                      -++.+|.|....||++...++ .+++|.-.+..        ...++...|..+|+.+..  |..++-.-.+..+...++|
T Consensus        10 ~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~--------~~~~~~~~E~~~l~~l~~--~~i~~~~~~~~~~~~~lv~   79 (260)
T cd05070          10 LIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGT--------MSPESFLEEAQIMKKLRH--DKLVQLYAVVSEEPIYIVT   79 (260)
T ss_pred             hhheeccccCceEEEEEecCCceeEEEEecCCC--------CCHHHHHHHHHHHHhcCC--CceEEEEeEECCCCcEEEE
Confidence            356788898899999988766 78888755421        123567788888887753  4444444445666778999


Q ss_pred             ecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 045250          115 RYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 Edl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t  152 (165)
                      |+++  ...|.+.+.+..   ..    -.++.++...|+-+|...
T Consensus        80 e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~  122 (260)
T cd05070          80 EYMS--KGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN  122 (260)
T ss_pred             EecC--CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9998  357777765422   11    357778888888888764

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>PRK06149 hypothetical protein; Provisional

Probab=97.12  E-value=0.0096  Score=57.75  Aligned_cols=128  Identities=16%  Similarity=0.136  Sum_probs=85.9

Q ss_pred             ccCHhhHHHHHHhCCCcccccCCCCCcceeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHH
Q 045250            8 PLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALA   87 (165)
Q Consensus         8 ~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~   87 (165)
                      .++.+++...|.++--+      +   -++.+++ |.-|.+|+|+.+++++|+|...|..         +......|..+
T Consensus        16 ~ls~~~~~~ll~~~ygl------~---~~~~~L~-s~~d~nf~v~t~~~~yVLKi~~~~~---------~~~~l~~e~~~   76 (972)
T PRK06149         16 DVSEAQAERILAEHYGL------S---GTLTELG-SQQDRNFRVDSDGGRFVLKICHAAY---------AAVELEAQHAA   76 (972)
T ss_pred             CCCHHHHHHHHHHhcCC------c---eEEEecC-CcCcceEEEEecCCcEEEEeCCccC---------ChHHHHHHHHH
Confidence            48889999999764211      1   2467774 5557889999887799999988622         22467788889


Q ss_pred             HHHhhccCCC-CCceEEEEcC------------CCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccc
Q 045250           88 LKEHGKLCPD-HVPEVYHFDR------------TMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSL  154 (165)
Q Consensus        88 L~~~~~~~p~-~vP~v~~~D~------------e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd  154 (165)
                      |+.+.+-.|. .||+++---.            ...+-+++|++  +..+.+   .....+..+.++|+++|++|..++|
T Consensus        77 l~hL~~~~~glpvp~pi~t~~G~~~~~~~~~g~~~~vrL~~~l~--G~~~~~---~~~~~~~~~~~lG~~lArlh~al~~  151 (972)
T PRK06149         77 LRHLAEREPALRVPVVIPALDGEELLTLDVRGQGLRVRLLDYLP--GQPLTR---LGHLAPASVAGLGALCARVARALAD  151 (972)
T ss_pred             HHHHHhhCCCCCCceeeECCCCCeEEEEecCCceEEEEEEEecC--Cccccc---cCCCCHHHHHHHHHHHHHHHHHHcC
Confidence            9888765322 3454442111            22467888898  333322   1234578899999999999999999


Q ss_pred             cccCc
Q 045250          155 LYRTT  159 (165)
Q Consensus       155 ~~l~~  159 (165)
                      |.-+.
T Consensus       152 f~hp~  156 (972)
T PRK06149        152 FDHPG  156 (972)
T ss_pred             CCCCC
Confidence            97543

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=97.07  E-value=0.017  Score=46.23  Aligned_cols=105  Identities=18%  Similarity=0.062  Sum_probs=72.2

Q ss_pred             eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGM  114 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vM  114 (165)
                      -.+.+|.|...-||++.+.++ .+.||...+..        ...++...|.++|+.+..  |..++-.-.+..+...+||
T Consensus        10 ~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~--------~~~~~~~~E~~~l~~l~~--~~i~~~~~~~~~~~~~lv~   79 (262)
T cd05071          10 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--------MSPEAFLQEAQVMKKLRH--EKLVQLYAVVSEEPIYIVT   79 (262)
T ss_pred             EeeecCCCCCCcEEEEEecCCceEEEEecccCc--------cCHHHHHHHHHHHHhCCC--CCcceEEEEECCCCcEEEE
Confidence            355688888889999987655 78888865311        234577788888888753  5444444445667778999


Q ss_pred             ecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhcc
Q 045250          115 RYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 Edl~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |+++  ..+|++.+.+.  ...     ..++.++...|+.+|...
T Consensus        80 e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~  122 (262)
T cd05071          80 EYMS--KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN  122 (262)
T ss_pred             EcCC--CCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9998  34677777642  211     357788888999998754

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=97.06  E-value=0.0071  Score=47.05  Aligned_cols=110  Identities=18%  Similarity=0.142  Sum_probs=71.1

Q ss_pred             eEeccCCceeEEEEEEeCCC-eEEEEecCcccccc--------------CCCC-CCChHHHHHHHHHHHHhhccCCCCCc
Q 045250           37 IKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCI--------------GESW-PMTKERAYFEALALKEHGKLCPDHVP  100 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~--------------~~~~-~l~~~R~~~E~~~L~~~~~~~p~~vP  100 (165)
                      .+.++.|....||++...+| .++||...+-....              -.+| .....+...|..++..+... ...+|
T Consensus        20 ~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~v~   98 (198)
T cd05144          20 GNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEE-GFPVP   98 (198)
T ss_pred             CCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHc-CCCCC
Confidence            46799999999999998767 89999743211000              0111 11223456677788777553 23678


Q ss_pred             eEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250          101 EVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       101 ~v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      .++.  .....++||+++  +..|..... ......++.++...+..+|...
T Consensus        99 ~~~~--~~~~~lv~e~~~--g~~L~~~~~-~~~~~~~~~~i~~~l~~lh~~g  145 (198)
T cd05144          99 KPID--WNRHAVVMEYID--GVELYRVRV-LEDPEEVLDEILEEIVKAYKHG  145 (198)
T ss_pred             ceee--cCCceEEEEEeC--Ccchhhccc-cccHHHHHHHHHHHHHHHHHCC
Confidence            8774  456789999998  345544322 1234578899999999999753

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=96.95  E-value=0.02  Score=45.37  Aligned_cols=103  Identities=14%  Similarity=0.060  Sum_probs=69.9

Q ss_pred             eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--E-cCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--F-DRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~-D~e~~~~  112 (165)
                      -.+.+|.|....||++...+..+++|.....         ....+...|+..|+.+..  |..++ ++.  + +.....+
T Consensus        10 ~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~---------~~~~~~~~e~~~l~~l~~--~~i~~-~~~~~~~~~~~~~l   77 (256)
T cd05082          10 LLQTIGKGEFGDVMLGDYRGNKVAVKCIKND---------ATAQAFLAEASVMTQLRH--SNLVQ-LLGVIVEEKGGLYI   77 (256)
T ss_pred             eeeeecccCCCeEEEEEEcCCcEEEEEeCCC---------chHHHHHHHHHHHHhCCC--CCeee-EEEEEEcCCCceEE
Confidence            3577899988999999877558898975321         224567788888887743  44344 332  2 3345679


Q ss_pred             EEecCCCCchHHHHHHHcCCC--C-----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIK--Y-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~--~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +||+++  ...|.+.+.+...  .     -.++.+|...|+-+|...
T Consensus        78 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  122 (256)
T cd05082          78 VTEYMA--KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN  122 (256)
T ss_pred             EEECCC--CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999998  3477777665321  1     256778899999999765

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>PRK12274 serine/threonine protein kinase; Provisional

Probab=96.90  E-value=0.01  Score=48.32  Aligned_cols=103  Identities=16%  Similarity=0.165  Sum_probs=69.3

Q ss_pred             eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCC---CCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESW---PMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~---~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~  112 (165)
                      .++.++-|...-|+.+..++.+++.    +-+.  +..|   .+...|...|+++|+.+..  +..+|+++.+  ..+.+
T Consensus         6 ~~~~l~~~~f~~v~~~~~~~~k~~~----~~l~--~~~~~~~~~~~~l~~rE~~iL~~L~~--~~~vP~ll~~--~~~~l   75 (218)
T PRK12274          6 VNEPLKSDTFGRILLVRGGERKFVR----RDLS--AAPWWLRGVAWWLARREALALRQLDG--LPRTPRLLHW--DGRHL   75 (218)
T ss_pred             cceeecCCCcceEEEeecCCceeee----cccc--cchhhhhhHHHHHHHHHHHHHHhcCC--CCCCCEEEEE--cCEEE
Confidence            4566777777788877775446552    1222  1223   2223467889999998865  3678999977  56899


Q ss_pred             EEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+.  +..|.+.+..+  ...+..++...|..+|...
T Consensus        76 vmeyI~--G~~L~~~~~~~--~~~~~~qi~~~L~~lH~~G  111 (218)
T PRK12274         76 DRSYLA--GAAMYQRPPRG--DLAYFRAARRLLQQLHRCG  111 (218)
T ss_pred             EEeeec--CccHHhhhhhh--hHHHHHHHHHHHHHHHHCc
Confidence            999997  45666544333  2356788888999999764

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=96.88  E-value=0.025  Score=41.86  Aligned_cols=101  Identities=18%  Similarity=0.109  Sum_probs=73.0

Q ss_pred             ccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC--CceEEEe
Q 045250           40 VGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRT--MSLIGMR  115 (165)
Q Consensus        40 l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e--~~~~vME  115 (165)
                      +|.|..+-||++...+ | .++||...+...      ....++...|.+.|+.+..   ..+|+++.+...  ...++||
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~------~~~~~~~~~e~~~~~~l~~---~~i~~~~~~~~~~~~~~~~~e   71 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDS------SSLLEELLREIEILKKLNH---PNIVKLYGVFEDENHLYLVME   71 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccc------hhHHHHHHHHHHHHHhcCC---CCeeeEeeeeecCCeEEEEEe
Confidence            5788889999999874 4 899998664332      1145678888888887765   466666655554  8899999


Q ss_pred             cCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhc
Q 045250          116 YLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       116 dl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~  151 (165)
                      +++  ...|.+.+...  ...    -.++.++...|+.+|..
T Consensus        72 ~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~  111 (215)
T cd00180          72 YCE--GGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSN  111 (215)
T ss_pred             cCC--CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            998  35777777654  232    25778888888888876

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>PRK09188 serine/threonine protein kinase; Provisional

Probab=96.88  E-value=0.014  Score=50.84  Aligned_cols=106  Identities=14%  Similarity=-0.003  Sum_probs=71.9

Q ss_pred             eeEeccCCceeEEEEEEeC--CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGT--SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~--~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~  112 (165)
                      -...||.|..-.||++...  +| .+.||.-.+....  .......++...|+++|+.+..  |..+|.++.+  ....+
T Consensus        22 ~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~--~~~~~~~~~~~~E~~iL~~L~h--~~iv~~l~~~--~~~~L   95 (365)
T PRK09188         22 ETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPW--WSKPLARHLAAREIRALKTVRG--IGVVPQLLAT--GKDGL   95 (365)
T ss_pred             EccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccc--cccHHHHHHHHHHHHHHHhccC--CCCCcEEEEc--CCcEE
Confidence            5567899999999999764  35 4577765422110  0012234668889999988864  5678888754  56899


Q ss_pred             EEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~  151 (165)
                      ||||++  +..|.. + .......+..++...|+.+|..
T Consensus        96 VmE~~~--G~~L~~-~-~~~~~~~~~~~i~~aL~~lH~~  130 (365)
T PRK09188         96 VRGWTE--GVPLHL-A-RPHGDPAWFRSAHRALRDLHRA  130 (365)
T ss_pred             EEEccC--CCCHHH-h-CccchHHHHHHHHHHHHHHHHC
Confidence            999997  345642 2 2112257888999999999975

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=96.87  E-value=0.016  Score=48.09  Aligned_cols=108  Identities=16%  Similarity=0.055  Sum_probs=72.7

Q ss_pred             eEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~  112 (165)
                      +..||.|....||++.+.+ + .++||.-..-....    .-..++...|.+.|+....  |..++.++.  .+.+...+
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~----~~~~~~~~~e~~~l~~~~~--~~~i~~~~~~~~~~~~~~l   78 (324)
T cd05587           5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQ----DDDVECTMVEKRVLALPGK--PPFLTQLHSCFQTMDRLYF   78 (324)
T ss_pred             EEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhh----hhHHHHHHHHHHHHHhcCC--CCceeeeEEEEEcCCEEEE
Confidence            5678999999999998763 4 78999755322110    1234567778887766543  455666543  45677889


Q ss_pred             EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||||++  +..|.+.+.....+     ..++.+|...|+-+|...
T Consensus        79 v~E~~~--~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  121 (324)
T cd05587          79 VMEYVN--GGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKG  121 (324)
T ss_pred             EEcCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999998  34777777654432     235677888888888754

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=96.87  E-value=0.022  Score=45.46  Aligned_cols=104  Identities=18%  Similarity=0.015  Sum_probs=70.4

Q ss_pred             eccCCceeEEEEEEeC---CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 045250           39 EVGDGNLNFVYIVVGT---SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGM  114 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~---~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vM  114 (165)
                      ++|.|....||++...   ++ .+++|...+...      ....++...|+.+|+.+..  |..++-+-.+..+...+||
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~ii~~~~~~~~~~~~lv~   73 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENE------KSVRDEMMREAEIMHQLDN--PYIVRMIGVCEAEALMLVM   73 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccC------hHHHHHHHHHHHHHHhcCC--CCeEEEEEEEcCCCeEEEE
Confidence            4788999999998653   33 688887654321      2234677889899987743  4444444455667788999


Q ss_pred             ecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 045250          115 RYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 Edl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      |+++  ..+|.+.+...  ...    -.++.+|...|+.+|...
T Consensus        74 e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  115 (257)
T cd05115          74 EMAS--GGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKN  115 (257)
T ss_pred             EeCC--CCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence            9998  35777777542  222    256788888899988764

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=96.85  E-value=0.012  Score=50.01  Aligned_cols=108  Identities=19%  Similarity=0.143  Sum_probs=71.3

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      .++.||.|....||++.+. +| .+.||.-...-..    ..-...+...|.++|+.+..  | ++++++.  .+.....
T Consensus         5 ~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~~E~~il~~l~h--p-~iv~~~~~~~~~~~~~   77 (377)
T cd05629           5 TVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMF----KKDQLAHVKAERDVLAESDS--P-WVVSLYYSFQDAQYLY   77 (377)
T ss_pred             EeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHH----HhHHHHHHHHHHHHHHhCCC--C-CcceEEEEEEcCCeeE
Confidence            3678999999999999875 45 7888975421110    11223566778888776542  3 4555543  3566788


Q ss_pred             EEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  +..|.+.+.....++     .++.++...|..+|...
T Consensus        78 lv~E~~~--gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~g  121 (377)
T cd05629          78 LIMEFLP--GGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLG  121 (377)
T ss_pred             EEEeCCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999997  347777776655432     25667888888888753

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=96.82  E-value=0.021  Score=45.16  Aligned_cols=105  Identities=14%  Similarity=-0.024  Sum_probs=73.9

Q ss_pred             eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEEE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIGM  114 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~vM  114 (165)
                      -.+.+|.|....||++...++.++||+......        ...+...|..+|+.+..  |..++-+ +.++.....+||
T Consensus        10 ~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~--------~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~~v~   79 (256)
T cd05039          10 LGATIGKGEFGDVMLGDYRGQKVAVKCLKDDST--------AAQAFLAEASVMTTLRH--PNLVQLLGVVLQGNPLYIVT   79 (256)
T ss_pred             ceeeeecCCCceEEEEEecCcEEEEEEeccchh--------HHHHHHHHHHHHHhcCC--cceeeeEEEEcCCCCeEEEE
Confidence            356788999899999998755999998752211        45788888888887753  3333222 345678888999


Q ss_pred             ecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 045250          115 RYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 Edl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t  152 (165)
                      |+++  ...|.+.+....   ..    -.++.++...|+-+|...
T Consensus        80 e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~  122 (256)
T cd05039          80 EYMA--KGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN  122 (256)
T ss_pred             EecC--CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9998  347777776543   11    257788888888888765

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=96.81  E-value=0.021  Score=47.38  Aligned_cols=110  Identities=11%  Similarity=-0.003  Sum_probs=73.9

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~  112 (165)
                      +..+|.|....||++.+. +| .++||......... .   -..++...|.+.++....+--..+.+++.  .+.+...+
T Consensus         4 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~---~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~l   79 (324)
T cd05589           4 LAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIA-R---DEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCF   79 (324)
T ss_pred             EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhh-h---hHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEE
Confidence            567899999999999875 45 79999865432111 1   23467778888887766543334444443  46677899


Q ss_pred             EEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      ||||++ + ..|...+..+....    .++.+|...|+-+|...
T Consensus        80 v~E~~~-~-~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~  121 (324)
T cd05589          80 VMEYAA-G-GDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENK  121 (324)
T ss_pred             EEcCCC-C-CcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999998 3 46766665554332    46778888888888654

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=96.77  E-value=0.021  Score=47.38  Aligned_cols=106  Identities=14%  Similarity=0.053  Sum_probs=70.4

Q ss_pred             eccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEE
Q 045250           39 EVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLIGM  114 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~vM  114 (165)
                      .||.|....||++... +| .++||.-.......    .-..++...|.++|+..... | ++++++.  .+.+...+||
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~il~~~~~h-p-~i~~~~~~~~~~~~~~lv~   75 (321)
T cd05591           2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQ----DDDVDCTMTEKRILALAAKH-P-FLTALHCCFQTKDRLFFVM   75 (321)
T ss_pred             ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhh----hhHHHHHHHHHHHHHhccCC-C-CccceeeEEEcCCeEEEEE
Confidence            4788888999999876 34 78999865432211    12345667788888765442 3 4444443  3667788999


Q ss_pred             ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 Edl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |+++  ...|...+.+...+     ..++.+|...|.-+|...
T Consensus        76 E~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  116 (321)
T cd05591          76 EYVN--GGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHG  116 (321)
T ss_pred             eCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9998  34777777655433     246778888899999753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=96.77  E-value=0.031  Score=44.46  Aligned_cols=105  Identities=18%  Similarity=0.075  Sum_probs=71.6

Q ss_pred             eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGM  114 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vM  114 (165)
                      -.+.+|.|....||++...++ .+++|.-.+-        ....++...|.++|+.+..  |..++-...+......++|
T Consensus        10 ~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~--------~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~v~   79 (260)
T cd05073          10 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG--------SMSVEAFLAEANVMKTLQH--DKLVKLHAVVTKEPIYIIT   79 (260)
T ss_pred             EEeEecCccceEEEEEEecCCccEEEEecCCC--------hhHHHHHHHHHHHHHhcCC--CCcceEEEEEcCCCeEEEE
Confidence            567899999999999987665 6777754321        1234677788888887753  5544444444447789999


Q ss_pred             ecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhcc
Q 045250          115 RYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 Edl~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |+++ + ..|.+.+...  ...     -.++.+|...|+-+|...
T Consensus        80 e~~~-~-~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~  122 (260)
T cd05073          80 EFMA-K-GSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN  122 (260)
T ss_pred             EeCC-C-CcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9998 3 4677776542  211     246778999999998654

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=96.76  E-value=0.0084  Score=53.17  Aligned_cols=116  Identities=22%  Similarity=0.231  Sum_probs=74.4

Q ss_pred             cceeEeccCCceeEEEEEEeCCC-eEEEEecCccccc-cC-----------------CCC-CCChH--------------
Q 045250           34 DLTIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRC-IG-----------------ESW-PMTKE--------------   79 (165)
Q Consensus        34 ~~~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~-~~-----------------~~~-~l~~~--------------   79 (165)
                      ...-++++.|.+.-|||.++.+| .|+||.-.|-++. ..                 +.. .++..              
T Consensus       119 ~fd~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El  198 (437)
T TIGR01982       119 EFEEKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRREL  198 (437)
T ss_pred             hCCCcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHH
Confidence            34557899999999999999888 8999999887521 00                 100 01111              


Q ss_pred             HHHHHHHHHHHhhccC----CCCCceEEEEcCCCceEEEecCCCCchHHHHHHH---cCCCCHHHHHHHHH-HHHHHHhc
Q 045250           80 RAYFEALALKEHGKLC----PDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLI---AGIKYPLLAEHMSE-FMAKTLFY  151 (165)
Q Consensus        80 R~~~E~~~L~~~~~~~----p~~vP~v~~~D~e~~~~vMEdl~~~~~~lr~~l~---~g~~~~~~a~~iG~-~La~~h~~  151 (165)
                      ....|++.+..+++..    .-.+|++|.--....++||||++  +..+.+.+.   .+.....++..+.. ++..+|..
T Consensus       199 df~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~--G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~  276 (437)
T TIGR01982       199 DLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWID--GIPLSDIAALDEAGLDRKALAENLARSFLNQVLRD  276 (437)
T ss_pred             CHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeEC--CcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHhC
Confidence            2345777777776543    23689999665677899999998  344444332   12222457776655 56777653

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=96.72  E-value=0.047  Score=43.15  Aligned_cols=104  Identities=18%  Similarity=0.088  Sum_probs=69.2

Q ss_pred             eEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEEE
Q 045250           37 IKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIGM  114 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~vM  114 (165)
                      .+.+|.|....||++...++ .+++|.....        ....+....|.++|+.+..  |..++-. ++.+.+...++|
T Consensus         9 ~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~--------~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~iv~   78 (256)
T cd05114           9 MKELGSGQFGVVHLGKWRAQIKVAIKAINEG--------AMSEEDFIEEAKVMMKLSH--PKLVQLYGVCTQQKPLYIVT   78 (256)
T ss_pred             eeEecCCcCceEEEEEeccCceEEEEecccC--------CccHHHHHHHHHHHHHCCC--CCceeEEEEEccCCCEEEEE
Confidence            56799999999999988766 7888864311        2334567778888888753  4444433 234455677999


Q ss_pred             ecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 045250          115 RYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 Edl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||++  ...|.+.+...  ...    -.++.++...|+-+|...
T Consensus        79 e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  120 (256)
T cd05114          79 EFME--NGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNS  120 (256)
T ss_pred             EcCC--CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9997  34666666542  222    246777888888888654

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=96.68  E-value=0.035  Score=44.84  Aligned_cols=110  Identities=17%  Similarity=0.153  Sum_probs=69.8

Q ss_pred             eEeccCCceeEEEEEEeC----CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCC-c
Q 045250           37 IKEVGDGNLNFVYIVVGT----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTM-S  110 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~-~  110 (165)
                      .+.+|.|....||+|...    +| .+++|.-..-..   .......++...|..+|+.+... |..++-...|..+. .
T Consensus         5 ~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~---~~~~~~~~~~~~e~~~l~~l~~~-~~i~~~~~~~~~~~~~   80 (290)
T cd05613           5 LKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATI---VQKAKTTEHTRTERQVLEHIRQS-PFLVTLHYAFQTDTKL   80 (290)
T ss_pred             eeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhh---hhcchHHHHHHHHHHHHHhcccC-CChhceeeEeecCCeE
Confidence            467899999999999873    45 788887432111   11223446777888888877543 44444333443343 4


Q ss_pred             eEEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          111 LIGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      .+|||+++  ...|.+.+...... .    .++.+|...|+-+|...
T Consensus        81 ~lv~e~~~--~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~  125 (290)
T cd05613          81 HLILDYIN--GGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLG  125 (290)
T ss_pred             EEEEecCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            59999998  34677777654432 2    34557888888888754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=96.67  E-value=0.026  Score=47.47  Aligned_cols=108  Identities=18%  Similarity=0.153  Sum_probs=72.0

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      -++.||.|...-||++.+. +| .++||.-..-- ...   .-...+...|.++|+.+..  |. +++++  +.+.+...
T Consensus         5 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~---~~~~~~~~~E~~il~~l~h--~~-iv~~~~~~~~~~~~~   77 (364)
T cd05599           5 SIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSE-MLE---KEQVAHVRAERDILAEADN--PW-VVKLYYSFQDENYLY   77 (364)
T ss_pred             EEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHH-hhh---hhHHHHHHHHHHHHHhCCC--CC-CcceEEEEEcCCeEE
Confidence            3678999999999999886 45 78889764211 000   1123455678888887752  33 33443  34777788


Q ss_pred             EEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  +..|.+.+..+..++     .++.+|...|.-+|...
T Consensus        78 lv~E~~~--~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~  121 (364)
T cd05599          78 LIMEYLP--GGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLG  121 (364)
T ss_pred             EEECCCC--CcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  357888777655432     35677888888888653

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=96.66  E-value=0.024  Score=47.19  Aligned_cols=108  Identities=16%  Similarity=0.049  Sum_probs=71.4

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~  112 (165)
                      ...||.|....||++... +| .+.||.-..-...    ..-...+...|.++++....  +..++.++.  .+.+...+
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~~e~~~l~~~~~--~~~i~~~~~~~~~~~~~~l   78 (323)
T cd05615           5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVI----QDDDVECTMVEKRVLALQDK--PPFLTQLHSCFQTVDRLYF   78 (323)
T ss_pred             EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhh----hhhHHHHHHHHHHHHHhccC--CCchhheeeEEecCCEEEE
Confidence            467899999999999875 45 7889975432211    11234566778777765543  445555543  35566789


Q ss_pred             EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||||++  +..|.+.+.....+     ..++.+|...|+-+|...
T Consensus        79 v~Ey~~--~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~  121 (323)
T cd05615          79 VMEYVN--GGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRG  121 (323)
T ss_pred             EEcCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999998  34676666554332     246778888899999754

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=96.64  E-value=0.068  Score=43.04  Aligned_cols=108  Identities=12%  Similarity=0.023  Sum_probs=69.9

Q ss_pred             eEeccCCceeEEEEEEeC--CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-------c
Q 045250           37 IKEVGDGNLNFVYIVVGT--SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-------D  106 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~--~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-------D  106 (165)
                      ++.+|.|....||++.+.  +| .++||........  .+.   ..+...|.+.|+.+..+.-.++++++.+       +
T Consensus         6 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~--~~~---~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~   80 (290)
T cd07862           6 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE--EGM---PLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             eeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCC--CCc---hHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence            567999999999999873  34 6888865433221  111   2345568888888776543456666643       2


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .....+|||+++.   +|.+.+....   ..    -.++.+|...|+-+|...
T Consensus        81 ~~~~~lv~e~~~~---~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~  130 (290)
T cd07862          81 ETKLTLVFEHVDQ---DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR  130 (290)
T ss_pred             CCcEEEEEccCCC---CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3456799999972   4555554321   21    257888899999999754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=96.62  E-value=0.026  Score=44.82  Aligned_cols=110  Identities=15%  Similarity=-0.006  Sum_probs=69.7

Q ss_pred             eEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEE
Q 045250           37 IKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~v  113 (165)
                      ...+|.|...-||++.+.+| .++||+-....... ..-.-...+...|.+.|+.+..  | .+++++.  .+.....++
T Consensus         5 ~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~-~~~~~~~~~~~~e~~~l~~l~~--~-~i~~~~~~~~~~~~~~lv   80 (265)
T cd06631           5 GEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNV-LAAEKEYEKLQEEVDLLKSLKH--V-NIVQYLGTCLDDNTISIF   80 (265)
T ss_pred             cceEeccCCeEEEEEEEcCCCeEEEEEeecCccch-hhHHHHHHHHHHHHHHHHhcCC--C-CEeeEeeEeecCCeEEEE
Confidence            35688899999999988777 78999754321100 0000011345567777777653  3 3333443  366778899


Q ss_pred             EecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  ..+|++.+.+... .    ..++.++...|+.+|...
T Consensus        81 ~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  122 (265)
T cd06631          81 MEFVP--GGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNC  122 (265)
T ss_pred             EecCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99998  4578887766332 2    246678888889888754

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=96.62  E-value=0.029  Score=46.59  Aligned_cols=109  Identities=13%  Similarity=0.095  Sum_probs=70.4

Q ss_pred             eEeccCCceeEEEEEEeC----CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCC
Q 045250           37 IKEVGDGNLNFVYIVVGT----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTM  109 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~  109 (165)
                      ++.||.|....||+|...    +| .+.+|........   ......++...|..+|+.+... | .+++++.  .+...
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~~~e~~~l~~l~~~-~-~i~~~~~~~~~~~~   79 (332)
T cd05614           5 LKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALV---QKAKTVEHTRTERNVLEHVRQS-P-FLVTLHYAFQTEAK   79 (332)
T ss_pred             EEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHh---hhhhHHHHHHHHHHHHHhccCC-C-CcccEEEEEecCCE
Confidence            577999999999999863    34 6778865432111   1123456778888888877542 3 3344433  34455


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      ..+||||++  ...|.+.+.++..+ .    .++.+|...|+-+|...
T Consensus        80 ~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  125 (332)
T cd05614          80 LHLILDYVS--GGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLG  125 (332)
T ss_pred             EEEEEeCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            679999998  34666766655433 2    45668888899998653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=96.61  E-value=0.037  Score=46.91  Aligned_cols=108  Identities=16%  Similarity=0.098  Sum_probs=71.5

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      .++.||.|....||++.+. +| .+.||.-...--..    .-...+...|.++|+.+..  | ++++++  +.+.+...
T Consensus         5 ~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~----~~~~~~~~~E~~il~~l~h--~-~iv~~~~~~~~~~~~~   77 (376)
T cd05598           5 KIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLM----RNQAAHVKAERDILAEADN--E-WVVKLYYSFQDKDNLY   77 (376)
T ss_pred             EEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHh----hhhHHHHHHHHHHHHhCCC--C-CcceEEEEEEcCCEEE
Confidence            4778999999999999876 34 78888754221100    1123566678888877643  3 344444  34567778


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  +..|.+.+.+.... .    .++.+|...|+-+|...
T Consensus        78 lv~E~~~--~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~  121 (376)
T cd05598          78 FVMDYIP--GGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMG  121 (376)
T ss_pred             EEEeCCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  45777777665443 2    24667888888888654

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=96.61  E-value=0.05  Score=43.05  Aligned_cols=105  Identities=19%  Similarity=0.089  Sum_probs=71.3

Q ss_pred             eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v  113 (165)
                      -++++|.|...-||++...++ .+++|+-.+-        ....++...|..+|+.+..  |..++-. +..+.+...++
T Consensus        10 ~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~--------~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv   79 (261)
T cd05072          10 LVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPG--------TMSVQAFLEEANLMKTLQH--DKLVRLYAVVTKEEPIYII   79 (261)
T ss_pred             EeeecCCcCCceEEEEEecCCceEEEEEccCC--------chhHHHHHHHHHHHHhCCC--CCeeeEEEEEcCCCCcEEE
Confidence            467899999999999987766 7888874321        1234677788888887642  3333322 34566777899


Q ss_pred             EecCCCCchHHHHHHHc--CCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIA--GIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~--g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  ..+|++.+..  +...     -.++.++...|+.+|...
T Consensus        80 ~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~  123 (261)
T cd05072          80 TEYMA--KGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN  123 (261)
T ss_pred             EecCC--CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99998  3467776644  2221     246678889999998654

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=96.60  E-value=0.06  Score=43.42  Aligned_cols=107  Identities=13%  Similarity=0.079  Sum_probs=66.4

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCC--
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTM--  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~--  109 (165)
                      ....+|.|....||++.+. +| .++||....-...     .-...+...|.++|+.+... |. +++++.  .+.+.  
T Consensus         5 ~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~-----~~~~~~~~~E~~~l~~l~~~-~~-i~~~~~~~~~~~~~~   77 (295)
T cd07837           5 KLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDE-----EGIPPTALREISLLQMLSES-IY-IVRLLDVEHVEEKNG   77 (295)
T ss_pred             EeeEecccCCeEEEEEEECCCCcEEEEEeehhhccc-----cCCchHHHHHHHHHHHccCC-CC-ccceeeeEeecCCCC
Confidence            3567898998999999876 45 7999975432211     11224566788888877542 33 233332  22222  


Q ss_pred             ---ceEEEecCCCCchHHHHHHHcC-----CCC-----HHHHHHHHHHHHHHHhcc
Q 045250          110 ---SLIGMRYLEPPHIILRKGLIAG-----IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ---~~~vMEdl~~~~~~lr~~l~~g-----~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                         ..++|||++  . .+++.+...     ..+     -.++.+|...|+-+|...
T Consensus        78 ~~~~~lv~e~~~--~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~  130 (295)
T cd07837          78 KPSLYLVFEYLD--S-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG  130 (295)
T ss_pred             CceEEEEeeccC--c-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence               479999998  2 455555431     111     256788888888888654

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=96.59  E-value=0.035  Score=46.16  Aligned_cols=109  Identities=15%  Similarity=0.045  Sum_probs=71.1

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~  112 (165)
                      -++.+|.|....||++.+. +| .++||.-......    ..-...+...|.++|+...  .|..++-. ++.+.+...+
T Consensus         5 ~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~~e~~~l~~~~--h~~iv~~~~~~~~~~~~~l   78 (333)
T cd05600           5 ILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLF----KLNEVRHVLTERDILTTTK--SEWLVKLLYAFQDDEYLYL   78 (333)
T ss_pred             EEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHh----hhhHHHHHHHHHHHHHhCC--CCCCccEEEEEEcCCEEEE
Confidence            3678999999999999886 35 7889976533211    0112345667888887765  24433332 2345566789


Q ss_pred             EEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      ||||++  +..|.+.+...... .    .++.+|...|+.+|...
T Consensus        79 v~e~~~--g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~  121 (333)
T cd05600          79 AMEYVP--GGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELG  121 (333)
T ss_pred             EEeCCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999998  45788877654432 2    35678888888888643

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=96.57  E-value=0.039  Score=45.87  Aligned_cols=106  Identities=17%  Similarity=0.104  Sum_probs=69.3

Q ss_pred             eccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceEEE
Q 045250           39 EVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLIGM  114 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~vM  114 (165)
                      .+|.|....||++.+.+ + .++||.-....... .   -...+...|.++|+..... |. +++++  +.+.+...+||
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~---~~~~~~~~e~~~l~~~~~h-p~-iv~~~~~~~~~~~~~lv~   75 (316)
T cd05619           2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLM-D---DDVECTMVEKRVLSLAWEH-PF-LTHLYCTFQTKENLFFVM   75 (316)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-c---chHHHHHHHHHHHHhccCC-Cc-CcceEEEEEeCCEEEEEE
Confidence            57888888999998763 4 79999866543211 1   2235667788887665332 33 33333  23556677999


Q ss_pred             ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 Edl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||++  +..|...+.+....     ..++.+|...|+-+|...
T Consensus        76 ey~~--~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~  116 (316)
T cd05619          76 EYLN--GGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKG  116 (316)
T ss_pred             eCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9998  34777777654322     246778888888888764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=96.56  E-value=0.064  Score=42.82  Aligned_cols=108  Identities=16%  Similarity=0.089  Sum_probs=71.6

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~  112 (165)
                      ++.+|.|....||++.+. +| .+++|.-.....      .-...+...|...++.+.......+.+++.  .+.....+
T Consensus         6 ~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~------~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l   79 (277)
T cd06917           6 LELIGRGAYGAVYRGKHVPTGRVVALKIINLDTP------DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI   79 (277)
T ss_pred             hhheeccCCceEEEEEEcCCCcEEEEEEecCCCC------chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence            456888999999999875 45 788886432111      123456677888888886533333333443  45566789


Q ss_pred             EEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||++  ...|.+.+..+...    -.++.++...|+-+|...
T Consensus        80 v~e~~~--~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~  121 (277)
T cd06917          80 IMEYAE--GGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVG  121 (277)
T ss_pred             EEecCC--CCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999998  35777777666543    246778888888888755

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=96.54  E-value=0.058  Score=43.29  Aligned_cols=107  Identities=16%  Similarity=0.156  Sum_probs=68.4

Q ss_pred             Ccc-eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE----
Q 045250           33 DDL-TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF----  105 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~----  105 (165)
                      +++ -++.+|.|..+.||++.+. .+ .+++|.-.+...        ..++...|...++.+... | .+++++.+    
T Consensus        18 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~--------~~~~~~~e~~~l~~l~~h-~-~i~~~~~~~~~~   87 (286)
T cd06638          18 DTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD--------IDEEIEAEYNILKALSDH-P-NVVKFYGMYYKK   87 (286)
T ss_pred             cceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc--------hHHHHHHHHHHHHHHhcC-C-Ceeeeeeeeeec
Confidence            344 4578999999999999876 34 788886432211        124566788888777543 3 44555543    


Q ss_pred             ---cCCCceEEEecCCCCchHHHHHHH----cCCCCH-----HHHHHHHHHHHHHHhc
Q 045250          106 ---DRTMSLIGMRYLEPPHIILRKGLI----AGIKYP-----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       106 ---D~e~~~~vMEdl~~~~~~lr~~l~----~g~~~~-----~~a~~iG~~La~~h~~  151 (165)
                         +.+...+||||++  ..+|.+.+.    .+...+     .++.++...|.-+|..
T Consensus        88 ~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~  143 (286)
T cd06638          88 DVKNGDQLWLVLELCN--GGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN  143 (286)
T ss_pred             ccCCCCeEEEEEeecC--CCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC
Confidence               3356799999998  346655443    222222     3777888888888864

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=96.51  E-value=0.04  Score=43.41  Aligned_cols=104  Identities=17%  Similarity=0.106  Sum_probs=67.8

Q ss_pred             EeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceEE
Q 045250           38 KEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLIG  113 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~v  113 (165)
                      +.+|.|....||++.+. +| .+++|.......      .-...+...|.++|+.+..  |. +++++  +.+.....+|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~~~~~~lv   71 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLP------PDLKAKFLQEARILKQYSH--PN-IVRLIGVCTQKQPIYIV   71 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCC------HHHHHHHHHHHHHHHhCCC--CC-cceEEEEEcCCCCeEEE
Confidence            35788888999999875 45 788886542221      1123567778888887642  43 33343  3466667899


Q ss_pred             EecCCCCchHHHHHHHc-CC-CC----HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIA-GI-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~-g~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  ..+|.+.+.. +. ..    -.++.++...|+-+|...
T Consensus        72 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~  114 (252)
T cd05084          72 MELVQ--GGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKH  114 (252)
T ss_pred             Eeecc--CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99998  3477776654 32 22    246778888888888654

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=96.50  E-value=0.033  Score=46.33  Aligned_cols=106  Identities=13%  Similarity=0.027  Sum_probs=68.8

Q ss_pred             eccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEEEe
Q 045250           39 EVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIGMR  115 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~vME  115 (165)
                      .+|.|....||++.+. +| .+++|+-.......    .-...+...|.++|+.+..  |..++-. .+.+.+...+|||
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----~~~~~~~~~E~~~l~~l~h--p~i~~~~~~~~~~~~~~lv~E   75 (323)
T cd05595           2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIA----KDEVAHTVTESRVLQNTRH--PFLTALKYAFQTHDRLCFVME   75 (323)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh----hHHHHHHHHHHHHHHhCCC--CCCcceeeEEecCCEEEEEEe
Confidence            4788999999999875 45 79999876443211    1123455667777776643  4333322 2355667789999


Q ss_pred             cCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          116 YLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       116 dl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |++  ...|...+..+..+     -.++.+|...|+-+|...
T Consensus        76 ~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  115 (323)
T cd05595          76 YAN--GGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD  115 (323)
T ss_pred             CCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            998  34676666655433     246678888888888753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=96.50  E-value=0.031  Score=46.41  Aligned_cols=109  Identities=16%  Similarity=0.053  Sum_probs=69.4

Q ss_pred             eEeccCCceeEEEEEEeC----CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCc
Q 045250           37 IKEVGDGNLNFVYIVVGT----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMS  110 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~  110 (165)
                      ++.||.|....||+|...    .+ .++||.-..-.-.   .......+...|.++|+.+..  |..++-. .+.+....
T Consensus         1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~---~~~~~~~~~~~E~~il~~l~h--p~iv~~~~~~~~~~~~   75 (323)
T cd05584           1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIV---RNQKDTAHTKAERNILEAVKH--PFIVDLIYAFQTGGKL   75 (323)
T ss_pred             CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHH---hhhhhHHHHHHHHHHHHhCCC--CchhceeeEEecCCeE
Confidence            356899999999999863    34 6888875421110   011233466778888887753  5444433 23345567


Q ss_pred             eEEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          111 LIGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      .+||||++  ...|.+.+...... .    .++.+|...|.-+|...
T Consensus        76 ~lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  120 (323)
T cd05584          76 YLILEYLS--GGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQG  120 (323)
T ss_pred             EEEEeCCC--CchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            89999998  45777777655443 2    35667888888888754

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=96.47  E-value=0.069  Score=42.15  Aligned_cols=103  Identities=14%  Similarity=-0.058  Sum_probs=70.3

Q ss_pred             eEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEec
Q 045250           37 IKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRY  116 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vMEd  116 (165)
                      .+.+|.|....||++...+..+++|.-...         ...++...|..+|+.+..  |..++-.-.+..+...++||+
T Consensus        11 ~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~---------~~~~~~~~e~~~l~~~~~--~~i~~~~~~~~~~~~~~v~e~   79 (254)
T cd05083          11 GEIIGEGEFGAVLQGEYTGQKVAVKNIKCD---------VTAQAFLEETAVMTKLHH--KNLVRLLGVILHNGLYIVMEL   79 (254)
T ss_pred             eeeeccCCCCceEecccCCCceEEEeecCc---------chHHHHHHHHHHHHhCCC--CCcCeEEEEEcCCCcEEEEEC
Confidence            467888888899998765558999975321         233567778888877653  555555444555667899999


Q ss_pred             CCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 045250          117 LEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       117 l~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ++  ...|.+.+....   ..    -.++.++...|+.+|...
T Consensus        80 ~~--~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  120 (254)
T cd05083          80 MS--KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK  120 (254)
T ss_pred             CC--CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            97  346766665422   12    246778999999999654

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=96.47  E-value=0.048  Score=44.18  Aligned_cols=106  Identities=20%  Similarity=0.172  Sum_probs=70.8

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~  112 (165)
                      .+.+|.|....||++... ++ .+++|+-....-. .   .-..++...|.++|+.+.  .|. +++++.  .+.....+
T Consensus         6 ~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~-~---~~~~~~~~~e~~~l~~l~--h~~-i~~~~~~~~~~~~~~~   78 (290)
T cd05580           6 IKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIV-K---LKQVEHVLNEKRILQSIR--HPF-LVNLYGSFQDDSNLYL   78 (290)
T ss_pred             EEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhh-h---hhHHHHHHHHHHHHHhCC--CCC-ccceeeEEEcCCeEEE
Confidence            567888999999999876 34 7888875422100 0   112467778888888776  243 444443  46667789


Q ss_pred             EEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~  151 (165)
                      |||+++  ...|.+.+......+     .++.+|...|..+|..
T Consensus        79 v~e~~~--~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~  120 (290)
T cd05580          79 VMEYVP--GGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSL  120 (290)
T ss_pred             EEecCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999997  346777776554322     3667888888888864

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=96.45  E-value=0.044  Score=42.86  Aligned_cols=105  Identities=17%  Similarity=0.074  Sum_probs=70.1

Q ss_pred             eEeccCCceeEEEEEEeCC-----C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCC
Q 045250           37 IKEVGDGNLNFVYIVVGTS-----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRT  108 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~-----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e  108 (165)
                      .+.+|.|....||++...+     + .+++|...+...     + -.......|.+.|+.+..  |. +++++  +.+..
T Consensus         4 ~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~-----~-~~~~~~~~e~~~l~~l~~--~~-i~~~~~~~~~~~   74 (258)
T smart00219        4 GKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD-----E-QQIEEFLREARIMRKLDH--PN-IVKLLGVCTEEE   74 (258)
T ss_pred             cceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC-----h-HHHHHHHHHHHHHHhcCC--Cc-hheEEEEEcCCC
Confidence            3578999999999998864     2 688898753321     1 134567778888887722  43 34444  34456


Q ss_pred             CceEEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 045250          109 MSLIGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ...++||+++  ..++.+.+....   ..    ..++.++...|+-+|...
T Consensus        75 ~~~~i~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~  123 (258)
T smart00219       75 PLMIVMEYME--GGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN  123 (258)
T ss_pred             eeEEEEeccC--CCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            8889999998  346666665433   21    357778888888888664

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=96.45  E-value=0.072  Score=43.14  Aligned_cols=107  Identities=11%  Similarity=-0.064  Sum_probs=64.4

Q ss_pred             ccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEEEe
Q 045250           40 VGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLIGMR  115 (165)
Q Consensus        40 l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~vME  115 (165)
                      +|.|....||++.+. +| .+.+|...+....    ..-...+...|..+++......-..++.++.+  +.+...+|||
T Consensus         2 lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e   77 (279)
T cd05633           2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK----MKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILD   77 (279)
T ss_pred             cccCCCeEEEEEEECCCCcEEEEEEEEccccc----cchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEe
Confidence            678888999999886 45 7888866532211    01112233344445555443222334554433  4567789999


Q ss_pred             cCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          116 YLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       116 dl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |++  ..+|.+.+......     ..++.++...|+-+|...
T Consensus        78 ~~~--~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~  117 (279)
T cd05633          78 LMN--GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRF  117 (279)
T ss_pred             cCC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            998  34676666554322     246788888899998654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=96.44  E-value=0.043  Score=45.82  Aligned_cols=106  Identities=15%  Similarity=0.047  Sum_probs=68.4

Q ss_pred             eccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEEEe
Q 045250           39 EVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIGMR  115 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~vME  115 (165)
                      .||.|....||++.+. +| .++||....-....    .-...+...|.++|+....  |..++-. .+.+.+...+|||
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~----~~~~~~~~~E~~~l~~l~h--p~iv~~~~~~~~~~~~~lv~E   75 (328)
T cd05593           2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIA----KDEVAHTLTESRVLKNTRH--PFLTSLKYSFQTKDRLCFVME   75 (328)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh----hhHHHHHHHHHHHHHhCCC--CCCcceEEEEEcCCEEEEEEe
Confidence            4788999999999876 45 79999865432211    1223466677777766543  4433332 3345667789999


Q ss_pred             cCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          116 YLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       116 dl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |++ + ..|...+......     ..++.+|...|+-+|...
T Consensus        76 y~~-~-g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~  115 (328)
T cd05593          76 YVN-G-GELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGK  115 (328)
T ss_pred             CCC-C-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            998 3 4566666554332     246778888899898754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=96.44  E-value=0.042  Score=45.59  Aligned_cols=108  Identities=15%  Similarity=0.059  Sum_probs=70.6

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~  112 (165)
                      +..||.|....||++... ++ .++||.-..-...    ..-...+...|.++++....  +..++.++.  .+.+...+
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~~e~~~l~~~~~--~~~i~~~~~~~~~~~~~~l   78 (323)
T cd05616           5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVI----QDDDVECTMVEKRVLALSGK--PPFLTQLHSCFQTMDRLYF   78 (323)
T ss_pred             EEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh----hhhHHHHHHHHHHHHHhccC--CCeEeeEEEEEecCCEEEE
Confidence            567899999999999876 34 7888876532211    11233456667777765432  345555543  35566779


Q ss_pred             EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||||++ + ..|...+.....+     -.++.+|...|+-+|...
T Consensus        79 v~E~~~-~-g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  121 (323)
T cd05616          79 VMEYVN-G-GDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKG  121 (323)
T ss_pred             EEcCCC-C-CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999998 3 4677766554332     247788889999999753

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=96.44  E-value=0.045  Score=46.14  Aligned_cols=108  Identities=14%  Similarity=0.045  Sum_probs=70.8

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      .++.||.|....||++... +| .++||.-..--...    .-...+...|..+|..+..  |. +++++  +.+.+...
T Consensus         5 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~l~~l~~--~~-iv~~~~~~~~~~~~~   77 (360)
T cd05627           5 SLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLE----KEQVAHIRAERDILVEADG--AW-VVKMFYSFQDKRNLY   77 (360)
T ss_pred             EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhh----hhhHHHHHHHHHHHHhCCC--CC-EeeEEEEEEcCCEEE
Confidence            4678999999999999876 45 78888654321110    1224566778888776542  33 33333  34566779


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  +..|.+.+.+.... .    .++.+|...|..+|...
T Consensus        78 lv~E~~~--gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~g  121 (360)
T cd05627          78 LIMEFLP--GGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLG  121 (360)
T ss_pred             EEEeCCC--CccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  35777777665433 2    36677888888888654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=96.43  E-value=0.06  Score=44.85  Aligned_cols=105  Identities=20%  Similarity=0.145  Sum_probs=72.0

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      .+..+|.|....||++.+. +| .+++|.-.....      +....+...|.+.|+.+..  |. +.+++  +.+.+...
T Consensus         9 ~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~-iv~~~~~~~~~~~~~   79 (331)
T cd06649           9 RISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIK------PAIRNQIIRELQVLHECNS--PY-IVGFYGAFYSDGEIS   79 (331)
T ss_pred             EEEeecCCCCEEEEEEEECCCCcEEEEEEeecccC------HHHHHHHHHHHHHHHHCCC--CC-CCeEEEEEEECCEEE
Confidence            5678999999999999986 45 677787653221      1123567778888877642  33 34444  34667789


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      +||||++  ...|.+.+......     ..++.++...|+-+|..
T Consensus        80 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~  122 (331)
T cd06649          80 ICMEHMD--GGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREK  122 (331)
T ss_pred             EEeecCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence            9999998  45787777664432     25677888888888853

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=96.41  E-value=0.074  Score=42.14  Aligned_cols=105  Identities=24%  Similarity=0.157  Sum_probs=70.1

Q ss_pred             eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGM  114 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vM  114 (165)
                      -++.+|.|....||++...++ .+++|.-...        ....++...|...|+.+..  |..++-.-.+..+...++|
T Consensus        10 ~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~--------~~~~~~~~~E~~~l~~l~h--~~i~~~~~~~~~~~~~~v~   79 (260)
T cd05067          10 LVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQG--------SMSPEAFLAEANLMKQLQH--PRLVRLYAVVTQEPIYIIT   79 (260)
T ss_pred             eeeeeccCccceEEeeecCCCceEEEEEecCC--------CCcHHHHHHHHHHHHhcCC--cCeeeEEEEEccCCcEEEE
Confidence            357899999999999998777 8998864311        1334667778888887753  3333322233456789999


Q ss_pred             ecCCCCchHHHHHHHc--CCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          115 RYLEPPHIILRKGLIA--GIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 Edl~~~~~~lr~~l~~--g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |++.  ...|.+.+..  +...     -.++.++...|..+|...
T Consensus        80 e~~~--~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~  122 (260)
T cd05067          80 EYME--NGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN  122 (260)
T ss_pred             EcCC--CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            9997  3467666654  2221     246678888889888654

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=96.39  E-value=0.044  Score=45.53  Aligned_cols=106  Identities=14%  Similarity=0.070  Sum_probs=68.8

Q ss_pred             eccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEE
Q 045250           39 EVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLIGM  114 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~vM  114 (165)
                      .||.|....||++.+. ++ .+.||.-..-.-..    .-..++...|.+.|+..... |. +++++.  .+.+...+||
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~l~~~~~h-~~-iv~~~~~~~~~~~~~iv~   75 (320)
T cd05590           2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQ----DDDVECTMTEKRILSLARNH-PF-LTQLYCCFQTPDRLFFVM   75 (320)
T ss_pred             eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh----ccHHHHHHHHHHHHHhccCC-Cc-hhceeeEEEcCCEEEEEE
Confidence            5788989999999876 34 68888755322110    12345666777777665432 33 333433  3556678999


Q ss_pred             ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 Edl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||++  ...|...+.....+     ..++.+|...|+-+|...
T Consensus        76 Ey~~--~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~  116 (320)
T cd05590          76 EFVN--GGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKG  116 (320)
T ss_pred             cCCC--CchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9998  45777777654432     246678888899888764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=96.38  E-value=0.031  Score=46.49  Aligned_cols=107  Identities=17%  Similarity=0.149  Sum_probs=70.7

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      -++.||.|....||++.+. +| .++||.-.......    .-...+...|.++|+....  |. +++++  +.|.+...
T Consensus         5 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~l~~~~~--~~-i~~~~~~~~~~~~~~   77 (350)
T cd05573           5 VIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIK----RNQIAHVRAERDILADADS--PW-IVKLYYSFQDEEHLY   77 (350)
T ss_pred             EEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhh----ccHHHHHHHHHHHHHhcCC--CC-ccchhhheecCCeEE
Confidence            3577899999999999987 45 79999765332110    1223456667777776652  32 33332  34667788


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~  151 (165)
                      +||||++  ...|.+.+.+.... .    .++.+|...|+-+|..
T Consensus        78 lv~e~~~--~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~  120 (350)
T cd05573          78 LVMEYMP--GGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKL  120 (350)
T ss_pred             EEEcCCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999997  34777777665332 2    4667888899999974

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>PHA02988 hypothetical protein; Provisional

Probab=96.37  E-value=0.057  Score=44.07  Aligned_cols=107  Identities=13%  Similarity=0.075  Sum_probs=72.8

Q ss_pred             eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC------CC
Q 045250           36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR------TM  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~------e~  109 (165)
                      +...++.|....||+....+..++||.-...-..    -..-.++...|...|+.+..  | ++.+++.+-.      ..
T Consensus        24 ~~~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~E~~~l~~l~h--~-nIv~~~g~~~~~~~~~~~   96 (283)
T PHA02988         24 TSVLIKENDQNSIYKGIFNNKEVIIRTFKKFHKG----HKVLIDITENEIKNLRRIDS--N-NILKIYGFIIDIVDDLPR   96 (283)
T ss_pred             CCeEEeeCCceEEEEEEECCEEEEEEeccccccc----cHHHHHHHHHHHHHHHhcCC--C-CEEEEeeeEEecccCCCc
Confidence            3456788888899999986448999976532211    01113566688888887753  4 5666665422      35


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      ..+||||++  ...|++.+.+....     -.++.++...|+.+|..
T Consensus        97 ~~lv~Ey~~--~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~  141 (283)
T PHA02988         97 LSLILEYCT--RGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKY  141 (283)
T ss_pred             eEEEEEeCC--CCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhc
Confidence            679999998  45788887665432     35777889999999964

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=96.37  E-value=0.046  Score=43.95  Aligned_cols=106  Identities=18%  Similarity=0.060  Sum_probs=68.8

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~  111 (165)
                      .+..+|.|....||++.+. ++ .+++|.-..      ..+.-...+...|..+|+...   ...+++++.+  +.....
T Consensus         8 ~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~------~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~   78 (277)
T cd06640           8 KLERIGKGSFGEVFKGIDNRTQQVVAIKIIDL------EEAEDEIEDIQQEITVLSQCD---SPYVTKYYGSYLKGTKLW   78 (277)
T ss_pred             hhhhcccCCCeEEEEEEEccCCEEEEEEEEec------cccHHHHHHHHHHHHHHHhCC---CCCEeeEEEEEEECCEEE
Confidence            4567899999999999875 34 788886431      111122356666777776553   2344444443  556789


Q ss_pred             EEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  ...|++.+..+....    .++.++...|+.+|...
T Consensus        79 lv~e~~~--~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~  121 (277)
T cd06640          79 IIMEYLG--GGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEK  121 (277)
T ss_pred             EEEecCC--CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999998  356777777665432    45667777788888654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=96.36  E-value=0.062  Score=44.80  Aligned_cols=108  Identities=13%  Similarity=0.035  Sum_probs=72.2

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      -.+.||.|....||++... +| .++||.....-...    .-..++...|..+|+.+..  |. +++++  +.+.+...
T Consensus        22 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~E~~~l~~l~h--p~-iv~~~~~~~~~~~~~   94 (329)
T PTZ00263         22 MGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILK----MKQVQHVAQEKSILMELSH--PF-IVNMMCSFQDENRVY   94 (329)
T ss_pred             EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhh----hhhHHHHHHHHHHHHhCCC--CC-CCcEEEEEEcCCEEE
Confidence            4678999999999999886 44 79999865321100    1123567778888887642  33 33333  45777889


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  ...|.+.+.+.... .    .++.+|...|+-+|...
T Consensus        95 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  138 (329)
T PTZ00263         95 FLLEFVV--GGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKD  138 (329)
T ss_pred             EEEcCCC--CChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  34677777665433 2    34567888888888754

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=96.36  E-value=0.037  Score=46.12  Aligned_cols=106  Identities=10%  Similarity=0.009  Sum_probs=68.7

Q ss_pred             eccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEE
Q 045250           39 EVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLIGM  114 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~vM  114 (165)
                      .||.|...-||++.+.. + .+.||.........    .-...+...|..+++..... | .++.++.  .+.....+||
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~~~~~~~~-~-~i~~~~~~~~~~~~~~lv~   75 (327)
T cd05617           2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHD----DEDIDWVQTEKHVFEQASSN-P-FLVGLHSCFQTTSRLFLVI   75 (327)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh----hhHHHHHHHHHHHHHhhcCC-C-CEeeEEEEEEeCCEEEEEE
Confidence            57889999999998864 3 68888865432111    11234566777777666442 3 3444443  2556677999


Q ss_pred             ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 Edl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||++  +..|...+......     ..++.+|...|+-+|...
T Consensus        76 e~~~--~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~  116 (327)
T cd05617          76 EYVN--GGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERG  116 (327)
T ss_pred             eCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9998  34676666554332     247788888999999764

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=96.35  E-value=0.053  Score=44.97  Aligned_cols=106  Identities=16%  Similarity=0.071  Sum_probs=67.6

Q ss_pred             eccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEE
Q 045250           39 EVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLIGM  114 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~vM  114 (165)
                      .||.|....||++.+. +| .++||.-..-....    .-.......|.++|+..... |. +++++.  .+.....+||
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~----~~~~~~~~~e~~~l~~~~~~-~~-i~~~~~~~~~~~~~~lv~   75 (316)
T cd05620           2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLI----DDDVECTMVEKRVLALAWEN-PF-LTHLYCTFQTKEHLFFVM   75 (316)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh----cchHHHHHHHHHHHHhccCC-CC-ccCeeEEEEeCCEEEEEE
Confidence            5788888999999886 45 78888765433211    11334566777777654332 33 344432  3556677999


Q ss_pred             ecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          115 RYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 Edl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      |+++  +..|...+..+... .    .++.+|...|+-+|...
T Consensus        76 E~~~--~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  116 (316)
T cd05620          76 EFLN--GGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKG  116 (316)
T ss_pred             CCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9998  34676666654332 2    35678888899999654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=96.32  E-value=0.1  Score=41.42  Aligned_cols=104  Identities=17%  Similarity=0.100  Sum_probs=70.7

Q ss_pred             eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~  112 (165)
                      -.+.+|.|....||.+...++ .+.||+....        ..+.++...|...|+.+..  | .+++++.+  +.+...+
T Consensus         8 ~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~--------~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~~~~l   76 (256)
T cd05113           8 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG--------SMSEDEFIEEAKVMMKLSH--E-KLVQLYGVCTKQRPIYI   76 (256)
T ss_pred             EeeEecCcccceEEEEEecCCCcEEEEEcCCC--------cccHHHHHHHHHHHhcCCC--C-CeeeEEEEEccCCCcEE
Confidence            456789999999999987655 6888985421        1234567778888877652  4 44455533  3445689


Q ss_pred             EEecCCCCchHHHHHHHcCC-C-C----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGI-K-Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~-~-~----~~~a~~iG~~La~~h~~t  152 (165)
                      +||+++  ...|++.+.... . .    -.++.+|...|+-+|...
T Consensus        77 v~e~~~--~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  120 (256)
T cd05113          77 VTEYMS--NGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQ  120 (256)
T ss_pred             EEEcCC--CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999997  347777776532 2 2    257888999999998654

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=96.32  E-value=0.052  Score=45.06  Aligned_cols=106  Identities=13%  Similarity=0.037  Sum_probs=68.3

Q ss_pred             eccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEEEe
Q 045250           39 EVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIGMR  115 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~vME  115 (165)
                      .||.|....||++.+. +| .++||.-..-....    .-...+...|.++|+.+..  |..+.-. .+.+.+...+|||
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~l~~l~h--p~i~~~~~~~~~~~~~~lv~e   75 (323)
T cd05571           2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIA----KDEVAHTLTESRVLQNTRH--PFLTALKYSFQTHDRLCFVME   75 (323)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh----hHHHHHHHHHHHHHHhCCC--CCCCCEEEEEEcCCEEEEEEe
Confidence            4788999999999875 45 78999755322110    1123456677778876542  4433332 3345566779999


Q ss_pred             cCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          116 YLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       116 dl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |++  ...|.+.+..+..+     ..++.+|...|+-+|...
T Consensus        76 ~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~  115 (323)
T cd05571          76 YAN--GGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCD  115 (323)
T ss_pred             CCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            998  34666766665433     235678888899898764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=96.29  E-value=0.063  Score=44.23  Aligned_cols=105  Identities=17%  Similarity=0.166  Sum_probs=68.0

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC-----
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DR-----  107 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~-----  107 (165)
                      .+.+|.|....||++.+. +| .++||.-......     .....+...|.++|+.+..  |..+ +++.+  +.     
T Consensus         5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~E~~~l~~l~h--pniv-~~~~~~~~~~~~~~   76 (338)
T cd07859           5 QEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEH-----VSDATRILREIKLLRLLRH--PDIV-EIKHIMLPPSRREF   76 (338)
T ss_pred             EEEEeecCCeEEEEEEECCCCCEEEEEEechhhcc-----chhHHHHHHHHHHHHhCCC--CCEe-eecceEeccCCCCC
Confidence            467899999999999875 45 8999975432211     1223567788888887642  3322 23222  11     


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          108 TMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 e~~~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ....+|||+++.   .|.+.+.++..+     ..++.+|...|+-+|...
T Consensus        77 ~~~~lv~e~~~~---~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  123 (338)
T cd07859          77 KDIYVVFELMES---DLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTAN  123 (338)
T ss_pred             ceEEEEEecCCC---CHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            235899999972   566666654332     247788899999999765

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=96.28  E-value=0.081  Score=41.65  Aligned_cols=105  Identities=16%  Similarity=0.104  Sum_probs=70.3

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~  112 (165)
                      .+.+|.|....||++... ++ .+++|.-..      ..+.........|.++|+.+..  | .+++++  ..+.+...+
T Consensus         6 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~------~~~~~~~~~~~~e~~~l~~l~~--~-~i~~~~~~~~~~~~~~i   76 (267)
T cd06610           6 IEVIGVGATAVVYAAICLPNNEKVAIKRIDL------EKCQTSVDELRKEVQAMSQCNH--P-NVVKYYTSFVVGDELWL   76 (267)
T ss_pred             eeeecCCCCeEEEEEEEcCCCcEEEEEEecc------CCcchHHHHHHHHHHHHHhcCC--C-CEEEEEEEEeeCCEEEE
Confidence            566888999999999865 44 788886431      2222355677888888877643  2 333333  456778889


Q ss_pred             EEecCCCCchHHHHHHHcC----CCC----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAG----IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g----~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +||+++  ...+.+.+.++    ...    ..++.+|...|+-+|...
T Consensus        77 v~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~  122 (267)
T cd06610          77 VMPYLS--GGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG  122 (267)
T ss_pred             EEeccC--CCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999998  34666666542    122    246788889999998654

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=96.28  E-value=0.1  Score=40.84  Aligned_cols=104  Identities=18%  Similarity=0.014  Sum_probs=65.2

Q ss_pred             eccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEEEec
Q 045250           39 EVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIGMRY  116 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~vMEd  116 (165)
                      .+|.|....||++...++ .+++|.-..-..      .-...+...|.+.|+.+..  |..++-. +..+.....+|||+
T Consensus         2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~------~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~e~   73 (250)
T cd05085           2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLP------QELKIKFLSEARILKQYDH--PNIVKLIGVCTQRQPIYIVMEL   73 (250)
T ss_pred             ccCCCCCceEEEEEecCCcEEEEEecCCcCC------HHHHHHHHHHHHHHHhCCC--CCcCeEEEEEecCCccEEEEEC
Confidence            478888889999987766 788886432110      0112345667777776632  4433322 44566778899999


Q ss_pred             CCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250          117 LEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       117 l~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ++  ...+.+.+....  ..    -.++.++...|..+|...
T Consensus        74 ~~--~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  113 (250)
T cd05085          74 VP--GGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKN  113 (250)
T ss_pred             CC--CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            98  346666665432  22    256677888888888654

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=96.28  E-value=0.083  Score=41.86  Aligned_cols=104  Identities=17%  Similarity=0.133  Sum_probs=68.5

Q ss_pred             eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~  112 (165)
                      -.+.+|.|....||++...++ .++||.-.+.      +  ........|.+.|+.+..  |. +++++  ..+.....+
T Consensus        10 ~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~------~--~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~~~~~~l   78 (261)
T cd05068          10 LLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPG------T--MDPKDFLAEAQIMKKLRH--PK-LIQLYAVCTLEEPIYI   78 (261)
T ss_pred             eEEEecccCCccEEEEEecCCeEEEEEeeCCC------c--ccHHHHHHHHHHHHHCCC--CC-ccceeEEEecCCCeee
Confidence            357889888889999987655 7888875421      1  123445667778877652  33 33344  334455679


Q ss_pred             EEecCCCCchHHHHHHHcCC--C-----CHHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGI--K-----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~--~-----~~~~a~~iG~~La~~h~~t  152 (165)
                      +||+++  ..+|.+.+....  .     ...++.++...|+.+|...
T Consensus        79 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  123 (261)
T cd05068          79 VTELMK--YGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN  123 (261)
T ss_pred             eeeccc--CCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999996  357777775432  1     1367788888899888653

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=96.26  E-value=0.11  Score=41.66  Aligned_cols=105  Identities=16%  Similarity=0.092  Sum_probs=68.5

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~  112 (165)
                      ++.+|.|....||++... +| .++||.-.....     ..-...+...|...|+.+..  |. +++++  +.+.....+
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-----~~~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~~~~~~~   76 (285)
T cd07861           5 IEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE-----EEGVPSTAIREISLLKELQH--PN-IVCLQDVLMQESRLYL   76 (285)
T ss_pred             eeEecccCceEEEEEEECCCCcEEEEEEeccccc-----cCCchHHHHHHHHHHHhcCC--CC-EeeeEEEEeeCCeEEE
Confidence            567899999999999875 45 788886542211     11222456678888887752  33 33444  347788899


Q ss_pred             EEecCCCCchHHHHHHHc----CCCCH----HHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIA----GIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~----g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      |||+++ .  .+.+.+..    +....    .++.+|...|+-+|...
T Consensus        77 v~e~~~-~--~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~  121 (285)
T cd07861          77 IFEFLS-M--DLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR  121 (285)
T ss_pred             EEecCC-C--CHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999997 2  45555433    22222    36888999999999753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=96.26  E-value=0.041  Score=44.39  Aligned_cols=109  Identities=17%  Similarity=0.150  Sum_probs=69.5

Q ss_pred             eEeccCCceeEEEEEEeC----CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-CCCc
Q 045250           37 IKEVGDGNLNFVYIVVGT----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD-RTMS  110 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-~e~~  110 (165)
                      .+.+|.|....||++...    ++ .+.||.-....-   .......++...|..+|+.+... |..++-...+. ....
T Consensus         5 ~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~---~~~~~~~~~~~~E~~~l~~~~~~-~~i~~~~~~~~~~~~~   80 (288)
T cd05583           5 LRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATI---VQKAKTAEHTRTERQVLEAVRRC-PFLVTLHYAFQTDTKL   80 (288)
T ss_pred             EEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHH---HhhhhHHHHHHHHHHHHHhccCC-cchhhhheeeecCCEE
Confidence            467899999999998753    34 688887542211   11233446777888888877543 44444333333 3445


Q ss_pred             eEEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhc
Q 045250          111 LIGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       111 ~~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~  151 (165)
                      .+|||+++ + ..|.+.+..+..+ .    .++.++...|+.+|..
T Consensus        81 ~lv~e~~~-~-~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~  124 (288)
T cd05583          81 HLILDYVN-G-GELFTHLYQREHFTESEVRVYIAEIVLALDHLHQL  124 (288)
T ss_pred             EEEEecCC-C-CcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHC
Confidence            59999998 3 4677777654432 2    3566888889988864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=96.26  E-value=0.061  Score=44.41  Aligned_cols=105  Identities=15%  Similarity=0.123  Sum_probs=67.1

Q ss_pred             EeccCCceeEEEEEEeC----CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCc
Q 045250           38 KEVGDGNLNFVYIVVGT----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMS  110 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~  110 (165)
                      +.+|.|....||+|...    +| .+++|.-....-.     .....+...|.++|+.+..  |..+ +++.  .+....
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~E~~~l~~l~h--~niv-~~~~~~~~~~~~   73 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK-----VRDRVRTKMERDILAEVNH--PFIV-KLHYAFQTEGKL   73 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh-----hhhHHHHHHHHHHHHhCCC--CCcc-cEEEEEEcCCEE
Confidence            56888989999998763    34 6888865422110     1223466678888876642  4333 3433  355667


Q ss_pred             eEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          111 LIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      .+||||++ + ..|.+.+.+....     -.++.+|...|+-+|...
T Consensus        74 ~lv~e~~~-~-~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~  118 (318)
T cd05582          74 YLILDFLR-G-GDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG  118 (318)
T ss_pred             EEEEcCCC-C-CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            79999998 3 4666666554432     246788899999999764

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=96.25  E-value=0.077  Score=43.59  Aligned_cols=105  Identities=18%  Similarity=0.091  Sum_probs=70.0

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~  112 (165)
                      .++.+|.|....||++... +| .+++|.......      .-...+...|.++|+.+..  |..++-. .+.+.+...+
T Consensus         5 ~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~l   76 (308)
T cd06615           5 KLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIK------PAIRNQIIRELKVLHECNS--PYIVGFYGAFYSDGEISI   76 (308)
T ss_pred             EEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccC------HHHHHHHHHHHHHHHhCCC--CCCCeEEEEEeeCCEEEE
Confidence            3567899999999999876 45 677776543221      0123456778888887743  4333222 4457788899


Q ss_pred             EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHh
Q 045250          113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLF  150 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~  150 (165)
                      +|||++  ...|.+.+......     ..++.+|...|+-+|.
T Consensus        77 v~ey~~--~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~  117 (308)
T cd06615          77 CMEHMD--GGSLDQVLKKAGRIPENILGKISIAVLRGLTYLRE  117 (308)
T ss_pred             EeeccC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            999998  34777776553322     2577888889999995

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=96.25  E-value=0.011  Score=55.16  Aligned_cols=105  Identities=18%  Similarity=0.139  Sum_probs=72.8

Q ss_pred             cc-eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-----
Q 045250           34 DL-TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-----  105 (165)
Q Consensus        34 ~~-~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-----  105 (165)
                      .| .-+.+|-|-.--|||..+. .| .|-||++.+..      ...+.+|...|.++|+.+. + |.. -+.+..     
T Consensus        14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~------~~r~~e~~~~EieilkKLn-h-~NI-Vk~f~iee~~~   84 (732)
T KOG4250|consen   14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES------SLRPRERWCREIEILKKLN-H-PNI-VKLFDIEETKF   84 (732)
T ss_pred             ceeehhhhcCCccceeeeecccccccchhHHhhhhhc------ccchHHHHHHHHHHHHHcC-c-hhh-hhhcccCCccc
Confidence            44 5566776655569999854 67 89999999876      3478899999999999987 2 221 111111     


Q ss_pred             ---cCCCceEEEecCCCCchHHHHHHHcCCC--------CHHHHHHHHHHHHHHH
Q 045250          106 ---DRTMSLIGMRYLEPPHIILRKGLIAGIK--------YPLLAEHMSEFMAKTL  149 (165)
Q Consensus       106 ---D~e~~~~vMEdl~~~~~~lr~~l~~g~~--------~~~~a~~iG~~La~~h  149 (165)
                         -...-++||||++  +..|+..|.+.+.        +-.+-.+++..|--+|
T Consensus        85 ~~~~~~~~vlvmEyC~--gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~Lr  137 (732)
T KOG4250|consen   85 LGLVTRLPVLVMEYCS--GGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLR  137 (732)
T ss_pred             cCcccccceEEEeecC--CCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHH
Confidence               2345689999999  5699999998763        2234555666665555

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=96.23  E-value=0.099  Score=40.49  Aligned_cols=106  Identities=18%  Similarity=0.035  Sum_probs=72.0

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcC--CCce
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDR--TMSL  111 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~--e~~~  111 (165)
                      .+.++.|...-||++.+. ++ .+++|.......     ++-..++...|.+.++.+.  .|..++-. ...+.  ....
T Consensus         5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-----~~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~~~   77 (260)
T cd06606           5 GELLGRGSFGSVYLALDKDTGELMAVKSVELSGD-----SEEELEALEREIRILSSLQ--HPNIVRYYGSERDEEKNTLN   77 (260)
T ss_pred             eeEeeecCceEEEEEEECCCCcEEEEEEeecccc-----chHHHHHHHHHHHHHHHcC--CCCEeeEEEEEecCCCCeEE
Confidence            466788888899999887 45 899998753321     1334567778888888776  24444433 22333  4678


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      ++||+.+  ..+|.+.+.+...+     -.++.++...|+-+|..
T Consensus        78 lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~  120 (260)
T cd06606          78 IFLEYVS--GGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSN  120 (260)
T ss_pred             EEEEecC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999997  45788877765422     25777888888888874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=96.22  E-value=0.07  Score=45.13  Aligned_cols=109  Identities=15%  Similarity=0.030  Sum_probs=69.1

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH-FDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~e~~~~  112 (165)
                      .++.||.|....||++... +| .+.||.-.......    .-...+...|.++|+.+..  |..++-... .|.....+
T Consensus         5 ~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~E~~il~~~~~--~~iv~~~~~~~~~~~~~l   78 (363)
T cd05628           5 SLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLE----KEQVGHIRAERDILVEADS--LWVVKMFYSFQDKLNLYL   78 (363)
T ss_pred             EeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHH----hhHHHHHHHHHHHHHhCCC--CCcceEEEEEecCCeEEE
Confidence            4678999999999999876 45 78888754321110    1123466678788776642  333333322 34556779


Q ss_pred             EEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      ||||++  ...|.+.+.+.... .    .++.+|...|.-+|...
T Consensus        79 v~E~~~--gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~g  121 (363)
T cd05628          79 IMEFLP--GGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLG  121 (363)
T ss_pred             EEcCCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999998  34777777654432 2    35667778888888653

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=96.21  E-value=0.066  Score=44.38  Aligned_cols=106  Identities=15%  Similarity=0.057  Sum_probs=67.9

Q ss_pred             eccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEEE
Q 045250           39 EVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLIGM  114 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~vM  114 (165)
                      .||.|....||++... ++ .++||.-..-...    -.-..++...|.+.|...... | ++++++.+  +.+...+||
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~~e~~~l~~~~~h-p-~i~~~~~~~~~~~~~~lv~   75 (316)
T cd05592           2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVL----EDDDVECTMVERRVLALAWEH-P-FLTHLFCTFQTKEHLFFVM   75 (316)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh----hhhhHHHHHHHHHHHHhccCC-C-CccceeeEEEcCCEEEEEE
Confidence            5788999999999876 34 7888976533211    112344556677776654332 3 34444433  556778999


Q ss_pred             ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 Edl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||++  +..|...+.....+     ..++.+|...|+-+|...
T Consensus        76 e~~~--gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~  116 (316)
T cd05592          76 EYLN--GGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKG  116 (316)
T ss_pred             cCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9998  34676666554332     236778888888898754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=96.21  E-value=0.14  Score=40.43  Aligned_cols=103  Identities=20%  Similarity=0.188  Sum_probs=69.9

Q ss_pred             eEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEE
Q 045250           37 IKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~v  113 (165)
                      .+.+|.|....||++.+.++ .++||.-.+-        ..+..+...|..+|+.+..  | .+++++.+  +.....++
T Consensus        11 ~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~--------~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~~~~~v   79 (261)
T cd05034          11 ERKLGAGQFGEVWMGTWNGTTKVAVKTLKPG--------TMSPEAFLQEAQIMKKLRH--D-KLVQLYAVCSEEEPIYIV   79 (261)
T ss_pred             eeeeccCcceEEEEEEEcCCceEEEEEecCC--------ccCHHHHHHHHHHHhhCCC--C-CEeeeeeeeecCCceEEE
Confidence            46788888899999987655 7888874421        1344677778888877652  3 44445443  33678899


Q ss_pred             EecCCCCchHHHHHHHcCC--CC-----HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIAGI--KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g~--~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  ..+|.+.+.+..  ..     ..++.++...|+-+|...
T Consensus        80 ~e~~~--~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~  123 (261)
T cd05034          80 TEYMS--KGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN  123 (261)
T ss_pred             EeccC--CCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99997  457877776532  11     356778888888888654

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=96.20  E-value=0.12  Score=42.13  Aligned_cols=109  Identities=17%  Similarity=0.151  Sum_probs=72.9

Q ss_pred             Ccc-eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCC
Q 045250           33 DDL-TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRT  108 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e  108 (165)
                      ..+ .++.+|.|..+.||++.+. ++ .+.+|.-..      ..+ -..++...|.++|+....  |..++-. ++.+..
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~------~~~-~~~~~~~~e~~~l~~~~h--~~v~~~~~~~~~~~   90 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNL------QQQ-PKKELIINEILVMRENKN--PNIVNYLDSYLVGD   90 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEec------CCc-chHHHHHHHHHHHHhCCC--CCEeeEEEEEEeCC
Confidence            344 5667999999999999865 44 788886431      111 234677788888877533  4444433 345677


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250          109 MSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ...+|||+++  ...|.+.+.++...    ..++.++...|+-+|...
T Consensus        91 ~~~lv~e~~~--~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~g  136 (296)
T cd06654          91 ELWVVMEYLA--GGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ  136 (296)
T ss_pred             EEEEeecccC--CCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8899999998  34676666554322    356678888899998765

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=96.19  E-value=0.082  Score=42.10  Aligned_cols=105  Identities=16%  Similarity=0.066  Sum_probs=68.9

Q ss_pred             eEeccCCceeEEEEEEeC-----CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc----
Q 045250           37 IKEVGDGNLNFVYIVVGT-----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD----  106 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D----  106 (165)
                      ++.+|.|..+.||++...     .+ .++||...+...      .....+...|.+.|+.+.   -..+++++.+.    
T Consensus         9 ~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~------~~~~~~~~~ei~~l~~l~---~~~i~~~~~~~~~~~   79 (284)
T cd05038           9 IKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGE------EQHRSDFEREIEILRTLD---HENIVKYKGVCEKPG   79 (284)
T ss_pred             heeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccc------hHHHHHHHHHHHHHHhCC---CCChheEEeeeecCC
Confidence            467899999999999753     24 788998653321      112345566666666553   23455665543    


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .....++||+++  ..+|++.+....  ..    ..++.+|...|+.+|...
T Consensus        80 ~~~~~lv~e~~~--~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~  129 (284)
T cd05038          80 GRSLRLIMEYLP--SGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQR  129 (284)
T ss_pred             CCceEEEEecCC--CCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence            336789999997  457777776533  21    357888889999999654

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=96.17  E-value=0.091  Score=41.60  Aligned_cols=104  Identities=18%  Similarity=0.132  Sum_probs=69.4

Q ss_pred             eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~  112 (165)
                      -.+.+|.|....||++....+ .+++|.-.+.        ....++...|.+.|+.+..  | .+++++.  .+.....+
T Consensus         8 ~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~--------~~~~~~~~~e~~~l~~l~~--~-~i~~~~~~~~~~~~~~l   76 (256)
T cd05059           8 FLKELGSGQFGVVHLGKWRGKIDVAIKMIREG--------AMSEDDFIEEAKVMMKLSH--P-NLVQLYGVCTKQRPIFI   76 (256)
T ss_pred             hhhhhccCCCceEEEeEecCCccEEEEEeccC--------CCCHHHHHHHHHHHHhCCC--C-CEEEEEEEEcCCCceEE
Confidence            346688899899999987655 7888864321        1234566678888877642  3 4555553  34455679


Q ss_pred             EEecCCCCchHHHHHHHcCC-C-C----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGI-K-Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~-~-~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||+++  ...|.+.+.... . .    -.++.+|...|+-+|...
T Consensus        77 v~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  120 (256)
T cd05059          77 VTEYMA--NGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNG  120 (256)
T ss_pred             EEecCC--CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999997  346777775432 1 1    257788899999998755

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=96.16  E-value=0.048  Score=43.70  Aligned_cols=103  Identities=19%  Similarity=0.127  Sum_probs=68.0

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~  112 (165)
                      ++.+|.|...-||++.+. ++ .+++|+.....       .-..++...|.++|+.+.  .| .+++++  +.+.....+
T Consensus        10 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~-------~~~~~~~~~e~~~l~~l~--h~-~i~~~~~~~~~~~~~~l   79 (280)
T cd06611          10 IGELGDGAFGKVYKAQHKETGLFAAAKIIQIES-------EEELEDFMVEIDILSECK--HP-NIVGLYEAYFYENKLWI   79 (280)
T ss_pred             HHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC-------HHHHHHHHHHHHHHHhCC--CC-ceeEEEEEEecCCeEEE
Confidence            456889999999999875 45 78888764211       112345667888887776  23 344444  346677789


Q ss_pred             EEecCCCCchHHHHHHHcC-CCC-----HHHHHHHHHHHHHHHhc
Q 045250          113 GMRYLEPPHIILRKGLIAG-IKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g-~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      |||+++  +..|...+.+. ..+     -.++.++...|+-+|..
T Consensus        80 v~e~~~--~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~  122 (280)
T cd06611          80 LIEFCD--GGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH  122 (280)
T ss_pred             EeeccC--CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999998  45666666542 221     24677788888888854

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=96.16  E-value=0.088  Score=41.71  Aligned_cols=108  Identities=11%  Similarity=0.018  Sum_probs=67.9

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v  113 (165)
                      .+.+|.|....||++... +| .++||.-..+...    -.-...+...|.+.|+.+..  |..++-+ ++.+.....++
T Consensus         7 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~----~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~~v   80 (267)
T cd08228           7 EKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMM----DAKARQDCVKEIDLLKQLNH--PNVIKYLDSFIEDNELNIV   80 (267)
T ss_pred             eeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccC----CHHHHHHHHHHHHHHHhCCC--cceeeeeeeEEECCeEEEE
Confidence            456899999999999875 44 8999975432211    01122345668888877743  3322222 34466778899


Q ss_pred             EecCCCCchHHHHHHHc----CCC-C----HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIA----GIK-Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~----g~~-~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  ..+|+..+..    +.. .    -.++.+|...|+-+|...
T Consensus        81 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~  126 (267)
T cd08228          81 LELAD--AGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR  126 (267)
T ss_pred             EEecC--CCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            99998  3366555532    121 2    256788999999999654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat

Probab=96.15  E-value=0.058  Score=47.72  Aligned_cols=117  Identities=19%  Similarity=0.172  Sum_probs=74.6

Q ss_pred             cceeEeccC--CceeEEEEEEeC------C-C---eEEEEecCc--ccc---ccC--CCCCCChHH------------HH
Q 045250           34 DLTIKEVGD--GNLNFVYIVVGT------S-G---SFVIKQALP--YVR---CIG--ESWPMTKER------------AY   82 (165)
Q Consensus        34 ~~~v~~l~~--Gn~N~v~rV~~~------~-g---svIvKqa~p--~~r---~~~--~~~~l~~~R------------~~   82 (165)
                      +.+++.||+  |.+..|.+|+-.      + .   +||||-+-.  ..+   ...  ..-.++.+.            -.
T Consensus        35 ~~~~~~Igdg~GFmS~I~lV~~dW~~~~~~~~LP~k~vlKI~S~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~l~~~HN  114 (414)
T PF07914_consen   35 NKKATNIGDGKGFMSRIALVEPDWTGEEEDENLPKKFVLKIPSQLALRALSENMKFEGGKGFDEEKEWEEFEKFLREMHN  114 (414)
T ss_pred             CcceeeccCCcchheeEEEEEeeeccCccccCCCceEEEEeccHhhHHHHHHhhccccccccchhhHHHHHHHHHHHhhH
Confidence            457777775  778999999843      1 1   899998852  222   211  011122222            23


Q ss_pred             HHHHHHHHhhccC--CCCCceEEE---EcCCC---ceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccc
Q 045250           83 FEALALKEHGKLC--PDHVPEVYH---FDRTM---SLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSL  154 (165)
Q Consensus        83 ~E~~~L~~~~~~~--p~~vP~v~~---~D~e~---~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd  154 (165)
                      .|..+++.+.+.-  +-.+|++|+   ||.++   ..++|||++ +.... . +..| ..+.--.+|.+.||++|..+-.
T Consensus       115 rEv~~Y~~~~k~~~~~l~~PKvY~~k~f~~en~~kG~IimE~ve-n~~~~-~-~~e~-~~~eql~~iv~aLA~~~A~sl~  190 (414)
T PF07914_consen  115 REVNFYKIFEKFNHPNLPYPKVYFGKKFDEENKLKGFIIMEYVE-NVHSM-D-MYEN-LSVEQLLQIVRALAKFHALSLK  190 (414)
T ss_pred             HHHHHHHHHHhcCCCCCCCCceeEEEecCCCCCCCCEEEEeccC-Cceee-c-ccCC-CCHHHHHHHHHHHHHHHHhHcc
Confidence            4556777777763  457999999   77776   789999999 44322 2 1122 3356678889999999998744

In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=96.13  E-value=0.087  Score=41.34  Aligned_cols=103  Identities=18%  Similarity=0.088  Sum_probs=66.4

Q ss_pred             eccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCceEEEe
Q 045250           39 EVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV--YHFDRTMSLIGMR  115 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~e~~~~vME  115 (165)
                      .+|.|....||++.+.++ .+++|......      ..-...+...|.++++.+..  | .++++  +..+.....++||
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~------~~~~~~~~~~e~~~l~~l~~--~-~i~~~~~~~~~~~~~~~v~e   72 (251)
T cd05041           2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTL------PPDLKRKFLQEAEILKQYDH--P-NIVKLIGVCVQKQPIYIVME   72 (251)
T ss_pred             ccccCCCceEEEEEEeCCCcEEEEeccccC------CHHHHHHHHHHHHHHHhCCC--C-CeEEEEEEEecCCCeEEEEE
Confidence            577788888999998756 89999654321      11123456677777776642  3 33343  3456677889999


Q ss_pred             cCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250          116 YLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       116 dl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +++  ...|.+.+....  ..    -.++.++...|+.+|...
T Consensus        73 ~~~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~  113 (251)
T cd05041          73 LVP--GGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKN  113 (251)
T ss_pred             cCC--CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            997  346777664422  22    246667788888888554

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=96.13  E-value=0.16  Score=41.25  Aligned_cols=105  Identities=12%  Similarity=0.078  Sum_probs=70.4

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      .++.+|.|....||++... ++ .+++|+-.....      .-...+...|.++|+.+..  | ++.+++.  .+.....
T Consensus         9 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~-niv~~~~~~~~~~~~~   79 (288)
T cd07871           9 KLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE------EGAPCTAIREVSLLKNLKH--A-NIVTLHDIIHTERCLT   79 (288)
T ss_pred             EeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc------CCcchhHHHHHHHHHhCCC--C-CEeeEEEEEcCCCeEE
Confidence            4788999999999999876 44 788897642211      1123466778888877743  3 3445543  3556678


Q ss_pred             EEEecCCCCchHHHHHHHc-CCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIA-GIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~-g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++ .  .|.+.+.. +...     ..++.+|...|+-+|...
T Consensus        80 lv~e~~~-~--~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  123 (288)
T cd07871          80 LVFEYLD-S--DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRK  123 (288)
T ss_pred             EEEeCCC-c--CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999998 2  56666654 2222     246788999999999754

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=96.13  E-value=0.069  Score=44.24  Aligned_cols=106  Identities=13%  Similarity=0.040  Sum_probs=69.2

Q ss_pred             eccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEE
Q 045250           39 EVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLIGM  114 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~vM  114 (165)
                      .+|.|....||++.... + .+.||.-..-.-.. .   -..++...|.++|+.....  .++++++.  .+.+...+||
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~---~~~~~~~~e~~il~~~~~h--~~i~~~~~~~~~~~~~~lv~   75 (318)
T cd05570           2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQ-D---DDVECTMTEKRVLALAGKH--PFLTQLHSCFQTKDRLFFVM   75 (318)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh-h---hHHHHHHHHHHHHHhccCC--CCccceeeEEEcCCEEEEEE
Confidence            47888889999998763 4 78888754322111 1   2235666788888766532  34555554  4677789999


Q ss_pred             ecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          115 RYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 Edl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      ||++  +..|...+.++..+ .    .++.+|...|+-+|...
T Consensus        76 e~~~--~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~  116 (318)
T cd05570          76 EYVN--GGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERG  116 (318)
T ss_pred             cCCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9998  34676666655332 2    35677888888888643

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=96.12  E-value=0.12  Score=41.11  Aligned_cols=109  Identities=16%  Similarity=0.047  Sum_probs=69.1

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC--Cc
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRT--MS  110 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e--~~  110 (165)
                      .+.++.|....||++.+. +| .++||+.......  .+..-...+...|..+|+.+..  |. +++++.+  +.+  ..
T Consensus         7 ~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~--~~~~~~~~~~~~E~~~l~~l~h--~~-i~~~~~~~~~~~~~~~   81 (265)
T cd06652           7 GKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPES--PETSKEVNALECEIQLLKNLLH--ER-IVQYYGCLRDPMERTL   81 (265)
T ss_pred             eeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCC--cccHHHHHHHHHHHHHHHhcCC--CC-eeeEEeEeccCCCceE
Confidence            567888888899999875 45 8999976432211  1111223466678888877742  33 3344443  322  24


Q ss_pred             eEEEecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhcc
Q 045250          111 LIGMRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdl~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~t  152 (165)
                      .++||+++  ...|++.+.+... .    -.++.++...|+.+|...
T Consensus        82 ~~v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~  126 (265)
T cd06652          82 SIFMEHMP--GGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNM  126 (265)
T ss_pred             EEEEEecC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            47999998  4578877765332 2    357888999999999765

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=96.12  E-value=0.1  Score=41.98  Aligned_cols=107  Identities=15%  Similarity=0.022  Sum_probs=69.1

Q ss_pred             eeEeccCCceeEEEEEEeC-----CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-c--
Q 045250           36 TIKEVGDGNLNFVYIVVGT-----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-D--  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D--  106 (165)
                      .++.+|.|....||++...     .+ .+++|+..+...   .   -..++...|.++|+.+..  |..++-.-.+ +  
T Consensus         8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~---~---~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~   79 (284)
T cd05079           8 RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG---G---NHIADLKKEIEILRNLYH--ENIVKYKGICTEDG   79 (284)
T ss_pred             hceecCCCCceeEEEEEEccCCCCccceEEEEEcCcccc---H---HHHHHHHHHHHHHHhCCC--CCeeeeeeEEecCC
Confidence            5678999999999998732     34 799998654322   1   123567778888877643  4443332222 2  


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .....+||||++  +..|.+.+.+..  ..    -.++.+|...|+-+|...
T Consensus        80 ~~~~~lv~e~~~--g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~g  129 (284)
T cd05079          80 GNGIKLIMEFLP--SGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQ  129 (284)
T ss_pred             CCceEEEEEccC--CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            244679999997  347777765432  11    257778888898888654

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=96.11  E-value=0.067  Score=44.14  Aligned_cols=105  Identities=12%  Similarity=0.101  Sum_probs=68.7

Q ss_pred             ccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEEEec
Q 045250           40 VGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIGMRY  116 (165)
Q Consensus        40 l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~vMEd  116 (165)
                      ||.|....||++.+. ++ .+.+|.-......    -.-...+...|.++|+.+.  .|..++-. .+.+.+...+||||
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~----~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~lv~e~   74 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIV----SRSEVTHTLAERTVLAQVN--CPFIVPLKFSFQSPEKLYLVLAF   74 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhh----hhhHHHHHHHHHHHHHhCC--CCcEeceeeEEecCCeEEEEEcC
Confidence            577888899999886 34 7888875422111    0123456777888887764  25555533 23466778899999


Q ss_pred             CCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          117 LEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       117 l~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ++  ...|.+.+.....+     ..++.+|...|.-+|...
T Consensus        75 ~~--~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  113 (312)
T cd05585          75 IN--GGELFHHLQREGRFDLSRARFYTAELLCALENLHKFN  113 (312)
T ss_pred             CC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            98  35677777554332     246678888898898754

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=96.07  E-value=0.2  Score=39.87  Aligned_cols=105  Identities=13%  Similarity=0.145  Sum_probs=66.5

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcC--CCc
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDR--TMS  110 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~--e~~  110 (165)
                      +..+|.|..+.||++.+. ++ .+++|+.......      ....+...|...|+.+... |. +++++  +.|.  +..
T Consensus         4 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~------~~~~~~~~e~~~l~~l~~h-~~-i~~~~~~~~~~~~~~~   75 (282)
T cd07831           4 LGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKS------LEQVNNLREIQALRRLSPH-PN-ILRLIEVLFDRKTGRL   75 (282)
T ss_pred             EeeccccccceEEEEEEcCCCcEEEEEEehhccCC------chhhhHHHHHHHHhhcCCC-CC-ccceEEEEecCCCCcE
Confidence            567899999999999875 44 7889976543221      1122344577777666443 33 23333  3455  678


Q ss_pred             eEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250          111 LIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .+|||+++  . .+.+.+.+..  ..    -.++.+|...|..+|...
T Consensus        76 ~lv~e~~~--~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~  120 (282)
T cd07831          76 ALVFELMD--M-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNG  120 (282)
T ss_pred             EEEEecCC--c-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999997  3 4556665432  22    246778888888888764

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=96.04  E-value=0.12  Score=40.09  Aligned_cols=107  Identities=19%  Similarity=0.146  Sum_probs=72.3

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v  113 (165)
                      ++.++.|...-||++.+. ++ .+++|.-....     ...-...+...|.++++.+.  .|..++-. .+.+.+...++
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~-----~~~~~~~~~~~e~~~l~~l~--~~~~~~~~~~~~~~~~~~lv   77 (258)
T cd08215           5 IKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSN-----MSEKEREDALNEVKILKKLN--HPNIIKYYESFEEKGKLCIV   77 (258)
T ss_pred             EeeeccCCCeEEEEEEEcCCCcEEEEEEeeccc-----CChHHHHHHHHHHHHHHhcC--CCChhheEEEEecCCEEEEE
Confidence            467888888899999987 34 78888754221     11234456777888888776  34433322 45566888899


Q ss_pred             EecCCCCchHHHHHHHcC----CCC-----HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIAG----IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g----~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  ..+|++.+.+.    ..+     ..++.++...|+.+|...
T Consensus        78 ~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~  123 (258)
T cd08215          78 MEYAD--GGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK  123 (258)
T ss_pred             EEecC--CCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99998  45777777652    221     357888889999999753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=96.03  E-value=0.097  Score=41.07  Aligned_cols=102  Identities=14%  Similarity=0.011  Sum_probs=62.9

Q ss_pred             eccCCceeEEEEEEeCCCe------------EEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc
Q 045250           39 EVGDGNLNFVYIVVGTSGS------------FVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD  106 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~~gs------------vIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D  106 (165)
                      .+|.|..+.||++...+.+            +++|.    .+..  ...  ..+...|+..|+.+..  |..++-+-.+-
T Consensus         2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~----~~~~--~~~--~~~~~~e~~~l~~l~h--~~i~~~~~~~~   71 (259)
T cd05037           2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKV----LGSD--HRD--SLAFFETASLMSQLSH--KHLVKLYGVCV   71 (259)
T ss_pred             cccccccceEEEEEEeccCCccccCCccceeeeeec----cccc--hhh--HHHHHHHHHHHHcCCC--cchhheeeEEe
Confidence            4788888999999886322            33332    2211  111  4566677777776532  44443332222


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCC-CC-----HHHHHHHHHHHHHHHhcc
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLIAGI-KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~~g~-~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      .....+|||+++  ..+|.+.+.... ..     -.++.+|...|+-+|...
T Consensus        72 ~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~  121 (259)
T cd05037          72 RDENIMVEEYVK--FGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKK  121 (259)
T ss_pred             cCCcEEEEEcCC--CCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            267899999998  357887776544 21     246778899999999653

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=96.03  E-value=0.092  Score=43.85  Aligned_cols=106  Identities=11%  Similarity=0.009  Sum_probs=68.0

Q ss_pred             eccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceEEE
Q 045250           39 EVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLIGM  114 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~vM  114 (165)
                      .||.|....||++.+. ++ .+.+|.........    .-...+...|..+|...... |..+ +++  +.+.....+||
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~E~~~l~~~~~h-p~iv-~~~~~~~~~~~~~lv~   75 (329)
T cd05618           2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVND----DEDIDWVQTEKHVFEQASNH-PFLV-GLHSCFQTESRLFFVI   75 (329)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcc----hhHHHHHHHHHHHHHhcCCC-CcCC-ceeeEEEeCCEEEEEE
Confidence            5788999999999876 34 78888866443211    12344566777777655433 3333 333  34567788999


Q ss_pred             ecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          115 RYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 Edl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      ||++  ...|...+...... .    .++.+|...|.-+|...
T Consensus        76 E~~~--~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~  116 (329)
T cd05618          76 EYVN--GGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG  116 (329)
T ss_pred             eCCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9998  34666666554332 2    36677888888888764

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=96.03  E-value=0.22  Score=40.68  Aligned_cols=106  Identities=16%  Similarity=0.050  Sum_probs=69.7

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCc-eEEEEcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVP-EVYHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP-~v~~~D~e~~~~  112 (165)
                      -++.+|.|...-||++.+. +| .++||.-.....      .-...+...|.++|+.+..  |..+. .-++.+.+...+
T Consensus         9 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~l   80 (303)
T cd07869           9 KLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE------EGTPFTAIREASLLKGLKH--ANIVLLHDIIHTKETLTL   80 (303)
T ss_pred             EeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc------cccchhHHHHHHHHhhCCC--CCcCeEEEEEecCCeEEE
Confidence            4688999999999999986 45 788997542111      1223466778888887743  33222 223456788899


Q ss_pred             EEecCCCCchHHHHHHHcC--CCCH----HHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAG--IKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g--~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      |||+++.   .+.+.+...  ...+    .++.+|...|+-+|...
T Consensus        81 v~e~~~~---~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  123 (303)
T cd07869          81 VFEYVHT---DLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRY  123 (303)
T ss_pred             EEECCCc---CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999973   455555442  2332    46678888888888754

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=96.02  E-value=0.1  Score=42.55  Aligned_cols=105  Identities=14%  Similarity=0.070  Sum_probs=67.2

Q ss_pred             eEeccCCceeEEEEEEeCC-----------------C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCC
Q 045250           37 IKEVGDGNLNFVYIVVGTS-----------------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDH   98 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~-----------------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~   98 (165)
                      .+.||.|..-.||++...+                 + .+.+|+..+-...      -...+...|.++|+.+..  | +
T Consensus        10 ~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~E~~~l~~l~h--~-n   80 (304)
T cd05096          10 KEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANK------NARNDFLKEVKILSRLKD--P-N   80 (304)
T ss_pred             eeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCH------HHHHHHHHHHHHHhhcCC--C-C
Confidence            4678999999999997532                 2 4777776543211      112345567777766532  3 3


Q ss_pred             CceEE--EEcCCCceEEEecCCCCchHHHHHHHcCCC------------------------CHHHHHHHHHHHHHHHhcc
Q 045250           99 VPEVY--HFDRTMSLIGMRYLEPPHIILRKGLIAGIK------------------------YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus        99 vP~v~--~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~------------------------~~~~a~~iG~~La~~h~~t  152 (165)
                      +.+++  +.+.+...+||||++  ...|.+.+.....                        ...++.+|...|+-+|...
T Consensus        81 iv~~~~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~  158 (304)
T cd05096          81 IIRLLGVCVDEDPLCMITEYME--NGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN  158 (304)
T ss_pred             eeEEEEEEecCCceEEEEecCC--CCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence            44444  345677899999997  3467666644221                        1258899999999999764

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=96.00  E-value=0.14  Score=40.48  Aligned_cols=105  Identities=20%  Similarity=0.071  Sum_probs=66.3

Q ss_pred             eccCCceeEEEEEEeC---CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 045250           39 EVGDGNLNFVYIVVGT---SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGM  114 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~---~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vM  114 (165)
                      ++|.|....||++...   ++ .+.+|.......  .   +-..+....|...|+.+..  |..++-+-.+..+...+||
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~--~---~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~lv~   74 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNN--D---PALKDELLREANVMQQLDN--PYIVRMIGICEAESWMLVM   74 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCC--c---HHHHHHHHHHHHHHHhCCC--CCcceEEEEEcCCCcEEEE
Confidence            5788888899998542   34 788887542211  0   1122445667777766532  4444433344667788999


Q ss_pred             ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 Edl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |+++  ...|.+.+......     -.++.++...|.-+|...
T Consensus        75 e~~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~  115 (257)
T cd05116          75 ELAE--LGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETN  115 (257)
T ss_pred             ecCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9998  34777766554332     357788888898888764

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=96.00  E-value=0.21  Score=40.00  Aligned_cols=108  Identities=15%  Similarity=0.014  Sum_probs=68.6

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-------C
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD-------R  107 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-------~  107 (165)
                      ++.+|.|....||++.+. +| .+++|.-......  .   -...+...|.+.++.+..+--..+.+++.+-       .
T Consensus         5 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~--~---~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~   79 (288)
T cd07863           5 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNE--D---GLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE   79 (288)
T ss_pred             eeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCC--C---CCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence            567899999999999876 45 7889976543321  1   1122455688888877654333445555331       2


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 045250          108 TMSLIGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 e~~~~vMEdl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ....++||+++.   .+++.+....   ..    -.++.+|...|.-+|...
T Consensus        80 ~~~~lv~e~~~~---~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  128 (288)
T cd07863          80 TKVTLVFEHVDQ---DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC  128 (288)
T ss_pred             ceEEEEEccccc---CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            335799999982   5666554421   11    246778888888898654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=96.00  E-value=0.098  Score=43.61  Aligned_cols=106  Identities=9%  Similarity=-0.023  Sum_probs=68.0

Q ss_pred             eccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEE
Q 045250           39 EVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLIGM  114 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~vM  114 (165)
                      .||.|....||++... ++ .+.||.-......    -.-...+...|..+|+..... |. ++.++.  .+.....+||
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~----~~~~~~~~~~e~~il~~~~~h-p~-Iv~~~~~~~~~~~~~lv~   75 (329)
T cd05588           2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVN----DDEDIDWVQTEKHVFETASNH-PF-LVGLHSCFQTESRLFFVI   75 (329)
T ss_pred             eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh----hhhHHHHHHHHHHHHHhccCC-CC-CCceEEEEEcCCEEEEEE
Confidence            4788888999999876 44 7888875532211    112345566788888766443 33 333333  3566779999


Q ss_pred             ecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          115 RYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 Edl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      ||++  ...|...+...... .    .++.+|...|+-+|...
T Consensus        76 e~~~--~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~  116 (329)
T cd05588          76 EFVS--GGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERG  116 (329)
T ss_pred             eCCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9998  34666666554332 2    46678888888888754

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=95.99  E-value=0.046  Score=44.58  Aligned_cols=107  Identities=19%  Similarity=0.134  Sum_probs=70.1

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~  112 (165)
                      ++.+|.|....||++.+. +| .++||+-...--.    -.-..++...|.++|+.+..  |. +.+++  ..|.....+
T Consensus         6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~~E~~~l~~l~h--p~-iv~~~~~~~~~~~~~l   78 (291)
T cd05612           6 IKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVI----RLKQEQHVHNEKRVLKEVSH--PF-IIRLFWTEHDQRFLYM   78 (291)
T ss_pred             eeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHh----hhHHHHHHHHHHHHHHhCCC--Cc-HhhhHhhhccCCeEEE
Confidence            577999999999999886 45 7999975421100    00123456678888877643  32 33333  345666789


Q ss_pred             EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||||++  ...|.+.+.+....     -.++.+|...|+-+|...
T Consensus        79 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  121 (291)
T cd05612          79 LMEYVP--GGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKE  121 (291)
T ss_pred             EEeCCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999998  34677777654432     246778888999999764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=95.98  E-value=0.14  Score=41.93  Aligned_cols=107  Identities=20%  Similarity=0.151  Sum_probs=70.4

Q ss_pred             eEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~  112 (165)
                      .+.+|.|....||++...+ + .+++|.-..-.-.  .  .-...+...|.+.|+.+.  .| .+++++.+  +.....+
T Consensus         6 ~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~--~--~~~~~~~~~e~~~l~~l~--~~-~i~~~~~~~~~~~~~~l   78 (316)
T cd05574           6 IKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMI--K--RNKVKRVLTEQEILATLD--HP-FLPTLYASFQTETYLCL   78 (316)
T ss_pred             eeeecCCccEEEEEEEEcCCCcEEEEEEEeccccc--h--HHHHHHHHHHHHHHHhCC--CC-CchhheeeeecCCEEEE
Confidence            4678999999999999864 5 8999976532100  0  013356777888887776  23 34444433  5566789


Q ss_pred             EEecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |||++.  ..+|.+.+...  ..+     -.++.+|...|+-+|...
T Consensus        79 v~e~~~--~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~  123 (316)
T cd05574          79 VMDYCP--GGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG  123 (316)
T ss_pred             EEEecC--CCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999997  34777766543  222     135678889999998764

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=95.97  E-value=0.081  Score=41.72  Aligned_cols=108  Identities=12%  Similarity=0.074  Sum_probs=70.0

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCC-ceEEEEcCCCceEE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHV-PEVYHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~v-P~v~~~D~e~~~~v  113 (165)
                      .+.+|.|....||++... +| .+++|.-..+-... +   -...+...|.++|+.+..  |..+ +.-++.+.....++
T Consensus         7 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~---~~~~~~~~ei~~l~~~~~--~~i~~~~~~~~~~~~~~lv   80 (267)
T cd08224           7 EKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMD-A---KARQDCLKEIDLLKQLDH--PNVIKYLASFIENNELNIV   80 (267)
T ss_pred             eeeeccCCceEEEEEEEcCCCCEEEEEEeecccccc-h---hhHHHHHHHHHHHHhCCC--CCeeeeeeeeecCCeEEEE
Confidence            456889999999999987 55 78888765433221 1   234677888888887743  2221 22234566778899


Q ss_pred             EecCCCCchHHHHHHHc----CCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIA----GIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~----g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |||++  ...|...+..    +..+     -.++.+|...|+.+|...
T Consensus        81 ~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~  126 (267)
T cd08224          81 LELAD--AGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR  126 (267)
T ss_pred             EecCC--CCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99998  3466666543    1212     245778888888888754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=95.97  E-value=0.19  Score=40.37  Aligned_cols=107  Identities=15%  Similarity=-0.002  Sum_probs=66.9

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v  113 (165)
                      ++.+|.|....||++.+. ++ .++||.-..-     .......++...|.++|+.+..  |..++-. .+.+.+...+|
T Consensus         6 ~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~-----~~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~lv   78 (287)
T cd07848           6 LGVVGEGAYGVVLKCRHKETKEIVAIKKFKDS-----EENEEVKETTLRELKMLRTLKQ--ENIVELKEAFRRRGKLYLV   78 (287)
T ss_pred             EEEecccCCEEEEEEEECCCCcEEEEEEEecc-----cccccchhhHHHHHHHHHhCCC--ccccchhhhEecCCEEEEE
Confidence            567898999999999986 34 6888854321     1223345667778888887754  3332221 23455677899


Q ss_pred             EecCCCCchHHHHHHHcCC-CC----HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIAGI-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||++.  ..+......+. ..    -.++.+|...|.-+|...
T Consensus        79 ~e~~~~--~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~  120 (287)
T cd07848          79 FEYVEK--NMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKND  120 (287)
T ss_pred             EecCCC--CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999983  23333222222 22    247788888888888653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=95.97  E-value=0.14  Score=39.95  Aligned_cols=103  Identities=16%  Similarity=0.084  Sum_probs=70.3

Q ss_pred             eccCCceeEEEEEEeCC----C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           39 EVGDGNLNFVYIVVGTS----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      .+|.|....||++.+..    + .+++|........      ....+...|.+.++.+.  .|.. ++++  ..+.....
T Consensus         2 ~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~------~~~~~~~~e~~~l~~~~--~~~i-~~~~~~~~~~~~~~   72 (262)
T cd00192           2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASE------EERKDFLKEARVMKKLG--HPNV-VRLLGVCTEEEPLY   72 (262)
T ss_pred             ccccCCceEEEEEEEecCCCCCceEEeEeeccccch------hHHHHHHHHHHHHhhcC--CCCh-heeeeeecCCCceE
Confidence            47888888999998863    4 8899987644321      14567778888888876  2433 3333  34567789


Q ss_pred             EEEecCCCCchHHHHHHHcC---------CCC-----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAG---------IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g---------~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ++||+++  ..+|.+.+...         ...     -.++.++...|+.+|...
T Consensus        73 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~  125 (262)
T cd00192          73 LVLEYME--GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK  125 (262)
T ss_pred             EEEEecc--CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC
Confidence            9999997  34777777664         221     257778888888888743

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=95.94  E-value=0.12  Score=43.15  Aligned_cols=104  Identities=18%  Similarity=0.135  Sum_probs=68.7

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV--YHFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~e~~~  111 (165)
                      .++.+|.|....||++.+. +| .+++|.......      ....++...|.+.|+.+..  |. ++++  ++.+.....
T Consensus         9 ~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~-iv~~~~~~~~~~~~~   79 (333)
T cd06650           9 KISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIK------PAIRNQIIRELQVLHECNS--PY-IVGFYGAFYSDGEIS   79 (333)
T ss_pred             eeccccCCCCEEEEEEEECCCCcEEEEEEeecccC------HHHHHHHHHHHHHHHHCCC--Cc-ccceeEEEEECCEEE
Confidence            4567899999999999886 44 566665443221      1123466778888877742  33 3333  345777889


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHh
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLF  150 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~  150 (165)
                      +||||++  +..|.+.+......     ..++.++...|+.+|.
T Consensus        80 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~  121 (333)
T cd06650          80 ICMEHMD--GGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE  121 (333)
T ss_pred             EEEecCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            9999997  45787777654322     2456677888888885

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=95.94  E-value=0.096  Score=42.02  Aligned_cols=107  Identities=17%  Similarity=0.028  Sum_probs=70.2

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-----eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCC
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTM  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~  109 (165)
                      .++.+|.|....||++... +|     .+++|....      ...+....+...|+..|+.+.  .|..++-.-.+..+.
T Consensus        11 ~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~------~~~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~   82 (279)
T cd05057          11 KIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLRE------ETSPKANKEILDEAYVMASVD--HPHVVRLLGICLSSQ   82 (279)
T ss_pred             EcceecCCCCccEEEEEEecCCCCcceEEEEEeccC------CCCHHHHHHHHHHHHHHHhCC--CCCcceEEEEEecCc
Confidence            4568999999999999864 23     356665331      111223345666777787663  255555554455588


Q ss_pred             ceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ..++||+++  ...|.+.+.+..  ..    -.++.+|...|+.+|...
T Consensus        83 ~~~v~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  129 (279)
T cd05057          83 VQLITQLMP--LGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKR  129 (279)
T ss_pred             eEEEEecCC--CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            899999998  347777776532  21    357788999999999754

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=95.94  E-value=0.023  Score=45.55  Aligned_cols=78  Identities=23%  Similarity=0.238  Sum_probs=59.0

Q ss_pred             eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEe
Q 045250           36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMR  115 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vME  115 (165)
                      .+.+++-|.-.+||.+.-..+.+++|..++=         .+..=...|+++|+.++.  -..+|++|+||.+.-.  ||
T Consensus        26 v~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~d---------s~r~~l~kEakiLeil~g--~~~~p~vy~yg~~~i~--me   92 (201)
T COG2112          26 VEKELAKGTTSVVYLGEWRGGEVALKVRRRD---------SPRRNLEKEAKILEILAG--EGVTPEVYFYGEDFIR--ME   92 (201)
T ss_pred             hhhhhhcccccEEEEeeccCceEEEEEecCC---------cchhhHHHHHHHHHHhhh--cCCCceEEEechhhhh--hh
Confidence            5678899999999999988777888876632         333345789999988776  4679999999988766  99


Q ss_pred             cCCCCchHHHHHH
Q 045250          116 YLEPPHIILRKGL  128 (165)
Q Consensus       116 dl~~~~~~lr~~l  128 (165)
                      |+.  +..|.+.-
T Consensus        93 ~i~--G~~L~~~~  103 (201)
T COG2112          93 YID--GRPLGKLE  103 (201)
T ss_pred             hhc--Ccchhhhh
Confidence            997  45554433

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=95.93  E-value=0.085  Score=41.73  Aligned_cols=109  Identities=11%  Similarity=0.028  Sum_probs=69.2

Q ss_pred             EeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCC-CChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250           38 KEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWP-MTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~-l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v  113 (165)
                      +.+|.|-...||++.+. ++ .+++|........  .... -...+...|...|+.+..  |..++-. ++.+.+...+|
T Consensus         6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~--~~~~~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~~v   81 (268)
T cd06630           6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNT--SSEQEEVVEALRKEIRLMARLNH--PHIIRMLGATCEDSHFNLF   81 (268)
T ss_pred             ceecCcCceEEEEEEEcCCCcEEEEEEeecccCC--chhHHHHHHHHHHHHHHHHHcCC--CceehhhceeccCCeEEEE
Confidence            45788888999999874 44 8999986533211  1111 123466778888877643  3322221 23366777899


Q ss_pred             EecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+.+  ...|.+.+.+....     -.++.+|...|+-+|...
T Consensus        82 ~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~  123 (268)
T cd06630          82 VEWMA--GGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQ  123 (268)
T ss_pred             EeccC--CCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99998  45777777654332     246688888888888653

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=95.92  E-value=0.2  Score=42.04  Aligned_cols=107  Identities=19%  Similarity=0.136  Sum_probs=68.4

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC------
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR------  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~------  107 (165)
                      .+..+|.|....||++.+. +| .++||....-.     .......+...|.++|+.+..  |..++-.-.+..      
T Consensus        19 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~~   91 (343)
T cd07880          19 DLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-----QSELFAKRAYRELRLLKHMKH--ENVIGLLDVFTPDLSLDR   91 (343)
T ss_pred             EEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-----cchHHHHHHHHHHHHHHhcCC--CCccceeeeecCCccccc
Confidence            6789999999999999865 45 89999763211     112334567788888887753  333322211222      


Q ss_pred             -CCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250          108 -TMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 -e~~~~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                       ....+|||+++.   .+...+..+....    .++.+|...|+.+|...
T Consensus        92 ~~~~~lv~e~~~~---~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~g  138 (343)
T cd07880          92 FHDFYLVMPFMGT---DLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAG  138 (343)
T ss_pred             cceEEEEEecCCC---CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             235899999973   4555554444332    46778888888888754

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=95.92  E-value=0.15  Score=41.59  Aligned_cols=108  Identities=17%  Similarity=0.110  Sum_probs=68.1

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~  111 (165)
                      .++.+|.|...-||++... .+ .+++|.-.......    .-...+...|.++|+....  | .+++++..  +.....
T Consensus         5 ~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~----~~~~~~~~~e~~~l~~~~~--~-~i~~~~~~~~~~~~~~   77 (305)
T cd05609           5 TIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLIL----RNQIQQVFVERDILTFAEN--P-FVVSMFCSFETKRHLC   77 (305)
T ss_pred             EeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhh----HHHHHHHHHHHHHHHhCCC--C-CeeeeEEEEecCCEEE
Confidence            3577899999999999876 34 79999654322100    0112355567777776543  3 45555543  333348


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  +..|.+.+......     ..++.++...|+-+|...
T Consensus        78 lv~e~~~--g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  121 (305)
T cd05609          78 MVMEYVE--GGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYG  121 (305)
T ss_pred             EEEecCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  35777777554332     234567778888888765

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=95.91  E-value=0.1  Score=44.51  Aligned_cols=108  Identities=15%  Similarity=0.079  Sum_probs=71.0

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV--YHFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~e~~~  111 (165)
                      .++.||.|....||++.+. ++ .+.||.-...--. .   .-...+...|.++|+.+..  | +++++  .+.+.+...
T Consensus         5 ~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~-~---~~~~~~~~~E~~il~~l~h--~-~iv~l~~~~~~~~~~~   77 (381)
T cd05626           5 KIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVL-N---RNQVAHVKAERDILAEADN--E-WVVKLYYSFQDKDNLY   77 (381)
T ss_pred             EEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhh-h---hHHHHHHHHHHHHHHhcCC--C-CeeeeEEEEecCCEEE
Confidence            5788999999999999875 44 7888875432110 0   0123466778888877643  3 34443  334667788


Q ss_pred             EEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  +..|.+.+......+     .++.+|...|.-+|...
T Consensus        78 lv~E~~~--gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~g  121 (381)
T cd05626          78 FVMDYIP--GGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMG  121 (381)
T ss_pred             EEEecCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999998  346777776654332     34667888888888765

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=95.90  E-value=0.069  Score=41.88  Aligned_cols=106  Identities=19%  Similarity=0.107  Sum_probs=71.8

Q ss_pred             eEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~  112 (165)
                      ++.||.|-.-.||++.+.. + .+++|.-...-...     ........|...++.+. . |.. ++++  ..+.....+
T Consensus         4 ~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~-----~~~~~~~~e~~~~~~l~-~-~~i-~~~~~~~~~~~~~~~   75 (260)
T PF00069_consen    4 VKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEE-----EEREENIREIKILRRLR-H-PNI-VQILDVFQDDNYLYI   75 (260)
T ss_dssp             EEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHH-----HHHHHHHHHHHHHHHHT-B-TTB-CHEEEEEEESSEEEE
T ss_pred             eEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccc-----cccchhhhhhhcccccc-c-ccc-ccccccccccccccc
Confidence            5678888888999999874 4 79999887654321     11112234888888883 2 333 3333  335677889


Q ss_pred             EEecCCCCchHHHHHHH-cCCCC----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLI-AGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~-~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +||++.  ...|.+.+. .+...    -.++.+|...|..+|...
T Consensus        76 v~~~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~  118 (260)
T PF00069_consen   76 VMEYCP--GGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKG  118 (260)
T ss_dssp             EEEEET--TEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccccc--ccccccccccccccccccccccccccccccccccccc
Confidence            999998  347777776 34433    367888899999999863

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=95.89  E-value=0.087  Score=42.37  Aligned_cols=104  Identities=16%  Similarity=0.057  Sum_probs=68.0

Q ss_pred             EeccCCceeEEEEEEeC-----CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCC
Q 045250           38 KEVGDGNLNFVYIVVGT-----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTM  109 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~-----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~  109 (165)
                      +.+|.|....||++...     .+ .+.+|.......      .-...+...|.+.|+.+..  |. +++++.  .+...
T Consensus        11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~E~~~l~~l~h--~n-iv~~~~~~~~~~~   81 (283)
T cd05090          11 EELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINN------PQQWGEFQQEASLMAELHH--PN-IVCLLGVVTQEQP   81 (283)
T ss_pred             eeccccCCcceEEEEEecCCCCCcceEEEEeccCCCC------HHHHHHHHHHHHHHhhCCC--CC-eeeEEEEEecCCc
Confidence            78999999999998741     33 788888763211      1112355667778877642  33 344443  46677


Q ss_pred             ceEEEecCCCCchHHHHHHHcCC------------------C----CHHHHHHHHHHHHHHHhcc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGI------------------K----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~------------------~----~~~~a~~iG~~La~~h~~t  152 (165)
                      ..++||+++  ..+|++.+....                  .    .-.++.++...|+-+|...
T Consensus        82 ~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~  144 (283)
T cd05090          82 VCMLFEYLN--QGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF  144 (283)
T ss_pred             eEEEEEcCC--CCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC
Confidence            789999998  347777764221                  0    1247788999999999765

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=95.86  E-value=0.1  Score=44.15  Aligned_cols=106  Identities=10%  Similarity=0.071  Sum_probs=68.5

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCC-----
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-DRT-----  108 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~e-----  108 (165)
                      .+.||.|....||++.+. +| .++||.-.....     -.....|...|.++|+.+..  |..+.-.-.+ +++     
T Consensus         5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~   77 (372)
T cd07853           5 DRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQ-----NLVSCKRVFRELKMLCFFKH--DNVLSALDILQPPHIDPFE   77 (372)
T ss_pred             cceeeeCCCEEEEEEEECCCCCEEEEEecccccc-----chHHHHHHHHHHHHHHhCCC--CCcCCHhheecCCCccccc
Confidence            467899999999999975 45 899997542211     12334678889998887753  3322222111 222     


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          109 MSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ...+|||+++.   .|.+.+..+..+     -.++.+|...|.-+|...
T Consensus        78 ~~~lv~e~~~~---~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~  123 (372)
T cd07853          78 EIYVVTELMQS---DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAG  123 (372)
T ss_pred             eEEEEeecccc---CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            45789999972   466666555433     246778889999999764

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=95.86  E-value=0.095  Score=43.48  Aligned_cols=84  Identities=15%  Similarity=0.059  Sum_probs=52.9

Q ss_pred             eEeccCCceeEEEEEEe------CCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCC
Q 045250           37 IKEVGDGNLNFVYIVVG------TSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH-FDRT  108 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~------~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~e  108 (165)
                      .+.||.|....||++..      .++ .+.||+-.....      .-...+...|.++|+.+... |. +..++. +...
T Consensus        12 ~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-~n-iv~~~~~~~~~   83 (338)
T cd05102          12 GKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGAT------ASEHKALMSELKILIHIGNH-LN-VVNLLGACTKP   83 (338)
T ss_pred             eeEeccCCcceEEEEEEeccCCcccchhhheeccccccc------hHHHHHHHHHHHHHHHhccC-cc-eeeEEeEecCC
Confidence            57799999999999964      123 688887542211      11234677788888877543 43 444443 3332


Q ss_pred             --CceEEEecCCCCchHHHHHHHc
Q 045250          109 --MSLIGMRYLEPPHIILRKGLIA  130 (165)
Q Consensus       109 --~~~~vMEdl~~~~~~lr~~l~~  130 (165)
                        ...++|||++  +.+|.+.+..
T Consensus        84 ~~~~~lv~ey~~--~g~L~~~l~~  105 (338)
T cd05102          84 NGPLMVIVEFCK--YGNLSNFLRA  105 (338)
T ss_pred             CCceEEEEecCC--CCcHHHHHHh
Confidence              3568899998  3467666654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=95.85  E-value=0.13  Score=43.08  Aligned_cols=101  Identities=16%  Similarity=0.104  Sum_probs=65.1

Q ss_pred             eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhcc-CCCCCc-------eEEEEcC
Q 045250           36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKL-CPDHVP-------EVYHFDR  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~-~p~~vP-------~v~~~D~  107 (165)
                      .+..+ .|.-|-||+|.+++|..|+|.-.           .+.+|......+++.+++. .+..+|       ..+..+.
T Consensus        11 ~v~~i-~~~~~~v~~v~T~~G~~~Lk~~~-----------~~~~~l~~~~~~~~~L~~~G~~~~~~~~~t~~G~~~~~~~   78 (309)
T TIGR02904        11 QPEEM-EQVTGKLFKVYTDQGVFALKKLY-----------ADRNTIESFVSQIQVLSEKGFSRIVPVYPTKDGSYYLFHG   78 (309)
T ss_pred             Cceee-ecccCcEEEEEeCCCCEEEEEec-----------cchHhHHHHHHHHHHHHHcCCCcCCceeecCCCCeeeEEC
Confidence            34444 33356788999998899999865           1235777888888777652 222222       2333444


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccccccc
Q 045250          108 TMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYR  157 (165)
Q Consensus       108 e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l  157 (165)
                      +...++|++++ +.        .....+.-++++|+.||++|..+..+.-
T Consensus        79 ~~~~~L~~wi~-G~--------~~~~~~~~~~~~~~~LA~lH~~~~~~~~  119 (309)
T TIGR02904        79 HFLYYLMPWLD-IE--------RNEERNYQHESMFQELALLHRKTVKTER  119 (309)
T ss_pred             CEEEEEeCCcc-cc--------cccCCHHHHHHHHHHHHHHHHhhhCCCc
Confidence            55578899988 31        1112235689999999999999997543

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=95.83  E-value=0.28  Score=39.92  Aligned_cols=105  Identities=13%  Similarity=0.058  Sum_probs=69.5

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      .++.+|.|....||++.+. ++ .+++|+-.....      .-...+...|...|+.+..  |. +.+++  +.++....
T Consensus        10 ~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~n-I~~~~~~~~~~~~~~   80 (301)
T cd07873          10 KLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE------EGAPCTAIREVSLLKDLKH--AN-IVTLHDIIHTEKSLT   80 (301)
T ss_pred             EeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc------cCchhHHHHHHHHHHhcCC--CC-cceEEEEEecCCeEE
Confidence            5678999999999999875 34 788897643221      1123456678888877643  32 33333  33556778


Q ss_pred             EEEecCCCCchHHHHHHHcCC-CC-----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGI-KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~-~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++ .  .+++.+.+.. ..     -.++.+|...|+-+|...
T Consensus        81 lv~e~~~-~--~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~  124 (301)
T cd07873          81 LVFEYLD-K--DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRK  124 (301)
T ss_pred             EEEeccc-c--CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999997 2  6777665532 11     246778888999898754

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=95.83  E-value=0.12  Score=42.69  Aligned_cols=105  Identities=13%  Similarity=0.055  Sum_probs=61.9

Q ss_pred             eccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHH-HHHhhccCCCCCceEE--EEcCCCceEE
Q 045250           39 EVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALA-LKEHGKLCPDHVPEVY--HFDRTMSLIG  113 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~-L~~~~~~~p~~vP~v~--~~D~e~~~~v  113 (165)
                      .||.|....||++.+. +| .+++|.-......    ..-...+...|... ++...  .|..+ +++  +.+.+...+|
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~~e~~~~l~~~~--h~~iv-~~~~~~~~~~~~~lv   74 (321)
T cd05603           2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTIL----KKKEQNHIMAERNVLLKNLK--HPFLV-GLHYSFQTAEKLYFV   74 (321)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHH----HhhHHHHHHHHHHHHHHhCC--CCCcc-ceeeEEEcCCEEEEE
Confidence            5788888999999886 44 6888865432110    01112233334332 33221  14333 343  3467778899


Q ss_pred             EecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |||++ + ..|...+.....+     ..++.+|...|+-+|...
T Consensus        75 ~e~~~-~-~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~  116 (321)
T cd05603          75 LDYVN-G-GELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLN  116 (321)
T ss_pred             EcCCC-C-CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99998 3 3555555554332     246788899999999753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=95.83  E-value=0.14  Score=40.81  Aligned_cols=109  Identities=20%  Similarity=0.095  Sum_probs=69.0

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC--CCc
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDR--TMS  110 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~--e~~  110 (165)
                      .+.+|.|....||++.+. +| .+++|........  ....-...+...|..+|+.+..  |..++ ++.  .+.  ...
T Consensus         7 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~~~~~e~~~l~~l~h--~~i~~-~~~~~~~~~~~~~   81 (266)
T cd06651           7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPES--PETSKEVSALECEIQLLKNLQH--ERIVQ-YYGCLRDRAEKTL   81 (266)
T ss_pred             cceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCC--chhHHHHHHHHHHHHHHHHcCC--CCeee-EEEEEEcCCCCEE
Confidence            467899999999999875 35 7888875533221  1111123456667778877742  44443 332  222  345


Q ss_pred             eEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          111 LIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      .++||+++  ...|.+.+.++...     -.++.++...|+.+|...
T Consensus        82 ~l~~e~~~--~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~  126 (266)
T cd06651          82 TIFMEYMP--GGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNM  126 (266)
T ss_pred             EEEEeCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            68999997  35777777664432     146788888899898655

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=95.83  E-value=0.19  Score=40.38  Aligned_cols=107  Identities=16%  Similarity=0.033  Sum_probs=65.9

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~  112 (165)
                      .+..+|.|...-||++.+. ++ .++||....      ....-...+...|...++....  |..++-. ++.+.....+
T Consensus         8 ~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~------~~~~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~l   79 (277)
T cd06641           8 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDL------EEAEDEIEDIQQEITVLSQCDS--PYVTKYYGSYLKDTKLWI   79 (277)
T ss_pred             hheeEeecCCeEEEEEEECCCCcEEEEEEecc------ccchHHHHHHHHHHHHHHhcCC--CCEeEEEEEEEeCCeEEE
Confidence            4567899999999999865 45 788896431      1111122345556666665532  3333322 2345567889


Q ss_pred             EEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      |||+++  ...+.+.+..+....    .++.++...|..+|...
T Consensus        80 v~e~~~--~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~~  121 (277)
T cd06641          80 IMEYLG--GGSALDLLEPGPLDETQIATILREILKGLDYLHSEK  121 (277)
T ss_pred             EEEeCC--CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccCC
Confidence            999998  346667676665443    35566677777777543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=95.83  E-value=0.25  Score=39.44  Aligned_cols=105  Identities=14%  Similarity=0.112  Sum_probs=69.5

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      .++.++.|...-||++.+. +| .++||.-.....      .-..++...|.++|+.+..   ..+++++.  .+.+...
T Consensus         4 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~------~~~~~~~~~E~~~l~~l~h---~~i~~~~~~~~~~~~~~   74 (284)
T cd07836           4 QLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE------EGTPSTAIREISLMKELKH---ENIVRLHDVIHTENKLM   74 (284)
T ss_pred             EeeeeccCCceEEEEEEECCCCeEEEEEEeccccc------ccchHHHHHHHHHHHhhcC---CCEeeeeeeEeeCCcEE
Confidence            4677899999999999986 45 788997653221      1223566678888887742   23444443  4566789


Q ss_pred             EEEecCCCCchHHHHHHHcCC----CC----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGI----KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~----~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++ +  .+.+.+....    ..    -.++.+|...|+-+|...
T Consensus        75 lv~e~~~-~--~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  120 (284)
T cd07836          75 LVFEYMD-K--DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR  120 (284)
T ss_pred             EEEecCC-c--cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998 3  4555554422    22    246778888888888653

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=95.82  E-value=0.13  Score=40.36  Aligned_cols=107  Identities=20%  Similarity=0.096  Sum_probs=68.1

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v  113 (165)
                      ...++.|...-||++... +| .+++|.-.... . .   .....+...|.+.|+.+..  |..++-. ++.+.....++
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~-~---~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv   77 (256)
T cd08529           5 LNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSK-M-N---RREREEAIDEARVLAKLDS--SYIIRYYESFLDKGKLNIV   77 (256)
T ss_pred             eEEecCCCCeEEEEEEEcCCCcEEEEEEeehhh-C-C---HHHHHHHHHHHHHHHhcCC--CCeehheeeeccCCEEEEE
Confidence            456888888889999875 45 78888643211 0 0   1234566667777776642  3333222 33455678999


Q ss_pred             EecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |||++  +.+|++.+.+.  ...     -.++.++...|.-+|...
T Consensus        78 ~e~~~--~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~  121 (256)
T cd08529          78 MEYAE--NGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK  121 (256)
T ss_pred             EEeCC--CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99998  35788777663  222     246778888888888643

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=95.82  E-value=0.072  Score=43.10  Aligned_cols=105  Identities=15%  Similarity=0.021  Sum_probs=64.0

Q ss_pred             ccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCCCceEEEec
Q 045250           40 VGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-DRTMSLIGMRY  116 (165)
Q Consensus        40 l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~e~~~~vMEd  116 (165)
                      ||.|....||++.+. +| .+++|.-.......    .-..++...|.++|+.++.  |..++-...+ +.....+||||
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~----~~~~~~~~~E~~il~~l~~--~~i~~~~~~~~~~~~~~lv~e~   74 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKK----RKGYEGAMVEKRILAKVHS--RFIVSLAYAFQTKTDLCLVMTI   74 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhh----hHHHHHHHHHHHHHHhCCC--CcEeeeeEEEcCCCeEEEEEeC
Confidence            577888899999875 45 78888754321110    1122456678888877743  4333333333 44456799999


Q ss_pred             CCCCchHHHHHHHc----CC-CCH----HHHHHHHHHHHHHHhcc
Q 045250          117 LEPPHIILRKGLIA----GI-KYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       117 l~~~~~~lr~~l~~----g~-~~~----~~a~~iG~~La~~h~~t  152 (165)
                      ++  ..+|+..+..    +. ...    .++.+|...|+-+|...
T Consensus        75 ~~--~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~  117 (280)
T cd05608          75 MN--GGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR  117 (280)
T ss_pred             CC--CCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            97  3456555422    11 221    36778888898898753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=95.78  E-value=0.22  Score=38.95  Aligned_cols=107  Identities=16%  Similarity=0.068  Sum_probs=68.2

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~  112 (165)
                      .++.+|.|....||++.+. ++ .++||.-....-.     .-...+...|.++|+.+..  |..++-. .+.+.....+
T Consensus         4 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----~~~~~~~~~e~~~l~~~~~--~~i~~~~~~~~~~~~~~l   76 (256)
T cd08220           4 KIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMT-----KDERLAAQNECQVLKLLSH--PNIIEYYENFLEDKALMI   76 (256)
T ss_pred             EEEEecccCceEEEEEEEcCCCcEEEEEEEeccccc-----cHHHHHHHHHHHHHhhCCC--CchhheeeeEecCCEEEE
Confidence            3567899988899999875 33 7888886422110     1123566778888887743  4332222 2345677899


Q ss_pred             EEecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhc
Q 045250          113 GMRYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      |||+++  ...|.+.+.+.  ...     -.++.++...|+.+|..
T Consensus        77 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~  120 (256)
T cd08220          77 VMEYAP--GGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK  120 (256)
T ss_pred             EEecCC--CCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999998  34677776552  222     23566788888888854

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=95.78  E-value=0.072  Score=42.71  Aligned_cols=105  Identities=17%  Similarity=0.072  Sum_probs=66.9

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~  112 (165)
                      ++.+|.|....||++.+. ++ .+++|.-....      ..-..++...|.+.|+.+..  |. +++++  +.+.....+
T Consensus         9 ~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~~~~~~l   79 (277)
T cd06642           9 LERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE------AEDEIEDIQQEITVLSQCDS--PY-ITRYYGSYLKGTKLWI   79 (277)
T ss_pred             HHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc------chHHHHHHHHHHHHHHcCCC--Cc-cHhhhcccccCCceEE
Confidence            456788888899999875 45 78888654221      11123456667777766532  33 22233  346667889


Q ss_pred             EEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||+++  ...|.+.+..+...    ..++.+|...|+-+|...
T Consensus        80 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  121 (277)
T cd06642          80 IMEYLG--GGSALDLLKPGPLEETYIATILREILKGLDYLHSER  121 (277)
T ss_pred             EEEccC--CCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            999998  34677776655433    246778888888888544

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=95.77  E-value=0.3  Score=38.36  Aligned_cols=104  Identities=20%  Similarity=0.137  Sum_probs=68.0

Q ss_pred             eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v  113 (165)
                      -.+.+|.|...-||++...++ .+++|.-..-        .........|.+.|+.+..  |..++-. ++.+.....++
T Consensus         8 ~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~--------~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~~v   77 (256)
T cd05112           8 LVQEIGSGQFGLVWLGYWLEKRKVAIKTIREG--------AMSEEDFIEEAQVMMKLSH--PKLVQLYGVCTERSPICLV   77 (256)
T ss_pred             EEeeecCcccceEEEEEEeCCCeEEEEECCCC--------CCCHHHHHHHHHHHHhCCC--CCeeeEEEEEccCCceEEE
Confidence            357788898899999987655 7888854311        2344567778888887753  4433332 23355677899


Q ss_pred             EecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhc
Q 045250          114 MRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~  151 (165)
                      ||++.  ...|.+.+...  ...    -.++.++...|+.+|..
T Consensus        78 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~  119 (256)
T cd05112          78 FEFME--HGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESS  119 (256)
T ss_pred             EEcCC--CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99998  34677766542  222    24566777888888854

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=95.77  E-value=0.27  Score=39.19  Aligned_cols=105  Identities=14%  Similarity=0.063  Sum_probs=68.4

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~  112 (165)
                      ...+|.|..+.||++.+. +| .++||.-......     .-...+...|..+++.+.  .|.. ++++  +.+.....+
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~-----~~~~~~~~~e~~~l~~~~--~~~i-~~~~~~~~~~~~~~~   76 (286)
T cd07832           5 LGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE-----GGIPNQALREIKALQACQ--HPYV-VKLLDVFPHGSGFVL   76 (286)
T ss_pred             EeecccCCCcEEEEEEECCCCceEEEEEEEccccc-----chhhHHHHHHHHHHHhCC--CCCC-cceeeEEecCCeeEE
Confidence            467899999999999875 45 8999975432211     122356777888888776  3443 3333  346677889


Q ss_pred             EEecCCCCchHHHHHHHc-CC-CC----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIA-GI-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~-g~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||+++.   .|.+.+.. +. ..    -.++.+|...|+.+|...
T Consensus        77 v~e~~~~---~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  119 (286)
T cd07832          77 VMEYMPS---DLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANG  119 (286)
T ss_pred             EecccCC---CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999952   45555433 22 11    246778888999998764

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=95.77  E-value=0.13  Score=42.70  Aligned_cols=103  Identities=14%  Similarity=0.083  Sum_probs=66.4

Q ss_pred             eccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceEEE
Q 045250           39 EVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLIGM  114 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~vM  114 (165)
                      .+|.|....||++.+. +| .+.+|......-..    .-...+...|.++|+....  | ++++++  +.+.+...+||
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~----~~~~~~~~~e~~~l~~~~h--p-~i~~~~~~~~~~~~~~lv~   74 (325)
T cd05594           2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA----KDEVAHTLTENRVLQNSRH--P-FLTALKYSFQTHDRLCFVM   74 (325)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh----hhHHHHHHHHHHHHHhCCC--C-CCCceEEEEEcCCEEEEEE
Confidence            5788999999999875 45 78888765432110    1123455667777765432  3 344443  34566778999


Q ss_pred             ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHh
Q 045250          115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLF  150 (165)
Q Consensus       115 Edl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~  150 (165)
                      ||++  ...|...+..+...     -.++.+|...|+-+|.
T Consensus        75 E~~~--~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~  113 (325)
T cd05594          75 EYAN--GGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS  113 (325)
T ss_pred             eCCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            9998  34676766655433     2466788888999996

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=95.75  E-value=0.19  Score=39.29  Aligned_cols=108  Identities=15%  Similarity=0.052  Sum_probs=66.4

Q ss_pred             EeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceEE
Q 045250           38 KEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLIG  113 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~v  113 (165)
                      +.+|.|...-||++.+. ++ .+++|....--.  .....--..+...|...|+.+..  | .+++++  ..+.....++
T Consensus         6 ~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~~~~e~~~l~~~~h--~-~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           6 ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADD--GQTGQEAVKQLEQEIALLSKLQH--P-NIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             ceeeecCCceEEEEEEcCCCcEEEEEEEEEccc--cccchHHHHHHHHHHHHHHhcCC--C-CchheeeeEecCCeEEEE
Confidence            55788888899999876 55 899997532111  00011123456667777766632  3 333333  3455677899


Q ss_pred             EecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||++  ...|.+.+.+... .    -.++.+|...|+-+|...
T Consensus        81 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  122 (258)
T cd06632          81 LELVP--GGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRN  122 (258)
T ss_pred             EEecC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99997  3467776655432 2    246778888888888654

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=95.75  E-value=0.25  Score=39.74  Aligned_cols=105  Identities=15%  Similarity=0.087  Sum_probs=69.1

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV--YHFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~e~~~  111 (165)
                      .+..+|.|....||++.+. ++ .++||.-......      -.......|.++|+.+..  |. +.++  +..+.+...
T Consensus         9 ~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~------~~~~~~~~E~~~l~~l~h--~~-i~~~~~~~~~~~~~~   79 (291)
T cd07844           9 KLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE------GAPFTAIREASLLKDLKH--AN-IVTLHDIIHTKKTLT   79 (291)
T ss_pred             EEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc------CCchhHHHHHHHHhhCCC--cc-eeeEEEEEecCCeEE
Confidence            4578899999999999886 44 7999986543321      112244568888887743  32 3333  345667788


Q ss_pred             EEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +||||++ .  .|.+.+....  ..    -.++.++...|.-+|...
T Consensus        80 lv~e~~~-~--~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~  123 (291)
T cd07844          80 LVFEYLD-T--DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRR  123 (291)
T ss_pred             EEEecCC-C--CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999998 3  5666665422  22    245667888888888654

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=95.72  E-value=0.2  Score=39.26  Aligned_cols=103  Identities=18%  Similarity=0.161  Sum_probs=69.1

Q ss_pred             eEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~  112 (165)
                      ++.+|.|...-||++.+.+ | .++||.-....      .+....+...|.+.++.+.  .| .+++++  +.+.....+
T Consensus         6 ~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~------~~~~~~~~~~e~~~l~~l~--~~-~i~~~~~~~~~~~~~~l   76 (264)
T cd06623           6 VKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDG------DEEFRKQLLRELKTLRSCE--SP-YVVKCYGAFYKEGEISI   76 (264)
T ss_pred             eeeeeecCCeEEEEEEEcCCCcEEEEEEeccCc------chHHHHHHHHHHHHHHhcC--CC-CeeeEEEEEccCCeEEE
Confidence            4567777777889998873 5 79989754321      1123456667777777665  24 344444  345577889


Q ss_pred             EEecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHh
Q 045250          113 GMRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLF  150 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~  150 (165)
                      +||+++  ...|++.+..... .    -.++.++...|+.+|.
T Consensus        77 v~e~~~--~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~  117 (264)
T cd06623          77 VLEYMD--GGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHT  117 (264)
T ss_pred             EEEecC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhc
Confidence            999998  4578888765332 2    2577888899998997

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=95.72  E-value=0.15  Score=42.03  Aligned_cols=107  Identities=14%  Similarity=0.023  Sum_probs=70.4

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-----eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCC
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTM  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~  109 (165)
                      .+..+|.|....||++... +|     .+.||.-.+.      ...-...+...|..+|+.+..  |..++-.-.+..+.
T Consensus        11 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~~~e~~~l~~l~h--~niv~~~g~~~~~~   82 (316)
T cd05108          11 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA------TSPKANKEILDEAYVMASVDN--PHVCRLLGICLTST   82 (316)
T ss_pred             eeeeeecCCCceEEEEEEecCCCccceeEEEEecccc------CCHHHHHHHHHHHHHHHhCCC--CCCCeEEEEEcCCC
Confidence            5678999999999999753 33     2666765421      122234567778888776632  44444333344567


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCC--C----HHHHHHHHHHHHHHHhcc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGIK--Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~~--~----~~~a~~iG~~La~~h~~t  152 (165)
                      ..++||+++  ...|.+.+.+...  .    -.++.+|...|+-+|...
T Consensus        83 ~~~v~e~~~--~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~  129 (316)
T cd05108          83 VQLITQLMP--FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERR  129 (316)
T ss_pred             ceeeeecCC--CCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcC
Confidence            789999998  4577777776432  1    257789999999999754

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=95.71  E-value=0.093  Score=41.01  Aligned_cols=106  Identities=17%  Similarity=0.071  Sum_probs=68.7

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV--YHFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~e~~~~  112 (165)
                      .+.++.|...-||++... +| .+++|.-....     .+.....+...|.+.|+.+.  .| .++++  ++.+.....+
T Consensus         5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~-----~~~~~~~~~~~e~~~l~~l~--~~-~i~~~~~~~~~~~~~~~   76 (256)
T cd08530           5 LKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGS-----MSQKEREDAVNEIRILASVN--HP-NIISYKEAFLDGNKLCI   76 (256)
T ss_pred             eeeecCCCceeEEEEEECCCCCEEEEEEEehhh-----ccHHHHHHHHHHHHHHHhCC--CC-CchhhhhhhccCCEEEE
Confidence            567888988899999765 44 78888654222     12233456667777777765  23 23333  4456688899


Q ss_pred             EEecCCCCchHHHHHHHc----CCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIA----GIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~----g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |||+++  ...|.+.+..    +...     -.++.++...|+.+|...
T Consensus        77 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~  123 (256)
T cd08530          77 VMEYAP--FGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK  123 (256)
T ss_pred             EehhcC--CCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            999997  3466665544    2222     256778888888888664

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=95.71  E-value=0.22  Score=40.69  Aligned_cols=106  Identities=18%  Similarity=0.153  Sum_probs=69.9

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~  112 (165)
                      .++.+|.|....||++.+. +| .+++|.-...      . ....++...|..+|+....  |..++-+ ++.+.+...+
T Consensus        23 ~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~------~-~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~l   93 (297)
T cd06656          23 RFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQ------Q-QPKKELIINEILVMRENKN--PNIVNYLDSYLVGDELWV   93 (297)
T ss_pred             eeeeeccCCCeEEEEEEECCCCCEEEEEEEecC------c-cchHHHHHHHHHHHHhCCC--CCEeeEEEEEecCCEEEE
Confidence            5678999999999999874 45 8999964311      1 1223566677777776533  4434333 3446677889


Q ss_pred             EEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||+++  ...|.+.+.++...    ..++.++...|+.+|...
T Consensus        94 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~  135 (297)
T cd06656          94 VMEYLA--GGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQ  135 (297)
T ss_pred             eecccC--CCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999998  34676766554432    356677888888888653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=95.70  E-value=0.18  Score=40.51  Aligned_cols=106  Identities=13%  Similarity=0.100  Sum_probs=69.2

Q ss_pred             eeEeccCCceeEEEEEEeCC------C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEc
Q 045250           36 TIKEVGDGNLNFVYIVVGTS------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFD  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D  106 (165)
                      -++.+|.|....||++....      + .+++|........      ........|..+|+.+..  | ++.+++  +++
T Consensus        10 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~------~~~~~~~~e~~~l~~l~~--~-~i~~~~~~~~~   80 (277)
T cd05036          10 LLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSE------QDESDFLMEALIMSKFNH--Q-NIVRLIGVSFE   80 (277)
T ss_pred             eeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCH------HHHHHHHHHHHHHHhCCC--C-CEeeEEEEEcc
Confidence            45689999999999998753      3 6888866432211      112345567777776643  4 344444  556


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCC-------C-----HHHHHHHHHHHHHHHhcc
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLIAGIK-------Y-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~~g~~-------~-----~~~a~~iG~~La~~h~~t  152 (165)
                      .+...++||++.  ..+|++.+.....       .     -.++.+|...|+-+|...
T Consensus        81 ~~~~~lv~e~~~--g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  136 (277)
T cd05036          81 RLPRFILLELMA--GGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH  136 (277)
T ss_pred             CCCcEEEEecCC--CCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            677899999997  3577777655321       1     147788888888888663

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=95.69  E-value=0.14  Score=42.51  Aligned_cols=105  Identities=13%  Similarity=0.104  Sum_probs=63.8

Q ss_pred             eccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHH-HHhhccCCCCCceEE--EEcCCCceEE
Q 045250           39 EVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALAL-KEHGKLCPDHVPEVY--HFDRTMSLIG  113 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L-~~~~~~~p~~vP~v~--~~D~e~~~~v  113 (165)
                      .||.|....||++.+. +| .++||+-......    ..-...+...|...+ +.+.  -| ++++++  +.+.+...+|
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~~~e~~~~~~~l~--hp-~iv~~~~~~~~~~~~~lv   74 (323)
T cd05575           2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAIL----KKKEQKHIMAERNVLLKNVK--HP-FLVGLHYSFQTADKLYFV   74 (323)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHh----hhhHHHHHHHHHHHHHhhCC--CC-CCCCeeEEEEeCCEEEEE
Confidence            5788888999999986 45 7999975432110    111223344444432 2221  13 334443  3366778899


Q ss_pred             EecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t  152 (165)
                      |||++  ...|...+..+...+     .++.+|...|.-+|...
T Consensus        75 ~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~g  116 (323)
T cd05575          75 LDYVN--GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLN  116 (323)
T ss_pred             EcCCC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99998  346777666554332     36778889999999754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=95.69  E-value=0.21  Score=39.98  Aligned_cols=106  Identities=16%  Similarity=0.131  Sum_probs=68.8

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV--YHFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~e~~~  111 (165)
                      .+..+|.|...-||++.+. +| .++||.......   ..  -...+...|.+.|+.+..  |. +.++  ++.+.+...
T Consensus         4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~--~~~~~~~~E~~~l~~l~h--~~-i~~~~~~~~~~~~~~   75 (284)
T cd07860           4 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE---TE--GVPSTAIREISLLKELNH--PN-IVKLLDVIHTENKLY   75 (284)
T ss_pred             eeeeecCCCceEEEEEEECCCCCEEEEEEcccccc---cc--ccchHHHHHHHHHHhcCC--CC-CcchhhhcccCCcEE
Confidence            3677899999999999875 45 788886542221   11  122466778888888753  33 2222  234777889


Q ss_pred             EEEecCCCCchHHHHHHHc---CCCC----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIA---GIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~---g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +||||++ .  .++..+..   +...    -.++.++...|+-+|...
T Consensus        76 ~v~e~~~-~--~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~  120 (284)
T cd07860          76 LVFEFLH-Q--DLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR  120 (284)
T ss_pred             EEeeccc-c--CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997 2  45555544   2222    256778888899998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=95.67  E-value=0.25  Score=39.63  Aligned_cols=105  Identities=19%  Similarity=0.068  Sum_probs=68.1

Q ss_pred             eeEeccCCceeEEEEEEe-----CCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE----
Q 045250           36 TIKEVGDGNLNFVYIVVG-----TSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF----  105 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~-----~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~----  105 (165)
                      -++.+|.|+...||++..     .++ .++||.-.....       -...+...|.++|+.+..  |. +++++.+    
T Consensus         8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~-------~~~~~~~~e~~~l~~l~h--~~-iv~~~~~~~~~   77 (284)
T cd05081           8 FIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTA-------EHLRDFEREIEILKSLQH--DN-IVKYKGVCYSA   77 (284)
T ss_pred             eeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCH-------HHHHHHHHHHHHHHhCCC--CC-eeEEEEEEccC
Confidence            467899999999999873     234 788887442211       112456678888777642  43 4444432    


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250          106 DRTMSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~e~~~~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +.....+||||++  ..+|++.+.+..  ..    -.++.++...|+.+|...
T Consensus        78 ~~~~~~lv~e~~~--~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~  128 (284)
T cd05081          78 GRRNLRLVMEYLP--YGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKR  128 (284)
T ss_pred             CCCceEEEEEecC--CCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            2345679999998  457887776432  22    246788889999999764

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=95.66  E-value=0.18  Score=43.13  Aligned_cols=109  Identities=13%  Similarity=-0.002  Sum_probs=68.7

Q ss_pred             eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~  112 (165)
                      .+..+|.|....||++.... + .+.+|.-...-...    .-...+...|..+++....  |..++-. .+.+.....+
T Consensus        47 ~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~i~~~~~h--p~iv~~~~~~~~~~~~~l  120 (370)
T cd05621          47 VVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIK----RSDSAFFWEERDIMAFANS--PWVVQLFCAFQDDKYLYM  120 (370)
T ss_pred             EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh----hhhHHHHHHHHHHHHhCCC--CCEeeEEEEEEcCCEEEE
Confidence            56779999999999999863 4 67888754221110    0122345566667765432  4333322 2346667889


Q ss_pred             EEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      ||||++  ...|.+.+..+....    .++.+|...|.-+|...
T Consensus       121 v~Ey~~--gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~  162 (370)
T cd05621         121 VMEYMP--GGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMG  162 (370)
T ss_pred             EEcCCC--CCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999998  357777665544332    36678888888888754

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=95.65  E-value=0.23  Score=39.65  Aligned_cols=106  Identities=15%  Similarity=0.008  Sum_probs=68.6

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v  113 (165)
                      +..+|.|..+-||++.+. ++ .+++|.-..      ....-.......|.++++.+..  |..++-. ++.+.....+|
T Consensus         6 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~------~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~~v   77 (274)
T cd06609           6 LECIGKGSFGEVYKAIDKRTNQVVAIKVIDL------EEAEDEIEDIQQEIQFLSQCRS--PYITKYYGSFLKGSKLWII   77 (274)
T ss_pred             hhhhcCCCCeEEEEEEECCCCeEEEEEEeec------cccchHHHHHHHHHHHHHHcCC--CCeeeeeEEEEECCeEEEE
Confidence            356788888999999876 45 788887431      1111223455667777877762  4433333 34566677899


Q ss_pred             EecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  +..|.+.+..+...    -.++.+|...|.-+|...
T Consensus        78 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~  118 (274)
T cd06609          78 MEYCG--GGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEG  118 (274)
T ss_pred             EEeeC--CCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99998  45777777665433    246677777888888764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=95.64  E-value=0.26  Score=39.15  Aligned_cols=106  Identities=19%  Similarity=0.109  Sum_probs=69.5

Q ss_pred             eEeccCCceeEEEEEEeCC----C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCce
Q 045250           37 IKEVGDGNLNFVYIVVGTS----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSL  111 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~  111 (165)
                      .+.+|.|....||++...+    . .++||........      -..++...|...|+.+..  |..++-.-.+..+...
T Consensus        11 ~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~------~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~   82 (270)
T cd05056          11 GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSP------SVREKFLQEAYIMRQFDH--PHIVKLIGVITENPVW   82 (270)
T ss_pred             eeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCH------HHHHHHHHHHHHHHhCCC--CchhceeEEEcCCCcE
Confidence            4578888888999987532    2 6888876543311      123456667777777643  5544443334456677


Q ss_pred             EEEecCCCCchHHHHHHHcCC-CC-----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGI-KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~-~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  +..|++.+.... .+     -.++.++...|+-+|...
T Consensus        83 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~  127 (270)
T cd05056          83 IVMELAP--LGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKR  127 (270)
T ss_pred             EEEEcCC--CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999997  458888886643 21     246788899999999764

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=95.63  E-value=0.22  Score=39.30  Aligned_cols=104  Identities=20%  Similarity=0.015  Sum_probs=68.2

Q ss_pred             eccCCceeEEEEEEeC--C--C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEE
Q 045250           39 EVGDGNLNFVYIVVGT--S--G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIG  113 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~--~--g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~v  113 (165)
                      .||.|....||++...  +  + .+++|.-.....      .-..++...|..+|+.+..  |..++-.-.+..+...++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~------~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~v   73 (257)
T cd05060           2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHI------AAGKKEFLREASVMAQLDH--PCIVRLIGVCKGEPLMLV   73 (257)
T ss_pred             ccCccCceeEEEeEeeccCCCcceEEEEecccccc------hHHHHHHHHHHHHHHhcCC--CCeeeEEEEEcCCceEEE
Confidence            5788888999988643  2  2 688887553321      1123456677778876643  444443334455667899


Q ss_pred             EecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  ...|.+.+..+...     -.++.++...|+.+|...
T Consensus        74 ~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~  115 (257)
T cd05060          74 MELAP--LGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKH  115 (257)
T ss_pred             EEeCC--CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcC
Confidence            99997  34788888765522     357788888899888665

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=95.63  E-value=0.34  Score=39.24  Aligned_cols=105  Identities=14%  Similarity=0.175  Sum_probs=71.0

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      ....+|.|....||++.+. ++ .+++|...    .   .+.-..+....|...++.+..  | .+.+++  +.+.+...
T Consensus        23 ~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~----~---~~~~~~~~~~~e~~~l~~~~h--~-~vv~~~~~~~~~~~~~   92 (285)
T cd06648          23 NFVKIGEGSTGIVCIATDKSTGRQVAVKKMD----L---RKQQRRELLFNEVVIMRDYQH--P-NIVEMYSSYLVGDELW   92 (285)
T ss_pred             cceEeccCCCeEEEEEEECCCCCEEEEEEEe----c---cchhHHHHHHHHHHHHHHcCC--C-ChheEEEEEEcCCeEE
Confidence            5779999999999999865 44 79999631    1   111123344556667766642  3 333343  34678889


Q ss_pred             EEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      ++||+++  ..+|++.+..+....    .++.+|...|+-+|...
T Consensus        93 ~v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~  135 (285)
T cd06648          93 VVMEFLE--GGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQG  135 (285)
T ss_pred             EEEeccC--CCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999998  357888877765432    47788899999998754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=95.62  E-value=0.37  Score=39.41  Aligned_cols=105  Identities=11%  Similarity=0.051  Sum_probs=68.5

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      .++.+|.|....||++.+. ++ .+++|.-.....      .-...+...|.+.|+.+..  |. +.+++  +.+.+...
T Consensus        10 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~-iv~~~~~~~~~~~~~   80 (309)
T cd07872          10 KLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE------EGAPCTAIREVSLLKDLKH--AN-IVTLHDIVHTDKSLT   80 (309)
T ss_pred             EEEEecccCCEEEEEEEecCCCCeEEEEEeecccc------CCcchhHHHHHHHHHhCCC--CC-cceEEEEEeeCCeEE
Confidence            5678999999999999876 34 788897542211      1122356678888877643  33 23333  33567788


Q ss_pred             EEEecCCCCchHHHHHHHcC-CCC-----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAG-IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g-~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +||||++ .  .+.+.+... ...     ..++.+|...|+-+|...
T Consensus        81 lv~e~~~-~--~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~  124 (309)
T cd07872          81 LVFEYLD-K--DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRK  124 (309)
T ss_pred             EEEeCCC-C--CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998 2  455555442 221     246778899999999754

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=95.61  E-value=0.15  Score=40.32  Aligned_cols=107  Identities=14%  Similarity=0.027  Sum_probs=64.1

Q ss_pred             EeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEE
Q 045250           38 KEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLIG  113 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~v  113 (165)
                      +++|.|....||++.+. +| .++||.-....-.    -.-...+...|...+.....  ...+++++.+  +.+...+|
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~e~~~~~~~~~--~~~i~~~~~~~~~~~~~~lv   75 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMI----AKNQVTNVKAERAIMMIQGE--SPYVAKLYYSFQSKDYLYLV   75 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhh----HHHHHHHHHHHHHHHhhcCC--CCCeeeeeeeEEcCCeEEEE
Confidence            46888989999999875 44 7888864311100    00111233445444433222  2344555544  44567899


Q ss_pred             EecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||++  ...|.+.+..... .    -.++.+|...|.-+|...
T Consensus        76 ~e~~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~  117 (260)
T cd05611          76 MEYLN--GGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRG  117 (260)
T ss_pred             EeccC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99998  3577776655332 2    257788889999998754

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=95.61  E-value=0.24  Score=42.24  Aligned_cols=109  Identities=15%  Similarity=0.038  Sum_probs=68.6

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-DRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~e~~~~  112 (165)
                      .++.||.|....||++... +| .+++|+-...-...    .........|.++|+....  |..++-...+ +.....+
T Consensus        47 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~il~~~~h--~~iv~~~~~~~~~~~~~l  120 (370)
T cd05596          47 VIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIK----RSDSAFFWEERDIMAHANS--EWIVQLHYAFQDDKYLYM  120 (370)
T ss_pred             EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh----hhhHHHHHHHHHHHHhCCC--CCcceEEEEEecCCEEEE
Confidence            5677999999999999876 44 78889854221100    0122334567777776542  4444443333 4455679


Q ss_pred             EEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      ||||++  +..|.+.+..+....    .++.+|...|+-+|...
T Consensus       121 v~Ey~~--gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~  162 (370)
T cd05596         121 VMEYMP--GGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMG  162 (370)
T ss_pred             EEcCCC--CCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999998  346777665554332    35667888888888653

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=95.60  E-value=0.36  Score=38.97  Aligned_cols=106  Identities=14%  Similarity=0.102  Sum_probs=67.7

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      ....+|.|....||++.+. +| .+++|.-.....     ..--.++...|.+.|+.+..  |. +++++  +.+.....
T Consensus         6 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-----~~~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~~~~~~   77 (294)
T PLN00009          6 KVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE-----DEGVPSTAIREISLLKEMQH--GN-IVRLQDVVHSEKRLY   77 (294)
T ss_pred             EEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc-----cccchHHHHHHHHHHHhccC--CC-EeeEEEEEecCCeEE
Confidence            3567899999999999876 45 799996432110     01122455678888887743  33 33333  44678889


Q ss_pred             EEEecCCCCchHHHHHHHcCCC--C-----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIK--Y-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~--~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  . .+.+.+.....  .     -.++.+|...|.-+|...
T Consensus        78 lv~e~~~--~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  122 (294)
T PLN00009         78 LVFEYLD--L-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR  122 (294)
T ss_pred             EEEeccc--c-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999997  2 45555544221  1     246778888888888654

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=95.60  E-value=0.2  Score=42.74  Aligned_cols=109  Identities=14%  Similarity=0.056  Sum_probs=68.0

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-DRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~e~~~~  112 (165)
                      -++.+|.|....||++... ++ .+++|.-...-... .   -...+...|..+|+....  |..++-...+ +.....+
T Consensus        47 i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~-~---~~~~~~~~e~~i~~~~~h--p~iv~~~~~~~~~~~~~l  120 (371)
T cd05622          47 VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIK-R---SDSAFFWEERDIMAFANS--PWVVQLFYAFQDDRYLYM  120 (371)
T ss_pred             EEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhh-h---HHHHHHHHHHHHHHhCCC--CCCCeEEEEEEcCCEEEE
Confidence            5678999999999999886 34 78888754221110 0   112344556666665432  4444333233 5556779


Q ss_pred             EEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      ||||++  +..|.+.+..+....    .++.+|...|.-+|...
T Consensus       121 v~Ey~~--gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  162 (371)
T cd05622         121 VMEYMP--GGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMG  162 (371)
T ss_pred             EEcCCC--CCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999998  346777666554332    35678888888898653

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=95.58  E-value=0.27  Score=40.20  Aligned_cols=105  Identities=14%  Similarity=0.125  Sum_probs=69.4

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v  113 (165)
                      ...+|.|....||++... +| .++||...  ..   .  .-...+...|...|+.+..  |..++-. ++.+.+...++
T Consensus        25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~--~~---~--~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~lv   95 (292)
T cd06657          25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMD--LR---K--QQRRELLFNEVVIMRDYQH--ENVVEMYNSYLVGDELWVV   95 (292)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCeEEEEEEec--cc---c--hhHHHHHHHHHHHHHhcCC--cchhheeeEEEeCCEEEEE
Confidence            456899999999999874 55 79999632  11   1  1123455667777776653  3322222 45577889999


Q ss_pred             EecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  ...|++.+..+...    -.++.++...|+-+|...
T Consensus        96 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~g  136 (292)
T cd06657          96 MEFLE--GGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQG  136 (292)
T ss_pred             EecCC--CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99998  34677766555432    257778888888888753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=95.58  E-value=0.27  Score=38.67  Aligned_cols=106  Identities=20%  Similarity=0.143  Sum_probs=70.6

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~  112 (165)
                      .+.+|.|....||++.+. ++ .+++|.-..-     ...+-...+...|.++++.+..   ..+.+++.+  +.+...+
T Consensus         5 ~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~-----~~~~~~~~~~~~e~~~~~~l~~---~~i~~~~~~~~~~~~~~l   76 (264)
T cd06626           5 GNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQ-----DNDPKTIKEIADEMKVLELLKH---PNLVKYYGVEVHREKVYI   76 (264)
T ss_pred             eeEeecCCCcEEEEEEECCCCcEEEEEEEECc-----ccchHHHHHHHHHHHHHHhCCC---CChhheeeeEecCCEEEE
Confidence            467899999999999875 44 7888873211     1112334566677777776643   344455544  4567899


Q ss_pred             EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |||+++  ...|++.+.++...     -.++.++...|+.+|...
T Consensus        77 v~e~~~--~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~  119 (264)
T cd06626          77 FMEYCS--GGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHG  119 (264)
T ss_pred             EEecCC--CCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCC
Confidence            999998  45788877665322     246678888888888755

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=95.58  E-value=0.15  Score=41.06  Aligned_cols=104  Identities=16%  Similarity=0.082  Sum_probs=66.5

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v  113 (165)
                      ++.+|.|..+-||++... +| .+++|.......      .-...+...|.++|+.+..  |..++-. ++.+.....+|
T Consensus        10 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~i~~~~~~~~~~~~~~lv   81 (284)
T cd06620          10 ISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAK------SSVRKQILRELQIMHECRS--PYIVSFYGAFLNENNICMC   81 (284)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCc------chHHHHHHHHHHHHHHcCC--CCcceEeeeEecCCEEEEE
Confidence            457889999999999876 35 677776432111      1224567778888877642  3333322 44566788999


Q ss_pred             EecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHh
Q 045250          114 MRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLF  150 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~  150 (165)
                      |||++  ...|.+.+..... .    -.++.++...|.-+|.
T Consensus        82 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~  121 (284)
T cd06620          82 MEFMD--CGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYN  121 (284)
T ss_pred             EecCC--CCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            99998  3467666655332 2    2456677777777874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=95.55  E-value=0.06  Score=45.68  Aligned_cols=106  Identities=20%  Similarity=0.197  Sum_probs=70.8

Q ss_pred             EeccCCceeEEEEEEeCCC-eEEEEecC-------------ccccc-cCCCC-CCChHHHHHHHHHHHHhhccCCCCCce
Q 045250           38 KEVGDGNLNFVYIVVGTSG-SFVIKQAL-------------PYVRC-IGESW-PMTKERAYFEALALKEHGKLCPDHVPE  101 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~~g-svIvKqa~-------------p~~r~-~~~~~-~l~~~R~~~E~~~L~~~~~~~p~~vP~  101 (165)
                      .+||-|-=..||-+.+++| .++||.=+             .|++. ..-+| -++.-=+..|.++|+.+... ...||+
T Consensus        97 ~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~-G~~VP~  175 (304)
T COG0478          97 TKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPE-GVKVPK  175 (304)
T ss_pred             cccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhc-CCCCCC
Confidence            6678888888999999877 89988533             33321 11235 44444566777789888775 678999


Q ss_pred             EEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHH
Q 045250          102 VYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKT  148 (165)
Q Consensus       102 v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~  148 (165)
                      ++  |.+.|++|||++.  +..|+..=..-+..+.+...|-..++..
T Consensus       176 P~--~~nRHaVvMe~ie--G~eL~~~r~~~en~~~il~~il~~~~~~  218 (304)
T COG0478         176 PI--AWNRHAVVMEYIE--GVELYRLRLDVENPDEILDKILEEVRKA  218 (304)
T ss_pred             cc--ccccceeeeehcc--cceeecccCcccCHHHHHHHHHHHHHHH
Confidence            99  8889999999998  3455442223334456666665555544

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=95.53  E-value=0.32  Score=38.58  Aligned_cols=109  Identities=17%  Similarity=0.067  Sum_probs=67.9

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC--Cc
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRT--MS  110 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e--~~  110 (165)
                      .+.+|.|....||++.+. +| .+++|.-......  ..-.-...+...|.++|+.+..  |..+ +++.+  |.+  ..
T Consensus         7 ~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~~~~ei~~l~~l~h--~~i~-~~~~~~~~~~~~~~   81 (264)
T cd06653           7 GKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDS--QETSKEVNALECEIQLLKNLRH--DRIV-QYYGCLRDPEEKKL   81 (264)
T ss_pred             eeeEccCCCeEEEEEEEcCCCCEEEEEEEecCccc--chhhHHHHHHHHHHHHHHHcCC--CCcc-eEEEEEEcCCCCEE
Confidence            467888999999999875 45 7888974321111  1111233466678888887753  4433 33332  333  35


Q ss_pred             eEEEecCCCCchHHHHHHHcCC-CC----HHHHHHHHHHHHHHHhcc
Q 045250          111 LIGMRYLEPPHIILRKGLIAGI-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdl~~~~~~lr~~l~~g~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .++||+++  ...|.+.+.... ..    -.++.+|...|.-+|...
T Consensus        82 ~~v~e~~~--~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~  126 (264)
T cd06653          82 SIFVEYMP--GGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNM  126 (264)
T ss_pred             EEEEEeCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            78999997  456777666533 22    246778888888888554

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=95.53  E-value=0.18  Score=40.72  Aligned_cols=109  Identities=17%  Similarity=0.035  Sum_probs=70.3

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v  113 (165)
                      ++.+|.|....||++.+. +| .++||.-......  .....-..+...|.+.|+.+.  .|..++-. ++.+.....+|
T Consensus         5 ~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~~~~~~e~~~l~~~~--h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           5 GKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERK--EAKDGINFTALREIKLLQELK--HPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             eeeeeeccccEEEEEEECCCCcEEEEEEEeccccc--cccchhhHHHHHHHHHHhhcC--CCCChhhhheeecCCEEEEE
Confidence            356899999999999875 45 8999986544321  111122334556777777665  24444333 23344567899


Q ss_pred             EecCCCCchHHHHHHHcCC-CC-----HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIAGI-KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g~-~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++   ..|++.+.... ..     -.++.+|...|+-+|...
T Consensus        81 ~e~~~---~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  122 (298)
T cd07841          81 FEFME---TDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNW  122 (298)
T ss_pred             EcccC---CCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99995   26777776544 22     257788899999999765

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=95.51  E-value=0.35  Score=39.48  Aligned_cols=106  Identities=18%  Similarity=0.157  Sum_probs=67.4

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC--CC
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DR--TM  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~--e~  109 (165)
                      .+..+|.|....||++.+. +| .+++|.......  ..+...   +...|.++|+.+..  |. +.+++.+  +.  +.
T Consensus        11 ~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~--~~~~~~---~~~~E~~~l~~l~h--~~-i~~~~~~~~~~~~~~   82 (309)
T cd07845          11 KLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNE--RDGIPI---SSLREITLLLNLRH--PN-IVELKEVVVGKHLDS   82 (309)
T ss_pred             EeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccC--CCCCcc---hhhHHHHHHHhCCC--CC-CcceEEEEecCCCCe
Confidence            5667899999999999986 45 788896542211  112222   34458888877653  33 3333332  22  45


Q ss_pred             ceEEEecCCCCchHHHHHHHcCC--C----CHHHHHHHHHHHHHHHhcc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGI--K----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~--~----~~~~a~~iG~~La~~h~~t  152 (165)
                      ..+|||+++.   .+.+.+....  .    ...++.+|...|+.+|...
T Consensus        83 ~~lv~e~~~~---~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~  128 (309)
T cd07845          83 IFLVMEYCEQ---DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENF  128 (309)
T ss_pred             EEEEEecCCC---CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            7899999982   4555555422  1    1357888899999999865

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=95.50  E-value=0.24  Score=39.31  Aligned_cols=105  Identities=15%  Similarity=0.101  Sum_probs=70.1

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~  112 (165)
                      ++.++.|..+-||++... +| .+++|+-.....     .+-...+...|.++|+.+..  |. +.+++  ..+.....+
T Consensus         4 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-----~~~~~~~~~~e~~~l~~l~~--~~-i~~~~~~~~~~~~~~~   75 (283)
T cd05118           4 LGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE-----SEGIPKTALREIKLLKELNH--PN-IIKLLDVFRHKGDLYL   75 (283)
T ss_pred             ceeeecCCCceEEEEEcCCCCcEEEEEEeccccc-----cchhHHHHHHHHHHHHHhcC--CC-cchHHHhhccCCCEEE
Confidence            467888999999999876 45 799997543322     11234567778888887752  33 22233  346677889


Q ss_pred             EEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +||+++ .  .+.+.+...  ...    -.++.+|...|+.+|...
T Consensus        76 v~e~~~-~--~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~  118 (283)
T cd05118          76 VFEFMD-T--DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHG  118 (283)
T ss_pred             EEeccC-C--CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999997 2  566666553  222    257788899999998764

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=95.46  E-value=0.37  Score=38.43  Aligned_cols=107  Identities=16%  Similarity=0.146  Sum_probs=68.4

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v  113 (165)
                      +..++.|..+.||++.+. +| .+++|.-....     ....-......|..+|+.+..  |..++-+ ++.+.....+|
T Consensus         6 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~-----~~~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~~v   78 (286)
T cd07847           6 LSKIGEGSYGVVFKCRNRETGQIVAIKKFVESE-----DDPVIKKIALREIRMLKQLKH--PNLVNLIEVFRRKRKLHLV   78 (286)
T ss_pred             eeeecccCCeEEEEEEECCCCcEEEEEEEeecc-----cCccccHHHHHHHHHHHhCCC--CCEeeeeeEEeeCCEEEEE
Confidence            467899999999999886 45 78888643211     111122445678888877653  3322222 23355667899


Q ss_pred             EecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  ...|...+......     -.++.+|...|+-+|...
T Consensus        79 ~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~  120 (286)
T cd07847          79 FEYCD--HTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHN  120 (286)
T ss_pred             EeccC--ccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99998  35676665544322     257788888999999754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=95.45  E-value=0.28  Score=39.54  Aligned_cols=104  Identities=15%  Similarity=0.085  Sum_probs=63.3

Q ss_pred             ccCCceeEEEEEEeC-CC-eEEEEecCcc-ccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCCCceEEEe
Q 045250           40 VGDGNLNFVYIVVGT-SG-SFVIKQALPY-VRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-DRTMSLIGMR  115 (165)
Q Consensus        40 l~~Gn~N~v~rV~~~-~g-svIvKqa~p~-~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~e~~~~vME  115 (165)
                      ||.|....||++... +| .+.+|.-... ++.     .........|.++|+.+..  |..++-...+ +.....+|||
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~-----~~~~~~~~~E~~il~~l~h--p~i~~~~~~~~~~~~~~lv~e   73 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKK-----KSGEKMALLEKEILEKVNS--PFIVNLAYAFESKTHLCLVMS   73 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhc-----chhhHHHHHHHHHHHhcCC--CcEEEEEEEEecCCeEEEEEe
Confidence            567888889999875 45 7777865321 111     0111233458888887743  5444443333 4455679999


Q ss_pred             cCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 045250          116 YLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       116 dl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t  152 (165)
                      |++  +.+|++.+....   ..    -.++.+|...|+-+|...
T Consensus        74 ~~~--g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  115 (277)
T cd05607          74 LMN--GGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD  115 (277)
T ss_pred             cCC--CCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            998  346766654321   11    246678899999999643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=95.43  E-value=0.45  Score=37.76  Aligned_cols=106  Identities=15%  Similarity=0.026  Sum_probs=69.6

Q ss_pred             eEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcC--CCce
Q 045250           37 IKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDR--TMSL  111 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~--e~~~  111 (165)
                      ++.+|.|..+.||++...+ | .+++|.-......    + -.......|.+.|+.+.  .|..++-. +..+.  ....
T Consensus         4 ~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~----~-~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~~~   76 (287)
T cd07840           4 IAQIGEGTYGQVYKARNKKTGELVALKKIRMENEK----E-GFPITAIREIKLLQKLR--HPNIVRLKEIVTSKGKGSIY   76 (287)
T ss_pred             eEEeccCCCeEEEEEEECCCCeEEEEEEEeccccc----c-cchHHHHHHHHHHHhcc--CCCeeeheeeEecCCCCcEE
Confidence            5678999999999998864 5 7889987754311    1 11134556888888775  24444333 22233  6789


Q ss_pred             EEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+.+ .  .+.+.+...  ...    -.++.+|...|+-+|...
T Consensus        77 lv~e~~~-~--~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~  120 (287)
T cd07840          77 MVFEYMD-H--DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNG  120 (287)
T ss_pred             EEecccc-c--cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998 2  566666553  222    246778888899898764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=95.42  E-value=0.33  Score=40.49  Aligned_cols=107  Identities=16%  Similarity=0.114  Sum_probs=69.4

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~  111 (165)
                      .+..+|.|....||++.+. +| .++||.-......     .-.......|.++|+.+..  |..++-.-.|  +.....
T Consensus        14 ~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~E~~~l~~l~h--pniv~~~~~~~~~~~~~~   86 (328)
T cd07856          14 DLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFST-----PVLAKRTYRELKLLKHLRH--ENIISLSDIFISPLEDIY   86 (328)
T ss_pred             EEEeecccCCeEEEEEEECCCCCEEEEEEecccccc-----cchhHHHHHHHHHHHhcCC--CCeeeEeeeEecCCCcEE
Confidence            5788999999999999876 55 8899965432211     0112455568888877753  5444433323  245677


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ++||+++.   .+.+.+..+...    ..++.+|...|+.+|...
T Consensus        87 lv~e~~~~---~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~  128 (328)
T cd07856          87 FVTELLGT---DLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAG  128 (328)
T ss_pred             EEeehhcc---CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999972   466655544433    246778888898898765

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=95.41  E-value=0.28  Score=41.40  Aligned_cols=108  Identities=14%  Similarity=0.113  Sum_probs=70.3

Q ss_pred             eeEeccCCceeEEEEEEeC--CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCc
Q 045250           36 TIKEVGDGNLNFVYIVVGT--SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMS  110 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~--~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~  110 (165)
                      -++.+|.|....||++...  ++ .+++|.-....-.    -.-..++...|.++|+.+..  |..+ +++  +.+....
T Consensus        34 ~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~E~~~l~~l~h--p~Iv-~~~~~~~~~~~~  106 (340)
T PTZ00426         34 FIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKII----KQKQVDHVFSERKILNYINH--PFCV-NLYGSFKDESYL  106 (340)
T ss_pred             EEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhh----hhhhHHHHHHHHHHHHhCCC--CCCc-ceEEEEEeCCEE
Confidence            4688999999999999754  22 6888864321100    01223566778888877752  4433 333  3355567


Q ss_pred             eEEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 045250          111 LIGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdl~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t  152 (165)
                      .+||||++  ...|.+.+..+..++     .++.+|...|.-+|...
T Consensus       107 ~lv~Ey~~--~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  151 (340)
T PTZ00426        107 YLVLEFVI--GGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLN  151 (340)
T ss_pred             EEEEeCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            89999998  347777776655432     45678888888888754

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=95.40  E-value=0.2  Score=40.01  Aligned_cols=105  Identities=19%  Similarity=0.158  Sum_probs=66.5

Q ss_pred             eEeccCCceeEEEEEEeCC-------CeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC
Q 045250           37 IKEVGDGNLNFVYIVVGTS-------GSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DR  107 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~-------gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~  107 (165)
                      ++.+|.|....||++....       ..+++|.-.....      .-...+...|.+.|+.+..  |. +.+++.+  +.
T Consensus        10 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~------~~~~~~~~~ei~~l~~l~h--~~-i~~~~~~~~~~   80 (283)
T cd05048          10 LEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAE------PKVQQEFRQEAELMSDLQH--PN-IVCLLGVCTKE   80 (283)
T ss_pred             hhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCC------HHHHHHHHHHHHHHHhcCC--cc-cceEEEEEcCC
Confidence            5678889889999998642       1577776542211      1112345567777766542  33 3444443  55


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCC-----------------C----HHHHHHHHHHHHHHHhcc
Q 045250          108 TMSLIGMRYLEPPHIILRKGLIAGIK-----------------Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 e~~~~vMEdl~~~~~~lr~~l~~g~~-----------------~----~~~a~~iG~~La~~h~~t  152 (165)
                      ....++||+++  ..+|.+.+.....                 .    -.++.++...|+.+|...
T Consensus        81 ~~~~~~~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~  144 (283)
T cd05048          81 QPTCMLFEYLA--HGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH  144 (283)
T ss_pred             CceEEEEecCC--CCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            66789999997  3467777765321                 1    257889999999999764

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=95.40  E-value=0.39  Score=38.11  Aligned_cols=105  Identities=19%  Similarity=0.078  Sum_probs=68.8

Q ss_pred             eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH-FDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~e~~~~  112 (165)
                      -...+|.|....||++...+ + .+++|....      ..  ........|.++|+.+..  |..++-.-. .+.....+
T Consensus        10 ~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~------~~--~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~l   79 (263)
T cd05052          10 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE------DT--MEVEEFLKEAAVMKEIKH--PNLVQLLGVCTREPPFYI   79 (263)
T ss_pred             EeeecCCcccceEEEEEEecCCceEEEEEecC------Cc--hHHHHHHHHHHHHHhCCC--CChhheEEEEcCCCCcEE
Confidence            44678889888999988753 4 788886431      11  234566778888888743  544444322 34456679


Q ss_pred             EEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +||+++  ...|.+.+....   ..    -.++.++...|+-+|...
T Consensus        80 v~e~~~--~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~  124 (263)
T cd05052          80 ITEFMT--YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN  124 (263)
T ss_pred             EEEeCC--CCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999998  347777665422   22    135788899999999654

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=95.40  E-value=0.33  Score=38.48  Aligned_cols=106  Identities=17%  Similarity=0.012  Sum_probs=67.8

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~  112 (165)
                      -++.+|.|....||++.+. +| .+++|.......       -.......|..+|+.+..  |..++-. .+.+.+...+
T Consensus        13 ~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~-------~~~~~~~~e~~~l~~~~h--~~ii~~~~~~~~~~~~~i   83 (267)
T cd06646          13 LIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG-------DDFSLIQQEIFMVKECKH--CNIVAYFGSYLSREKLWI   83 (267)
T ss_pred             hhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc-------chHHHHHHHHHHHHhcCC--CCeeeeeEEEEeCCEEEE
Confidence            5677898999999999875 44 688887643321       112345567777776533  3322211 2346677789


Q ss_pred             EEecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||+++  ..+|.+.+.++.. .    -.++.++...|.-+|...
T Consensus        84 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  126 (267)
T cd06646          84 CMEYCG--GGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKG  126 (267)
T ss_pred             EEeCCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999998  3567666654332 2    246778888888888754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=95.40  E-value=0.13  Score=42.59  Aligned_cols=107  Identities=16%  Similarity=0.018  Sum_probs=67.5

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      -+..+|.|....||++.+. +| .+++|.-.......    .-...+...|..+|+...   ..++++++  +.+.+...
T Consensus         5 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~i~~~~~---~~~i~~~~~~~~~~~~~~   77 (330)
T cd05601           5 VKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLA----QETVSFFEEERDILSISN---SPWIPQLQYAFQDKDNLY   77 (330)
T ss_pred             EEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhh----hhHHHHHHHHHHHHHhCC---CCCCcceeeEEecCCeEE
Confidence            3577899999999999876 45 78888765322110    112344556666666543   23344443  33556678


Q ss_pred             EEEecCCCCchHHHHHHHcC--CCCH----HHHHHHHHHHHHHHhc
Q 045250          112 IGMRYLEPPHIILRKGLIAG--IKYP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g--~~~~----~~a~~iG~~La~~h~~  151 (165)
                      +||||++  ...|.+.+.+.  ....    .++.+|...|.-+|..
T Consensus        78 lv~e~~~--~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~  121 (330)
T cd05601          78 LVMEYQP--GGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQM  121 (330)
T ss_pred             EEECCCC--CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999997  34677766553  2222    3567888888888864

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=95.40  E-value=0.24  Score=39.04  Aligned_cols=104  Identities=16%  Similarity=-0.006  Sum_probs=67.1

Q ss_pred             eEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceEE
Q 045250           37 IKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~v  113 (165)
                      .+.+|.|....||++.+.++ .+.+|.-...-       .....+...|..+|+.+..  |. +.+++  ..+.+...++
T Consensus        11 ~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~e~~~l~~l~~--~~-i~~~~~~~~~~~~~~lv   80 (261)
T cd05148          11 ERKLGSGYFGEVWEGLWKNRVRVAIKILKSDD-------LLKQQDFQKEVQALKRLRH--KH-LISLFAVCSVGEPVYII   80 (261)
T ss_pred             hhhhccCCCccEEEeEecCCCcEEEEeccccc-------hhhHHHHHHHHHHHhcCCC--cc-hhheeeeEecCCCeEEE
Confidence            45678888899999998766 78888743211       1123455566667766642  33 33333  3566778899


Q ss_pred             EecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  ..+|.+.+.+.  ...     ..++.+|...|.-+|...
T Consensus        81 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~  124 (261)
T cd05148          81 TELME--KGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN  124 (261)
T ss_pred             Eeecc--cCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99998  34777777652  211     347778888888888654

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=95.39  E-value=0.15  Score=40.66  Aligned_cols=103  Identities=16%  Similarity=0.034  Sum_probs=63.4

Q ss_pred             eccCCceeEEEEEEeCC---C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 045250           39 EVGDGNLNFVYIVVGTS---G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLI  112 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~~---g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~  112 (165)
                      ++|.|....||++...+   + .+++|.-..-..      .-.......|..+|+.+..  |. +++++.  .+.....+
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~-iv~~~~~~~~~~~~~l   72 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS------VQEQMKFLEEAQPYRSLQH--SN-LLQCLGQCTEVTPYLL   72 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCCCC------hHHHHHHHHHHHHHHhCCC--CC-EeeEEEEEcCCCCcEE
Confidence            57888888899997542   2 578885432110      1112345557777776643  43 444443  35566789


Q ss_pred             EEecCCCCchHHHHHHHcCCC------C----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIK------Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~------~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||||++  ..+|++.+.....      .    -.++.++...|+-+|...
T Consensus        73 v~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  120 (269)
T cd05087          73 VMEFCP--LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN  120 (269)
T ss_pred             EEECCC--CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence            999998  3467776654221      1    146778888888888554

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=95.38  E-value=0.24  Score=41.50  Aligned_cols=106  Identities=18%  Similarity=0.207  Sum_probs=66.9

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecC-ccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc------
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQAL-PYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD------  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~-p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D------  106 (165)
                      .++.+|.|....||++.+. +| .++||... ++..      .-...+...|..+|+.+..  |..++-+-.|-      
T Consensus        20 ~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~   91 (353)
T cd07850          20 NLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQN------VTHAKRAYRELVLMKLVNH--KNIIGLLNVFTPQKSLE   91 (353)
T ss_pred             EEEEeccCCCEEEEEEEECCCCCEEEEEecCccccC------hhHHHHHHHHHHHHHhcCC--CCCcceeeeeccCCCcc
Confidence            4688999999999999876 45 89999643 1111      1123466678888877643  33333222221      


Q ss_pred             -CCCceEEEecCCCCchHHHHHHHcCC---CCHHHHHHHHHHHHHHHhcc
Q 045250          107 -RTMSLIGMRYLEPPHIILRKGLIAGI---KYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 -~e~~~~vMEdl~~~~~~lr~~l~~g~---~~~~~a~~iG~~La~~h~~t  152 (165)
                       .....+|||+++.   .+.+.+...-   ....++.++...|+.+|...
T Consensus        92 ~~~~~~lv~e~~~~---~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~g  138 (353)
T cd07850          92 EFQDVYLVMELMDA---NLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAG  138 (353)
T ss_pred             ccCcEEEEEeccCC---CHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             1235799999982   4555554331   11346888999999999764

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>PHA03212 serine/threonine kinase US3; Provisional

Probab=95.37  E-value=0.33  Score=41.92  Aligned_cols=98  Identities=12%  Similarity=0.086  Sum_probs=67.2

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      -++.+|.|....||++.+. .+ .+++|...             ..+...|+++|+.+..  |..+ +++  +.+.....
T Consensus        96 ~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-------------~~~~~~E~~il~~l~H--pnIv-~~~~~~~~~~~~~  159 (391)
T PHA03212         96 ILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-------------RGGTATEAHILRAINH--PSII-QLKGTFTYNKFTC  159 (391)
T ss_pred             EEEEEcCCCCeEEEEEEECCCCCEEEEechh-------------hhhhHHHHHHHHhCCC--CCCC-CEeEEEEECCeeE
Confidence            5678999999999999886 34 78888421             1355779999988753  4433 333  23456678


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ++||+++.   .|...+......     -.++.+|...|+-+|...
T Consensus       160 lv~e~~~~---~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~  202 (391)
T PHA03212        160 LILPRYKT---DLYCYLAAKRNIAICDILAIERSVLRAIQYLHENR  202 (391)
T ss_pred             EEEecCCC---CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999972   455555443322     256788889999999754

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=95.37  E-value=0.33  Score=38.93  Aligned_cols=105  Identities=13%  Similarity=0.029  Sum_probs=66.1

Q ss_pred             ccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EEcCCCceEEEec
Q 045250           40 VGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY-HFDRTMSLIGMRY  116 (165)
Q Consensus        40 l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~D~e~~~~vMEd  116 (165)
                      +|.|...-||++.+. +| .+++|.-.... ...   .....+...|.++|+.+.  .|..++-.. +-+.+...+||||
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~-~~~---~~~~~~~~~e~~~l~~l~--~~~i~~~~~~~~~~~~~~lv~e~   74 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKR-LKK---RKGEQMALNEKKILEKVS--SRFIVSLAYAFETKDDLCLVMTL   74 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhh-hhh---hhhhHHHHHHHHHHHhCC--CCCEeeeeeEEecCCeEEEEEec
Confidence            466777889999765 45 78888654321 100   012234456888888876  355444432 2355678899999


Q ss_pred             CCCCchHHHHHHHcCC--CCH-----HHHHHHHHHHHHHHhcc
Q 045250          117 LEPPHIILRKGLIAGI--KYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       117 l~~~~~~lr~~l~~g~--~~~-----~~a~~iG~~La~~h~~t  152 (165)
                      ++  ...|++.+.+..  .++     .++.++...|.-+|...
T Consensus        75 ~~--~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~  115 (277)
T cd05577          75 MN--GGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR  115 (277)
T ss_pred             CC--CCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            98  457887776533  222     35678888888888764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=95.37  E-value=0.45  Score=38.33  Aligned_cols=109  Identities=16%  Similarity=0.088  Sum_probs=68.8

Q ss_pred             CCcc-eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--
Q 045250           32 FDDL-TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD--  106 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--  106 (165)
                      .+++ .+..++.|...-||++... ++ .+++|.-.+.-        ...++...|...++.+... | .+++++.+-  
T Consensus        21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~--------~~~~~~~~e~~~l~~l~~h-~-ni~~~~~~~~~   90 (291)
T cd06639          21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS--------DVDEEIEAEYNILQSLPNH-P-NVVKFYGMFYK   90 (291)
T ss_pred             CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc--------cHHHHHHHHHHHHHHhcCC-C-CeEEEEEEEEe
Confidence            3444 5567899999999999885 44 68888654221        1235666777777766432 3 445555432  


Q ss_pred             -----CCCceEEEecCCCCchHHHHHHH----cCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          107 -----RTMSLIGMRYLEPPHIILRKGLI----AGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 -----~e~~~~vMEdl~~~~~~lr~~l~----~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                           .....+||||++  ..+|++.+.    .+...     -.++.++...|..+|...
T Consensus        91 ~~~~~~~~~~lv~ey~~--~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  148 (291)
T cd06639          91 ADKLVGGQLWLVLELCN--GGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR  148 (291)
T ss_pred             ccccCCCeeEEEEEECC--CCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence                 134789999998  346666543    23322     236778888888899754

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=95.36  E-value=0.062  Score=45.20  Aligned_cols=106  Identities=15%  Similarity=0.145  Sum_probs=66.6

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      .++.||.|....||++... +| .++||.-.....      .....+...|.++|+.+..  |. +.+++  +.+.....
T Consensus        78 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~-iv~~~~~~~~~~~~~  148 (353)
T PLN00034         78 RVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHE------DTVRRQICREIEILRDVNH--PN-VVKCHDMFDHNGEIQ  148 (353)
T ss_pred             hhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCc------HHHHHHHHHHHHHHHhCCC--CC-cceeeeEeccCCeEE
Confidence            4567999999999999875 45 899997532211      1123466778888877642  33 33333  33445667


Q ss_pred             EEEecCCCCchHHHHHHHcCC-CCHHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGI-KYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~-~~~~~a~~iG~~La~~h~~t  152 (165)
                      +||||+. .. .|+....... ....++.+|...|.-+|...
T Consensus       149 lv~e~~~-~~-~L~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  188 (353)
T PLN00034        149 VLLEFMD-GG-SLEGTHIADEQFLADVARQILSGIAYLHRRH  188 (353)
T ss_pred             EEEecCC-CC-cccccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8999998 33 4433221111 12368889999999999754

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=95.35  E-value=0.16  Score=43.31  Aligned_cols=83  Identities=17%  Similarity=0.067  Sum_probs=53.8

Q ss_pred             eEeccCCceeEEEEEEe------CCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcC
Q 045250           37 IKEVGDGNLNFVYIVVG------TSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDR  107 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~------~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~  107 (165)
                      .+.||.|....||++..      .++ .+.||.-.+....      -..++...|.++|+.+..+ | ++++++  +.+.
T Consensus        40 ~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~------~~~~~~~~Ei~il~~l~~H-p-nIv~l~~~~~~~  111 (375)
T cd05104          40 GKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHL------TEREALMSELKVLSYLGNH-I-NIVNLLGACTVG  111 (375)
T ss_pred             hheecCCccceEEEEEEeccccCccceeEEEEeccCCcCc------HHHHHHHHHHHHHHHhcCC-c-ceeeeeeeeccC
Confidence            46789999999999863      123 6888876543221      1235667788888877543 3 333443  3466


Q ss_pred             CCceEEEecCCCCchHHHHHHH
Q 045250          108 TMSLIGMRYLEPPHIILRKGLI  129 (165)
Q Consensus       108 e~~~~vMEdl~~~~~~lr~~l~  129 (165)
                      +...+||||++  +.+|.+.+.
T Consensus       112 ~~~~lv~E~~~--~g~L~~~l~  131 (375)
T cd05104         112 GPTLVITEYCC--YGDLLNFLR  131 (375)
T ss_pred             Ccceeeehhcc--CCcHHHHHH
Confidence            77889999998  335555554

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=95.35  E-value=0.088  Score=41.56  Aligned_cols=104  Identities=18%  Similarity=0.085  Sum_probs=68.1

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCce-EEEEcCCCceEE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPE-VYHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~-v~~~D~e~~~~v  113 (165)
                      ++.+|.|...-||++.+. ++ .+++|.-....      -.....+...|.+.|+...  -|..++- -.+.+.....++
T Consensus         6 ~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~------~~~~~~~~~~e~~~l~~~~--~~~i~~~~~~~~~~~~~~lv   77 (265)
T cd06605           6 LGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEI------NEAIQKQILRELDILHKCN--SPYIVGFYGAFYNNGDISIC   77 (265)
T ss_pred             HHHhcCCCCeEEEEEEEcCCCcEEEEEEEeccc------ChHHHHHHHHHHHHHHHCC--CCchhhhheeeecCCEEEEE
Confidence            345788888889999886 34 78888643221      1122345667777777665  2433221 134567888999


Q ss_pred             EecCCCCchHHHHHHHcC-CCC-----HHHHHHHHHHHHHHHh
Q 045250          114 MRYLEPPHIILRKGLIAG-IKY-----PLLAEHMSEFMAKTLF  150 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g-~~~-----~~~a~~iG~~La~~h~  150 (165)
                      ||+++  ...|++.+... ..+     ..++.++...|+.+|.
T Consensus        78 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~  118 (265)
T cd06605          78 MEYMD--GGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHE  118 (265)
T ss_pred             EEecC--CCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcC
Confidence            99998  45787777654 222     2577888899999997

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=95.35  E-value=0.27  Score=40.77  Aligned_cols=106  Identities=12%  Similarity=0.057  Sum_probs=63.0

Q ss_pred             eccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHH-HHHhhccCCCCCceE-EEEcCCCceEEE
Q 045250           39 EVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALA-LKEHGKLCPDHVPEV-YHFDRTMSLIGM  114 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~-L~~~~~~~p~~vP~v-~~~D~e~~~~vM  114 (165)
                      .||.|....||++... +| .+.||.-.......    .-...+...|... ++...  -|..++-. .+.+.+...+||
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~~l~~~~--hp~iv~~~~~~~~~~~~~lv~   75 (325)
T cd05604           2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLN----RKEQKHIMAERNVLLKNVK--HPFLVGLHYSFQTTEKLYFVL   75 (325)
T ss_pred             ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh----hhHHHHHHHHHHHHHHhCC--CCCCccEEEEEecCCEEEEEE
Confidence            4788889999999875 45 78889765432211    0112233344433 22221  14333332 233567788999


Q ss_pred             ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 Edl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||++ + ..|...+..+...     -.++.+|...|+-+|...
T Consensus        76 e~~~-~-~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~g  116 (325)
T cd05604          76 DFVN-G-GELFFHLQRERSFPEPRARFYAAEIASALGYLHSIN  116 (325)
T ss_pred             cCCC-C-CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9998 3 4566666554432     246778899999999755

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=95.34  E-value=0.41  Score=37.63  Aligned_cols=105  Identities=16%  Similarity=0.101  Sum_probs=68.3

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~  112 (165)
                      .+.+|.|...-||++.+. ++ .+++|.-.-..      -.-..++...|...|+.+..  |. +++++  +.+.....+
T Consensus         5 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~------~~~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~~~~~~l   75 (255)
T cd08219           5 LRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK------SSSAVEDSRKEAVLLAKMKH--PN-IVAFKESFEADGHLYI   75 (255)
T ss_pred             EEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc------chHHHHHHHHHHHHHHhCCC--CC-cceEEEEEEECCEEEE
Confidence            567899999999999876 34 78888743111      01234677778888876643  33 33333  346677889


Q ss_pred             EEecCCCCchHHHHHHHc--CCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIA--GIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~--g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||++  +..+.+.+..  +..+     -.++.+|...|..+|...
T Consensus        76 v~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~  120 (255)
T cd08219          76 VMEYCD--GGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR  120 (255)
T ss_pred             EEeeCC--CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            999998  3456665543  2222     246788899999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=95.32  E-value=0.29  Score=40.60  Aligned_cols=106  Identities=12%  Similarity=0.030  Sum_probs=62.5

Q ss_pred             ccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhc-cCCCCCceEEE--EcCCCceEEE
Q 045250           40 VGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGK-LCPDHVPEVYH--FDRTMSLIGM  114 (165)
Q Consensus        40 l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~-~~p~~vP~v~~--~D~e~~~~vM  114 (165)
                      ||.|...-||++.+. +| .++||......-. .   .-...+...|..+++...- -.|. ++.++.  .+.....+||
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~---~~~~~~~~~e~~~l~~~~~~~~p~-i~~~~~~~~~~~~~~lv~   75 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIV-A---KKEVAHTIGERNILVRTLLDESPF-IVGLKFSFQTDSDLYLVT   75 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHh-h---hhHHHHHHHHHHHHHHhccCCCCc-CcceEEEEecCCeEEEEE
Confidence            567888889999876 45 7888875321100 0   0122344456666554431 1233 333332  3566789999


Q ss_pred             ecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          115 RYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 Edl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      ||++ + ..|...+.....+ .    .++.+|...|+-+|...
T Consensus        76 e~~~-~-g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~  116 (330)
T cd05586          76 DYMS-G-GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYD  116 (330)
T ss_pred             cCCC-C-ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9998 3 3566666554432 2    45678888888888754

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=95.32  E-value=0.18  Score=42.33  Aligned_cols=107  Identities=17%  Similarity=0.156  Sum_probs=65.6

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC------
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR------  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~------  107 (165)
                      .++.||.|....||++.+. .| .++||.-..-...     .-...+...|..+|+.+..  |..++-.-.|..      
T Consensus        25 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~   97 (359)
T cd07876          25 QLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQN-----QTHAKRAYRELVLLKCVNH--KNIISLLNVFTPQKSLEE   97 (359)
T ss_pred             EEEEeecCCCEEEEEEEEcCCCceeEEEEecccccc-----hhHHHHHHHHHHHHHhCCC--CCEeeeeeeeccCCCccc
Confidence            4688999999999999875 45 7999975321110     1223566678887776642  332222222222      


Q ss_pred             -CCceEEEecCCCCchHHHHHHHcCCC---CHHHHHHHHHHHHHHHhcc
Q 045250          108 -TMSLIGMRYLEPPHIILRKGLIAGIK---YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 -e~~~~vMEdl~~~~~~lr~~l~~g~~---~~~~a~~iG~~La~~h~~t  152 (165)
                       ....+|||+++.   .+.+.+...-.   ...++.+|...|+-+|...
T Consensus        98 ~~~~~lv~e~~~~---~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~  143 (359)
T cd07876          98 FQDVYLVMELMDA---NLCQVIHMELDHERMSYLLYQMLCGIKHLHSAG  143 (359)
T ss_pred             cceeEEEEeCCCc---CHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             234799999983   34444432211   1357788999999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=95.30  E-value=0.2  Score=41.44  Aligned_cols=106  Identities=9%  Similarity=-0.022  Sum_probs=64.1

Q ss_pred             EeccCC--ceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 045250           38 KEVGDG--NLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        38 ~~l~~G--n~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~  112 (165)
                      ..||.|  ....||++... +| .++||.-..-..     ..-..+....|.++|+.+..  |..++-. ++.+.+...+
T Consensus         4 ~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~e~~~l~~l~h--pniv~~~~~~~~~~~~~l   76 (327)
T cd08227           4 TVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC-----TNEMVTFLQGELHVSKLFNH--PNIVPYRATFIADNELWV   76 (327)
T ss_pred             hhccccccceEEEEEEeecccCcEEEEEEechhhc-----cHHHHHHHHHHHHHHHhcCC--CCeeeEEEEEEECCEEEE
Confidence            456777  45678898775 55 788897432110     00112334457777776532  4443322 3456677889


Q ss_pred             EEecCCCCchHHHHHHHcC--C-CC----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAG--I-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g--~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||||++  +..+++.+...  . ..    -.++.+|...|+-+|...
T Consensus        77 v~e~~~--~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~  121 (327)
T cd08227          77 VTSFMA--YGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG  121 (327)
T ss_pred             EEeccC--CCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999998  45777766432  2 22    247788888999998654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=95.30  E-value=0.35  Score=38.74  Aligned_cols=106  Identities=14%  Similarity=0.067  Sum_probs=65.3

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-e----EEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCC
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-S----FVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-DRT  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-s----vIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~e  108 (165)
                      .++.+|.|....||++... +| .    +.+|.-.....      .-...+...|...++.+.   ..+++.++.+ ...
T Consensus        11 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~------~~~~~~~~~e~~~l~~~~---~~~i~~~~~~~~~~   81 (279)
T cd05109          11 KVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS------PKANKEILDEAYVMAGVG---SPYVCRLLGICLTS   81 (279)
T ss_pred             eeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCC------HHHHHHHHHHHHHHHhcC---CCCCceEEEEEcCC
Confidence            5788999999999999753 44 2    55666542211      111234445555555443   2344444433 345


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCC-C-----HHHHHHHHHHHHHHHhcc
Q 045250          109 MSLIGMRYLEPPHIILRKGLIAGIK-Y-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdl~~~~~~lr~~l~~g~~-~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ...++||+++  ...+.+.+.++.. +     -.++.+|...|+-+|...
T Consensus        82 ~~~l~~~~~~--~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~  129 (279)
T cd05109          82 TVQLVTQLMP--YGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVR  129 (279)
T ss_pred             CcEEEEEcCC--CCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            5678999998  3467777765432 2     257888999999999765

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=95.30  E-value=0.5  Score=37.54  Aligned_cols=106  Identities=13%  Similarity=-0.005  Sum_probs=67.0

Q ss_pred             eeEeccCCceeEEEEEEeCC-C----eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCC
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRT  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e  108 (165)
                      -.+.+|.|....||++.... |    .+.||.......      .-...+...|..+|+.+..  |. +.+++.  .+.+
T Consensus         8 ~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~e~~~l~~l~h--~n-i~~~~~~~~~~~   78 (269)
T cd05065           8 IEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYT------EKQRRDFLSEASIMGQFDH--PN-IIHLEGVVTKSR   78 (269)
T ss_pred             EEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCC------HHHHHHHHHHHHHHHhCCC--cC-cceEEEEECCCC
Confidence            35678999999999998752 2    488888653211      0112456667777776632  43 333433  3556


Q ss_pred             CceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250          109 MSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ...+|||+++  ...|.+.+..+.  ..    -.++.++...|+-+|...
T Consensus        79 ~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g  126 (269)
T cd05065          79 PVMIITEFME--NGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMN  126 (269)
T ss_pred             ceEEEEecCC--CCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            6688999998  346777765432  22    245677788888888654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=95.29  E-value=0.52  Score=35.69  Aligned_cols=105  Identities=19%  Similarity=0.079  Sum_probs=69.6

Q ss_pred             eEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250           37 IKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v  113 (165)
                      .+.++.|...-||++...+ + .+++|.......     + -...+...|.+.++.+..  |..++-+ +..+.....++
T Consensus         4 ~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-----~-~~~~~~~~e~~~~~~~~~--~~i~~~~~~~~~~~~~~~v   75 (225)
T smart00221        4 GKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKT-----E-KQREEFLREIRILKKLKH--PNIVKLYGVFEDPEPLYLV   75 (225)
T ss_pred             eeEeecCCCeEEEEEEEcCCCcEEEEEeeccccc-----h-HHHHHHHHHHHHHHhCCC--CChhhheeeeecCCceEEE
Confidence            4678888888999999875 4 899998663221     1 134577778888877732  4333322 22344778899


Q ss_pred             EecCCCCchHHHHHHHcCCC--C----HHHHHHHHHHHHHHHhc
Q 045250          114 MRYLEPPHIILRKGLIAGIK--Y----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g~~--~----~~~a~~iG~~La~~h~~  151 (165)
                      ||+++  ..+|.+.+.....  .    ..++.++...|+.+|..
T Consensus        76 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~  117 (225)
T smart00221       76 MEYCE--GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSL  117 (225)
T ss_pred             EeccC--CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99998  3477776655332  1    35677788888888876

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=95.27  E-value=0.36  Score=38.34  Aligned_cols=103  Identities=15%  Similarity=0.087  Sum_probs=64.4

Q ss_pred             eccCCceeEEEEEEeCCC----eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250           39 EVGDGNLNFVYIVVGTSG----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~~g----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~  112 (165)
                      ++|.|...-||++...++    .+++|+......   .   -...+...|.+.++.+..  |. +.+++  ..+.....+
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~---~---~~~~~~~~e~~~~~~l~h--~n-ii~~~~~~~~~~~~~l   72 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASAT---P---DEQLLFLQEVQPYRELNH--PN-VLQCLGQCIESIPYLL   72 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCC---h---HHHHHHHHHHHHHHhCCC--CC-cceEEEEECCCCceEE
Confidence            588999999999865432    678887542211   0   112334556666665432  33 44444  345677899


Q ss_pred             EEecCCCCchHHHHHHHcCCC------C----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIK------Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~------~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||+++  ...|++.+.....      .    -.++.+|...|+-+|...
T Consensus        73 v~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  120 (269)
T cd05042          73 VLEFCP--LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD  120 (269)
T ss_pred             EEEeCC--CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC
Confidence            999997  4577777765321      1    256778888889899765

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=95.27  E-value=0.2  Score=42.55  Aligned_cols=108  Identities=15%  Similarity=0.049  Sum_probs=68.4

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      .++.||.|....||++.+. ++ .+.||.-...--.    ..-...+...|.++|+.+..  |. +++++  +.+.+...
T Consensus         5 ~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~----~~~~~~~~~~E~~il~~~~h--~~-iv~~~~~~~~~~~~~   77 (382)
T cd05625           5 KIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVL----LRNQVAHVKAERDILAEADN--EW-VVRLYYSFQDKDNLY   77 (382)
T ss_pred             EEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhh----hHHHHHHHHHHHHHHHhCCC--Cc-CCeEEEEEEeCCEEE
Confidence            5788999999999999875 34 6888865421100    01112456678778876643  33 33333  34566789


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      +||||++ + ..|.+.+.+...+ .    .++.+|...|.-+|...
T Consensus        78 lv~E~~~-g-g~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~  121 (382)
T cd05625          78 FVMDYIP-G-GDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMG  121 (382)
T ss_pred             EEEeCCC-C-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999998 3 3666666554433 2    34567778888888754

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=95.26  E-value=0.45  Score=36.96  Aligned_cols=107  Identities=18%  Similarity=0.017  Sum_probs=70.9

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v  113 (165)
                      .+.+|.|...-||++.+. ++ .+++|.-......     .-..++...|.++|+.+..  |..++-. ++.+.....++
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~~v   77 (254)
T cd06627           5 GDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK-----EEALKSIMQEIDLLKNLKH--PNIVKYIGSIETSDSLYII   77 (254)
T ss_pred             eeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC-----HHHHHHHHHHHHHHHhCCC--CCccEEEEEEEeCCEEEEE
Confidence            467899999999999876 34 7888877643210     1234566777778777642  4433322 34556677899


Q ss_pred             EecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  ...|.+.+..... .    -.++.++...|+-+|...
T Consensus        78 ~e~~~--~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~  119 (254)
T cd06627          78 LEYAE--NGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQG  119 (254)
T ss_pred             EecCC--CCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            99997  3588777765332 2    256778888888888654

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=95.25  E-value=0.34  Score=39.46  Aligned_cols=108  Identities=14%  Similarity=-0.013  Sum_probs=70.1

Q ss_pred             eeEeccCCceeEEEEEEeC--------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-E
Q 045250           36 TIKEVGDGNLNFVYIVVGT--------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH-F  105 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~--------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~  105 (165)
                      -.+++|.|....||++...        ++ .+++|........      -...+...|..+|+.+... |..++-+-. .
T Consensus        19 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~------~~~~~~~~E~~~l~~l~~h-~~i~~~~~~~~   91 (304)
T cd05101          19 LGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATE------KDLSDLVSEMEMMKMIGKH-KNIINLLGACT   91 (304)
T ss_pred             ecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccch------HHHHHHHHHHHHHHhhccC-CCchheeEEEe
Confidence            3478999999999988631        22 6888876543211      1235677888888877554 544443322 2


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcCCC---------------------CHHHHHHHHHHHHHHHhcc
Q 045250          106 DRTMSLIGMRYLEPPHIILRKGLIAGIK---------------------YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~e~~~~vMEdl~~~~~~lr~~l~~g~~---------------------~~~~a~~iG~~La~~h~~t  152 (165)
                      +.....++||+++  ..+|++.+.+...                     .-.++.+|...|+-+|...
T Consensus        92 ~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g  157 (304)
T cd05101          92 QDGPLYVIVEYAS--KGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK  157 (304)
T ss_pred             cCCceEEEEecCC--CCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC
Confidence            4445669999998  3478777765321                     1245778999999999764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=95.23  E-value=0.2  Score=41.68  Aligned_cols=105  Identities=16%  Similarity=0.163  Sum_probs=68.5

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE------cCC
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF------DRT  108 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~------D~e  108 (165)
                      .+.+|.|....||++.+. +| .+++|.-....     .-.-...+...|..+|+.+..  |. +++++.+      +..
T Consensus        10 ~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~-----~~~~~~~~~~~e~~~l~~l~h--~~-iv~~~~~~~~~~~~~~   81 (334)
T cd07855          10 IENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAF-----DVPTLAKRTLRELKILRHFKH--DN-IIAIRDILRPPGADFK   81 (334)
T ss_pred             eeeeecCCCeEEEEEEEcCCCCEEEEEEecccc-----ccccchHHHHHHHHHHHhcCC--CC-ccCHHHhccccCCCCc
Confidence            467899999999999876 45 88888643211     111234566678888888762  33 3332221      334


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          109 MSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ...+|||+++ +  .+.+.+..+...     -.++.+|...|+-+|...
T Consensus        82 ~~~lv~e~~~-~--~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  127 (334)
T cd07855          82 DVYVVMDLME-S--DLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSAN  127 (334)
T ss_pred             eEEEEEehhh-h--hHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            5679999997 3  677777655432     257778888999999765

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=95.23  E-value=0.31  Score=38.89  Aligned_cols=104  Identities=17%  Similarity=0.090  Sum_probs=65.7

Q ss_pred             eccCCceeEEEEEEeCC-C---eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 045250           39 EVGDGNLNFVYIVVGTS-G---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLI  112 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~~-g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~  112 (165)
                      .+|.|....||++.+.+ |   .+.+|.-.....      .-...+...|.+.|+.+... |..+ +++.  .+.....+
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~E~~~l~~l~~h-~~iv-~~~~~~~~~~~~~l   73 (270)
T cd05047           2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS------KDDHRDFAGELEVLCKLGHH-PNII-NLLGACEHRGYLYL   73 (270)
T ss_pred             cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCC------HHHHHHHHHHHHHHHhhccC-CCee-eEEEEEecCCCceE
Confidence            47888888999998753 3   356666543321      12235677788888877553 4433 3432  23345679


Q ss_pred             EEecCCCCchHHHHHHHcCCC----------------C-----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIK----------------Y-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~----------------~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +||+++ + .+|.+.+.+...                .     -.++.++...|+-+|...
T Consensus        74 v~e~~~-~-~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~  132 (270)
T cd05047          74 AIEYAP-H-GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ  132 (270)
T ss_pred             EEEeCC-C-CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999998 3 477777765321                1     246778888899899753

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=95.19  E-value=0.61  Score=36.82  Aligned_cols=110  Identities=15%  Similarity=0.054  Sum_probs=66.4

Q ss_pred             EeccCCceeEEEEEEeC-CC-eEEEEecCccccccCC-CC-CCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           38 KEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGE-SW-PMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~-~~-~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      ..+|.|..+-||++.+. ++ .+++|.-......... .+ .--.++...|..+|+.+..  | .+++++.  .+.+...
T Consensus         6 ~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~~~~   82 (267)
T cd06628           6 ALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQH--E-NIVQYLGSSLDADHLN   82 (267)
T ss_pred             ceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCC--C-CeeeEEEEEEeCCccE
Confidence            46788889999999875 34 7888865432211000 00 0011344566667766642  3 3444443  3667888


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ++||+++  ...|.+.+......     -.++.++...|..+|...
T Consensus        83 lv~e~~~--~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~  126 (267)
T cd06628          83 IFLEYVP--GGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRG  126 (267)
T ss_pred             EEEEecC--CCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcC
Confidence            9999997  34677766553322     256788888888888543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=95.18  E-value=0.53  Score=37.41  Aligned_cols=105  Identities=14%  Similarity=-0.007  Sum_probs=65.4

Q ss_pred             eEeccCCceeEEEEEEeC--C--C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCC
Q 045250           37 IKEVGDGNLNFVYIVVGT--S--G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTM  109 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~--~--g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~  109 (165)
                      .+.+|.|....||++...  +  + .+++|...+....      -...+...|..+|+.+..  |. +++++.  .+.+.
T Consensus         9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~------~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~~~~   79 (267)
T cd05066           9 EKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTE------KQRRDFLSEASIMGQFDH--PN-IIHLEGVVTKSKP   79 (267)
T ss_pred             eeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCH------HHHHHHHHHHHHHHhCCC--CC-cceEEEEEecCCc
Confidence            567899999999998763  1  2 5888876532210      112345556667766532  43 333333  25566


Q ss_pred             ceEEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ..+|||+++  ..+|.+.+...  ...    -.++.++...|+.+|...
T Consensus        80 ~~lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~  126 (267)
T cd05066          80 VMIVTEYME--NGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMG  126 (267)
T ss_pred             cEEEEEcCC--CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            778999998  34777776553  222    246678888888898653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=95.17  E-value=0.58  Score=38.20  Aligned_cols=106  Identities=18%  Similarity=0.138  Sum_probs=69.3

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~  112 (165)
                      .++.+|.|....||++.+. +| .+++|+-..       ...-..++...|.+.++.+..  |..++-+ ++.+.+...+
T Consensus        23 ~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~-------~~~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~l   93 (296)
T cd06655          23 RYEKIGQGASGTVFTAIDVATGQEVAIKQINL-------QKQPKKELIINEILVMKELKN--PNIVNFLDSFLVGDELFV   93 (296)
T ss_pred             EEEEEecCCCeEEEEEEEcCCCcEEEEEEEec-------ccCchHHHHHHHHHHHHhcCC--CceeeeeeeEecCceEEE
Confidence            5678999999999999864 45 899996531       111234566778887776642  4333222 3446778889


Q ss_pred             EEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      |||+++  ...|...+..+....    .++.++...|+.+|...
T Consensus        94 v~e~~~--~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~  135 (296)
T cd06655          94 VMEYLA--GGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQ  135 (296)
T ss_pred             EEEecC--CCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999998  346776665544332    45567778888888554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=95.17  E-value=0.3  Score=37.57  Aligned_cols=103  Identities=17%  Similarity=0.153  Sum_probs=69.4

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~  112 (165)
                      ...++.|....||++.+. ++ .+++|.-.....       -...+...|.+.|+.+.   ...+++++  +.+.....+
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-------~~~~~~~~e~~~l~~l~---~~~i~~~~~~~~~~~~~~l   74 (253)
T cd05122           5 LEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK-------EKKEKIINEIQILKKCK---HPNIVKYYGSYLKKDELWI   74 (253)
T ss_pred             eeeeccCCceEEEEEEECCCCcEEEEEEecccch-------hHHHHHHHHHHHHHhCC---CCCEeEEEEEEecCCeEEE
Confidence            467888888899999986 45 788887753221       12356667777777665   23344444  345577889


Q ss_pred             EEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhc
Q 045250          113 GMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~  151 (165)
                      +||+++  ...|.+.+...  ...    -.++.++...|+.+|..
T Consensus        75 ~~e~~~--~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~  117 (253)
T cd05122          75 VMEFCS--GGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSN  117 (253)
T ss_pred             EEecCC--CCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcC
Confidence            999998  45777776654  222    24677888888888873

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>KOG3021 consensus Predicted kinase [General function prediction only]

Probab=95.15  E-value=0.08  Score=44.01  Aligned_cols=88  Identities=18%  Similarity=0.100  Sum_probs=57.5

Q ss_pred             cCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHH--HHHHhhccCCCCCceEEEEc---CCCceEEEe
Q 045250           41 GDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEAL--ALKEHGKLCPDHVPEVYHFD---RTMSLIGMR  115 (165)
Q Consensus        41 ~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~--~L~~~~~~~p~~vP~v~~~D---~e~~~~vME  115 (165)
                      |||-+|.-=.-+++.|+|.||.-+.            ..|..+|-+  -|+++.+.--..||+.+..=   --.+.+|||
T Consensus        21 gggcI~~~r~ydtDaG~~FvK~nr~------------~~~~mfeGE~~sLeAi~sT~tv~vprpikvid~p~Ggs~lime   88 (313)
T KOG3021|consen   21 GGGCISDGRHYDTDAGKVFVKVNRS------------IARDMFEGELASLEAIQSTETVLVPRPIKVIDLPGGGSSLIME   88 (313)
T ss_pred             CCceeccccccccCCccEEEEeccc------------cchHHHhhHHHHHHHHHhcCceecCCceeeEecCCCceeeeee
Confidence            4555554322333456999997653            134455544  57777775445666655432   357899999


Q ss_pred             cCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250          116 YLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       116 dl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      ++.  +..||.          -++.+|+.||.+|...
T Consensus        89 ~id--f~~lr~----------~~a~lG~qlAdmHl~n  113 (313)
T KOG3021|consen   89 HID--FQGLRS----------DAAKLGSQLADMHLKN  113 (313)
T ss_pred             hhh--cccchh----------HHHHHHHHHHHHhhhh
Confidence            996  766765          4788999999999665

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=95.15  E-value=0.4  Score=38.64  Aligned_cols=107  Identities=11%  Similarity=-0.050  Sum_probs=62.5

Q ss_pred             ccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEEe
Q 045250           40 VGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLIGMR  115 (165)
Q Consensus        40 l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~vME  115 (165)
                      +|.|...-||++.+. +| .+.+|.-.....    ...-...+...|...++......-..++..+.  .+.+...+|||
T Consensus         2 ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e   77 (278)
T cd05606           2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRI----KMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILD   77 (278)
T ss_pred             cccCCCeEEEEEEEecCCCEEEEEEeecccc----ccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEe
Confidence            677888899999875 35 788897654211    01111223445555665554422123333332  25567789999


Q ss_pred             cCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          116 YLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       116 dl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |++  +..|.+.+......     -.++.++...|.-+|...
T Consensus        78 ~~~--g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~  117 (278)
T cd05606          78 LMN--GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRF  117 (278)
T ss_pred             cCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            998  34676666554332     246667777888888543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=95.13  E-value=0.34  Score=39.23  Aligned_cols=109  Identities=12%  Similarity=0.017  Sum_probs=67.5

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH-FDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~e~~~~  112 (165)
                      .++.||.|....||++... +| .+.||.-.......    .-...+...|..+|+.+..  |..++-... .+.+...+
T Consensus         4 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~----~~~~~~~~~E~~il~~l~~--~~iv~~~~~~~~~~~~~l   77 (285)
T cd05631           4 HYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK----RKGEAMALNEKRILEKVNS--RFVVSLAYAYETKDALCL   77 (285)
T ss_pred             EEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhh----hhhHHHHHHHHHHHHhcCC--CcEEEEEEEEccCCeEEE
Confidence            3577999999999999875 45 78888754321100    0112345568888877643  333333322 35567789


Q ss_pred             EEecCCCCchHHHHHHHc-C-CCC-----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIA-G-IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~-g-~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |||+++  ...|.+.+.. + ..+     -.++.++...|+-+|...
T Consensus        78 v~e~~~--~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  122 (285)
T cd05631          78 VLTIMN--GGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER  122 (285)
T ss_pred             EEEecC--CCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999998  3456555543 1 112     246778888888898753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=95.12  E-value=0.21  Score=40.36  Aligned_cols=107  Identities=19%  Similarity=0.078  Sum_probs=68.3

Q ss_pred             eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCC--Cc
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH-FDRT--MS  110 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~e--~~  110 (165)
                      .++.+|.|..-.||++.+.. + .+++|.......      .-..++...|.+.|+.+..  |..++-.-. .+.+  ..
T Consensus         5 ~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~~   76 (287)
T cd06621           5 ELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN------PDLQKQILRELEINKSCKS--PYIVKYYGAFLDESSSSI   76 (287)
T ss_pred             EEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc------hHHHHHHHHHHHHHHhCCC--CCeeeeeeEEEccCCCeE
Confidence            56788999999999999863 4 788886543211      1234667788888877642  444443222 2333  46


Q ss_pred             eEEEecCCCCchHHHHHHHc----CCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          111 LIGMRYLEPPHIILRKGLIA----GIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdl~~~~~~lr~~l~~----g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      .+||||++.  ..|.+.+..    +...     -.++.+|...|+.+|...
T Consensus        77 ~lv~e~~~~--~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~  125 (287)
T cd06621          77 GIAMEYCEG--GSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK  125 (287)
T ss_pred             EEEEEecCC--CCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            799999983  355544321    2222     258889999999999654

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=95.12  E-value=0.11  Score=41.23  Aligned_cols=111  Identities=14%  Similarity=0.089  Sum_probs=65.8

Q ss_pred             eEeccCCceeEEEEEEeCC--C-eEEEEecCcccccc---CCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCC
Q 045250           37 IKEVGDGNLNFVYIVVGTS--G-SFVIKQALPYVRCI---GESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTM  109 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~--g-svIvKqa~p~~r~~---~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~  109 (165)
                      ...+|.|....||++.+..  + .++||+-.......   ...+.....+...|...++..-.. |..++-+ ++.+...
T Consensus         5 ~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h-~~i~~~~~~~~~~~~   83 (269)
T cd08528           5 LEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRH-PNIVRYYKTFLENDR   83 (269)
T ss_pred             hhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCC-CCeeeEEeeEccCCe
Confidence            4568899999999999865  3 78889876443211   123344455566666666543222 3322222 2446677


Q ss_pred             ceEEEecCCCCchHHHHHHH----cCCCC-----HHHHHHHHHHHHHHHh
Q 045250          110 SLIGMRYLEPPHIILRKGLI----AGIKY-----PLLAEHMSEFMAKTLF  150 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~----~g~~~-----~~~a~~iG~~La~~h~  150 (165)
                      ..++|||++  +..+.+.+.    .+..+     -.++.++...|+-+|.
T Consensus        84 ~~lv~e~~~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~  131 (269)
T cd08528          84 LYIVMDLIE--GAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK  131 (269)
T ss_pred             EEEEEecCC--CCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc
Confidence            889999997  234444432    22222     2466678888888884

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=95.11  E-value=0.15  Score=40.76  Aligned_cols=105  Identities=19%  Similarity=0.184  Sum_probs=70.9

Q ss_pred             eEeccCCceeEEEEEEeC-----CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--CC
Q 045250           37 IKEVGDGNLNFVYIVVGT-----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD--RT  108 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--~e  108 (165)
                      ...||.|..--|||+...     .+ .|+||...+....      -..+....|.+.|+.+ +. | ++.+++.+-  .+
T Consensus         4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~------~~~~~~~~e~~~l~~l-~h-~-ni~~~~g~~~~~~   74 (259)
T PF07714_consen    4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSE------EEEEEFLNEIQILRKL-RH-P-NIVKLYGFCIENE   74 (259)
T ss_dssp             EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSH------HHHHHHHHHHHHHHTH-SB-T-TBE-EEEEEESSS
T ss_pred             eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccccc------ccceeeeecccccccc-cc-c-ccccccccccccc
Confidence            467899999999999887     12 7999998653321      1146777788777776 32 3 344454443  45


Q ss_pred             CceEEEecCCCCchHHHHHHHcC--C-CC----HHHHHHHHHHHHHHHhcc
Q 045250          109 MSLIGMRYLEPPHIILRKGLIAG--I-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdl~~~~~~lr~~l~~g--~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ...+|||+++  ...|++.|...  . ..    -.++.+|+..|+-+|...
T Consensus        75 ~~~lv~e~~~--~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~  123 (259)
T PF07714_consen   75 PLFLVMEYCP--GGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN  123 (259)
T ss_dssp             SEEEEEE--T--TEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccccccccc--ccccccccccccccccccccccccccccccccccccccc
Confidence            6799999998  44888888876  2 22    257888999999998754

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=95.09  E-value=0.26  Score=47.90  Aligned_cols=108  Identities=20%  Similarity=0.241  Sum_probs=71.8

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -++.+|.|....||++.+. +| .+.||.-.....    +......|...|.++++.+..  |..++ ++.  .+.+...
T Consensus         6 Ii~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~----~~e~~~~rflrEi~ILs~L~H--PNIVk-l~~v~~d~~~ly   78 (932)
T PRK13184          6 IIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLS----ENPLLKKRFLREAKIAADLIH--PGIVP-VYSICSDGDPVY   78 (932)
T ss_pred             EEEEEecCCCEEEEEEEECCCCcEEEEEEECcccc----cCHHHHHHHHHHHHHHHhCCC--cCcCe-EEEEEeeCCEEE
Confidence            3578999999999999876 35 799998653221    122334577788888877642  44443 443  3556678


Q ss_pred             EEEecCCCCchHHHHHHHcC----C--------C----CHHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAG----I--------K----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g----~--------~----~~~~a~~iG~~La~~h~~t  152 (165)
                      ++|||++  +.+|++.+...    .        .    .-.++.+|...|+.+|...
T Consensus        79 LVMEY~e--GGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G  133 (932)
T PRK13184         79 YTMPYIE--GYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG  133 (932)
T ss_pred             EEEEcCC--CCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  34677666431    0        0    1246789999999999754

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=95.05  E-value=0.45  Score=37.53  Aligned_cols=105  Identities=17%  Similarity=0.034  Sum_probs=67.3

Q ss_pred             ccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEEEec
Q 045250           40 VGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIGMRY  116 (165)
Q Consensus        40 l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~vMEd  116 (165)
                      +|.|....||++.+.. + .+++|.-....-. ..   -...+...|...|+.+..  |..++-+ .+.|.....++|||
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~---~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~e~   74 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIV-ET---GQQEHIFSEKEILEECNH--PFIVKLYRTFKDKKYIYMLMEY   74 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcch-hh---hHHHHHHHHHHHHHhCCC--CCEeeeeeeEEcCCccEEEEec
Confidence            4667778899999873 4 8999976532211 01   123567778887776642  4433322 34577888999999


Q ss_pred             CCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 045250          117 LEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       117 l~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t  152 (165)
                      .+  ...|.+.+......+     .++.+|...|+-+|...
T Consensus        75 ~~--~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~  113 (262)
T cd05572          75 CL--GGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRG  113 (262)
T ss_pred             CC--CCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            97  458888776654332     35567778888888643

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=95.04  E-value=0.34  Score=38.00  Aligned_cols=107  Identities=19%  Similarity=0.109  Sum_probs=65.2

Q ss_pred             eEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-CC-CceE
Q 045250           37 IKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD-RT-MSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-~e-~~~~  112 (165)
                      ++.+|.|...-||++.+.. + .+++|.-......     .-..++...|.+.++.+..  |..++-...+. .+ ...+
T Consensus         5 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-----~~~~~~~~~e~~~l~~l~~--~~i~~~~~~~~~~~~~~~l   77 (257)
T cd08223           5 VRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNAS-----RRERKAAEQEAQLLSQLKH--PNIVAYRESWEGEDGLLYI   77 (257)
T ss_pred             EEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcC-----HHHHHHHHHHHHHHHhCCC--CCeeeeeeeecCCCCEEEE
Confidence            4678888888999998864 3 7888885321110     0112345567677766643  44444333333 23 2469


Q ss_pred             EEecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +||+++  ..+|.+.+.+.  ...     -.++.++...|+.+|...
T Consensus        78 v~e~~~--~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~  122 (257)
T cd08223          78 VMGFCE--GGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH  122 (257)
T ss_pred             EecccC--CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999998  34666666542  212     256778888888898754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=95.01  E-value=0.18  Score=40.23  Aligned_cols=106  Identities=17%  Similarity=0.146  Sum_probs=67.1

Q ss_pred             eEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCC-ceEEEEcCCCceEE
Q 045250           37 IKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHV-PEVYHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~v-P~v~~~D~e~~~~v  113 (165)
                      .+.||.|....||++...+ + .++||+-.....      .....+...|...++.+... |..+ ..-++.+.+...+|
T Consensus         4 ~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~e~~~l~~~~~h-~~i~~~~~~~~~~~~~~lv   76 (283)
T cd07830           4 IKQLGDGTFGSVYLARNKETGELVAIKKMKKKFY------SWEECMNLREVKSLRKLNEH-PNIVKLKEVFRENDELYFV   76 (283)
T ss_pred             heeeccCCceEEEEEEECCCCcEEEEEEehhhcc------chhHHHHHHHHHHHHhccCC-CCchhHHHHhhcCCcEEEE
Confidence            3568888889999999863 4 788997543221      12223344577777766533 2211 22234567888999


Q ss_pred             EecCCCCchHHHHHHHcCC--C-C----HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIAGI--K-Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g~--~-~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  . ++++.+....  . .    ..++.++...|..+|...
T Consensus        77 ~e~~~--~-~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~  119 (283)
T cd07830          77 FEYME--G-NLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG  119 (283)
T ss_pred             EecCC--C-CHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99995  2 5666665543  2 1    357778888888888765

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=95.01  E-value=0.62  Score=36.51  Aligned_cols=106  Identities=20%  Similarity=0.053  Sum_probs=68.2

Q ss_pred             eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~  112 (165)
                      .++.++.|....||++.... + .+++|.-....    .   -.......|.++|+.+..  |..++-. ++.+.....+
T Consensus         7 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~----~---~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~l   77 (262)
T cd06613           7 LIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP----G---DDFEIIQQEISMLKECRH--PNIVAYFGSYLRRDKLWI   77 (262)
T ss_pred             EEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc----h---hhHHHHHHHHHHHHhCCC--CChhceEEEEEeCCEEEE
Confidence            45778999999999998753 3 67777654211    1   134566677777776643  4433322 2346677789


Q ss_pred             EEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +||+++  ...+.+.+...  ...    -.++.++...|+-+|...
T Consensus        78 ~~e~~~--~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~  121 (262)
T cd06613          78 VMEYCG--GGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETG  121 (262)
T ss_pred             EEeCCC--CCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999998  35666666543  222    246777888888888654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=95.01  E-value=0.27  Score=40.75  Aligned_cols=106  Identities=9%  Similarity=0.015  Sum_probs=61.7

Q ss_pred             eccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceEEE
Q 045250           39 EVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLIGM  114 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~vM  114 (165)
                      .||.|....||++.+.. + .+++|.-.......    .-...+...|...+.  ..+...++++++  +.+.+...+||
T Consensus         2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~~l--~~~~h~~Iv~~~~~~~~~~~~~lv~   75 (325)
T cd05602           2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILK----KKEEKHIMSERNVLL--KNVKHPFLVGLHFSFQTADKLYFVL   75 (325)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHh----hhHHHHHHHHHHHHH--HhCCCCCCCceeEEEEcCCeEEEEE
Confidence            57888899999998763 4 68888754321100    011122333333221  122222334443  34567778999


Q ss_pred             ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 Edl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |+++  +..|.+.+.....+     ..++.+|...|.-+|...
T Consensus        76 e~~~--~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~g  116 (325)
T cd05602          76 DYIN--GGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN  116 (325)
T ss_pred             eCCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9998  34676766654432     236778888999999754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=95.00  E-value=0.46  Score=39.49  Aligned_cols=105  Identities=13%  Similarity=0.116  Sum_probs=67.2

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-------c
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-------D  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-------D  106 (165)
                      -.+.+|.|....||++.+. +| .++||+-.+.-.      .....|...|..+|+.+..  |..++ ++.+       +
T Consensus         9 i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~niv~-~~~~~~~~~~~~   79 (336)
T cd07849           9 NLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEH------QTFCQRTLREIKILRRFKH--ENIIG-ILDIIRPPSFES   79 (336)
T ss_pred             EEEEEEecCCeEEEEEEEcCCCCeEEEEEeccccc------chhHHHHHHHHHHHHhCCC--CCcCc-hhheeecccccc
Confidence            3567899999999999865 45 899998754321      1223567778888887762  43322 2211       1


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      .....++||+++.   .+.+.+..+....    .++.+|...|+.+|...
T Consensus        80 ~~~~~lv~e~~~~---~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~  126 (336)
T cd07849          80 FNDVYIVQELMET---DLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSAN  126 (336)
T ss_pred             cceEEEEehhccc---CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            1234789999983   4555555444332    46677888888898765

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=95.00  E-value=0.26  Score=39.01  Aligned_cols=107  Identities=12%  Similarity=0.024  Sum_probs=70.1

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCcc-ccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPY-VRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~-~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      .+.+|.|....||++.+. +| .+++|.-..- +..     .-.......|.++++.+..  ...+++++  +.+.+...
T Consensus         6 ~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~-----~~~~~~~~~e~~~~~~l~~--~~~i~~~~~~~~~~~~~~   78 (280)
T cd05581           6 GKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIK-----EKKVKYVKIEKEVLTRLNG--HPGIIKLYYTFQDEENLY   78 (280)
T ss_pred             eeeecCCCceEEEEEEEcCCCCEEEEEEechHhccc-----hHHHHHHHHHHHHHHhccc--CCCchhHHHHhcCCceEE
Confidence            457899999999999886 45 7888875431 110     0112456677777776652  22344444  34667888


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ++||+++  ..+|++.+.+...+     ..++.++...|+.+|...
T Consensus        79 lv~e~~~--~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~  122 (280)
T cd05581          79 FVLEYAP--NGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKG  122 (280)
T ss_pred             EEEcCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997  35788877765332     256777888888888654

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=94.99  E-value=0.58  Score=36.72  Aligned_cols=108  Identities=16%  Similarity=0.099  Sum_probs=67.6

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~  112 (165)
                      .++.+|.|....||.+.+. ++ .+++|-.......  +   -...+...|.++|+.+..  |..+|-. ++.+.....+
T Consensus         4 ~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~--~---~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~~   76 (256)
T cd08221           4 PIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLS--E---KERRDALNEIVILSLLQH--PNIIAYYNHFMDDNTLLI   76 (256)
T ss_pred             EeeEecccCCceEEEEEEcCCCcEEEEEEEeecccc--h---hHHHHHHHHHHHHHhCCC--CCeeEEEeEEecCCeEEE
Confidence            3577888888877777665 34 7888875321110  1   123456678888887742  4433333 3556677788


Q ss_pred             EEecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +||+++  +..|.+.+.+.  ..+     -.++.++...|+-+|...
T Consensus        77 ~~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~  121 (256)
T cd08221          77 EMEYAN--GGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG  121 (256)
T ss_pred             EEEecC--CCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            899998  45677766553  111     245677888888888643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=94.99  E-value=0.45  Score=37.94  Aligned_cols=106  Identities=15%  Similarity=0.068  Sum_probs=67.4

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~  112 (165)
                      ++.+|.|....||++.+. ++ .++||.-......  .   --.++...|.++|+.+..  |. +++++  +.+.+...+
T Consensus         6 ~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~--~---~~~~~~~~e~~~l~~l~~--~~-i~~~~~~~~~~~~~~i   77 (288)
T cd07833           6 LGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDD--E---DVKKTALREVKVLRQLRH--EN-IVNLKEAFRRKGRLYL   77 (288)
T ss_pred             EEEecccCCeeEEEEEeCCCCcEEEEehhhhhccc--c---cchhHHHHHHHHHHhcCC--CC-eeehhheEEECCEEEE
Confidence            566888888889999876 34 7888865432211  1   122577788888887762  32 22222  235567899


Q ss_pred             EEecCCCCchHHHHHHHcCC-CC----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGI-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||++ . ..+.....+.. ..    -.++.+|...|+.+|...
T Consensus        78 v~e~~~-~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~  120 (288)
T cd07833          78 VFEYVE-R-TLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHN  120 (288)
T ss_pred             EEecCC-C-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999998 3 45544333322 22    256778899999888754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=94.99  E-value=0.28  Score=41.30  Aligned_cols=107  Identities=16%  Similarity=0.109  Sum_probs=65.9

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-------
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD-------  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-------  106 (165)
                      .++.+|.|....||++.+. .+ .++||.-.....     ..-...+...|...|+.+..  |..++-.-.+.       
T Consensus        28 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--~~ii~~~~~~~~~~~~~~  100 (364)
T cd07875          28 NLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ-----NQTHAKRAYRELVLMKCVNH--KNIIGLLNVFTPQKSLEE  100 (364)
T ss_pred             EEEEeecCCCeEEEEEEECCCCcEEEEEEeCcccc-----CchhHHHHHHHHHHHHhcCC--CCccccceeecccccccc
Confidence            4678999999999999876 34 788997542211     11223566778888876642  33322221121       


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCC---CHHHHHHHHHHHHHHHhcc
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLIAGIK---YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~~g~~---~~~~a~~iG~~La~~h~~t  152 (165)
                      .....+|||+++.   .+.+.+...-.   ...++.++...|+-+|...
T Consensus       101 ~~~~~lv~e~~~~---~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  146 (364)
T cd07875         101 FQDVYIVMELMDA---NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG  146 (364)
T ss_pred             cCeEEEEEeCCCC---CHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            1235799999983   34444433211   1247888999999999753

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=94.99  E-value=0.8  Score=37.10  Aligned_cols=107  Identities=16%  Similarity=0.044  Sum_probs=66.8

Q ss_pred             eEeccCCceeEEEEEEeCC---C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EEcC--CC
Q 045250           37 IKEVGDGNLNFVYIVVGTS---G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY-HFDR--TM  109 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~---g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~D~--e~  109 (165)
                      +..+|.|....||++.+..   + .++||.-.....    .+.--.++...|..+|+.+..  |..++-.- +.+.  ..
T Consensus         5 ~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~----~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~   78 (316)
T cd07842           5 EGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKE----QYTGISQSACREIALLRELKH--ENVVSLVEVFLEHADKS   78 (316)
T ss_pred             EEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccc----cccCccHHHHHHHHHHHhcCC--CCccceEEEEeCCCCce
Confidence            4568999999999999854   4 799998765331    122223566778888887653  43333222 2333  45


Q ss_pred             ceEEEecCCCCchHHHHHHHcC------CCC----HHHHHHHHHHHHHHHhcc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAG------IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g------~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ..+|||+++.   .+.+.+...      ...    -.++.+|...|.-+|...
T Consensus        79 ~~lv~e~~~~---~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  128 (316)
T cd07842          79 VYLLFDYAEH---DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW  128 (316)
T ss_pred             EEEEEeCCCc---CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence            7899999973   344433221      111    247778889998888654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=94.98  E-value=0.54  Score=37.56  Aligned_cols=106  Identities=16%  Similarity=0.097  Sum_probs=69.0

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCce-EEEEcCCCceEE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPE-VYHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~-v~~~D~e~~~~v  113 (165)
                      ++.+|.|...-||++.+. +| .+++|.-.....     ..-..++...|.+.|+.+..  |..++- -++.+.....++
T Consensus         4 ~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-----~~~~~~~~~~E~~~l~~l~~--~~iv~~~~~~~~~~~~~iv   76 (283)
T cd07835           4 VEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE-----DEGVPSTAIREISLLKELNH--PNIVRLLDVVHSENKLYLV   76 (283)
T ss_pred             heEecCCCCeEEEEEEEcCCCCEEEEEEeecccc-----cccchhHHHHHHHHHHhcCC--CCccCHhheeccCCeEEEE
Confidence            467899999999999875 45 788886432111     01122456678888887752  332221 145577888899


Q ss_pred             EecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  . .+++.+....   ..    -.++.++...|+.+|...
T Consensus        77 ~e~~~--~-~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~  119 (283)
T cd07835          77 FEFLD--L-DLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR  119 (283)
T ss_pred             EeccC--c-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99996  2 5666665533   22    257778889999999764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=94.97  E-value=0.92  Score=36.03  Aligned_cols=108  Identities=13%  Similarity=0.037  Sum_probs=69.0

Q ss_pred             eEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCC---
Q 045250           37 IKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTM---  109 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~---  109 (165)
                      +..+|.|...-||++.... + .+++|........  ..   -......|...++.+.++--..+.+++.+  +.+.   
T Consensus         4 ~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~--~~---~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~   78 (287)
T cd07838           4 LAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSE--EG---IPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRE   78 (287)
T ss_pred             EEEecccCceEEEEEEECCCCCEEEEEEecccccc--ch---hhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCC
Confidence            5678888888899999864 5 7888876543321  11   12345568888888876543344444433  4454   


Q ss_pred             --ceEEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 045250          110 --SLIGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 --~~~vMEdl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t  152 (165)
                        ..++||+++ .  .+.+.+....   ..    -.++.+|...|+-+|...
T Consensus        79 ~~~~l~~e~~~-~--~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~  127 (287)
T cd07838          79 LKLTLVFEHVD-Q--DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR  127 (287)
T ss_pred             ceeEEEehhcc-c--CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              789999997 3  4555554421   12    247778888888888764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=94.95  E-value=0.65  Score=36.52  Aligned_cols=105  Identities=12%  Similarity=-0.010  Sum_probs=66.7

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-------
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD-------  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-------  106 (165)
                      -++.++.|....||++.+. ++ .+++|.-....        ...++...|.++++.+...  ..+++++.+-       
T Consensus        10 ~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~--------~~~~~~~~e~~~l~~~~~h--~~i~~~~~~~~~~~~~~   79 (275)
T cd06608          10 LVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE--------DEEEEIKEEYNILRKYSNH--PNIATFYGAFIKKNPPG   79 (275)
T ss_pred             heeeecCCCCeEEEEEEECCCCcEEEEEEEecCc--------hhHHHHHHHHHHHHHhcCC--CChheEEEEEEecCCCC
Confidence            3567888888889999986 34 78888744221        1335677788888876442  3455555543       


Q ss_pred             -CCCceEEEecCCCCchHHHHHHHc-----CCCCH----HHHHHHHHHHHHHHhcc
Q 045250          107 -RTMSLIGMRYLEPPHIILRKGLIA-----GIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 -~e~~~~vMEdl~~~~~~lr~~l~~-----g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                       .+...++||+++  ...|.+.+..     +....    .++.++...|.-+|...
T Consensus        80 ~~~~~~lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~  133 (275)
T cd06608          80 NDDQLWLVMELCG--GGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK  133 (275)
T ss_pred             cceEEEEEEEcCC--CCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence             223579999998  3455555433     22222    36777888888888654

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=94.95  E-value=0.4  Score=39.24  Aligned_cols=106  Identities=18%  Similarity=0.108  Sum_probs=68.3

Q ss_pred             eEeccCCceeEEEEEEeC-CC---eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCc
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMS  110 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~  110 (165)
                      .+.+|.|....||++.+. +|   .+.+|.......      .-...+...|.+.|+.+... | .+++++.  .+....
T Consensus        12 ~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~Ei~~l~~l~~h-~-~iv~~~~~~~~~~~~   83 (303)
T cd05088          12 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS------KDDHRDFAGELEVLCKLGHH-P-NIINLLGACEHRGYL   83 (303)
T ss_pred             eeeecCCCCceEEEEEEccCCceeeEEEEEecccCC------HHHHHHHHHHHHHHHHhcCC-C-CcceEEEEECCCCCc
Confidence            367899999999999864 33   346666443221      12234666788888777543 3 4555543  355678


Q ss_pred             eEEEecCCCCchHHHHHHHcCC----------------CC-----HHHHHHHHHHHHHHHhcc
Q 045250          111 LIGMRYLEPPHIILRKGLIAGI----------------KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdl~~~~~~lr~~l~~g~----------------~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      .+||||++  ..+|.+.+....                .+     -.++.+|...|+-+|...
T Consensus        84 ~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g  144 (303)
T cd05088          84 YLAIEYAP--HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ  144 (303)
T ss_pred             eEEEEeCC--CCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            89999997  346777665422                11     246778888899999754

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=94.92  E-value=0.44  Score=38.37  Aligned_cols=68  Identities=13%  Similarity=0.030  Sum_probs=41.5

Q ss_pred             HHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEEEecCCCCchHHHHHHHc--CCCC----HHHHHHHHHHHHHHHhc
Q 045250           80 RAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLIGMRYLEPPHIILRKGLIA--GIKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus        80 R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~vMEdl~~~~~~lr~~l~~--g~~~----~~~a~~iG~~La~~h~~  151 (165)
                      +...|+.+++.+.   ...+++++.+  +.....+||||++  ...|...+..  +...    -.++.+|...|+-+|..
T Consensus        62 ~~~~~~~~~~~l~---h~niv~~~~~~~~~~~~~lv~ey~~--~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  136 (274)
T cd05076          62 AFFETASLMSQVS---HIHLAFVHGVCVRGSENIMVEEFVE--HGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDK  136 (274)
T ss_pred             HHHHHHHHHhcCC---CCCeeeEEEEEEeCCceEEEEecCC--CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC
Confidence            3344444554332   3445555554  5566789999998  3467666654  2222    25778888888888865


Q ss_pred             c
Q 045250          152 T  152 (165)
Q Consensus       152 t  152 (165)
                      .
T Consensus       137 ~  137 (274)
T cd05076         137 N  137 (274)
T ss_pred             C
Confidence            4

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=94.92  E-value=0.43  Score=37.90  Aligned_cols=105  Identities=12%  Similarity=-0.055  Sum_probs=67.9

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      ....+|.|-...||++.+. ++ .+++|.......       -...+...|.+.|+.+..  |..+ +++.  .+.+...
T Consensus        12 ~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~-------~~~~~~~~e~~~l~~l~h--~~iv-~~~~~~~~~~~~~   81 (268)
T cd06624          12 ERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDS-------RYVQPLHEEIALHSYLKH--RNIV-QYLGSDSENGFFK   81 (268)
T ss_pred             ceEEEecCCceEEEEeEecCCCcEEEEEEecCCCH-------HHHHHHHHHHHHHHhcCC--CCee-eeeeeeccCCEEE
Confidence            3456888888889999876 44 789996542211       122456677777776642  3333 3333  4556778


Q ss_pred             EEEecCCCCchHHHHHHHcC--CC--C----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAG--IK--Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g--~~--~----~~~a~~iG~~La~~h~~t  152 (165)
                      ++||+++  ...|++.+...  ..  .    ..++.+|...|+-+|...
T Consensus        82 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  128 (268)
T cd06624          82 IFMEQVP--GGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQ  128 (268)
T ss_pred             EEEecCC--CCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  45787777653  11  2    145678999999999653

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=94.87  E-value=0.47  Score=38.24  Aligned_cols=105  Identities=15%  Similarity=0.119  Sum_probs=68.5

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC--CCc
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDR--TMS  110 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~--e~~  110 (165)
                      +..+|.|....||++.+. ++ .+++|+-.....  ...+   ..+...|...|+.+..  |. ++.++.  .+.  ...
T Consensus        10 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~---~~~~~~e~~~l~~l~h--~n-i~~~~~~~~~~~~~~~   81 (293)
T cd07843          10 LNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKE--KEGF---PITSLREINILLKLQH--PN-IVTVKEVVVGSNLDKI   81 (293)
T ss_pred             hhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccc--cccc---hhhHHHHHHHHHhcCC--CC-EEEEEEEEEecCCCcE
Confidence            456788888899999986 35 788887542221  1111   2345568888877752  33 444433  445  788


Q ss_pred             eEEEecCCCCchHHHHHHHcCCC--C----HHHHHHHHHHHHHHHhcc
Q 045250          111 LIGMRYLEPPHIILRKGLIAGIK--Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdl~~~~~~lr~~l~~g~~--~----~~~a~~iG~~La~~h~~t  152 (165)
                      .+|||+++ .  .|++.+.....  .    -.++.+|...|+-+|...
T Consensus        82 ~lv~e~~~-~--~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  126 (293)
T cd07843          82 YMVMEYVE-H--DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNW  126 (293)
T ss_pred             EEEehhcC-c--CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999998 2  67776655321  1    257888899999999765

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=94.86  E-value=0.38  Score=40.04  Aligned_cols=106  Identities=12%  Similarity=0.096  Sum_probs=67.5

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC----
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DR----  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~----  107 (165)
                      ....+|.|....||++.+. +| .++||+-.....     -.....+...|..+|+.+..  |. +.+++.+  +.    
T Consensus         9 ~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--~n-i~~~~~~~~~~~~~~   80 (337)
T cd07858           9 PIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD-----NRIDAKRTLREIKLLRHLDH--EN-VIAIKDIMPPPHREA   80 (337)
T ss_pred             EEEEeccCCCeEEEEEEecCCCCeEEEEEeccccc-----ccchhHHHHHHHHHHHhcCC--CC-ccchHHheecccccc
Confidence            4568999999999999876 44 899998653221     11234567778888887643  22 2222211  11    


Q ss_pred             -CCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          108 -TMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 -e~~~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                       ....++||+++.   .+.+.+.++...     -.++.+|...|.-+|...
T Consensus        81 ~~~~~lv~e~~~~---~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  128 (337)
T cd07858          81 FNDVYIVYELMDT---DLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSAN  128 (337)
T ss_pred             cCcEEEEEeCCCC---CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             235899999972   466666554332     246778888888888764

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=94.86  E-value=0.39  Score=37.79  Aligned_cols=108  Identities=18%  Similarity=0.084  Sum_probs=66.9

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~  112 (165)
                      .+.+|.|....||++.+. ++ .+++|.-.....  ..+...-..+...|.++|+.+..  | .+.+++.  .+.+...+
T Consensus         7 ~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~--~~~~~~~~~~~~~e~~~l~~l~~--~-~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           7 GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPD--SPETKKEVNALECEIQLLKNLQH--E-RIVQYYGCLRDDETLSI   81 (263)
T ss_pred             cceecCCCceEEEEEEEcCCCcEEEEEEEeeccc--chhhHHHHHHHHHHHHHHHhCCC--C-CeeeeEEEEccCCeEEE
Confidence            457888988899999875 34 788886332111  01111122345567777766532  3 3344443  36678889


Q ss_pred             EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      +||+++  ...|++.+......     -.++.++...|+.+|..
T Consensus        82 v~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~  123 (263)
T cd06625          82 FMEYMP--GGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSN  123 (263)
T ss_pred             EEEECC--CCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999997  34677777654332     24677888888888854

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=94.85  E-value=0.5  Score=39.37  Aligned_cols=108  Identities=14%  Similarity=0.037  Sum_probs=66.9

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -++.||.|....||++... ++ .+.||.-...-...    .....+...|..+++....  | +++.++.  .+.....
T Consensus         5 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~l~~~~~--~-~i~~~~~~~~~~~~~~   77 (331)
T cd05597           5 ILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLK----RAETACFREERDVLVNGDR--R-WITNLHYAFQDENNLY   77 (331)
T ss_pred             EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhh----hhhHHHHHHHHHHHHhCCC--C-CCCceEEEEecCCeEE
Confidence            3577999999999999876 34 78888754211110    1122345566666655422  3 3444432  3556678


Q ss_pred             EEEecCCCCchHHHHHHHc-CCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIA-GIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~-g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  ...|.+.+.+ +...     ..++.+|...|+-+|...
T Consensus        78 lv~e~~~--g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  122 (331)
T cd05597          78 LVMDYYV--GGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLG  122 (331)
T ss_pred             EEEecCC--CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999997  3577777754 2222     245667788888888654

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=94.83  E-value=0.43  Score=38.40  Aligned_cols=106  Identities=13%  Similarity=0.050  Sum_probs=68.0

Q ss_pred             eeEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--Ec
Q 045250           36 TIKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FD  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D  106 (165)
                      .+..+|.|..+.||++...      .+ .+.+|+......      .-...+...|...|+.+..  | .+.+++.  .+
T Consensus         9 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~ei~~l~~l~h--~-~iv~~~~~~~~   79 (288)
T cd05050           9 YVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS------ADMQADFQREAALMAEFDH--P-NIVKLLGVCAV   79 (288)
T ss_pred             ecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC------HHHHHHHHHHHHHHHhcCC--C-chheEEEEEcC
Confidence            3567888999999999863      23 688887643221      1112445567777776532  3 3334443  34


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCC---------------------------CHHHHHHHHHHHHHHHhcc
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLIAGIK---------------------------YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~~g~~---------------------------~~~~a~~iG~~La~~h~~t  152 (165)
                      .+...++||+++  ..+|++.+..+..                           .-.++.+|...|+.+|...
T Consensus        80 ~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~  150 (288)
T cd05050          80 GKPMCLLFEYMA--YGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK  150 (288)
T ss_pred             CCccEEEEecCC--CCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence            567789999998  3478887765321                           0257888999999999753

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=94.80  E-value=0.35  Score=38.90  Aligned_cols=104  Identities=16%  Similarity=0.211  Sum_probs=71.0

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      ....++.|..--||++... ++ .+++|.......        ..++...|.+.|+.+..  | .+++++  +.+.....
T Consensus        23 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--------~~~~~~~e~~~l~~l~~--~-~i~~~~~~~~~~~~~~   91 (286)
T cd06614          23 NLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ--------NKELIINEILIMKDCKH--P-NIVDYYDSYLVGDELW   91 (286)
T ss_pred             HhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch--------hHHHHHHHHHHHHHCCC--C-CeeEEEEEEEECCEEE
Confidence            3466888888889999887 34 899997642211        34566778777776653  3 333333  34667888


Q ss_pred             EEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ++||+++  ..+|.+.+....  ..    -.++.++...|+.+|...
T Consensus        92 lv~e~~~--~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~g  136 (286)
T cd06614          92 VVMEYMD--GGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQN  136 (286)
T ss_pred             EEEeccC--CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999998  458888777653  22    247888899999999643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=94.79  E-value=0.36  Score=39.15  Aligned_cols=105  Identities=11%  Similarity=0.064  Sum_probs=67.2

Q ss_pred             eEeccCCceeEEEEEEeCC-----------------C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCC
Q 045250           37 IKEVGDGNLNFVYIVVGTS-----------------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDH   98 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~-----------------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~   98 (165)
                      .+.+|.|....||++...+                 + .+.+|.......      .-...+...|.++|+.+..  | .
T Consensus        10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~------~~~~~~~~~E~~~l~~l~~--~-~   80 (296)
T cd05095          10 KEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDAN------KNARNDFLKEIKIMSRLKD--P-N   80 (296)
T ss_pred             eeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCC------HHHHHHHHHHHHHHHhCCC--C-C
Confidence            4679999999999985431                 2 466666543211      1123455678888877743  3 3


Q ss_pred             CceEE--EEcCCCceEEEecCCCCchHHHHHHHcCCC----------------CHHHHHHHHHHHHHHHhcc
Q 045250           99 VPEVY--HFDRTMSLIGMRYLEPPHIILRKGLIAGIK----------------YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus        99 vP~v~--~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~----------------~~~~a~~iG~~La~~h~~t  152 (165)
                      +++++  +.+.+...++||+++  ..+|.+.+.+...                .-.++.+|...|+-+|...
T Consensus        81 i~~~~~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~  150 (296)
T cd05095          81 IIRLLAVCITSDPLCMITEYME--NGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN  150 (296)
T ss_pred             cceEEEEEecCCccEEEEEeCC--CCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence            33443  346677889999997  3477776665321                2356788889999999765

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=94.79  E-value=0.28  Score=38.32  Aligned_cols=104  Identities=14%  Similarity=0.041  Sum_probs=65.3

Q ss_pred             ccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEEe
Q 045250           40 VGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLIGMR  115 (165)
Q Consensus        40 l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~vME  115 (165)
                      +|.|....||++.+.+ | .+++|.-......    -.-..++...|.+.|+.+..  |.. ++++.  -+.....++||
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~----~~~~~~~~~~e~~~l~~~~h--~~i-~~~~~~~~~~~~~~lv~e   73 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMI----RKNQVDQVLTERDILSQAQS--PYV-VKLYYSFQGKKNLYLVME   73 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhh----hhhHHHHHHHHHHHHHhCCC--cch-hHHHHheecCcEEEEEEe
Confidence            4678888999999874 5 8999965322110    01234566667777776652  332 22221  24455679999


Q ss_pred             cCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhcc
Q 045250          116 YLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       116 dl~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~t  152 (165)
                      +++  ...|+..+.+... .    -.++.+|...|+.+|...
T Consensus        74 ~~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~  113 (265)
T cd05579          74 YLP--GGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNG  113 (265)
T ss_pred             cCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence            997  3477776655322 2    257888899999998654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=94.76  E-value=0.58  Score=37.86  Aligned_cols=108  Identities=11%  Similarity=-0.049  Sum_probs=66.5

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v  113 (165)
                      ...+|.|...-||++... ++ .+.+|+-.+..... .   -.......|.++|+.+..  |..++-. .+.+.+...++
T Consensus         5 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~-~---~~~~~~~~E~~il~~l~~--~~i~~~~~~~~~~~~~~lv   78 (285)
T cd05632           5 YRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKK-R---KGESMALNEKQILEKVNS--QFVVNLAYAYETKDALCLV   78 (285)
T ss_pred             EEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhh-h---hHHHHHHHHHHHHHHcCC--cCceeEEEEEecCCEEEEE
Confidence            466899999999999875 45 68888754332110 0   112234568888887754  3444433 33455667799


Q ss_pred             EecCCCCchHHHHHHHc-CC--CC----HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIA-GI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~-g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  ...|+..+.. +.  ..    -.++.++...|.-+|...
T Consensus        79 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~  122 (285)
T cd05632          79 LTIMN--GGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN  122 (285)
T ss_pred             EEecc--CccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99998  3466665543 21  11    246677788888888654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=94.75  E-value=0.27  Score=39.30  Aligned_cols=104  Identities=13%  Similarity=0.048  Sum_probs=64.0

Q ss_pred             eccCCceeEEEEEEeCCC----eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250           39 EVGDGNLNFVYIVVGTSG----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~~g----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v  113 (165)
                      +||.|....||++...++    .+++|.-.....      .-..++...|...++.+..  |..++-+ .+.+.....+|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~e~~~~~~l~h--~~iv~~~~~~~~~~~~~lv   73 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANAS------SKEQNEFLQQGDPYRILQH--PNILQCLGQCVEAIPYLLV   73 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCC------hHHHHHHHHHHHHHhccCC--cchhheEEEecCCCccEEE
Confidence            578888888998865322    466666432211      1123566777777765532  4444333 23455667899


Q ss_pred             EecCCCCchHHHHHHHcCCC-----C----HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIAGIK-----Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g~~-----~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||++  ..+|++.+.+...     .    -.++.+|...|.-+|...
T Consensus        74 ~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~  119 (268)
T cd05086          74 FEYCE--LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN  119 (268)
T ss_pred             EecCC--CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence            99998  4578777765321     1    246778889999999654

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=94.70  E-value=0.25  Score=41.37  Aligned_cols=106  Identities=15%  Similarity=0.092  Sum_probs=65.6

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC------
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR------  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~------  107 (165)
                      .++.+|.|....||++.+. .+ .+.||.-.....     -.-...|...|...|+.+..  |..++-.-.+..      
T Consensus        21 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~   93 (355)
T cd07874          21 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-----NQTHAKRAYRELVLMKCVNH--KNIISLLNVFTPQKSLEE   93 (355)
T ss_pred             EEEEeeecCCEEEEEEEecCCCceEEEEEeCCccc-----ChHHHHHHHHHHHHHHHhCC--Cchhceeeeeeccccccc
Confidence            4678999999999999875 34 788886432111     11223566678887776642  433332222221      


Q ss_pred             -CCceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250          108 -TMSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 -e~~~~vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                       ....+|||+++.   .+.+.+.. ...    ..++.+|...|+-+|...
T Consensus        94 ~~~~~lv~e~~~~---~l~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~g  139 (355)
T cd07874          94 FQDVYLVMELMDA---NLCQVIQM-ELDHERMSYLLYQMLCGIKHLHSAG  139 (355)
T ss_pred             cceeEEEhhhhcc---cHHHHHhh-cCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             235799999983   34444432 222    247888999999999754

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=94.69  E-value=0.69  Score=37.86  Aligned_cols=108  Identities=15%  Similarity=-0.027  Sum_probs=69.3

Q ss_pred             eeEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcC
Q 045250           36 TIKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDR  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~  107 (165)
                      -.+.+|.|....||++..-      .+ .+.||.-.....      .-..++...|.++|+.+... |..++-+ ++.+.
T Consensus        39 ~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-~~iv~~~~~~~~~  111 (302)
T cd05055          39 FGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH------SSEREALMSELKIMSHLGNH-ENIVNLLGACTIG  111 (302)
T ss_pred             EcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC------hHHHHHHHHHHHHHHhccCC-CCcceEEEEEecC
Confidence            3567899999999999742      12 466665443221      12235677888899887543 4433332 23455


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCC--C-----HHHHHHHHHHHHHHHhcc
Q 045250          108 TMSLIGMRYLEPPHIILRKGLIAGIK--Y-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 e~~~~vMEdl~~~~~~lr~~l~~g~~--~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ....++||+++  ...|.+.+.....  .     -.++.+|...|+-+|...
T Consensus       112 ~~~~lv~e~~~--~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~  161 (302)
T cd05055         112 GPILVITEYCC--YGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN  161 (302)
T ss_pred             CceEEEEEcCC--CCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            66789999998  3477777754321  1     247788888999999764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=94.68  E-value=0.65  Score=36.42  Aligned_cols=106  Identities=19%  Similarity=0.188  Sum_probs=66.2

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~  112 (165)
                      +..+|.|..+-+|.+.+. +| .+++|.-... +..    .-...+...|.++|+.+..  |. +++++  +.+.....+
T Consensus         5 ~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~-~~~----~~~~~~~~~e~~~l~~l~~--~~-i~~~~~~~~~~~~~~l   76 (256)
T cd08218           5 VKKIGEGSFGKAILVKSKEDGKQYVIKEINIS-KMS----PKEREESRKEVAVLSNMKH--PN-IVQYQESFEENGNLYI   76 (256)
T ss_pred             EEEeccCCceEEEEEEEcCCCCEEEEEEEEhH-hCC----hHHHHHHHHHHHHHHhCCC--CC-eeeeEeeecCCCeEEE
Confidence            677899999999999876 34 7888863211 100    1122456667777776653  33 33444  335566789


Q ss_pred             EEecCCCCchHHHHHHHcCC--CC-----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGI--KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~--~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |||++.  ...|.+.+....  ..     -.++.++...|+-+|...
T Consensus        77 v~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~  121 (256)
T cd08218          77 VMDYCE--GGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK  121 (256)
T ss_pred             EEecCC--CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999998  345666654421  11     245778888899888543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=94.68  E-value=0.27  Score=40.07  Aligned_cols=106  Identities=12%  Similarity=0.094  Sum_probs=68.4

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~  112 (165)
                      ....+|.|....||++.+. ++ .++||.-.    .   ...-..++...|...|+.+..  |..++-. .+.+.+...+
T Consensus        26 ~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~----~---~~~~~~~~~~~e~~~l~~l~h--~~ii~~~~~~~~~~~~~l   96 (292)
T cd06658          26 SFIKIGEGSTGIVCIATEKHTGKQVAVKKMD----L---RKQQRRELLFNEVVIMRDYHH--ENVVDMYNSYLVGDELWV   96 (292)
T ss_pred             hhhcccCCCCeEEEEEEECCCCCEEEEEEEe----c---chHHHHHHHHHHHHHHHhCCC--CcHHHHHHheecCCeEEE
Confidence            4677999999999999875 34 78888531    1   111223455567777766532  3322211 2446778899


Q ss_pred             EEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||+++  ...|.+.+..+...    -.++.+|...|+-+|...
T Consensus        97 v~e~~~--~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~  138 (292)
T cd06658          97 VMEFLE--GGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQG  138 (292)
T ss_pred             EEeCCC--CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999998  34676666555432    257788888999999764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=94.66  E-value=0.29  Score=39.39  Aligned_cols=106  Identities=12%  Similarity=-0.009  Sum_probs=63.1

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v  113 (165)
                      ++.+|.|....||++.+. ++ .+++|.-.....      .-...+...|.+.|+.+..  |..++-+ ++.+.+...+|
T Consensus         6 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~lv   77 (279)
T cd06619           6 QEILGHGNGGTVYKAYHLLTRRILAVKVIPLDIT------VELQKQIMSELEILYKCDS--PYIIGFYGAFFVENRISIC   77 (279)
T ss_pred             eeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCC------hHHHHHHHHHHHHHHhCCC--CCeeeEEEEEEECCEEEEE
Confidence            467899999999999875 44 788885431110      0112345567777765532  3333322 34466777899


Q ss_pred             EecCCCCchHHHHHHH-cCCCCHHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLI-AGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~-~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++. . .+..... .......++.++...|+-+|...
T Consensus        78 ~e~~~~-~-~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  115 (279)
T cd06619          78 TEFMDG-G-SLDVYRKIPEHVLGRIAVAVVKGLTYLWSLK  115 (279)
T ss_pred             EecCCC-C-ChHHhhcCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999983 3 3322110 00111357888888899888765

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=94.65  E-value=0.099  Score=46.49  Aligned_cols=103  Identities=20%  Similarity=0.210  Sum_probs=65.2

Q ss_pred             eeEeccCCceeEEEEEEeCC-C-----eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC--
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G-----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR--  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g-----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~--  107 (165)
                      -+..||-|.+--||.|.+.+ +     +|+-|.++.....        ..|...|.++|+...-   .+.|.+|+.-+  
T Consensus        81 llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkK--------l~Ra~tE~eIL~~lDH---PFlPTLYa~fet~  149 (459)
T KOG0610|consen   81 LLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKK--------LKRAQTEREILSLLDH---PFLPTLYASFETD  149 (459)
T ss_pred             HHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhH--------HHHHHHHHHHHHhcCC---Cccchhhheeecc
Confidence            45678999999999999874 2     5666666655332        3699999999977644   34677775433  


Q ss_pred             CCceEEEecCCC-CchHHHHHHHcCCCCHH-----HHHHHHHHHHHHHh
Q 045250          108 TMSLIGMRYLEP-PHIILRKGLIAGIKYPL-----LAEHMSEFMAKTLF  150 (165)
Q Consensus       108 e~~~~vMEdl~~-~~~~lr~~l~~g~~~~~-----~a~~iG~~La~~h~  150 (165)
                      +-..++||||++ |.-.||+- +.|+.++.     .|+++--+|=-+|.
T Consensus       150 ~~~cl~meyCpGGdL~~Lrqk-Qp~~~fse~~aRFYaAEvl~ALEYLHm  197 (459)
T KOG0610|consen  150 KYSCLVMEYCPGGDLHSLRQK-QPGKRFSESAARFYAAEVLLALEYLHM  197 (459)
T ss_pred             ceeEEEEecCCCccHHHHHhh-CCCCccchhhHHHHHHHHHHHHHHHHh
Confidence            456789999995 33344442 12455532     33344444444454

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=94.63  E-value=0.63  Score=36.83  Aligned_cols=106  Identities=16%  Similarity=0.070  Sum_probs=66.0

Q ss_pred             eeEeccCCceeEEEEEEeC-CC----eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCC
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRT  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e  108 (165)
                      ..+.+|.|....||++.+. ++    .+.+|.......      .-...+...|.+.|+.+..  | ++.+++  +.+.+
T Consensus         9 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~   79 (268)
T cd05063           9 KQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYT------EKQRQDFLSEASIMGQFSH--H-NIIRLEGVVTKFK   79 (268)
T ss_pred             EeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCC------HHHHHHHHHHHHHHhcCCC--C-CeeEEEEEEccCC
Confidence            3567898988999999874 22    477776543221      0112345567766665532  3 333333  33556


Q ss_pred             CceEEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 045250          109 MSLIGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ...+|||+++  ...|++.+.+.  ...    -.++.++...|..+|...
T Consensus        80 ~~~lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~  127 (268)
T cd05063          80 PAMIITEYME--NGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMN  127 (268)
T ss_pred             CcEEEEEcCC--CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            6789999998  34677777543  222    256778888888888765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=94.63  E-value=0.7  Score=36.72  Aligned_cols=106  Identities=12%  Similarity=0.064  Sum_probs=68.9

Q ss_pred             eeEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c
Q 045250           36 TIKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--D  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D  106 (165)
                      .++.+|.|....||++...      +. .+++|.....      ...--..+...|.++|+.+..  |. +++++.+  +
T Consensus         9 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~------~~~~~~~~~~~E~~~l~~l~h--~~-iv~~~~~~~~   79 (275)
T cd05046           9 EITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKT------KDENLQSEFRRELDMFRKLSH--KN-VVRLLGLCRE   79 (275)
T ss_pred             eeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCc------cchHHHHHHHHHHHHHHhcCC--cc-eeeeEEEECC
Confidence            5677899999999999853      12 5777754311      111224567788888887743  33 3445544  4


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCC---------CC-----HHHHHHHHHHHHHHHhcc
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLIAGI---------KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~~g~---------~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      .+...+|||+++  ...|++.+....         .+     ..++.+|...|+-+|...
T Consensus        80 ~~~~~lv~e~~~--~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~  137 (275)
T cd05046          80 AEPHYMILEYTD--LGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR  137 (275)
T ss_pred             CCcceEEEEecC--CCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC
Confidence            567899999997  457888776533         11     246678888888888553

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=94.63  E-value=0.39  Score=38.65  Aligned_cols=107  Identities=15%  Similarity=0.083  Sum_probs=66.3

Q ss_pred             eeEeccCCceeEEEEEEeCCC------------------eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCC
Q 045250           36 TIKEVGDGNLNFVYIVVGTSG------------------SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPD   97 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~g------------------svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~   97 (165)
                      -++.+|.|....||++.+...                  .+++|.-..-.      -.-..++...|.++|+.+..  |.
T Consensus         9 ~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~------~~~~~~~~~~e~~~l~~l~~--~~   80 (296)
T cd05051           9 FVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA------SDNAREDFLKEVKILSRLSD--PN   80 (296)
T ss_pred             ccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc------CHHHHHHHHHHHHHHHhcCC--CC
Confidence            367889999999999987532                  24555422111      01122345567777777643  43


Q ss_pred             CCceE-EEEcCCCceEEEecCCCCchHHHHHHHcCC-----------CC-----HHHHHHHHHHHHHHHhcc
Q 045250           98 HVPEV-YHFDRTMSLIGMRYLEPPHIILRKGLIAGI-----------KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus        98 ~vP~v-~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~-----------~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      .++-+ ++.+.....++||+++  ..+|.+.+.+..           ..     -.++.++...|+-+|...
T Consensus        81 i~~~~~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~  150 (296)
T cd05051          81 IARLLGVCTVDPPLCMIMEYME--NGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN  150 (296)
T ss_pred             EeEEEEEEecCCCcEEEEecCC--CCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence            33322 2234578899999998  357777776543           11     246788888999999765

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=94.62  E-value=0.23  Score=39.36  Aligned_cols=105  Identities=14%  Similarity=0.063  Sum_probs=62.4

Q ss_pred             EeccCCceeEEEEEEeCCC----eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-------
Q 045250           38 KEVGDGNLNFVYIVVGTSG----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD-------  106 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~~g----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-------  106 (165)
                      +.+|.|....||++.+...    .+.+|.-......     .-..++...|.+.|+.+.   -..+++++.+.       
T Consensus         5 ~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~-----~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~   76 (272)
T cd05075           5 KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICT-----RSEMEDFLSEAVCMKEFD---HPNVMRLIGVCLQTVESE   76 (272)
T ss_pred             cccCcccCceEEEeEEccCCCeeeEEEEecccCcCC-----HHHHHHHHHHHHHHHhCC---CCCcceEEEEEccCCccc
Confidence            4688999999999987643    3666655432111     011244556777777663   23455555431       


Q ss_pred             -CCCceEEEecCCCCchHHHHHHHc------CCC-----CHHHHHHHHHHHHHHHhcc
Q 045250          107 -RTMSLIGMRYLEPPHIILRKGLIA------GIK-----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 -~e~~~~vMEdl~~~~~~lr~~l~~------g~~-----~~~~a~~iG~~La~~h~~t  152 (165)
                       .....++|||++  +.+|.+.+..      ...     .-.++.+|...|+-+|...
T Consensus        77 ~~~~~~~v~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  132 (272)
T cd05075          77 GYPSPVVILPFMK--HGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS  132 (272)
T ss_pred             CCCCcEEEEEeCC--CCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             123579999998  2356665532      111     1246778888899999654

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=94.60  E-value=0.96  Score=36.38  Aligned_cols=105  Identities=16%  Similarity=0.087  Sum_probs=67.2

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      .++.+|.|...-||++... +| .+++|.......   .   -...+...|...|+.+..  |. +++++  +.+.+...
T Consensus         9 ~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~---~~~~~~~~e~~~l~~l~h--~n-i~~~~~~~~~~~~~~   79 (291)
T cd07870           9 NLEKLGEGSYATVYKGISRINGQLVALKVISMKTE---E---GVPFTAIREASLLKGLKH--AN-IVLLHDIIHTKETLT   79 (291)
T ss_pred             EEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc---C---CCcHHHHHHHHHHHhcCC--CC-EeEEEEEEecCCeEE
Confidence            5678999999999999875 44 899998643221   1   112345678888887643  32 33444  34566778


Q ss_pred             EEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++.   .+.+.+...  ...    ..++.+|...|+-+|...
T Consensus        80 lv~e~~~~---~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~  123 (291)
T cd07870          80 FVFEYMHT---DLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQH  123 (291)
T ss_pred             EEEecccC---CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999972   333344332  122    246778888899898765

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=94.60  E-value=0.63  Score=37.71  Aligned_cols=108  Identities=11%  Similarity=0.018  Sum_probs=65.4

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCCCceEE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-DRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~e~~~~v  113 (165)
                      .+.+|.|....||.+.+. ++ .++||.-.+-... .   .-...+...|..+|+.+..  |..++-...+ +.+...+|
T Consensus         5 ~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~-~---~~~~~~~~~E~~il~~l~~--~~i~~~~~~~~~~~~~~lv   78 (285)
T cd05630           5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-K---RKGESMALNEKQILEKVNS--RFVVSLAYAYETKDALCLV   78 (285)
T ss_pred             eEEeecCCCeEEEEEEEcCCCceEEEEEEehhhcc-c---hHHHHHHHHHHHHHHhCCC--CCeeeeeEEEecCCEEEEE
Confidence            456899999999999876 44 7888864322110 0   0112334568888877643  4444444333 44666799


Q ss_pred             EecCCCCchHHHHHHHcCC--CC-----HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIAGI--KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g~--~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  ..+|++.+....  ..     -.++.++...|.-+|...
T Consensus        79 ~e~~~--g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~  122 (285)
T cd05630          79 LTLMN--GGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER  122 (285)
T ss_pred             EEecC--CCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99997  346766664321  12     145677788888888643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=94.59  E-value=0.77  Score=37.34  Aligned_cols=106  Identities=18%  Similarity=0.150  Sum_probs=69.9

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~  112 (165)
                      .++.+|.|...-||++.+. ++ .+++|.....-       .-..++...|...|+....  |..++-. ++.+.+...+
T Consensus        23 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~-------~~~~~~~~~e~~~l~~l~h--p~i~~~~~~~~~~~~~~l   93 (293)
T cd06647          23 RFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ-------QPKKELIINEILVMRENKH--PNIVNYLDSYLVGDELWV   93 (293)
T ss_pred             eeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc-------chHHHHHHHHHHHHhhcCC--CCeeehhheeeeCCcEEE
Confidence            5678999999999999865 44 78889743111       1123556667777776642  4332222 3346778899


Q ss_pred             EEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||+++  ...+++.+.++...    ..++.++...|+.+|...
T Consensus        94 v~e~~~--~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~g  135 (293)
T cd06647          94 VMEYLA--GGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ  135 (293)
T ss_pred             EEecCC--CCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999998  35777777654432    246778888888888654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=94.53  E-value=0.7  Score=36.90  Aligned_cols=105  Identities=11%  Similarity=0.043  Sum_probs=67.4

Q ss_pred             eEeccCCceeEEEEEEeCC-----C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE---cC
Q 045250           37 IKEVGDGNLNFVYIVVGTS-----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF---DR  107 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~-----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~---D~  107 (165)
                      .+.++.|....||++....     + .+++|.......      .....+...|...|+.+.  .|..++ ++++   +.
T Consensus        11 ~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~------~~~~~~~~~e~~~l~~l~--h~ni~~-~~~~~~~~~   81 (280)
T cd05043          11 SDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHAS------EIQVTLLLQESCLLYGLS--HQNILP-ILHVCIEDG   81 (280)
T ss_pred             eeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCC------HHHHHHHHHHHHHHHhCC--CCCCCe-EEEEEecCC
Confidence            3667888888999998754     4 788887543221      122355666777776552  244444 4433   34


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCC--------CC-----HHHHHHHHHHHHHHHhcc
Q 045250          108 TMSLIGMRYLEPPHIILRKGLIAGI--------KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 e~~~~vMEdl~~~~~~lr~~l~~g~--------~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ....+++|+.+  ...|...+....        .+     ..++.+|...|+-+|...
T Consensus        82 ~~~~~~~~~~~--~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~  137 (280)
T cd05043          82 EPPFVLYPYMN--WGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG  137 (280)
T ss_pred             CCCEEEEEcCC--CCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            67888999987  457777775531        11     257788899999898654

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=94.51  E-value=0.38  Score=43.93  Aligned_cols=120  Identities=17%  Similarity=0.055  Sum_probs=74.6

Q ss_pred             eeEeccCCceeEEEEEEeC-CCeE-EEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SGSF-VIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~gsv-IvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      .+.+||-|-.--||.+.-. +|.+ -+|-    ++...---.=-+.-.+.|..+|...   -...|-++|+  -|+++--
T Consensus       145 ~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~----LkKS~M~~~~Qv~hV~aERdiL~~~---ds~~vVKLyYsFQD~~~LY  217 (550)
T KOG0605|consen  145 LLKVIGKGAFGEVRLARKKDTGEIYAMKI----LKKSEMLKKNQVEHVRAERDILAEV---DSPWVVKLYYSFQDKEYLY  217 (550)
T ss_pred             hheeeccccceeEEEEEEccCCcEEeeec----ccHHHHHhhhhHHHHHHHHHHhhhc---CCCcEEEEEEEecCCCeeE
Confidence            6788999999999999865 5643 3332    2211000011234556777787662   2345566653  4778888


Q ss_pred             EEEecCCCCchHHHHHHHcCCCCH-HH----HHHHHHHHHHHHhcc---------------------cccccCchhhhc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKYP-LL----AEHMSEFMAKTLFYT---------------------SLLYRTTTEHKR  164 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~~-~~----a~~iG~~La~~h~~t---------------------sd~~l~~~~kk~  164 (165)
                      +|||||+  +.+++..|+..-..+ +.    +++.--++..+|...                     |||+|.....|.
T Consensus       218 LiMEylP--GGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~  294 (550)
T KOG0605|consen  218 LIMEYLP--GGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKK  294 (550)
T ss_pred             EEEEecC--CccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhh
Confidence            9999999  458888888865442 22    233344455666654                     888888766553

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=94.51  E-value=0.81  Score=37.33  Aligned_cols=107  Identities=15%  Similarity=-0.004  Sum_probs=69.0

Q ss_pred             eeEeccCCceeEEEEEEeCC--------C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--
Q 045250           36 TIKEVGDGNLNFVYIVVGTS--------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--  104 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~--------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--  104 (165)
                      -.++||.|....||++....        + .+++|.-.+....      -...+...|.+.|+.+... |. +++++.  
T Consensus        22 i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~------~~~~~~~~e~~~l~~l~~h-~~-i~~~~~~~   93 (307)
T cd05098          22 LGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATE------KDLSDLISEMEMMKMIGKH-KN-IINLLGAC   93 (307)
T ss_pred             EeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCCh------HHHHHHHHHHHHHHHhcCC-CC-EeeEEEEE
Confidence            44789999999999997531        1 4777765543211      1235666788888877543 43 333332  


Q ss_pred             EcCCCceEEEecCCCCchHHHHHHHcCC-----------------CC----HHHHHHHHHHHHHHHhcc
Q 045250          105 FDRTMSLIGMRYLEPPHIILRKGLIAGI-----------------KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       105 ~D~e~~~~vMEdl~~~~~~lr~~l~~g~-----------------~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .+.....+|||+++  ...|.+.+....                 ..    -.++.++...|+-+|...
T Consensus        94 ~~~~~~~lv~e~~~--~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g  160 (307)
T cd05098          94 TQDGPLYVIVEYAS--KGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK  160 (307)
T ss_pred             ecCCceEEEEecCC--CCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34466779999998  347777776531                 11    146888999999999753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=94.48  E-value=0.52  Score=38.19  Aligned_cols=104  Identities=13%  Similarity=0.091  Sum_probs=66.5

Q ss_pred             EeccCCceeEEEEEEeCC-------------C---eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCce
Q 045250           38 KEVGDGNLNFVYIVVGTS-------------G---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPE  101 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~~-------------g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~  101 (165)
                      +.||.|....||++....             +   .+.||...+....      -..++...|.++|+.+..  | .+++
T Consensus        11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~ei~~l~~l~h--~-~i~~   81 (295)
T cd05097          11 EKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTK------TARNDFLKEIKIMSRLKN--P-NIIR   81 (295)
T ss_pred             hccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCH------HHHHHHHHHHHHHHhCCC--C-CcCe
Confidence            678999999999987531             1   4778877643211      112345567777776643  3 3444


Q ss_pred             EEE--EcCCCceEEEecCCCCchHHHHHHHcCC-------------CC----HHHHHHHHHHHHHHHhcc
Q 045250          102 VYH--FDRTMSLIGMRYLEPPHIILRKGLIAGI-------------KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       102 v~~--~D~e~~~~vMEdl~~~~~~lr~~l~~g~-------------~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ++.  .+.....+|||+++  ...|.+.+....             ..    -.++.++...|+-+|...
T Consensus        82 ~~~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~  149 (295)
T cd05097          82 LLGVCVSDDPLCMITEYME--NGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN  149 (295)
T ss_pred             EEEEEcCCCccEEEEecCC--CCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC
Confidence            443  35667789999998  346766664421             01    246788899999999765

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=94.48  E-value=0.84  Score=37.99  Aligned_cols=107  Identities=14%  Similarity=-0.026  Sum_probs=63.2

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -++.||.|....||++... ++ .+++|.-...-...    .........|..+++...   ...++.++.  .+.+...
T Consensus         5 i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~e~~~l~~~~---~~~i~~l~~~~~~~~~~~   77 (331)
T cd05624           5 IIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLK----RAETACFREERNVLVNGD---CQWITTLHYAFQDENYLY   77 (331)
T ss_pred             EEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHh----hHHHHHHHHHHHHHHhCC---CCCEeeEEEEEEcCCEEE
Confidence            3578999999999999876 34 68888643211000    011223344555554332   223444432  3556677


Q ss_pred             EEEecCCCCchHHHHHHHcC-C-CCH----HHHHHHHHHHHHHHhc
Q 045250          112 IGMRYLEPPHIILRKGLIAG-I-KYP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g-~-~~~----~~a~~iG~~La~~h~~  151 (165)
                      +||||++  +..|.+.+.+. . ...    .++.+|...|.-+|..
T Consensus        78 lv~Ey~~--gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~  121 (331)
T cd05624          78 LVMDYYV--GGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQL  121 (331)
T ss_pred             EEEeCCC--CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999998  34777777652 2 222    3456778888888854

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=94.47  E-value=0.59  Score=37.01  Aligned_cols=104  Identities=13%  Similarity=0.038  Sum_probs=66.1

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c------
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--D------  106 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D------  106 (165)
                      ++.+|.|....||++... ++ .+++|.-...        .-...+...|...|+.+... |.. .+++.+  +      
T Consensus        11 ~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~--------~~~~~~~~~e~~~l~~~~~h-~~i-~~~~~~~~~~~~~~~   80 (272)
T cd06637          11 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT--------GDEEEEIKQEINMLKKYSHH-RNI-ATYYGAFIKKNPPGM   80 (272)
T ss_pred             HHheeecCCeEEEEEEEcCCCcEEEEEEEEcC--------CccHHHHHHHHHHHHHhcCC-CCe-eeEeeEEeecCCCCC
Confidence            456888888889999875 34 6888864311        12235677788888776442 333 333322  1      


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhcc
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      .....++||+++  ...|.+.+...  ...     -.++.++...|+-+|...
T Consensus        81 ~~~~~iv~e~~~--~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~  131 (272)
T cd06637          81 DDQLWLVMEFCG--AGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK  131 (272)
T ss_pred             CcEEEEEEEcCC--CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            234679999998  34777766652  222     247788899999999764

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=94.45  E-value=0.88  Score=36.31  Aligned_cols=102  Identities=12%  Similarity=0.084  Sum_probs=60.8

Q ss_pred             eccCCceeEEEEEEeCC-------------C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE
Q 045250           39 EVGDGNLNFVYIVVGTS-------------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH  104 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~~-------------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~  104 (165)
                      .+|.|..+.||+.....             . .+++|.-.+.-+       -...+...|+..|+.+.   -.++++++.
T Consensus         2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~-------~~~~~~~~~~~~l~~l~---hp~iv~~~~   71 (262)
T cd05077           2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHR-------DISLAFFETASMMRQVS---HKHIVLLYG   71 (262)
T ss_pred             ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhh-------hHHHHHHHHHHHHHhCC---CCCEeeEEE
Confidence            57889999999987431             1 366665322111       11123344555555443   234555554


Q ss_pred             --EcCCCceEEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 045250          105 --FDRTMSLIGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       105 --~D~e~~~~vMEdl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t  152 (165)
                        .+.....++||+++  ...|...+...  ...    -.++.+|...|+-+|...
T Consensus        72 ~~~~~~~~~lv~e~~~--~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  125 (262)
T cd05077          72 VCVRDVENIMVEEFVE--FGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKD  125 (262)
T ss_pred             EEecCCCCEEEEeccc--CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCC
Confidence              46678899999998  34566655432  222    257888999999999654

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=94.42  E-value=0.62  Score=37.10  Aligned_cols=105  Identities=19%  Similarity=0.221  Sum_probs=62.4

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      .++.+|.|....||++.+. +| .+++|+...-...      -...+...|...+..... .|..+ +++  +.+.....
T Consensus         5 ~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~e~~~~~~~~~-~~~iv-~~~~~~~~~~~~~   76 (283)
T cd06617           5 VIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS------QEQKRLLMDLDISMRSVD-CPYTV-TFYGALFREGDVW   76 (283)
T ss_pred             EEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc------HHHHHHHHHHHHHHHHcC-CCCee-eeeEEEecCCcEE
Confidence            3577899999999999886 45 8999976533211      112355555554332222 23333 333  34566778


Q ss_pred             EEEecCCCCchHHHHHHHc----CCCC-----HHHHHHHHHHHHHHHhc
Q 045250          112 IGMRYLEPPHIILRKGLIA----GIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~----g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      ++||+++.   .+.+.+..    +..+     -.++.+|...|.-+|..
T Consensus        77 lv~e~~~~---~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~  122 (283)
T cd06617          77 ICMEVMDT---SLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSK  122 (283)
T ss_pred             EEhhhhcc---cHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence            99999973   33333322    2222     25678888889989864

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=94.41  E-value=0.59  Score=40.49  Aligned_cols=104  Identities=16%  Similarity=0.038  Sum_probs=71.5

Q ss_pred             EeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC-C-CceEEE
Q 045250           38 KEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR-T-MSLIGM  114 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~-e-~~~~vM  114 (165)
                      ..+|.|-...|||....+| .|.||+-.+..      ... ......|.++|..++ + |..|+=+=++.+ + ..++|.
T Consensus        81 ~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~------~~~-~~eF~~Ei~~ls~l~-H-~Nlv~LlGyC~e~~~~~~LVY  151 (361)
T KOG1187|consen   81 NLIGEGGFGTVYKGVLSDGTVVAVKRLSSNS------GQG-EREFLNEVEILSRLR-H-PNLVKLLGYCLEGGEHRLLVY  151 (361)
T ss_pred             cceecCCCeEEEEEEECCCCEEEEEEecCCC------Ccc-hhHHHHHHHHHhcCC-C-cCcccEEEEEecCCceEEEEE
Confidence            4577777889999999987 89999322221      111 223777888887766 2 555554333333 3 279999


Q ss_pred             ecCCCCchHHHHHHHcCCC-------CHHHHHHHHHHHHHHHhcc
Q 045250          115 RYLEPPHIILRKGLIAGIK-------YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 Edl~~~~~~lr~~l~~g~~-------~~~~a~~iG~~La~~h~~t  152 (165)
                      ||.+ ++ +|.+.|.....       .-.+|..++..|+-+|...
T Consensus       152 Eym~-nG-sL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~  194 (361)
T KOG1187|consen  152 EYMP-NG-SLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGC  194 (361)
T ss_pred             EccC-CC-CHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCC
Confidence            9999 44 88887766542       2379999999999999866

>PHA03211 serine/threonine kinase US3; Provisional

Probab=94.39  E-value=0.73  Score=41.12  Aligned_cols=98  Identities=13%  Similarity=0.057  Sum_probs=67.4

Q ss_pred             eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -...||.|....||++.... + .|+||...             ..+...|+++|+.+..  | ++.+++.  .+.....
T Consensus       173 i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~-------------~~~~~~E~~iL~~L~H--p-nIv~l~~~~~~~~~~~  236 (461)
T PHA03211        173 IHRALTPGSEGCVFESSHPDYPQRVVVKAGW-------------YASSVHEARLLRRLSH--P-AVLALLDVRVVGGLTC  236 (461)
T ss_pred             EEEEEccCCCeEEEEEEECCCCCEEEEeccc-------------ccCHHHHHHHHHHCCC--C-CCCcEEEEEEECCEEE
Confidence            45679999999999999874 4 79999521             1234568888887743  3 3444543  4567788


Q ss_pred             EEEecCCCCchHHHHHHHcCC--C----CHHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGI--K----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~--~----~~~~a~~iG~~La~~h~~t  152 (165)
                      +|||++..   .|...+....  .    .-.++.+|...|+-+|...
T Consensus       237 lv~e~~~~---~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g  280 (461)
T PHA03211        237 LVLPKYRS---DLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEG  280 (461)
T ss_pred             EEEEccCC---CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999972   4555554421  1    1368889999999999764

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=94.31  E-value=0.8  Score=37.97  Aligned_cols=105  Identities=16%  Similarity=0.245  Sum_probs=66.0

Q ss_pred             EeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE----cCCCce
Q 045250           38 KEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF----DRTMSL  111 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~----D~e~~~  111 (165)
                      +.+|.|....||++.+. +| .++||.-....+.  .   -...+...|...|+.+... |..++ ++.+    +.....
T Consensus        13 ~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~--~---~~~~~~~~E~~~l~~l~~h-~ni~~-~~~~~~~~~~~~~~   85 (337)
T cd07852          13 QKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRN--A---TDAQRTFREIMFLQELGDH-PNIVK-LLNVIKAENDKDIY   85 (337)
T ss_pred             HhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCc--c---hhhhhhhHHHHHHHHhcCC-CCccc-eeeeeccCCCceEE
Confidence            45777777789999876 34 7888976432221  1   1123455688888777332 44443 4433    223468


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++ .  .|...+..+...    -.++.+|...|+-+|...
T Consensus        86 lv~e~~~-~--~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~  127 (337)
T cd07852          86 LVFEYME-T--DLHAVIRANILEDVHKRYIMYQLLKALKYIHSGN  127 (337)
T ss_pred             EEecccc-c--CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998 2  677766655322    147788899999998753

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=94.30  E-value=0.59  Score=40.65  Aligned_cols=84  Identities=15%  Similarity=0.018  Sum_probs=53.9

Q ss_pred             eeEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c
Q 045250           36 TIKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--D  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D  106 (165)
                      -.+.||.|....||++...      .+ .+.||.-.+....      ...++...|.++|+.+... |. +++++.+  +
T Consensus        41 ~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~------~~~~~~~~Ei~~l~~l~~H-pn-Iv~l~~~~~~  112 (400)
T cd05105          41 LGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARS------SEKQALMSELKIMTHLGPH-LN-IVNLLGACTK  112 (400)
T ss_pred             hhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCCh------HHHHHHHHHHHHHHhcCCC-CC-eeeEEEEEcc
Confidence            3578999999999998753      12 4777865433221      1235677788888877543 43 4445443  4


Q ss_pred             CCCceEEEecCCCCchHHHHHHH
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLI  129 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~  129 (165)
                      .....+||||++  ..+|.+.|.
T Consensus       113 ~~~~~lv~Ey~~--~g~L~~~l~  133 (400)
T cd05105         113 SGPIYIITEYCF--YGDLVNYLH  133 (400)
T ss_pred             CCceEEEEEecC--CCcHHHHHH
Confidence            566899999998  336655554

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=94.28  E-value=1.3  Score=36.73  Aligned_cols=106  Identities=16%  Similarity=0.128  Sum_probs=69.2

Q ss_pred             eEeccCCceeEEEEEEeC-C--C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc------
Q 045250           37 IKEVGDGNLNFVYIVVGT-S--G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD------  106 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~--g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D------  106 (165)
                      .+.+|.|....||++.+. .  + .+++|.-......     .....+...|.++|+.+... | .+++++.++      
T Consensus         5 ~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~E~~~l~~l~~h-~-~iv~~~~~~~~~~~~   77 (332)
T cd07857           5 IKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSK-----KILAKRALRELKLLRHFRGH-K-NITCLYDMDIVFPGN   77 (332)
T ss_pred             EEEccccCCeEEEEEEeCCCCcCceEEEEEecccccc-----chhHHHHHHHHHHHHHhcCC-C-Chheeeeeeeecccc
Confidence            467889999999999976 3  5 7888875422211     12345777899998887543 3 344555432      


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      .....++||+++ .  .|.+.+..+..+     -.++.+|...|..+|...
T Consensus        78 ~~~~~~~~e~~~-~--~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~g  125 (332)
T cd07857          78 FNELYLYEELME-A--DLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSAN  125 (332)
T ss_pred             CCcEEEEEeccc-C--CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            133457778776 2  577777665443     247788899999999765

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=94.27  E-value=0.65  Score=37.55  Aligned_cols=108  Identities=12%  Similarity=0.034  Sum_probs=66.0

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCCCceEE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH-FDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~e~~~~v  113 (165)
                      ++.+|.|....||++.+. ++ .+.||+-....-. .   .....+...|..+|+.++.  |..++-... -+.+...+|
T Consensus         5 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~---~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~lv   78 (285)
T cd05605           5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-K---RKGEAMALNEKQILEKVNS--RFVVSLAYAYETKDALCLV   78 (285)
T ss_pred             EEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhh-h---hhhHHHHHHHHHHHHhcCC--CCEeeeeeeecCCCeEEEE
Confidence            567899999999999875 45 6888875432110 0   0112334568888877753  444443322 355678899


Q ss_pred             EecCCCCchHHHHHHHc-CC-CC-H----HHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIA-GI-KY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~-g~-~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      |||+.  ...|...+.. +. .+ .    .++.++...|.-+|...
T Consensus        79 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  122 (285)
T cd05605          79 LTLMN--GGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER  122 (285)
T ss_pred             EeccC--CCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99997  3466655533 21 22 2    35677788888888543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>PTZ00284 protein kinase; Provisional

Probab=94.23  E-value=0.81  Score=40.21  Aligned_cols=104  Identities=11%  Similarity=0.001  Sum_probs=65.8

Q ss_pred             eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCC---CCCceEEEE---cC
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCP---DHVPEVYHF---DR  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p---~~vP~v~~~---D~  107 (165)
                      -+..||.|....||++.+.. + .|.||.-....        ........|..+|+.+.....   ..++.++.|   +.
T Consensus       133 i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~--------~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~  204 (467)
T PTZ00284        133 ILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP--------KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNET  204 (467)
T ss_pred             EEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch--------hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCC
Confidence            35679999999999998763 4 78899753211        112345678888887765321   124444433   22


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCC-CC----HHHHHHHHHHHHHHHh
Q 045250          108 TMSLIGMRYLEPPHIILRKGLIAGI-KY----PLLAEHMSEFMAKTLF  150 (165)
Q Consensus       108 e~~~~vMEdl~~~~~~lr~~l~~g~-~~----~~~a~~iG~~La~~h~  150 (165)
                      ....+|||++++   .+.+.+.+.. ..    ..++.+|...|.-+|.
T Consensus       205 ~~~~iv~~~~g~---~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~  249 (467)
T PTZ00284        205 GHMCIVMPKYGP---CLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHT  249 (467)
T ss_pred             ceEEEEEeccCC---CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            456789998873   3444454432 22    2577888899999996

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=94.22  E-value=0.64  Score=42.61  Aligned_cols=109  Identities=23%  Similarity=0.189  Sum_probs=67.3

Q ss_pred             cceeEeccCCceeEEEEEEeCC-C-eEEEEecCcccccc------------------CCC-CCCChH-------------
Q 045250           34 DLTIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCI------------------GES-WPMTKE-------------   79 (165)
Q Consensus        34 ~~~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~------------------~~~-~~l~~~-------------   79 (165)
                      ..+.++++.|.+--|+++.+.+ | .|+||--+|-++..                  .++ ..++..             
T Consensus       121 ~fd~~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~E  200 (537)
T PRK04750        121 DFDIKPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDE  200 (537)
T ss_pred             hcChhhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHh
Confidence            4566899999999999999976 7 89999999886210                  011 112211             


Q ss_pred             -HHHHHHHHHHHhhccC----CCCCceEEEEcCCCceEEEecCCCCchHHHH--HHHc-CCCCHHHHHHHHHH
Q 045250           80 -RAYFEALALKEHGKLC----PDHVPEVYHFDRTMSLIGMRYLEPPHIILRK--GLIA-GIKYPLLAEHMSEF  144 (165)
Q Consensus        80 -R~~~E~~~L~~~~~~~----p~~vP~v~~~D~e~~~~vMEdl~~~~~~lr~--~l~~-g~~~~~~a~~iG~~  144 (165)
                       ....|++.+..+.+..    .-+||++|.---...++|||++. + ..+.+  .+.+ |.....+|+.....
T Consensus       201 lD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~-G-~~l~d~~~l~~~g~d~~~la~~~v~~  271 (537)
T PRK04750        201 LDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMY-G-IPVSDVAALRAAGTDMKLLAERGVEV  271 (537)
T ss_pred             hCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeec-C-ccHHhHHHHHhcCCCHHHHHHHHHHH
Confidence             1234555555554432    23799999644678999999998 3 34433  2333 32224566554433

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=94.20  E-value=0.51  Score=37.04  Aligned_cols=103  Identities=12%  Similarity=-0.043  Sum_probs=66.9

Q ss_pred             eccCCceeEEEEEEeCC--C---eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 045250           39 EVGDGNLNFVYIVVGTS--G---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~~--g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~  112 (165)
                      .+|.|....||++...+  +   .+.||.-......      -...+...|...|+.+..  |..+.-. +.++ ....+
T Consensus         2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~-~~~~~   72 (257)
T cd05040           2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS------DIMDDFLKEAAIMHSLDH--ENLIRLYGVVLT-HPLMM   72 (257)
T ss_pred             cCCccCcccEEeeeEecCCCCceEEEEeecCCcccH------HHHHHHHHHHHHHhhcCC--CCccceeEEEcC-CeEEE
Confidence            57889999999998643  2   4778876543321      234566778888877753  3322211 2344 67789


Q ss_pred             EEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +||+++  ...|++.+.+..   ..    ..++.++...|+.+|...
T Consensus        73 v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~  117 (257)
T cd05040          73 VTELAP--LGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR  117 (257)
T ss_pred             EEEecC--CCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC
Confidence            999997  457777776533   11    246678899999998764

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=94.19  E-value=0.69  Score=36.91  Aligned_cols=107  Identities=15%  Similarity=0.065  Sum_probs=67.8

Q ss_pred             eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV--YHFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~e~~~  111 (165)
                      .++.+|.|....||++.+.+ | .+++|.-....     ....-.+....|.++|+.+..  |. ++++  ++.+.....
T Consensus         5 ~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~-----~~~~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~~~~~~   76 (286)
T cd07846           5 NLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESE-----DDKMVKKIAMREIRMLKQLRH--EN-LVNLIEVFRRKKRLY   76 (286)
T ss_pred             EeeeeccCCCeEEEEEEECCCCCEEEEEeHhhcc-----CcchhhHHHHHHHHHHHhcCC--cc-hhhHHHhcccCCeEE
Confidence            45778999999999999863 4 78888743211     112223445667788877643  22 2222  234667789


Q ss_pred             EEEecCCCCchHHHHHHHcCC-CC----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGI-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  ...+........ ..    -.++.+|...|+-+|...
T Consensus        77 lv~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~  120 (286)
T cd07846          77 LVFEFVD--HTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHN  120 (286)
T ss_pred             EEEecCC--ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  345655443332 21    356778889999999765

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=94.19  E-value=1.1  Score=35.00  Aligned_cols=107  Identities=20%  Similarity=0.120  Sum_probs=66.8

Q ss_pred             eEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250           37 IKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v  113 (165)
                      .+.++.|...-||++.+.. | .+++|.-... ...    .-..++...|+..|+.+..  |..++-. ...+.....++
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~-~~~----~~~~~~~~~E~~~l~~~~h--~~i~~~~~~~~~~~~~~lv   77 (257)
T cd08225           5 IKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLT-KMP----VKEKEASKKEVILLAKMKH--PNIVTFFASFQENGRLFIV   77 (257)
T ss_pred             EEEecCCCcceEEEEEEcCCCceEEEEEeeHh-hcc----chhhHHHHHHHHHHHhCCC--CChhhhhheeccCCeEEEE
Confidence            4678888888999998863 4 7888863221 110    0123456678888877753  3322222 23355667899


Q ss_pred             EecCCCCchHHHHHHHcCC--C-C----HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIAGI--K-Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g~--~-~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  ...|.+.+....  . .    -.++.++...|+-+|...
T Consensus        78 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~  121 (257)
T cd08225          78 MEYCD--GGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK  121 (257)
T ss_pred             EecCC--CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99998  457777665432  1 1    246678888888888643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>PHA03209 serine/threonine kinase US3; Provisional

Probab=94.16  E-value=0.81  Score=38.65  Aligned_cols=98  Identities=14%  Similarity=0.130  Sum_probs=66.3

Q ss_pred             eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      .+..+|.|...-||++.... + .+++|....             .+...|+.+|+.+..  | .+++++  +.+.....
T Consensus        70 ~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~-------------~~~~~E~~~l~~l~h--~-~iv~~~~~~~~~~~~~  133 (357)
T PHA03209         70 VIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK-------------GTTLIEAMLLQNVNH--P-SVIRMKDTLVSGAITC  133 (357)
T ss_pred             EEEEecCCCCeEEEEEEECCCCceEEEEeCCc-------------cccHHHHHHHHhCCC--C-CCcChhheEEeCCeeE
Confidence            56788999999999998863 3 788886321             233568888887653  3 334443  44667788


Q ss_pred             EEEecCCCCchHHHHHHHcC-CCC-----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAG-IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g-~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||++..   .+.+.+... ...     -.++.+|...|+-+|...
T Consensus       134 lv~e~~~~---~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  177 (357)
T PHA03209        134 MVLPHYSS---DLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQR  177 (357)
T ss_pred             EEEEccCC---cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999972   455555442 221     257788999999999764

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=94.15  E-value=1.8  Score=34.77  Aligned_cols=107  Identities=11%  Similarity=-0.019  Sum_probs=66.1

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cC-----
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-DR-----  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~-----  107 (165)
                      .+..+|.|....||++.+. +| .++||.-.....    .... ..+...|.++|+.+..  |..++-.-.+ +.     
T Consensus        16 ~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~----~~~~-~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~~   88 (310)
T cd07865          16 KLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE----KEGF-PITALREIKILQLLKH--ENVVNLIEICRTKATPYN   88 (310)
T ss_pred             EEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCC----cCCc-hhHHHHHHHHHHhCCC--CCccceEEEEeccccccc
Confidence            5678999999999999876 45 788886432111    1111 1244568888877743  5444433222 22     


Q ss_pred             ---CCceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250          108 ---TMSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 ---e~~~~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                         ....+|||+++.   .+.+.+....  ..    -.++.+|...|.-+|...
T Consensus        89 ~~~~~~~lv~e~~~~---~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~  139 (310)
T cd07865          89 RYKGSFYLVFEFCEH---DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNK  139 (310)
T ss_pred             CCCceEEEEEcCCCc---CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence               234899999983   4555555432  21    257788888999898764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=94.11  E-value=1  Score=37.22  Aligned_cols=109  Identities=12%  Similarity=0.026  Sum_probs=66.8

Q ss_pred             EeccCCceeEEEEEEeC-CC-eEEEEecCccccccCC-------CCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEc
Q 045250           38 KEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGE-------SWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFD  106 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~-------~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D  106 (165)
                      ..+|.|....||++.+. .| .++||...........       +..--..+...|.++|+.+..  |. ++.++  +.+
T Consensus        15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~~-iv~~~~~~~~   91 (335)
T PTZ00024         15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKH--EN-IMGLVDVYVE   91 (335)
T ss_pred             hcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCC--cc-eeeeeEEEec
Confidence            45888888899999876 45 7888875422110000       000111245667777877643  33 33333  346


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      .+...++||+++.   .+.+.+......     ..++.+|...|..+|...
T Consensus        92 ~~~~~lv~e~~~~---~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~  139 (335)
T PTZ00024         92 GDFINLVMDIMAS---DLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWY  139 (335)
T ss_pred             CCcEEEEEecccc---CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            6778899999972   566666543322     257888888999999765

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=94.08  E-value=0.92  Score=36.58  Aligned_cols=106  Identities=20%  Similarity=0.173  Sum_probs=65.7

Q ss_pred             eeEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--Ec
Q 045250           36 TIKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FD  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D  106 (165)
                      -++.+|.|....||++...      .+ .+.||.-....     . .-...+...|..+|+.+.  .| ++++++.  .+
T Consensus        10 i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-----~-~~~~~~~~~e~~~l~~l~--~~-~i~~~~~~~~~   80 (288)
T cd05061          10 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-----S-LRERIEFLNEASVMKGFT--CH-HVVRLLGVVSK   80 (288)
T ss_pred             eeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC-----C-HHHHHHHHHHHHHHHhCC--CC-CeeeEEEEEcC
Confidence            4678999999999998642      12 57777522110     0 011234455767776664  24 4555553  45


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCC---------------CHHHHHHHHHHHHHHHhcc
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLIAGIK---------------YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~~g~~---------------~~~~a~~iG~~La~~h~~t  152 (165)
                      .....+||||++  ..+|.+.+.....               .-.++.+|...|+-+|...
T Consensus        81 ~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~  139 (288)
T cd05061          81 GQPTLVVMELMA--HGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK  139 (288)
T ss_pred             CCCcEEEEeCCC--CCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            667899999997  3477777754210               1247778888888888754

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>PRK10345 hypothetical protein; Provisional

Probab=94.08  E-value=1.3  Score=35.41  Aligned_cols=108  Identities=13%  Similarity=-0.019  Sum_probs=69.5

Q ss_pred             eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhcc--CCCCCceEEEEcCCCc---
Q 045250           36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKL--CPDHVPEVYHFDRTMS---  110 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~--~p~~vP~v~~~D~e~~---  110 (165)
                      +.+.||.|..-.||+ .-.++..+||...+.-.       -..+....|...|+.+...  .-.++|++|.+-.++.   
T Consensus         6 ~~~~LG~G~~~~Vy~-hp~~~~k~IKv~~~~~~-------~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g   77 (210)
T PRK10345          6 EQSPLGTGRHRKCYA-HPEDAQRCIKIVYHRGD-------GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTG   77 (210)
T ss_pred             CcceecCCCceEEEE-CCCCcCeEEEEEecccc-------chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCe
Confidence            457899999999996 32345557888754211       1336789999999988541  1245888887776663   


Q ss_pred             -e--EEEecCCCCchHHHHHHHcCCCCHH---HHHHHHHHHHHHHhc
Q 045250          111 -L--IGMRYLEPPHIILRKGLIAGIKYPL---LAEHMSEFMAKTLFY  151 (165)
Q Consensus       111 -~--~vMEdl~~~~~~lr~~l~~g~~~~~---~a~~iG~~La~~h~~  151 (165)
                       +  +|||+.+....+|.+.+.++...+.   +.+.+-.++..+|..
T Consensus        78 ~v~~~I~e~~G~~~~tL~~~l~~~~~~e~~~~~~~~L~~l~~yLh~~  124 (210)
T PRK10345         78 YVYDVIADFDGKPSITLTEFAEQCRYEEDVAQLRQLLKKLKRYLLDN  124 (210)
T ss_pred             EEEEEEecCCCCcchhHHHHHHcccccHhHHHHHHHHHHHHHHHHHC
Confidence             2  6799854336799999977653332   334444444566653

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=94.06  E-value=0.44  Score=38.92  Aligned_cols=107  Identities=15%  Similarity=0.016  Sum_probs=65.4

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-----eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCC
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTM  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~  109 (165)
                      .++.+|.|....||++.+. +|     .+++|...+-      ..+-...+...|..+++.+..  |..+.-.-.+....
T Consensus        11 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~~~e~~~~~~l~h--~niv~~~~~~~~~~   82 (303)
T cd05110          11 RVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNET------TGPKANVEFMDEALIMASMDH--PHLVRLLGVCLSPT   82 (303)
T ss_pred             eccccccCCCccEEEEEEecCCCcceeeEEEEecccc------CCHHHHHHHHHHHHHHHhCCC--CCcccEEEEEcCCC
Confidence            5567999999999999864 33     2455654321      112222344556666665532  44444443444556


Q ss_pred             ceEEEecCCCCchHHHHHHHcCC--C----CHHHHHHHHHHHHHHHhcc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGI--K----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~--~----~~~~a~~iG~~La~~h~~t  152 (165)
                      ..++||+++ . ..+.+.+....  .    .-.++.++...|+-+|...
T Consensus        83 ~~~v~e~~~-~-g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~  129 (303)
T cd05110          83 IQLVTQLMP-H-GCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR  129 (303)
T ss_pred             ceeeehhcC-C-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcC
Confidence            779999998 3 35666665532  1    1356788999999999764

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=94.04  E-value=1.2  Score=36.55  Aligned_cols=108  Identities=12%  Similarity=0.063  Sum_probs=65.6

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~  112 (165)
                      ....+|.|...-||++.+. +| .+++|.-......    ..-...+...|.+.|+.+..  |..++-. ++.+.+...+
T Consensus        25 ~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~----~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~l   98 (313)
T cd06633          25 GLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQ----TNEKWQDIIKEVKFLQQLKH--PNTIEYKGCYLKEHTAWL   98 (313)
T ss_pred             cceeeccCCCeEEEEEEECCCCcEEEEEEEeccccC----chHHHHHHHHHHHHHHhCCC--CCCccEEEEEEeCCEEEE
Confidence            4567999999999999875 44 6777755322111    11122355667777777642  3333222 2346677889


Q ss_pred             EEecCCCCchHHHHHHHc-CCC-C----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIA-GIK-Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~-g~~-~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||++++   .+-+.+.. +.. .    -.++.+|...|+-+|...
T Consensus        99 v~e~~~~---~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~g  141 (313)
T cd06633          99 VMEYCLG---SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN  141 (313)
T ss_pred             EEecCCC---CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999973   23333332 222 1    136678888888898765

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=94.03  E-value=0.65  Score=38.18  Aligned_cols=105  Identities=14%  Similarity=0.102  Sum_probs=69.5

Q ss_pred             eEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC----
Q 045250           37 IKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRT----  108 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e----  108 (165)
                      .+.+|.|....||++.+.+ | .++||.-.+....     .....+...|.++|+.+.  .|..++ ++.+  +.+    
T Consensus         5 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-----~~~~~~~~~e~~~l~~l~--~~~i~~-~~~~~~~~~~~~~   76 (330)
T cd07834           5 LKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDD-----LIDAKRILREIKLLRHLR--HENIIG-LLDILRPPSPEDF   76 (330)
T ss_pred             eeeecCCCCeEEEEEEeCCCCcEEEEEeecccccc-----chhhhhHHHHHHHHHhcC--Ccchhh-hhhhhcccCcccc
Confidence            4568888889999999864 5 8899976543321     233457777888888775  233222 2222  222    


Q ss_pred             -CceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          109 -MSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 -~~~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                       ...++||+++ .  .+.+.+.++...     -.++.+|...|+-+|...
T Consensus        77 ~~~~lv~e~~~-~--~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~g  123 (330)
T cd07834          77 NDVYIVTELME-T--DLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSAN  123 (330)
T ss_pred             cceEEEecchh-h--hHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             4579999998 2  577777665332     247788888999898765

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=94.01  E-value=1  Score=35.93  Aligned_cols=105  Identities=14%  Similarity=0.038  Sum_probs=65.8

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-------
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD-------  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-------  106 (165)
                      -++.+|.|....||++.+. .+ .+++|.....-        ....+...|..+++.+...  ..+.+++.+-       
T Consensus        20 ~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~--------~~~~~~~~e~~~l~~~~~h--~~i~~~~~~~~~~~~~~   89 (282)
T cd06636          20 LVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE--------DEEEEIKLEINMLKKYSHH--RNIATYYGAFIKKSPPG   89 (282)
T ss_pred             hheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh--------HHHHHHHHHHHHHHHhcCC--CcEEEEeeehhcccccC
Confidence            3578899999999999885 34 78888642110        1224566677777776432  2334444332       


Q ss_pred             -CCCceEEEecCCCCchHHHHHHHcC--C-CC----HHHHHHHHHHHHHHHhcc
Q 045250          107 -RTMSLIGMRYLEPPHIILRKGLIAG--I-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 -~e~~~~vMEdl~~~~~~lr~~l~~g--~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                       .+...++|||++  ...+...+...  . ..    -.++.+|...|+.+|...
T Consensus        90 ~~~~~~iv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~  141 (282)
T cd06636          90 HDDQLWLVMEFCG--AGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK  141 (282)
T ss_pred             CCCEEEEEEEeCC--CCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             345579999998  34565555432  2 22    135678999999999764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=94.01  E-value=0.81  Score=45.00  Aligned_cols=107  Identities=16%  Similarity=0.137  Sum_probs=67.6

Q ss_pred             eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcC--CCc
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH-FDR--TMS  110 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~--e~~  110 (165)
                      -+..||.|....||++.+.. + .+++|.-.... ..    .-...+...|..+|+.+..  |..++-+-. ++.  ...
T Consensus        17 Il~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~-l~----e~~~~~~~~EI~IL~~L~H--PNIVrl~d~f~de~~~~l   89 (1021)
T PTZ00266         17 VIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRG-LK----EREKSQLVIEVNVMRELKH--KNIVRYIDRFLNKANQKL   89 (1021)
T ss_pred             EEEEEecCCCeEEEEEEECCCCeEEEEEEEeccc-cC----HHHHHHHHHHHHHHHHcCC--CCcCeEEEEEEecCCCEE
Confidence            56789999999999999864 3 56777543211 10    0123566778888887753  444433222 233  336


Q ss_pred             eEEEecCCCCchHHHHHHHc-----CCCC----HHHHHHHHHHHHHHHhc
Q 045250          111 LIGMRYLEPPHIILRKGLIA-----GIKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       111 ~~vMEdl~~~~~~lr~~l~~-----g~~~----~~~a~~iG~~La~~h~~  151 (165)
                      .+||||++  ...|.+.|..     +.+.    -.++.+|...|+-+|..
T Consensus        90 yIVMEY~~--gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~  137 (1021)
T PTZ00266         90 YILMEFCD--AGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNL  137 (1021)
T ss_pred             EEEEeCCC--CCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            79999998  3466555543     2232    25778899999999974

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=93.99  E-value=0.77  Score=36.50  Aligned_cols=104  Identities=15%  Similarity=0.077  Sum_probs=66.5

Q ss_pred             eEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcC
Q 045250           37 IKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV--YHFDR  107 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~  107 (165)
                      .+.+|.|....||++...      ++ .++||.-....      ..-...+...|+++|+.+..  |. +.++  ++.+.
T Consensus        10 ~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~e~~~l~~l~~--~~-i~~~~~~~~~~   80 (280)
T cd05049          10 KRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA------SNDARKDFEREAELLTNFQH--EN-IVKFYGVCTEG   80 (280)
T ss_pred             HhhccccCCceEeeeeeccccCcCCcceEEEEeecccC------CHHHHHHHHHHHHHHHhcCC--CC-chheeeEEecC
Confidence            456888888899998753      22 68888643211      11123567778888887643  33 3333  34455


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCC---------------C----CHHHHHHHHHHHHHHHhc
Q 045250          108 TMSLIGMRYLEPPHIILRKGLIAGI---------------K----YPLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       108 e~~~~vMEdl~~~~~~lr~~l~~g~---------------~----~~~~a~~iG~~La~~h~~  151 (165)
                      ....++||+++  ..+|++.+....               .    .-.++.+|...|+.+|..
T Consensus        81 ~~~~lv~e~~~--~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~  141 (280)
T cd05049          81 DPPIMVFEYME--HGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ  141 (280)
T ss_pred             CCeEEEEecCC--CCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC
Confidence            77899999998  357877775421               1    124677888888888864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=93.96  E-value=0.33  Score=38.50  Aligned_cols=103  Identities=12%  Similarity=0.028  Sum_probs=61.5

Q ss_pred             eccCCceeEEEEEEeCC-C--------eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCC
Q 045250           39 EVGDGNLNFVYIVVGTS-G--------SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRT  108 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~~-g--------svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e  108 (165)
                      .+|.|....||++.... +        .+++|....-.       .-..++...|...|+....  |..+.-. ++.+.+
T Consensus         2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~e~~~l~~~~h--~~iv~~~~~~~~~~   72 (258)
T cd05078           2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH-------RNYSESFFEAASMMSQLSH--KHLVLNYGVCVCGD   72 (258)
T ss_pred             CCCcccchhheeeeecccccccccccchhhHHhhcchh-------HHHHHHHHHHHHHHHhCCC--CChhheeeEEEeCC
Confidence            57888889999997642 1        24444432111       1112344556666665432  3333222 344557


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCC--C----HHHHHHHHHHHHHHHhcc
Q 045250          109 MSLIGMRYLEPPHIILRKGLIAGIK--Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdl~~~~~~lr~~l~~g~~--~----~~~a~~iG~~La~~h~~t  152 (165)
                      ...+||||++  ...|.+.+..+..  .    -.++.+|...|+-+|...
T Consensus        73 ~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  120 (258)
T cd05078          73 ESIMVQEYVK--FGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKG  120 (258)
T ss_pred             CcEEEEecCC--CCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8899999998  3577777765431  1    246788889999888654

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=93.93  E-value=0.51  Score=38.26  Aligned_cols=106  Identities=16%  Similarity=0.154  Sum_probs=64.8

Q ss_pred             eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      -++.+|.|...-||++...+ | .++||+-....      ..-...+...|.+.+..... .|. +++++  +.+.....
T Consensus        19 ~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~------~~~~~~~~~~e~~~~~~~~~-~~~-i~~~~~~~~~~~~~~   90 (296)
T cd06618          19 NLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTG------NKEENKRILMDLDVVLKSHD-CPY-IVKCYGYFITDSDVF   90 (296)
T ss_pred             eeeEeeccCCeEEEEEEECCCCeEEEEEEEeccC------ChHHHHHHHHHHHHHHhccC-CCc-hHhhheeeecCCeEE
Confidence            57789999999999999874 5 78888754211      11223344555555544432 233 33333  33667788


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHh
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLF  150 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~  150 (165)
                      ++||+++.....++.... +...    -.++.+|...|+-+|.
T Consensus        91 ~v~e~~~~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~  132 (296)
T cd06618          91 ICMELMSTCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKE  132 (296)
T ss_pred             EEeeccCcCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence            999999743334443322 2221    2578888999999995

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=93.86  E-value=0.96  Score=35.74  Aligned_cols=106  Identities=14%  Similarity=0.016  Sum_probs=66.6

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~  112 (165)
                      -.+.+|.|....||++.+. ++ .+++|.-.....       -.......|..+++.+..  |..++-. .+.+.+...+
T Consensus        13 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-------~~~~~~~~e~~~~~~l~h--~~ii~~~~~~~~~~~~~l   83 (267)
T cd06645          13 LIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG-------EDFAVVQQEIIMMKDCKH--SNIVAYFGSYLRRDKLWI   83 (267)
T ss_pred             HHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch-------hHHHHHHHHHHHHHhCCC--CCeeeEEEEEEeCCEEEE
Confidence            3456788888899999875 35 788887542211       122345567777776632  3332222 2346677889


Q ss_pred             EEecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~t  152 (165)
                      +||+++  ..+|.+.+..... .    -.++.++...|.-+|...
T Consensus        84 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  126 (267)
T cd06645          84 CMEFCG--GGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKG  126 (267)
T ss_pred             EEeccC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999998  4577776654332 2    246677788888888653

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=93.81  E-value=1.2  Score=35.83  Aligned_cols=107  Identities=19%  Similarity=0.162  Sum_probs=65.8

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCC----
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRT----  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e----  108 (165)
                      -++.+|.|....||++... ++ .++||.-......  .   ....+...|.++|+.+..  |..++-. +..+..    
T Consensus        12 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~---~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~~   84 (311)
T cd07866          12 ILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEK--D---GFPITALREIKILKKLKH--PNVVPLIDMAVERPDKSK   84 (311)
T ss_pred             EEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCC--C---CcchhHHHHHHHHHhcCC--CCccchhhheeccccccc
Confidence            4567999999999999875 44 7899986544321  1   112345668888887743  4333321 122222    


Q ss_pred             ----CceEEEecCCCCchHHHHHHHcC-CCC-----HHHHHHHHHHHHHHHhcc
Q 045250          109 ----MSLIGMRYLEPPHIILRKGLIAG-IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ----~~~~vMEdl~~~~~~lr~~l~~g-~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                          ...++|||.+.   .+...+... ..+     ..++.+|...|+-+|...
T Consensus        85 ~~~~~~~lv~~~~~~---~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~  135 (311)
T cd07866          85 RKRGSVYMVTPYMDH---DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENH  135 (311)
T ss_pred             ccCceEEEEEecCCc---CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence                34899999972   355555432 222     246778888888898754

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=93.79  E-value=1.5  Score=35.09  Aligned_cols=106  Identities=18%  Similarity=0.069  Sum_probs=66.6

Q ss_pred             eeEeccCCceeEEEEEEe-----CCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC
Q 045250           36 TIKEVGDGNLNFVYIVVG-----TSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DR  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~-----~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~  107 (165)
                      .++.+|.|...-||++..     .++ .+++|.-.....      .....+...|.++|+.+..  | .+++++.+  +.
T Consensus         8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~-~i~~~~~~~~~~   78 (283)
T cd05080           8 KIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG------QQNTSGWKKEINILKTLYH--E-NIVKYKGCCSEQ   78 (283)
T ss_pred             eceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC------hHHHHHHHHHHHHHHhCCC--C-CEeeEEEEEecC
Confidence            467789898888987642     234 688887543211      1223455668788877642  3 44555543  22


Q ss_pred             --CCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250          108 --TMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 --e~~~~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                        ....++||+++  ...|.+.+..+....    .++.++...|..+|...
T Consensus        79 ~~~~~~lv~e~~~--~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~  127 (283)
T cd05080          79 GGKGLQLIMEYVP--LGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQH  127 (283)
T ss_pred             CCceEEEEecCCC--CCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              23569999997  457777776655432    46777888888888654

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=93.77  E-value=0.48  Score=36.94  Aligned_cols=103  Identities=18%  Similarity=0.129  Sum_probs=62.1

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCC-CChHHHHHHHHHHHHhhccCCCCCceEEE--EcCC--C
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWP-MTKERAYFEALALKEHGKLCPDHVPEVYH--FDRT--M  109 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~-l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e--~  109 (165)
                      ...+|.|...-||++.+. +| .+++|.-..      ..+. -..++...|...|+.+..   ..+++++.  .+..  .
T Consensus         5 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~------~~~~~~~~~~~~~e~~~l~~l~~---~~i~~~~~~~~~~~~~~   75 (265)
T cd08217           5 LETIGKGSFGTVRKVRRKSDGKILVWKEIDY------GNMTEKEKQQLVSEVNILRELKH---PNIVRYYDRIIDRSNQT   75 (265)
T ss_pred             eeeeccCCCeEEEEeeecCCCCEEEEEEEec------ccCCHHHHHHHHHHHHHHHhcCC---CccceeeeeeecCCCCE
Confidence            356888988899999876 44 688885321      1111 112345556666665543   34555544  3322  3


Q ss_pred             ceEEEecCCCCchHHHHHHHc----CCC-C----HHHHHHHHHHHHHHHh
Q 045250          110 SLIGMRYLEPPHIILRKGLIA----GIK-Y----PLLAEHMSEFMAKTLF  150 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~----g~~-~----~~~a~~iG~~La~~h~  150 (165)
                      ..++|||++  ..+|.+.+..    +.. .    -.++.+|...|+.+|.
T Consensus        76 ~~~~~e~~~--~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~  123 (265)
T cd08217          76 LYIVMEYCE--GGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHN  123 (265)
T ss_pred             EEEEehhcc--CCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhc
Confidence            468999998  3366655543    222 1    2477889999999993

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=93.72  E-value=1.1  Score=37.36  Aligned_cols=104  Identities=15%  Similarity=0.175  Sum_probs=65.8

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--------
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--------  105 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--------  105 (165)
                      .+++||.|....||++.+. +| .+++|.-...-    .   -..+....|.++|+.+..  |. +.+++.+        
T Consensus         9 ~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~----~---~~~~~~~~Ei~~l~~l~h--~~-i~~~~~~~~~~~~~~   78 (342)
T cd07854           9 DLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTD----P---QSVKHALREIKIIRRLDH--DN-IVKVYEVLGPSGSDL   78 (342)
T ss_pred             EEEEecCCCCEEEEEEEECCCCcEEEEEEEecCC----C---chHHHHHHHHHHHHhcCC--Cc-chhhHhhhccccccc
Confidence            5788999999999999875 45 78888642111    1   122445567888877643  32 2322211        


Q ss_pred             --------cCCCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250          106 --------DRTMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 --------D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                              +.....+|||+++ .  .+++.+..+....    .++.+|...|.-+|...
T Consensus        79 ~~~~~~~~~~~~~~lv~e~~~-~--~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~g  134 (342)
T cd07854          79 TEDVGSLTELNSVYIVQEYME-T--DLANVLEQGPLSEEHARLFMYQLLRGLKYIHSAN  134 (342)
T ss_pred             ccccccccccceEEEEeeccc-c--cHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence                    1124569999997 2  6777776665432    45678888888888654

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=93.65  E-value=1.1  Score=35.91  Aligned_cols=104  Identities=14%  Similarity=0.097  Sum_probs=65.3

Q ss_pred             eEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~  112 (165)
                      +.++|.|...-||++.+.. + .+++|.-....       .-...+...|.+.|+.+..  |. +++++  +.+.....+
T Consensus        10 ~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~e~~~l~~l~h--~~-ii~~~~~~~~~~~~~~   79 (282)
T cd06643          10 IGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS-------EEELEDYMVEIDILASCDH--PN-IVKLLDAFYYENNLWI   79 (282)
T ss_pred             HhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC-------HHHHHHHHHHHHHHHHCCC--CC-eeeEEEEEeeCCEEEE
Confidence            3558888889999998864 4 45555542111       0123455667777776642  33 33343  556778889


Q ss_pred             EEecCCCCchHHHHHHHc--CCCC----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIA--GIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~--g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||||++ + ..+...+.+  +...    ..++.+|...|+-+|...
T Consensus        80 v~e~~~-~-~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~  123 (282)
T cd06643          80 LIEFCA-G-GAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENK  123 (282)
T ss_pred             EEEecC-C-CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999998 3 366665543  2222    347778888899898754

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=93.64  E-value=0.74  Score=36.32  Aligned_cols=107  Identities=13%  Similarity=0.111  Sum_probs=64.8

Q ss_pred             EeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCc-eEEEEcCCCceEEE
Q 045250           38 KEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVP-EVYHFDRTMSLIGM  114 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP-~v~~~D~e~~~~vM  114 (165)
                      +.+|.|...-||++... +| .++||.-...-.. .   .-...+...|...|+.+..  |..++ .-++.+.....++|
T Consensus         8 ~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~-~---~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           8 KKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLM-D---AKARADCIKEIDLLKQLNH--PNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             hhhcccCCeEEEEEeecCCCceEEEEeeeehhhh-h---HHHHHHHHHHHHHHHHccC--CchhhhhheeEeCCeEEEEE
Confidence            56888888899999864 45 8889954321110 0   0112355567777776642  32222 12344667788999


Q ss_pred             ecCCCCchHHHHHHHc----CCCCH-----HHHHHHHHHHHHHHhcc
Q 045250          115 RYLEPPHIILRKGLIA----GIKYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 Edl~~~~~~lr~~l~~----g~~~~-----~~a~~iG~~La~~h~~t  152 (165)
                      |+++  ...|++.+..    +...+     .++.+|...|+-+|...
T Consensus        82 e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~  126 (267)
T cd08229          82 ELAD--AGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR  126 (267)
T ss_pred             EecC--CCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9998  3466665542    22221     45778899999999654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=93.64  E-value=0.99  Score=35.77  Aligned_cols=111  Identities=15%  Similarity=0.105  Sum_probs=66.4

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCcccccc-C--CCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCC
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCI-G--ESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTM  109 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~-~--~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~  109 (165)
                      .+.+|.|...-||++... +| .++||+-..-.... .  ..+.--.+....|...|+.+..  | .+++++.+  +.+.
T Consensus         6 ~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~~   82 (272)
T cd06629           6 GELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDH--L-NIVQYLGFETTEEY   82 (272)
T ss_pred             cceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCC--C-CcceEEEEeccCCc
Confidence            457899999999999764 45 78888653221110 0  0011112344557777766642  3 34444433  4466


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      ..+|||+++  ...|.+.+.+...+ .    .++.+|...|.-+|...
T Consensus        83 ~~lv~e~~~--~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~  128 (272)
T cd06629          83 LSIFLEYVP--GGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKG  128 (272)
T ss_pred             eEEEEecCC--CCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            789999998  34676666553322 2    35677888888888654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=93.58  E-value=1  Score=42.00  Aligned_cols=108  Identities=13%  Similarity=-0.035  Sum_probs=68.3

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      -++.||.|....||++.+. .+ .++||.-...-..    -.-...+...|...|+.+..  |.. +.++  +.+.....
T Consensus         8 i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~----~~~~~~~~~~E~~~l~~l~h--p~I-v~~~~~~~~~~~~~   80 (669)
T cd05610           8 IVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMI----NKNMVHQVQAERDALALSKS--PFI-VHLYYSLQSANNVY   80 (669)
T ss_pred             EEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhcc----CHHHHHHHHHHHHHHHhcCC--CCc-CeEEEEEEECCEEE
Confidence            4678999999999999987 34 7889974321100    01112456667777765532  333 3333  23456788


Q ss_pred             EEEecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~t  152 (165)
                      +||||+.  +..|++.+..... .    -.++.+|...|.-+|...
T Consensus        81 lVmEy~~--g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~g  124 (669)
T cd05610          81 LVMEYLI--GGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHG  124 (669)
T ss_pred             EEEeCCC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999997  3567776654322 1    256778888888888763

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=93.58  E-value=2.3  Score=33.61  Aligned_cols=106  Identities=15%  Similarity=-0.001  Sum_probs=66.1

Q ss_pred             eeEeccCCceeEEEEEEeCC----C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCC
Q 045250           36 TIKEVGDGNLNFVYIVVGTS----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRT  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e  108 (165)
                      -.+.+|.|....||++....    . .++||...+...      .....+...|..+|+.+..  | .+.+++.  .+.+
T Consensus         8 ~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~------~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~   78 (266)
T cd05033           8 IEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSS------DKQRLDFLTEASIMGQFDH--P-NIIRLEGVVTKSR   78 (266)
T ss_pred             eeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCC------hHHHHHHHHHHHHHHhCCC--C-CcceEeEEEecCC
Confidence            35778999999999998642    2 688887543211      1122344557777766642  3 3444443  3556


Q ss_pred             CceEEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 045250          109 MSLIGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ...++||+++  ..+|.+.+...  ...    -.++.++...|+.+|...
T Consensus        79 ~~~iv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~  126 (266)
T cd05033          79 PVMIITEYME--NGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMN  126 (266)
T ss_pred             ceEEEEEcCC--CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            6789999998  34777766542  222    245677788888888743

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=93.57  E-value=0.66  Score=38.82  Aligned_cols=85  Identities=13%  Similarity=0.028  Sum_probs=52.3

Q ss_pred             eeEeccCCceeEEEEEEe------CCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-E-c
Q 045250           36 TIKEVGDGNLNFVYIVVG------TSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH-F-D  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~------~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~-D  106 (165)
                      -.+.||.|....||++..      .++ .+.||+-......      -...+...|.+.|+.+... |. +++++. + +
T Consensus        11 ~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~E~~~l~~l~~h-~n-iv~~~~~~~~   82 (343)
T cd05103          11 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH------SEHRALMSELKILIHIGHH-LN-VVNLLGACTK   82 (343)
T ss_pred             ccccccCCccceEEEEeeccCCccccceeEEEEEeccCCCh------HHHHHHHHHHHHHHhccCC-cc-Hhhhcceeec
Confidence            467799999999999963      234 6888976422110      1124566788888777542 33 333332 2 2


Q ss_pred             C-CCceEEEecCCCCchHHHHHHHc
Q 045250          107 R-TMSLIGMRYLEPPHIILRKGLIA  130 (165)
Q Consensus       107 ~-e~~~~vMEdl~~~~~~lr~~l~~  130 (165)
                      + ....++|||++  ..+|.+.+..
T Consensus        83 ~~~~~~lv~ey~~--~g~L~~~i~~  105 (343)
T cd05103          83 PGGPLMVIVEFCK--FGNLSNYLRS  105 (343)
T ss_pred             CCCceEEEEeccC--CCcHHHHHHh
Confidence            3 34578999998  3466666543

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=93.54  E-value=1  Score=35.91  Aligned_cols=106  Identities=15%  Similarity=0.055  Sum_probs=66.0

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCc-eEEEEcCCCceEE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVP-EVYHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP-~v~~~D~e~~~~v  113 (165)
                      ++.+|.|...-||++.+. +| .+++|.-.....  ..   ....+...|.+.|+.+..  |..++ .-++.|.....++
T Consensus         5 ~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~--~~---~~~~~~~~ei~~l~~l~h--~~i~~~~~~~~~~~~~~lv   77 (284)
T cd07839           5 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD--DE---GVPSSALREICLLKELKH--KNIVRLYDVLHSDKKLTLV   77 (284)
T ss_pred             EEEecccCCeEEEEEEECCCCcEEEEEEeecccc--cc---cCccchhHHHHHHHhcCC--CCeeeHHHHhccCCceEEE
Confidence            467899999999999885 45 788886543211  11   112344568888877743  32221 1123466778899


Q ss_pred             EecCCCCchHHHHHHHc--CCCC----HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIA--GIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~--g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++ .  .+.+.+..  +...    ..++.+|...|+-+|...
T Consensus        78 ~e~~~-~--~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~  119 (284)
T cd07839          78 FEYCD-Q--DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHN  119 (284)
T ss_pred             EecCC-C--CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99998 2  45555543  2322    356778888888888654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=93.53  E-value=0.58  Score=36.39  Aligned_cols=104  Identities=14%  Similarity=0.014  Sum_probs=65.6

Q ss_pred             ccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEEEec
Q 045250           40 VGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIGMRY  116 (165)
Q Consensus        40 l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~vMEd  116 (165)
                      +|.|...-||++...+ + .+++|.-....-.    -....++...|..+|+.+.  .|..++-. .+-+.....++||+
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~----~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~~v~e~   74 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKII----KRKEVEHTLTERNILSRIN--HPFIVKLHYAFQTEEKLYLVLEY   74 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhc----chHHHHHHHHHHHHHHHcC--CCcHHHHHHHeecCCeeEEEEec
Confidence            4677777899998763 4 7888864322110    0124567888888888776  24333322 12355667999999


Q ss_pred             CCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhc
Q 045250          117 LEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       117 l~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~  151 (165)
                      ++  ..+|.+.+..... .    ..++.++...|.-+|..
T Consensus        75 ~~--~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~  112 (250)
T cd05123          75 AP--GGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSL  112 (250)
T ss_pred             CC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            97  3477777766532 2    24566778888888763

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=93.53  E-value=1.5  Score=34.12  Aligned_cols=102  Identities=17%  Similarity=0.087  Sum_probs=67.1

Q ss_pred             eEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250           37 IKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v  113 (165)
                      .+.++.|..--||++...+ + .+++|.-....         ..++...|.+.++.+..  |..++-. ++.+.....++
T Consensus         8 ~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~---------~~~~~~~e~~~~~~l~~--~~i~~~~~~~~~~~~~~l~   76 (256)
T cd06612           8 LEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE---------DLQEIIKEISILKQCDS--PYIVKYYGSYFKNTDLWIV   76 (256)
T ss_pred             hhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH---------HHHHHHHHHHHHHhCCC--CcEeeeeeeeecCCcEEEE
Confidence            4457888888899998864 4 78888643211         15677788888887722  3333222 34566778899


Q ss_pred             EecCCCCchHHHHHHHc-CCCC-----HHHHHHHHHHHHHHHhc
Q 045250          114 MRYLEPPHIILRKGLIA-GIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~-g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      ||+++  ...|++.+.. +...     -.++.++...|+-+|..
T Consensus        77 ~e~~~--~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~  118 (256)
T cd06612          77 MEYCG--AGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN  118 (256)
T ss_pred             EecCC--CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99998  4577777653 3222     25777888888888854

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=93.51  E-value=2.1  Score=34.52  Aligned_cols=105  Identities=15%  Similarity=0.085  Sum_probs=65.9

Q ss_pred             eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      -++.+|.|...-||++.+.. + .+++|.-...-.       -...+...|...++.+..  | .+++++  +.+.....
T Consensus        16 i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~-------~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~~~~   85 (292)
T cd06644          16 IIGELGDGAFGKVYKAKNKETGALAAAKVIETKSE-------EELEDYMVEIEILATCNH--P-YIVKLLGAFYWDGKLW   85 (292)
T ss_pred             hhheecCCCCeEEEEEEECCCCceEEEEEeccCCH-------HHHHHHHHHHHHHHhCCC--C-cEeeeEEEEEeCCeEE
Confidence            36679999999999998864 5 677777542211       113455567777766542  3 344444  34667789


Q ss_pred             EEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  ...+...+.+.  ...    -.++.+|...|+-+|...
T Consensus        86 lv~e~~~--~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~  130 (292)
T cd06644          86 IMIEFCP--GGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMK  130 (292)
T ss_pred             EEEecCC--CCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            9999998  33555544432  222    246777788888888643

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=93.50  E-value=1.2  Score=36.50  Aligned_cols=107  Identities=15%  Similarity=-0.002  Sum_probs=69.5

Q ss_pred             eeEeccCCceeEEEEEEeC--------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--
Q 045250           36 TIKEVGDGNLNFVYIVVGT--------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--  104 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~--------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--  104 (165)
                      -...+|.|....||++...        .+ .+.+|.......      .-...+...|.+.|+.+... | .+.+++.  
T Consensus        16 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-~-~iv~~~~~~   87 (314)
T cd05099          16 LGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT------DKDLADLISEMELMKLIGKH-K-NIINLLGVC   87 (314)
T ss_pred             eeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCC------hHHHHHHHHHHHHHHhccCC-C-CeeeEEEEE
Confidence            5678999999999999742        12 577887553221      11234666787777766443 4 3444543  


Q ss_pred             EcCCCceEEEecCCCCchHHHHHHHcCC----------------CC-----HHHHHHHHHHHHHHHhcc
Q 045250          105 FDRTMSLIGMRYLEPPHIILRKGLIAGI----------------KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       105 ~D~e~~~~vMEdl~~~~~~lr~~l~~g~----------------~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      .+.....++|||++  ...|.+.+....                ..     -.++.+|...|..+|...
T Consensus        88 ~~~~~~~lv~e~~~--~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g  154 (314)
T cd05099          88 TQEGPLYVIVEYAA--KGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR  154 (314)
T ss_pred             ccCCceEEEEecCC--CCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence            35566789999998  347777775532                11     136778999999999754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=93.50  E-value=1.3  Score=35.67  Aligned_cols=110  Identities=12%  Similarity=-0.084  Sum_probs=60.2

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH-FDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~e~~~~  112 (165)
                      .++.+|.|....||++... +| .+.+|.+.-..... . -.-...+...|...++...  -|. +.+++. +......+
T Consensus        11 ~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~-~-~~~~~~~~~~~~~~l~~l~--h~~-iv~~~~~~~~~~~~~   85 (279)
T cd05111          11 KLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR-S-GRQTFQEITDHMLAMGSLD--HAY-IVRLLGICPGASLQL   85 (279)
T ss_pred             eccccCccCCcceEEEEEcCCCCceeeEEEEeecccc-c-chHHHHHHHHHHHHHhcCC--CCC-cceEEEEECCCccEE
Confidence            4567999999999999864 33 33333332222210 0 0011122222333333221  243 444443 34455678


Q ss_pred             EEecCCCCchHHHHHHHcC-C-CC----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAG-I-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g-~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +||+++  ..+|.+.+... . ..    -.++.+|...|+-+|...
T Consensus        86 i~e~~~--~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  129 (279)
T cd05111          86 VTQLSP--LGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHR  129 (279)
T ss_pred             EEEeCC--CCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999998  34777777542 2 22    257889999999999754

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=93.50  E-value=1.2  Score=36.95  Aligned_cols=108  Identities=14%  Similarity=0.011  Sum_probs=63.1

Q ss_pred             eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      -++.||.|....||++.... + .+.+|.-...-.. .   .........|...|+....  | .++.++  +.+.+...
T Consensus         5 ~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-~---~~~~~~~~~e~~~l~~~~~--~-~i~~~~~~~~~~~~~~   77 (332)
T cd05623           5 ILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEML-K---RAETACFREERDVLVNGDN--Q-WITTLHYAFQDENNLY   77 (332)
T ss_pred             EEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHH-H---hhHHHHHHHHHHHHhhCCC--C-CEeeEEEEEecCCEEE
Confidence            36789999999999998764 3 6777864321110 0   0112233445555544322  3 333333  33556678


Q ss_pred             EEEecCCCCchHHHHHHHcC-CCC-H----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAG-IKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g-~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  ...|.+.+.+. ..+ .    .++.+|...|.-+|...
T Consensus        78 lv~ey~~--~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~  122 (332)
T cd05623          78 LVMDYYV--GGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLH  122 (332)
T ss_pred             EEEeccC--CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  34777777652 222 2    35567777788777643

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=93.47  E-value=0.64  Score=41.93  Aligned_cols=102  Identities=21%  Similarity=0.152  Sum_probs=71.8

Q ss_pred             eEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC--CceEE
Q 045250           37 IKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRT--MSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e--~~~~v  113 (165)
                      +++||.|+.--||....... +|-+|.-.+-        .++.+-...|+.+|+.+.-   ..+-++|..=..  .--||
T Consensus       211 ~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~--------~m~~~~f~~Ea~iMk~L~H---~~lV~l~gV~~~~~piyIV  279 (468)
T KOG0197|consen  211 IRELGSGQFGEVWLGKWNGSTKVAVKTIKEG--------SMSPEAFLREAQIMKKLRH---EKLVKLYGVCTKQEPIYIV  279 (468)
T ss_pred             HHHhcCCccceEEEEEEcCCCcccceEEecc--------ccChhHHHHHHHHHHhCcc---cCeEEEEEEEecCCceEEE
Confidence            56799999999999988755 6777765543        3555666689999987755   223444444333  35899


Q ss_pred             EecCCCCchHHHHHHHc--CCC-----CHHHHHHHHHHHHHHHhc
Q 045250          114 MRYLEPPHIILRKGLIA--GIK-----YPLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~--g~~-----~~~~a~~iG~~La~~h~~  151 (165)
                      |||++  ...|++.|..  |..     .-.+|.||+.-|+-+...
T Consensus       280 tE~m~--~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~  322 (468)
T KOG0197|consen  280 TEYMP--KGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK  322 (468)
T ss_pred             EEecc--cCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC
Confidence            99999  4589999987  332     237899998888776554

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=93.39  E-value=1.3  Score=38.59  Aligned_cols=103  Identities=18%  Similarity=-0.000  Sum_probs=72.7

Q ss_pred             ccCCceeEEEEEEeCCCe-EEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC---CceEEEe
Q 045250           40 VGDGNLNFVYIVVGTSGS-FVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRT---MSLIGMR  115 (165)
Q Consensus        40 l~~Gn~N~v~rV~~~~gs-vIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e---~~~~vME  115 (165)
                      +|.|..-.||+..-.... +.||...+--... ..    ..+.+.|+.+|+.++-  |..|. ++..=.+   ...+|||
T Consensus        49 iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~-~~----~~~f~~E~~il~~l~H--pNIV~-f~G~~~~~~~~~~iVtE  120 (362)
T KOG0192|consen   49 LGSGSFGTVYKGKWRGTDVVAVKIISDPDFDD-ES----RKAFRREASLLSRLRH--PNIVQ-FYGACTSPPGSLCIVTE  120 (362)
T ss_pred             cccCCceeEEEEEeCCceeEEEEEecchhcCh-HH----HHHHHHHHHHHHhCCC--CCeee-EEEEEcCCCCceEEEEE
Confidence            888999999999877545 8888877665531 22    7788889988887443  44443 5555444   3689999


Q ss_pred             cCCCCchHHHHHHHc---CCCCH----HHHHHHHHHHHHHHhcc
Q 045250          116 YLEPPHIILRKGLIA---GIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       116 dl~~~~~~lr~~l~~---g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      |++  ...|++.|..   +...+    .+|.+|++-|--+|...
T Consensus       121 y~~--~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~  162 (362)
T KOG0192|consen  121 YMP--GGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEG  162 (362)
T ss_pred             eCC--CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            999  3588888866   33333    57888888777777765

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=93.32  E-value=1.5  Score=34.76  Aligned_cols=106  Identities=20%  Similarity=0.151  Sum_probs=65.9

Q ss_pred             eeEeccCCceeEEEEEEeCC------C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--Ec
Q 045250           36 TIKEVGDGNLNFVYIVVGTS------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FD  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D  106 (165)
                      -...+|.|....||++...+      + .+++|.-.....      .........|...|+.+..  | .+.+++.  .+
T Consensus        10 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~------~~~~~~~~~e~~~l~~~~~--~-~i~~~~~~~~~   80 (277)
T cd05032          10 LIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENAS------MRERIEFLNEASVMKEFNC--H-HVVRLLGVVST   80 (277)
T ss_pred             EEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccC------HHHHHHHHHHHHHHHhCCC--C-ceeEEEEEEcC
Confidence            45778999999999988642      2 688888432111      1112344556666665532  3 3444543  46


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCC-----------C----HHHHHHHHHHHHHHHhcc
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLIAGIK-----------Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~~g~~-----------~----~~~a~~iG~~La~~h~~t  152 (165)
                      .....++||+++  ..+|.+.+.+...           .    -.++.+|...|.-+|...
T Consensus        81 ~~~~~~v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  139 (277)
T cd05032          81 GQPTLVVMELMA--KGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK  139 (277)
T ss_pred             CCCcEEEEecCC--CCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            677899999997  3477776654211           1    236778888888888643

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=93.21  E-value=0.71  Score=36.97  Aligned_cols=103  Identities=18%  Similarity=0.191  Sum_probs=65.6

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~  112 (165)
                      ++.+|.|....||++.+. .| .+++|.-.....      .....+...|.++|+.+..  |. +++++  +.+.....+
T Consensus         6 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~e~~~l~~~~~--~~-i~~~~~~~~~~~~~~l   76 (286)
T cd06622           6 LDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELD------ESKFNQIIMELDILHKAVS--PY-IVDFYGAFFIEGAVYM   76 (286)
T ss_pred             hhhhcccCCeEEEEEEEcCCCcEEEEEEeecccC------HHHHHHHHHHHHHHHhcCC--Cc-HHhhhhheecCCeEEE
Confidence            456889999999999886 45 788886532111      0112456668888876642  22 22222  345677789


Q ss_pred             EEecCCCCchHHHHHHHcC----CCC----HHHHHHHHHHHHHHHh
Q 045250          113 GMRYLEPPHIILRKGLIAG----IKY----PLLAEHMSEFMAKTLF  150 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g----~~~----~~~a~~iG~~La~~h~  150 (165)
                      |||+++  +..|.+.+..+    ...    -.++.+|...|..+|.
T Consensus        77 v~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~  120 (286)
T cd06622          77 CMEYMD--AGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE  120 (286)
T ss_pred             EEeecC--CCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            999998  34676666554    221    3567778888888884

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=93.16  E-value=1.3  Score=35.25  Aligned_cols=106  Identities=20%  Similarity=0.172  Sum_probs=63.8

Q ss_pred             eeEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c
Q 045250           36 TIKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--D  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D  106 (165)
                      -...+|.|....||++...      .+ .+.||.-..-     ..+ -...+...|..+|+.+.  .|. +++++.+  +
T Consensus        10 ~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~-----~~~-~~~~~~~~e~~~l~~l~--~~~-iv~~~~~~~~   80 (277)
T cd05062          10 MSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEA-----ASM-RERIEFLNEASVMKEFN--CHH-VVRLLGVVSQ   80 (277)
T ss_pred             eeeeeccccCCeEEEEEeccCCCCCceeEEEEEecccc-----CCH-HHHHHHHHHHHHHHhCC--CCC-eeeEEEEEcC
Confidence            3567899999999987643      23 5888853211     111 11223455666666553  243 4445543  4


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCC---------------CHHHHHHHHHHHHHHHhcc
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLIAGIK---------------YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~~g~~---------------~~~~a~~iG~~La~~h~~t  152 (165)
                      .....+||||++  ..+|.+.+.+...               .-.++.++...|+.+|...
T Consensus        81 ~~~~~lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~  139 (277)
T cd05062          81 GQPTLVIMELMT--RGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK  139 (277)
T ss_pred             CCCeEEEEecCC--CCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            456789999998  3467666654211               1246778899999999754

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=93.13  E-value=0.91  Score=36.45  Aligned_cols=105  Identities=16%  Similarity=0.101  Sum_probs=65.4

Q ss_pred             eeEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEc
Q 045250           36 TIKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFD  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D  106 (165)
                      -..++|.|....||++...      ++ .+.+|+-.....       ........|.+.|+.+..  | ++.+++  ..+
T Consensus         9 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~-------~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~   78 (280)
T cd05092           9 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE-------SARQDFQREAELLTVLQH--Q-HIVRFYGVCTE   78 (280)
T ss_pred             eccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCH-------HHHHHHHHHHHHHhcCCC--C-CCceEEEEEec
Confidence            4677888999999999632      23 566776332111       123456667777776643  3 333444  345


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCC----------------CC----HHHHHHHHHHHHHHHhcc
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLIAGI----------------KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~~g~----------------~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .....++||+++  ...|.+.+....                ..    -.++.+|...|+-+|...
T Consensus        79 ~~~~~lv~e~~~--~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~  142 (280)
T cd05092          79 GRPLLMVFEYMR--HGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH  142 (280)
T ss_pred             CCceEEEEecCC--CCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence            577889999998  347777665432                11    246678888888888654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=93.07  E-value=0.76  Score=39.23  Aligned_cols=84  Identities=15%  Similarity=0.017  Sum_probs=52.5

Q ss_pred             eeEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--Ec
Q 045250           36 TIKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FD  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D  106 (165)
                      -.+.+|.|....||++...      ++ .+.||.......      .-..++...|.++|+.+... |. +++++.  .+
T Consensus        42 ~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~il~~l~~h-~n-Iv~~~~~~~~  113 (374)
T cd05106          42 FGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH------TDEREALMSELKILSHLGQH-KN-IVNLLGACTH  113 (374)
T ss_pred             ehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC------HHHHHHHHHHHHHHHhhccC-Cc-eeeEeeEecC
Confidence            4678999999999998742      22 577777653221      11235667788888776432 33 344443  34


Q ss_pred             CCCceEEEecCCCCchHHHHHHH
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLI  129 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~  129 (165)
                      .....+||||++ . .+|.+.+.
T Consensus       114 ~~~~~lv~ey~~-~-g~L~~~l~  134 (374)
T cd05106         114 GGPVLVITEYCC-Y-GDLLNFLR  134 (374)
T ss_pred             CCCeEEeHhhcc-C-CcHHHHHH
Confidence            566789999998 3 35655553

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=93.06  E-value=0.44  Score=43.75  Aligned_cols=125  Identities=16%  Similarity=0.122  Sum_probs=84.3

Q ss_pred             cceeEeccCCceeEEEEEEeCCC-eEEEEecCcccccc------------------CCCCC----CC--hHHHHHHHHHH
Q 045250           34 DLTIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCI------------------GESWP----MT--KERAYFEALAL   88 (165)
Q Consensus        34 ~~~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~------------------~~~~~----l~--~~R~~~E~~~L   88 (165)
                      ..+=+||+--.+--|+|..+.+| .|+||-=.|-++..                  .|++.    .+  .++...|-.++
T Consensus       163 ~f~~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~  242 (538)
T KOG1235|consen  163 EFDEEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFT  242 (538)
T ss_pred             hcCcchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchH
Confidence            44556777777788999999989 89999999987631                  12211    11  11222222222


Q ss_pred             HHh----------hccC---CCCCceEEEEcCCCceEEEecCCC-CchHHHHHHHcCCCCH-HHHHHHHHHHHHHHhccc
Q 045250           89 KEH----------GKLC---PDHVPEVYHFDRTMSLIGMRYLEP-PHIILRKGLIAGIKYP-LLAEHMSEFMAKTLFYTS  153 (165)
Q Consensus        89 ~~~----------~~~~---p~~vP~v~~~D~e~~~~vMEdl~~-~~~~lr~~l~~g~~~~-~~a~~iG~~La~~h~~ts  153 (165)
                      +.+          ....   +.+||+||-.--...+++|||+.+ .-.++ +.|.+..+.+ +++..++++.+..-|.+.
T Consensus       243 ~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl-~~i~~~gi~~~~i~~~l~~~~~~qIf~~G  321 (538)
T KOG1235|consen  243 KEAKNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDL-DAIDKRGISPHDILNKLVEAYLEQIFKTG  321 (538)
T ss_pred             HHHHhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCH-HHHHHcCCCHHHHHHHHHHHHHHHHHhcC
Confidence            222          2222   456999998888889999999985 11223 5555555554 899999999999999998


Q ss_pred             ccccCc
Q 045250          154 LLYRTT  159 (165)
Q Consensus       154 d~~l~~  159 (165)
                      -|+-|+
T Consensus       322 ffHaDP  327 (538)
T KOG1235|consen  322 FFHADP  327 (538)
T ss_pred             CccCCC
Confidence            887765

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=93.00  E-value=0.5  Score=45.18  Aligned_cols=99  Identities=12%  Similarity=0.044  Sum_probs=64.6

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~  112 (165)
                      ...+|.|....||++... +| .++||.-...-.           ....|.+.|+.+   --..+.+++.+  +.+...+
T Consensus       695 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~l~~l---~HpnIv~~~~~~~~~~~~~l  760 (968)
T PLN00113        695 ENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-----------IPSSEIADMGKL---QHPNIVKLIGLCRSEKGAYL  760 (968)
T ss_pred             ccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-----------ccHHHHHHHhhC---CCCCcceEEEEEEcCCCCEE
Confidence            346899999999999874 55 899996432111           112345555544   23345556654  5667789


Q ss_pred             EEecCCCCchHHHHHHHcCC--CCHHHHHHHHHHHHHHHhc
Q 045250          113 GMRYLEPPHIILRKGLIAGI--KYPLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~--~~~~~a~~iG~~La~~h~~  151 (165)
                      ||||++  ...|.+.+..-.  ..-.++.+|+..|+-+|..
T Consensus       761 v~Ey~~--~g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~  799 (968)
T PLN00113        761 IHEYIE--GKNLSEVLRNLSWERRRKIAIGIAKALRFLHCR  799 (968)
T ss_pred             EEeCCC--CCcHHHHHhcCCHHHHHHHHHHHHHHHHHhccC
Confidence            999998  457777664311  1236889999999999954

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=92.91  E-value=2.6  Score=34.24  Aligned_cols=101  Identities=17%  Similarity=0.068  Sum_probs=61.6

Q ss_pred             EeccCCceeEEEEEEeCC---C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE---cCCCc
Q 045250           38 KEVGDGNLNFVYIVVGTS---G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF---DRTMS  110 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~~---g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~---D~e~~  110 (165)
                      ..+|.|....||++...+   + .+++|+-..      ..+   ..+...|.++|+.+..  |..++-.-.+   +....
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~------~~~---~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~   75 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEG------TGI---SMSACREIALLRELKH--PNVIALQKVFLSHSDRKV   75 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecC------CCC---cHHHHHHHHHHHhCCC--CCeeeEEEEEeccCCCeE
Confidence            468999999999998642   3 688886532      111   1356678888887653  4333322222   33456


Q ss_pred             eEEEecCCCCchHHHHHHHcC----------CCC----HHHHHHHHHHHHHHHhcc
Q 045250          111 LIGMRYLEPPHIILRKGLIAG----------IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdl~~~~~~lr~~l~~g----------~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .++||+++.   .+.+.+...          ...    -.++.+|...|.-+|...
T Consensus        76 ~lv~e~~~~---~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~  128 (317)
T cd07867          76 WLLFDYAEH---DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW  128 (317)
T ss_pred             EEEEeeeCC---cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            799999983   333333211          111    256778889999999753

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=92.87  E-value=2.5  Score=34.01  Aligned_cols=106  Identities=16%  Similarity=0.093  Sum_probs=64.4

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEE--------
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHF--------  105 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~--------  105 (165)
                      ...+|.|....||++... +| .++||........     .-.......|.++++.+..  |..++-. ++.        
T Consensus        12 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~-----~~~~~~~~~e~~~~~~l~h--~~i~~~~~~~~~~~~~~~~   84 (302)
T cd07864          12 IGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEK-----EGFPITAIREIKILRQLNH--RNIVNLKEIVTDKQDALDF   84 (302)
T ss_pred             eeeecccCCEEEEEEEECCCCcEEEEEEEeecccc-----cCchHHHHHHHHHHHhCCC--CCeeeeeheecCcchhhhc
Confidence            466888999999999986 45 7888975433211     1122345567788877742  4333211 111        


Q ss_pred             --cCCCceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250          106 --DRTMSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 --D~e~~~~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                        +.....++||+++ .  .+...+....  ..    -.++.+|...|+.+|...
T Consensus        85 ~~~~~~~~lv~e~~~-~--~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  136 (302)
T cd07864          85 KKDKGAFYLVFEYMD-H--DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKN  136 (302)
T ss_pred             cccCCcEEEEEcccC-c--cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence              2236789999998 3  3444454432  11    257788889999998553

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=92.78  E-value=1.5  Score=39.03  Aligned_cols=103  Identities=17%  Similarity=0.086  Sum_probs=67.2

Q ss_pred             EeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEE
Q 045250           38 KEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLIG  113 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~v  113 (165)
                      ++||.|-.-.||+..-. ++ .|.||.-.-.    .. -+-.++=...|..+|+.+.   -.++-+++.+  +++...+|
T Consensus        16 ~~iG~GsfavVykg~h~~~~~~VAIK~i~~~----~l-~~k~~e~L~~Ei~iLkel~---H~nIV~l~d~~~~~~~i~lV   87 (429)
T KOG0595|consen   16 REIGSGSFAVVYKGRHKKSGTEVAIKCIAKK----KL-NKKLVELLLSEIKILKELK---HPNIVRLLDCIEDDDFIYLV   87 (429)
T ss_pred             hhccCcceEEEEEeEeccCCceEEeeeehhh----cc-CHHHHHHHHHHHHHHHhcC---CcceeeEEEEEecCCeEEEE
Confidence            34999999999999876 44 7777754322    00 0112233367777888876   3344455543  56788899


Q ss_pred             EecCCCCchHHHHHHHcC-CCCH----HHHHHHHHHHHHHHh
Q 045250          114 MRYLEPPHIILRKGLIAG-IKYP----LLAEHMSEFMAKTLF  150 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g-~~~~----~~a~~iG~~La~~h~  150 (165)
                      ||||.  +.+|-+.+.+. ...+    .+..||+..|.-+|.
T Consensus        88 MEyC~--gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~  127 (429)
T KOG0595|consen   88 MEYCN--GGDLSDYIRRRGRLPEATARHFMQQLASALQFLHE  127 (429)
T ss_pred             EEeCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            99998  45888888775 4444    455667777776664

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=92.76  E-value=3.5  Score=32.71  Aligned_cols=105  Identities=11%  Similarity=-0.012  Sum_probs=65.7

Q ss_pred             eEeccCCceeEEEEEEeC----CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCC
Q 045250           37 IKEVGDGNLNFVYIVVGT----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTM  109 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~  109 (165)
                      .+.+|.|....||++...    .+ .+.+|.-..-..      .-...+...|...|+.+.   -..+++++.+  +.+.
T Consensus        10 ~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~------~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~   80 (266)
T cd05064          10 ERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS------DKQRRGFLAEALTLGQFD---HSNIVRLEGVITRGNT   80 (266)
T ss_pred             eeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC------HHHHHHHHHHHHHHhcCC---CCCcCeEEEEEecCCC
Confidence            356899999999998753    22 577777653211      011234455666665542   2345555544  5567


Q ss_pred             ceEEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ..+||||++  ...|.+.+...  ...    -.++.+|...|+-+|...
T Consensus        81 ~~lv~e~~~--~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~  127 (266)
T cd05064          81 MMIVTEYMS--NGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMG  127 (266)
T ss_pred             cEEEEEeCC--CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            889999998  34777777653  222    256778888888898654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=92.75  E-value=1.5  Score=35.09  Aligned_cols=98  Identities=15%  Similarity=0.088  Sum_probs=61.5

Q ss_pred             eccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEEE
Q 045250           39 EVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLIGM  114 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~vM  114 (165)
                      .+|.|...-||.+... ++ .+++|.-.+..      +      ...|....+..... | .+++++.  .+.+...+||
T Consensus        23 ~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~------~------~~~e~~~~~~~~~h-~-~iv~~~~~~~~~~~~~iv~   88 (267)
T PHA03390         23 KLIDGKFGKVSVLKHKPTQKLFVQKIIKAKN------F------NAIEPMVHQLMKDN-P-NFIKLYYSVTTLKGHVLIM   88 (267)
T ss_pred             eecCCCceEEEEEEEcCCCcEEEEEEEehhh------c------chhhHHHHHHhhcC-C-CEEEEEEEEecCCeeEEEE
Confidence            3799999999999875 34 67767643221      0      01133333322221 3 3444443  3667889999


Q ss_pred             ecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          115 RYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 Edl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |+++  ..+|.+.+..+...     -.++.+|...|+.+|..+
T Consensus        89 e~~~--~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~  129 (267)
T PHA03390         89 DYIK--DGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHN  129 (267)
T ss_pred             EcCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9998  45888877665332     247778888888888765

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=92.70  E-value=1.7  Score=35.47  Aligned_cols=105  Identities=16%  Similarity=0.160  Sum_probs=66.8

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      ....+|.|....||++.+. ++ .+++|.-..  +.     ....++...|...|+.+..  |. +++++  +.+.+...
T Consensus        25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~--~~-----~~~~~~~~~e~~~l~~l~h--p~-i~~~~~~~~~~~~~~   94 (297)
T cd06659          25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDL--RK-----QQRRELLFNEVVIMRDYQH--QN-VVEMYKSYLVGEELW   94 (297)
T ss_pred             hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEe--cc-----cchHHHHHHHHHHHHhCCC--Cc-hhhhhhheeeCCeEE
Confidence            3446899999999999875 44 799996421  11     1223455566666665532  33 33333  44667889


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ++||+++ + ..|...+..+...    ..++.++...|+-+|...
T Consensus        95 iv~e~~~-~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~  137 (297)
T cd06659          95 VLMEFLQ-G-GALTDIVSQTRLNEEQIATVCESVLQALCYLHSQG  137 (297)
T ss_pred             EEEecCC-C-CCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999998 3 4666655444332    257788888898888664

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=92.65  E-value=1.9  Score=34.72  Aligned_cols=104  Identities=19%  Similarity=0.105  Sum_probs=64.7

Q ss_pred             EeccCCceeEEEEEEeCC-----C--eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCC
Q 045250           38 KEVGDGNLNFVYIVVGTS-----G--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRT  108 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~~-----g--svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e  108 (165)
                      +.+|.|....||++.+..     +  .+.+|.-......      -...+...|...|+.+..  |.. .+++.  .+.+
T Consensus         6 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~------~~~~~~~~E~~~l~~l~h--~~i-v~~~~~~~~~~   76 (290)
T cd05045           6 KTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASS------SELRDLLSEFNLLKQVNH--PHV-IKLYGACSQDG   76 (290)
T ss_pred             ccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCH------HHHHHHHHHHHHHhhCCC--CCE-eeEEEEEecCC
Confidence            567888888899987641     2  4666655422110      112466678777876642  433 33433  3557


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCC-----------------------------CHHHHHHHHHHHHHHHhcc
Q 045250          109 MSLIGMRYLEPPHIILRKGLIAGIK-----------------------------YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdl~~~~~~lr~~l~~g~~-----------------------------~~~~a~~iG~~La~~h~~t  152 (165)
                      ...++|||++  +..|++.+.....                             .-.++.++...|.-+|...
T Consensus        77 ~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~  147 (290)
T cd05045          77 PLLLIVEYAK--YGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK  147 (290)
T ss_pred             CcEEEEEecC--CCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence            7889999998  4578777654321                             0256778888888888654

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=92.65  E-value=1.7  Score=35.31  Aligned_cols=106  Identities=17%  Similarity=0.068  Sum_probs=66.3

Q ss_pred             eEeccCCceeEEEEEEeCC-C---eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCc
Q 045250           37 IKEVGDGNLNFVYIVVGTS-G---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMS  110 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~-g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~  110 (165)
                      ...+|.|....||++.+.+ |   .+.+|.-......      ....+...|.+.++.+... |..+ +++.+  +....
T Consensus         7 ~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~------~~~~~~~~E~~~l~~l~~h-p~iv-~~~~~~~~~~~~   78 (297)
T cd05089           7 EDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASE------NDHRDFAGELEVLCKLGHH-PNII-NLLGACENRGYL   78 (297)
T ss_pred             eeeecCCCcceEEEEEecCCCCcceeEEEEccccCCH------HHHHHHHHHHHHHHhhcCC-Cchh-heEEEEccCCcc
Confidence            4568999999999997753 2   3566654432221      1234666788888776443 4433 34333  44556


Q ss_pred             eEEEecCCCCchHHHHHHHcCC-----------------CC----HHHHHHHHHHHHHHHhcc
Q 045250          111 LIGMRYLEPPHIILRKGLIAGI-----------------KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdl~~~~~~lr~~l~~g~-----------------~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .++||+.+  ..+|.+.+.+..                 ..    -.++.+|...|+.+|...
T Consensus        79 ~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~  139 (297)
T cd05089          79 YIAIEYAP--YGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ  139 (297)
T ss_pred             eEEEEecC--CCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            79999997  347777765432                 11    246778888999999754

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=92.60  E-value=0.79  Score=40.61  Aligned_cols=104  Identities=13%  Similarity=0.028  Sum_probs=64.2

Q ss_pred             eeEeccCCceeEEEEEEeC-C-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCc
Q 045250           36 TIKEVGDGNLNFVYIVVGT-S-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMS  110 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~  110 (165)
                      -.+.+|.|..-.||++... + + .+++|.....-       .-...+.+.|.++|+.+..  | .+++++  +.+.+..
T Consensus        71 ~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~-------~~~~~~~~~E~~~l~~l~H--p-niv~~~~~~~~~~~~  140 (478)
T PTZ00267         71 LTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND-------ERQAAYARSELHCLAACDH--F-GIVKHFDDFKSDDKL  140 (478)
T ss_pred             EEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC-------HHHHHHHHHHHHHHHhCCC--C-CEeEEEEEEEECCEE
Confidence            4567788888889988764 3 3 68888643111       1122355667777766542  2 344444  3466788


Q ss_pred             eEEEecCCCCchHHHHHHHc----CCCC-----HHHHHHHHHHHHHHHhc
Q 045250          111 LIGMRYLEPPHIILRKGLIA----GIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       111 ~~vMEdl~~~~~~lr~~l~~----g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      .+||||++  ...|.+.|.+    ...+     -.++.+|...|.-+|..
T Consensus       141 ~lv~E~~~--gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~  188 (478)
T PTZ00267        141 LLIMEYGS--GGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR  188 (478)
T ss_pred             EEEEECCC--CCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999997  3456554432    2122     13667888889988865

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=92.58  E-value=1.9  Score=36.18  Aligned_cols=109  Identities=22%  Similarity=0.215  Sum_probs=74.6

Q ss_pred             eeEeccCCceeEEEEEEeCCC---eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhcc-CCCCCceEEEEc---CC
Q 045250           36 TIKEVGDGNLNFVYIVVGTSG---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKL-CPDHVPEVYHFD---RT  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~-~p~~vP~v~~~D---~e  108 (165)
                      -...+|.|-...||.|.+.+.   .+++|--......      .+ .+...|..+|..+... -+..+|.++..-   ..
T Consensus        22 i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~------~~-~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~   94 (322)
T KOG1164|consen   22 LGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGS------KP-SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTED   94 (322)
T ss_pred             EeeeccccCCceEEEEEecCCCCeeEEEEEEEecccC------CC-ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCc
Confidence            677899999999999998753   4666655443332      12 2778899999988862 246889998766   34


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhc
Q 045250          109 MSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       109 ~~~~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~  151 (165)
                      -+.+||+-++++...||...-.++.-.    .+|-++...|-.+|..
T Consensus        95 ~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~  141 (322)
T KOG1164|consen   95 FNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK  141 (322)
T ss_pred             eeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc
Confidence            579999999976666665444233222    4666777777777754

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=92.51  E-value=1.8  Score=35.79  Aligned_cols=107  Identities=15%  Similarity=-0.012  Sum_probs=67.3

Q ss_pred             eEeccCCceeEEEEEEeC--------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EEc
Q 045250           37 IKEVGDGNLNFVYIVVGT--------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY-HFD  106 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~--------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~D  106 (165)
                      .+.+|.|...-||++...        .+ .+.+|.......      .-...+...|.++++.+... |..+.-.- +.+
T Consensus        17 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-~~iv~~~~~~~~   89 (334)
T cd05100          17 GKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDAT------DKDLSDLVSEMEMMKMIGKH-KNIINLLGACTQ   89 (334)
T ss_pred             cceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccC------HHHHHHHHHHHHHHHhhcCC-CCeeeeeEEEcc
Confidence            578999999999999742        11 577776542211      11234667788888877543 43333222 234


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCC-----------------CC----HHHHHHHHHHHHHHHhcc
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLIAGI-----------------KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~~g~-----------------~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .....++||+++  ..+|++.+.+..                 ..    -.++.+|...|+-+|...
T Consensus        90 ~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g  154 (334)
T cd05100          90 DGPLYVLVEYAS--KGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK  154 (334)
T ss_pred             CCceEEEEecCC--CCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            455679999998  347888776521                 11    136788999999999654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=92.40  E-value=1.3  Score=35.78  Aligned_cols=105  Identities=16%  Similarity=0.108  Sum_probs=66.2

Q ss_pred             eeEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEc
Q 045250           36 TIKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFD  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D  106 (165)
                      -...+|.|...-||++...      ++ .+.+|.-.-..       .-...+...|.++|+.+..  |. +++++  +.+
T Consensus         9 ~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~-------~~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~   78 (288)
T cd05093           9 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-------DNARKDFHREAELLTNLQH--EH-IVKFYGVCVE   78 (288)
T ss_pred             eccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC-------HHHHHHHHHHHHHHHhCCC--CC-cceEEEEEec
Confidence            3456889999999999752      22 46667543111       1123456678888877642  43 33443  346


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCC--------------CC----HHHHHHHHHHHHHHHhcc
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLIAGI--------------KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~~g~--------------~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .....++||+.+  ...|.+.+....              ..    -.++.+|...|+-+|...
T Consensus        79 ~~~~~lv~e~~~--~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~  140 (288)
T cd05093          79 GDPLIMVFEYMK--HGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH  140 (288)
T ss_pred             CCccEEEEEcCC--CCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            678889999997  447777665321              11    246778888898888765

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=92.38  E-value=1.7  Score=36.09  Aligned_cols=106  Identities=12%  Similarity=0.033  Sum_probs=65.2

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--------E
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--------F  105 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--------~  105 (165)
                      .+..||.|....||++.+. ++ .++||.-..-..     -.....+...|.++|+.+..  |..+ +++.        .
T Consensus        19 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--~~iv-~~~~~~~~~~~~~   90 (343)
T cd07878          19 NLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ-----SLIHARRTYRELRLLKHMKH--ENVI-GLLDVFTPATSIE   90 (343)
T ss_pred             hheecccCCCeEEEEEEECCCCCEEEEEEeCchhh-----hhHHHHHHHHHHHHHHhcCC--Cchh-hhhhhhccccccc
Confidence            4578999999999999875 44 788997542211     11234566678888887753  2221 1111        1


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250          106 DRTMSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~e~~~~vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ......++||+++.   .|.+.+..+...    ..++.+|...|.-+|...
T Consensus        91 ~~~~~~~~~~~~~~---~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  138 (343)
T cd07878          91 NFNEVYLVTNLMGA---DLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAG  138 (343)
T ss_pred             ccCcEEEEeecCCC---CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            22345788998873   344444334332    257788888888898654

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=92.32  E-value=2  Score=34.89  Aligned_cols=97  Identities=6%  Similarity=-0.125  Sum_probs=60.9

Q ss_pred             EEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCce-EEEEcCCCceEEEecCCCCchHHH
Q 045250           47 FVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPE-VYHFDRTMSLIGMRYLEPPHIILR  125 (165)
Q Consensus        47 ~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~-v~~~D~e~~~~vMEdl~~~~~~lr  125 (165)
                      +|++....+..++||.-.....     ..-..++...|.+.|+.+..  |..++- -.+.+.+...++||+++  +..++
T Consensus        17 ~~~~~~~~~~~~avK~~~~~~~-----~~~~~~~~~~Ei~~l~~l~h--~~i~~~~~~~~~~~~~~~~~e~~~--~~~l~   87 (314)
T cd08216          17 HLAKHKPTNTLVAVKKINLDSC-----SKEDLKLLQQEIITSRQLQH--PNILPYVTSFIVDSELYVVSPLMA--YGSCE   87 (314)
T ss_pred             EEEEecCCCCEEEEEEEecccc-----chhHHHHHHHHHHHHHhcCC--cchhhhhheeecCCeEEEEEeccC--CCCHH
Confidence            4444444323888888643211     12345788889999988753  443332 14556778899999998  45677


Q ss_pred             HHHHcC--C-CC----HHHHHHHHHHHHHHHhcc
Q 045250          126 KGLIAG--I-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       126 ~~l~~g--~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +.+.+.  . ..    ..++.+|...|+-+|...
T Consensus        88 ~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~  121 (314)
T cd08216          88 DLLKTHFPEGLPELAIAFILKDVLNALDYIHSKG  121 (314)
T ss_pred             HHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            766542  1 11    246778888888888754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=92.30  E-value=1.4  Score=34.56  Aligned_cols=108  Identities=16%  Similarity=-0.006  Sum_probs=70.1

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceEE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~v  113 (165)
                      ...+|.|...-||++.+. ++ .+++|......-..    .-..++...|.+.|+.+..  |..++-. .+.+.+...+|
T Consensus         5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv   78 (258)
T cd05578           5 LRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVE----KGSVRNVLNERRILQELNH--PFLVNLWYSFQDEENMYLV   78 (258)
T ss_pred             EEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcc----hhHHHHHHHHHHHHHhCCC--CChHHHHHhhcCCCeEEEE
Confidence            567899999999999986 35 78888775322100    0124567778777776643  4333322 23356778899


Q ss_pred             EecCCCCchHHHHHHHcC-CCCH----HHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIAG-IKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g-~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      ||++.  +..|+..+... ...+    .++.+|...|+-+|...
T Consensus        79 ~e~~~--~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~  120 (258)
T cd05578          79 VDLLL--GGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKG  120 (258)
T ss_pred             EeCCC--CCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99997  45777777654 3222    46677888888888653

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=92.23  E-value=0.56  Score=36.98  Aligned_cols=109  Identities=19%  Similarity=0.053  Sum_probs=62.3

Q ss_pred             EeccCCceeEEEEEEeCCC--eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCC-ceEEEEcCCCceEEE
Q 045250           38 KEVGDGNLNFVYIVVGTSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHV-PEVYHFDRTMSLIGM  114 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~~g--svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~v-P~v~~~D~e~~~~vM  114 (165)
                      +.+|.|....||++.+...  ...+|........  ..-+-...+...|..+++.+..  |..+ +.-+..+.+...++|
T Consensus         6 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~   81 (260)
T cd08222           6 QRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVG--ELNPNETVQANQEAQLLSKLDH--PAIVKFHASFLERDAFCIIT   81 (260)
T ss_pred             eeecCCCCceEEEEEecCCCCcceEEEecccccc--ccCcchHHHHHHHHHHHHhCCC--CcHHHHHHHHhcCCceEEEE
Confidence            6789999999999987632  3444443322210  1011223455667777776542  3322 112345677788999


Q ss_pred             ecCCCCchHHHHHHHc----CC-CC----HHHHHHHHHHHHHHHhcc
Q 045250          115 RYLEPPHIILRKGLIA----GI-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 Edl~~~~~~lr~~l~~----g~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      |+++.  ..|...+.+    +. ..    -.++.++...|..+|...
T Consensus        82 e~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~  126 (260)
T cd08222          82 EYCEG--RDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR  126 (260)
T ss_pred             EeCCC--CCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC
Confidence            99983  355444432    22 22    245677888888888653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=92.20  E-value=2.4  Score=33.36  Aligned_cols=105  Identities=15%  Similarity=0.080  Sum_probs=63.4

Q ss_pred             EeccCCceeEEEEEEeCC----C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--CC--
Q 045250           38 KEVGDGNLNFVYIVVGTS----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD--RT--  108 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--~e--  108 (165)
                      +.+|.|....||++....    + .++||.-.....     -.-..++...|.+.|+....  | .+.+++.+.  .+  
T Consensus         5 ~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~e~~~l~~l~h--~-~iv~~~~~~~~~~~~   76 (273)
T cd05035           5 KILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH-----TYSEIEEFLSEAACMKDFDH--P-NVMKLIGVCFEASSL   76 (273)
T ss_pred             cccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC-----CHHHHHHHHHHHHHHHhCCC--C-CeeeEEeeeccCCcc
Confidence            467889999999998642    2 588886432111     01123456677777776542  3 344444332  22  


Q ss_pred             ----CceEEEecCCCCchHHHHHHHcC------CCC-----HHHHHHHHHHHHHHHhcc
Q 045250          109 ----MSLIGMRYLEPPHIILRKGLIAG------IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ----~~~~vMEdl~~~~~~lr~~l~~g------~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                          ...++|||++  +..|.+.+...      ...     -.++.++...|+-+|...
T Consensus        77 ~~~~~~~~v~e~~~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~  133 (273)
T cd05035          77 QKIPKPMVILPFMK--HGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN  133 (273)
T ss_pred             ccCcccEEEEeccC--CCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence                2589999997  44666665331      111     236788889999999754

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=92.18  E-value=1.8  Score=35.23  Aligned_cols=108  Identities=13%  Similarity=0.053  Sum_probs=65.6

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCce-EEEEcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPE-VYHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~-v~~~D~e~~~~  112 (165)
                      .+..+|.|..+.||++... +| .+++|.-.......    .-...+...|.+.|+.+..  |..+.- -++.+.+...+
T Consensus        19 ~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~----~~~~~~~~~Ei~~l~~l~h--~niv~~~~~~~~~~~~~l   92 (307)
T cd06607          19 DLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQS----NEKWQDIIKEVRFLQQLRH--PNTIEYKGCYLREHTAWL   92 (307)
T ss_pred             hheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCc----HHHHHHHHHHHHHHHhCCC--CCEEEEEEEEEeCCeEEE
Confidence            5678999999999999875 34 78888653211110    0112345667777776642  332221 13457788899


Q ss_pred             EEecCCCCchHHHHHHHc--CCCC----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIA--GIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~--g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||||+..   .+.+.+..  +...    -.++.+|...|+-+|...
T Consensus        93 v~e~~~g---~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~  135 (307)
T cd06607          93 VMEYCLG---SASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHE  135 (307)
T ss_pred             EHHhhCC---CHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999973   22233322  2222    247788899999999653

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=92.15  E-value=3.1  Score=34.20  Aligned_cols=107  Identities=13%  Similarity=0.064  Sum_probs=65.1

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCC-ChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPM-TKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l-~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~  111 (165)
                      .+..+|.|....||++.+. +| .+++|.-...     ..+.. ...+...|.++|+.+..  |..++-. ++.+.....
T Consensus        29 ~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~-----~~~~~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~  101 (317)
T cd06635          29 DLREIGHGSFGAVYFARDVRTNEVVAIKKMSYS-----GKQSNEKWQDIIKEVKFLQRIKH--PNSIEYKGCYLREHTAW  101 (317)
T ss_pred             hhheeccCCCeEEEEEEEcCCCcEEEEEEEecC-----CCCchHHHHHHHHHHHHHHhCCC--CCEEEEEEEEeeCCeEE
Confidence            5677999999999999875 44 7888853211     01111 12356667778876642  4433332 234667788


Q ss_pred             EEEecCCCCchHHHHHHHc-C-CCC----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIA-G-IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~-g-~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +||||++ +  .+-+.+.. + ...    -.++.+|...|+-+|...
T Consensus       102 lv~e~~~-g--~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~  145 (317)
T cd06635         102 LVMEYCL-G--SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN  145 (317)
T ss_pred             EEEeCCC-C--CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998 3  23333322 2 222    236678888888888764

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=92.05  E-value=1  Score=35.68  Aligned_cols=106  Identities=17%  Similarity=0.067  Sum_probs=70.0

Q ss_pred             eEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCc-eEEEEcCCCceEE
Q 045250           37 IKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVP-EVYHFDRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP-~v~~~D~e~~~~v  113 (165)
                      +..+|.|...-||++...+ + .+++|.-......     .--......|.++|+.+.  .|..++ .-+..+.+...+|
T Consensus         4 ~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-----~~~~~~~~~e~~~l~~~~--~~~i~~~~~~~~~~~~~~~v   76 (282)
T cd07829           4 LEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEE-----EGIPSTALREISLLKELK--HPNIVKLLDVIHTERKLYLV   76 (282)
T ss_pred             ehcccccCcceEEEeeecCCCcEEEEEEecccccc-----ccccHHHHHHHHHHHhcC--CCCHHHHHhhhhcCCceEEE
Confidence            3457888889999998864 5 8888876644311     111245567888888775  233222 1133466789999


Q ss_pred             EecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+.+ .  .|++.+.+.  ...    -.++.++...|+.+|...
T Consensus        77 ~e~~~-~--~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~  118 (282)
T cd07829          77 FEYCD-M--DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHR  118 (282)
T ss_pred             ecCcC-c--CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99998 2  688877765  222    257788888899998764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=91.97  E-value=1.3  Score=35.67  Aligned_cols=104  Identities=18%  Similarity=0.123  Sum_probs=64.2

Q ss_pred             eEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcC
Q 045250           37 IKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDR  107 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~  107 (165)
                      ...+|.|..+-||++...      ++ .+.+|.-....       .-.......|.++|+.+..  | .+.+++  +.+.
T Consensus        10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~   79 (291)
T cd05094          10 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT-------LAARKDFQREAELLTNLQH--E-HIVKFYGVCGDG   79 (291)
T ss_pred             eeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc-------HHHHHHHHHHHHHHhcCCC--C-CcceEEEEEccC
Confidence            467888989999999753      12 36666643211       1112344556667766542  3 334433  3455


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCC-----------------C----CHHHHHHHHHHHHHHHhcc
Q 045250          108 TMSLIGMRYLEPPHIILRKGLIAGI-----------------K----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 e~~~~vMEdl~~~~~~lr~~l~~g~-----------------~----~~~~a~~iG~~La~~h~~t  152 (165)
                      +...+|||+++  ..+|.+.+..+.                 .    .-.++.+|...|+-+|...
T Consensus        80 ~~~~lv~e~~~--~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~  143 (291)
T cd05094          80 DPLIMVFEYMK--HGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH  143 (291)
T ss_pred             CceEEEEecCC--CCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            66799999998  347777765421                 1    1257788999999998765

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=91.96  E-value=0.8  Score=36.18  Aligned_cols=104  Identities=15%  Similarity=0.010  Sum_probs=62.7

Q ss_pred             eccCCceeEEEEEEeCC-------C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCC
Q 045250           39 EVGDGNLNFVYIVVGTS-------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTM  109 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~~-------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~  109 (165)
                      .+|.|...-||++...+       + .++||.-.....      .-...+...|...|+.+..  |..++-+ +..+.+.
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~------~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~   73 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT------DQEKKEFLKEAHLMSNFNH--PNIVKLLGVCLLNEP   73 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhcccc------hhhHHHHHHHHHHHHhcCC--CCeeeEeeeecCCCC
Confidence            47888888999988641       1 466665321110      1123455567777776632  4333322 3456777


Q ss_pred             ceEEEecCCCCchHHHHHHHcCC-------CC-----HHHHHHHHHHHHHHHhcc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGI-------KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~-------~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ..++||+++  ...|.+.+.+..       ..     -.++.+|...|+-+|...
T Consensus        74 ~~~v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~  126 (269)
T cd05044          74 QYIIMELME--GGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH  126 (269)
T ss_pred             eEEEEeccC--CCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC
Confidence            899999998  347777665421       11     246778888888888653

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=91.95  E-value=1.4  Score=38.74  Aligned_cols=102  Identities=18%  Similarity=0.257  Sum_probs=75.2

Q ss_pred             EeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC--CceEE
Q 045250           38 KEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRT--MSLIG  113 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e--~~~~v  113 (165)
                      ..||.|+.-.+|-.++- ++ .|-||-..-+.+.  |       -.+-|+++.+.+..  -.-+|.+|+|-++  .+++|
T Consensus        34 kKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~A--P-------QLrdEYr~YKlL~g--~~GIP~vYYFGqeG~~NiLV  102 (449)
T KOG1165|consen   34 KKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEA--P-------QLRDEYRTYKLLGG--TEGIPQVYYFGQEGKYNILV  102 (449)
T ss_pred             cccccCcceeeecccccccCceEEEEeccccCCc--c-------hHHHHHHHHHHHcC--CCCCCceeeeccccchhhhh
Confidence            56889999999888764 45 8999987755542  2       46789999999885  3457999999997  48999


Q ss_pred             EecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||-|+|...+|-+..  |..|     .-+|.++-+-+-.+|...
T Consensus       103 idLLGPSLEDLFD~C--gR~FSvKTV~miA~Qmi~rie~vH~k~  144 (449)
T KOG1165|consen  103 IDLLGPSLEDLFDLC--GRRFSVKTVAMIAKQMITRIEYVHEKD  144 (449)
T ss_pred             hhhhCcCHHHHHHHh--cCcccHHhHHHHHHHHHHHHHHHHhcc
Confidence            999998666665533  4444     246777777777777653

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=91.79  E-value=1.9  Score=33.89  Aligned_cols=104  Identities=14%  Similarity=0.098  Sum_probs=62.6

Q ss_pred             eccCCceeEEEEEEeCC----C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250           39 EVGDGNLNFVYIVVGTS----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~  111 (165)
                      .+|.|....||++...+    + .+++|.......      .-..++...|...|+...  .|..++-.-.+  +.....
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~e~~~l~~l~--h~~iv~~~~~~~~~~~~~~   73 (262)
T cd05058           2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITD------LEEVEQFLKEGIIMKDFS--HPNVLSLLGICLPSEGSPL   73 (262)
T ss_pred             cccccCCceEEEEEEecCCCceEEEEEEecCccCC------HHHHHHHHHHHHHHccCC--CCCcceEEEEeecCCCCcE
Confidence            47888889999987532    2 588886432111      112345556766665543  24444433222  334478


Q ss_pred             EEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ++||+..  ...|.+.+.+..  ..    -.++.+|...|+-+|...
T Consensus        74 lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  118 (262)
T cd05058          74 VVLPYMK--HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKK  118 (262)
T ss_pred             EEEecCC--CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999997  346777765432  11    246678999999998754

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=91.75  E-value=1.7  Score=38.07  Aligned_cols=105  Identities=18%  Similarity=0.181  Sum_probs=72.7

Q ss_pred             EeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCC--CceEEEEcCCCceEE
Q 045250           38 KEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDH--VPEVYHFDRTMSLIG  113 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~--vP~v~~~D~e~~~~v  113 (165)
                      +++|.|..-.||++.... | .+-+|.-...... +.   .+.+-...|..+|+.+... |..  .+.+ +-|+....+|
T Consensus        41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~-~~---~~~~~v~~Ev~il~~l~~h-pniv~l~~~-~e~~~~~~lv  114 (382)
T KOG0032|consen   41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLR-GK---EDREDVRREVAILQQLSGH-PNIVQLKDA-FEDPDSVYLV  114 (382)
T ss_pred             hhhCCCCceEEEEEEecCCCceeEEEEeehhhcc-cc---ccHHHHHHHHHHHHhccCC-CCEEEEEEE-EEcCCeEEEE
Confidence            689999999999999874 5 5666655443322 22   2667888999999999863 332  2332 3345567899


Q ss_pred             EecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 045250          114 MRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      ||.+.  +..|.+.+.+.. +     ..++.+|...+..+|..
T Consensus       115 mEL~~--GGeLfd~i~~~~-~sE~da~~~~~~il~av~~lH~~  154 (382)
T KOG0032|consen  115 MELCE--GGELFDRIVKKH-YSERDAAGIIRQILEAVKYLHSL  154 (382)
T ss_pred             EEecC--CchHHHHHHHcc-CCHHHHHHHHHHHHHHHHHHHhC
Confidence            99998  457777777762 3     35677778888888873

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=91.72  E-value=1.3  Score=36.97  Aligned_cols=105  Identities=19%  Similarity=0.151  Sum_probs=64.0

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--------E
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--------F  105 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--------~  105 (165)
                      .+..+|.|....||++.+. +| .++||.-..-..     ......+...|.++|+.+..  |..+ +++.        .
T Consensus        19 ~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~e~~~l~~l~h--~niv-~~~~~~~~~~~~~   90 (342)
T cd07879          19 SLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ-----SEIFAKRAYRELTLLKHMQH--ENVI-GLLDVFTSAVSGD   90 (342)
T ss_pred             EEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc-----cccchhHHHHHHHHHHhcCC--CCcc-chhheecccccCC
Confidence            5688999999999999875 45 799996532111     11223456678888877643  3222 2222        1


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250          106 DRTMSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~e~~~~vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +.....+|||+++.   .++..+ .....    ..++.++...|+-+|...
T Consensus        91 ~~~~~~lv~e~~~~---~l~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~  137 (342)
T cd07879          91 EFQDFYLVMPYMQT---DLQKIM-GHPLSEDKVQYLVYQMLCGLKYIHSAG  137 (342)
T ss_pred             CCceEEEEeccccc---CHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            22345899999972   444433 22222    246778888999999765

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=91.71  E-value=2.7  Score=33.64  Aligned_cols=106  Identities=15%  Similarity=0.152  Sum_probs=62.7

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~  112 (165)
                      ...+|.|....||++.+. +| .+.+|+-.....      .-...+...|...|...... | .+++++  .+++....+
T Consensus         9 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~e~~~l~~~~~~-~-~iv~~~~~~~~~~~~~~   80 (288)
T cd06616           9 LGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD------EKEQKRLLMDLDVVMRSSDC-P-YIVKFYGALFREGDCWI   80 (288)
T ss_pred             HHHhCCCCceEEEEEEECCCCCEEEEEEehhccC------hHHHHHHHHHHHHHHHhcCC-C-CEeeeeeEEecCCcEEE
Confidence            456889999999999876 34 788897442111      12233455566666655432 3 344444  456778889


Q ss_pred             EEecCCCCchHHHHHHH---cCCCC----HHHHHHHHHHHHHHHh
Q 045250          113 GMRYLEPPHIILRKGLI---AGIKY----PLLAEHMSEFMAKTLF  150 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~---~g~~~----~~~a~~iG~~La~~h~  150 (165)
                      +||+++.....+...+.   .+...    ..++.++...|+-+|.
T Consensus        81 ~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~  125 (288)
T cd06616          81 CMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE  125 (288)
T ss_pred             EEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            99998743334433322   12222    2466677777777764

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=91.66  E-value=2  Score=34.53  Aligned_cols=107  Identities=15%  Similarity=-0.021  Sum_probs=67.2

Q ss_pred             eeEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--Ec
Q 045250           36 TIKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FD  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D  106 (165)
                      ..+.+|.|....||++...      .+ .+++|........      -...+...|.++|+.+.+. |.. -+++.  .+
T Consensus        16 ~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~------~~~~~~~~E~~~l~~l~~h-~~i-~~~~~~~~~   87 (293)
T cd05053          16 LGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATE------KDLSDLVSEMEMMKMIGKH-KNI-INLLGVCTQ   87 (293)
T ss_pred             EeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCH------HHHHHHHHHHHHHHhhcCC-CCe-eeEEEEEcC
Confidence            4577898988999998753      12 5788866532210      1124566788888776443 332 23333  34


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCC-----------------CC----HHHHHHHHHHHHHHHhcc
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLIAGI-----------------KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~~g~-----------------~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .....++|||++ + .+|.+.+....                 ..    -.++.+|...|+-+|...
T Consensus        88 ~~~~~li~e~~~-~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~  152 (293)
T cd05053          88 EGPLYVVVEYAA-H-GNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK  152 (293)
T ss_pred             CCCeEEEEEeCC-C-CcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence            456789999998 3 37777765321                 11    247888999999999653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=91.41  E-value=0.45  Score=37.35  Aligned_cols=63  Identities=17%  Similarity=0.112  Sum_probs=44.0

Q ss_pred             HHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccc
Q 045250           82 YFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTS  153 (165)
Q Consensus        82 ~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ts  153 (165)
                      ..|.++++.+++  -+..|++|+++++.  .|.||+.  +..+...-+   ..|.+...|+..|+++|...-
T Consensus        21 ~~E~~~~~~l~~--~g~~p~~~~~~~~g--~v~e~i~--g~~l~~~~~---~~~~~~~~iA~~l~~lH~~~~   83 (211)
T PF01633_consen   21 ENENEALKLLSE--AGLGPKIIYFFENG--RVEEFIE--GRTLSPEDF---RNPEILKRIAKLLAKLHSIPI   83 (211)
T ss_dssp             HHHHHHHHHHHH--TTSSS-EEEEETTE--EEEE--S--SEE--CGGG---GSHHHHHHHHHHHHHHHTHHH
T ss_pred             HHHHHHHHHHHH--cCCCCeEEEEcCCC--cEEEEec--ccccChhhc---cChHHHHHHHHHHHHHhhccc
Confidence            568889988887  57899999998665  5779996  556543211   246789999999999998665

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=91.27  E-value=2.2  Score=39.56  Aligned_cols=104  Identities=18%  Similarity=0.114  Sum_probs=78.9

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCC---CCceEE--EEcCC
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPD---HVPEVY--HFDRT  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~---~vP~v~--~~D~e  108 (165)
                      .++.||-|..--|.|+.+. ++ -|.||-=....+-        .....+|..+|..+.+.-|+   ++-+.|  ++...
T Consensus       190 V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f--------~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~  261 (586)
T KOG0667|consen  190 VLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRF--------LRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRN  261 (586)
T ss_pred             EEEEecccccceeEEEEecCCCcEEEEEeeccChHH--------HHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccc
Confidence            3677888888888888876 35 6888876655443        26889999999999987665   444444  45568


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCC-------CHHHHHHHHHHHHHHHh
Q 045250          109 MSLIGMRYLEPPHIILRKGLIAGIK-------YPLLAEHMSEFMAKTLF  150 (165)
Q Consensus       109 ~~~~vMEdl~~~~~~lr~~l~~g~~-------~~~~a~~iG~~La~~h~  150 (165)
                      ...+|.|-|+   .+|++.|...+-       ...++.+|.+.|..+|.
T Consensus       262 HlciVfELL~---~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~  307 (586)
T KOG0667|consen  262 HLCIVFELLS---TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHE  307 (586)
T ss_pred             ceeeeehhhh---hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            8899999997   699998877652       23689999999999984

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=91.19  E-value=2.2  Score=35.88  Aligned_cols=63  Identities=19%  Similarity=0.129  Sum_probs=35.9

Q ss_pred             HHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCC---chHHHHHHHcCCCCHHHHHHHHHHHHHHH
Q 045250           84 EALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPP---HIILRKGLIAGIKYPLLAEHMSEFMAKTL  149 (165)
Q Consensus        84 E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vMEdl~~~---~~~lr~~l~~g~~~~~~a~~iG~~La~~h  149 (165)
                      |..-|+++.+ +...||+.|  .-.++++|||++|++   ...|++.=........+-+.+-+.+.++.
T Consensus       118 Ef~NL~R~~e-AGVrvP~Pi--~~~~nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~  183 (268)
T COG1718         118 EFRNLKRAYE-AGVRVPEPI--AFRNNVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLY  183 (268)
T ss_pred             HHHHHHHHHH-cCCCCCCce--eecCCeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHH
Confidence            3344555555 367899999  568999999999963   33455422221111233444445554443

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=91.04  E-value=3.9  Score=33.39  Aligned_cols=108  Identities=13%  Similarity=0.060  Sum_probs=64.4

Q ss_pred             eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~~  112 (165)
                      .+..+|.|....||++.+.. + .+++|+.......  .  .-...+...|.+.|+.+..  |..++-. ++.+.....+
T Consensus        19 ~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~--~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~l   92 (308)
T cd06634          19 DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ--S--NEKWQDIIKEVRFLQKLRH--PNTIQYRGCYLREHTAWL   92 (308)
T ss_pred             HHHheeeCCCEEEEEEEEcCCCcEEEEEEEeccccc--C--hHHHHHHHHHHHHHHhCCC--CCcccEEEEEEcCCeeEE
Confidence            45678888888999999763 4 6888866432111  0  0112345567778877642  4433322 3457778889


Q ss_pred             EEecCCCCchHHHHHHH-cCCC-C----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLI-AGIK-Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~-~g~~-~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||++. +  .+.+.+. .+.. .    -.++.++...|.-+|...
T Consensus        93 v~e~~~-~--~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~  135 (308)
T cd06634          93 VMEYCL-G--SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN  135 (308)
T ss_pred             EEEccC-C--CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999997 3  2334332 2322 2    134566777777888643

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=90.96  E-value=1.7  Score=35.85  Aligned_cols=104  Identities=13%  Similarity=-0.021  Sum_probs=61.2

Q ss_pred             eccCC--ceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCceE
Q 045250           39 EVGDG--NLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV--YHFDRTMSLI  112 (165)
Q Consensus        39 ~l~~G--n~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~e~~~~  112 (165)
                      ++|.|  +...||++.+. .| .+.||.-..-...  .   -..++...|...++.+..  |. +.++  ++.+.+...+
T Consensus         5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~--~---~~~~~~~~e~~~~~~l~h--~n-iv~~~~~~~~~~~~~~   76 (328)
T cd08226           5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCT--E---EHLKALQNEVVLSHFFRH--PN-IMTSWTVFTTGSWLWV   76 (328)
T ss_pred             HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCC--H---HHHHHHHHHHHHHHhCCC--CC-cceEeeeEecCCceEE
Confidence            46666  55569999875 45 7888875422110  0   112445556666654432  33 3333  3346677889


Q ss_pred             EEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +||++.  +..+.+.+.+..   ..    -.++.+|...|+-+|...
T Consensus        77 v~e~~~--~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~  121 (328)
T cd08226          77 ISPFMA--YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG  121 (328)
T ss_pred             EEeccc--CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999998  345555554421   11    147788899999888643

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05124 AFK Actin-Fragmin Kinase (AFK); catalytic domain

Probab=90.82  E-value=1.8  Score=35.82  Aligned_cols=30  Identities=20%  Similarity=0.295  Sum_probs=25.3

Q ss_pred             ceeEeccCCceeEEEEEEeCCCeEEEEecC
Q 045250           35 LTIKEVGDGNLNFVYIVVGTSGSFVIKQAL   64 (165)
Q Consensus        35 ~~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~   64 (165)
                      +++...|||++-.++-|...+|.+|||-+.
T Consensus         2 ie~i~~s~s~~~~~~F~~s~~~a~ViK~s~   31 (238)
T cd05124           2 IKAIDLSDSGVFGALFVESESGAIVVKSSP   31 (238)
T ss_pred             ceEEEecCCceEEEEEEcCCCcEEEEEcCc
Confidence            567889999998888888777899999874

The AFK catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). AFK is found in slime molds, ciliates, and flowering plants. It catalyzes the transfer of the gamma-phosphoryl group from ATP specifically to threonine residues in the actin-fragmin complex. The phosphorylation sites are located at a minor contact site for DNase I and at an actin-actin contact site. Fragmin is an actin-binding protein that functions as a regulator of the microfilament system. It interferes with the growth of F-actin by severing actin filaments and capping their ends. The phosphorylation of the actin-fragmin complex inhibits its nucleation activity and results in calcium-dependent capping activity. Thus, AFK plays a role in regulating ac

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=90.71  E-value=3  Score=32.66  Aligned_cols=93  Identities=14%  Similarity=0.079  Sum_probs=54.1

Q ss_pred             CceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceEEEecCC
Q 045250           43 GNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLIGMRYLE  118 (165)
Q Consensus        43 Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~vMEdl~  118 (165)
                      |...-||+|.+. +| .+++|+-.....       .     ..|...+.  ....|. +++++  +.+.+...++||+++
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~-------~-----~~~~~~~~--~~~~~~-i~~~~~~~~~~~~~~lv~e~~~   68 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSSE-------Y-----SRERLTII--PHCVPN-MVCLHKYIVSEDSVFLVLQHAE   68 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchhh-------h-----hhHHHHHH--hcCCCc-eeehhhheecCCeEEEEEecCC
Confidence            666678999886 44 899997643211       1     11222211  111222 23333  346678889999998


Q ss_pred             CCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          119 PPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       119 ~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                        ...|.+.+.+....     -.++.++...|..+|...
T Consensus        69 --~~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~  105 (237)
T cd05576          69 --GGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREG  105 (237)
T ss_pred             --CCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence              34666666554322     246677788888888654

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=90.67  E-value=2  Score=35.84  Aligned_cols=107  Identities=14%  Similarity=0.074  Sum_probs=67.0

Q ss_pred             eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCC----
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRT----  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e----  108 (165)
                      .+..+|.|....||++.+.. + .++||.-..-..     -.-...+...|..+|+.+..  |..++-. ++.+.+    
T Consensus        19 ~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~~   91 (343)
T cd07851          19 NLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQ-----SAIHAKRTYRELRLLKHMDH--ENVIGLLDVFTPASSLED   91 (343)
T ss_pred             EEEEeccCCceEEEEEEECCCCcEEEEEecccccc-----hhhHHHHHHHHHHHHHhccC--CCHHHHHHHhhccccccc
Confidence            57889999999999998863 4 788886432111     01223456678888877632  3333221 112222    


Q ss_pred             --CceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250          109 --MSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 --~~~~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                        ...+|||+++.   .|.+.+..+....    .++.+|...|+-+|...
T Consensus        92 ~~~~~lv~e~~~~---~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~g  138 (343)
T cd07851          92 FQDVYLVTHLMGA---DLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAG  138 (343)
T ss_pred             cccEEEEEecCCC---CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              26899999972   5666665554332    46778888888888754

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=90.63  E-value=5.7  Score=33.18  Aligned_cols=107  Identities=14%  Similarity=0.068  Sum_probs=64.0

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-------
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD-------  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-------  106 (165)
                      .++.+|.|....||++.+. +| .+++|.-..-.     .-....++...|.+.|+.+..  |..++-.-.+.       
T Consensus        21 ~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~Ei~~l~~l~h--~~iv~~~~~~~~~~~~~~   93 (345)
T cd07877          21 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-----QSIIHAKRTYRELRLLKHMKH--ENVIGLLDVFTPARSLEE   93 (345)
T ss_pred             EEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcc-----hhhHHHHHHHHHHHHHHHcCC--Ccccceeeeeeecccccc
Confidence            5678999999999999875 45 78888554211     111234567778888887653  33333221121       


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .....++||+++   ..+.+.+..+...    -.++.+|...|+-+|...
T Consensus        94 ~~~~~lv~~~~~---~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  140 (345)
T cd07877          94 FNDVYLVTHLMG---ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD  140 (345)
T ss_pred             cccEEEEehhcc---cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            122456777665   2454444433322    246778888888899765

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>PHA03207 serine/threonine kinase US3; Provisional

Probab=90.63  E-value=4.4  Score=34.67  Aligned_cols=100  Identities=10%  Similarity=-0.057  Sum_probs=64.3

Q ss_pred             eeEeccCCceeEEEEEEeC---CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCc
Q 045250           36 TIKEVGDGNLNFVYIVVGT---SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMS  110 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~---~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~  110 (165)
                      -+..||.|....||++...   .+ .++||....      .      .....|.++|+.+..  |..++-+ .+.+....
T Consensus        96 i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~------~------~~~~~E~~il~~l~h--~~iv~~~~~~~~~~~~  161 (392)
T PHA03207         96 ILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTG------G------KTPGREIDILKTISH--RAIINLIHAYRWKSTV  161 (392)
T ss_pred             EEEeecCCCCeEEEEEEEcCCccceeEEEEeccc------c------ccHHHHHHHHHhcCC--CCccceeeeEeeCCEE
Confidence            4577899999999998753   23 688886431      1      123468888887753  4433332 23345667


Q ss_pred             eEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          111 LIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      .++||+++.   .+.+.+......     -.++.+|...|+-+|...
T Consensus       162 ~lv~e~~~~---~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~g  205 (392)
T PHA03207        162 CMVMPKYKC---DLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRG  205 (392)
T ss_pred             EEEehhcCC---CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            899999872   455555433222     257788888899999764

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=90.58  E-value=3.7  Score=35.75  Aligned_cols=84  Identities=15%  Similarity=0.049  Sum_probs=53.7

Q ss_pred             eEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC
Q 045250           37 IKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DR  107 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~  107 (165)
                      .+.||.|-...||++...      .+ .+.||.-..-..      .-...+...|.++|+.+..+ | ++++++.+  +.
T Consensus        42 ~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~------~~~~~~~~~E~~~l~~l~~H-~-niv~~~~~~~~~  113 (401)
T cd05107          42 GRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR------SSEKQALMSELKIMSHLGPH-L-NIVNLLGACTKG  113 (401)
T ss_pred             hhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC------hhHHHHHHHHHHHHHhcCCC-C-CeEEEEEEEccC
Confidence            468999999999999853      22 588887642211      11234677788888877543 4 34444433  33


Q ss_pred             CCceEEEecCCCCchHHHHHHHc
Q 045250          108 TMSLIGMRYLEPPHIILRKGLIA  130 (165)
Q Consensus       108 e~~~~vMEdl~~~~~~lr~~l~~  130 (165)
                      ....+||||++  ..+|.+.+..
T Consensus       114 ~~~~iv~E~~~--~g~L~~~l~~  134 (401)
T cd05107         114 GPIYIITEYCR--YGDLVDYLHR  134 (401)
T ss_pred             CCcEEEEeccC--CCcHHHHHHh
Confidence            45679999998  3477776644

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>PTZ00036 glycogen synthase kinase; Provisional

Probab=90.53  E-value=4.6  Score=35.43  Aligned_cols=104  Identities=13%  Similarity=0.123  Sum_probs=60.0

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEc------
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFD------  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D------  106 (165)
                      -.+.||.|....||++... .+ .+.||.-...     .      .....|..+|+.+..  |..++-. ++++      
T Consensus        70 ~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~-----~------~~~~~Ei~il~~l~h--~niv~l~~~~~~~~~~~~  136 (440)
T PTZ00036         70 LGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD-----P------QYKNRELLIMKNLNH--INIIFLKDYYYTECFKKN  136 (440)
T ss_pred             EeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC-----c------chHHHHHHHHHhcCC--CCCcceeeeEeecccccC
Confidence            4677899999999999875 44 7889864311     1      123358888887743  3333321 1111      


Q ss_pred             CCC--ceEEEecCCCCch-HHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          107 RTM--SLIGMRYLEPPHI-ILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~e~--~~~vMEdl~~~~~-~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ...  ..+||||++.+.. .++.....+...     -.++.+|...|+-+|...
T Consensus       137 ~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~  190 (440)
T PTZ00036        137 EKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF  190 (440)
T ss_pred             CCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            111  2379999983211 122222233322     235678888999999754

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=90.01  E-value=4.6  Score=31.85  Aligned_cols=105  Identities=15%  Similarity=0.069  Sum_probs=64.7

Q ss_pred             EeccCCceeEEEEEEeC----CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC----C
Q 045250           38 KEVGDGNLNFVYIVVGT----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR----T  108 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~----e  108 (165)
                      +.+|.|....||++...    .+ .++||+-.......     ...++...|...|+.+..  | .+.+++.+-.    .
T Consensus         5 ~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~-----~~~~~~~~E~~~l~~l~h--~-~i~~~~~~~~~~~~~   76 (273)
T cd05074           5 RMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSS-----SDIEEFLREAACMKEFDH--P-NVIKLIGVSLRSRAK   76 (273)
T ss_pred             hcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCCh-----HHHHHHHHHHHHHhcCCC--C-CcceEEEEEccCCCC
Confidence            45788888999999753    34 79999876544321     224566778888776642  4 4455554321    1


Q ss_pred             C----ceEEEecCCCCchHHHHHHHc----CCC-------CHHHHHHHHHHHHHHHhcc
Q 045250          109 M----SLIGMRYLEPPHIILRKGLIA----GIK-------YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~----~~~vMEdl~~~~~~lr~~l~~----g~~-------~~~~a~~iG~~La~~h~~t  152 (165)
                      .    ..+++||..  ..+|...+..    ++.       .-.++.+|...|+-+|...
T Consensus        77 ~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~  133 (273)
T cd05074          77 GRLPIPMVILPFMK--HGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN  133 (273)
T ss_pred             CcccceEEEEecCC--CCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            1    257888887  2356555432    111       1357788888899888765

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=89.98  E-value=2.3  Score=33.94  Aligned_cols=105  Identities=14%  Similarity=0.045  Sum_probs=63.7

Q ss_pred             eEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC
Q 045250           37 IKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDR  107 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~  107 (165)
                      ++++|.|....||++...      ++ .++||.......      .--.++...|...++.+.  .|. +.+++.  .+.
T Consensus        10 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~e~~~~~~l~--h~~-iv~~~~~~~~~   80 (283)
T cd05091          10 MEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE------GPLREEFKHEAMMRSRLQ--HPN-IVCLLGVVTKE   80 (283)
T ss_pred             HHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC------HHHHHHHHHHHHHHhcCC--CCC-cCeEEEEEcCC
Confidence            456788888899999753      12 688887652211      111244555666665543  243 333433  345


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCC-----------------CC----HHHHHHHHHHHHHHHhcc
Q 045250          108 TMSLIGMRYLEPPHIILRKGLIAGI-----------------KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 e~~~~vMEdl~~~~~~lr~~l~~g~-----------------~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +...++||+.+  ...+.+.+....                 ..    -.++.++...|.-+|...
T Consensus        81 ~~~~~~~e~~~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g  144 (283)
T cd05091          81 QPLSMIFSYCS--HSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH  144 (283)
T ss_pred             CceEEEEEcCC--CCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC
Confidence            66778999987  457777764211                 11    146778899999998654

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=89.85  E-value=6  Score=34.38  Aligned_cols=109  Identities=18%  Similarity=0.117  Sum_probs=71.4

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCC-CChHHHHHHHHHHHHhhccCCC--CCceEEEEcCCCc
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWP-MTKERAYFEALALKEHGKLCPD--HVPEVYHFDRTMS  110 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~-l~~~R~~~E~~~L~~~~~~~p~--~vP~v~~~D~e~~  110 (165)
                      -...+|.|+..-|+..... +| .+.+| -..+-.+  ..+. .-..+...|..+|+.+..+ |.  ..-+++ ..+...
T Consensus        21 ~~~~lG~GsfgkV~~a~~~~t~~~vAiK-ii~~~~~--~~~~~~~~~~i~rEi~~~~~~~~H-pnI~~l~ev~-~t~~~~   95 (370)
T KOG0583|consen   21 LGRTLGSGSFGKVKLAKHRLTGEKVAIK-IIDRKKV--SSKSQKLDELIKREISILRRLRSH-PNIIRLLEVF-ATPTKI   95 (370)
T ss_pred             eeeeecCCCCeeEEEeeeccCCCeEEEE-Eechhcc--cccccccchhhHHHHHHHHHhccC-CCEeEEEEEE-ecCCeE
Confidence            5678999999999999765 45 78888 3333222  2232 3445666788888888855 32  123333 344558


Q ss_pred             eEEEecCCCCchHHHHHHHc-CCCCH----HHHHHHHHHHHHHHhc
Q 045250          111 LIGMRYLEPPHIILRKGLIA-GIKYP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       111 ~~vMEdl~~~~~~lr~~l~~-g~~~~----~~a~~iG~~La~~h~~  151 (165)
                      .+||||+. + ..|-+.+.+ |..-+    .+-.||-..++-.|..
T Consensus        96 ~ivmEy~~-g-GdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~  139 (370)
T KOG0583|consen   96 YIVMEYCS-G-GDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSR  139 (370)
T ss_pred             EEEEEecC-C-ccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhC
Confidence            89999999 4 466666666 55444    3557778888888877

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=89.61  E-value=1.6  Score=35.83  Aligned_cols=104  Identities=19%  Similarity=0.155  Sum_probs=64.6

Q ss_pred             eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHH-------HHHHHHHhhcc------CC---CCC
Q 045250           36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYF-------EALALKEHGKL------CP---DHV   99 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~-------E~~~L~~~~~~------~p---~~v   99 (165)
                      .++.+.+..-|+|.+|..+.+.+|+|.-++..+..        +|...       -.+.+.....+      .+   -.+
T Consensus        35 ~~kv~k~~~r~~ValIei~~~kyIlK~pr~~~~r~--------er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~  106 (229)
T PF06176_consen   35 IIKVFKNTKRNYVALIEIDGKKYILKEPREENRRP--------ERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLA  106 (229)
T ss_pred             EEEeecCCCccEEEEEEECCcEEEEeccchhhhhH--------HHHHHHHhccHHHHHHHHHHHHHHHcCccccccceee
Confidence            55788899999999999988899999999877542        22222       11112211111      11   123


Q ss_pred             ceEEEEc-CCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250          100 PEVYHFD-RTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       100 P~v~~~D-~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      .+--.+. ...++++|||+.  +..+-+..   .+.+.+++.|...+-++|...
T Consensus       107 ~ekk~~~~~~~~~ll~EYIe--G~~l~d~~---~i~e~~~~ki~~~ikqlH~~G  155 (229)
T PF06176_consen  107 AEKKIFRYTSSYVLLMEYIE--GVELNDIE---DIDEDLAEKIVEAIKQLHKHG  155 (229)
T ss_pred             eeeeeccceeEEEEEEEEec--Ceecccch---hcCHHHHHHHHHHHHHHHHcC
Confidence            3333332 355678999998  44443321   134567888889999999764

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=89.24  E-value=3.6  Score=34.47  Aligned_cols=83  Identities=16%  Similarity=0.034  Sum_probs=48.5

Q ss_pred             eEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC
Q 045250           37 IKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDR  107 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~  107 (165)
                      .+.||.|....||++...      ++ .+++|+-..-..   .   -...+...|...++.+... |. +.+++.  +++
T Consensus        12 ~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~---~---~~~~~~~~E~~~~~~l~~h-~n-iv~~~~~~~~~   83 (337)
T cd05054          12 GKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT---A---SEYKALMTELKILIHIGHH-LN-VVNLLGACTKP   83 (337)
T ss_pred             hcccccCcCceEEeccccccccccccceeeeeeccCCCC---H---HHHHHHHHHHHHHHhhccC-cc-hhheeeeEecC
Confidence            467899999999998632      22 688886542111   0   1123455677777766432 33 333332  233


Q ss_pred             C-CceEEEecCCCCchHHHHHHH
Q 045250          108 T-MSLIGMRYLEPPHIILRKGLI  129 (165)
Q Consensus       108 e-~~~~vMEdl~~~~~~lr~~l~  129 (165)
                      + ...++|||++  +.+|.+.+.
T Consensus        84 ~~~~~~v~ey~~--~~~L~~~i~  104 (337)
T cd05054          84 GGPLMVIVEYCK--FGNLSNYLR  104 (337)
T ss_pred             CCCEEEEEecCC--CCCHHHHHH
Confidence            3 4567899998  346666554

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=88.69  E-value=2.8  Score=37.52  Aligned_cols=108  Identities=18%  Similarity=0.079  Sum_probs=61.4

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCc---eEEEEcC---
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVP---EVYHFDR---  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP---~v~~~D~---  107 (165)
                      -.+.||.|....||++... +| .+.||.-...-.     -.-...|...|..+|....-  |..+.   .....|+   
T Consensus        36 i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~-----~~~~~~~~~~Ei~~l~~~~h--~~iv~~~~~~~~~~~~~~  108 (496)
T PTZ00283         36 ISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM-----SEADKNRAQAEVCCLLNCDF--FSIVKCHEDFAKKDPRNP  108 (496)
T ss_pred             EEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC-----CHHHHHHHHHHHHHHhcCCC--CcEEEeecceecccccCc
Confidence            4568999999999999865 45 799996432110     01122345556556654321  11111   0111111   


Q ss_pred             C---CceEEEecCCCCchHHHHHHHcC----CCCH-----HHHHHHHHHHHHHHhcc
Q 045250          108 T---MSLIGMRYLEPPHIILRKGLIAG----IKYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 e---~~~~vMEdl~~~~~~lr~~l~~g----~~~~-----~~a~~iG~~La~~h~~t  152 (165)
                      +   ...+||||++  ...|++.+.+.    ..++     .++.++...|.-+|...
T Consensus       109 ~~~~~i~lV~Ey~~--~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~  163 (496)
T PTZ00283        109 ENVLMIALVLDYAN--AGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH  163 (496)
T ss_pred             ccceEEEEEEeCCC--CCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            1   1358999998  34777766542    2222     36778888999998643

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=88.55  E-value=4.6  Score=30.50  Aligned_cols=94  Identities=19%  Similarity=0.086  Sum_probs=61.4

Q ss_pred             EEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceEEEecCCCCch
Q 045250           47 FVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLIGMRYLEPPHI  122 (165)
Q Consensus        47 ~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~vMEdl~~~~~  122 (165)
                      -||++.... | .+++|........   .+   .++...|.+.++.+..  |. ++.++  ..+.....++||+.+  ..
T Consensus         4 ~v~~~~~~~~~~~~~~k~~~~~~~~---~~---~~~~~~e~~~~~~l~~--~~-i~~~~~~~~~~~~~~l~~e~~~--~~   72 (244)
T smart00220        4 KVYLARDKKTGKLVAIKVIKKEKIK---KK---RERILREISILKKLKH--PN-IVRLYDVFEDEDKLYLVMEYCD--GG   72 (244)
T ss_pred             EEEEEEECCCCcEEEEEEecccccc---cH---HHHHHHHHHHHHhCCC--Cc-HHHHHhheeeCCEEEEEEeCCC--CC
Confidence            578888764 5 8999986644321   11   5788888888877722  32 33333  234478899999998  34


Q ss_pred             HHHHHHHcCC-CC----HHHHHHHHHHHHHHHhc
Q 045250          123 ILRKGLIAGI-KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       123 ~lr~~l~~g~-~~----~~~a~~iG~~La~~h~~  151 (165)
                      .|.+.+.... ..    -.++.++...|+.+|..
T Consensus        73 ~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~  106 (244)
T smart00220       73 DLFDLLKKRGRLSEDEARFYARQILSALEYLHSN  106 (244)
T ss_pred             CHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHc
Confidence            7777665543 11    25777788888888875

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG2686 consensus Choline kinase [Cell wall/membrane/envelope biogenesis]

Probab=87.54  E-value=2.1  Score=37.53  Aligned_cols=110  Identities=14%  Similarity=0.184  Sum_probs=77.0

Q ss_pred             CCCcceeEeccCCceeEEEEEEeCCC-eEEEEecCccc-cccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC
Q 045250           31 KFDDLTIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYV-RCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRT  108 (165)
Q Consensus        31 ~~~~~~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~-r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e  108 (165)
                      ..+..+++.++||..|.+|.++.+.. ..|=++-.+++ |+-|+.-.  ..-...|..++..++..  ..=|++|.+-++
T Consensus        39 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~k~LlRiyg~~~~--~~~~~~Esv~fa~lSer--~lGPkL~G~F~~  114 (366)
T KOG2686|consen   39 INEEQRLEVIPGGGSNLLFVVTSSASTTPIKDEPRKVLLRIYGQGVD--FSQRETESVMFAILSER--GLGPKLYGFFSG  114 (366)
T ss_pred             hhhhheeeeccCCCcceEEEEecCcccCCcccccceeEEEEecCCcc--HHHhhhHHHHHHHHhhc--CCCcceeeecCC
Confidence            34567999999999999999998876 45545555554 77655332  45556677778777774  456999998877


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhc
Q 045250          109 MSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       109 ~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~  151 (165)
                      ..   ||..=+ .+.|..   +--..|++...||.-|+..|..
T Consensus       115 GR---~Eefip-SRtL~~---~~i~~p~~S~~Ia~~~~~~H~~  150 (366)
T KOG2686|consen  115 GR---FEEFIP-SRTLTL---ADIRDPEISKRIAAKLAEYHGI  150 (366)
T ss_pred             cc---Hhhhcc-ccccch---HhhcchhHHHHHHHHHHHhcCC
Confidence            65   443332 555544   3335688999999999999953

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=87.18  E-value=15  Score=29.89  Aligned_cols=101  Identities=17%  Similarity=0.105  Sum_probs=60.9

Q ss_pred             EeccCCceeEEEEEEeC---CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-c--CCCc
Q 045250           38 KEVGDGNLNFVYIVVGT---SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-D--RTMS  110 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~---~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D--~e~~  110 (165)
                      ..+|.|....||++...   ++ .+.+|+-...      ..   ......|.++|+.+..  |..+.-.-.| +  ....
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~------~~---~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~   75 (317)
T cd07868           7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT------GI---SMSACREIALLRELKH--PNVISLQKVFLSHADRKV   75 (317)
T ss_pred             cccccCCCeEEEEEEEccCCCCceEEEEEECCC------CC---cHHHHHHHHHHHhcCC--CCCcceeeeEecCCCcEE
Confidence            46899999999999854   23 6888875421      11   1345678888887753  4333322222 1  2335


Q ss_pred             eEEEecCCCCchHHHHHHHcC---------CCC-----HHHHHHHHHHHHHHHhcc
Q 045250          111 LIGMRYLEPPHIILRKGLIAG---------IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdl~~~~~~lr~~l~~g---------~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      .++||+++.   .+.+.+...         ...     -.++.+|...|.-+|...
T Consensus        76 ~lv~e~~~~---~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~  128 (317)
T cd07868          76 WLLFDYAEH---DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW  128 (317)
T ss_pred             EEEEeccCC---CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            688999873   343433221         111     246788888999888653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=86.83  E-value=7  Score=35.80  Aligned_cols=114  Identities=21%  Similarity=0.198  Sum_probs=71.5

Q ss_pred             CcceeEeccCCceeEEEEEEeCCC-eEEEEecCccccc-------------------cCCCCCCChHHH-----------
Q 045250           33 DDLTIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRC-------------------IGESWPMTKERA-----------   81 (165)
Q Consensus        33 ~~~~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~-------------------~~~~~~l~~~R~-----------   81 (165)
                      +..+-+|++.+.+--|++....+| .|+||-=+|=++.                   ....|.+++.-.           
T Consensus       126 ~eF~~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~E  205 (517)
T COG0661         126 SEFEPEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREE  205 (517)
T ss_pred             HHcCCCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHH
Confidence            355678999999999999999988 9999999987642                   111133443322           


Q ss_pred             ---HHHHHHHHHhhccC---C-CCCceEEEEcCCCceEEEecCCCCchHHHHH-HH-cCCCCHHHHHHHHHHHHH
Q 045250           82 ---YFEALALKEHGKLC---P-DHVPEVYHFDRTMSLIGMRYLEPPHIILRKG-LI-AGIKYPLLAEHMSEFMAK  147 (165)
Q Consensus        82 ---~~E~~~L~~~~~~~---p-~~vP~v~~~D~e~~~~vMEdl~~~~~~lr~~-l~-~g~~~~~~a~~iG~~La~  147 (165)
                         +.|+..+..+++..   | -.||+||--=-...+++||++.+ .+.-... +. +|.....+|+.+.+..-+
T Consensus       206 lDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~G-i~i~d~~~l~~~g~d~k~ia~~~~~~f~~  279 (517)
T COG0661         206 LDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDG-IKISDIAALKSAGIDRKELAELLVRAFLR  279 (517)
T ss_pred             hCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCC-EecccHHHHHhcCCCHHHHHHHHHHHHHH
Confidence               34555666666543   2 26999995445789999999983 3332222 22 233323555555444333

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=86.35  E-value=4.3  Score=37.20  Aligned_cols=99  Identities=16%  Similarity=0.159  Sum_probs=57.9

Q ss_pred             eeEeccCCceeEEEEEEeC-C----C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCC---------Cc
Q 045250           36 TIKEVGDGNLNFVYIVVGT-S----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDH---------VP  100 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~---------vP  100 (165)
                      -...||.|..--||++.+. +    + .++||+...+..              .|......+...++..         .+
T Consensus       136 l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--------------~e~~~~e~l~~~~~~~~~~~~~~~~~~  201 (566)
T PLN03225        136 LGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--------------VEIWMNERVRRACPNSCADFVYGFLEP  201 (566)
T ss_pred             EeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--------------hHHHHHHHHHhhchhhHHHHHHhhhcc
Confidence            4577999999999999875 3    5 899998654321              1111111111111111         11


Q ss_pred             eEEEEcCCCceEEEecCCCCchHHHHHHHcCCC-------------------------CHHHHHHHHHHHHHHHhc
Q 045250          101 EVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIK-------------------------YPLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       101 ~v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~-------------------------~~~~a~~iG~~La~~h~~  151 (165)
                      .. .-+.....+||||.+  ...|.+.+..+..                         ...++.+|...|.-+|..
T Consensus       202 ~~-~~~~~~~~LV~ey~~--~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~  274 (566)
T PLN03225        202 VS-SKKEDEYWLVWRYEG--ESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST  274 (566)
T ss_pred             cc-cccCCceEEEEEecC--CCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC
Confidence            11 235567889999998  3466665544321                         014677788888888865

>KOG4720 consensus Ethanolamine kinase [Lipid transport and metabolism]

Probab=85.79  E-value=3  Score=36.23  Aligned_cols=105  Identities=15%  Similarity=0.199  Sum_probs=66.9

Q ss_pred             CCCcceeEeccCCceeEEEEEEeCCC---eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC
Q 045250           31 KFDDLTIKEVGDGNLNFVYIVVGTSG---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR  107 (165)
Q Consensus        31 ~~~~~~v~~l~~Gn~N~v~rV~~~~g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~  107 (165)
                      +..+++.+..+||-.|-++-+.....   +|+|.-   |.-  ..+--++.++-.+-...|   ++  -+.+|++|  -.
T Consensus        80 ~~~~v~~~~fs~gitNkL~~~~vg~~~e~~v~vrv---yg~--~te~vIdre~Ev~afk~L---~a--~G~ap~Ly--~t  147 (391)
T KOG4720|consen   80 KPPEVTFKRFSDGITNKLFSCYVGENMEDHVLVRV---YGH--NTELVIDRENEVIAFKLL---AA--YGFAPKLY--GT  147 (391)
T ss_pred             CccceeeeeeccchhHHHHHhhcccccceeEEEEe---ccC--CCceeeccHHHHHHHHHH---HH--cCcChhhh--he
Confidence            45678888999999998876654432   444322   211  123345555544433334   33  35678888  44


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250          108 TMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      =++-+|.||+.  ++.|--   +....|.+...|++-||++|.--
T Consensus       148 F~NGLvyefi~--g~tL~p---~~mr~pki~~lIAr~mak~H~~~  187 (391)
T KOG4720|consen  148 FNNGLVYEFIQ--GKTLEP---EHMREPKIFRLIARRMAKIHSIV  187 (391)
T ss_pred             ecCceEEeeec--CcccCh---hhccChHHHHHHHHHHHHhheec
Confidence            57889999998  445533   23346889999999999999753

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=85.65  E-value=11  Score=31.94  Aligned_cols=105  Identities=16%  Similarity=0.247  Sum_probs=73.1

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--CCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD--RTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--~e~~~  111 (165)
                      -++.||.|..--+|....- +| .|-||-....++.  |       -..+|+.+.+.++.-  .-.|.+++|-  .+-++
T Consensus        19 lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--p-------qL~yEskvY~iL~~g--~GiP~i~~y~~e~~ynv   87 (341)
T KOG1163|consen   19 LVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--P-------QLLYESKVYRILQGG--VGIPHIRHYGTEKDYNV   87 (341)
T ss_pred             EEEeecCCchhheeeeeeccCCceEEEEeecccCCC--c-------chhHHHHHHHHhccC--CCCchhhhhccccccce
Confidence            6889999999999988664 56 8999999888875  3       346788888777652  2357787776  56789


Q ss_pred             EEEecCCCCchHHHHHHHcCCC---CHHHHHHHHHHHHHHHhc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIK---YPLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~---~~~~a~~iG~~La~~h~~  151 (165)
                      +||+-|+|....|-......-.   ---+|.|+-.-+--+|..
T Consensus        88 lVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r  130 (341)
T KOG1163|consen   88 LVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLR  130 (341)
T ss_pred             eeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhh
Confidence            9999999865565554443221   113566665555555554

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=85.22  E-value=13  Score=33.45  Aligned_cols=113  Identities=17%  Similarity=0.098  Sum_probs=67.2

Q ss_pred             ceeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE-EEEcCCCce
Q 045250           35 LTIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV-YHFDRTMSL  111 (165)
Q Consensus        35 ~~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v-~~~D~e~~~  111 (165)
                      +-.+.+|-|-.-.|-.+... +| .|-||+--..--.-...-.....+...|.++|+.++-  |..|--- ++-+++..-
T Consensus       175 ii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~H--P~IV~~~d~f~~~ds~Y  252 (475)
T KOG0615|consen  175 IISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSH--PNIVRIKDFFEVPDSSY  252 (475)
T ss_pred             EeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCC--CCEEEEeeeeecCCceE
Confidence            45677888888877666554 56 7888875543211011113344556899999998866  4333222 233455669


Q ss_pred             EEEecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~  151 (165)
                      +||||++ ++ .|-+.+.+.+. .    ..+..|+-+.+--+|..
T Consensus       253 mVlE~v~-GG-eLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~  295 (475)
T KOG0615|consen  253 MVLEYVE-GG-ELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQ  295 (475)
T ss_pred             EEEEEec-Cc-cHHHHHHhccccccchhHHHHHHHHHHHHHHHHc
Confidence            9999999 44 55565555442 2    24556666666666654

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=85.06  E-value=9.5  Score=32.69  Aligned_cols=105  Identities=20%  Similarity=0.060  Sum_probs=72.9

Q ss_pred             eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCC--Cc
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-DRT--MS  110 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~e--~~  110 (165)
                      ..+-+|.|..-.||...+.+ | -.-||+..-. .    .|.  .+=...|..+|+.+.  +|..|+..-.+ ..+  .+
T Consensus        21 ~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~-~----~~~--~~~l~~Ei~iL~~l~--~p~IV~~~G~~~~~~~~~~   91 (313)
T KOG0198|consen   21 KGKLLGRGSFGSVYLATNKKTGELMAVKSVELE-D----SPT--SESLEREIRILSRLN--HPNIVQYYGSSSSRENDEY   91 (313)
T ss_pred             hhccccCccceEEEEEEecCCCcceeeeeeecc-c----chh--HHHHHHHHHHHHhCC--CCCEEeeCCccccccCeee
Confidence            66778999999999999875 5 7888887633 1    122  333567777888887  46655543321 223  48


Q ss_pred             eEEEecCCCCchHHHHHHHc-C-CCC----HHHHHHHHHHHHHHHhc
Q 045250          111 LIGMRYLEPPHIILRKGLIA-G-IKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       111 ~~vMEdl~~~~~~lr~~l~~-g-~~~----~~~a~~iG~~La~~h~~  151 (165)
                      -+.|||++  ..+|.+.+.. | ...    ...+++|.+-|+-+|..
T Consensus        92 ~i~mEy~~--~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~  136 (313)
T KOG0198|consen   92 NIFMEYAP--GGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSK  136 (313)
T ss_pred             EeeeeccC--CCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            89999999  4577777765 3 332    26889999999999944

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=84.68  E-value=0.92  Score=41.20  Aligned_cols=106  Identities=15%  Similarity=0.181  Sum_probs=71.7

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCC--CCceEEEEcCC-Cc
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPD--HVPEVYHFDRT-MS  110 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~--~vP~v~~~D~e-~~  110 (165)
                      .++++|||..--||+...- .| -|-||+..-....      ..--=+..|..+|+.+.+. |.  ..=+ ...|.+ .-
T Consensus        14 ~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s------~ee~~nLREvksL~kln~h-pniikL~E-vi~d~~~~L   85 (538)
T KOG0661|consen   14 VIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS------WEECMNLREVKSLRKLNPH-PNIIKLKE-VIRDNDRIL   85 (538)
T ss_pred             HHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc------HHHHHHHHHHHHHHhcCCC-CcchhhHH-HhhccCceE
Confidence            5678999999999999865 45 6777877655532      1223457788889888865 22  1222 234666 66


Q ss_pred             eEEEecCCCCchHHHHHHHcC-CCC-----HHHHHHHHHHHHHHHhcc
Q 045250          111 LIGMRYLEPPHIILRKGLIAG-IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdl~~~~~~lr~~l~~g-~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      -||||+..   .+|.+.+... +.|     -++..||-.-|+-+|.++
T Consensus        86 ~fVfE~Md---~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~G  130 (538)
T KOG0661|consen   86 YFVFEFMD---CNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHG  130 (538)
T ss_pred             eeeHHhhh---hhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcC
Confidence            79999997   4777655443 233     257778888888888765

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=84.60  E-value=6.4  Score=33.99  Aligned_cols=107  Identities=14%  Similarity=0.093  Sum_probs=72.3

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC---
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRT---  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e---  108 (165)
                      .++.+|+|.--.||++... +| -|.+|..+-....  ++   .+.=+..|..+|+.+..-++  +-.++.+  +.+   
T Consensus        15 ~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~--EG---~P~taiREisllk~L~~~~~--iv~L~dv~~~~~~~~   87 (323)
T KOG0594|consen   15 KVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE--EG---VPSTAIREISLLKRLSHANH--IVRLHDVIHTSNNHR   87 (323)
T ss_pred             HHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc--cC---CCchhhHHHHHHHHhCCCcc--eEEEEeeeeeccccc
Confidence            5677999999999999875 56 6777766544331  22   23446779999999988654  3223221  222   


Q ss_pred             ---CceEEEecCCCCchHHHHHHHcCC-----C----CHHHHHHHHHHHHHHHhcc
Q 045250          109 ---MSLIGMRYLEPPHIILRKGLIAGI-----K----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ---~~~~vMEdl~~~~~~lr~~l~~g~-----~----~~~~a~~iG~~La~~h~~t  152 (165)
                         .-.+|||++.   .+|++.+....     .    ...+..||-+.|+-.|.+.
T Consensus        88 ~~~~l~lvfe~~d---~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~  140 (323)
T KOG0594|consen   88 GIGKLYLVFEFLD---RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG  140 (323)
T ss_pred             ccceEEEEEEeec---ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence               3458999997   47888777643     1    2367788888888888764

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=83.89  E-value=18  Score=35.41  Aligned_cols=79  Identities=22%  Similarity=0.173  Sum_probs=55.0

Q ss_pred             CCCcce-eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--
Q 045250           31 KFDDLT-IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--  105 (165)
Q Consensus        31 ~~~~~~-v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--  105 (165)
                      +...++ .+.++-||--+||++... +| -..||--.|-.-..        +-...|+++|+.....  -++++.|++  
T Consensus        17 p~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~d--------eEiE~eynil~~~~~h--pnv~~fyg~~~   86 (953)
T KOG0587|consen   17 PADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEE--------EEIELEYNMLKKYSHH--PNVATFYGAFI   86 (953)
T ss_pred             CCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcccc--------HHHHHHHHHHHhccCC--CCcceEEEEEE
Confidence            444564 566788999999999976 34 56667666555431        5788899999887654  245555544  


Q ss_pred             -----cCCCceEEEecCCC
Q 045250          106 -----DRTMSLIGMRYLEP  119 (165)
Q Consensus       106 -----D~e~~~~vMEdl~~  119 (165)
                           ..+.--||||+|+.
T Consensus        87 k~~~~~~DqLWLVMEfC~g  105 (953)
T KOG0587|consen   87 KKDPGNGDQLWLVMEFCGG  105 (953)
T ss_pred             EecCCCCCeEEEEeeccCC
Confidence                 34777899999995

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=83.78  E-value=15  Score=33.43  Aligned_cols=115  Identities=13%  Similarity=0.118  Sum_probs=61.4

Q ss_pred             eeEeccCCceeEEEEEEe-----------------CCC-eEEEEecCccccccCCCC-------CCChHHHHHHHHHHHH
Q 045250           36 TIKEVGDGNLNFVYIVVG-----------------TSG-SFVIKQALPYVRCIGESW-------PMTKERAYFEALALKE   90 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~-----------------~~g-svIvKqa~p~~r~~~~~~-------~l~~~R~~~E~~~L~~   90 (165)
                      ....||.|..-.||+...                 .++ .|+||+-...-.....++       .-..+....|...+..
T Consensus       149 i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~l~~  228 (507)
T PLN03224        149 LRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYMCAK  228 (507)
T ss_pred             EeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHHHHH
Confidence            557789999999999753                 123 688887432110000001       0122344456666655


Q ss_pred             hhcc--CCCCCceEEEE----------cCCCceEEEecCCCCchHHHHHHH---------------cCCCC---------
Q 045250           91 HGKL--CPDHVPEVYHF----------DRTMSLIGMRYLEPPHIILRKGLI---------------AGIKY---------  134 (165)
Q Consensus        91 ~~~~--~p~~vP~v~~~----------D~e~~~~vMEdl~~~~~~lr~~l~---------------~g~~~---------  134 (165)
                      +..-  ....+.+.+.|          +.....+||||.+.  .+|.+.|.               .|...         
T Consensus       229 l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~--gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~  306 (507)
T PLN03224        229 IKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESD--ATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKR  306 (507)
T ss_pred             hhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCC--CcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccC
Confidence            5431  22223333322          34567899999983  34444332               22211         


Q ss_pred             -----HHHHHHHHHHHHHHHhcc
Q 045250          135 -----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       135 -----~~~a~~iG~~La~~h~~t  152 (165)
                           -.++.++...|..+|...
T Consensus       307 ~~~~~~~i~~ql~~aL~~lH~~~  329 (507)
T PLN03224        307 DINVIKGVMRQVLTGLRKLHRIG  329 (507)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCC
Confidence                 135677788888888764

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=82.59  E-value=9.4  Score=34.66  Aligned_cols=104  Identities=13%  Similarity=-0.007  Sum_probs=74.2

Q ss_pred             EeccCCceeEEEEEEeCCC------eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCC
Q 045250           38 KEVGDGNLNFVYIVVGTSG------SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTM  109 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~~g------svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~  109 (165)
                      ..||.|+.--||+.....+      .|-||+...--.    .-......+..||++|+.+.-   .+|-++|+  .|.+-
T Consensus       163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~----~~~~~~~e~m~EArvMr~l~H---~NVVr~yGVa~~~~P  235 (474)
T KOG0194|consen  163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSE----LTKEQIKEFMKEARVMRQLNH---PNVVRFYGVAVLEEP  235 (474)
T ss_pred             ceeecccccEEEEEEEEecCCceeeeeEEEeeccccc----ccHHHHHHHHHHHHHHHhCCC---CCEEEEEEEEcCCCc
Confidence            6899999999999987632      267888774111    112445688899999988543   45677777  78899


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCC--C----HHHHHHHHHHHHHHHh
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGIK--Y----PLLAEHMSEFMAKTLF  150 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~~--~----~~~a~~iG~~La~~h~  150 (165)
                      ..+|||.++  +..|.+.|.+...  .    -.++-+.+.=|.-+|.
T Consensus       236 l~ivmEl~~--gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~  280 (474)
T KOG0194|consen  236 LMLVMELCN--GGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHS  280 (474)
T ss_pred             cEEEEEecC--CCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHH
Confidence            999999998  3489999988552  1    1456666666666665

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	165
2pyw_A	420	Structure Of A. Thaliana 5-Methylthioribose Kinase		4e-77
2olc_A	397	Crystal Structure Of 5-Methylthioribose Kinase In C		7e-25

>pdb|2PYW|A Chain A, Structure Of A. Thaliana 5-Methylthioribose Kinase In Complex With Adp And Mtr Length = 420

Iteration: 1
 Score =  283 bits (723), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 131/166 (78%), Positives = 150/166 (90%), Gaps = 2/166 (1%)
Query: 1   MAFTEFRPLDDKSLLEYIKATPSLSSKIG--NKFDDLTIKEVGDGNLNFVYIVVGTSGSF 58
           M+F EF PL++KSL++YIK+TP+LSSKIG     DDL IKEVGDGNLNFV+IVVG+SGS 
Sbjct: 1   MSFEEFTPLNEKSLVDYIKSTPALSSKIGADKSDDDLVIKEVGDGNLNFVFIVVGSSGSL 60
Query: 59  VIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLE 118
           VIKQALPY+RCIGESWPMTKERAYFEA  L++HG L PDHVPEVYHFDRTM+LIGMRYLE
Sbjct: 61  VIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFDRTMALIGMRYLE 120
Query: 119 PPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKR 164
           PPHIILRKGLIAGI+YP LA+HMS++MAKTLF+TSLLY  TTEH+R
Sbjct: 121 PPHIILRKGLIAGIEYPFLADHMSDYMAKTLFFTSLLYHDTTEHRR 166

>pdb|2OLC|A Chain A, Crystal Structure Of 5-Methylthioribose Kinase In Complex With Adp-2ho Length = 397

Iteration: 1
 Score =  109 bits (272), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 56/122 (45%), Positives = 80/122 (65%), Gaps = 5/122 (4%)
Query: 35  LTIKEVGDGNLNFVYIVVGT--SGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHG 92
           LT +E+GDGNLN+V+ +       + +IKQA+PY + +GESWP+T +RA  E+ AL   G
Sbjct: 33  LTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQG 92
Query: 93  KLCPDHVPEVYHFDRTMSLIGMRYLEPPHI-ILRKGLIAGIKYPLLAEHMSEFMAKTLFY 151
           +  P  VP V++ D  M++  M  L   H+ I RKGLI G  YP L++H+ EF+ KTLFY
Sbjct: 93  EHVPHLVPRVFYSDTEMAVTVMEDL--SHLKIARKGLIEGENYPHLSQHIGEFLGKTLFY 150
Query: 152 TS 153
           +S
Sbjct: 151 SS 152

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	165
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	5e-53
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	2e-45
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	7e-05

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} Length = 420

 Score =  172 bits (436), Expect = 5e-53
 Identities = 131/166 (78%), Positives = 150/166 (90%), Gaps = 2/166 (1%)

Query: 1   MAFTEFRPLDDKSLLEYIKATPSLSSKIG--NKFDDLTIKEVGDGNLNFVYIVVGTSGSF 58
           M+F EF PL++KSL++YIK+TP+LSSKIG     DDL IKEVGDGNLNFV+IVVG+SGS 
Sbjct: 1   MSFEEFTPLNEKSLVDYIKSTPALSSKIGADKSDDDLVIKEVGDGNLNFVFIVVGSSGSL 60

Query: 59  VIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLE 118
           VIKQALPY+RCIGESWPMTKERAYFEA  L++HG L PDHVPEVYHFDRTM+LIGMRYLE
Sbjct: 61  VIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFDRTMALIGMRYLE 120

Query: 119 PPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKR 164
           PPHIILRKGLIAGI+YP LA+HMS++MAKTLF+TSLLY  TTEH+R
Sbjct: 121 PPHIILRKGLIAGIEYPFLADHMSDYMAKTLFFTSLLYHDTTEHRR 166

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* Length = 397

 Score =  152 bits (383), Expect = 2e-45
 Identities = 60/165 (36%), Positives = 88/165 (53%), Gaps = 8/165 (4%)

Query: 3   FTEFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSG--SFVI 60
              +  L++ S +          SK       LT +E+GDGNLN+V+ +       + +I
Sbjct: 6   TPLYETLNESSAVALAVKLGLFPSK-----STLTCQEIGDGNLNYVFHIYDQEHDRALII 60

Query: 61  KQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPP 120
           KQA+PY + +GESWP+T +RA  E+ AL   G+  P  VP V++ D  M++  M  L   
Sbjct: 61  KQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDTEMAVTVMEDL-SH 119

Query: 121 HIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKRN 165
             I RKGLI G  YP L++H+ EF+ KTLFY+S         K+ 
Sbjct: 120 LKIARKGLIEGENYPHLSQHIGEFLGKTLFYSSDYALEPKVKKQL 164

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} Length = 312

 Score = 40.9 bits (95), Expect = 7e-05
 Identities = 13/85 (15%), Positives = 29/85 (34%), Gaps = 10/85 (11%)

Query: 24  LSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYF 83
           L+ + G  +     +++  G +N ++++     +  +K                +     
Sbjct: 28  LAEQFGAYYFIKHKEKLYSGEMNEIWLINDEVQTVFVKIN----------ERSYRSMFRA 77

Query: 84  EALALKEHGKLCPDHVPEVYHFDRT 108
           EA  L    K    +VP VY    +
Sbjct: 78  EADQLALLAKTNSINVPLVYGIGNS 102

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	165
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	99.93
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	99.93
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	99.24
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	99.2
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	99.18
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	99.11
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.1
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	98.99
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.96
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.93
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.89
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.88
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.86
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.85
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	98.81
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.79
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.72
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	98.7
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	98.62
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	98.56
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	98.55
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	98.51
3mes_A	424	Choline kinase; malaria, structural genomics, stru	98.5
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	98.48
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	98.43
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	98.3
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	98.0
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	97.76
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	97.6
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	97.46
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	97.46
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	97.39
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	97.36
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	97.34
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	97.34
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	97.34
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	97.25
3bhy_A	283	Death-associated protein kinase 3; death associate	97.23
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	97.23
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	97.17
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	97.17
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	97.17
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	97.16
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	97.15
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	97.13
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	97.12
3uqc_A	286	Probable conserved transmembrane protein; structur	97.12
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	97.12
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	97.11
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	97.1
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	97.07
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	97.06
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	97.02
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	97.02
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	97.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	96.99
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	96.98
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	96.97
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	96.95
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	96.95
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	96.95
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	96.94
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	96.93
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	96.93
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	96.93
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	96.92
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	96.92
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	96.91
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	96.91
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	96.9
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	96.89
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	96.88
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	96.87
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	96.86
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	96.86
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	96.86
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	96.83
3niz_A	311	Rhodanese family protein; structural genomics, str	96.82
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	96.82
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	96.81
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	96.8
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	96.8
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	96.8
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	96.79
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	96.79
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	96.79
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	96.79
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	96.77
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	96.76
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	96.76
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	96.75
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	96.75
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	96.75
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	96.74
4aoj_A	329	High affinity nerve growth factor receptor; transf	96.73
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	96.72
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	96.71
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	96.71
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	96.7
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	96.68
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	96.68
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	96.68
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	96.67
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	96.65
3q4u_A	301	Activin receptor type-1; structural genomics conso	96.65
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	96.64
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	96.62
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	96.62
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	96.61
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	96.61
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	96.61
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	96.61
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	96.6
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	96.59
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	96.58
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	96.58
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	96.57
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	96.57
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	96.56
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	96.54
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	96.54
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	96.52
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	96.52
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	96.52
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	96.51
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	96.51
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	96.51
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	96.5
3o0g_A	292	Cell division protein kinase 5; kinase activator c	96.5
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	96.5
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	96.5
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	96.49
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	96.48
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	96.48
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	96.47
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	96.46
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	96.45
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	96.45
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	96.44
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	96.44
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	96.43
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	96.43
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	96.43
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	96.43
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	96.43
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	96.43
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	96.43
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	96.42
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	96.42
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	96.42
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	96.42
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	96.42
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	96.39
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	96.38
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	96.37
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	96.37
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	96.36
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	96.35
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	96.35
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	96.34
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	96.32
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	96.32
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	96.32
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	96.3
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	96.3
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	96.3
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	96.29
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	96.29
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	96.29
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	96.28
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	96.28
3soc_A	322	Activin receptor type-2A; structural genomics cons	96.28
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	96.27
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	96.25
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	96.25
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	96.24
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	96.23
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	96.21
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	96.21
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	96.21
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	96.21
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	96.21
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	96.2
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	96.2
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	96.2
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	96.19
3an0_A	340	Dual specificity mitogen-activated protein kinase;	96.18
3fme_A	290	Dual specificity mitogen-activated protein kinase;	96.18
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	96.16
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	96.16
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	96.16
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	96.15
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	96.15
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	96.15
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	96.14
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	96.12
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	96.12
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	96.11
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	96.09
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	96.07
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	96.07
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	96.06
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	96.05
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	96.05
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	96.05
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	96.04
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	96.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	95.97
3ork_A	311	Serine/threonine protein kinase; structural genomi	95.97
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	95.94
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	95.92
2a19_B	284	Interferon-induced, double-stranded RNA-activated	95.91
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	95.9
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	95.9
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	95.87
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	95.86
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	95.83
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	95.82
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	95.81
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	95.81
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	95.79
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	95.78
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	95.78
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	95.76
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	95.74
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	95.74
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	95.7
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	95.68
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	95.68
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	95.66
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	95.64
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	95.63
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	95.62
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	95.61
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	95.55
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	95.54
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	95.53
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	95.53
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	95.52
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	95.47
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	95.46
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	95.45
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	95.41
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	95.4
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	95.38
3rp9_A	458	Mitogen-activated protein kinase; structural genom	95.37
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	95.37
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	95.36
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	95.35
2dyl_A	318	Dual specificity mitogen-activated protein kinase	95.34
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	95.33
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	95.28
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	95.25
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	95.24
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	95.2
3pls_A	298	Macrophage-stimulating protein receptor; protein k	95.19
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	95.19
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	95.17
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	95.1
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	95.02
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	94.94
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	94.82
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	94.73
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	94.71
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	94.64
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	94.61
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	94.57
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	94.55
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	94.52
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	94.46
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	94.36
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	93.96
3aln_A	327	Dual specificity mitogen-activated protein kinase;	93.9
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	93.75
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	93.64
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	93.44
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	93.33
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	93.26
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	92.59
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	92.51
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	92.26

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=99.93  E-value=1.9e-25  Score=189.42  Aligned_cols=152  Identities=38%  Similarity=0.627  Sum_probs=127.0

Q ss_pred             CCCccccCHhhHHHHHHhCCCcccccCCCCCcceeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHH
Q 045250            3 FTEFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKER   80 (165)
Q Consensus         3 ~~~~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R   80 (165)
                      .+.|..|++++|.+||+..+.+.     +.+.++++++|+|++|.||||+.. ++ ++||||+.|+.|+.+++|++..+|
T Consensus         6 ~~~~~~l~~~~v~~~l~~~~~~~-----~~~~~~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r   80 (397)
T 2olc_A            6 TPLYETLNESSAVALAVKLGLFP-----SKSTLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDR   80 (397)
T ss_dssp             CCCCCCCCHHHHHHHHHHTTC----------CCEEEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTH
T ss_pred             CcccccCCHHHHHHHHHhcCcCC-----CCCceEEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHH
Confidence            35899999999999999776442     344589999999999999999764 33 999999999998446899999999


Q ss_pred             HHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccCch
Q 045250           81 AYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTT  160 (165)
Q Consensus        81 ~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~~~  160 (165)
                      ...|+++|+.+++.+|..+|++|++|++..++||||++ ++..|+..+.+|...+..++++|++||++|+.|+++.++..
T Consensus        81 ~~~E~~~L~~l~~~~~~~vP~~~~~d~~~~~lvmE~l~-g~~~~~~~l~~~~~~~~~~~~l~~~La~lH~~~~~~~~~~~  159 (397)
T 2olc_A           81 ARIESSALIRQGEHVPHLVPRVFYSDTEMAVTVMEDLS-HLKIARKGLIEGENYPHLSQHIGEFLGKTLFYSSDYALEPK  159 (397)
T ss_dssp             HHHHHHHHHHHHTTCGGGSCCEEEEETTTTEEEECCCT-TSEEHHHHHHTTCCCTTHHHHHHHHHHHHHHHTSTTTSCHH
T ss_pred             HHHHHHHHHHhhhhCCCCcCeEEEEcCCccEEEEEeCC-CcchHHHHHhcCCcCHHHHHHHHHHHHHHhhhcccccCChH
Confidence            99999999999998889999999999999999999998 68889999998888889999999999999999999888765

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=99.93  E-value=1e-25  Score=193.18  Aligned_cols=154  Identities=78%  Similarity=1.319  Sum_probs=133.7

Q ss_pred             CCCCCccccCHhhHHHHHH---hCC-CcccccCCCC---CcceeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCC
Q 045250            1 MAFTEFRPLDDKSLLEYIK---ATP-SLSSKIGNKF---DDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGES   73 (165)
Q Consensus         1 ~~~~~~~~l~~~~v~~Yl~---~~~-~~~~~~~~~~---~~~~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~   73 (165)
                      |+++.|+.|++++|.+|++   ..+ .+    + ..   +.++++++++|+.|.||||...++++||||++|+.++.+++
T Consensus         1 ~~~~~~~~l~~~~~~~yl~~~~~~~~~~----~-~~~~~~~~~i~~l~~G~~n~vyrv~~~~~~~vvK~~~p~~~~~~~~   75 (420)
T 2pyw_A            1 MSFEEFTPLNEKSLVDYIKSTPALSSKI----G-ADKSDDDLVIKEVGDGNLNFVFIVVGSSGSLVIKQALPYIRCIGES   75 (420)
T ss_dssp             --CCSCCCCCTTHHHHHHHTCHHHHHHH----T-TTTCCCCCEEEECCCSSSCEEEEEECSSCEEEEEECCSBCTTTCTT
T ss_pred             CCccccccCChhhHHHHHhchhhhhhhc----C-CcccccceEEEEccCCCcEEEEEEEcCCceEEEEECchhhcccCcc
Confidence            7899999999999999999   332 22    1 33   56899999999999999998755599999999999944688


Q ss_pred             CCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecC-CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250           74 WPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYL-EPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus        74 ~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vMEdl-~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      |+++.+|..+|++++.......|..+|++|++|++...+||||+ + ++..|+..+.+|...+..++++|++||++|+.+
T Consensus        76 ~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~~~~~~lv~e~l~~-g~~~l~~~l~~~~~~~~~~~~lg~~La~lH~~~  154 (420)
T 2pyw_A           76 WPMTKERAYFEATTLRKHGNLSPDHVPEVYHFDRTMALIGMRYLEP-PHIILRKGLIAGIEYPFLADHMSDYMAKTLFFT  154 (420)
T ss_dssp             SBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEETTTTEEEECCCCT-TCEEHHHHHHHTCCCTTHHHHHHHHHHHHHHTT
T ss_pred             cccchhHHHHHHHHHHHHHhhCCCCCCeEEEECCCccEEEEeecCC-cchhHHHHHhcCCCCHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999988778899999999999999999999 8 578999999988888889999999999999999


Q ss_pred             cccccCch
Q 045250          153 SLLYRTTT  160 (165)
Q Consensus       153 sd~~l~~~  160 (165)
                      +++.++.+
T Consensus       155 ~~~~~~~~  162 (420)
T 2pyw_A          155 SLLYHDTT  162 (420)
T ss_dssp             STTTSCHH
T ss_pred             cccccChh
Confidence            98877543

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=99.24  E-value=4.8e-11  Score=98.30  Aligned_cols=122  Identities=8%  Similarity=0.001  Sum_probs=86.9

Q ss_pred             HhhHHHHHHhCCCcccccCCCCCcceeEeccCCceeE-EEEEEeC-CCeEEEEecCccccccCCCCCCChHHHHHHHHHH
Q 045250           11 DKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNF-VYIVVGT-SGSFVIKQALPYVRCIGESWPMTKERAYFEALAL   88 (165)
Q Consensus        11 ~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~-v~rV~~~-~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L   88 (165)
                      .+.+..||...++         ...++++++||.+|- +||++.. ++++|+|++.|...          ++...|++++
T Consensus         6 ~~~l~~~l~~~~~---------~~~~~~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~----------~~~~~e~~~l   66 (333)
T 3csv_A            6 EDEIRDFLATHGY---------ADWNRTPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG----------GDTQPFVDLA   66 (333)
T ss_dssp             HHHHHHHHHHTTC---------TTCEECC--------CCEEEECTTCCEEEEEECCTTTT----------CCSHHHHHHH
T ss_pred             HHHHHHHHHhcCC---------CCceeeECCCCCCCceEEEEEcCCCCeEEEEECCCCCC----------ccccHHHHHH
Confidence            3568889987642         346899999999997 7799875 44999999887421          4566799999


Q ss_pred             HHhhccCCCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCC-HHHHHHHHHHHHHHHhcccc
Q 045250           89 KEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKY-PLLAEHMSEFMAKTLFYTSL  154 (165)
Q Consensus        89 ~~~~~~~p~~vP~v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~-~~~a~~iG~~La~~h~~tsd  154 (165)
                      +.+++. +..||+++.+|.++..++|||++ + ..+.+.+...... +..++++|+.||++|..+..
T Consensus        67 ~~L~~~-g~~vP~v~~~d~~~g~ll~e~l~-~-~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~  130 (333)
T 3csv_A           67 QYLRNL-DISAPEIYAEEHARGLLLIEDLG-D-ALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTP  130 (333)
T ss_dssp             HHHHHT-TCBCCCEEEEETTTTEEEECCCC-S-CBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCC
T ss_pred             HHHHhC-CCCCCceeeecCCCCEEEEeeCC-C-cchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCc
Confidence            999875 66799999999988899999998 3 4555555433222 57889999999999998765

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=99.20  E-value=8.6e-11  Score=98.11  Aligned_cols=127  Identities=14%  Similarity=0.012  Sum_probs=99.4

Q ss_pred             CccccCHhhHHHHHHhCCCcccccCCCCCcceeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHH
Q 045250            5 EFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFE   84 (165)
Q Consensus         5 ~~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E   84 (165)
                      -|+....+.+..+|.+.-      +.+..-.++++++||.+|-+|+|++++++++||...+-          ...+...|
T Consensus        15 ~~~~~~~~~l~~~L~~~l------g~~~~i~~~~~l~gG~~n~~y~v~~~~~~~vlK~~~~~----------~~~~~~~E   78 (312)
T 3jr1_A           15 LYFQGMWKSISQVLAEQF------GAYYFIKHKEKLYSGEMNEIWLINDEVQTVFVKINERS----------YRSMFRAE   78 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHH------SSCCCCCEEEEECCSSSSEEEEEESSSCEEEEEEEEGG----------GHHHHHHH
T ss_pred             hhhhccHHHHHHHHHHHh------CCCcceeeeEEeCCccceeeeEEEECCCeEEEEeCCcc----------cHHHHHHH
Confidence            467777888889988641      21234568999999999999999987669999987642          24678899


Q ss_pred             HHHHHHhhccCCCCCceEEEEcC--CCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccc--ccccC
Q 045250           85 ALALKEHGKLCPDHVPEVYHFDR--TMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTS--LLYRT  158 (165)
Q Consensus        85 ~~~L~~~~~~~p~~vP~v~~~D~--e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ts--d~~l~  158 (165)
                      +++|+.+++..+..||+++.++.  ....+|||+++. . .+         .+..++++|+.||++|..+.  .|+.+
T Consensus        79 ~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G-~-~~---------~~~~~~~lG~~LA~LH~~~~~~~fG~~  145 (312)
T 3jr1_A           79 ADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK-S-KN---------KQSSFTIFAEKIAQLHQIQGPDKYGLD  145 (312)
T ss_dssp             HHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC-C-CC---------CTTHHHHHHHHHHHHHHCCCCSSBBCS
T ss_pred             HHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC-C-CC---------CchhHHHHHHHHHHHHcCCCCCCCCCC
Confidence            99999999877889999998864  568899999984 2 21         13478999999999999875  56544

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=99.18  E-value=3e-10  Score=91.97  Aligned_cols=100  Identities=20%  Similarity=0.206  Sum_probs=81.5

Q ss_pred             ceeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEE
Q 045250           35 LTIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIG  113 (165)
Q Consensus        35 ~~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~v  113 (165)
                      .+++++|+|..|.||||++.+| +++||...+-..       ........|++.|+.+++..+..||+++.+|.  ..+|
T Consensus        18 ~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~-------~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~~--~~lv   88 (288)
T 3f7w_A           18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAP-------ALDGLFRAEALGLDWLGRSFGSPVPQVAGWDD--RTLA   88 (288)
T ss_dssp             EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCC-------CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEET--TEEE
T ss_pred             EEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCc-------chhhHHHHHHHHHHHHHhhCCCCcceEEeccC--ceEE
Confidence            4899999999999999999988 899998764321       22345678999999999888899999999875  5789


Q ss_pred             EecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccc
Q 045250          114 MRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSL  154 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd  154 (165)
                      ||++.. .          ...+..++++|+.||++|..+.+
T Consensus        89 ~e~l~~-~----------~~~~~~~~~lg~~La~lH~~~~~  118 (288)
T 3f7w_A           89 MEWVDE-R----------PPTPEAAERFGHQLAAMHLAGAE  118 (288)
T ss_dssp             EECCCC-C----------CCCHHHHHHHHHHHHHHHHTCCS
T ss_pred             EEeecc-c----------CCChHHHHHHHHHHHhhhhcccc
Confidence            999973 2          23456788999999999998765

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.10  E-value=4.7e-10  Score=93.25  Aligned_cols=131  Identities=11%  Similarity=0.164  Sum_probs=92.4

Q ss_pred             cccCHhhHHHHHHhCCCcccccCCCCCcceeEeccCCceeEEEEEEeCCCeEEEEecC--ccccccCCCCCCChHHHHHH
Q 045250            7 RPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQAL--PYVRCIGESWPMTKERAYFE   84 (165)
Q Consensus         7 ~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~--p~~r~~~~~~~l~~~R~~~E   84 (165)
                      ..|+.+.+..||.++..      ...+.++++++++|.+|.||+|+..++++|+|...  +-...      -+..+...|
T Consensus        19 ~~ld~~~l~~~l~~~~~------~~~~~~~~~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~~~------~~~~~~~~E   86 (359)
T 3dxp_A           19 QRFDTEALEAWMRQHVE------GFAGPLSVEQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSKLL------PSAHAIERE   86 (359)
T ss_dssp             -CCCHHHHHHHHHHHST------TCCCCCEEEECCC-CCSCEEEEECSSCEEEEECCCC----------------CHHHH
T ss_pred             cCCCHHHHHHHHHHhCC------CCCCCceEEEcCCcccceEEEEEECCceEEEEeCCCCCCCCC------CcHHHHHHH
Confidence            35788999999997521      12456799999999999999999887799999886  43211      123577889


Q ss_pred             HHHHHHhhccCCCCCceEEEEcCCC-----ceEEEecCCCCchHHHHHHHcCC---CCHHHHHHHHHHHHHHHhcc
Q 045250           85 ALALKEHGKLCPDHVPEVYHFDRTM-----SLIGMRYLEPPHIILRKGLIAGI---KYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus        85 ~~~L~~~~~~~p~~vP~v~~~D~e~-----~~~vMEdl~~~~~~lr~~l~~g~---~~~~~a~~iG~~La~~h~~t  152 (165)
                      +++|+.+.+ .+..||+++.++.+.     ..+|||++++  ..+.+....+-   ....++.++|+.||++|..+
T Consensus        87 ~~~l~~L~~-~~vpvP~~~~~~~~~~~~g~~~~vme~v~G--~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~  159 (359)
T 3dxp_A           87 YRVMDALAG-TDVPVAKMYALCEDESVIGRAFYIMEFVSG--RVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVD  159 (359)
T ss_dssp             HHHHHHHTT-SSSCCCCEEEEECCTTTTSSCEEEEECCCC--BCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHhhc-CCCCCCcEEEECCCCCccCCeEEEEEecCC--eecCCCccccCCHHHHHHHHHHHHHHHHHHhCCC
Confidence            999999988 355799999998877     5699999983  33322111111   11357899999999999865

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=98.99  E-value=4.2e-09  Score=85.82  Aligned_cols=129  Identities=10%  Similarity=0.041  Sum_probs=91.5

Q ss_pred             CCccccCHhhHHHHHHhCCCcccccCCCCCcceeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHH
Q 045250            4 TEFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYF   83 (165)
Q Consensus         4 ~~~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~   83 (165)
                      +-|..++++.+.++|..-+        -.+..+++++++|..|.+|+|+..+|++|+|...+.         .+.++...
T Consensus         2 ~v~~~~~~~~l~~~l~~~~--------~~~~~~~~~i~~G~~n~~~~v~~~~g~~vlk~~~~~---------~~~~~l~~   64 (322)
T 2ppq_A            2 AVYTDITEDELRNFLTQYD--------VGSLTSYKGIAEGVENSNFLLHTTKDPLILTLYEKR---------VEKNDLPF   64 (322)
T ss_dssp             ---CCCCHHHHHHHHTTBC--------CCCEEEEEEECC---EEEEEEEESSCCEEEEEECC------------CCHHHH
T ss_pred             CccccCCHHHHHHHHHhCC--------CCcceEeeccCCCcccceEEEEeCCccEEEEEeCCC---------CCHHHHHH
Confidence            3688999999999997532        122358999999999999999988889999998763         12357778


Q ss_pred             HHHHHHHhhccCCCCCceEEEEcC--------CCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccccc
Q 045250           84 EALALKEHGKLCPDHVPEVYHFDR--------TMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLL  155 (165)
Q Consensus        84 E~~~L~~~~~~~p~~vP~v~~~D~--------e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~  155 (165)
                      |.++|+.+++. .-.||+++..+.        ....++||++++ . .+.      ...+..++++|+.||++|..+.+|
T Consensus        65 e~~~l~~L~~~-g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l~G-~-~~~------~~~~~~~~~~g~~La~lH~~~~~~  135 (322)
T 2ppq_A           65 FLGLMQHLAAK-GLSCPLPLPRKDGELLGELSGRPAALISFLEG-M-WLR------KPEAKHCREVGKALAAMHLASEGF  135 (322)
T ss_dssp             HHHHHHHHHHT-TCCCCCBCCBTTCCSCEEETTEEEEEEECCCC-B-CCS------SCCHHHHHHHHHHHHHHHHHTTTC
T ss_pred             HHHHHHHHHHC-CCCCCcccCCCCCCEEEEECCEEEEEEEeCCC-c-CCC------CCCHHHHHHHHHHHHHHHHHhccC
Confidence            99999998874 334777775432        345789999983 2 221      124788999999999999998877


Q ss_pred             ccC
Q 045250          156 YRT  158 (165)
Q Consensus       156 ~l~  158 (165)
                      ..+
T Consensus       136 ~~~  138 (322)
T 2ppq_A          136 EIK  138 (322)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            654

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.96  E-value=7.8e-10  Score=91.54  Aligned_cols=132  Identities=14%  Similarity=0.086  Sum_probs=90.3

Q ss_pred             HhhHHHHHHhCCCcccccCCCC-CcceeEec-cCCceeEEEEEEeC-------CC-eEEEEecCccccccCCCCCCChHH
Q 045250           11 DKSLLEYIKATPSLSSKIGNKF-DDLTIKEV-GDGNLNFVYIVVGT-------SG-SFVIKQALPYVRCIGESWPMTKER   80 (165)
Q Consensus        11 ~~~v~~Yl~~~~~~~~~~~~~~-~~~~v~~l-~~Gn~N~v~rV~~~-------~g-svIvKqa~p~~r~~~~~~~l~~~R   80 (165)
                      ++.+..||.++..     +... +-..++++ ++|.+|.+|+|+..       ++ ++|+|...+-...  +  ..+..+
T Consensus         3 ~~~l~~~l~~~~~-----~~~~~~v~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~--~--~~~~~~   73 (357)
T 3ats_A            3 PAVISRWLSSVLP-----GGAAPEVTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDV--P--VFPTYR   73 (357)
T ss_dssp             HHHHHHHHHHHSC-----TTCCCEEEEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGC--C--SSSCCC
T ss_pred             HHHHHHHHHHhcC-----CcCCCceEEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCcc--c--cCchhH
Confidence            4678889987521     0011 12367888 99999999999876       24 8999987653310  0  112367


Q ss_pred             HHHHHHHHHHhhccCCCCCceEEEEcCCCc-----eEEEecCCCCchHHHHHH----HcC---CCC----HHHHHHHHHH
Q 045250           81 AYFEALALKEHGKLCPDHVPEVYHFDRTMS-----LIGMRYLEPPHIILRKGL----IAG---IKY----PLLAEHMSEF  144 (165)
Q Consensus        81 ~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~-----~~vMEdl~~~~~~lr~~l----~~g---~~~----~~~a~~iG~~  144 (165)
                      ...|+++|+.+++..+..||+++.++.+..     .+|||++++  ..+.+.+    .++   ...    ..+++++|+.
T Consensus        74 ~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g~~~~v~e~l~G--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  151 (357)
T 3ats_A           74 LDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEG--VVPPDVMPYTFGDNWFADAPAERQRQLQDATVAA  151 (357)
T ss_dssp             HHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTSSCEEEEECCCC--BCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcCCCCCCcEEEEccCCCccCCceEEEEecCC--CChhhcCcccccccccCCCCHHHHHHHHHHHHHH
Confidence            889999999998875668999999987663     589999983  3333211    000   111    3578999999


Q ss_pred             HHHHHhccc
Q 045250          145 MAKTLFYTS  153 (165)
Q Consensus       145 La~~h~~ts  153 (165)
                      |+++|..+.
T Consensus       152 La~LH~~~~  160 (357)
T 3ats_A          152 LATLHSIPN  160 (357)
T ss_dssp             HHHHTTCSS
T ss_pred             HHHHhCCCC
Confidence            999998764

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.93  E-value=8.2e-09  Score=80.42  Aligned_cols=104  Identities=10%  Similarity=-0.069  Sum_probs=79.7

Q ss_pred             CcceeEecc-CCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC--
Q 045250           33 DDLTIKEVG-DGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRT--  108 (165)
Q Consensus        33 ~~~~v~~l~-~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e--  108 (165)
                      ....+++++ ||..|.||||...+| ++|||...+-          ...+...|+++|+.++.. +..||+++.++.+  
T Consensus        20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~----------~~~~~~~E~~~l~~l~~~-~~~vP~~~~~~~~~~   88 (264)
T 1nd4_A           20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG----------ALNELQDEAARLSWLATT-GVPCAAVLDVVTEAG   88 (264)
T ss_dssp             TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC----------TTSCHHHHHHHHHHHHTT-TCCBCCEEEEEECSS
T ss_pred             CCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc----------cchhhhHHHHHHHHHHhC-CCCCCeEEEeccCCC
Confidence            356788886 778899999998777 7999996532          124678899999999876 5669999988765  


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250          109 MSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      ...+|||+++  +..+.   ........++.++|++|+++|..+
T Consensus        89 ~~~~v~e~i~--G~~l~---~~~~~~~~~~~~l~~~l~~lh~~~  127 (264)
T 1nd4_A           89 RDWLLLGEVP--GQDLL---SSHLAPAEKVSIMADAMRRLHTLD  127 (264)
T ss_dssp             CEEEEEECCS--SEETT---TSCCCHHHHHHHHHHHHHHHTTSC
T ss_pred             CCEEEEEecC--CcccC---cCcCCHhHHHHHHHHHHHHHhCCC
Confidence            4589999998  34552   122222478999999999999876

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.89  E-value=1.3e-08  Score=80.73  Aligned_cols=106  Identities=12%  Similarity=0.098  Sum_probs=80.7

Q ss_pred             cceeEeccCCcee-EEEEEEeCCC--eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC
Q 045250           34 DLTIKEVGDGNLN-FVYIVVGTSG--SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRT  108 (165)
Q Consensus        34 ~~~v~~l~~Gn~N-~v~rV~~~~g--svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e  108 (165)
                      ..+.+.+++|.+| .|||+....+  +++||...+-.          ......|++.|+.++..+|  ||+++.+  |.+
T Consensus        26 g~~~~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~~----------~~~~~~E~~~l~~l~~~vP--VP~v~~~~~~~~   93 (272)
T 4gkh_A           26 GYRWARDNVGQSGATIYRLYGKPNAPELFLKHGKGSV----------ANDVTDEMVRLNWLTAFMP--LPTIKHFIRTPD   93 (272)
T ss_dssp             TCEEEEEECSSSSCEEEEEECCTTCCCEEEEEEETHH----------HHHHHHHHHHHHHHTTTSC--CCCEEEEEEETT
T ss_pred             CCeEEEccCCCcCCeEEEEEecCCCeEEEEEECCCCC----------HhHHHHHHHHHHHhccCCC--cCeEEEEEEECC
Confidence            4578889999998 6999998644  89999976542          3467789999999988666  8999887  566


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCC-CHHHHHHHHHHHHHHHhccc
Q 045250          109 MSLIGMRYLEPPHIILRKGLIAGIK-YPLLAEHMSEFMAKTLFYTS  153 (165)
Q Consensus       109 ~~~~vMEdl~~~~~~lr~~l~~g~~-~~~~a~~iG~~La~~h~~ts  153 (165)
                      ...+|||+++  +..+.+....... ...+++++|.+|+++|....
T Consensus        94 ~~~lvme~l~--G~~~~~~~~~~~~~~~~~~~~l~~~L~~Lh~~~~  137 (272)
T 4gkh_A           94 DAWLLTTAIP--GKTAFQVLEEYPDSGENIVDALAVFLRRLHSIPV  137 (272)
T ss_dssp             EEEEEEECCC--SEEHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCG
T ss_pred             eEEEEEEeeC--CccccccccCCHHHHHHHHHHHHHHHHHhcCCCc
Confidence            7789999998  3455554433322 34789999999999998653

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.86  E-value=2.1e-08  Score=82.32  Aligned_cols=125  Identities=16%  Similarity=0.203  Sum_probs=92.3

Q ss_pred             cCHhhHHHHHHhCCCcccccCCCCCcceeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHH
Q 045250            9 LDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALAL   88 (165)
Q Consensus         9 l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L   88 (165)
                      .+++.+..+|.+.  +     |..+..+++++++|..|.||+|   ++.+|||....-         -...+...|+++|
T Consensus         3 ~~~~~l~~~l~~~--~-----p~~~~~~v~~l~~G~~n~v~~v---g~~~VlR~~~~~---------~~~~~~~~E~~~L   63 (306)
T 3tdw_A            3 QNKLHYTTMIMTQ--F-----PDISIQSVESLGEGFRNYAILV---NGDWVFRFPKSQ---------QGADELNKEIQLL   63 (306)
T ss_dssp             -CHHHHHHHHHHH--C-----TTSCCSCEEEEEECSSEEEEEE---TTTEEEEEESSH---------HHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHH--C-----CCCCceeeeecCCCcceeEEEE---CCEEEEEecCCc---------hHHHHHHHHHHHH
Confidence            4677888898864  1     1334558999999999999999   358999984211         1236899999999


Q ss_pred             HHhhccCCCCCceEEEEcC---CCceEEEecCCCCchHHHHHHHcCC---CCHHHHHHHHHHHHHHHhcccc
Q 045250           89 KEHGKLCPDHVPEVYHFDR---TMSLIGMRYLEPPHIILRKGLIAGI---KYPLLAEHMSEFMAKTLFYTSL  154 (165)
Q Consensus        89 ~~~~~~~p~~vP~v~~~D~---e~~~~vMEdl~~~~~~lr~~l~~g~---~~~~~a~~iG~~La~~h~~tsd  154 (165)
                      +.++...|..||+++.+..   ....++||+++  +..+.......-   ....++.++|++|+++|....+
T Consensus        64 ~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~--G~~l~~~~~~~l~~~~~~~~~~~lg~~La~LH~~~~~  133 (306)
T 3tdw_A           64 PLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQ--GQILGEDGMAVLPDDAKDRLALQLAEFMNELSAFPVE  133 (306)
T ss_dssp             HHHTTTCSSBCCCEEEEEECTTSCEEEEEECCC--SEECHHHHHTTSCHHHHHHHHHHHHHHHHHHHHSCHH
T ss_pred             HHHHhcCCCCCCCeEeecccCCCceEEEEeccC--CeECchhhhhhCCHHHHHHHHHHHHHHHHHHhcCCcc
Confidence            9999877888999998874   23579999998  455555333211   1246899999999999998764

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.85  E-value=1.1e-08  Score=80.83  Aligned_cols=103  Identities=17%  Similarity=0.072  Sum_probs=77.1

Q ss_pred             EeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCC--ceEEEe
Q 045250           38 KEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTM--SLIGMR  115 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~--~~~vME  115 (165)
                      ...+||..|.|||+...++.++||...+-..       -+..+...|+++|+.+++  ...||+++.++.+.  ..+|||
T Consensus        20 ~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~-------~~~~~~~~E~~~l~~l~~--~~~vP~v~~~~~~~~~~~lv~e   90 (263)
T 3tm0_A           20 KDTEGMSPAKVYKLVGENENLYLKMTDSRYK-------GTTYDVEREKDMMLWLEG--KLPVPKVLHFERHDGWSNLLMS   90 (263)
T ss_dssp             ECCSCCSSSEEEEEECSSCEEEEEEECGGGT-------TSTTCHHHHHHHHHHHTT--TSCCCCEEEEEEETTEEEEEEE
T ss_pred             eeccCCCCCeEEEEECCCCcEEEEeCCcccC-------CCHHHHHHHHHHHHHHhc--CCCCCeEEEEEecCCceEEEEE
Confidence            3466777899999997766999999875432       123478899999999977  35699999887654  459999


Q ss_pred             cCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhc
Q 045250          116 YLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       116 dl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~  151 (165)
                      +++  +..+.+.+........++.++|..|+++|..
T Consensus        91 ~i~--G~~l~~~~~~~~~~~~~~~~l~~~l~~LH~~  124 (263)
T 3tm0_A           91 EAD--GVLCSEEYEDEQSPEKIIELYAECIRLFHSI  124 (263)
T ss_dssp             CCS--SEEHHHHCCTTTCHHHHHHHHHHHHHHHHHS
T ss_pred             ecC--CeehhhccCCcccHHHHHHHHHHHHHHHhCC
Confidence            998  4577665322222347899999999999983

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=98.81  E-value=3.4e-08  Score=80.56  Aligned_cols=125  Identities=12%  Similarity=0.057  Sum_probs=92.4

Q ss_pred             CccccCHhhHHHHHHhCCCcccccCCCCCcceeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHH
Q 045250            5 EFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYF   83 (165)
Q Consensus         5 ~~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~   83 (165)
                      .|..|+++.+.++|...|+-       . ..++++++ |..|.||+|...+| ++|||...|-.        .+.++...
T Consensus         7 ~~~~l~~~~i~~~l~~~g~~-------~-~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~--------~~~~~~~~   69 (328)
T 1zyl_A            7 TFQTLHPDTIMDALFEHGIR-------V-DSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER--------WTADQILE   69 (328)
T ss_dssp             CCCCCCHHHHHHHHHHTTCC-------C-CSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT--------SCHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHcCCC-------C-CceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC--------CCHHHHHH
Confidence            68999999999999876531       1 13567787 88999999998877 89999987532        14567888


Q ss_pred             HHHHHHHhhccCCCCCceEEEEcCC-------CceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccccc
Q 045250           84 EALALKEHGKLCPDHVPEVYHFDRT-------MSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLL  155 (165)
Q Consensus        84 E~~~L~~~~~~~p~~vP~v~~~D~e-------~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~  155 (165)
                      |.++++.+.+. .-.||+++..|.+       ....+||++++ . .+.      ...+..++++|+.||++|..+.++
T Consensus        70 E~~~~~~L~~~-g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G-~-~~~------~~~~~~~~~~g~~La~lH~~~~~~  139 (328)
T 1zyl_A           70 EHQFALQLVND-EVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG-R-QFE------ADNIDQMEAVGRYLGRMHQTGRKQ  139 (328)
T ss_dssp             HHHHHHHHHHT-TCSBCCCCCBTTBSCEEETTEEEEEEECCCC-E-ECC------SSCHHHHHHHHHHHHHHHHHHTSS
T ss_pred             HHHHHHHHHHc-CCeecceeecCCcEEEEECCEEEEEEEecCC-C-CCC------CCCHHHHHHHHHHHHHHHHhhccC
Confidence            99999998874 3347777766322       22469999983 2 221      134678899999999999988765

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.79  E-value=2e-08  Score=81.63  Aligned_cols=126  Identities=17%  Similarity=0.169  Sum_probs=91.6

Q ss_pred             ccCHhhHHHHHHhCCCcccccCCCCCcceeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHH
Q 045250            8 PLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALA   87 (165)
Q Consensus         8 ~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~   87 (165)
                      .++.+.+.++|++.-       ++....+++++++|..|.||+|.   +++|||...+-         -...+...|+++
T Consensus         3 ~~~~~~l~~~l~~~~-------p~~~~~~i~~~~~G~~n~v~~v~---~~~vlR~~~~~---------~~~~~~~~E~~~   63 (304)
T 3sg8_A            3 TYTFDQVEKAIEQLY-------PDFTINTIEISGEGNDCIAYEIN---RDFIFKFPKHS---------RGSTNLFNEVNI   63 (304)
T ss_dssp             CCCHHHHHHHHHHHC-------TTCCCCCCCEEEECSSEEEEEST---TSEEEEEESSH---------HHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHhC-------CCccceeeEecCCCCcceEEEEC---CEEEEEecCCc---------chHHHHHHHHHH
Confidence            578899999998631       12334578889999999999985   57999986532         123688999999


Q ss_pred             HHHhhccCCCCCceEEEEcCCCc-----eEEEecCCCCchHHHHHHHcCC---CCHHHHHHHHHHHHHHHhcccc
Q 045250           88 LKEHGKLCPDHVPEVYHFDRTMS-----LIGMRYLEPPHIILRKGLIAGI---KYPLLAEHMSEFMAKTLFYTSL  154 (165)
Q Consensus        88 L~~~~~~~p~~vP~v~~~D~e~~-----~~vMEdl~~~~~~lr~~l~~g~---~~~~~a~~iG~~La~~h~~tsd  154 (165)
                      |+.+....+..||+++.++....     -+|||+++  +..+.......-   ....++.++|.+|+++|..+..
T Consensus        64 l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~--G~~l~~~~~~~l~~~~~~~~~~~l~~~la~LH~~~~~  136 (304)
T 3sg8_A           64 LKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK--GVPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINIS  136 (304)
T ss_dssp             HHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC--CEECCHHHHHTSCHHHHHHHHHHHHHHHHHHHHSCCT
T ss_pred             HHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC--CeECCccccccCCHHHHHHHHHHHHHHHHHHHcCCCC
Confidence            99987766777999999865433     56799998  344443322211   1247899999999999986653

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=98.70  E-value=1.3e-07  Score=76.72  Aligned_cols=104  Identities=14%  Similarity=0.138  Sum_probs=75.2

Q ss_pred             CcceeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--------
Q 045250           33 DDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--------  104 (165)
Q Consensus        33 ~~~~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--------  104 (165)
                      ...++++++||..|.+|+|...+|++|||...+           +.++...|.++++.+.+. ...||+++.        
T Consensus        33 ~~~~~~~l~gG~~n~~~~v~~~~~~~vlk~~~~-----------~~~~~~~e~~~l~~L~~~-g~~vp~~~~~~~g~~~~  100 (346)
T 2q83_A           33 QAEKIDVIQGNQMALVWKVHTDSGAVCLKRIHR-----------PEKKALFSIFAQDYLAKK-GMNVPGILPNKKGSLYS  100 (346)
T ss_dssp             CCCEEEECC----CEEEEEEETTEEEEEEEECS-----------CHHHHHHHHHHHHHHHHH-TCSSCCBCCCTTSCSCE
T ss_pred             ceEEeeeccccccCcEEEEEeCCCCEEEEecCC-----------CHHHHHHHHHHHHHHHHc-CCCCCceeecCCCCEEE
Confidence            345889999999999999998877999998864           235677888999888764 335677665        


Q ss_pred             EcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccc
Q 045250          105 FDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLY  156 (165)
Q Consensus       105 ~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~  156 (165)
                      .+.+...++||++++  ..+.      ...+..+.++|+.||++|..+.++.
T Consensus       101 ~~~~~~~~l~~~i~G--~~~~------~~~~~~~~~~g~~La~lH~~~~~~~  144 (346)
T 2q83_A          101 KHGSFLFVVYDWIEG--RPFE------LTVKQDLEFIMKGLADFHTASVGYQ  144 (346)
T ss_dssp             EETTEEEEEEECCCC--BCCC------TTSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             EECCEEEEEEEeecC--ccCC------CCCHHHHHHHHHHHHHHHHhCCCCC
Confidence            355667899999983  2221      1246678999999999999887764

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=98.62  E-value=1.2e-07  Score=76.94  Aligned_cols=103  Identities=20%  Similarity=0.172  Sum_probs=74.6

Q ss_pred             eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEe
Q 045250           36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMR  115 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vME  115 (165)
                      .+++++||..|.+|+|    +++|||...+-..     -..+  | ..|+++|+.+++.  +..|+++++|++...++||
T Consensus        22 ~i~~l~gG~tN~~~~~----~~~vlR~~~~~~~-----~~~~--r-~~E~~~l~~l~~~--g~~P~~~~~~~~~~~~v~e   87 (301)
T 3dxq_A           22 GPLERLGGLTNLVFRA----GDLCLRIPGKGTE-----EYIN--R-ANEAVAAREAAKA--GVSPEVLHVDPATGVMVTR   87 (301)
T ss_dssp             SCEEEESCSSEEEEEE----TTEEEEEECC---------CCC--H-HHHHHHHHHHHHT--TSSCCEEEECTTTCCEEEE
T ss_pred             ceeEcCCcccccccee----eeEEEECCCCCcc-----ceeC--H-HHHHHHHHHHHHc--CCCCceEEEECCCCEEEEe
Confidence            3999999999999999    6899998875321     1122  3 3599999999885  2349999999999999999


Q ss_pred             cCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccccc
Q 045250          116 YLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLL  155 (165)
Q Consensus       116 dl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~  155 (165)
                      ++. ++..+...-...  .+...+++|+.|+++|.....+
T Consensus        88 ~i~-~g~~l~~~~~~~--~~~~~~~~~~~La~lH~~~~~~  124 (301)
T 3dxq_A           88 YIA-GAQTMSPEKFKT--RPGSPARAGEAFRKLHGSGAVF  124 (301)
T ss_dssp             CCT-TCEECCHHHHHH--STTHHHHHHHHHHHHHTSCCCC
T ss_pred             ecC-CCccCCHhhHhh--hHHHHHHHHHHHHHHhCCCCCC
Confidence            993 234443221111  2457899999999999976543

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=98.56  E-value=2.6e-07  Score=77.04  Aligned_cols=108  Identities=16%  Similarity=0.035  Sum_probs=75.0

Q ss_pred             CCCcceeEeccCCceeEEEEEEeCC----------CeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCc
Q 045250           31 KFDDLTIKEVGDGNLNFVYIVVGTS----------GSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVP  100 (165)
Q Consensus        31 ~~~~~~v~~l~~Gn~N~v~rV~~~~----------gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP  100 (165)
                      +.+.+++++++||..|.+|+|+..+          +++|+|...+-...     ..  +| ..|+++|+.+++. . .+|
T Consensus        32 ~~~~~~~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-----~~--~~-~~E~~~l~~L~~~-g-~~P  101 (369)
T 3c5i_A           32 TEDNLRVKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-----LY--NT-ISEFEVYKTMSKY-K-IAP  101 (369)
T ss_dssp             CGGGEEEEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-----TS--CH-HHHHHHHHHHHHT-T-SSC
T ss_pred             CcCceEEEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-----ee--cH-HHHHHHHHHHHhc-C-CCC
Confidence            3456899999999999999999764          48999987653321     11  22 6799999999875 2 399


Q ss_pred             eEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccccc
Q 045250          101 EVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLL  155 (165)
Q Consensus       101 ~v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~  155 (165)
                      +++..++  ..+|||+++ + ..+...-   -..+..++++|+.||++|..+.+.
T Consensus       102 ~~~~~~~--~~~v~e~i~-G-~~l~~~~---~~~~~~~~~~a~~La~lH~~~~~~  149 (369)
T 3c5i_A          102 QLLNTFN--GGRIEEWLY-G-DPLRIDD---LKNPTILIGIANVLGKFHTLSRKR  149 (369)
T ss_dssp             CEEEEET--TEEEEECCC-S-EECCGGG---GGCHHHHHHHHHHHHHHHTHHHHS
T ss_pred             ceEEecC--CcEEEEEec-C-CcCChhh---cCChHHHHHHHHHHHHHHcCcccc
Confidence            9998874  579999998 3 3332210   123678999999999999976543

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=98.55  E-value=3.2e-07  Score=80.13  Aligned_cols=107  Identities=15%  Similarity=0.095  Sum_probs=77.2

Q ss_pred             CCCcceeEeccCCceeEEEEEEeCC--CeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC
Q 045250           31 KFDDLTIKEVGDGNLNFVYIVVGTS--GSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRT  108 (165)
Q Consensus        31 ~~~~~~v~~l~~Gn~N~v~rV~~~~--gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e  108 (165)
                      +.+.+++++++||..|.+|+|+..+  +++|+|.-.+..       ..-.+| ..|+.+|+.+++.  ..+|++|++++ 
T Consensus       107 ~~~~~~i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-------~~~idR-~~E~~vl~~L~~~--gl~P~ll~~~~-  175 (458)
T 2qg7_A          107 EVDSLEFQIINGGITNILIKVKDMSKQAKYLIRLYGPKT-------DEIINR-EREKKISCILYNK--NIAKKIYVFFT-  175 (458)
T ss_dssp             GSTTEEEEEECC--CEEEEEEEETTTTEEEEEEEECC-C-------CSCSCH-HHHHHHHHHHTTS--SSBCCEEEEET-
T ss_pred             CccCeEEEEcCCCeEeEEEEEEECCCCceEEEEECCCCh-------hhhcCH-HHHHHHHHHHHhc--CCCCCEEEEeC-
Confidence            3567899999999999999999886  489998754422       112234 6899999999874  35799999985 


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccc
Q 045250          109 MSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSL  154 (165)
Q Consensus       109 ~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd  154 (165)
                       +..|||+++ + ..+..   ..-..+.++.+||+.||++|.....
T Consensus       176 -~G~v~e~I~-G-~~l~~---~~l~~~~~~~~ia~~La~LH~~~~~  215 (458)
T 2qg7_A          176 -NGRIEEFMD-G-YALSR---EDIKNPKFQKLIAKNLKLLHDIKLN  215 (458)
T ss_dssp             -TEEEEECCC-S-EECCT---TTTTSHHHHHHHHHHHHHHHTCCCC
T ss_pred             -CeEEEEeeC-C-ccCCh---hhcCCHHHHHHHHHHHHHHhcCCcc
Confidence             346999998 3 34432   1112478899999999999987644

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=98.51  E-value=3.8e-07  Score=75.90  Aligned_cols=121  Identities=12%  Similarity=0.087  Sum_probs=83.1

Q ss_pred             ccCHhhHHHHHHhCCCcccccCCCCCcceeEecc--CCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHH
Q 045250            8 PLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVG--DGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEA   85 (165)
Q Consensus         8 ~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~--~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~   85 (165)
                      .++++.+..+|.+.-      +.+  ..+++.+.  +|..|.||+|++.+|++|+|...+..             ...|.
T Consensus         5 ~l~~~~l~~~l~~~y------gl~--~~~~~~l~~G~g~~N~vy~v~~~~g~~vLK~~~~~~-------------~~~E~   63 (339)
T 3i1a_A            5 PIQAQQLIELLKVHY------GID--IHTAQFIQGGADTNAFAYQADSESKSYFIKLKYGYH-------------DEINL   63 (339)
T ss_dssp             SSCTTHHHHHHHHHH------CCC--CSEEEEETTTSCSSCEEEEEECSSCEEEEEEEECSS-------------CCHHH
T ss_pred             CCCHHHHHHHHHHHc------CCC--cceeEEeeccCccccceEEEEeCCCCEEEEEecCcc-------------chHHH
Confidence            578899999987641      112  23455554  55599999999888899999875421             14688


Q ss_pred             HHHHHhhccCCCC-CceEEEE--------cCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccc
Q 045250           86 LALKEHGKLCPDH-VPEVYHF--------DRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLY  156 (165)
Q Consensus        86 ~~L~~~~~~~p~~-vP~v~~~--------D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~  156 (165)
                      ++|+.+++. ... ||+++..        +......+||+++ +...+     .....+..+.++|+.||++|..+.++.
T Consensus        64 ~~l~~L~~~-g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~-G~~~~-----~~~~~~~~~~~lg~~La~LH~~~~~~~  136 (339)
T 3i1a_A           64 SIIRLLHDS-GIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH-APNGF-----TQNLTGKQWKQLGKVLRQIHETSVPIS  136 (339)
T ss_dssp             HHHHHHHHT-TCCSSCCCCCCTTSCSSEECSSEEEEEEECCC-CCBTT-----TSCCCHHHHHHHHHHHHHHHTCCCCHH
T ss_pred             HHHHHHHhc-CCcccccceecCCCCEEEEECCEEEEEEeccC-CCcCc-----ccCCCHHHHHHHHHHHHHHhCcCCCCC
Confidence            888888764 222 6666643        2344578999998 33221     123346778999999999999987653

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=98.50  E-value=1.2e-06  Score=75.83  Aligned_cols=126  Identities=10%  Similarity=0.048  Sum_probs=87.5

Q ss_pred             ccCHhhHHHHHHhC-CCcccccCCCCCcceeEeccCCceeEEEEEEeC---------CCeEEEEecCccccccCCCCCCC
Q 045250            8 PLDDKSLLEYIKAT-PSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGT---------SGSFVIKQALPYVRCIGESWPMT   77 (165)
Q Consensus         8 ~l~~~~v~~Yl~~~-~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~---------~gsvIvKqa~p~~r~~~~~~~l~   77 (165)
                      .++.+.+..+++.. |.+.   +.+.+.+++++++||-.|.+|+|+..         .+++||+...+..     +-.++
T Consensus        48 ~~d~~~l~~l~~~~~p~w~---~~~~~~~~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-----~~~id  119 (424)
T 3mes_A           48 ITDTEIIIGICRKNIPGWK---EINESYIEVKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-----GKFYD  119 (424)
T ss_dssp             --CHHHHHHHHHHHSTTCT---TCCGGGEEEEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC------CCCC
T ss_pred             CCCHHHHHHHHHHHcCccc---cCCCCceEEEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-----chhcC
Confidence            45677788888763 2221   11235789999999999999999987         2478888865432     12233


Q ss_pred             hHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccc
Q 045250           78 KERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTS  153 (165)
Q Consensus        78 ~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ts  153 (165)
                        | ..|+++|+.+++.  +.+|+++..++  ...|||+++ + .++...-+   ..|.++.++|+.||++|....
T Consensus       120 --R-~~E~~~l~~L~~~--gi~P~l~~~~~--~~~I~efI~-G-~~l~~~~l---~~~~~~~~ia~~La~LH~~~~  183 (424)
T 3mes_A          120 --S-KVELDVFRYLSNI--NIAPNIIADFP--EGRIEEFID-G-EPLTTKQL---QLTHICVEVAKNMGSLHIINS  183 (424)
T ss_dssp             --H-HHHHHHHHHHHHT--TSSCCEEEEET--TEEEEECCC-S-EECCTGGG---GSHHHHHHHHHHHHHHHTHHH
T ss_pred             --H-HHHHHHHHHHHhc--CCCCCEEEEcC--CCEEEEEeC-C-ccCChhhc---CCHHHHHHHHHHHHHHhcCch
Confidence              3 4699999999875  34899997664  588999998 3 34322111   246789999999999998654

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=98.48  E-value=4e-07  Score=77.77  Aligned_cols=107  Identities=12%  Similarity=0.111  Sum_probs=74.3

Q ss_pred             CCCcceeEeccCCceeEEEEEEeCC---------CeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCce
Q 045250           31 KFDDLTIKEVGDGNLNFVYIVVGTS---------GSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPE  101 (165)
Q Consensus        31 ~~~~~~v~~l~~Gn~N~v~rV~~~~---------gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~  101 (165)
                      +.+++++++++||..|.+|+|+..+         +++|||...+-.        -.......|+++|+.+++.  +.+|+
T Consensus        49 ~~~~l~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~--------~~~~~~~rE~~vl~~L~~~--gv~P~  118 (379)
T 3feg_A           49 QPEELRVYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL--------QGVDSLVLESVMFAILAER--SLGPQ  118 (379)
T ss_dssp             CGGGCCCEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-----------CCHHHHHHHHHHHHHHHHT--TSSCC
T ss_pred             CcCceEEEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc--------chHHHHHHHHHHHHHHHhc--CCCCe
Confidence            3578899999999999999999752         378988753321        1334556899999999885  33699


Q ss_pred             EEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccc
Q 045250          102 VYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSL  154 (165)
Q Consensus       102 v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd  154 (165)
                      ++.++++.  +|||+++  +.++...-   -..|.+.+++++.||++|...-.
T Consensus       119 ll~~~~~g--~v~e~i~--G~~l~~~~---l~~p~~~~~ia~~La~LH~~~~~  164 (379)
T 3feg_A          119 LYGVFPEG--RLEQYIP--SRPLKTQE---LREPVLSAAIATKMAQFHGMEMP  164 (379)
T ss_dssp             EEEEETTE--EEEECCS--EEECCGGG---GGCHHHHHHHHHHHHHHHTCCCS
T ss_pred             EEEEcCCc--cEEEEec--CccCChhH---hCCHHHHHHHHHHHHHHhCCCCC
Confidence            99999763  9999998  34543211   12478899999999999986543

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=98.43  E-value=7.6e-07  Score=76.72  Aligned_cols=104  Identities=13%  Similarity=0.130  Sum_probs=76.9

Q ss_pred             CCcceeEeccCCceeEEEEEEeCC---------CeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE
Q 045250           32 FDDLTIKEVGDGNLNFVYIVVGTS---------GSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV  102 (165)
Q Consensus        32 ~~~~~v~~l~~Gn~N~v~rV~~~~---------gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v  102 (165)
                      .+.+++++++||..|.+|+|+.++         +++|||.-.+      +   -..+....|+.+|+.+++.  ..+|++
T Consensus        73 ~~~~~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~------~---~~~~~li~E~~~l~~L~~~--g~~P~l  141 (429)
T 1nw1_A           73 LEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN------P---ETESHLVAESVIFTLLSER--HLGPKL  141 (429)
T ss_dssp             GGGEEEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS------C---CCHHHHHHHHHHHHHHHHT--TSSSCE
T ss_pred             ccceEEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCC------C---CcHHHHHHHHHHHHHHHhC--CCCCcE
Confidence            456899999999999999999752         3889887632      1   0125666799999998874  357999


Q ss_pred             EEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccc
Q 045250          103 YHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTS  153 (165)
Q Consensus       103 ~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ts  153 (165)
                      |+.+++  .+|||+++  +..+...-   -..+..+.+||+.||++|..+.
T Consensus       142 ~~~~~~--g~v~e~l~--G~~l~~~~---l~~~~~~~~ia~~La~LH~~~~  185 (429)
T 1nw1_A          142 YGIFSG--GRLEEYIP--SRPLSCHE---ISLAHMSTKIAKRVAKVHQLEV  185 (429)
T ss_dssp             EEEETT--EEEECCCC--EEECCTTG---GGSHHHHHHHHHHHHHHTTCCC
T ss_pred             EEEeCC--CEEEEEeC--CcccChhh---cCCHHHHHHHHHHHHHHhCCcc
Confidence            998874  49999997  33442211   1246789999999999998653

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=98.30  E-value=1.2e-06  Score=74.65  Aligned_cols=116  Identities=13%  Similarity=0.122  Sum_probs=70.0

Q ss_pred             CCCcceeEeccCCceeEEEEEEeCCCeEEEE-ecCcc-ccccCCCCCCChHHHH------------------HHHHHHHH
Q 045250           31 KFDDLTIKEVGDGNLNFVYIVVGTSGSFVIK-QALPY-VRCIGESWPMTKERAY------------------FEALALKE   90 (165)
Q Consensus        31 ~~~~~~v~~l~~Gn~N~v~rV~~~~gsvIvK-qa~p~-~r~~~~~~~l~~~R~~------------------~E~~~L~~   90 (165)
                      +.++++|++++||..|.+|+|+.++++.+++ ....+ +|+.|+...+...|..                  .|..+++.
T Consensus        51 ~~~~l~v~~lsGG~SN~~y~v~~~~~~~~~~~~~~~~llRi~g~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~e~~~~~~  130 (401)
T 3g15_A           51 REDEFHISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAI  130 (401)
T ss_dssp             CGGGCEEEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHH
T ss_pred             CcCCEEEEEeCCccccceEEEEECCCCcccccCCCeEEEEeCCCCccchhhhhHHHHHHHHHHhccCCCCCcchhHHHHH
Confidence            4568999999999999999999875422211 11122 2555555444444432                  23334444


Q ss_pred             hhccCCCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccccc
Q 045250           91 HGKLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLL  155 (165)
Q Consensus        91 ~~~~~p~~vP~v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~  155 (165)
                      ...  -+..|+++.+.+  +..++|++.  ...|..   +....+.+..+|++.||++|....++
T Consensus       131 ls~--~g~~p~l~~~f~--~g~i~e~i~--g~~l~~---~~~~~~~~~~~ia~~La~lH~~~~~~  186 (401)
T 3g15_A          131 LAE--RSLGPKLYGIFP--QGRLEQFIP--SRRLDT---EELSLPDISAEIAEKMATFHGMKMPF  186 (401)
T ss_dssp             HHH--TTSSCCEEEEET--TEEEEECCC--EEECCG---GGGGSHHHHHHHHHHHHHHHTCCCSS
T ss_pred             HHh--CCCCCEEEEEEC--CcEEEEecC--CCcCCh---hhhcCHHHHHHHHHHHHHHhcccccc
Confidence            333  356899998875  578899997  333322   11235788999999999999866544

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=97.76  E-value=8.8e-05  Score=58.97  Aligned_cols=110  Identities=14%  Similarity=0.074  Sum_probs=73.7

Q ss_pred             eEeccCCceeEEEEEEe-CCC-e--EEEEecCcccccc--------C-C--CCC------CChHHHHHHHHHHHHhhccC
Q 045250           37 IKEVGDGNLNFVYIVVG-TSG-S--FVIKQALPYVRCI--------G-E--SWP------MTKERAYFEALALKEHGKLC   95 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~-~~g-s--vIvKqa~p~~r~~--------~-~--~~~------l~~~R~~~E~~~L~~~~~~~   95 (165)
                      ...||.|....||++.+ .+| .  ++||.-.+-....        + +  .|.      ....+...|++.|+.+... 
T Consensus        52 ~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-  130 (258)
T 1zth_A           52 GGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEA-  130 (258)
T ss_dssp             EEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             CCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhC-
Confidence            46799999999999998 566 7  9999743221000        0 0  010      1123678889999888763 


Q ss_pred             CCCCceEEEEcCCCceEEEecCCCC---chHHHHHHHc--CCCCHHHHHHHHHHHHHHH
Q 045250           96 PDHVPEVYHFDRTMSLIGMRYLEPP---HIILRKGLIA--GIKYPLLAEHMSEFMAKTL  149 (165)
Q Consensus        96 p~~vP~v~~~D~e~~~~vMEdl~~~---~~~lr~~l~~--g~~~~~~a~~iG~~La~~h  149 (165)
                      ...+|.++.+  ..+.+||||++.+   ...|++....  ......++.+|...|..+|
T Consensus       131 ~i~~p~~~~~--~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH  187 (258)
T 1zth_A          131 GVSVPQPYTY--MKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLY  187 (258)
T ss_dssp             TCCCCCEEEE--ETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCeEEEc--CCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHH
Confidence            3468888866  4789999999521   2467665443  2233578999999999999

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=97.60  E-value=0.00036  Score=56.41  Aligned_cols=106  Identities=18%  Similarity=0.082  Sum_probs=74.9

Q ss_pred             EeccCCceeEEEEEEeCCC-eEEEEecCccccccC----------CCCC-CChHHHHHHHHHHHHhhccCCCCCceEEEE
Q 045250           38 KEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIG----------ESWP-MTKERAYFEALALKEHGKLCPDHVPEVYHF  105 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~----------~~~~-l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~  105 (165)
                      ..+|.|....||++.+.+| .++||.-..-.....          ..|. ....+...|+++|+.+. .  ..+|.++  
T Consensus        96 ~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-~--~~v~~~~--  170 (282)
T 1zar_A           96 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-G--LAVPKVY--  170 (282)
T ss_dssp             EEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-T--SSSCCEE--
T ss_pred             CEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-C--CCcCeEE--
Confidence            6899999999999998667 899998753221100          0111 24567789999999998 2  5677765  


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250          106 DRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      +.....+|||+++  +.+|.+ + .-.....++.+|...|..+|...
T Consensus       171 ~~~~~~lvmE~~~--g~~L~~-l-~~~~~~~i~~qi~~~l~~lH~~g  213 (282)
T 1zar_A          171 AWEGNAVLMELID--AKELYR-V-RVENPDEVLDMILEEVAKFYHRG  213 (282)
T ss_dssp             EEETTEEEEECCC--CEEGGG-C-CCSCHHHHHHHHHHHHHHHHHTT
T ss_pred             eccceEEEEEecC--CCcHHH-c-chhhHHHHHHHHHHHHHHHHHCC
Confidence            5678899999997  346666 3 22233479999999999999754

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=97.46  E-value=0.0016  Score=50.76  Aligned_cols=104  Identities=17%  Similarity=0.117  Sum_probs=75.5

Q ss_pred             eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~  112 (165)
                      -++.+|.|....||++...++ .++||.-..-        ....++...|.++|+.+.   ..++++++.+  +.....+
T Consensus        14 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--------~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~l   82 (269)
T 4hcu_A           14 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG--------AMSEEDFIEEAEVMMKLS---HPKLVQLYGVCLEQAPICL   82 (269)
T ss_dssp             EEEEEEECSSCEEEEEEETTTEEEEEEEECTT--------SBCHHHHHHHHHHHHTCC---CTTBCCEEEEECSSSSEEE
T ss_pred             eeheecCCCccEEEEEEecCCCeEEEEEeccc--------ccCHHHHHHHHHHHHhCC---CCCEeeEEEEEecCCceEE
Confidence            568899999999999998766 8999976532        134467888999998875   2345555554  4455689


Q ss_pred             EEecCCCCchHHHHHHHcCC--CCH----HHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGI--KYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~--~~~----~~a~~iG~~La~~h~~t  152 (165)
                      |||+++  +..|.+.+....  ...    .++.++...|+.+|...
T Consensus        83 v~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~  126 (269)
T 4hcu_A           83 VFEFME--HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC  126 (269)
T ss_dssp             EEECCT--TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeCC--CCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999998  457877776533  222    46788899999999764

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=97.46  E-value=0.00024  Score=62.72  Aligned_cols=109  Identities=17%  Similarity=0.044  Sum_probs=74.9

Q ss_pred             eEeccCCceeEEEEEEeCCCeEEEEecCccc-cccCCCCCCChHHHHHHHHHHHHhhccCCC-CCceEEEEcCCCceEEE
Q 045250           37 IKEVGDGNLNFVYIVVGTSGSFVIKQALPYV-RCIGESWPMTKERAYFEALALKEHGKLCPD-HVPEVYHFDRTMSLIGM  114 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~-r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~-~vP~v~~~D~e~~~~vM  114 (165)
                      .+.||.|..-.||++...+..+++|.-.+.. +....+-....+|...|.++|+.+..  |. ..|.+|.++.+...+||
T Consensus       341 ~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h--~nIv~~~~~~~~~~~~~lVm  418 (540)
T 3en9_A          341 EHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKD--FGIPAPYIFDVDLDNKRIMM  418 (540)
T ss_dssp             -------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGG--GTCCCCCEEEEETTTTEEEE
T ss_pred             CCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCC--CCcCceEEEEEeCCccEEEE
Confidence            4578999999999996655588888765532 11000112234677899999998843  33 34699999999999999


Q ss_pred             ecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250          115 RYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 Edl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      ||++  +.+|.+.+.+   .-.++.+|...|..+|...
T Consensus       419 E~~~--ggsL~~~l~~---~~~i~~qi~~aL~~LH~~g  451 (540)
T 3en9_A          419 SYIN--GKLAKDVIED---NLDIAYKIGEIVGKLHKND  451 (540)
T ss_dssp             ECCC--SEEHHHHSTT---CTHHHHHHHHHHHHHHHTT
T ss_pred             ECCC--CCCHHHHHHH---HHHHHHHHHHHHHHHHHCc
Confidence            9998  4588887765   4478999999999999753

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=97.39  E-value=0.0023  Score=49.79  Aligned_cols=109  Identities=17%  Similarity=0.042  Sum_probs=72.4

Q ss_pred             eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLIG  113 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~v  113 (165)
                      -.+.+|.|....||++...+..++||.......   .+..-..++...|.++|+.+..  | ++++++.  .+.....+|
T Consensus        11 ~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~~~~lv   84 (271)
T 3dtc_A           11 LEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPD---EDISQTIENVRQEAKLFAMLKH--P-NIIALRGVCLKEPNLCLV   84 (271)
T ss_dssp             EEEEEEEETTEEEEEEEETTEEEEEEEC-------------CHHHHHHHHHHHHHCCC--T-TBCCEEEEECCC--CEEE
T ss_pred             eeeeeccCCCeEEEEEEEcCCeEEEEEEecCCc---ccHHHHHHHHHHHHHHHHhcCC--C-CEeeEEEEEecCCceEEE
Confidence            567899999999999998744899998764332   2234456788889999888752  3 3444444  355667899


Q ss_pred             EecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  +..|.+.+..+....    .++.+|...|+.+|...
T Consensus        85 ~e~~~--~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~  125 (271)
T 3dtc_A           85 MEFAR--GGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEA  125 (271)
T ss_dssp             EECCT--TEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             EEcCC--CCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99997  357777775554433    56788899999999865

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=97.36  E-value=0.0024  Score=51.40  Aligned_cols=110  Identities=13%  Similarity=0.028  Sum_probs=78.5

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -.+.+|.|....||++.+. +| .++||........ ........++...|..+|+.+..  | ++++++.  .+.....
T Consensus        16 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~~~E~~~l~~l~h--~-~iv~~~~~~~~~~~~~   91 (321)
T 2a2a_A           16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSR-ASRRGVSREEIEREVSILRQVLH--H-NVITLHDVYENRTDVV   91 (321)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSS-SCSSSBCHHHHHHHHHHHHHCCC--T-TBCCEEEEEECSSEEE
T ss_pred             EeeEeeecCCEEEEEEEECCCCeEEEEEEEeccccc-ccccchhHHHHHHHHHHHHhCCC--C-CcceEEEEEecCCEEE
Confidence            4578999999999999986 45 7999977654432 12334567788899999988752  3 3444443  3556678


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      +|||+++  +..|.+.+..+..+     -.++.+|...|..+|..
T Consensus        92 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~  134 (321)
T 2a2a_A           92 LILELVS--GGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK  134 (321)
T ss_dssp             EEECCCC--SCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEcCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999997  45788877765432     25788889999999975

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=97.34  E-value=0.0038  Score=48.88  Aligned_cols=104  Identities=16%  Similarity=0.095  Sum_probs=71.9

Q ss_pred             eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~  112 (165)
                      -++.||.|....||++...++ .++||.-...        ....++...|+++|+.+.   -.++++++.+  +.....+
T Consensus        28 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--------~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~l   96 (283)
T 3gen_A           28 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG--------SMSEDEFIEEAKVMMNLS---HEKLVQLYGVCTKQRPIFI   96 (283)
T ss_dssp             EEEECC---CEEEEEEEETTTEEEEEEEECTT--------SBCHHHHHHHHHHHHTCC---CTTBCCEEEEECSSSSEEE
T ss_pred             hHhhcCCCCCceEEEEEEcCCCeEEEEEecCC--------CCCHHHHHHHHHHHhcCC---CCCEeeEEEEEecCCCeEE
Confidence            468899999999999998877 8999976532        234467888998888775   2345555554  3445689


Q ss_pred             EEecCCCCchHHHHHHHc--CCCC----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIA--GIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~--g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||+++  ...|.+.+.+  +...    -.++.+|...|..+|...
T Consensus        97 v~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  140 (283)
T 3gen_A           97 ITEYMA--NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ  140 (283)
T ss_dssp             EECCCT--TCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEeccC--CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999997  3577777766  2222    257788888999999753

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=97.34  E-value=0.0025  Score=51.09  Aligned_cols=102  Identities=17%  Similarity=0.021  Sum_probs=75.7

Q ss_pred             eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEe
Q 045250           36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMR  115 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vME  115 (165)
                      -.+.||.|....||++...+..++||+-...         -..++...|.+.|+.+.   -.++.+++.+..+...+|||
T Consensus        12 ~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~---------~~~~~~~~E~~~l~~l~---hp~iv~~~~~~~~~~~lv~e   79 (307)
T 2eva_A           12 VEEVVGRGAFGVVCKAKWRAKDVAIKQIESE---------SERKAFIVELRQLSRVN---HPNIVKLYGACLNPVCLVME   79 (307)
T ss_dssp             EEEEEECCSSSEEEEEEETTEEEEEEECSST---------THHHHHHHHHHHHHHCC---CTTBCCEEEBCTTTTEEEEE
T ss_pred             eeeEeecCCCceEEEEEECCeeEEEEEecCh---------hHHHHHHHHHHHHhcCC---CCCcCeEEEEEcCCcEEEEE
Confidence            4678999999999999987558999986421         12356677888887763   23566778887788999999


Q ss_pred             cCCCCchHHHHHHHcCCC----C----HHHHHHHHHHHHHHHhc
Q 045250          116 YLEPPHIILRKGLIAGIK----Y----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       116 dl~~~~~~lr~~l~~g~~----~----~~~a~~iG~~La~~h~~  151 (165)
                      |++  +.+|.+.+.....    .    -.++.+|...|+-+|..
T Consensus        80 ~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~  121 (307)
T 2eva_A           80 YAE--GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSM  121 (307)
T ss_dssp             CCT--TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred             cCC--CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhC
Confidence            997  4578888876542    1    24667889999999983

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=97.34  E-value=0.003  Score=49.35  Aligned_cols=105  Identities=17%  Similarity=0.049  Sum_probs=75.7

Q ss_pred             eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGM  114 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vM  114 (165)
                      -++.+|.|....||++...++ .++||....-        ....++...|.++|+.+..  |..++-.-.+..+...+||
T Consensus        17 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--------~~~~~~~~~E~~~l~~l~h--~~i~~~~~~~~~~~~~~v~   86 (279)
T 1qpc_A           17 LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG--------SMSPDAFLAEANLMKQLQH--QRLVRLYAVVTQEPIYIIT   86 (279)
T ss_dssp             EEEEEEEETTEEEEEEEETTTEEEEEEEECTT--------SSCHHHHHHHHHHHHHCCC--TTBCCEEEEECSSSCEEEE
T ss_pred             heeeecCCCCeEEEEEEEcCCcEEEEEEecCC--------cccHHHHHHHHHHHHhCCC--cCcceEEEEEcCCCcEEEE
Confidence            578899999999999998776 8999975421        1346788899999988742  5444444445666788999


Q ss_pred             ecCCCCchHHHHHHHcC---CCC----HHHHHHHHHHHHHHHhcc
Q 045250          115 RYLEPPHIILRKGLIAG---IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 Edl~~~~~~lr~~l~~g---~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      |+++  ..+|.+.+...   ...    -.++.+|...|+.+|...
T Consensus        87 e~~~--~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  129 (279)
T 1qpc_A           87 EYME--NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN  129 (279)
T ss_dssp             ECCT--TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ecCC--CCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9997  34777766542   222    257888999999999753

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=97.25  E-value=0.0019  Score=50.77  Aligned_cols=116  Identities=10%  Similarity=-0.019  Sum_probs=78.8

Q ss_pred             CCcc-eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC
Q 045250           32 FDDL-TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRT  108 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e  108 (165)
                      .+.+ -.+.+|.|....||++.+. ++ .++||.-............-...+...|.++|+.+.   -.++++++.+..+
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~   94 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN---HPNIVKLYGLMHN   94 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCC---CTTBCCEEEEETT
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCC---CCCchhhheeecC
Confidence            3444 5678999999999999985 44 799997653321100000011256777888887764   3467778888888


Q ss_pred             CceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250          109 MSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ...+|||+++  +..|.+.+.+..  ..    -.++.++...|+-+|...
T Consensus        95 ~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~  142 (287)
T 4f0f_A           95 PPRMVMEFVP--CGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQN  142 (287)
T ss_dssp             TTEEEEECCT--TCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred             CCeEEEEecC--CCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCC
Confidence            8899999998  346766665543  22    257888899999999875

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=97.23  E-value=0.0041  Score=48.58  Aligned_cols=110  Identities=13%  Similarity=0.061  Sum_probs=77.2

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -++.||.|....||++.+. +| .++||........ ........++...|..+|+.+..  |. +++++.  .+.....
T Consensus         9 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~~~~E~~~l~~l~h--~~-i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            9 MGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLS-SSRRGVSREEIEREVNILREIRH--PN-IITLHDIFENKTDVV   84 (283)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSST-TCSSSBCHHHHHHHHHHHHHCCC--TT-BCCEEEEEECSSEEE
T ss_pred             hHHhhcccCceEEEEEEEcCCCCeeehHHhhhcccc-ccccchHHHHHHHHHHHHHhCCC--CC-eeehhheecCCCeEE
Confidence            4678899999999999986 45 8999976544322 13344567888899999988752  33 444443  4556778


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      +|||+++  ...|.+.+.++...     -.++.+|...|..+|..
T Consensus        85 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~  127 (283)
T 3bhy_A           85 LILELVS--GGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK  127 (283)
T ss_dssp             EEEECCC--SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEeecC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999997  35777777554332     26788889999999965

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=97.23  E-value=0.0056  Score=49.62  Aligned_cols=110  Identities=15%  Similarity=0.055  Sum_probs=77.6

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      ..+.||.|....||++... +| .++||.-...... ...-....++...|.++|+.+..  |. +++++  +.+.....
T Consensus        15 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~~~~E~~~l~~l~h--p~-iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTK-SSRRGVSREDIEREVSILKEIQH--PN-VITLHEVYENKTDVI   90 (326)
T ss_dssp             EEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCST-TCSSSBCHHHHHHHHHHHHHCCC--TT-BCCEEEEEECSSEEE
T ss_pred             eceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccc-cccchhhHHHHHHHHHHHHhCCC--CC-CCcEEEEEEeCCEEE
Confidence            4678999999999999986 45 7888876543321 12234567788899999988752  43 44444  34556788


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      +|||+++  +..|.+.+.....+     -.++.+|...|.-+|..
T Consensus        91 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~  133 (326)
T 2y0a_A           91 LILELVA--GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL  133 (326)
T ss_dssp             EEEECCC--SCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEcCC--CCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999997  45788877665433     25788888999999965

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=97.17  E-value=0.007  Score=48.31  Aligned_cols=126  Identities=17%  Similarity=0.212  Sum_probs=83.5

Q ss_pred             HhhHHHHHHhCCCcccccCCCCCcc-eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHH
Q 045250           11 DKSLLEYIKATPSLSSKIGNKFDDL-TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALA   87 (165)
Q Consensus        11 ~~~v~~Yl~~~~~~~~~~~~~~~~~-~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~   87 (165)
                      .+++..-++..-.    .+...... -++.||.|....||++.+. +| .++||.-...-       .-..++...|..+
T Consensus         2 ~e~~~~~l~~~~~----~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~E~~~   70 (297)
T 3fxz_A            2 DEEILEKLRSIVS----VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-------QPKKELIINEILV   70 (297)
T ss_dssp             HHHHHHHHHHHSB----SSCGGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGG-------CSCHHHHHHHHHH
T ss_pred             hHHHHhhhhcccC----cCChhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccc-------ccHHHHHHHHHHH
Confidence            4455555554321    12233344 5778999999999999875 45 79999754221       1235677888888


Q ss_pred             HHHhhccCCCCCceEEE--EcCCCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250           88 LKEHGKLCPDHVPEVYH--FDRTMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus        88 L~~~~~~~p~~vP~v~~--~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      |+....  | ++++++.  .+.+...+|||+++  +.+|.+.+.++....    .++.+|...|+-+|...
T Consensus        71 l~~l~h--p-~iv~~~~~~~~~~~~~lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  136 (297)
T 3fxz_A           71 MRENKN--P-NIVNYLDSYLVGDELWVVMEYLA--GGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ  136 (297)
T ss_dssp             HHHCCC--T-TBCCEEEEEEETTEEEEEEECCT--TCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HhcCCC--C-CCCeEeEEEEECCEEEEEEECCC--CCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            877642  3 4555554  46677889999997  357888777665433    57788888899999753

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=97.17  E-value=0.0021  Score=54.23  Aligned_cols=107  Identities=18%  Similarity=0.174  Sum_probs=68.1

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      -++.||.|..-.||++.+. +| .|.||.-......     .-..++...|+++|+.+.-  |. +-++|  +.|.+...
T Consensus        28 ~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~-----~~~~~~~~~E~~il~~l~H--pn-IV~~~~~~~~~~~~y   99 (350)
T 4b9d_A           28 RLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMS-----SKEREESRREVAVLANMKH--PN-IVQYRESFEENGSLY   99 (350)
T ss_dssp             EEEEC------CEEEEEETTTCCEEEEEEEECTTSC-----HHHHHHHHHHHHHHHHCCC--TT-BCCEEEEEEETTEEE
T ss_pred             EeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCC-----HHHHHHHHHHHHHHHHCCC--CC-CCcEEEEEEECCEEE
Confidence            5788999999999999875 45 7999974321110     1124678889999988752  44 33444  34566678


Q ss_pred             EEEecCCCCchHHHHHHHcC--CCCH-----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAG--IKYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g--~~~~-----~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  +.+|.+.|.+.  ..++     .++.+|...|.-+|...
T Consensus       100 iVmEy~~--gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~  145 (350)
T 4b9d_A          100 IVMDYCE--GGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK  145 (350)
T ss_dssp             EEEECCT--TCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeCCC--CCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  45788887542  2222     36788999999999753

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=97.17  E-value=0.0014  Score=53.75  Aligned_cols=105  Identities=15%  Similarity=0.067  Sum_probs=71.4

Q ss_pred             EeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c----CCC
Q 045250           38 KEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--D----RTM  109 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D----~e~  109 (165)
                      ++||.|..-.||++.+. ++ .|.||.-...-..     .-..+|...|+++|+.+.-  | ++.++|.+  +    ...
T Consensus        32 ~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~-----~~~~~~~~~E~~il~~l~H--p-nIV~~~~~~~~~~~~~~~  103 (290)
T 3fpq_A           32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-----KSERQRFKEEAEMLKGLQH--P-NIVRFYDSWESTVKGKKC  103 (290)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-----HHHHHHHHHHHHHHHTCCC--T-TBCCEEEEEEEEETTEEE
T ss_pred             eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC-----HHHHHHHHHHHHHHHhCCC--C-CCCcEEEEEeeccCCCcE
Confidence            36999999999999876 45 7888864322111     1224677889999987742  3 45556643  2    233


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      ..+||||++  +.+|.+.|.++..+ .    .++.+|...|+-+|...
T Consensus       104 ~~lvmEy~~--gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~  149 (290)
T 3fpq_A          104 IVLVTELMT--SGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT  149 (290)
T ss_dssp             EEEEEECCC--SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred             EEEEEeCCC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            579999998  45788888765443 2    46778889999999764

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=97.16  E-value=0.003  Score=49.05  Aligned_cols=104  Identities=17%  Similarity=0.126  Sum_probs=73.5

Q ss_pred             eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~  112 (165)
                      -++.+|.|....||++...++ .++||.-..-        ....++...|.++|+.+..  | ++++++.+  +.....+
T Consensus        12 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--------~~~~~~~~~E~~~l~~l~h--~-~i~~~~~~~~~~~~~~l   80 (268)
T 3sxs_A           12 LLKELGSGQFGVVKLGKWKGQYDVAVKMIKEG--------SMSEDEFFQEAQTMMKLSH--P-KLVKFYGVCSKEYPIYI   80 (268)
T ss_dssp             EEEEEEEETTEEEEEEEETTTEEEEEEEECBT--------TBCHHHHHHHHHHHHHCCC--T-TBCCEEEEECSSSSEEE
T ss_pred             eeeeeccCCCceEEEEEecCceeEEEEEeccC--------CCcHHHHHHHHHHHHhCCC--C-CEeeEEEEEccCCceEE
Confidence            577899999999999998877 7999976421        1344678889999988752  3 44555554  3345679


Q ss_pred             EEecCCCCchHHHHHHHcC-C-CC----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAG-I-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g-~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||+++  ...|.+.+... . ..    -.++.+|...|+.+|...
T Consensus        81 v~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  124 (268)
T 3sxs_A           81 VTEYIS--NGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ  124 (268)
T ss_dssp             EEECCT--TCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEccC--CCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999997  34666666542 2 22    257888899999999764

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=97.15  E-value=0.0033  Score=50.01  Aligned_cols=106  Identities=14%  Similarity=0.128  Sum_probs=72.7

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC-----
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRT-----  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e-----  108 (165)
                      -++.||.|....||++.+. +| .++||.-..      +.-....++...|.++|+.+.  -| ++.+++.+-.+     
T Consensus        10 ~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~------~~~~~~~~~~~~E~~~l~~l~--hp-niv~~~~~~~~~~~~~   80 (332)
T 3qd2_B           10 PIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRL------PNRELAREKVMREVKALAKLE--HP-GIVRYFNAWLETPPEK   80 (332)
T ss_dssp             EEEEEECC-CSEEEEEEETTTCCEEEEEEEEC------CSTTTHHHHHHHHHHHHTSCC--CT-TBCCEEEEEEECCSCH
T ss_pred             eeeEecCCCCeEEEEEEEcCCCcEEEEEEeec------CCchhHHHHHHHHHHHHHhCC--CC-CEeeEEEEEEEeccch
Confidence            4678999999999999986 55 899997531      122344577888888887774  13 34444443111     


Q ss_pred             ------------------------------------------------------CceEEEecCCCCchHHHHHHHcCCCC
Q 045250          109 ------------------------------------------------------MSLIGMRYLEPPHIILRKGLIAGIKY  134 (165)
Q Consensus       109 ------------------------------------------------------~~~~vMEdl~~~~~~lr~~l~~g~~~  134 (165)
                                                                            ...+|||+++  ...|.+.+......
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~--~~~L~~~~~~~~~~  158 (332)
T 3qd2_B           81 WQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCR--KENLKDWMNRRCSL  158 (332)
T ss_dssp             HHHHHHC--------------------------------------------CCCEEEEEEECCC--SSCHHHHHHTCCSG
T ss_pred             hhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecC--CCCHHHHHhcccCc
Confidence                                                                  1579999998  45788877765432


Q ss_pred             --------HHHHHHHHHHHHHHHhcc
Q 045250          135 --------PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       135 --------~~~a~~iG~~La~~h~~t  152 (165)
                              -.++.+|...|+-+|...
T Consensus       159 ~~~~~~~~~~i~~qi~~aL~~LH~~~  184 (332)
T 3qd2_B          159 EDREHGVCLHIFIQIAEAVEFLHSKG  184 (332)
T ss_dssp             GGSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHhCC
Confidence                    257889999999999764

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=97.13  E-value=0.0042  Score=51.25  Aligned_cols=106  Identities=15%  Similarity=0.021  Sum_probs=72.8

Q ss_pred             eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCCCceEEE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH-FDRTMSLIGM  114 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~e~~~~vM  114 (165)
                      -.+.||.|..--||++... +.+.||.-...-.     -+-..++...|+++|+.+.-  |..| ++|. ++.++..+||
T Consensus        40 l~~~iG~G~fG~Vy~~~~~-~~vAvK~~~~~~~-----~~~~~~~f~~E~~il~~l~H--pNIV-~l~g~~~~~~~~iVm  110 (307)
T 3omv_A           40 LSTRIGSGSFGTVYKGKWH-GDVAVKILKVVDP-----TPEQFQAFRNEVAVLRKTRH--VNIL-LFMGYMTKDNLAIVT  110 (307)
T ss_dssp             EEEECCCCSSSEEEEEESS-SEEEEEECCCSSC-----CHHHHHHHHHHHHHHTTCCC--TTBC-CEEEEECSSSCEEEE
T ss_pred             EeeEEeeCCCcEEEEEEEC-CcEEEEEEEecCC-----CHHHHHHHHHHHHHHHhCCC--CCEe-eEEEEEECCeEEEEE
Confidence            3577999999999999865 4788886431111     11223566778888877642  5544 4444 4567778999


Q ss_pred             ecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250          115 RYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 Edl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||++  +.+|.+.|...+  ..    -.++.+|+..|+-+|...
T Consensus       111 Ey~~--gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~  152 (307)
T 3omv_A          111 QWCE--GSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN  152 (307)
T ss_dssp             ECCS--SCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EcCC--CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9998  458888886543  32    257889999999999753

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=97.12  E-value=0.0035  Score=51.40  Aligned_cols=105  Identities=13%  Similarity=0.059  Sum_probs=72.7

Q ss_pred             eeEeccCCceeEEEEEE------eCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c
Q 045250           36 TIKEVGDGNLNFVYIVV------GTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--D  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~------~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D  106 (165)
                      -.+.||.|..-.||++.      ..++ .++||...+.          ...+...|.+.++.+....-..+..++.+  +
T Consensus        69 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~----------~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~  138 (365)
T 3e7e_A           69 VHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA----------NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF  138 (365)
T ss_dssp             EEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC----------CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred             EEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC----------ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence            34568999999999994      2345 8999986432          34577888888888875433334455444  6


Q ss_pred             CCCceEEEecCCCCchHHHHHHHc-----CC-CC----HHHHHHHHHHHHHHHhcc
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLIA-----GI-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~~-----g~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .+...+||||++  +.+|.+.+..     +. ..    -.++.+|...|+-+|...
T Consensus       139 ~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~  192 (365)
T 3e7e_A          139 QNGSVLVGELYS--YGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE  192 (365)
T ss_dssp             SSCEEEEECCCC--SCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             CCCcEEEEeccC--CCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            678899999998  4577777753     22 22    257888899999999753

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=97.12  E-value=0.0088  Score=47.78  Aligned_cols=108  Identities=9%  Similarity=-0.063  Sum_probs=74.4

Q ss_pred             eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~  111 (165)
                      -.+.||.|....||++.+.. | .++||.-.+.....    .-...+...|...|+.+   .-.++++++.+  +.+...
T Consensus        35 i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~----~~~~~~~~~e~~~l~~l---~hp~iv~~~~~~~~~~~~~  107 (286)
T 3uqc_A           35 LLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLP----DDVLQETLSRTLRLSRI---DKPGVARVLDVVHTRAGGL  107 (286)
T ss_dssp             EEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSC----HHHHHHHHHHHHHHHTC---CCTTBCCEEEEEEETTEEE
T ss_pred             EEEEEcccCCeEEEEEEecCCCceEEEEEECcccccC----HHHHHHHHHHHHHHhcC---CCCCcceeeEEEEECCcEE
Confidence            45789999999999999873 5 89999876433210    11225666677666544   33356667655  556678


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC---HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY---PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~---~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  +.+|.+.+..+...   -.++.+|...|..+|...
T Consensus       108 lv~e~~~--g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~g  149 (286)
T 3uqc_A          108 VVAEWIR--GGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAG  149 (286)
T ss_dssp             EEEECCC--EEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEecC--CCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997  56888888665422   257788888999999763

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=97.12  E-value=0.0051  Score=47.55  Aligned_cols=104  Identities=18%  Similarity=0.127  Sum_probs=74.2

Q ss_pred             eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~  112 (165)
                      -++.+|.|....||++...++ .++||.-....        ...++...|.+.|+.+.  .| ++++++.+  +.....+
T Consensus        12 ~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~--------~~~~~~~~e~~~l~~l~--h~-~i~~~~~~~~~~~~~~l   80 (267)
T 3t9t_A           12 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA--------MSEEDFIEEAEVMMKLS--HP-KLVQLYGVCLEQAPICL   80 (267)
T ss_dssp             EEEEEEEETTEEEEEEEETTTEEEEEEEECTTT--------BCHHHHHHHHHHHHTCC--CT-TBCCEEEEECSSSSCEE
T ss_pred             eeeEecCCCceeEEEEEecCCCeEEEEEccccC--------CCHHHHHHHHHHHHhCC--CC-CEeeEEEEEccCCCeEE
Confidence            567899999999999998766 89999865322        23467788888888774  23 34455543  5567789


Q ss_pred             EEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||+++  +..|.+.+....  ..    -.++.+|...|..+|...
T Consensus        81 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  124 (267)
T 3t9t_A           81 VTEFME--HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC  124 (267)
T ss_dssp             EECCCT--TCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEeCCC--CCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999997  347777776532  22    257788899999999764

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=97.11  E-value=0.005  Score=53.22  Aligned_cols=105  Identities=16%  Similarity=0.163  Sum_probs=76.3

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      .+++||.|..-.||++... +| .|.||.-.-  +  .   .-..++...|.++|+.+.-  |. +-++|  +.|.+...
T Consensus       155 ~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~--~--~---~~~~~~~~~Ei~il~~l~H--pn-IV~l~~~~~~~~~~~  224 (423)
T 4fie_A          155 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMDL--R--K---QQRRELLFNEVVIMRDYQH--EN-VVEMYNSYLVGDELW  224 (423)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEES--T--T---CSSGGGHHHHHHHHHHCCC--TT-BCCEEEEEEETTEEE
T ss_pred             eeeEeccCcCcEEEEEEECCCCCEEEEEEEec--c--c---hhHHHHHHHHHHHHHhCCC--CC-CCceEEEEEECCEEE
Confidence            6789999999999999986 46 788997531  1  1   1235678889999988742  43 44444  34667788


Q ss_pred             EEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  +..|.+.+..+....    .++.+|...|.-+|...
T Consensus       225 iVmEy~~--gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~  267 (423)
T 4fie_A          225 VVMEFLE--GGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG  267 (423)
T ss_dssp             EEEECCT--TEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeCCC--CCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  447888777776653    46778888888888753

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=97.10  E-value=0.005  Score=51.79  Aligned_cols=105  Identities=16%  Similarity=0.179  Sum_probs=75.9

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      .+++||.|..-.||++... +| .|.||.-.  .+  ..   -..++...|.++|+.+.-  | ++-++|  +.|.+...
T Consensus        78 ~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~--~~--~~---~~~~~~~~Ei~il~~l~H--p-nIV~l~~~~~~~~~~~  147 (346)
T 4fih_A           78 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMD--LR--KQ---QRRELLFNEVVIMRDYQH--E-NVVEMYNSYLVGDELW  147 (346)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEE--GG--GC---SSGGGGHHHHHHHHHCCC--T-TBCCEEEEEEETTEEE
T ss_pred             EeEEeecCcCeEEEEEEECCCCCEEEEEEEe--cC--ch---hHHHHHHHHHHHHHhCCC--C-CCCcEEEEEEECCEEE
Confidence            5788999999999999886 56 78899753  11  11   234678889999988742  4 344444  34667788


Q ss_pred             EEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  +..|.+.+.++....    .++.+|...|.-+|...
T Consensus       148 ivmEy~~--gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~  190 (346)
T 4fih_A          148 VVMEFLE--GGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG  190 (346)
T ss_dssp             EEECCCT--TEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeCCC--CCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  347888887777653    46677888888888753

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=97.07  E-value=0.011  Score=46.89  Aligned_cols=112  Identities=14%  Similarity=-0.011  Sum_probs=76.8

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC-----
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRT-----  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e-----  108 (165)
                      -++.||.|....||++.+. +| .++||.-......  ..-.-...+...|.+.|+.+..+--.++++++.+-.+     
T Consensus        13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~   90 (308)
T 3g33_A           13 PVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGG--GGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDR   90 (308)
T ss_dssp             EEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCC--TTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSS
T ss_pred             EEEEEecCCCeEEEEEEECCCCcEEEEEEEeccccc--ccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCC
Confidence            5688999999999999975 45 7999976533221  1111223467788999988887544556666654322     


Q ss_pred             --CceEEEecCCCCchHHHHHHHcCCC---C----HHHHHHHHHHHHHHHhcc
Q 045250          109 --MSLIGMRYLEPPHIILRKGLIAGIK---Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 --~~~~vMEdl~~~~~~lr~~l~~g~~---~----~~~a~~iG~~La~~h~~t  152 (165)
                        ...++||+++ .  .|.+.+.....   .    -.++.+|...|+-+|...
T Consensus        91 ~~~~~lv~e~~~-~--~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~  140 (308)
T 3g33_A           91 EIKVTLVFEHVD-Q--DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC  140 (308)
T ss_dssp             EEEEEEEEECCC-C--BHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ceeEEEEehhhh-c--CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              2579999998 3  77777766542   2    257888899999999764

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=97.06  E-value=0.011  Score=47.70  Aligned_cols=106  Identities=13%  Similarity=-0.007  Sum_probs=73.3

Q ss_pred             eeEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--Ec
Q 045250           36 TIKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FD  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D  106 (165)
                      -.+.||.|....||++...      ++ .++||.-.....      .-..++...|..+|+.+... |. +++++.  .+
T Consensus        49 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-p~-iv~~~~~~~~  120 (344)
T 1rjb_A           49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD------SSEREALMSELKMMTQLGSH-EN-IVNLLGACTL  120 (344)
T ss_dssp             EEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------------CHHHHHHHHHHHHHCCC-TT-BCCEEEEECS
T ss_pred             eeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccC------HHHHHHHHHHHHHHHhhcCC-CC-eeeEEEEEee
Confidence            4678999999999999861      33 699998764322      12347888999999888543 33 344443  35


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCC------------------------C----HHHHHHHHHHHHHHHhc
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLIAGIK------------------------Y----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~~g~~------------------------~----~~~a~~iG~~La~~h~~  151 (165)
                      .+...+|||+++  +.+|.+.+.....                        .    -.++.+|...|+-+|..
T Consensus       121 ~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~  191 (344)
T 1rjb_A          121 SGPIYLIFEYCC--YGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK  191 (344)
T ss_dssp             SSSCEEEEECCT--TCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCccEEEEecCC--CCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC
Confidence            677889999997  4578887766431                        1    24788999999999975

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=97.02  E-value=0.0061  Score=48.57  Aligned_cols=108  Identities=16%  Similarity=0.064  Sum_probs=74.6

Q ss_pred             eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~  112 (165)
                      -++.||.|....||++.+.+| .++||.-.....     -.-..++...|.++|+.+....|. +.+++.  .+.....+
T Consensus        32 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~E~~~l~~l~~~~~~-iv~~~~~~~~~~~~~l  105 (313)
T 3cek_A           32 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA-----DNQTLDSYRNEIAYLNKLQQHSDK-IIRLYDYEITDQYIYM  105 (313)
T ss_dssp             EEEEEECCSSEEEEEEECTTCCEEEEEEEECSSC-----CHHHHHHHHHHHHHHHHHGGGCTT-BCCEEEEEECSSEEEE
T ss_pred             EEEEecCCCCEEEEEEEcCCCcEEEEEEeccccc-----cccchHHHHHHHHHHHhccccCCc-eEEEEEEeecCCEEEE
Confidence            567899999999999998777 789997532111     112346778899999888764444 444553  35566788


Q ss_pred             EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |||+.+   .+|.+.+.+....     -.++.+|...|+.+|...
T Consensus       106 v~e~~~---~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  147 (313)
T 3cek_A          106 VMECGN---IDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG  147 (313)
T ss_dssp             EECCCS---EEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEecCC---CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999443   4777777665432     247788899999999763

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=97.02  E-value=0.0014  Score=54.27  Aligned_cols=112  Identities=13%  Similarity=0.067  Sum_probs=73.1

Q ss_pred             EeccCCceeEEEEEEeC-CC-eEEEEecCccccccC-CCCCCChHHHHHHHHHHHHhhccCCCC-CceEEEEcCCCceEE
Q 045250           38 KEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIG-ESWPMTKERAYFEALALKEHGKLCPDH-VPEVYHFDRTMSLIG  113 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~-~~~~l~~~R~~~E~~~L~~~~~~~p~~-vP~v~~~D~e~~~~v  113 (165)
                      ++||.|....||++.+. +| .|+||.-.+...... .+..--.++...|..+|+.+... |.. .+..++.+.....+|
T Consensus       100 ~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h-p~iv~~~~~~~~~~~~~lv  178 (365)
T 2y7j_A          100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGH-PHIITLIDSYESSSFMFLV  178 (365)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTC-TTBCCEEEEEEBSSEEEEE
T ss_pred             eEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCC-CCEeEEEEEEeeCCEEEEE
Confidence            78999999999999986 56 899997654432100 00011134567788888887543 332 233344556777899


Q ss_pred             EecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  +..|.+.+.++...     -.++.+|...|..+|...
T Consensus       179 ~e~~~--g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~g  220 (365)
T 2y7j_A          179 FDLMR--KGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANN  220 (365)
T ss_dssp             ECCCT--TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEeCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99998  34677766654322     257788888888888753

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=97.00  E-value=0.0034  Score=51.30  Aligned_cols=106  Identities=15%  Similarity=0.193  Sum_probs=68.6

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCC--
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTM--  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~--  109 (165)
                      -++.||.|..-.||++... +| .+.||.-    +.  ++-....++...|.++|+.+. + | ++.++|.+  +.+.  
T Consensus         9 ~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i----~~--~~~~~~~~~~~~E~~il~~l~-H-p-nIV~~~~~~~~~~~~~   79 (299)
T 4g31_A            9 PIQCLGRGGFGVVFEAKNKVDDCNYAIKRI----RL--PNRELAREKVMREVKALAKLE-H-P-GIVRYFNAWLEKNTTE   79 (299)
T ss_dssp             EEEEEEECC--EEEEEEETTTCCEEEEEEE----EE--CSSHHHHHHHHHHHHHHTTCC-C-T-TBCCEEEEEEEEC---
T ss_pred             EeeEEecCCCeEEEEEEECCCCCEEEEEEE----ec--cCCHHHHHHHHHHHHHHHhCC-C-C-CCCeEEEEEEecCccc
Confidence            3678999999999999875 45 7889963    22  111223467778888887764 2 4 34444432  2221  


Q ss_pred             ----------ceEEEecCCCCchHHHHHHHcCCCC--------HHHHHHHHHHHHHHHhcc
Q 045250          110 ----------SLIGMRYLEPPHIILRKGLIAGIKY--------PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ----------~~~vMEdl~~~~~~lr~~l~~g~~~--------~~~a~~iG~~La~~h~~t  152 (165)
                                ..+||||++  ..+|.+.+......        -.++.+|...|.-+|...
T Consensus        80 ~~~~~~~~~~l~ivmE~~~--gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~  138 (299)
T 4g31_A           80 KLQPSSPKVYLYIQMQLCR--KENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG  138 (299)
T ss_dssp             -------CEEEEEEEECCC--SCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccccCCCcEEEEEEecCC--CCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc
Confidence                      358999998  45888887654322        146788999999999764

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=96.99  E-value=0.0091  Score=47.77  Aligned_cols=105  Identities=14%  Similarity=0.026  Sum_probs=73.7

Q ss_pred             eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC--C
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRT--M  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e--~  109 (165)
                      -.+.||.|....||++.+.. | .++||.-.....      .-..++...|.++|+.+..  | ++++++.+  +..  .
T Consensus        13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~-~iv~~~~~~~~~~~~~   83 (319)
T 4euu_A           13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF------LRPVDVQMREFEVLKKLNH--K-NIVKLFAIEEETTTRH   83 (319)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG------GSCHHHHHHHHHHHHHCCC--T-TBCCEEEEEECTTTCC
T ss_pred             EEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc------cchHHHHHHHHHHHHhcCC--C-CcceEEEEeecCCCce
Confidence            56789999999999999873 5 899998653221      2345777889999988752  3 45555543  223  4


Q ss_pred             ceEEEecCCCCchHHHHHHHcCC----CC----HHHHHHHHHHHHHHHhc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGI----KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~----~~----~~~a~~iG~~La~~h~~  151 (165)
                      ..+|||+++  +..|.+.+....    ..    -.++.+|...|+-+|..
T Consensus        84 ~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~  131 (319)
T 4euu_A           84 KVLIMEFCP--CGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN  131 (319)
T ss_dssp             EEEEEECCT--TCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEeCCC--CCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            479999997  457777776532    22    25788888999999975

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=96.98  E-value=0.0064  Score=48.77  Aligned_cols=113  Identities=17%  Similarity=0.037  Sum_probs=72.6

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccC-CCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIG-ESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~-~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~  112 (165)
                      -.+.||.|....||++.+. +| .++||.-.......+ ..-.-...+...|.++|+.+..  |..++-.-.++.+...+
T Consensus        14 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~~i~~~~~~~~~~~~~l   91 (322)
T 2ycf_A           14 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH--PCIIKIKNFFDAEDYYI   91 (322)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCC--TTBCCEEEEEESSSEEE
T ss_pred             EeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCC--CCCceEeeEEcCCceEE
Confidence            4578999999999999876 45 899998654321100 0011223456778888887742  55555444556677899


Q ss_pred             EEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      |||+++  +..|.+.+..+..+ .    .++.+|...|..+|...
T Consensus        92 v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  134 (322)
T 2ycf_A           92 VLELME--GGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG  134 (322)
T ss_dssp             EEECCT--TEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEecCC--CCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999997  34777777665433 2    46778889999999653

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=96.97  E-value=0.0081  Score=47.72  Aligned_cols=107  Identities=8%  Similarity=0.048  Sum_probs=73.9

Q ss_pred             ccee--EeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC
Q 045250           34 DLTI--KEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDR  107 (165)
Q Consensus        34 ~~~v--~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~  107 (165)
                      ...+  +.||.|....||++.+. +| .++||.-...       -.-...+...|.++|+..... | ++++++.  .+.
T Consensus        13 ~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~~~~~~~E~~~l~~~~~h-~-~i~~~~~~~~~~   83 (316)
T 2ac3_A           13 VYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQ-------PGHIRSRVFREVEMLYQCQGH-R-NVLELIEFFEEE   83 (316)
T ss_dssp             SCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECC-------SSCCHHHHHHHHHHHHHTCCC-T-TBCCEEEEEEET
T ss_pred             eEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeC-------cchhHHHHHHHHHHHHHhcCC-C-CeeeEEEEEeeC
Confidence            3455  56999999999999875 45 8999975311       123456888899988775432 3 3444443  356


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 045250          108 TMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       108 e~~~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      +...+|||+++  +..|.+.+.....+     ..++.+|...|+-+|..
T Consensus        84 ~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~  130 (316)
T 2ac3_A           84 DRFYLVFEKMR--GGSILSHIHKRRHFNELEASVVVQDVASALDFLHNK  130 (316)
T ss_dssp             TEEEEEEECCT--TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CEEEEEEEcCC--CCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            77889999997  34777777654432     24778889999999976

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=96.95  E-value=0.0045  Score=49.05  Aligned_cols=109  Identities=14%  Similarity=0.055  Sum_probs=74.0

Q ss_pred             eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLIG  113 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~v  113 (165)
                      ..+.||.|....||++...+..++||........   ...-..++...|..+|+.+..  | ++++++.+  +.....+|
T Consensus        35 ~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~~E~~~l~~l~h--~-~i~~~~~~~~~~~~~~lv  108 (307)
T 2nru_A           35 GGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDI---TTEELKQQFDQEIKVMAKCQH--E-NLVELLGFSSDGDDLCLV  108 (307)
T ss_dssp             TCCEEEECSSEEEEEEESSSCEEEEEEECCCTTS---CTTTHHHHHHHHHHHHHHCCC--T-TBCCEEEEECSSSSCEEE
T ss_pred             cCCccccCCCeEEEEEEECCceEEEEEEecccCc---chHHHHHHHHHHHHHHHhcCC--C-CeEEEEEEEecCCceEEE
Confidence            3478999999999999976458999987644321   122334677788888887742  3 44555544  45677899


Q ss_pred             EecCCCCchHHHHHHHc---CC-CC----HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIA---GI-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~---g~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  +..|.+.+..   +. ..    -.++.+|...|..+|...
T Consensus       109 ~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~  153 (307)
T 2nru_A          109 YVYMP--NGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH  153 (307)
T ss_dssp             EECCT--TCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEecC--CCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            99997  3467666653   11 22    257888899999999763

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=96.95  E-value=0.0073  Score=49.10  Aligned_cols=108  Identities=16%  Similarity=0.082  Sum_probs=75.8

Q ss_pred             eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~  112 (165)
                      -++.||.|....||++.+.++ .++||.-....     .-.-..++...|.++|+.+....| ++++++.+  +.....+
T Consensus        13 i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~E~~~l~~l~~~~~-~iv~~~~~~~~~~~~~l   86 (343)
T 3dbq_A           13 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE-----ADNQTLDSYRNEIAYLNKLQQHSD-KIIRLYDYEITDQYIYM   86 (343)
T ss_dssp             EEEEESCCSSEEEEEEECTTSCEEEEEEEECTT-----CCHHHHHHHHHHHHHHHHHTTTCT-TBCCEEEEEECSSEEEE
T ss_pred             EEEEEecCCCeEEEEEEeCCCCEEEEEEeeccc-----cchHHHHHHHHHHHHHHhhhhcCC-ceEEEeeeEeeCCEEEE
Confidence            568899999999999998777 78999753211     111223567789999988876433 45666655  4556689


Q ss_pred             EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |||+.+   ..|.+.+......     -.++.+|...|.-+|...
T Consensus        87 v~e~~~---~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~  128 (343)
T 3dbq_A           87 VMECGN---IDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG  128 (343)
T ss_dssp             EECCCS---EEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEeCCC---CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999544   3777777765543     257788899999999764

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=96.95  E-value=0.014  Score=47.31  Aligned_cols=107  Identities=15%  Similarity=0.130  Sum_probs=69.5

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      -++.||.|..--||++... +| .+.||.-......    -.-...|...|.++|+.+.-  |. +.+++  +.|++...
T Consensus        17 i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~----~~~~~~~~~~Ei~il~~l~H--pn-Iv~~~~~~~~~~~~~   89 (275)
T 3hyh_A           17 IVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLA----KSDMQGRIEREISYLRLLRH--PH-IIKLYDVIKSKDEII   89 (275)
T ss_dssp             EEEEEEC---CCEEEEECTTTCCEEEEEEEECC----------CHHHHHHHHHHHHHCCC--TT-BCCEEEEEECSSEEE
T ss_pred             EEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcC----CHHHHHHHHHHHHHHHHCCC--CC-CCeEEEEEEECCEEE
Confidence            3578999999999999875 45 8999974322211    11235688899999988852  43 34443  34667788


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  + .|.+.+.+...+ .    .++.+|...|.-+|...
T Consensus        90 ivmEy~~--g-~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~  132 (275)
T 3hyh_A           90 MVIEYAG--N-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK  132 (275)
T ss_dssp             EEEECCC--E-EHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeCCC--C-CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999996  3 566766654433 2    56778888888888754

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=96.94  E-value=0.0083  Score=47.56  Aligned_cols=107  Identities=17%  Similarity=0.167  Sum_probs=72.3

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~  111 (165)
                      -++.+|.|....||++.+. +| .++||.-....     .......+...|+++|+.+..  | ++++++.+  +.....
T Consensus         7 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~E~~~l~~l~h--~-~i~~~~~~~~~~~~~~   78 (311)
T 4agu_A            7 KIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE-----DDPVIKKIALREIRMLKQLKH--P-NLVNLLEVFRRKRRLH   78 (311)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEECCCC-----C-HHHHHHHHHHHHHHHHCCC--T-TBCCEEEEEEETTEEE
T ss_pred             EeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccc-----cchHHHHHHHHHHHHHHhCCC--C-CccchhheeecCCeEE
Confidence            4678999999999999986 35 79999654221     111223456678888887752  3 34445444  555678


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  ...+...+..+...     ..++.+|...|+-+|...
T Consensus        79 lv~e~~~--~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~  122 (311)
T 4agu_A           79 LVFEYCD--HTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN  122 (311)
T ss_dssp             EEEECCS--EEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEeCC--CchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  45777766654433     257778888999999753

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=96.93  E-value=0.0066  Score=47.86  Aligned_cols=112  Identities=20%  Similarity=0.034  Sum_probs=76.2

Q ss_pred             CCcceeE--eccCCceeEEEEEEeC---CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE
Q 045250           32 FDDLTIK--EVGDGNLNFVYIVVGT---SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF  105 (165)
Q Consensus        32 ~~~~~v~--~l~~Gn~N~v~rV~~~---~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~  105 (165)
                      ...+.+.  .||.|....||++...   .+ .++||.-.....     -....++...|.++|+.+.  .|..++-.-.+
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~   87 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-----DPALKDELLAEANVMQQLD--NPYIVRMIGIC   87 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC----------CHHHHHHHHHHHHHHTCC--CTTBCCEEEEE
T ss_pred             chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeeccccc-----CHHHHHHHHHHHHHHHhCC--CCCEEEEEEEE
Confidence            3445443  6999999999999542   33 788997653321     1122467778888888774  35555555556


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          106 DRTMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~e~~~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +.+...+|||+++  +.+|.+.+.++...     -.++.+|...|..+|...
T Consensus        88 ~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~  137 (291)
T 1xbb_A           88 EAESWMLVMEMAE--LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN  137 (291)
T ss_dssp             ESSSEEEEEECCT--TEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCcEEEEEeCC--CCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            6777889999998  45788888765432     257888899999999763

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=96.93  E-value=0.01  Score=47.56  Aligned_cols=106  Identities=12%  Similarity=0.021  Sum_probs=73.9

Q ss_pred             eeEeccCCceeEEEEEEeCC------C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c
Q 045250           36 TIKEVGDGNLNFVYIVVGTS------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--D  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D  106 (165)
                      -++.||.|....||++...+      + .++||.-.+...      .-..++...|.++|+.+.   -.++++++.+  +
T Consensus        51 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~---hp~iv~~~~~~~~  121 (343)
T 1luf_A           51 YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS------ADMQADFQREAALMAEFD---NPNIVKLLGVCAV  121 (343)
T ss_dssp             EEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC------HHHHHHHHHHHHHHHTCC---CTTBCCEEEEECS
T ss_pred             eeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccC------HHHHHHHHHHHHHHHhCC---CCCEEEEEEEEcc
Confidence            56789999999999998752      3 699998753321      112356777888887773   2345555554  5


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcC-------------------------CCC----HHHHHHHHHHHHHHHhcc
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLIAG-------------------------IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~~g-------------------------~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .....+|||+++  +.+|.+.+.+.                         ...    -.++.+|...|..+|...
T Consensus       122 ~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~  194 (343)
T 1luf_A          122 GKPMCLLFEYMA--YGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK  194 (343)
T ss_dssp             SSSCEEEEECCT--TCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCceEEEEecCC--CCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            677899999997  45777777652                         121    137889999999999764

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=96.93  E-value=0.0066  Score=50.13  Aligned_cols=108  Identities=13%  Similarity=0.091  Sum_probs=74.7

Q ss_pred             CCcc-eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--Ec
Q 045250           32 FDDL-TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FD  106 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D  106 (165)
                      .+.+ -++.||.|....||++.+. +| .++||.-..-     .   ...++...|...|+.+..  | ++++++.  .+
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~---~~~~~~~~E~~~l~~l~h--p-niv~~~~~~~~   87 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERG-----A---AIDENVQREIINHRSLRH--P-NIVRFKEVILT   87 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESS-----T---TSCHHHHHHHHHHHHCCC--T-TBCCEEEEEEC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecC-----c---cccHHHHHHHHHHHhCCC--C-CCCcEEEEEee
Confidence            3445 5678999999999999986 45 7999975321     1   223677888888887752  3 3444444  36


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCC-CC----HHHHHHHHHHHHHHHhcc
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLIAGI-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~~g~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .....+||||++  +..|.+.+.... ..    -.++.+|...|+-+|...
T Consensus        88 ~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~  136 (361)
T 3uc3_A           88 PTHLAIIMEYAS--GGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQ  136 (361)
T ss_dssp             SSEEEEEEECCC--SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEEEEeCC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            777889999997  346777665533 32    257788888888899653

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=96.92  E-value=0.016  Score=45.86  Aligned_cols=106  Identities=17%  Similarity=0.073  Sum_probs=74.8

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      .++.||.|....||++.+. +| .++||.-....      ..-..++...|...|+.+..  | ++++++.  .+.....
T Consensus        26 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~~~~   96 (303)
T 3a7i_A           26 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE------AEDEIEDIQQEITVLSQCDS--P-YVTKYYGSYLKDTKLW   96 (303)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEETTT------CSTTHHHHHHHHHHHHHCCC--T-TBCCEEEEEEETTEEE
T ss_pred             HhhhhcccCCeEEEEEEECCCCcEEEEEEecccc------cHHHHHHHHHHHHHHHhCCC--C-CEeEEEEEEecCCeEE
Confidence            5788999999999999875 45 79999754221      12345777888888877632  3 3444443  3556778


Q ss_pred             EEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  +..|.+.+..+....    .++.+|...|..+|...
T Consensus        97 lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  139 (303)
T 3a7i_A           97 IIMEYLG--GGSALDLLEPGPLDETQIATILREILKGLDYLHSEK  139 (303)
T ss_dssp             EEEECCT--TEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEeCC--CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  457888777665543    57778888888888753

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=96.92  E-value=0.0032  Score=54.19  Aligned_cols=110  Identities=16%  Similarity=0.058  Sum_probs=69.5

Q ss_pred             eEeccCCceeEEEEEEeCCC-eEEEEecCccccc---cCC--CCC--CCh------HH--HHHHHHHHHHhhccCCCCCc
Q 045250           37 IKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRC---IGE--SWP--MTK------ER--AYFEALALKEHGKLCPDHVP  100 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~---~~~--~~~--l~~------~R--~~~E~~~L~~~~~~~p~~vP  100 (165)
                      ...||-|-.--||++.+.+| .+.||.=++-...   ...  ++.  ...      .|  +..|.+.|..+... ...+|
T Consensus       100 ~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~-gv~vp  178 (397)
T 4gyi_A          100 GSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEE-GFPVP  178 (397)
T ss_dssp             EEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHT-TCSCC
T ss_pred             cCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhc-CCCCC
Confidence            46788888888999999888 8999963322110   000  000  000      11  23466777777552 45678


Q ss_pred             eEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250          101 EVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       101 ~v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      ++|.+  ..+++|||+++  +..+++.. .-.....+..+|...|..+|...
T Consensus       179 ~p~~~--~~~~LVME~i~--G~~L~~l~-~~~~~~~l~~qll~~l~~lH~~g  225 (397)
T 4gyi_A          179 EPIAQ--SRHTIVMSLVD--ALPMRQVS-SVPDPASLYADLIALILRLAKHG  225 (397)
T ss_dssp             CEEEE--ETTEEEEECCS--CEEGGGCC-CCSCHHHHHHHHHHHHHHHHHTT
T ss_pred             eeeec--cCceEEEEecC--CccHhhhc-ccHHHHHHHHHHHHHHHHHHHCC
Confidence            88754  56899999998  34555422 22223478899999999999764

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=96.91  E-value=0.011  Score=47.59  Aligned_cols=110  Identities=15%  Similarity=0.005  Sum_probs=74.9

Q ss_pred             Ccc-eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCC
Q 045250           33 DDL-TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTM  109 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~  109 (165)
                      .++ -.+.||.|....||++...+..+.||.-.....     -.-...+...|+++|+.+..  |. +++++.  .+...
T Consensus        37 ~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--p~-iv~~~~~~~~~~~  108 (309)
T 3p86_A           37 CDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDF-----HAERVNEFLREVAIMKRLRH--PN-IVLFMGAVTQPPN  108 (309)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCC-----SHHHHHHHHHHHHHHHHCCC--TT-BCCEEEEECSTTC
T ss_pred             hHceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCC-----CHHHHHHHHHHHHHHHhCCC--CC-EeeEEEEEEECCc
Confidence            344 467899999999999987544899997542211     01123466778888888752  44 444443  34556


Q ss_pred             ceEEEecCCCCchHHHHHHHcCC----CC----HHHHHHHHHHHHHHHhcc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGI----KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~----~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ..+|||+++  ..+|.+.+....    ..    -.++.+|...|+.+|...
T Consensus       109 ~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  157 (309)
T 3p86_A          109 LSIVTEYLS--RGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN  157 (309)
T ss_dssp             CEEEEECCT--TCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred             eEEEEecCC--CCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence            789999998  347777776643    22    247889999999999875

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=96.91  E-value=0.005  Score=52.46  Aligned_cols=104  Identities=17%  Similarity=0.072  Sum_probs=76.2

Q ss_pred             eEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEe
Q 045250           37 IKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMR  115 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vME  115 (165)
                      .+.||.|....||++...++ .|.||.-.+-        ....++...|+++|+.+..  |..+.-.-.+..+...+|||
T Consensus       193 ~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~--------~~~~~~~~~E~~~l~~l~h--~~iv~l~~~~~~~~~~lv~e  262 (454)
T 1qcf_A          193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPG--------SMSVEAFLAEANVMKTLQH--DKLVKLHAVVTKEPIYIITE  262 (454)
T ss_dssp             EEEEECCSSEEEEEEEETTTEEEEEEEECTT--------SBCHHHHHHHHHHHTTCCC--TTBCCEEEEECSSSCEEEEC
T ss_pred             EEEcccCCceEEEEEEECCccEEEEEEecCC--------CccHHHHHHHHHHHhhCCC--CCEeeEEEEEeCCccEEEEe
Confidence            46899999999999998766 8999986531        1356788899999987742  55454444455677889999


Q ss_pred             cCCCCchHHHHHHHcC---CCC----HHHHHHHHHHHHHHHhcc
Q 045250          116 YLEPPHIILRKGLIAG---IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       116 dl~~~~~~lr~~l~~g---~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +++  ..+|.+.|...   ...    -.++.+|...|+-+|...
T Consensus       263 ~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  304 (454)
T 1qcf_A          263 FMA--KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN  304 (454)
T ss_dssp             CCT--TCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ecC--CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            998  34777777643   222    257889999999999753

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=96.90  E-value=0.008  Score=46.54  Aligned_cols=108  Identities=16%  Similarity=0.161  Sum_probs=71.7

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -++.+|.|....||++.+. +| .++||.......     -.....+...|...+..+... |. +++++.  .+.+...
T Consensus        15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~e~~~~~~l~~h-~~-iv~~~~~~~~~~~~~   87 (289)
T 1x8b_A           15 ELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLA-----GSVDEQNALREVYAHAVLGQH-SH-VVRYFSAWAEDDHML   87 (289)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCT-----TSHHHHHHHHHHHHHHHSCSC-TT-BCCEEEEEEETTEEE
T ss_pred             hhhhhcCCCceEEEEEEEcCCCceEEEEEeccccc-----ccHHHHHHHHHHHHHHHhCCC-CC-eeeeeeeeecCCeEE
Confidence            4678999999999999986 45 899997543221     112345566666666665432 33 344443  4567788


Q ss_pred             EEEecCCCCchHHHHHHHcC-----CCC----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAG-----IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g-----~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  +.+|.+.+.+.     ...    -.++.+|...|+-+|...
T Consensus        88 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~  135 (289)
T 1x8b_A           88 IQNEYCN--GGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS  135 (289)
T ss_dssp             EEEECCT--TCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEecC--CCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999997  35777776552     222    257888999999999763

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=96.88  E-value=0.0081  Score=47.80  Aligned_cols=105  Identities=16%  Similarity=0.140  Sum_probs=73.1

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -.+.||.|....||++.+. +| .+++|.-...-       .-..++...|+++|+.+.  -| ++++++.  .+.....
T Consensus        14 ~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~-------~~~~~~~~~E~~~l~~l~--hp-~iv~~~~~~~~~~~~~   83 (310)
T 3s95_A           14 HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD-------EETQRTFLKEVKVMRCLE--HP-NVLKFIGVLYKDKRLN   83 (310)
T ss_dssp             EEEEEECCSSEEEEEEEETTTCCEEEEEEESCCC-------HHHHHHHHHHHHHHTTCC--CT-TBCCEEEEEEETTEEE
T ss_pred             ccceecCCCCEEEEEEEECCCCcEEEEEEeccCC-------HHHHHHHHHHHHHHHhCC--Cc-CcccEEEEEecCCeeE
Confidence            5678999999999999986 45 78889653321       122356777888887664  23 4444544  3566778


Q ss_pred             EEEecCCCCchHHHHHHHcC-CCC-----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAG-IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g-~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  +.+|.+.+... ..+     -.++.+|...|+-+|...
T Consensus        84 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~  128 (310)
T 3s95_A           84 FITEYIK--GGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN  128 (310)
T ss_dssp             EEEECCT--TCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEecC--CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999998  45788877662 222     257888999999999764

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=96.87  E-value=0.0094  Score=46.45  Aligned_cols=105  Identities=16%  Similarity=0.115  Sum_probs=73.3

Q ss_pred             eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~  111 (165)
                      -.+.+|.|....||++.+.. + .+++|.-.....       -..++...|+++|+.+..  | ++++++.+  +.....
T Consensus        13 ~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~-------~~~~~~~~E~~~l~~l~h--~-~i~~~~~~~~~~~~~~   82 (277)
T 3f3z_A           13 LENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV-------EDVDRFKQEIEIMKSLDH--P-NIIRLYETFEDNTDIY   82 (277)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-------SCHHHHHHHHHHHHTCCC--T-TBCCEEEEEECSSEEE
T ss_pred             eeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc-------chHHHHHHHHHHHHhCCC--C-CEeeEEEEEecCCeEE
Confidence            45678999999999998864 4 788886543322       235788889999987732  3 44555544  455568


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  ...|.+.+..+..+     -.++.+|...|..+|...
T Consensus        83 lv~e~~~--~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~  126 (277)
T 3f3z_A           83 LVMELCT--GGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLN  126 (277)
T ss_dssp             EEEECCC--SCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeccC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997  34676766654432     257888889999999753

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=96.86  E-value=0.026  Score=46.31  Aligned_cols=105  Identities=16%  Similarity=0.054  Sum_probs=72.6

Q ss_pred             eEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC
Q 045250           37 IKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DR  107 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~  107 (165)
                      +++||.|..--||+....      ++ .|.||.-.....      .-..++...|+.+|+.+.-  |..| ++|.+  +.
T Consensus        31 ~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~------~~~~~~f~~E~~il~~l~H--pNIV-~l~g~~~~~  101 (308)
T 4gt4_A           31 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE------GPLREEFRHEAMLRARLQH--PNVV-CLLGVVTKD  101 (308)
T ss_dssp             EEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CC------C-CHHHHHHHHHHHHHCCC--TTBC-CEEEEECSS
T ss_pred             eeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccC------hHHHHHHHHHHHHHHhCCC--CCCC-CcceEEEEC
Confidence            578999999999998752      34 688998543221      2234678889999987742  4433 45544  45


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCC-----------------CC----HHHHHHHHHHHHHHHhcc
Q 045250          108 TMSLIGMRYLEPPHIILRKGLIAGI-----------------KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 e~~~~vMEdl~~~~~~lr~~l~~g~-----------------~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +...+||||++  ..+|++.|....                 ..    -.++.+|+..|.-+|...
T Consensus       102 ~~~~lV~Ey~~--~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~  165 (308)
T 4gt4_A          102 QPLSMIFSYCS--HGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH  165 (308)
T ss_dssp             SSCEEEEECCS--SCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEEEEcCC--CCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            66789999998  458888886421                 11    258899999999999754

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=96.86  E-value=0.0082  Score=51.13  Aligned_cols=104  Identities=19%  Similarity=0.085  Sum_probs=74.4

Q ss_pred             eEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEe
Q 045250           37 IKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMR  115 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vME  115 (165)
                      .+.||.|..-.||++...++ .|+||...+-        ....++...|+++|+.+..  |..++-.-.+..+...+|||
T Consensus       189 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~--------~~~~~~~~~E~~~l~~l~h--p~iv~~~~~~~~~~~~iv~e  258 (452)
T 1fmk_A          189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG--------TMSPEAFLQEAQVMKKLRH--EKLVQLYAVVSEEPIYIVTE  258 (452)
T ss_dssp             EEEEEECSSCEEEEEEETTTEEEEEEECCTT--------SSCHHHHHHHHHHHHHCCC--TTBCCEEEEECSSSCEEEEC
T ss_pred             eeeecCCCCeEEEEEEECCCceEEEEEeccC--------CCCHHHHHHHHHHHHhCCC--CCEeeEEEEEcCCceEEEeh
Confidence            46799999999999998866 7999976532        1345788899999988742  44444333345567789999


Q ss_pred             cCCCCchHHHHHHHc--CC-CC----HHHHHHHHHHHHHHHhcc
Q 045250          116 YLEPPHIILRKGLIA--GI-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       116 dl~~~~~~lr~~l~~--g~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +++  ..+|.+.|..  +. ..    -.++.+|...|+-+|...
T Consensus       259 ~~~--~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~  300 (452)
T 1fmk_A          259 YMS--KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN  300 (452)
T ss_dssp             CCT--TCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hhc--CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            998  3477777753  22 22    267889999999999753

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=96.86  E-value=0.0016  Score=50.29  Aligned_cols=110  Identities=13%  Similarity=-0.016  Sum_probs=73.5

Q ss_pred             Ccc-eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC--
Q 045250           33 DDL-TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DR--  107 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~--  107 (165)
                      +.+ -.+.+|.|....||++...+..++||.-......     .-...+...|+++|+.+.   -.++.+++.+  ++  
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~-----~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~   81 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWS-----TRKSRDFNEECPRLRIFS---HPNVLPVLGACQSPPA   81 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCTTCC-----HHHHHHHHHHGGGGCCCS---CTTEECEEEEECTTTS
T ss_pred             HHhHHHHHhcCCCcceEEEEEECCeeEEEEEecccccC-----HHHHHHHHHHHHHHHhcC---CCchhheEEEEccCCC
Confidence            344 5778999999999999987448999986532110     111234555555555442   3345666665  44  


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCC---C----HHHHHHHHHHHHHHHhcc
Q 045250          108 TMSLIGMRYLEPPHIILRKGLIAGIK---Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 e~~~~vMEdl~~~~~~lr~~l~~g~~---~----~~~a~~iG~~La~~h~~t  152 (165)
                      ....+|||+++  +.+|++.+.....   .    -.++.+|...|+-+|...
T Consensus        82 ~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  131 (271)
T 3kmu_A           82 PHPTLITHWMP--YGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLE  131 (271)
T ss_dssp             SSCEEEEECCT--TCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSS
T ss_pred             CCeEeeecccC--CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            55689999998  4588888877542   2    257888899999999754

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=96.83  E-value=0.0039  Score=51.70  Aligned_cols=108  Identities=14%  Similarity=0.028  Sum_probs=74.3

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      -++.||.|..-.||++... +| .+.||.-....-.. .   -..++...|.++|+.+.-  |. +.++|  +.|.++..
T Consensus        36 i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~-~---~~~~~~~~E~~il~~l~H--pn-Iv~l~~~~~~~~~~y  108 (311)
T 4aw0_A           36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-E---NKVPYVTRERDVMSRLDH--PF-FVKLYFTFQDDEKLY  108 (311)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH-T---TCHHHHHHHHHHHTTCCC--TT-BCCEEEEEECSSEEE
T ss_pred             EEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCC-H---HHHHHHHHHHHHHHhCCC--CC-CCeEEEEEEeCCEEE
Confidence            3578999999999999875 45 78889754321111 1   235788899999987742  43 34444  34667778


Q ss_pred             EEEecCCCCchHHHHHHHcC-CCCH----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAG-IKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g-~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  +..|.+.+.+. ...+    .++.+|...|.-+|...
T Consensus       109 ivmEy~~--gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~  152 (311)
T 4aw0_A          109 FGLSYAK--NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG  152 (311)
T ss_dssp             EEECCCT--TEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  45787877664 3333    46678888888888653

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=96.82  E-value=0.013  Score=46.94  Aligned_cols=106  Identities=17%  Similarity=0.151  Sum_probs=71.9

Q ss_pred             eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~  112 (165)
                      -++.||.|....||++.+.+| .++||.-.....     -.-...+...|.++|+.+..  | ++++++.+  +.....+
T Consensus        25 ~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--p-~iv~~~~~~~~~~~~~l   96 (311)
T 3niz_A           25 KLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAE-----DEGIPSTAIREISLLKELHH--P-NIVSLIDVIHSERCLTL   96 (311)
T ss_dssp             EEEEEEECSSCEEEEEEETTSCEEEEEEEC-----------CHHHHHHHHHHHHHHCCC--T-TBCCEEEEECCSSCEEE
T ss_pred             hhhhccCCCCeEEEEEEECCCCEEEEEEEecccc-----cchhhHHHHHHHHHHHHcCC--C-CEeeeeeEEccCCEEEE
Confidence            578899999999999999777 899997643221     11223567788888888742  3 44455543  4556689


Q ss_pred             EEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||+++  . .+.+.+....  ..    -.++.+|...|+-+|...
T Consensus        97 v~e~~~--~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  139 (311)
T 3niz_A           97 VFEFME--K-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR  139 (311)
T ss_dssp             EEECCS--E-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEcCCC--C-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999998  3 5666666543  22    246788889999999653

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=96.82  E-value=0.0065  Score=49.68  Aligned_cols=107  Identities=15%  Similarity=0.122  Sum_probs=73.6

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~  111 (165)
                      -++.+|.|....||++.+. +| .++||.-.....     -+-...|...|.++|+.+..  | ++++++.+  +.....
T Consensus        19 ~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--p-nIv~l~~~~~~~~~~~   90 (328)
T 3fe3_A           19 LLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-----NPTSLQKLFREVRIMKILNH--P-NIVKLFEVIETEKTLY   90 (328)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-----CHHHHHHHHHHHHHHHHCCC--T-TBCCEEEEEECSSEEE
T ss_pred             EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC-----CHHHHHHHHHHHHHHHhCCC--C-CEeeEEEEEEECCEEE
Confidence            5688999999999999974 55 899997543211     11234677889999887752  3 45555544  556678


Q ss_pred             EEEecCCCCchHHHHHHHcC-CCCH----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAG-IKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g-~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  ...|.+.+.+. ....    .++.+|...|.-+|...
T Consensus        91 lv~e~~~--~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~  134 (328)
T 3fe3_A           91 LIMEYAS--GGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR  134 (328)
T ss_dssp             EEECCCT--TCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEECCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997  34666666553 3322    57788888899999764

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=96.81  E-value=0.013  Score=46.07  Aligned_cols=104  Identities=19%  Similarity=0.006  Sum_probs=73.1

Q ss_pred             eccCCceeEEEEEEeC---CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 045250           39 EVGDGNLNFVYIVVGT---SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGM  114 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~---~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vM  114 (165)
                      .||.|....||++...   ++ .++||.-.....      ....++...|.++|+.+.  .|..++-.-.++.+...+||
T Consensus        17 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~~~~~lv~   88 (287)
T 1u59_A           17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE------KADTEEMMREAQIMHQLD--NPYIVRLIGVCQAEALMLVM   88 (287)
T ss_dssp             EEECCTTEEEEEEEEC---CCEEEEEEEECSSCC------HHHHHHHHHHHHHHHHCC--CTTBCCEEEEEESSSEEEEE
T ss_pred             cccccCceeEEEeEeccCCCcceEEEEecCCccc------hhHHHHHHHHHHHHHhCC--CCCEeEEEEEecCCCcEEEE
Confidence            7999999999999753   34 799998654211      123467778888888874  25555555555667788999


Q ss_pred             ecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250          115 RYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       115 Edl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      |+++  ..+|.+.+.+..  ..    -.++.+|...|..+|...
T Consensus        89 e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  130 (287)
T 1u59_A           89 EMAG--GGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN  130 (287)
T ss_dssp             ECCT--TEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EeCC--CCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9998  457888775422  22    257888889999999753

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=96.80  E-value=0.0049  Score=48.24  Aligned_cols=108  Identities=11%  Similarity=0.084  Sum_probs=72.9

Q ss_pred             eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~  111 (165)
                      -.+.+|.|....||++.+.. + .++||.........    .-...+...|.++|+.+.   -.++++++.+  +.....
T Consensus        13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~   85 (279)
T 3fdn_A           13 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEK----AGVEHQLRREVEIQSHLR---HPNILRLYGYFHDATRVY   85 (279)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH----HTCHHHHHHHHHHHTTCC---CTTBCCEEEEEECSSEEE
T ss_pred             EeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccch----hhHHHHHHHHHHHHHcCC---CCCCcchhheEecCCEEE
Confidence            46789999999999998764 4 79999764332110    122356777888877664   2345555554  555678


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  ...|.+.+.+...+     -.++.+|...|+.+|...
T Consensus        86 lv~e~~~--~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  129 (279)
T 3fdn_A           86 LILEYAP--LGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR  129 (279)
T ss_dssp             EEECCCT--TEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             EEEecCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999998  34666666654332     257788899999999653

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=96.80  E-value=0.013  Score=47.05  Aligned_cols=101  Identities=15%  Similarity=-0.017  Sum_probs=70.9

Q ss_pred             eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC------C
Q 045250           36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRT------M  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e------~  109 (165)
                      -.+.||.|....||++...+..++||.-.+.          ...+...|.++++...--.|. +++++.+..+      .
T Consensus        46 ~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~----------~~~~~~~e~~~~~~~~l~h~n-i~~~~~~~~~~~~~~~~  114 (342)
T 1b6c_B           46 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSR----------EERSWFREAEIYQTVMLRHEN-ILGFIAADNKDNGTWTQ  114 (342)
T ss_dssp             EEEEEEEETTEEEEEEEETTEEEEEEEECGG----------GHHHHHHHHHHHHHSCCCCTT-BCCEEEEEECCCSSCCC
T ss_pred             EEeeecCCCCcEEEEEEEcCccEEEEEeCch----------hHHHHHHHHHHHHHhhcCCCc-EEEEEeeecccCCccce
Confidence            4578899999999999986448999975321          235667888888775322243 4445544332      4


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHH
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTL  149 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h  149 (165)
                      ..+|||+++  ..+|.+.+.++....    .++.+|...|+.+|
T Consensus       115 ~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH  156 (342)
T 1b6c_B          115 LWLVSDYHE--HGSLFDYLNRYTVTVEGMIKLALSTASGLAHLH  156 (342)
T ss_dssp             EEEEECCCT--TCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEeecC--CCcHHHHHhccCccHHHHHHHHHHHHHHHHHHH
Confidence            689999998  457888887765432    57888899999999

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=96.80  E-value=0.0089  Score=46.47  Aligned_cols=108  Identities=16%  Similarity=0.024  Sum_probs=74.3

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -.+.+|.|....||++.+. +| .++||...+..... .   -..++...|...|+.+..  | ++++++.  .+.....
T Consensus        15 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~---~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~~~~   87 (276)
T 2h6d_A           15 LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRS-L---DVVGKIKREIQNLKLFRH--P-HIIKLYQVISTPTDFF   87 (276)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH-T---TCHHHHHHHHHHHHTCCC--T-TBCCEEEEEECSSEEE
T ss_pred             EEeeecCCCCeEEEEEEECCCCceEEEEEeccccccc-h---hHHHHHHHHHHHHhcCCC--C-CEeEEEEEEecCCeEE
Confidence            4578999999999999986 45 89999875433211 1   234677788888877642  3 3444444  3556778


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  ...|.+.+..+...     -.++.+|...|..+|...
T Consensus        88 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  131 (276)
T 2h6d_A           88 MVMEYVS--GGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM  131 (276)
T ss_dssp             EEEECCC--SCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             EEEeccC--CCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997  34777777654322     257888888899999753

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=96.79  E-value=0.004  Score=49.97  Aligned_cols=104  Identities=17%  Similarity=0.108  Sum_probs=71.1

Q ss_pred             eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~  112 (165)
                      ....+|.|....||++...+| .++||...+..       .-..++...|.++|+.+.   -.++++++.+  +.....+
T Consensus        43 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-------~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~l  112 (321)
T 2qkw_B           43 HKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES-------SQGIEEFETEIETLSFCR---HPHLVSLIGFCDERNEMIL  112 (321)
T ss_dssp             CCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC-------SSHHHHHHHHHHGGGSCC---CTTBCCEEEECCCTTCCEE
T ss_pred             ccceeecCCCeeEEEEEECCCCEEEEEEecccC-------hHHHHHHHHHHHHHHhCC---CCCEeeEEEEEcCCCeEEE
Confidence            456789999999999998766 89999754321       123456677777776553   2345555554  4456789


Q ss_pred             EEecCCCCchHHHHHHHcCC-----CC----HHHHHHHHHHHHHHHhc
Q 045250          113 GMRYLEPPHIILRKGLIAGI-----KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~-----~~----~~~a~~iG~~La~~h~~  151 (165)
                      |||+++  ...|.+.+....     ..    -.++.+|...|+.+|..
T Consensus       113 v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~  158 (321)
T 2qkw_B          113 IYKYME--NGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR  158 (321)
T ss_dssp             EEECCT--TCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEcCC--CCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC
Confidence            999997  346666664432     11    25788899999999975

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=96.79  E-value=0.01  Score=49.59  Aligned_cols=108  Identities=16%  Similarity=0.064  Sum_probs=74.9

Q ss_pred             eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~  112 (165)
                      -++.||.|....||++.+.+| .+.||.-.....     -.-..++...|.++|+.+....| ++.+++  ..+.+...+
T Consensus        60 ~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~Ei~~l~~l~~~~~-~iv~~~~~~~~~~~~~l  133 (390)
T 2zmd_A           60 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA-----DNQTLDSYRNEIAYLNKLQQHSD-KIIRLYDYEITDQYIYM  133 (390)
T ss_dssp             EEEEEECCSSEEEEEEECTTCCEEEEEEEECTTC-----CHHHHHHHHHHHHHHHHHTTTCT-TBCCEEEEEECSSEEEE
T ss_pred             EEEEEccCCCeEEEEEEcCCCCEEEEEEEecccc-----cHHHHHHHHHHHHHHHHcccCCC-eEEEEEEEEecCCEEEE
Confidence            457899999999999998777 788996532111     11234677889999988865334 455666  456677789


Q ss_pred             EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |||+.+   ..|.+.+......     ..++.+|...|.-+|...
T Consensus       134 v~E~~~---~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~  175 (390)
T 2zmd_A          134 VMECGN---IDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG  175 (390)
T ss_dssp             EEECCS---EEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             EEecCC---CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999433   4677777665432     246788889999999764

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=96.79  E-value=0.015  Score=45.88  Aligned_cols=107  Identities=15%  Similarity=-0.011  Sum_probs=74.4

Q ss_pred             eeEeccCCceeEEEEEEe------CCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--Ec
Q 045250           36 TIKEVGDGNLNFVYIVVG------TSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FD  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~------~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D  106 (165)
                      -.+.||.|....||++..      .++ .++||...+...      .-..++...|..+|+.+... | ++++++.  .+
T Consensus        27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-~-~i~~~~~~~~~   98 (313)
T 1t46_A           27 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH------LTEREALMSELKVLSYLGNH-M-NIVNLLGACTI   98 (313)
T ss_dssp             EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC------HHHHHHHHHHHHHHHHHCCC-T-TBCCEEEEECS
T ss_pred             HHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchh------HHHHHHHHHHHHHHhhcccC-C-CeeeEEEEEec
Confidence            467899999999999985      234 799998764321      11236777888888887543 3 3444443  46


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCC-------------------CC----HHHHHHHHHHHHHHHhcc
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLIAGI-------------------KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~~g~-------------------~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .+...+|||+++  ..+|.+.+....                   ..    -.++.+|...|+.+|...
T Consensus        99 ~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  165 (313)
T 1t46_A           99 GGPTLVITEYCC--YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN  165 (313)
T ss_dssp             SSSCEEEEECCT--TEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCcEEEEecCC--CCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            678899999997  457777776543                   21    257788899999999753

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=96.79  E-value=0.006  Score=48.84  Aligned_cols=105  Identities=12%  Similarity=-0.045  Sum_probs=71.9

Q ss_pred             eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~  112 (165)
                      ..+.||.|....||++...+| .++||.-......      -...+...|.++|+.+.   -.++++++.  .+.....+
T Consensus        34 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~~~l  104 (326)
T 3uim_A           34 NKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ------GGELQFQTEVEMISMAV---HRNLLRLRGFCMTPTERLL  104 (326)
T ss_dssp             STTEEECCSSSEEEEECCSSSCCEEEEECCC-----------CCCHHHHHHHGGGTCC---CTTBCCCCEEECCSSCCEE
T ss_pred             cceeEecCCCcEEEEEEecCCCEEEEEEeccccCc------hHHHHHHHHHHHHHhcc---CCCccceEEEEecCCceEE
Confidence            456899999999999987767 8999987643221      11236677877776554   233444443  36677889


Q ss_pred             EEecCCCCchHHHHHHHcCC-----CC----HHHHHHHHHHHHHHHhc
Q 045250          113 GMRYLEPPHIILRKGLIAGI-----KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~-----~~----~~~a~~iG~~La~~h~~  151 (165)
                      |||+++  ...|.+.+....     ..    -.++.+|...|+-+|..
T Consensus       105 v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~  150 (326)
T 3uim_A          105 VYPYMA--NGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDH  150 (326)
T ss_dssp             EEECCT--TCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred             EEEecc--CCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            999998  457777776543     11    36788899999999987

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=96.77  E-value=0.0095  Score=52.04  Aligned_cols=104  Identities=19%  Similarity=0.085  Sum_probs=74.5

Q ss_pred             eEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEEe
Q 045250           37 IKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMR  115 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vME  115 (165)
                      .+.||.|..-.||++...++ .|+||.-.+-        ....++...|+++|+.+..  |..+.-.-.+..+...+|||
T Consensus       272 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~--------~~~~~~~~~E~~~l~~l~h--pniv~~~~~~~~~~~~lv~e  341 (535)
T 2h8h_A          272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG--------TMSPEAFLQEAQVMKKLRH--EKLVQLYAVVSEEPIYIVTE  341 (535)
T ss_dssp             EEEEEECSSEEEEEEEETTTEEEEEEEECTT--------SSCHHHHHHHHHHHHHCCC--TTBCCEEEEECSSSCEEEEC
T ss_pred             heecccCCCeEEEEEEECCCceEEEEEeCCC--------CCCHHHHHHHHHHHHhCCC--CCEeeEEEEEeeccceEeee
Confidence            46799999999999998866 7999976431        1345788899999988752  44444333345567789999


Q ss_pred             cCCCCchHHHHHHHc--CC-CC----HHHHHHHHHHHHHHHhcc
Q 045250          116 YLEPPHIILRKGLIA--GI-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       116 dl~~~~~~lr~~l~~--g~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ++.  ...|.+.|..  +. ..    -.++.+|...|+-+|...
T Consensus       342 ~~~--~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~  383 (535)
T 2h8h_A          342 YMS--KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN  383 (535)
T ss_dssp             CCT--TEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hhc--CCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            998  3477777753  22 22    267889999999999753

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=96.76  E-value=0.0067  Score=50.23  Aligned_cols=109  Identities=13%  Similarity=0.066  Sum_probs=75.4

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -++.||.|..-.||++... +| .+.||.-.......    .-..++...|.++|+..... |. +++++.  .+.+...
T Consensus        27 ~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~----~~~~~~~~~E~~il~~~~~h-p~-Iv~l~~~~~~~~~~~  100 (353)
T 3txo_A           27 FIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQ----DDDVECTMTEKRILSLARNH-PF-LTQLFCCFQTPDRLF  100 (353)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH----HTTHHHHHHHHHHHHHTTTC-TT-BCCEEEEEECSSEEE
T ss_pred             EEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcc----hhHHHHHHHHHHHHHhccCC-Cc-eeeEEEEEEeCCEEE
Confidence            4678999999999999876 45 79999765432211    12456788899999877543 33 334433  3556678


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  +..|.+.+.+...+ .    .++.+|...|.-+|...
T Consensus       101 lv~E~~~--gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~g  144 (353)
T 3txo_A          101 FVMEFVN--GGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKG  144 (353)
T ss_dssp             EEEECCC--SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  34777777664433 2    46788888999999763

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=96.75  E-value=0.018  Score=45.12  Aligned_cols=103  Identities=16%  Similarity=0.109  Sum_probs=71.5

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--CCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD--RTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--~e~~~  111 (165)
                      -.+.||.|....||++.+. +| .++||.-...         ...++...|.++|+.+..  +..+|.+..+.  .....
T Consensus        13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---------~~~~~~~~e~~~l~~l~~--~~~i~~~~~~~~~~~~~~   81 (296)
T 3uzp_A           13 LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVK---------TKHPQLHIESKIYKMMQG--GVGIPTIRWCGAEGDYNV   81 (296)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTEEEEEEEEESC---------SSCCHHHHHHHHHHHHTT--STTCCCEEEEEEETTEEE
T ss_pred             EEEEEccCCCeEEEEEEEcCCCcEEEEEEecCC---------cchhHHHHHHHHHHHhhc--CCCCCccccccCCCCceE
Confidence            5678999999999999974 55 8999963221         122467889999988865  44556665553  44457


Q ss_pred             EEEecCCCCchHHHHHHHc--CCCC----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIA--GIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~--g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++   .+|.+.+..  +...    -.++.+|...|+-+|...
T Consensus        82 lv~e~~~---~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  125 (296)
T 3uzp_A           82 MVMELLG---PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN  125 (296)
T ss_dssp             EEEECCC---CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEecC---CCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999996   256666652  2232    257788888999999753

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=96.75  E-value=0.0087  Score=47.68  Aligned_cols=109  Identities=12%  Similarity=0.011  Sum_probs=75.3

Q ss_pred             eeEeccCCceeEEEEEEeC--CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-------
Q 045250           36 TIKEVGDGNLNFVYIVVGT--SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-------  105 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~--~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-------  105 (165)
                      -++.||.|....||++.+.  +| .++||.-......  .   -...+...|.++|+.+..+--.++++++.+       
T Consensus        15 ~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~--~---~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~   89 (326)
T 1blx_A           15 CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE--E---GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   89 (326)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCT--T---SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             eeeeecccccEEEEEEEecCCCCEEEEEEEeccCccc--c---cCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccC
Confidence            5788999999999999983  45 6889976543321  1   122356678888888876544456666654       


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 045250          106 DRTMSLIGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~e~~~~vMEdl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +.....+|||+++ .  .|.+.+....   ..    -.++.+|...|..+|...
T Consensus        90 ~~~~~~lv~e~~~-~--~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g  140 (326)
T 1blx_A           90 RETKLTLVFEHVD-Q--DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR  140 (326)
T ss_dssp             SEEEEEEEEECCS-C--BHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCceEEEEEecCC-C--CHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            4566789999998 3  6777666532   22    257788899999999763

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=96.75  E-value=0.012  Score=49.00  Aligned_cols=110  Identities=13%  Similarity=0.048  Sum_probs=76.4

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -.+.||.|....||++... +| .+.||.-...... ...-....++...|..+|+.+..  | ++++++.  .+.....
T Consensus        16 ~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~-~~~~~~~~~~~~~E~~il~~l~h--p-nIv~l~~~~~~~~~~~   91 (361)
T 2yab_A           16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSR-ASRRGVCREEIEREVSILRQVLH--P-NIITLHDVYENRTDVV   91 (361)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSST-TCSSSBCHHHHHHHHHHHTTCCC--T-TBCCEEEEEECSSEEE
T ss_pred             EeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccc-cccchhHHHHHHHHHHHHHhCCC--c-CCCcEEEEEEeCCEEE
Confidence            4678999999999999886 45 7888976544321 12223456778889988877642  3 3444544  3556678


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      +|||+++  +..|.+.+.+...+     -.++.+|...|.-+|..
T Consensus        92 lv~e~~~--gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~  134 (361)
T 2yab_A           92 LILELVS--GGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK  134 (361)
T ss_dssp             EEEECCC--SCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEcCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999997  35787877665433     25778888889889865

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=96.74  E-value=0.012  Score=46.03  Aligned_cols=111  Identities=21%  Similarity=0.112  Sum_probs=74.8

Q ss_pred             CCcc-eeEeccCCceeEEEEEEeCC--C---eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE
Q 045250           32 FDDL-TIKEVGDGNLNFVYIVVGTS--G---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF  105 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rV~~~~--g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~  105 (165)
                      .+.+ -.+.+|.|....||++...+  +   .++||...+...      .-..++...|.++|+.+.  .|..++-.-.+
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~   82 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCT------LDNKEKFMSEAVIMKNLD--HPHIVKLIGII   82 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSC------HHHHHHHHHHHHHHHHHC--CTTBCCEEEEE
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccC------chHHHHHHHHHHHHHhCC--CCCcceEEEEE
Confidence            3444 45779999999999997542  2   489998764321      112467778888888874  25544444445


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250          106 DRTMSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~e~~~~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ..+...+|||+++  +..|.+.+....  ..    -.++.+|...|..+|...
T Consensus        83 ~~~~~~~v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  133 (281)
T 3cc6_A           83 EEEPTWIIMELYP--YGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN  133 (281)
T ss_dssp             CSSSCEEEEECCT--TCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCCCCEEEEecCC--CCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            5667789999998  357777775532  22    246778899999999754

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=96.73  E-value=0.013  Score=48.55  Aligned_cols=104  Identities=15%  Similarity=0.080  Sum_probs=70.5

Q ss_pred             eEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC
Q 045250           37 IKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DR  107 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~  107 (165)
                      .++||.|..--||++...      ++ .|.||.-..--       .-..++...|+++|+.+.-  | ++-++|.+  +.
T Consensus        46 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-------~~~~~~f~~E~~il~~l~H--p-nIV~l~g~~~~~  115 (329)
T 4aoj_A           46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-------ESARQDFQREAELLTMLQH--Q-HIVRFFGVCTEG  115 (329)
T ss_dssp             EEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS-------HHHHHHHHHHHHHHTTCCC--T-TBCCEEEEECSS
T ss_pred             EEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC-------HHHHHHHHHHHHHHHhCCC--C-CCCcEEEEEEEC
Confidence            467999999999999753      34 68889743211       1123566778888877632  4 34455554  45


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCC----------------CC----HHHHHHHHHHHHHHHhcc
Q 045250          108 TMSLIGMRYLEPPHIILRKGLIAGI----------------KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 e~~~~vMEdl~~~~~~lr~~l~~g~----------------~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +...+||||++  ..+|++.|.+..                ..    -.++.+|+..|+-+|...
T Consensus       116 ~~~~lV~Ey~~--~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~  178 (329)
T 4aoj_A          116 RPLLMVFEYMR--HGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH  178 (329)
T ss_dssp             SSEEEEEECCT--TCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEEEEcCC--CCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            66789999998  458888776532                11    258889999999999753

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=96.72  E-value=0.019  Score=46.27  Aligned_cols=107  Identities=14%  Similarity=0.023  Sum_probs=73.2

Q ss_pred             eeEeccCCceeEEEEEEeC--------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--
Q 045250           36 TIKEVGDGNLNFVYIVVGT--------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--  104 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~--------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--  104 (165)
                      -.+.||.|....||++...        ++ .++||.......      .-...+...|.++|+.+... |. +++++.  
T Consensus        39 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-p~-iv~~~~~~  110 (334)
T 2pvf_A           39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT------EKDLSDLVSEMEMMKMIGKH-KN-IINLLGAC  110 (334)
T ss_dssp             EEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCC------HHHHHHHHHHHHHHHHHCCC-TT-BCCEEEEE
T ss_pred             EeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCc------HHHHHHHHHHHHHHHHhhcC-CC-EeeEEEEE
Confidence            4588999999999999863        23 689998753321      12245677888888887543 33 444443  


Q ss_pred             EcCCCceEEEecCCCCchHHHHHHHcCC-----------------CC----HHHHHHHHHHHHHHHhcc
Q 045250          105 FDRTMSLIGMRYLEPPHIILRKGLIAGI-----------------KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       105 ~D~e~~~~vMEdl~~~~~~lr~~l~~g~-----------------~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .+.....+|||+++  ..+|++.+....                 ..    -.++.+|...|+.+|...
T Consensus       111 ~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  177 (334)
T 2pvf_A          111 TQDGPLYVIVEYAS--KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK  177 (334)
T ss_dssp             CSSSCCEEEEECCT--TCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccCCceEEEEECCC--CCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            35567789999998  358888887643                 11    247888999999999763

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=96.71  E-value=0.01  Score=48.04  Aligned_cols=110  Identities=16%  Similarity=0.091  Sum_probs=67.9

Q ss_pred             eeEeccCCceeEEEEEEeC----CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EEcCCC
Q 045250           36 TIKEVGDGNLNFVYIVVGT----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY-HFDRTM  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~D~e~  109 (165)
                      -++.||.|..-.||++...    +| .+.||.........   -.-...+...|.++|+.+..  |..++-+. +.+.+.
T Consensus        21 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~~~E~~~l~~l~h--p~iv~~~~~~~~~~~   95 (327)
T 3a62_A           21 LLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVR---NAKDTAHTKAERNILEEVKH--PFIVDLIYAFQTGGK   95 (327)
T ss_dssp             EEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC-----------------HHHHHHHCCC--TTBCCEEEEEECSSC
T ss_pred             EEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhh---hhhHHHHHHHHHHHHHhCCC--CCccceeEEEEcCCE
Confidence            5678999999999999873    45 78999876432110   11234566778888887752  44333322 335567


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      ..+|||+++  +..|.+.+.....+ .    .++.+|...|.-+|...
T Consensus        96 ~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~  141 (327)
T 3a62_A           96 LYLILEYLS--GGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG  141 (327)
T ss_dssp             EEEEEECCT--TEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEeCCC--CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            789999997  34777777654332 2    46778888999999753

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=96.71  E-value=0.014  Score=47.11  Aligned_cols=105  Identities=15%  Similarity=0.129  Sum_probs=73.1

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      ..+.||.|....||++.+. +| .|+||.-.+..       .-..++...|..+|+.+..  |. +.+++  +.+.+...
T Consensus        49 ~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~-------~~~~~~~~~E~~~l~~l~h--~n-iv~~~~~~~~~~~~~  118 (321)
T 2c30_A           49 SYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK-------QQRRELLFNEVVIMRDYQH--FN-VVEMYKSYLVGEELW  118 (321)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-------CCSHHHHHHHHHHHTTCCC--TT-BCCEEEEEEETTEEE
T ss_pred             ccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc-------hhHHHHHHHHHHHHHhCCC--CC-cceEEEEEEECCEEE
Confidence            4568999999999999986 56 89999754221       2335677788888876642  33 33333  34567788


Q ss_pred             EEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  +..|.+.+.++....    .++.+|...|.-+|...
T Consensus       119 lv~e~~~--~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~~  161 (321)
T 2c30_A          119 VLMEFLQ--GGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQG  161 (321)
T ss_dssp             EEECCCC--SCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecCC--CCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  357777776555433    57778888888888753

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=96.70  E-value=0.013  Score=49.93  Aligned_cols=106  Identities=12%  Similarity=0.096  Sum_probs=73.2

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--------
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--------  105 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--------  105 (165)
                      -++.||.|..-.||++.+. +| .|.||.-....     ...-...|...|.++|+.+..  | ++-++|.+        
T Consensus        58 ~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~-----~~~~~~~~~~~Ei~il~~l~H--p-nIv~l~~~~~~~~~~~  129 (398)
T 4b99_A           58 IIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF-----DVVTNAKRTLRELKILKHFKH--D-NIIAIKDILRPTVPYG  129 (398)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEETTTT-----SSHHHHHHHHHHHHHHHHCCC--T-TBCCEEEECCCSSCTT
T ss_pred             EEEEEecccCeEEEEEEECCCCCEEEEEEECccc-----cchHHHHHHHHHHHHHHhcCC--C-CcceEeeeeecccccc
Confidence            4678999999999999875 56 79999743111     112234678889999988752  3 34455543        


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          106 DRTMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~e~~~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      |...-.+||||++  + .|.+.+.+...+     ..++.+|...|.-+|...
T Consensus       130 ~~~~~~ivmE~~~--g-~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~  178 (398)
T 4b99_A          130 EFKSVYVVLDLME--S-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ  178 (398)
T ss_dssp             TCCCEEEEEECCS--E-EHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCCEEEEEEeCCC--C-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCc
Confidence            3345579999997  3 477877765543     257788888999998753

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=96.68  E-value=0.0039  Score=51.26  Aligned_cols=110  Identities=16%  Similarity=0.124  Sum_probs=73.0

Q ss_pred             eeEeccCCceeEEEEEEeC----CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EEcCCC
Q 045250           36 TIKEVGDGNLNFVYIVVGT----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY-HFDRTM  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~D~e~  109 (165)
                      -++.||.|....||++...    +| .+.||.........   ..-..++...|.++|+.+... |..++-.. +.+...
T Consensus        58 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~~~E~~~l~~l~~h-~~iv~~~~~~~~~~~  133 (355)
T 1vzo_A           58 LLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQ---KAKTTEHTRTERQVLEHIRQS-PFLVTLHYAFQTETK  133 (355)
T ss_dssp             EEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEE---EESSGGGCCCHHHHHHHHHTC-TTBCCEEEEEEETTE
T ss_pred             EEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhh---hhhHHHHHHHHHHHHHHccCC-CceeEEEEEEeeCce
Confidence            4567899999999999873    45 79999865432110   113345667799999887643 43333322 234556


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      ..+|||+++  ...|.+.+.....+     -.++.+|...|.-+|..
T Consensus       134 ~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~  178 (355)
T 1vzo_A          134 LHLILDYIN--GGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL  178 (355)
T ss_dssp             EEEEECCCC--SCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEeecCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            779999998  34777777654432     24677888899999975

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=96.68  E-value=0.016  Score=45.67  Aligned_cols=106  Identities=14%  Similarity=0.051  Sum_probs=70.7

Q ss_pred             eeEeccCCceeEEEEEEe-----CCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC
Q 045250           36 TIKEVGDGNLNFVYIVVG-----TSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DR  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~-----~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~  107 (165)
                      -++.+|.|....||++..     .+| .++||.-.+...      .-...+...|.++|+.+..  | ++++++.+  +.
T Consensus        25 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~-~i~~~~~~~~~~   95 (302)
T 4e5w_A           25 RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG------GNHIADLKKEIEILRNLYH--E-NIVKYKGICTED   95 (302)
T ss_dssp             EEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----------CCHHHHHHHHHHHHTCCC--T-TBCCEEEEEEC-
T ss_pred             hhhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc------chhHHHHHHHHHHHHhCCC--C-CeeeeeeEEecC
Confidence            568899999999999982     245 899998654321      2345778889998887742  3 44555443  33


Q ss_pred             --CCceEEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 045250          108 --TMSLIGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 --e~~~~vMEdl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t  152 (165)
                        ....+|||+++  +..|.+.+...  ...    -.++.+|...|+.+|...
T Consensus        96 ~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  146 (302)
T 4e5w_A           96 GGNGIKLIMEFLP--SGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ  146 (302)
T ss_dssp             --CCEEEEEECCT--TCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCceEEEEEEeCC--CCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCC
Confidence              33579999997  34777777432  222    257788899999999754

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=96.68  E-value=0.014  Score=45.55  Aligned_cols=104  Identities=18%  Similarity=0.096  Sum_probs=72.4

Q ss_pred             eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~  111 (165)
                      -.+.||.|....||++.+.. + .++||.-..-        ....++...|.++|+.+..  |. +++++.+  +.....
T Consensus        17 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~~~~~E~~~l~~l~h--~~-i~~~~~~~~~~~~~~   85 (288)
T 3kfa_A           17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED--------TMEVEEFLKEAAVMKEIKH--PN-LVQLLGVCTREPPFY   85 (288)
T ss_dssp             EEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC--------STHHHHHHHHHHHHHHCCC--TT-BCCEEEEECSSSSEE
T ss_pred             EEeecCCCCceeEEEeEecCCCEEEEEEecCcC--------HHHHHHHHHHHHHHHhCCC--CC-EeeEEEEEccCCCEE
Confidence            45679999999999999874 4 7999975421        1235677889888888852  43 4444443  445568


Q ss_pred             EEEecCCCCchHHHHHHHcCC---CCH----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGI---KYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~---~~~----~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  +.+|.+.+....   ...    .++.+|...|+.+|...
T Consensus        86 ~v~e~~~--~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~  131 (288)
T 3kfa_A           86 IITEFMT--YGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN  131 (288)
T ss_dssp             EEEECCT--TEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEcCC--CCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  457877776532   222    46678889999999653

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=96.67  E-value=0.023  Score=45.32  Aligned_cols=103  Identities=11%  Similarity=0.130  Sum_probs=71.3

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c--CCC
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--D--RTM  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D--~e~  109 (165)
                      -++.||.|....||++.+. +| .++||.-.+          ....+...|.++|+.+... | ++++++.+  +  ...
T Consensus        40 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~----------~~~~~~~~E~~~l~~l~~~-~-~i~~~~~~~~~~~~~~  107 (330)
T 3nsz_A           40 LVRKLGRGKYSEVFEAINITNNEKVVVKILKP----------VKKKKIKREIKILENLRGG-P-NIITLADIVKDPVSRT  107 (330)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEECS----------CCHHHHHHHHHHHHHHTTS-T-TBCCEEEEEECTTTCC
T ss_pred             EEEEecccCCeEEEEEEECCCCcEEEEEEecc----------cchHHHHHHHHHHHHcCCC-C-CEEEeeeeeccCCCCc
Confidence            5788999999999999875 45 899997542          2346788899999988643 3 34444433  3  344


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCC--CHHHHHHHHHHHHHHHhcc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGIK--YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~~--~~~~a~~iG~~La~~h~~t  152 (165)
                      ..+|||+++  ...|++.+..-..  .-.++.+|...|+-+|...
T Consensus       108 ~~lv~e~~~--~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  150 (330)
T 3nsz_A          108 PALVFEHVN--NTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMG  150 (330)
T ss_dssp             EEEEEECCC--CCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEEEeccC--chhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            689999998  3466665533111  1257888899999999753

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=96.65  E-value=0.0067  Score=47.87  Aligned_cols=106  Identities=22%  Similarity=0.171  Sum_probs=73.0

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~  111 (165)
                      -.+.||.|....||++.+. +| .++||......      -..+.++...|.++|+.+..  | ++++++.+  +.....
T Consensus        26 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~------~~~~~~~~~~E~~~l~~l~h--p-~iv~~~~~~~~~~~~~   96 (285)
T 3is5_A           26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR------SQVPMEQIEAEIEVLKSLDH--P-NIIKIFEVFEDYHNMY   96 (285)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG------CCSCHHHHHHHHHHHHTCCC--T-TBCCEEEEEECSSEEE
T ss_pred             ecceeccCCCeEEEEEEEccCCceEEEEEeeccc------cchhHHHHHHHHHHHHhCCC--c-hHHhHHHheecCCeEE
Confidence            5688999999999999986 45 78888754322      23456788889999987742  3 34445543  456678


Q ss_pred             EEEecCCCCchHHHHHHHc----CCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIA----GIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~----g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++ + ..|.+.+..    +...     -.++.+|...|..+|...
T Consensus        97 lv~e~~~-~-~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~  144 (285)
T 3is5_A           97 IVMETCE-G-GELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH  144 (285)
T ss_dssp             EEECCCS-C-CBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEeCC-C-CcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999998 2 355555532    2322     257788889999999653

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=96.65  E-value=0.018  Score=45.11  Aligned_cols=101  Identities=13%  Similarity=-0.024  Sum_probs=70.0

Q ss_pred             eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc------CCC
Q 045250           36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD------RTM  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D------~e~  109 (165)
                      -++.||.|..-.||++...+..++||.-.+.          ...+...|.++++...---| ++.+++.+.      ...
T Consensus        12 ~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~----------~~~~~~~e~~~~~~~~l~h~-niv~~~~~~~~~~~~~~~   80 (301)
T 3q4u_A           12 LLECVGKGRYGEVWRGSWQGENVAVKIFSSR----------DEKSWFRETELYNTVMLRHE-NILGFIASDMTSRHSSTQ   80 (301)
T ss_dssp             EEEEEEECSSEEEEEEEETTEEEEEEEECGG----------GHHHHHHHHHHHHHTCCCCT-TBCCEEEEEEEEETTEEE
T ss_pred             EEEeeccCCCcEEEEEEECCEEEEEEEeccc----------cchhhHHHHHHHHHhhccCc-CeeeEEEeeccccCCCce
Confidence            5788999999999999985448999974321          23456678887776432223 445555431      234


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHH
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTL  149 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h  149 (165)
                      ..+|||+++  ..+|.+.+..+....    .++.+|...|+-+|
T Consensus        81 ~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH  122 (301)
T 3q4u_A           81 LWLITHYHE--MGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLH  122 (301)
T ss_dssp             EEEEECCCT--TCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEehhhcc--CCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHH
Confidence            679999998  458888886655432    57888899999999

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=96.64  E-value=0.0098  Score=46.47  Aligned_cols=104  Identities=16%  Similarity=0.086  Sum_probs=70.2

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--------
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--------  105 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--------  105 (165)
                      -++.+|.|....||++.+. +| .++||.-..--        -..++...|.++|+.+..  |. +.+++.+        
T Consensus        10 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------~~~~~~~~E~~~l~~l~h--~~-i~~~~~~~~~~~~~~   78 (303)
T 1zy4_A           10 EIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE--------EKLSTILSEVMLLASLNH--QY-VVRYYAAWLERRNFV   78 (303)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH--------HHHHHHHHHHHHHTTCCC--TT-BCCEEEEEEECCCCC
T ss_pred             hhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH--------HHHHHHHHHHHHHHhcCc--hH-HHHHHHHHHhhcchh
Confidence            4678999999999999975 45 89999763211        123566678888776632  33 3444432        


Q ss_pred             -------cCCCceEEEecCCCCchHHHHHHHcCCC-C-----HHHHHHHHHHHHHHHhcc
Q 045250          106 -------DRTMSLIGMRYLEPPHIILRKGLIAGIK-Y-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 -------D~e~~~~vMEdl~~~~~~lr~~l~~g~~-~-----~~~a~~iG~~La~~h~~t  152 (165)
                             +.....+|||+++  +.+|.+.+.+... .     -.++.+|...|+.+|...
T Consensus        79 ~~~~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~  136 (303)
T 1zy4_A           79 KPMTAVKKKSTLFIQMEYCE--NGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQG  136 (303)
T ss_dssp             C------CEEEEEEEEECCC--SCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hhhcccccCCceEEEEecCC--CCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCC
Confidence                   2455679999997  3478887764332 1     247889999999999764

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=96.62  E-value=0.024  Score=44.24  Aligned_cols=103  Identities=17%  Similarity=0.152  Sum_probs=70.2

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~  111 (165)
                      -.+.||.|....||++.+. +| .++||......         ...+...|.++|+.+..  +..+|.+..+  +.+...
T Consensus        13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------~~~~~~~e~~~l~~l~~--~~~i~~~~~~~~~~~~~~   81 (296)
T 4hgt_A           13 LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT---------KHPQLHIESKIYKMMQG--GVGIPTIRWCGAEGDYNV   81 (296)
T ss_dssp             EEEEEEECSSSEEEEEEETTTTEEEEEEEEEC------------CCCHHHHHHHHHHHTT--STTCCCEEEEEEETTEEE
T ss_pred             EeeeecCCCCeEEEEEEEcCCCceEEEEeecccc---------cchHHHHHHHHHHHhcC--CCCCCeeeeecCCCCceE
Confidence            5678999999999999974 45 89999622111         11357778888888765  4455555554  455568


Q ss_pred             EEEecCCCCchHHHHHHHc--CCCC----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIA--GIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~--g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++.   +|.+.+..  +...    -.++.+|...|+-+|...
T Consensus        82 lv~e~~~~---~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~  125 (296)
T 4hgt_A           82 MVMELLGP---SLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN  125 (296)
T ss_dssp             EEEECCCC---BHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEccCC---CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999962   56666652  3332    257788888999999664

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=96.62  E-value=0.019  Score=45.08  Aligned_cols=113  Identities=12%  Similarity=0.059  Sum_probs=72.7

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCcccccc--CCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCC
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCI--GESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTM  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~--~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~  109 (165)
                      ..+.+|.|....||++.+. +| .++||.....-...  ..+.....++...|.++|+.+... |. +++++.+  +...
T Consensus        21 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h-~~-i~~~~~~~~~~~~   98 (298)
T 1phk_A           21 PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH-PN-IIQLKDTYETNTF   98 (298)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTC-TT-BCCEEEEEECSSE
T ss_pred             eeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCC-CC-EeeeeeeeccCCe
Confidence            5678999999999999986 45 79999864322100  000011234566788888777543 33 3444433  4455


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ..+|||+++  ...|.+.+.++...     -.++.+|...|..+|...
T Consensus        99 ~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  144 (298)
T 1phk_A           99 FFLVFDLMK--KGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN  144 (298)
T ss_dssp             EEEEEECCT--TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEeccC--CCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            789999998  34777777654332     257788888888898764

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=96.61  E-value=0.011  Score=46.17  Aligned_cols=105  Identities=14%  Similarity=0.076  Sum_probs=72.8

Q ss_pred             eeEeccCCceeEEEEEEeCC-C--------eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G--------SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-  105 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g--------svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-  105 (165)
                      -.+.||.|....||++.+.. +        .+++|.....-.       -..++...|+++|+.+.   -.++++++.+ 
T Consensus        12 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~-------~~~~~~~~E~~~l~~l~---h~~iv~~~~~~   81 (289)
T 4fvq_A           12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHR-------NYSESFFEAASMMSKLS---HKHLVLNYGVC   81 (289)
T ss_dssp             EEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGG-------GGHHHHHHHHHHHHTSC---CTTBCCEEEEE
T ss_pred             eeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccH-------HHHHHHHHHHHHHHhCC---CCCEeEEEEEE
Confidence            56789999999999998652 2        478887543221       23467778888887775   2344555554 


Q ss_pred             -cCCCceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250          106 -DRTMSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 -D~e~~~~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                       +.+...+|||+++  +.+|.+.+.+..  ..    -.++.+|...|+-+|...
T Consensus        82 ~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~  133 (289)
T 4fvq_A           82 VCGDENILVQEFVK--FGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENT  133 (289)
T ss_dssp             CCTTCCEEEEECCT--TCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EeCCCCEEEEECCC--CCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence             5677889999997  457777776643  22    257888899999999654

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=96.61  E-value=0.025  Score=46.75  Aligned_cols=107  Identities=14%  Similarity=0.017  Sum_probs=74.1

Q ss_pred             eeEeccCCceeEEEEEEeC--------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-
Q 045250           36 TIKEVGDGNLNFVYIVVGT--------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-  105 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~--------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-  105 (165)
                      -.+.||.|....||++...        ++ .++||.......      .-..++...|.++|+.+... | ++++++.+ 
T Consensus        85 ~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-p-nIv~~~~~~  156 (370)
T 2psq_A           85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT------EKDLSDLVSEMEMMKMIGKH-K-NIINLLGAC  156 (370)
T ss_dssp             EEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCB------HHHHHHHHHHHHHHHHSCCC-T-TBCCEEEEE
T ss_pred             eeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcC------HHHHHHHHHHHHHHHHhcCC-C-CEeeEEEEE
Confidence            3467999999999999752        23 588998754321      12345778899999887543 3 34555543 


Q ss_pred             -cCCCceEEEecCCCCchHHHHHHHcCCC-----------------C----HHHHHHHHHHHHHHHhcc
Q 045250          106 -DRTMSLIGMRYLEPPHIILRKGLIAGIK-----------------Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 -D~e~~~~vMEdl~~~~~~lr~~l~~g~~-----------------~----~~~a~~iG~~La~~h~~t  152 (165)
                       +.....+||||++  ..+|++.+.....                 .    -.++.+|...|.-+|...
T Consensus       157 ~~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  223 (370)
T 2psq_A          157 TQDGPLYVIVEYAS--KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK  223 (370)
T ss_dssp             CSSSSCEEEEECCT--TCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccCCCEEEEEEcCC--CCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             5567789999998  3478888776431                 1    247889999999999763

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=96.61  E-value=0.016  Score=45.08  Aligned_cols=108  Identities=14%  Similarity=0.054  Sum_probs=74.0

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~  111 (165)
                      -.+.+|.|....||++.+. +| .++||......... .   -...+...|.++|+.+..  | ++++++.+  +.....
T Consensus        15 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-~---~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~~~~   87 (278)
T 3cok_A           15 VGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYK-A---GMVQRVQNEVKIHCQLKH--P-SILELYNYFEDSNYVY   87 (278)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH-T---TCHHHHHHHHHHHTTBCC--T-TBCCEEEEEECSSEEE
T ss_pred             eeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhh-h---hHHHHHHHHHHHHHhCCC--C-CeEeEEEEEccCCeEE
Confidence            4678999999999999975 45 89999875433211 1   124677788888876642  3 44455443  555668


Q ss_pred             EEEecCCCCchHHHHHHHcC-C-CC----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAG-I-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g-~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  ...|.+.+... . ..    -.++.+|...|..+|...
T Consensus        88 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  132 (278)
T 3cok_A           88 LVLEMCH--NGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG  132 (278)
T ss_dssp             EEEECCT--TEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecCC--CCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997  35787777663 2 22    257888899999999753

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=96.61  E-value=0.015  Score=48.00  Aligned_cols=109  Identities=17%  Similarity=0.087  Sum_probs=74.9

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      -.+.||.|....||++... +| .++||.-.......    .-..++...|.++|+..... |. +++++  +.+.+...
T Consensus        21 ~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~~~~~~E~~il~~~~~h-p~-iv~l~~~~~~~~~~~   94 (345)
T 1xjd_A           21 LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLM----DDDVECTMVEKRVLSLAWEH-PF-LTHMFCTFQTKENLF   94 (345)
T ss_dssp             EEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHH----TTCHHHHHHHHHHHHHHTTC-TT-BCCEEEEEECSSEEE
T ss_pred             EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhh----hhhHHHHHHHHHHHHhcCCC-CC-CCcEEEEEEeCCEEE
Confidence            5678999999999999986 45 79999765432111    12456788899998876443 43 33333  34667778


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  +..|.+.+.+...+     ..++.+|...|.-+|...
T Consensus        95 lv~E~~~--gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  138 (345)
T 1xjd_A           95 FVMEYLN--GGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG  138 (345)
T ss_dssp             EEEECCT--TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997  34777777653332     247788889999999763

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=96.60  E-value=0.0064  Score=50.68  Aligned_cols=105  Identities=14%  Similarity=0.045  Sum_probs=73.4

Q ss_pred             eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--CC--C
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD--RT--M  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--~e--~  109 (165)
                      -.+.||.|....||++.+.. | .++||.-....      ..-..++...|+++|+.+.   -.++++++.+.  ..  .
T Consensus        13 i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~E~~~l~~l~---hpnIv~~~~~~~~~~~~~   83 (396)
T 4eut_A           13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS------FLRPVDVQMREFEVLKKLN---HKNIVKLFAIEEETTTRH   83 (396)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEECGGG------GGSCHHHHHHHHHHHHHCC---CTTBCCEEEEEECTTTCC
T ss_pred             EEEEEEcCCCeEEEEEEECCCCcEEEEEEecccc------ccchHHHHHHHHHHHHhcC---CCCCCeEEEeeccCCCCe
Confidence            56779999999999999873 5 89999764322      1234577788999998875   23455555443  22  3


Q ss_pred             ceEEEecCCCCchHHHHHHHcCC----CC----HHHHHHHHHHHHHHHhc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGI----KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~----~~----~~~a~~iG~~La~~h~~  151 (165)
                      ..+|||+++  +..|.+.+....    ..    -.++.+|...|+-+|..
T Consensus        84 ~~lv~e~~~--~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~  131 (396)
T 4eut_A           84 KVLIMEFCP--CGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN  131 (396)
T ss_dssp             EEEEECCCT--TEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eEEEEecCC--CCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            489999997  457777776532    22    25788889999999965

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=96.59  E-value=0.0084  Score=47.68  Aligned_cols=108  Identities=15%  Similarity=0.131  Sum_probs=72.2

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC--CCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR--TMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~--e~~~  111 (165)
                      -++.+|.|..-.||++.+. ++ .++||.-.....    .-.-...|...|...|+.+..  | ++++++.+..  ....
T Consensus        15 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~~~e~~~l~~l~h--p-~iv~~~~~~~~~~~~~   87 (294)
T 4eqm_A           15 IVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPR----EKEETLKRFEREVHNSSQLSH--Q-NIVSMIDVDEEDDCYY   87 (294)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSS----CCHHHHHHHHHHHHHHTTCCB--T-TBCCEEEEEECSSEEE
T ss_pred             EEEEEccCCCEEEEEEEECCCCCeEEEEEeccCcc----ccHHHHHHHHHHHHHHhcCCC--C-CCceEEEeeeeCCeEE
Confidence            5788999999999999876 44 799997532211    111223566777777766632  3 4555665544  3457


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  +.+|.+.+.+...+     -.++.+|...|+.+|...
T Consensus        88 lv~e~~~--g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  131 (294)
T 4eqm_A           88 LVMEYIE--GPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMR  131 (294)
T ss_dssp             EEEECCC--SCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeCCC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997  45787777664432     256778889999999754

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=96.58  E-value=0.017  Score=48.35  Aligned_cols=102  Identities=19%  Similarity=0.209  Sum_probs=69.6

Q ss_pred             eeEeccCCceeEEEEEEeC----CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCC
Q 045250           36 TIKEVGDGNLNFVYIVVGT----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV--YHFDRT  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~e  108 (165)
                      -.+.||.|..-.||++...    .+ .|.||+-.+.         -...|...|.++|+.+... |. +.++  .+.+.+
T Consensus        25 i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~---------~~~~~~~~E~~~l~~~~~h-~n-Iv~l~~~~~~~~   93 (361)
T 4f9c_A           25 IEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT---------SHPIRIAAELQCLTVAGGQ-DN-VMGVKYCFRKND   93 (361)
T ss_dssp             EEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT---------SCHHHHHHHHHHHHHTCSB-TT-BCCCSEEEEETT
T ss_pred             EEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc---------cCHHHHHHHHHHHHHhcCC-CC-CceEEEEEEECC
Confidence            4578999999999999753    34 6888864321         2346888899999887543 33 2222  234667


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250          109 MSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ...+||||++  +..|.+.+.  ...    ..++.+|...|.-+|...
T Consensus        94 ~~~lvmE~~~--g~~L~~~~~--~l~~~~~~~~~~qll~al~ylH~~g  137 (361)
T 4f9c_A           94 HVVIAMPYLE--HESFLDILN--SLSFQEVREYMLNLFKALKRIHQFG  137 (361)
T ss_dssp             EEEEEEECCC--CCCHHHHHT--TCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEEeCCC--cccHHHHHc--CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            7789999997  346766652  232    256778888888888653

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=96.58  E-value=0.016  Score=47.15  Aligned_cols=105  Identities=17%  Similarity=0.104  Sum_probs=72.4

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCC-----CCCceEEEE---
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCP-----DHVPEVYHF---  105 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p-----~~vP~v~~~---  105 (165)
                      -++.||.|....||++.+. +| .++||.-..-        ....++...|.++|+.+....+     .++.+++.+   
T Consensus        41 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~  112 (397)
T 1wak_A           41 VIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA--------EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI  112 (397)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECSC--------HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE
T ss_pred             EEEEeeecCCeeEEEEEecCCCeEEEEEEEecC--------CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee
Confidence            5678999999999999876 45 7999976421        1234677889999998875322     135555554   


Q ss_pred             ---cCCCceEEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhc
Q 045250          106 ---DRTMSLIGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       106 ---D~e~~~~vMEdl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~  151 (165)
                         +.....+|||+++  ...+ +.+....   ..    -.++.+|...|+-+|..
T Consensus       113 ~~~~~~~~~lv~e~~~--~~l~-~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~  165 (397)
T 1wak_A          113 SGVNGTHICMVFEVLG--HHLL-KWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTK  165 (397)
T ss_dssp             EETTEEEEEEEECCCC--CBHH-HHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCCCceEEEEEeccC--ccHH-HHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence               4567889999997  3344 4444321   22    25788899999999976

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=96.57  E-value=0.014  Score=47.23  Aligned_cols=100  Identities=16%  Similarity=0.185  Sum_probs=71.0

Q ss_pred             EeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceEE
Q 045250           38 KEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLIG  113 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~v  113 (165)
                      +.||.|....||++.+. +| .+.||.-...          ...+...|.++|+.+... |. +++++.  .|.....+|
T Consensus        17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----------~~~~~~~e~~~l~~l~~h-~n-iv~~~~~~~~~~~~~lv   84 (325)
T 3kn6_A           17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR----------MEANTQKEITALKLCEGH-PN-IVKLHEVFHDQLHTFLV   84 (325)
T ss_dssp             CCSEEETTEEEEEEEETTTCCEEEEEEEEGG----------GHHHHHHHHHHHHHTTTC-TT-BCCEEEEEECSSEEEEE
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEChh----------hhhhHHHHHHHHHHhcCC-CC-eeEEEEEEEcCCEEEEE
Confidence            57999999999999886 45 7999975322          235667788888887643 33 344443  355667899


Q ss_pred             EecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 045250          114 MRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      ||+++  +..|.+.+..+..+     -.++.+|...|+-+|..
T Consensus        85 ~e~~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~  125 (325)
T 3kn6_A           85 MELLN--GGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDV  125 (325)
T ss_dssp             ECCCC--SCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEccC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99997  34777777765533     25778888889999965

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=96.57  E-value=0.013  Score=45.80  Aligned_cols=108  Identities=14%  Similarity=0.157  Sum_probs=73.6

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~  111 (165)
                      -.+.+|.|....||++.+. ++ .++||......... .   -...+...|.++|+.+..  | ++++++.+  +.....
T Consensus        18 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~---~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~~~~   90 (284)
T 2vgo_A           18 IGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEK-E---GVEHQLRREIEIQSHLRH--P-NILRMYNYFHDRKRIY   90 (284)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHH-T---TCHHHHHHHHHHHHTCCC--T-TBCCEEEEEECSSEEE
T ss_pred             eeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccch-H---HHHHHHHHHHHHHhcCCC--C-CEeeEEEEEEcCCEEE
Confidence            5678999999999999886 34 79999865432111 1   234677788888887742  3 34444443  556778


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  ...|.+.+.....+     -.++.+|...|..+|...
T Consensus        91 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  134 (284)
T 2vgo_A           91 LMLEFAP--RGELYKELQKHGRFDEQRSATFMEELADALHYCHERK  134 (284)
T ss_dssp             EEECCCT--TEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             EEEEeCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997  34677777654322     257788888999999753

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=96.56  E-value=0.0078  Score=47.03  Aligned_cols=103  Identities=13%  Similarity=0.016  Sum_probs=70.3

Q ss_pred             eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC-CCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DR-TMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~-e~~~~  112 (165)
                      -++.+|.|....||++...+..++||....-         ...++...|.+.|+.+..  |. +.+++.+  +. ....+
T Consensus        25 ~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~---------~~~~~~~~E~~~l~~l~h--~~-iv~~~~~~~~~~~~~~l   92 (278)
T 1byg_A           25 LLQTIGKGEFGDVMLGDYRGNKVAVKCIKND---------ATAQAFLAEASVMTQLRH--SN-LVQLLGVIVEEKGGLYI   92 (278)
T ss_dssp             EEEEEEECSSCEEEEEEETTEEEEEEECCCC---------C--HHHHHTHHHHTTCCC--TT-BCCEEEEECCC--CCEE
T ss_pred             EEeEEecCCCceEEEEEEcCCEEEEEEecch---------hHHHHHHHHHHHHHhCCC--CC-EeeEEEEEEcCCCceEE
Confidence            5678999999999999876448999976421         134677888888877642  43 4445543  33 36789


Q ss_pred             EEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||+++  ..+|.+.+....   ..    -.++.+|...|+.+|...
T Consensus        93 v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  137 (278)
T 1byg_A           93 VTEYMA--KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN  137 (278)
T ss_dssp             EECCCT--TEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEecCC--CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999998  347777665432   11    257888999999999764

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=96.54  E-value=0.018  Score=46.73  Aligned_cols=101  Identities=16%  Similarity=0.019  Sum_probs=66.5

Q ss_pred             EeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCC------ce
Q 045250           38 KEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTM------SL  111 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~------~~  111 (165)
                      +.||.|..--||++...+..|.||.-...          .......|++++... .+--.++-+++.+..+.      ..
T Consensus         9 ~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~----------~~~~~~~e~Ei~~~~-~l~HpNIv~l~g~~~~~~~~~~~~~   77 (303)
T 3hmm_A            9 ESIGKGRFGEVWRGKWRGEEVAVKIFSSR----------EERSWFREAEIYQTV-MLRHENILGFIAADNKDNGTWTQLW   77 (303)
T ss_dssp             EEEEECSSSEEEEEEETTEEEEEEEECGG----------GHHHHHHHHHHHTST-TCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred             EEEeeCCCeEEEEEEECCEEEEEEEECcc----------chhhHHHHHHHHHHh-cCCCCCCCcEEEEEEecCCCceEEE
Confidence            57999999999999985338999963211          123445566655332 22222344555554322      36


Q ss_pred             EEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~  151 (165)
                      +||||++  +.+|++.|..+....    .++.+++..|+-+|..
T Consensus        78 lV~Ey~~--~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~  119 (303)
T 3hmm_A           78 LVSDYHE--HGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHME  119 (303)
T ss_dssp             EEEECCT--TCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCC
T ss_pred             EEecCCC--CCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            9999998  458888887766542    6788899999999965

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=96.54  E-value=0.012  Score=45.86  Aligned_cols=107  Identities=15%  Similarity=0.122  Sum_probs=71.3

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~  111 (165)
                      -.+.+|.|....||++.+. +| .++||.-......     .-...+...|+++|+.+..  | ++++++.+  +.....
T Consensus        10 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~~~~   81 (284)
T 3kk8_A           10 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-----ARDFQKLEREARICRKLQH--P-NIVRLHDSIQEESFHY   81 (284)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-----HHHHHHHHHHHHHHHHCCC--T-TBCCEEEEEECSSEEE
T ss_pred             hhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCC-----HHHHHHHHHHHHHHHHcCC--C-CcCeEEEEEEcCCEEE
Confidence            5678999999999999876 45 7888975432211     1123566678888887742  3 44455543  444558


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  ...|.+.+..+..+     -.++.+|...|+.+|...
T Consensus        82 ~v~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  125 (284)
T 3kk8_A           82 LVFDLVT--GGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG  125 (284)
T ss_dssp             EEECCCC--SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecCC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  33666666654432     257788889999999753

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=96.52  E-value=0.026  Score=45.26  Aligned_cols=105  Identities=15%  Similarity=0.015  Sum_probs=70.7

Q ss_pred             eeEeccCCceeEEEEEEe-----CCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC
Q 045250           36 TIKEVGDGNLNFVYIVVG-----TSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DR  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~-----~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~  107 (165)
                      -++.||.|....||++..     .+| .++||.-.+.-       .-...+...|.++|+.+.  .| ++++++.+  +.
T Consensus        45 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~E~~~l~~l~--h~-~iv~~~~~~~~~  114 (326)
T 2w1i_A           45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-------EEHLRDFEREIEILKSLQ--HD-NIVKYKGVCYSA  114 (326)
T ss_dssp             EEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC-------SHHHHHHHHHHHHHHTCC--CT-TBCCEEEEECC-
T ss_pred             eeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC-------HHHHHHHHHHHHHHHhCC--CC-CeeeEEEEEEec
Confidence            468899999999999983     245 79999865321       122356677888887774  23 34445443  32


Q ss_pred             --CCceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250          108 --TMSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 --e~~~~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                        ....+|||+++  +.+|.+.+.+..  ..    -.++.+|...|+.+|...
T Consensus       115 ~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  165 (326)
T 2w1i_A          115 GRRNLKLIMEYLP--YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR  165 (326)
T ss_dssp             ---CCEEEECCCT--TCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCceEEEEECCC--CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence              36689999997  457888776643  22    246788899999999753

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=96.52  E-value=0.015  Score=46.57  Aligned_cols=105  Identities=21%  Similarity=0.131  Sum_probs=70.5

Q ss_pred             eeEeccCCceeEEEEEEe-----CCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--E--
Q 045250           36 TIKEVGDGNLNFVYIVVG-----TSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--F--  105 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~-----~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~--  105 (165)
                      -++.||.|....||++..     .++ .++||.-...-       .-..++...|+++|+.+.   ..++++++.  +  
T Consensus        27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~   96 (327)
T 3lxl_A           27 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-------PDQQRDFQREIQILKALH---SDFIVKYRGVSYGP   96 (327)
T ss_dssp             EEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC-------HHHHHHHHHHHHHHHTCC---CTTBCCEEEEEECS
T ss_pred             hhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC-------HHHHHHHHHHHHHHHhcC---CCceeEEEEEEecC
Confidence            678899999999999983     245 79999754321       112356778888887773   234555544  3  


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHc--CCCC----HHHHHHHHHHHHHHHhcc
Q 045250          106 DRTMSLIGMRYLEPPHIILRKGLIA--GIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~e~~~~vMEdl~~~~~~lr~~l~~--g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +.....+|||+++  ..+|.+.+..  +...    -.++.+|...|+.+|...
T Consensus        97 ~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~  147 (327)
T 3lxl_A           97 GRQSLRLVMEYLP--SGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR  147 (327)
T ss_dssp             SSCEEEEEEECCT--TCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCceEEEEEeecC--CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3334669999997  3467777655  2222    256778889999999753

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=96.52  E-value=0.016  Score=45.68  Aligned_cols=111  Identities=14%  Similarity=-0.000  Sum_probs=73.0

Q ss_pred             CCcc-eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCc
Q 045250           32 FDDL-TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMS  110 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~  110 (165)
                      .+.+ -.+.||.|....||++...+ .+.||.-.....     -.-..++...|.++|+.+.  -|..++-.-+.+....
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~~~~~~-~vavK~~~~~~~-----~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~   94 (289)
T 3og7_A           23 DGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAP-----TPQQLQAFKNEVGVLRKTR--HVNILLFMGYSTAPQL   94 (289)
T ss_dssp             TTSCEEEEEEEECSSEEEEEEESSS-EEEEEEESCSSC-----CHHHHHHHHHHHHHHTTCC--CTTBCCEEEEECSSSC
T ss_pred             ccceeeeeEecCCCCeEEEEEEEcC-ceEEEEEeccCC-----CHHHHHHHHHHHHHHHhCC--CCcEEEEEeeccCCcc
Confidence            3455 56889999999999998653 677886542221     1122356677877777664  2444444444555667


Q ss_pred             eEEEecCCCCchHHHHHHHcCC-CC-----HHHHHHHHHHHHHHHhcc
Q 045250          111 LIGMRYLEPPHIILRKGLIAGI-KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdl~~~~~~lr~~l~~g~-~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      .+|||++.  ...|.+.+.... .+     -.++.+|...|+.+|...
T Consensus        95 ~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~  140 (289)
T 3og7_A           95 AIVTQWCE--GSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS  140 (289)
T ss_dssp             EEEEECCC--EEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEecC--CCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            89999998  457877775432 22     257888999999999753

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=96.51  E-value=0.011  Score=48.38  Aligned_cols=110  Identities=16%  Similarity=0.166  Sum_probs=73.6

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -.+.||.|..-.||++.+. +| .++||.-...-..  ..-....++...|.++|+.+..  | ++++++.  .+.....
T Consensus        28 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~~~E~~~l~~l~h--p-nIv~~~~~~~~~~~~~  102 (351)
T 3c0i_A           28 LCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFT--SSPGLSTEDLKREASICHMLKH--P-HIVELLETYSSDGMLY  102 (351)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH--TSSSCCHHHHHHHHHHHHHCCC--T-TBCCEEEEEEETTEEE
T ss_pred             EeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhcc--ccccchHHHHHHHHHHHHhCCC--C-CCCcEEEEEEeCCEEE
Confidence            4578999999999999875 45 8999976432211  1223566788899999988742  4 3444443  3556678


Q ss_pred             EEEecCCCCchHHHHHHHc----CCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIA----GIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~----g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  +..|.+.+.+    +..+ .    .++.+|...|.-+|...
T Consensus       103 lv~e~~~--g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~  150 (351)
T 3c0i_A          103 MVFEFMD--GADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN  150 (351)
T ss_dssp             EEEECCS--SCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeCCC--CCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  3355554443    2222 2    46788899999999753

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=96.51  E-value=0.024  Score=46.80  Aligned_cols=107  Identities=15%  Similarity=0.235  Sum_probs=65.9

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE----cCCC
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF----DRTM  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~----D~e~  109 (165)
                      -++.||.|....||++.+. +| .++||.-.....     -.....|...|..+|+.+... | ++++++.+    +...
T Consensus        13 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~-----~~~~~~~~~~E~~~l~~l~~h-~-niv~l~~~~~~~~~~~   85 (388)
T 3oz6_A           13 LVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQ-----NSTDAQRTFREIMILTELSGH-E-NIVNLLNVLRADNDRD   85 (388)
T ss_dssp             EEEC-------CEEEEEETTTCCEEEEEEECC--C-----CHHHHHHHHHHHHHHHHTTTC-T-TBCCEEEEEECTTSSC
T ss_pred             EEEEeeeCCCeEEEEEEECCCCCEEEEEEeccccc-----ChHHHHHHHHHHHHHHhccCC-C-CCCeeeeEEecCCCCE
Confidence            4578999999999999875 45 899997542221     123456778888888877643 3 34444443    2224


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      ..+|||+++  . .|.+.+..+...+    .++.+|...|.-+|...
T Consensus        86 ~~lv~e~~~--~-~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~  129 (388)
T 3oz6_A           86 VYLVFDYME--T-DLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGG  129 (388)
T ss_dssp             EEEEEECCS--E-EHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEecccC--c-CHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            689999998  2 5777776665543    46678889999999653

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=96.51  E-value=0.02  Score=45.24  Aligned_cols=106  Identities=21%  Similarity=0.106  Sum_probs=72.3

Q ss_pred             eeEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c
Q 045250           36 TIKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--D  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D  106 (165)
                      -.+.||.|....||++.+.      ++ .++||.-.....      .-...+...|.++|+.+.  .| ++++++.+  +
T Consensus        27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~--hp-~iv~~~~~~~~   97 (314)
T 2ivs_A           27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS------PSELRDLLSEFNVLKQVN--HP-HVIKLYGACSQ   97 (314)
T ss_dssp             EEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCC------HHHHHHHHHHHHHHTTCC--CT-TBCCEEEEECS
T ss_pred             eeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCC------HHHHHHHHHHHHHHhhCC--CC-ceeeEEEEEec
Confidence            4577999999999999862      33 789998753221      112356677888887663  23 44455543  5


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCC-------------------------C----HHHHHHHHHHHHHHHhcc
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLIAGIK-------------------------Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~~g~~-------------------------~----~~~a~~iG~~La~~h~~t  152 (165)
                      .....+|||+++  +.+|.+.+.+...                         .    -.++.+|...|.-+|...
T Consensus        98 ~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  170 (314)
T 2ivs_A           98 DGPLLLIVEYAK--YGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK  170 (314)
T ss_dssp             SSSCEEEEECCT--TCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCceEEEEeecC--CCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC
Confidence            667889999998  3578787765332                         1    257889999999999764

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=96.50  E-value=0.008  Score=48.39  Aligned_cols=114  Identities=13%  Similarity=-0.031  Sum_probs=76.8

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -.+.||.|....||++.+. +| .++||.-...... .........+...|..+|+.+..-.|. +++++.  .+++...
T Consensus        47 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~~~E~~~l~~l~~~~~~-i~~~~~~~~~~~~~~  124 (320)
T 3a99_A           47 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS-DWGELPNGTRVPMEVVLLKKVSSGFSG-VIRLLDWFERPDSFV  124 (320)
T ss_dssp             EEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCC-CEEECTTCCEEEHHHHHHHHHCSSSCS-BCCEEEEEECSSEEE
T ss_pred             EEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccch-hhhhhhhhhHHHHHHHHHHhhccCCCC-ceEEEEEEecCCcEE
Confidence            5688999999999999875 45 7999986543321 011112345777899999888652233 333333  3567788


Q ss_pred             EEEecCCCCchHHHHHHHcCCC-CH----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIK-YP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~-~~----~~a~~iG~~La~~h~~t  152 (165)
                      +|||++. ....|.+.+.++.. ..    .++.+|...|+-+|...
T Consensus       125 lv~e~~~-~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~  169 (320)
T 3a99_A          125 LILERPE-PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG  169 (320)
T ss_dssp             EEEECCS-SEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEcCC-CCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997 45678777765433 22    46778888999898753

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=96.50  E-value=0.022  Score=44.81  Aligned_cols=106  Identities=12%  Similarity=0.072  Sum_probs=69.7

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -++.||.|....||++.+. +| .++||.-....     .-.-...+...|.++|+.+..  | ++.+++.  .+.....
T Consensus         6 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~E~~~l~~l~h--~-~iv~~~~~~~~~~~~~   77 (292)
T 3o0g_A            6 KLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD-----DDEGVPSSALREICLLKELKH--K-NIVRLHDVLHSDKKLT   77 (292)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEESSC-----SSTTHHHHHHHHHHHHTTCCC--T-TBCCEEEEEEETTEEE
T ss_pred             eeeEecCCCCeEEEEEEECCCCceEEEEeeeccC-----CcCCcchHHHHHHHHHhcCCC--C-CEeeEEeEEEeCCEEE
Confidence            4678999999999999986 45 79999764221     112233566778888877642  3 3444443  3566778


Q ss_pred             EEEecCCCCchHHHHHHHc--CCCCH----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIA--GIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~--g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  . .+.+.+..  +...+    .++.+|...|+-+|...
T Consensus        78 lv~e~~~--~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~  121 (292)
T 3o0g_A           78 LVFEFCD--Q-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN  121 (292)
T ss_dssp             EEEECCS--E-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecCC--C-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999998  3 34444443  33322    56778888999999763

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=96.50  E-value=0.025  Score=45.76  Aligned_cols=103  Identities=10%  Similarity=0.026  Sum_probs=71.8

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -.+.+|.|....||++.+. +| .+++|.-...        ....++...|.++|+.+..  | ++++++.  .+.+...
T Consensus         9 ~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~--------~~~~~~~~~E~~~l~~l~h--p-nIv~~~~~~~~~~~~~   77 (321)
T 1tki_A            9 IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK--------GTDQVLVKKEISILNIARH--R-NILHLHESFESMEELV   77 (321)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECCC--------THHHHHHHHHHHHHHHSCC--T-TBCCEEEEEEETTEEE
T ss_pred             eeeEEecCCCeEEEEEEECCCCcEEEEEEEecC--------cccHHHHHHHHHHHHhCCC--C-CCCeEeEEEecCCEEE
Confidence            4678999999999999886 45 7888875421        1223556778888887642  3 3444443  4667788


Q ss_pred             EEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhc
Q 045250          112 IGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~  151 (165)
                      +|||+++  +..|.+.+....  ..    -.++.+|...|.-+|..
T Consensus        78 lv~e~~~--g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~  121 (321)
T 1tki_A           78 MIFEFIS--GLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH  121 (321)
T ss_dssp             EEECCCC--CCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEeCC--CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999998  357878776543  22    25778889999999975

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=96.50  E-value=0.022  Score=44.72  Aligned_cols=107  Identities=11%  Similarity=0.039  Sum_probs=73.7

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -++.||.|....||++.+. ++ .++||.-......     .-..++...|.++|+.+..  | .+++++.  .+.....
T Consensus        26 i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~-----~~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~~~~   97 (287)
T 2wei_A           26 IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-----NKDTSTILREVELLKKLDH--P-NIMKLFEILEDSSSFY   97 (287)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS-----SSCHHHHHHHHHHHHTCCC--T-TBCCEEEEEECSSEEE
T ss_pred             eeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc-----hHHHHHHHHHHHHHHhccC--C-CccEEEEEEeCCCeEE
Confidence            4678999999999999986 45 8999986533221     2356788889998887732  3 3444443  3556678


Q ss_pred             EEEecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  ...|.+.+..... .    -.++.+|...|..+|...
T Consensus        98 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~  141 (287)
T 2wei_A           98 IVGELYT--GGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN  141 (287)
T ss_dssp             EEECCCC--SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEccC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997  3456666654332 2    257788888999999763

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=96.49  E-value=0.021  Score=45.00  Aligned_cols=104  Identities=17%  Similarity=0.198  Sum_probs=67.4

Q ss_pred             eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--------
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--------  105 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--------  105 (165)
                      .++.+|.|....||++.+.. | .++||.-...-       +-..++...|.++|+.+..  | ++.+++.+        
T Consensus        15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~e~~~l~~l~h--~-~iv~~~~~~~~~~~~~   84 (320)
T 2i6l_A           15 DLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD-------PQSVKHALREIKIIRRLDH--D-NIVKVFEILGPSGSQL   84 (320)
T ss_dssp             EEEECC-----CEEEEEETTTTEEEEEEEEECCS-------HHHHHHHHHHHHHHHTCCC--T-TBCCEEEEECTTSCBC
T ss_pred             EEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC-------hHHHHHHHHHHHHHHhcCC--C-CeeEEEEecccccccc
Confidence            67889999999999999874 5 89999653211       1223566778888877632  3 33444433        


Q ss_pred             --------cCCCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250          106 --------DRTMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 --------D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                              +.....+|||+++  . .|.+.+.++....    .++.+|...|+.+|...
T Consensus        85 ~~~~~~~~~~~~~~lv~e~~~--~-~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  140 (320)
T 2i6l_A           85 TDDVGSLTELNSVYIVQEYME--T-DLANVLEQGPLLEEHARLFMYQLLRGLKYIHSAN  140 (320)
T ss_dssp             CC----CCSCSEEEEEEECCS--E-EHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccccccccccCceeEEeeccC--C-CHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhCC
Confidence                    3356679999997  3 6888887766543    46788888999999753

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=96.48  E-value=0.027  Score=44.04  Aligned_cols=106  Identities=19%  Similarity=0.099  Sum_probs=71.3

Q ss_pred             eeEeccCCceeEEEEEEeCC----C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCCC
Q 045250           36 TIKEVGDGNLNFVYIVVGTS----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH-FDRTM  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~e~  109 (165)
                      -.+.||.|....||++....    + .+.||.......      .-..++...|...|+.+.  .|. +++++. ++...
T Consensus        19 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~e~~~l~~l~--h~~-iv~~~~~~~~~~   89 (281)
T 1mp8_A           19 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS------DSVREKFLQEALTMRQFD--HPH-IVKLIGVITENP   89 (281)
T ss_dssp             EEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTS------HHHHHHHHHHHHHHHTCC--CTT-BCCEEEEECSSS
T ss_pred             EEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCC------HHHHHHHHHHHHHHHhCC--CCc-cceEEEEEccCc
Confidence            46779999999999998742    2 588887653211      122356677888887663  244 444444 45566


Q ss_pred             ceEEEecCCCCchHHHHHHHcCC--CCH----HHHHHHHHHHHHHHhcc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGI--KYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~--~~~----~~a~~iG~~La~~h~~t  152 (165)
                      ..+|||+++  ...|.+.+....  ...    .++.+|...|..+|...
T Consensus        90 ~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  136 (281)
T 1mp8_A           90 VWIIMELCT--LGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR  136 (281)
T ss_dssp             CEEEEECCT--TEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cEEEEecCC--CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            789999998  457888776543  222    46788899999999753

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=96.48  E-value=0.028  Score=44.20  Aligned_cols=106  Identities=16%  Similarity=0.129  Sum_probs=72.7

Q ss_pred             eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~  112 (165)
                      -++.||.|..-.||++.+.+| .++||.-......     .-..++...|.++|+.+..  | ++++++.  .+.+...+
T Consensus         6 ~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~E~~~l~~l~h--~-~iv~~~~~~~~~~~~~l   77 (288)
T 1ob3_A            6 GLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKED-----EGIPSTTIREISILKELKH--S-NIVKLYDVIHTKKRLVL   77 (288)
T ss_dssp             EEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGG-----GCCCHHHHHHHHGGGGCCC--T-TBCCEEEEEECSSCEEE
T ss_pred             hhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccc-----cccchhHHHHHHHHHhcCC--C-CEeeeeeEEccCCeEEE
Confidence            467899999999999998766 8999976533221     1123567778888876642  3 4444444  34567789


Q ss_pred             EEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||+++  . .|.+.+...  ...    ..++.+|...|+-+|...
T Consensus        78 v~e~~~--~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  120 (288)
T 1ob3_A           78 VFEHLD--Q-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR  120 (288)
T ss_dssp             EEECCS--E-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecC--C-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999998  3 677777652  222    257788899999999753

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=96.47  E-value=0.0081  Score=48.39  Aligned_cols=109  Identities=17%  Similarity=0.027  Sum_probs=70.8

Q ss_pred             Ccc-eeEeccCCceeEEEEEEeC-CC-e----EEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE
Q 045250           33 DDL-TIKEVGDGNLNFVYIVVGT-SG-S----FVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF  105 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rV~~~-~g-s----vIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~  105 (165)
                      ..+ -++.||.|....||++... +| .    +++|.-...      ...-...+...|..+|+.+.  -| ++++++.+
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~------~~~~~~~~~~~e~~~l~~l~--h~-~iv~~~~~   83 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDK------SGRQSFQAVTDHMLAIGSLD--HA-HIVRLLGL   83 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCT------TSCSCBCSCCHHHHHHHTCC--CT-TBCCEEEE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccc------ccHHHHHHHHHHHHHHhcCC--CC-CcCeEEEE
Confidence            344 6788999999999999865 33 4    556654221      12233346667888876653  13 34455544


Q ss_pred             -cCCCceEEEecCCCCchHHHHHHHcC--CC----CHHHHHHHHHHHHHHHhcc
Q 045250          106 -DRTMSLIGMRYLEPPHIILRKGLIAG--IK----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 -D~e~~~~vMEdl~~~~~~lr~~l~~g--~~----~~~~a~~iG~~La~~h~~t  152 (165)
                       ......+|||+++  ...|.+.+...  ..    .-.++.+|...|.-+|...
T Consensus        84 ~~~~~~~~v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  135 (325)
T 3kex_A           84 CPGSSLQLVTQYLP--LGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG  135 (325)
T ss_dssp             ECBSSEEEEEECCT--TCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTT
T ss_pred             EcCCccEEEEEeCC--CCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             4556679999998  34677777653  22    1367889999999999764

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=96.46  E-value=0.0074  Score=49.39  Aligned_cols=108  Identities=17%  Similarity=0.139  Sum_probs=70.2

Q ss_pred             Ccc-eeEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE
Q 045250           33 DDL-TIKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH  104 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~  104 (165)
                      +++ -.++||.|..--||++...      +| .|.||.-..--       .-..++...|+++|+.+.-  | ++-++|.
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-------~~~~~~f~~E~~il~~l~H--p-nIV~l~g   82 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-------DNARKDFHREAELLTNLQH--E-HIVKFYG   82 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC-------HHHHHHHHHHHHHHTTCCC--T-TBCCEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC-------hHHHHHHHHHHHHHHhCCC--C-CCccEEE
Confidence            344 3467999999999999753      34 68889743211       1123456778888876632  3 4455555


Q ss_pred             E--cCCCceEEEecCCCCchHHHHHHHcCC--------------CC----HHHHHHHHHHHHHHHhcc
Q 045250          105 F--DRTMSLIGMRYLEPPHIILRKGLIAGI--------------KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       105 ~--D~e~~~~vMEdl~~~~~~lr~~l~~g~--------------~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +  +.+...+||||++  +.+|++.|.+..              ..    -.++.+|+..|+-+|...
T Consensus        83 ~~~~~~~~~lV~Ey~~--~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~  148 (299)
T 4asz_A           83 VCVEGDPLIMVFEYMK--HGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH  148 (299)
T ss_dssp             EECSSSSEEEEEECCT--TCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEeeCCEEEEEEEcCC--CCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            4  5567789999998  458888886421              21    258899999999999753

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=96.45  E-value=0.025  Score=44.25  Aligned_cols=102  Identities=15%  Similarity=0.096  Sum_probs=70.6

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~  111 (165)
                      -.+.+|.|....||++.+. +| .++||.-...         -..++...|.+.++.+...  ..+|.++.+  +.....
T Consensus        14 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---------~~~~~~~~e~~~~~~l~~~--~~i~~~~~~~~~~~~~~   82 (298)
T 1csn_A           14 VGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR---------SDAPQLRDEYRTYKLLAGC--TGIPNVYYFGQEGLHNV   82 (298)
T ss_dssp             EEEEEEECSSCEEEEEEETTTTEEEEEEEEECC---------TTSCCHHHHHHHHHHTTTC--TTCCCEEEEEEETTEEE
T ss_pred             EEEEEeecCCEEEEEEEECCCCcEEEEEEeccC---------CccHHHHHHHHHHHHHhcC--CCCCeEEeecCCCceeE
Confidence            5678999999999999974 45 8999964211         1224567788888887553  245666655  445668


Q ss_pred             EEEecCCCCchHHHHHHHcC-C-CC----HHHHHHHHHHHHHHHhc
Q 045250          112 IGMRYLEPPHIILRKGLIAG-I-KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g-~-~~----~~~a~~iG~~La~~h~~  151 (165)
                      +|||+++   .+|.+.+... . ..    -.++.+|...|+.+|..
T Consensus        83 lv~e~~~---~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  125 (298)
T 1csn_A           83 LVIDLLG---PSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK  125 (298)
T ss_dssp             EEEECCC---CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEecC---CCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999996   2666666642 2 22    25788889999999965

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=96.45  E-value=0.028  Score=45.18  Aligned_cols=102  Identities=19%  Similarity=0.126  Sum_probs=69.5

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~  111 (165)
                      -.+.||.|....||++.+. +| .++||.-...         -..++...|.++|+.+...  ..+++++.+  +.....
T Consensus        13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---------~~~~~~~~E~~~l~~l~~h--~~i~~~~~~~~~~~~~~   81 (330)
T 2izr_A           13 VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMK---------SRAPQLHLEYRFYKQLGSG--DGIPQVYYFGPCGKYNA   81 (330)
T ss_dssp             EEEECCC-CTTSEEEEEETTTTEEEEEEEEETT---------CSSCCHHHHHHHHHHHCSC--TTSCCEEEEEEETTEEE
T ss_pred             EEEEeeccCCceEEEEEECCCCcEEEEEEeccc---------cchHHHHHHHHHHHHhhCC--CCCCEEEEEEecCCccE
Confidence            5678999999999999974 55 8999963211         1124677899999888543  345555544  445568


Q ss_pred             EEEecCCCCchHHHHHHHc--CCCC----HHHHHHHHHHHHHHHhc
Q 045250          112 IGMRYLEPPHIILRKGLIA--GIKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~--g~~~----~~~a~~iG~~La~~h~~  151 (165)
                      +|||+++.   +|.+.+..  +...    -.++.+|...|.-+|..
T Consensus        82 lv~e~~~~---~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~  124 (330)
T 2izr_A           82 MVLELLGP---SLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK  124 (330)
T ss_dssp             EEEECCCC---BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEeCCC---CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999962   56666553  3332    25788889999999975

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=96.44  E-value=0.025  Score=48.19  Aligned_cols=108  Identities=15%  Similarity=0.150  Sum_probs=75.7

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~  111 (165)
                      -.+.||.|....||++.+. +| .++||.-.....    .-....++...|.++|+.+..  | ++++++.+  +.....
T Consensus        30 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~~~~~~~~E~~~l~~l~h--p-niv~~~~~~~~~~~~~  102 (484)
T 3nyv_A           30 GQRVLGKGSFGEVILCKDKITGQECAVKVISKRQV----KQKTDKESLLREVQLLKQLDH--P-NIMKLYEFFEDKGYFY  102 (484)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CBSSCHHHHHHHHHHHTTCCC--T-TBCCEEEEEECSSEEE
T ss_pred             EeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhc----ccchHHHHHHHHHHHHHhCCC--C-CCCcEEEEEEeCCEEE
Confidence            4678999999999999986 45 899997532211    113456788889999877732  3 44555543  556678


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||++.  ...|.+.+.....+     -.++.+|...|+-+|...
T Consensus       103 lv~e~~~--~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  146 (484)
T 3nyv_A          103 LVGEVYT--GGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK  146 (484)
T ss_dssp             EEECCCC--SCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecCC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  34677777665543     247888899999999763

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=96.44  E-value=0.011  Score=46.85  Aligned_cols=114  Identities=11%  Similarity=-0.057  Sum_probs=71.3

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccC-CCCCceEEEE--cCCCc
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLC-PDHVPEVYHF--DRTMS  110 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~-p~~vP~v~~~--D~e~~  110 (165)
                      -.+.||.|....||++.+. +| .++||.-...-.. .........+...|...|+.+.... -.++++++.+  +.+..
T Consensus        35 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~  113 (312)
T 2iwi_A           35 LGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVL-GWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGF  113 (312)
T ss_dssp             EEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC---------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----C
T ss_pred             EeeEEEcCCCEEEEEEEEccCCeEEEEEEEeccccc-ccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeE
Confidence            4678999999999999875 45 7999986533211 0111123445667888888886421 2345555544  56788


Q ss_pred             eEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 045250          111 LIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       111 ~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      .+|||+.- ....|.+.+.++...     -.++.+|...|..+|..
T Consensus       114 ~~v~e~~~-~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~  158 (312)
T 2iwi_A          114 MLVLERPL-PAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSR  158 (312)
T ss_dssp             EEEEECCS-SEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEecC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            99999943 256788877664432     25788889999999976

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=96.43  E-value=0.016  Score=46.06  Aligned_cols=105  Identities=16%  Similarity=0.204  Sum_probs=68.7

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc------C
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD------R  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D------~  107 (165)
                      -++.||.|....||++.+. +| .++||.-...-       .-..++...|+++|+.+..  | ++++++.+.      .
T Consensus        33 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~E~~~l~~l~h--~-~iv~~~~~~~~~~~~~  102 (317)
T 2buj_A           33 FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE-------QQDREEAQREADMHRLFNH--P-NILRLVAYCLRERGAK  102 (317)
T ss_dssp             EEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS-------HHHHHHHHHHHHHHHTCCC--T-TBCCCCEEEEEEETTE
T ss_pred             EEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC-------HHHHHHHHHHHHHHhhcCC--C-CeeeEEEEEEeccCCC
Confidence            5788999999999999984 45 89999753211       1234567788888877632  3 445555442      3


Q ss_pred             CCceEEEecCCCCchHHHHHHHc----CCC-CH----HHHHHHHHHHHHHHhcc
Q 045250          108 TMSLIGMRYLEPPHIILRKGLIA----GIK-YP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 e~~~~vMEdl~~~~~~lr~~l~~----g~~-~~----~~a~~iG~~La~~h~~t  152 (165)
                      ....+|||++.  ...|.+.+..    +.. ..    .++.+|...|+.+|...
T Consensus       103 ~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~  154 (317)
T 2buj_A          103 HEAWLLLPFFK--RGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG  154 (317)
T ss_dssp             EEEEEEEECCT--TCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ceeEEEEEeCC--CCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            45679999998  3466666654    232 22    47888899999999763

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=96.43  E-value=0.028  Score=44.46  Aligned_cols=105  Identities=13%  Similarity=0.081  Sum_probs=69.8

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -.+.+|.|....||++.+. +| .++||.......       ...++...|.++|+.+..  |. +++++.  .+.....
T Consensus        13 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~~~~~~   82 (304)
T 2jam_A           13 FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA-------FRDSSLENEIAVLKKIKH--EN-IVTLEDIYESTTHYY   82 (304)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-------------HHHHHHHHHHHCCC--TT-BCCEEEEEECSSEEE
T ss_pred             eeeeccCCCCceEEEEEECCCCCEEEEEEEecccc-------cchHHHHHHHHHHHhCCC--CC-eeehhhhcccCCEEE
Confidence            4678999999999999986 45 799997653211       123567788888887742  33 344443  3556678


Q ss_pred             EEEecCCCCchHHHHHHHcCCC-CH----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIK-YP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~-~~----~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  +..|.+.+.+... ..    .++.+|...|..+|...
T Consensus        83 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  126 (304)
T 2jam_A           83 LVMQLVS--GGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENG  126 (304)
T ss_dssp             EEECCCC--SCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEcCC--CccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997  3466666655433 22    47788888899898753

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=96.43  E-value=0.058  Score=42.29  Aligned_cols=108  Identities=14%  Similarity=0.072  Sum_probs=72.9

Q ss_pred             Ccc-eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcC
Q 045250           33 DDL-TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDR  107 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~  107 (165)
                      +.+ -++.+|.|....||++.+.. | .+++|.-....       .-..++...|.+.|+.+.  .|. +++++  +.+.
T Consensus        19 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~~~~~~~~e~~~l~~l~--h~~-i~~~~~~~~~~   88 (302)
T 2j7t_A           19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS-------EEELEDYIVEIEILATCD--HPY-IVKLLGAYYHD   88 (302)
T ss_dssp             GTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-----------CCHHHHHHHHHHHHHCC--CTT-BCCEEEEEECC
T ss_pred             cceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC-------HHHHHHHHHHHHHHhcCC--CCC-EeeeeeeeeeC
Confidence            344 56789999999999999873 5 78888754321       234577888999888764  243 34444  3466


Q ss_pred             CCceEEEecCCCCchHHHHHHHc--CCCC----HHHHHHHHHHHHHHHhcc
Q 045250          108 TMSLIGMRYLEPPHIILRKGLIA--GIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 e~~~~vMEdl~~~~~~lr~~l~~--g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ....+|||+++  +..|.+.+..  +...    -.++.+|...|..+|...
T Consensus        89 ~~~~lv~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  137 (302)
T 2j7t_A           89 GKLWIMIEFCP--GGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR  137 (302)
T ss_dssp             -CEEEEEECCT--TEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CeEEEEEEeCC--CCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            77889999998  3467666654  2222    257788889999999764

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=96.43  E-value=0.032  Score=44.02  Aligned_cols=110  Identities=13%  Similarity=-0.006  Sum_probs=73.1

Q ss_pred             Ccc-eeEeccCCceeEEEEEEe------CCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE
Q 045250           33 DDL-TIKEVGDGNLNFVYIVVG------TSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH  104 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rV~~------~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~  104 (165)
                      +.+ -.+.+|.|....||++..      .++ .++||.-.....      .-...+...|.++|+.+... |. +++++.
T Consensus        27 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-p~-iv~~~~   98 (316)
T 2xir_A           27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT------HSEHRALMSELKILIHIGHH-LN-VVNLLG   98 (316)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC------HHHHHHHHHHHHHHHHHCCC-TT-BCCEEE
T ss_pred             hheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCC------cHHHHHHHHHHHHHHhcccC-CC-eeeEEE
Confidence            344 467899999999999974      234 799997653211      11234667788888877542 33 444554


Q ss_pred             E--cCC-CceEEEecCCCCchHHHHHHHcCCC----------------C-----HHHHHHHHHHHHHHHhcc
Q 045250          105 F--DRT-MSLIGMRYLEPPHIILRKGLIAGIK----------------Y-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       105 ~--D~e-~~~~vMEdl~~~~~~lr~~l~~g~~----------------~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +  +++ ...+|||+++  +.+|.+.+.....                .     -.++.+|...|..+|...
T Consensus        99 ~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  168 (316)
T 2xir_A           99 ACTKPGGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK  168 (316)
T ss_dssp             EECCTTSCCEEEEECCT--TEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEecCCCceEEEEEcCC--CCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3  222 3789999998  4588888876432                1     257788999999999763

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=96.43  E-value=0.02  Score=46.51  Aligned_cols=108  Identities=16%  Similarity=0.140  Sum_probs=73.8

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -++.||.|...-||++... +| .++||.........    .-..++...|..+|+.+..  |. +++++.  .|.....
T Consensus        10 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~E~~~l~~l~h--p~-Iv~~~~~~~~~~~~~   82 (318)
T 1fot_A           10 ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVR----LKQVEHTNDERLMLSIVTH--PF-IIRMWGTFQDAQQIF   82 (318)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH----TTCHHHHHHHHHHHHSCCB--TT-BCCEEEEEECSSEEE
T ss_pred             EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh----hhHHHHHHHHHHHHhhCCC--CC-CceEeEEEEeCCEEE
Confidence            4678999999999999886 45 79999865433211    1235677788888876532  43 444443  3556778


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  +..|.+.+.....+ .    .++.+|...|.-+|...
T Consensus        83 lv~e~~~--gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  126 (318)
T 1fot_A           83 MIMDYIE--GGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD  126 (318)
T ss_dssp             EEECCCC--SCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             EEEeCCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  34777777665433 2    36778888899899653

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=96.43  E-value=0.0073  Score=53.60  Aligned_cols=68  Identities=16%  Similarity=0.028  Sum_probs=52.6

Q ss_pred             HHHHHHHHHHhhccCCCCCceEEEE--cCCCceEEEecCCCCchHHHHHHHcCCCC--HHHHHHHHHHHHHHHhcc
Q 045250           81 AYFEALALKEHGKLCPDHVPEVYHF--DRTMSLIGMRYLEPPHIILRKGLIAGIKY--PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus        81 ~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~vMEdl~~~~~~lr~~l~~g~~~--~~~a~~iG~~La~~h~~t  152 (165)
                      ...|+++|+.+..  ...+|+++.|  |....-+||||++  +..|.+.|.++...  ..+..+|...|+-+|...
T Consensus       288 ~~~E~~~l~~~~~--~~~i~~~~~~~ed~~~~yLVMEyv~--G~~L~d~i~~~~~l~~~~I~~QIl~AL~ylH~~G  359 (569)
T 4azs_A          288 LHNEIKFLTQPPA--GFDAPAVLAHGENAQSGWLVMEKLP--GRLLSDMLAAGEEIDREKILGSLLRSLAALEKQG  359 (569)
T ss_dssp             HHHHHHHHHSCCT--TCCCCCEEEEEECSSEEEEEEECCC--SEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhcCC--CCCeeEEEEEEEECCEEEEEEecCC--CCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHCC
Confidence            4456777766543  4578998776  4556789999998  57999999887654  379999999999999865

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=96.42  E-value=0.017  Score=47.50  Aligned_cols=109  Identities=9%  Similarity=-0.006  Sum_probs=72.8

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -++.||.|....||++... +| .+.||.-.......    .-...+...|..+|+..... |. +++++.  .+.....
T Consensus        13 ~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~E~~~l~~~~~h-p~-iv~l~~~~~~~~~~~   86 (345)
T 3a8x_A           13 LLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVND----DEDIDWVQTEKHVFEQASNH-PF-LVGLHSCFQTESRLF   86 (345)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCS----HHHHHHHHHHHHHHHHTTTC-TT-BCCEEEEEECSSEEE
T ss_pred             EEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcc----hHHHHHHHHHHHHHHhcCCC-Cc-cCeEEEEEEeCCEEE
Confidence            5678999999999999986 45 78889765332110    12235667788888776443 43 333433  3667778


Q ss_pred             EEEecCCCCchHHHHHHHcCC-CCH----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGI-KYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~-~~~----~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  +..|.+.+.+.. ...    .++.+|...|.-+|...
T Consensus        87 lv~e~~~--gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~  130 (345)
T 3a8x_A           87 FVIEYVN--GGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG  130 (345)
T ss_dssp             EEECCCC--SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  346777666533 322    46778888899999753

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=96.42  E-value=0.021  Score=47.24  Aligned_cols=107  Identities=15%  Similarity=0.006  Sum_probs=73.0

Q ss_pred             eeEeccCCceeEEEEEEeC--------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-
Q 045250           36 TIKEVGDGNLNFVYIVVGT--------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-  105 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~--------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-  105 (165)
                      -.+.||.|..-.||++.+.        ++ .++||.-.....      .-...+...|.++|+.+... | ++++++.+ 
T Consensus        73 i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-p-nIv~~~~~~  144 (382)
T 3tt0_A           73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT------EKDLSDLISEMEMMKMIGKH-K-NIINLLGAC  144 (382)
T ss_dssp             EEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCC------HHHHHHHHHHHHHHHHHCCC-T-TBCCEEEEE
T ss_pred             eeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccC------HHHHHHHHHHHHHHHHhcCC-c-hhhhheeee
Confidence            3477999999999999852        22 588887653321      12236777899999888543 3 34444443 


Q ss_pred             -cCCCceEEEecCCCCchHHHHHHHcCC-----------------CC----HHHHHHHHHHHHHHHhcc
Q 045250          106 -DRTMSLIGMRYLEPPHIILRKGLIAGI-----------------KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 -D~e~~~~vMEdl~~~~~~lr~~l~~g~-----------------~~----~~~a~~iG~~La~~h~~t  152 (165)
                       +.....+|||+++  ..+|.+.+....                 ..    -.++.+|...|+-+|...
T Consensus       145 ~~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  211 (382)
T 3tt0_A          145 TQDGPLYVIVEYAS--KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK  211 (382)
T ss_dssp             CSSSSCEEEEECCT--TCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccCCceEEEEEecC--CCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence             4556789999998  357888876643                 22    257888899999999753

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=96.42  E-value=0.02  Score=49.17  Aligned_cols=106  Identities=16%  Similarity=0.183  Sum_probs=68.8

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~  111 (165)
                      -++.||.|..-.||++.+. ++ .+.||.-......     .-...+...|.++|+.+..  | ++++++.+  +.....
T Consensus        41 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~E~~~l~~l~h--p-niv~~~~~~~~~~~~~  112 (494)
T 3lij_A           41 RVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVS-----TSSNSKLLEEVAVLKLLDH--P-NIMKLYDFFEDKRNYY  112 (494)
T ss_dssp             EEEEEECC---EEEEEEETTTCCEEEEEEEEC----------CTTHHHHHHHHHHTTCCC--T-TBCCEEEEEECSSEEE
T ss_pred             EeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccC-----chHHHHHHHHHHHHHhCCC--C-CCCeEEEEEEeCCEEE
Confidence            4788999999999999986 45 7888876533221     1235677889988877642  4 34444443  556678


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      +|||+++ + ..|.+.+.....+     ..++.+|...|+-+|..
T Consensus       113 lv~e~~~-~-g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  155 (494)
T 3lij_A          113 LVMECYK-G-GELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKH  155 (494)
T ss_dssp             EEEECCC-S-CBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEecCC-C-CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999998 3 3566666554332     25778888999999965

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=96.42  E-value=0.025  Score=44.82  Aligned_cols=108  Identities=14%  Similarity=0.078  Sum_probs=68.8

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -.+.||.|....||++.+. +| .++||.-...-..    -.-...+...|...|+.+..  | ++++++.  .+.....
T Consensus        36 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~E~~~l~~l~h--~-~i~~~~~~~~~~~~~~  108 (310)
T 2wqm_A           36 IEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLM----DAKARADCIKEIDLLKQLNH--P-NVIKYYASFIEDNELN  108 (310)
T ss_dssp             EEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSC----CHHHHHHHHHHHHHHHTCCC--T-TBCCEEEEEEETTEEE
T ss_pred             EEEeecCCCCceEEEEEEcCCCceEEEEeeehhhcc----CHHHHHHHHHHHHHHHhCCC--C-CEeeEEEEEEcCCcEE
Confidence            4578999999999999875 45 8999976542111    01223566678888876642  3 3444443  3566778


Q ss_pred             EEEecCCCCchHHHHHHHc----CCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIA----GIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~----g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  ...|.+.+..    +...     -.++.+|...|..+|...
T Consensus       109 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~  156 (310)
T 2wqm_A          109 IVLELAD--AGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR  156 (310)
T ss_dssp             EEEECCC--SCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecCC--CCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            9999998  3456655542    2222     257788899999999753

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=96.42  E-value=0.024  Score=44.94  Aligned_cols=105  Identities=12%  Similarity=0.013  Sum_probs=72.6

Q ss_pred             eeEeccCCceeEEEEEEeC--CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCC---CCceEEE--EcC
Q 045250           36 TIKEVGDGNLNFVYIVVGT--SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPD---HVPEVYH--FDR  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~--~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~---~vP~v~~--~D~  107 (165)
                      -++.||.|....||++.+.  +| .++||.-...-        -..++...|.++|+.+....+.   .+++++.  .+.
T Consensus        18 ~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~   89 (339)
T 1z57_A           18 IVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD--------RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH   89 (339)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH--------HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred             EEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC--------chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccC
Confidence            5678999999999999873  45 79999754221        1236778899999888764322   3455554  355


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhc
Q 045250          108 TMSLIGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       108 e~~~~vMEdl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~  151 (165)
                      ....+|||+++.   .|.+.+....   ..    -.++.+|...|+-+|..
T Consensus        90 ~~~~lv~e~~~~---~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~  137 (339)
T 1z57_A           90 GHICIVFELLGL---STYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN  137 (339)
T ss_dssp             TEEEEEEECCCC---BHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEEcCCCC---CHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC
Confidence            677899999962   5566665543   11    25788889999999975

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=96.39  E-value=0.016  Score=45.61  Aligned_cols=105  Identities=17%  Similarity=0.048  Sum_probs=71.1

Q ss_pred             eeEeccCCceeEEEEEEe----C-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c-
Q 045250           36 TIKEVGDGNLNFVYIVVG----T-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--D-  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~----~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D-  106 (165)
                      -++.||.|....||++..    . +| .++||.-....       .-...+...|.++|+.+.   -.++++++.+  + 
T Consensus        14 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~   83 (295)
T 3ugc_A           14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-------EEHLRDFEREIEILKSLQ---HDNIVKYKGVCYSA   83 (295)
T ss_dssp             EEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC-------HHHHHHHHHHHHHHHTCC---CTTBCCEEEEECHH
T ss_pred             hhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC-------HHHHHHHHHHHHHHHhCC---CCCEeeEEEEEecC
Confidence            568899999999999973    2 45 79999754221       112346677888887774   2344555543  2 


Q ss_pred             -CCCceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250          107 -RTMSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 -~e~~~~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                       .....+|||+++  +.+|.+.+....  ..    -.++.+|...|+-+|...
T Consensus        84 ~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  134 (295)
T 3ugc_A           84 GRRNLKLIMEYLP--YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR  134 (295)
T ss_dssp             HHTSCEEEEECCT--TCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCceEEEEEeCC--CCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCC
Confidence             345789999997  457878776543  22    257888999999999754

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=96.38  E-value=0.016  Score=47.45  Aligned_cols=102  Identities=15%  Similarity=0.076  Sum_probs=66.8

Q ss_pred             eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -.+.||.|..-.||++.+.. + .++||.-...         ...++...|.++|+.+..  | ++++++.  .+.....
T Consensus        57 ~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~---------~~~~~~~~E~~~l~~l~h--~-niv~~~~~~~~~~~~~  124 (349)
T 2w4o_A           57 VESELGRGATSIVYRCKQKGTQKPYALKVLKKT---------VDKKIVRTEIGVLLRLSH--P-NIIKLKEIFETPTEIS  124 (349)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-------------------CHHHHHCCC--T-TBCCEEEEEECSSEEE
T ss_pred             EeeEEeeCCCEEEEEEEECCCCcEEEEEEeccc---------hhHHHHHHHHHHHHhCCC--C-CCcceeeeEecCCeEE
Confidence            35789999999999999863 4 7999975422         123566678888887752  3 3444443  3556678


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      +|||+++  +..|.+.+.+...+     -.++.+|...|.-+|..
T Consensus       125 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~  167 (349)
T 2w4o_A          125 LVLELVT--GGELFDRIVEKGYYSERDAADAVKQILEAVAYLHEN  167 (349)
T ss_dssp             EEECCCC--SCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEeCC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999997  35777777665432     25778888899999975

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=96.37  E-value=0.014  Score=46.86  Aligned_cols=110  Identities=18%  Similarity=0.115  Sum_probs=72.7

Q ss_pred             Ccc-eeEeccCCceeEEEEEEeC-CC---eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--E
Q 045250           33 DDL-TIKEVGDGNLNFVYIVVGT-SG---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--F  105 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rV~~~-~g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~  105 (165)
                      +++ -.+.||.|....||++... +|   .++||.-.....      .-...+...|.++|+.+... | ++++++.  .
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-p-~iv~~~~~~~   96 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS------KDDHRDFAGELEVLCKLGHH-P-NIINLLGACE   96 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------------CHHHHHHHHHTTCCCC-T-TBCCEEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccc------hHHHHHHHHHHHHHHhccCC-C-chhhhceeee
Confidence            445 4678999999999999875 44   348887654322      12335677888888777432 3 3444443  4


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcCC-----------------CC----HHHHHHHHHHHHHHHhcc
Q 045250          106 DRTMSLIGMRYLEPPHIILRKGLIAGI-----------------KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~e~~~~vMEdl~~~~~~lr~~l~~g~-----------------~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +.....+|||+++  +.+|.+.+.+..                 ..    -.++.+|...|+.+|...
T Consensus        97 ~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  162 (327)
T 1fvr_A           97 HRGYLYLAIEYAP--HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ  162 (327)
T ss_dssp             ETTEEEEEECCCT--TCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eCCceEEEEecCC--CCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            5667789999997  347888776543                 11    257888899999999753

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=96.37  E-value=0.0097  Score=50.19  Aligned_cols=112  Identities=15%  Similarity=0.021  Sum_probs=72.5

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCcccccc-CCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCI-GESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~-~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~  112 (165)
                      -.+.||.|..-.||++.+. ++ .+.||.-....... .....-...+...|.++|+.+..  |..+.-.-+++.+...+
T Consensus       139 ~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--pniv~l~~~~~~~~~~l  216 (419)
T 3i6u_A          139 MSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH--PCIIKIKNFFDAEDYYI  216 (419)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCC--TTBCCCCEEEESSEEEE
T ss_pred             EEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCC--CCEeeEEEEEecCceEE
Confidence            4567999999999999876 44 79999765432110 01112223356789999988742  55444444567778899


Q ss_pred             EEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~  151 (165)
                      |||+++  ...|.+.+.....+ .    .++.+|...|+-+|..
T Consensus       217 v~e~~~--~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~  258 (419)
T 3i6u_A          217 VLELME--GGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN  258 (419)
T ss_dssp             EEECCT--TCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEcCC--CCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999998  34666666554433 2    4677888899999965

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=96.36  E-value=0.024  Score=47.91  Aligned_cols=109  Identities=9%  Similarity=0.003  Sum_probs=72.5

Q ss_pred             eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -++.||.|..--||++.... + .+.||.-.......    .-..++...|..+|+..... |.. ++++.  .+.+...
T Consensus        56 ~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~----~~~~~~~~~E~~il~~~~~h-p~I-v~l~~~~~~~~~~~  129 (396)
T 4dc2_A           56 LLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVND----DEDIDWVQTEKHVFEQASNH-PFL-VGLHSCFQTESRLF  129 (396)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC--------CCHHHHHHHHHHHHTTC-TTB-CCEEEEEECSSEEE
T ss_pred             EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccC----HHHHHHHHHHHHHHHhcCCC-CCc-CeeEEEEEECCEEE
Confidence            46789999999999999863 4 68888765433211    12345678899998876543 433 33433  3666778


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  +..|...+.....+ .    .++.+|...|.-+|...
T Consensus       130 lV~E~~~--gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~g  173 (396)
T 4dc2_A          130 FVIEYVN--GGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG  173 (396)
T ss_dssp             EEEECCT--TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEcCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  34666666654333 2    46778888888899753

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=96.35  E-value=0.032  Score=45.30  Aligned_cols=109  Identities=14%  Similarity=0.047  Sum_probs=71.2

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      .++.||.|....||++.+. +| .++||.-......  ..-.--..+...|.++|+.+..  | ++++++.  .+.....
T Consensus        14 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~~~E~~~l~~l~h--~-~iv~~~~~~~~~~~~~   88 (346)
T 1ua2_A           14 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRS--EAKDGINRTALREIKLLQELSH--P-NIIGLLDAFGHKSNIS   88 (346)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC--------------CTHHHHHHHHHHHCCC--T-TBCCEEEEECCTTCCE
T ss_pred             EEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcc--hhhhhhhHHHHHHHHHHhhCCC--C-CCCeEEEEEeeCCceE
Confidence            5678999999999999986 45 7999987643321  1001112466788988887742  3 4445543  3667889


Q ss_pred             EEEecCCCCchHHHHHHHcCC--C----CHHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGI--K----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~--~----~~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  . .+.+.+....  .    .-.++.+|...|.-+|...
T Consensus        89 lv~e~~~--~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  132 (346)
T 1ua2_A           89 LVFDFME--T-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW  132 (346)
T ss_dssp             EEEECCS--E-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEcCC--C-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  3 5666665543  1    1368888999999999753

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=96.35  E-value=0.032  Score=46.02  Aligned_cols=106  Identities=19%  Similarity=0.118  Sum_probs=65.7

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cC-----
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-DR-----  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~-----  107 (165)
                      .++.+|.|....||++.+. +| .|+||.-..-..     -.....|...|.++|+.+..  |.. .+++.+ ..     
T Consensus        29 ~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--pnI-v~l~~~~~~~~~~~  100 (367)
T 1cm8_A           29 DLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ-----SELFAKRAYRELRLLKHMRH--ENV-IGLLDVFTPDETLD  100 (367)
T ss_dssp             EEEEC------CEEEEEETTTCCEEEEEECSSTTS-----SHHHHHHHHHHHHHHHHCCB--TTB-CCCSEEECSCSSTT
T ss_pred             EeEEeeecCCeEEEEEEECCCCCEEEEEEeCcccc-----CHHHHHHHHHHHHHHHhCCC--cCC-CCceeeEecCCccc
Confidence            5678999999999999875 45 899997642211     11234677889999988752  433 333322 22     


Q ss_pred             --CCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250          108 --TMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 --e~~~~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                        ....+|||+++   ..|.+.+..+....    .++.+|...|.-+|...
T Consensus       101 ~~~~~~lv~e~~~---~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~  148 (367)
T 1cm8_A          101 DFTDFYLVMPFMG---TDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG  148 (367)
T ss_dssp             TCCCCEEEEECCS---EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCceEEEEEecCC---CCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence              23489999996   36777666655432    46778888999999763

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=96.34  E-value=0.008  Score=46.80  Aligned_cols=107  Identities=18%  Similarity=0.113  Sum_probs=71.7

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--Ec--CCC
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FD--RTM  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D--~e~  109 (165)
                      -++.+|.|....||++.+. +| .+++|.-.....     -....++...|.+.|+.+.  .| ++++++.  ++  ...
T Consensus        10 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~e~~~l~~l~--h~-~i~~~~~~~~~~~~~~   81 (279)
T 2w5a_A           10 VLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-----TEAEKQMLVSEVNLLRELK--HP-NIVRYYDRIIDRTNTT   81 (279)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTC-----CHHHHHHHHHHHHHHHHCC--CT-TBCCEEEEEEEGGGTE
T ss_pred             eehhccCCCCcEEEEEEECCCCcEEEEEEEEcccC-----CHHHHHHHHHHHHHHHhcC--CC-CCCeEEEEEecCCCce
Confidence            4678999999999999886 45 788887643211     0122356677888888774  24 4455554  33  445


Q ss_pred             ceEEEecCCCCchHHHHHHHcCC-----CC----HHHHHHHHHHHHHHHhcc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGI-----KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~-----~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ..+|||+++  +.+|.+.+..+.     ..    -.++.+|...|..+|...
T Consensus        82 ~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~  131 (279)
T 2w5a_A           82 LYIVMEYCE--GGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS  131 (279)
T ss_dssp             EEEEEECCT--TEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             EEEEEeCCC--CCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhccc
Confidence            689999997  357777765431     22    257888899999999755

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=96.32  E-value=0.021  Score=47.12  Aligned_cols=108  Identities=17%  Similarity=0.061  Sum_probs=73.5

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -++.||.|...-||++... +| .++||.-.......    .-..++...|.++|+.+.  .|. +++++.  .|.....
T Consensus        45 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~E~~~l~~l~--hp~-iv~~~~~~~~~~~~~  117 (350)
T 1rdq_E           45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK----LKQIEHTLNEKRILQAVN--FPF-LVKLEFSFKDNSNLY  117 (350)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH----TTCHHHHHHHHHHHTTCC--CTT-BCCEEEEEECSSEEE
T ss_pred             EEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhcc----HHHHHHHHHHHHHHHhCC--CCC-CCeEEEEEEcCCEEE
Confidence            5788999999999999986 45 89999764432111    123467788888887663  233 444443  3566778


Q ss_pred             EEEecCCCCchHHHHHHHcCC-CCH----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGI-KYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~-~~~----~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  +..|.+.+.+.. ...    .++.+|...|.-+|...
T Consensus       118 lv~e~~~--gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  161 (350)
T 1rdq_E          118 MVMEYVA--GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD  161 (350)
T ss_dssp             EEEECCT--TCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEcCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997  346777776533 322    46788888999999753

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=96.32  E-value=0.03  Score=47.25  Aligned_cols=106  Identities=14%  Similarity=0.070  Sum_probs=75.2

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC------
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR------  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~------  107 (165)
                      -.+.||.|....||++.+. +| .|+||.-..-..     -.....|...|..+|+.+..   .++.+++.+-.      
T Consensus        30 ~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h---~nIv~l~~~~~~~~~~~  101 (432)
T 3n9x_A           30 IKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFE-----DLIDCKRILREITILNRLKS---DYIIRLYDLIIPDDLLK  101 (432)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTT-----SHHHHHHHHHHHHHHHHCCC---TTBCCEEEECCCSCTTT
T ss_pred             EEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhc-----ChHHHHHHHHHHHHHHHcCC---CCcceEEEEEecCCCCc
Confidence            5678999999999999876 45 799997653221     12345688899999988852   34555555432      


Q ss_pred             -CCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          108 -TMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 -e~~~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                       ....+|||+++  . .|.+.+..+..+     -.++.+|...|.-+|...
T Consensus       102 ~~~~~lv~e~~~--~-~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~g  149 (432)
T 3n9x_A          102 FDELYIVLEIAD--S-DLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESG  149 (432)
T ss_dssp             CCCEEEEEECCS--E-EHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCeEEEEEecCC--c-CHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             34689999987  3 788888776533     257788888999999764

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=96.32  E-value=0.014  Score=46.71  Aligned_cols=107  Identities=17%  Similarity=0.056  Sum_probs=68.5

Q ss_pred             CCcc-eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-----
Q 045250           32 FDDL-TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-----  105 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-----  105 (165)
                      .+.+ -.+.||.|....||++...+..++||.-...          ...+...|.++++. ..+--.++.+++.+     
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~----------~~~~~~~e~~~~~~-~~~~h~~i~~~~~~~~~~~   80 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFA----------NRQNFINEKNIYRV-PLMEHDNIARFIVGDERVT   80 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGG----------GHHHHHHHHHHHTS-TTCCCTTBCCEEEEEEEEC
T ss_pred             hHHhheeeecccCCCeEEEEEEECCeEEEEEEeecc----------chhhHHHHHHHHHH-HhccCcchhhheecccccc
Confidence            3444 5788999999999999875448999974311          12344455555432 22222344455431     


Q ss_pred             cC--CCceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhc
Q 045250          106 DR--TMSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       106 D~--e~~~~vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~  151 (165)
                      ..  ....+|||+++  +.+|.+.+..+...    -.++.+|...|+-+|..
T Consensus        81 ~~~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~  130 (336)
T 3g2f_A           81 ADGRMEYLLVMEYYP--NGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTE  130 (336)
T ss_dssp             TTSCEEEEEEECCCT--TCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCC
T ss_pred             cCCCceEEEEEecCC--CCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhh
Confidence            11  13469999997  45788888665543    25788999999999976

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=96.30  E-value=0.031  Score=47.76  Aligned_cols=107  Identities=11%  Similarity=0.061  Sum_probs=74.2

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -++.||.|....||++.+. +| .++||.-......     .-...+...|.++|+.+..  |. +++++.  .+.....
T Consensus        26 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~E~~~l~~l~h--pn-iv~~~~~~~~~~~~~   97 (486)
T 3mwu_A           26 IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-----NKDTSTILREVELLKKLDH--PN-IMKLFEILEDSSSFY   97 (486)
T ss_dssp             EEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHB-----CSCHHHHHHHHHHHHHCCC--TT-BCCEEEEEECSSEEE
T ss_pred             EeEEEeecCCEEEEEEEECCCCCEEEEEEEeccccc-----chHHHHHHHHHHHHHhCCC--CC-cCeEEEEEEcCCEEE
Confidence            4788999999999999986 45 7999976433221     1245788899999988742  43 444443  3556678


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  +..|.+.+.....+ .    .++.+|...|.-+|...
T Consensus        98 lv~e~~~--~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~  141 (486)
T 3mwu_A           98 IVGELYT--GGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN  141 (486)
T ss_dssp             EEECCCC--SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEcCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  34566666554333 2    57788888888899653

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=96.30  E-value=0.03  Score=43.91  Aligned_cols=106  Identities=15%  Similarity=0.122  Sum_probs=70.3

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~  111 (165)
                      .++.+|.|....||++.+. +| .++||........     .-..++...|.++|+.+.   -.++++++.+  +.+...
T Consensus         7 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~   78 (299)
T 2r3i_A            7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET-----EGVPSTAIREISLLKELN---HPNIVKLLDVIHTENKLY   78 (299)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEC-------------CCHHHHHHHHHHTTCC---CTTBCCEEEEEEETTEEE
T ss_pred             hhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccc-----hhhHHHHHHHHHHHHHcC---CCCeeeEEEEEecCCceE
Confidence            4678999999999999886 45 8999976533221     123367778888887663   2345555543  556678


Q ss_pred             EEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  . .|.+.+....   ..    -.++.+|...|..+|...
T Consensus        79 lv~e~~~--~-~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  123 (299)
T 2r3i_A           79 LVFEFLH--Q-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR  123 (299)
T ss_dssp             EEEECCS--E-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEccc--C-CHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997  2 6777766542   22    256788899999999763

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=96.30  E-value=0.026  Score=46.31  Aligned_cols=108  Identities=14%  Similarity=0.065  Sum_probs=73.7

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      -++.||.|...-||++... +| .++||.-.......    .-...+...|.++|+.+.  .|. +++++  +.+.+...
T Consensus         9 ~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~~~~~~E~~~l~~l~--hp~-iv~l~~~~~~~~~~~   81 (337)
T 1o6l_A            9 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA----KDEVAHTVTESRVLQNTR--HPF-LTALKYAFQTHDRLC   81 (337)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH----TTCHHHHHHHHHHHHSCC--CTT-BCCEEEEEECSSEEE
T ss_pred             EEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhh----hhHHHHHHHHHHHHHhCC--CCc-CcceEEEEEeCCEEE
Confidence            4678999999999999876 45 79999865433211    124567888888887653  243 33333  34566778


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  +..|.+.+.....+ .    .++.+|...|.-+|...
T Consensus        82 lv~E~~~--gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  125 (337)
T 1o6l_A           82 FVMEYAN--GGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD  125 (337)
T ss_dssp             EEEECCT--TCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeCCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  34676766654433 2    46778888899999753

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=96.29  E-value=0.043  Score=43.63  Aligned_cols=105  Identities=13%  Similarity=0.025  Sum_probs=72.3

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-------
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD-------  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-------  106 (165)
                      -++.||.|....||++.+. +| .++||.....        ....++...|..+|+.+... |. +++++.+-       
T Consensus        28 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--------~~~~~~~~~e~~~l~~l~~h-~~-i~~~~~~~~~~~~~~   97 (326)
T 2x7f_A           28 LVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT--------GDEEEEIKQEINMLKKYSHH-RN-IATYYGAFIKKNPPG   97 (326)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------SSTTHHHHHHHHHHHHHCCS-TT-BCCEEEEEEECC--C
T ss_pred             EEEEeccCCCEEEEEEEECCCCCeEEEEEEecC--------cccHHHHHHHHHHHHhccCC-CC-eeeeeeEEeeccCcc
Confidence            5688999999999999985 45 7999975321        12346788898888877542 33 44444332       


Q ss_pred             -CCCceEEEecCCCCchHHHHHHHcC---CCCH----HHHHHHHHHHHHHHhcc
Q 045250          107 -RTMSLIGMRYLEPPHIILRKGLIAG---IKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 -~e~~~~vMEdl~~~~~~lr~~l~~g---~~~~----~~a~~iG~~La~~h~~t  152 (165)
                       .....+|||+++  ...|.+.+...   ....    .++.+|...|+.+|...
T Consensus        98 ~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  149 (326)
T 2x7f_A           98 MDDQLWLVMEFCG--AGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK  149 (326)
T ss_dssp             CCCEEEEEEECCT--TEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccceEEEEEEcCC--CCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             346789999998  45777777652   2222    47788899999999753

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=96.29  E-value=0.026  Score=49.00  Aligned_cols=103  Identities=15%  Similarity=0.171  Sum_probs=70.2

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV--YHFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~e~~~  111 (165)
                      -.+.||.|....||++.+. +| .|+||.....         ....+...|.++|+.+...  ..+|.+  +..+.+...
T Consensus        11 i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~---------~~~~~~~~E~~il~~L~~~--~~i~~i~~~~~~~~~~~   79 (483)
T 3sv0_A           11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK---------TKHPQLLYESKIYRILQGG--TGIPNVRWFGVEGDYNV   79 (483)
T ss_dssp             CCCCCEECSSCEEEEEEETTTCCEEEEEEEETT---------CSSCCHHHHHHHHHHTTTS--TTCCCEEEEEEETTEEE
T ss_pred             EEEEEeeCCCEEEEEEEECCCCcEEEEEEeccc---------cccHHHHHHHHHHHHhcCC--CCCCeEEEEEeeCCEEE
Confidence            4567899999999999975 45 8999942211         1123577899999888753  334444  445667778


Q ss_pred             EEEecCCCCchHHHHHHHc--CCCC----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIA--GIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~--g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++.   .|.+.+..  +...    -.++.+|...|.-+|...
T Consensus        80 lvme~~g~---sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g  123 (483)
T 3sv0_A           80 LVMDLLGP---SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKS  123 (483)
T ss_dssp             EEEECCCC---BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEECCCC---CHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999963   56666652  3332    257888899999999653

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=96.29  E-value=0.026  Score=45.43  Aligned_cols=110  Identities=15%  Similarity=0.120  Sum_probs=73.0

Q ss_pred             Ccc-eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC
Q 045250           33 DDL-TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DR  107 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~  107 (165)
                      +.. .++.||.|....||++.+.. | .++||.-....     .-.....+...|.++|+.+..  | ++++++.+  +.
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~E~~~l~~l~h--~-~iv~~~~~~~~~   96 (331)
T 4aaa_A           25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD-----DDKMVKKIAMREIKLLKQLRH--E-NLVNLLEVCKKK   96 (331)
T ss_dssp             GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCS-----SCHHHHHHHHHHHHHHHHCCC--T-TBCCEEEEEEET
T ss_pred             hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCC-----CchHHHHHHHHHHHHHhhCCC--C-CEeeEEEEeecC
Confidence            344 67889999999999999863 5 79999653211     111223455678888887752  3 44555544  44


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          108 TMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 e~~~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ....+|||+++  ...+...+......     -.++.+|...|+.+|...
T Consensus        97 ~~~~lv~e~~~--~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  144 (331)
T 4aaa_A           97 KRWYLVFEFVD--HTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN  144 (331)
T ss_dssp             TEEEEEEECCS--EEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEEEecCC--cchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            55689999998  45776665544332     257788889999999764

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=96.28  E-value=0.038  Score=49.46  Aligned_cols=106  Identities=20%  Similarity=0.034  Sum_probs=74.7

Q ss_pred             EeccCCceeEEEEEEeC---CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEE
Q 045250           38 KEVGDGNLNFVYIVVGT---SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIG  113 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~---~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~v  113 (165)
                      ..||.|..-.||++...   .+ .+.||.-.....     -....++...|+++|+.+.  -|..+.-.-.++.+...+|
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~-----~~~~~~~~~~E~~il~~l~--hpnIv~l~~~~~~~~~~lv  447 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-----DPALKDELLAEANVMQQLD--NPYIVRMIGICEAESWMLV  447 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGG-----CGGGHHHHHHHHHHHHHCC--CTTBCCEEEEEESSSEEEE
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccC-----CHHHHHHHHHHHHHHHhCC--CCCEeeEEEEEecCCEEEE
Confidence            46999999999998543   33 688996643322     1233467888999999885  2555544445566677899


Q ss_pred             EecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  ...|.+.+..+..+     -.++.+|...|+-+|...
T Consensus       448 ~E~~~--~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~  489 (635)
T 4fl3_A          448 MEMAE--LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN  489 (635)
T ss_dssp             EECCT--TEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEccC--CCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99998  45788888765533     257888999999999764

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=96.28  E-value=0.035  Score=45.77  Aligned_cols=106  Identities=13%  Similarity=0.022  Sum_probs=71.2

Q ss_pred             eeEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c
Q 045250           36 TIKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--D  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D  106 (165)
                      -++.||.|....||++...      ++ .|+||.-.....      .-...+...|+.+|+.+..  | ++++++.+  +
T Consensus        75 ~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~h--p-nIv~~~~~~~~  145 (367)
T 3l9p_A           75 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS------EQDELDFLMEALIISKFNH--Q-NIVRCIGVSLQ  145 (367)
T ss_dssp             EEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCC------HHHHHHHHHHHHHHHHCCC--T-TBCCEEEEECS
T ss_pred             EeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccC------hhhHHHHHHHHHHHHhCCC--C-CCCeEEEEEec
Confidence            4678999999999999842      34 699998643211      1123456678888877632  3 34445544  4


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCC--------CC----HHHHHHHHHHHHHHHhcc
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLIAGI--------KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~~g~--------~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .....+|||+++  +.+|.+.+....        ..    -.++.+|...|+-+|...
T Consensus       146 ~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  201 (367)
T 3l9p_A          146 SLPRFILLELMA--GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH  201 (367)
T ss_dssp             SSSCEEEEECCT--TEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEEeCC--CCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC
Confidence            556789999997  357777776532        21    257889999999999764

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=96.28  E-value=0.018  Score=46.40  Aligned_cols=103  Identities=13%  Similarity=0.000  Sum_probs=67.7

Q ss_pred             eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCC------
Q 045250           36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTM------  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~------  109 (165)
                      -.+.||.|....||++...+..++||.-...-.        ...+...|...|+.+   --.++.+++.+-.+.      
T Consensus        28 ~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~--------~~~~~~~E~~~l~~l---~hpniv~~~~~~~~~~~~~~~   96 (322)
T 3soc_A           28 LLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDK--------QSWQNEYEVYSLPGM---KHENILQFIGAEKRGTSVDVD   96 (322)
T ss_dssp             EEEEEECSTTCEEEEEEETTEEEEEEEECGGGH--------HHHHHHHHHHTSTTC---CCTTBCCEEEEEEEECSSSEE
T ss_pred             hhheecccCceEEEEEEECCCEEEEEEeecCch--------HHHHHHHHHHHHhcC---CCCCchhhcceeccCCCCCce
Confidence            567899999999999998754899997532111        112333344444433   234555666553332      


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~  151 (165)
                      ..+|||+++  ..+|.+.+..+....    .++.+|...|+-+|..
T Consensus        97 ~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~  140 (322)
T 3soc_A           97 LWLITAFHE--KGSLSDFLKANVVSWNELCHIAETMARGLAYLHED  140 (322)
T ss_dssp             EEEEEECCT--TCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCC
T ss_pred             EEEEEecCC--CCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhh
Confidence            379999998  457888887765432    5778888889989876

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=96.27  E-value=0.03  Score=47.61  Aligned_cols=103  Identities=13%  Similarity=0.020  Sum_probs=72.9

Q ss_pred             eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC-CceE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRT-MSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e-~~~~  112 (165)
                      -.+.||.|....||++...+..++||....-         ...++...|+++|+.+..  |. +.+++.+  +.+ ...+
T Consensus       197 ~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~---------~~~~~~~~E~~~l~~l~h--~n-iv~~~~~~~~~~~~~~i  264 (450)
T 1k9a_A          197 LLQTIGKGEFGDVMLGDYRGNKVAVKCIKND---------ATAQAFLAEASVMTQLRH--SN-LVQLLGVIVEEKGGLYI  264 (450)
T ss_dssp             EEEEEEECSSEEEEEEEETTEEEEEEEESSC---------TTSHHHHHHHHHHHTCCC--TT-BCCEEEEEECTTSCEEE
T ss_pred             EEeeecCcCCeeEEEEEecCCeEEEEEeCCc---------hHHHHHHHHHHHHHhccC--CC-EEEEEEEEEcCCCceEE
Confidence            3678999999999999886448999975421         134678889999987742  43 4445543  443 5689


Q ss_pred             EEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||+++  +.+|.+.+.+..   ..    -.++.+|...|+-+|...
T Consensus       265 v~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  309 (450)
T 1k9a_A          265 VTEYMA--KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN  309 (450)
T ss_dssp             EEECCT--TCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecC--CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999998  347777776532   12    257889999999999753

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=96.25  E-value=0.068  Score=42.23  Aligned_cols=103  Identities=18%  Similarity=0.200  Sum_probs=68.2

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      .++.+|.|....||++... +| .++||.-...         -...+...|.++|+.+..  | ++++++.  .+.....
T Consensus        33 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~---------~~~~~~~~e~~~l~~l~h--~-~i~~~~~~~~~~~~~~  100 (314)
T 3com_A           33 VLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE---------SDLQEIIKEISIMQQCDS--P-HVVKYYGSYFKNTDLW  100 (314)
T ss_dssp             EEEECC----CEEEEEEETTTCCEEEEEEEETT---------SCCHHHHHHHHHHHTCCC--T-TBCCEEEEEEETTEEE
T ss_pred             hheeeccCCCeEEEEEEECCCCCEEEEEecCch---------HHHHHHHHHHHHHHhCCC--C-CCccEEEEEEeCCEEE
Confidence            5678999999999999886 35 7999975421         134678888888887632  3 4445554  3456678


Q ss_pred             EEEecCCCCchHHHHHHHc--CCCC----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIA--GIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~--g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  ...|.+.+..  +...    -.++.+|...|..+|...
T Consensus       101 lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~  145 (314)
T 3com_A          101 IVMEYCG--AGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMR  145 (314)
T ss_dssp             EEEECCT--TEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEeecCC--CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999998  3577776652  2222    257888889999999753

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=96.25  E-value=0.051  Score=43.70  Aligned_cols=104  Identities=14%  Similarity=0.168  Sum_probs=73.0

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC------
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR------  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~------  107 (165)
                      -.+.+|.|....||++... +| .++||.-.+.-.      +....+...|.++|+.+.   -.++++++.+-.      
T Consensus        15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~   85 (353)
T 2b9h_A           15 LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDK------PLFALRTLREIKILKHFK---HENIITIFNIQRPDSFEN   85 (353)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSS------HHHHHHHHHHHHHHHHCC---CTTBCCEEEECCCSCSTT
T ss_pred             EeeEEcCCCCeEEEEEEECCCCcEEEEEeeccccc------chHHHHHHHHHHHHHhCc---CCCcCCeeeeecccccCc
Confidence            5678999999999999986 45 799997653221      123356677888888774   234555665432      


Q ss_pred             -CCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhc
Q 045250          108 -TMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       108 -e~~~~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~  151 (165)
                       ....+|||+++  . .|.+.+..+....    .++.+|...|+-+|..
T Consensus        86 ~~~~~lv~e~~~--~-~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~  131 (353)
T 2b9h_A           86 FNEVYIIQELMQ--T-DLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS  131 (353)
T ss_dssp             CCCEEEEECCCS--E-EHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cceEEEEEeccC--c-cHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHC
Confidence             45689999998  2 6777777665443    5778888999999975

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=96.24  E-value=0.025  Score=45.69  Aligned_cols=115  Identities=14%  Similarity=0.022  Sum_probs=74.8

Q ss_pred             CCcc-eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC
Q 045250           32 FDDL-TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRT  108 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e  108 (165)
                      ...+ -++.||.|....||++... +| .+.+|.+...++.  ....-...+...|..+|+.+..  |..++-.-.+...
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~--~~~~~~~~~~~~E~~~l~~l~h--p~iv~~~~~~~~~   89 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDEAYVMASVDN--PHVCRLLGICLTS   89 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECC--CSSCCCHHHHHHHHHHHTTCCB--TTBCCCCEEEESS
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecc--ccCHHHHHHHHHHHHHHHhCCC--CCeeEEEEEEecC
Confidence            3445 5788999999999999864 34 4444444433332  2233456788889999887752  4444433334456


Q ss_pred             CceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250          109 MSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ...++||++.  ...|.+.+....  ..    -.++.+|...|.-+|...
T Consensus        90 ~~~~v~~~~~--~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  137 (327)
T 3lzb_A           90 TVQLITQLMP--FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR  137 (327)
T ss_dssp             SEEEEECCCS--SCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CceEEEEecC--CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            6789999998  346777776532  22    257788899999999764

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=96.23  E-value=0.028  Score=44.16  Aligned_cols=106  Identities=15%  Similarity=0.124  Sum_probs=69.2

Q ss_pred             eeEeccCCceeEEEEEEeCC--C---eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE---cC
Q 045250           36 TIKEVGDGNLNFVYIVVGTS--G---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF---DR  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~--g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~---D~  107 (165)
                      -.+.||.|....||++...+  +   .+.||.......      .-..++...|..+|+.+..  |. +.+++.+   +.
T Consensus        29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~------~~~~~~~~~E~~~l~~l~h--~~-iv~~~~~~~~~~   99 (298)
T 3f66_A           29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD------IGEVSQFLTEGIIMKDFSH--PN-VLSLLGICLRSE   99 (298)
T ss_dssp             EEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCS------HHHHHHHHHHHHHHHTCCC--TT-BCCCCEEECCSS
T ss_pred             hcceeeecCCceEEEEEEecCCCceeEEEEEecccCCC------HHHHHHHHHHHHHHHhCCC--CC-EeeeeeEEEcCC
Confidence            35789999999999998642  2   367777553211      1123567778888877642  43 4444443   34


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250          108 TMSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 e~~~~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ....+|||+++  +.+|.+.+....  ..    -.++.+|...|+.+|...
T Consensus       100 ~~~~~v~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~  148 (298)
T 3f66_A          100 GSPLVVLPYMK--HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK  148 (298)
T ss_dssp             SCCEEEEECCT--TCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CceEEEEeCCC--CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            56689999998  457888886532  22    246778899999999763

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=96.21  E-value=0.018  Score=47.69  Aligned_cols=109  Identities=15%  Similarity=0.043  Sum_probs=74.5

Q ss_pred             eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -++.||.|...-||++.... | .+.||.-.......    .-..++...|..+|+....  ..++++++.  .+.+...
T Consensus        24 ~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~----~~~~~~~~~E~~~l~~~~~--hp~iv~l~~~~~~~~~~~   97 (353)
T 2i0e_A           24 FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ----DDDVECTMVEKRVLALPGK--PPFLTQLHSCFQTMDRLY   97 (353)
T ss_dssp             EEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHH----TTCHHHHHHHHHHHTCTTC--CTTBCCEEEEEECSSEEE
T ss_pred             EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhc----chHHHHHHHHHHHHHhcCC--CCEEeeEEEEEEcCCEEE
Confidence            56789999999999999864 4 78999765433211    1245677888888866543  234444443  3556778


Q ss_pred             EEEecCCCCchHHHHHHHc-CCCCH----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIA-GIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~-g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  +..|.+.+.+ +....    .++.+|...|.-+|...
T Consensus        98 lv~E~~~--gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~g  141 (353)
T 2i0e_A           98 FVMEYVN--GGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG  141 (353)
T ss_dssp             EEEECCC--SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeCCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  3477777765 33322    46788888899999753

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=96.21  E-value=0.011  Score=48.22  Aligned_cols=108  Identities=19%  Similarity=0.161  Sum_probs=72.3

Q ss_pred             Ccc-eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC
Q 045250           33 DDL-TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDR  107 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~  107 (165)
                      +.+ -++.||.|....||++.+. +| .+++|.......      .-...+...|.++|+.+.   -.++++++.  .+.
T Consensus        33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~------~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~  103 (360)
T 3eqc_A           33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK------PAIRNQIIRELQVLHECN---SPYIVGFYGAFYSD  103 (360)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCC------HHHHHHHHHHHGGGGGCC---CTTBCCEEEEEEET
T ss_pred             ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccC------HHHHHHHHHHHHHHHHCC---CCCEEEEeEEEEEC
Confidence            344 6788999999999999987 45 788887643211      112345666777776553   234555554  456


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCC-CH----HHHHHHHHHHHHHHhc
Q 045250          108 TMSLIGMRYLEPPHIILRKGLIAGIK-YP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       108 e~~~~vMEdl~~~~~~lr~~l~~g~~-~~----~~a~~iG~~La~~h~~  151 (165)
                      ....+|||+++  +.+|.+.+..... ..    .++.+|...|+.+|..
T Consensus       104 ~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~  150 (360)
T 3eqc_A          104 GEISICMEHMD--GGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK  150 (360)
T ss_dssp             TEEEEEECCCT--TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEEEECCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            67789999997  3577777765432 22    5777888888889864

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=96.21  E-value=0.019  Score=46.52  Aligned_cols=108  Identities=11%  Similarity=0.027  Sum_probs=71.3

Q ss_pred             eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~  111 (165)
                      ..+.||.|....||++.+.+ + .+++|........    -.-..++...|..+|+.+.   -.++++++.+  +.+...
T Consensus        45 ~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~----~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~  117 (335)
T 2owb_A           45 RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLL----KPHQREKMSMEISIHRSLA---HQHVVGFHGFFEDNDFVF  117 (335)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC----SHHHHHHHHHHHHHHHTCC---CTTBCCEEEEEECSSEEE
T ss_pred             EEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhc----CHHHHHHHHHHHHHHHhCC---CCCCCeEEEEEecCCeEE
Confidence            46778999999999999874 4 6888875433211    0122356667777777663   2345555544  555678


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  +..|.+.+..+..+     -.++.+|...|..+|...
T Consensus       118 lv~e~~~--~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  161 (335)
T 2owb_A          118 VVLELCR--RRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR  161 (335)
T ss_dssp             EEECCCT--TCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecCC--CCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  34666666554332     257888899999999753

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=96.21  E-value=0.015  Score=47.47  Aligned_cols=112  Identities=13%  Similarity=0.130  Sum_probs=75.6

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCC--CCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCC
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESW--PMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTM  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~--~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~  109 (165)
                      .++.||.|....||++.+. +| .++||.-...... ...|  .-...+...|+++|+.+..  | ++++++.  .+...
T Consensus        28 ~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~~~~~E~~~l~~l~h--~-~Iv~~~~~~~~~~~  103 (335)
T 3dls_A           28 TMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVL-EDCWIEDPKLGKVTLEIAILSRVEH--A-NIIKVLDIFENQGF  103 (335)
T ss_dssp             EEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSC-TTSEEEETTTEEEEHHHHHHTTCCC--T-TBCCEEEEEECSSE
T ss_pred             EEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcc-cccccchHHHHHHHHHHHHHHhCCC--C-CEeeEEEEEeeCCE
Confidence            5678999999999999875 45 7999976543221 1111  1133466779999887742  3 3444443  34556


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      ..+|||+++ .+..|.+.+..+..+ .    .++.+|...|+-+|...
T Consensus       104 ~~lv~e~~~-~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~  150 (335)
T 3dls_A          104 FQLVMEKHG-SGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKD  150 (335)
T ss_dssp             EEEEEECCT-TSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEEeCC-CCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            679999998 466788888776433 2    47788888999999753

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=96.21  E-value=0.041  Score=44.03  Aligned_cols=109  Identities=14%  Similarity=0.037  Sum_probs=70.7

Q ss_pred             Ccc-eeEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE
Q 045250           33 DDL-TIKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH  104 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~  104 (165)
                      ..+ -++.||.|....||++...      ++ .++||.-.....      .-...+...|..+|+.+.  .| ++++++.
T Consensus        30 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~--h~-~iv~~~~  100 (327)
T 2yfx_A           30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS------EQDELDFLMEALIISKFN--HQ-NIVRCIG  100 (327)
T ss_dssp             GGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCC------HHHHHHHHHHHHHHHHCC--CT-TBCCEEE
T ss_pred             hheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccc------hhhHHHHHHHHHHHhhCC--CC-CCCeEEE
Confidence            344 5688999999999999842      34 799998753221      122346677888887763  23 3444554


Q ss_pred             E--cCCCceEEEecCCCCchHHHHHHHcCC--------CC----HHHHHHHHHHHHHHHhcc
Q 045250          105 F--DRTMSLIGMRYLEPPHIILRKGLIAGI--------KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       105 ~--D~e~~~~vMEdl~~~~~~lr~~l~~g~--------~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +  +.....+|||+++  +.+|.+.+....        ..    -.++.+|...|..+|...
T Consensus       101 ~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~  160 (327)
T 2yfx_A          101 VSLQSLPRFILMELMA--GGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH  160 (327)
T ss_dssp             EECSSSSCEEEEECCT--TEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEcCCCCcEEEEecCC--CCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC
Confidence            4  3456689999997  457888877643        21    257889999999999763

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=96.20  E-value=0.038  Score=47.51  Aligned_cols=111  Identities=14%  Similarity=0.132  Sum_probs=70.2

Q ss_pred             eeEeccCCceeEEEEEEeCC-C-eEEEEecCcccccc------CCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCI------GESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--  105 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~------~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--  105 (165)
                      -++.||.|..-.||++.... + .++||.-.......      .....-..++...|.++|+.+..  | ++++++.+  
T Consensus        40 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--p-niv~~~~~~~  116 (504)
T 3q5i_A           40 KVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDH--P-NIIKLFDVFE  116 (504)
T ss_dssp             EEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCC--T-TBCCEEEEEE
T ss_pred             EEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCC--C-CCCeEEEEEE
Confidence            57899999999999999863 4 78888754322100      01112345677888888887742  4 34455543  


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhc
Q 045250          106 DRTMSLIGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       106 D~e~~~~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~  151 (165)
                      +.....+|||+++  +..|.+.+.....+ .    .++.+|...|+-+|..
T Consensus       117 ~~~~~~lv~e~~~--gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~  165 (504)
T 3q5i_A          117 DKKYFYLVTEFYE--GGELFEQIINRHKFDECDAANIMKQILSGICYLHKH  165 (504)
T ss_dssp             CSSEEEEEEECCT--TCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCEEEEEEecCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            5556789999998  34666666554332 2    5778888899999965

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=96.20  E-value=0.033  Score=46.81  Aligned_cols=109  Identities=15%  Similarity=0.088  Sum_probs=75.7

Q ss_pred             eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EEcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY-HFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~D~e~~~~  112 (165)
                      -++.||.|....||++.... | .++||.-....-..    .-...+...|.++|+.+.  .|..++-.. +.+.+...+
T Consensus        19 i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~----~~~~~~~~~E~~il~~l~--hp~Iv~l~~~~~~~~~~~l   92 (384)
T 4fr4_A           19 ILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVE----RNEVRNVFKELQIMQGLE--HPFLVNLWYSFQDEEDMFM   92 (384)
T ss_dssp             EEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHH----TTCHHHHHHHHHHHHTCC--CTTBCCEEEEEECSSEEEE
T ss_pred             EEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhccc----HHHHHHHHHHHHHHHhCC--CCCCCcEEEEEEeCCEEEE
Confidence            56889999999999998763 4 68889754332111    124567788999998773  244444333 336677889


Q ss_pred             EEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t  152 (165)
                      |||++.  +..|+..+..+..++     .++.+|...|.-+|...
T Consensus        93 v~e~~~--gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~g  135 (384)
T 4fr4_A           93 VVDLLL--GGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQR  135 (384)
T ss_dssp             EECCCT--TEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEecCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999998  458888887765432     46778888999999753

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=96.20  E-value=0.015  Score=45.96  Aligned_cols=112  Identities=12%  Similarity=0.087  Sum_probs=66.4

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCC-------------------CCChHHHHHHHHHHHHhhcc
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESW-------------------PMTKERAYFEALALKEHGKL   94 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~-------------------~l~~~R~~~E~~~L~~~~~~   94 (165)
                      -.+.||.|....||++.+. +| .++||.-.........++                   .-..++...|.++|+.+.. 
T Consensus        17 ~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-   95 (298)
T 2zv2_A           17 LKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDH-   95 (298)
T ss_dssp             EEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCC-
T ss_pred             EEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCC-
Confidence            4678999999999999876 45 799997654321100111                   1123567788888887742 


Q ss_pred             CCCCCceEEEE--c--CCCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250           95 CPDHVPEVYHF--D--RTMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus        95 ~p~~vP~v~~~--D--~e~~~~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                       | ++++++.+  +  .....+|||+++.  ..|.+.+..+....    .++.+|...|+-+|...
T Consensus        96 -~-~iv~~~~~~~~~~~~~~~lv~e~~~~--~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  157 (298)
T 2zv2_A           96 -P-NVVKLVEVLDDPNEDHLYMVFELVNQ--GPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQK  157 (298)
T ss_dssp             -T-TBCCEEEEEECSSSSEEEEEEECCTT--CBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -C-CCCeEEEEEEcCCCCEEEEEEecCCC--CcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             3 44555544  3  3456899999972  24444332333322    47788899999999753

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=96.19  E-value=0.015  Score=48.87  Aligned_cols=104  Identities=17%  Similarity=0.142  Sum_probs=71.3

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -++.||.|....||++.+. +| .+++|.....       ......+...|.++|+.+..  | ++++++.  .+.....
T Consensus        55 i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-------~~~~~~~~~~E~~il~~l~h--p-nIv~~~~~~~~~~~~~  124 (387)
T 1kob_A           55 ILEELGSGAFGVVHRCVEKATGRVFVAKFINTP-------YPLDKYTVKNEISIMNQLHH--P-KLINLHDAFEDKYEMV  124 (387)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------SHHHHHHHHHHHHHHTTCCS--T-TBCCEEEEEECSSEEE
T ss_pred             EEEEEecCCCEEEEEEEECCCCCEEEEEEeccc-------chhhHHHHHHHHHHHHhCCC--c-CCCeEEEEEEeCCEEE
Confidence            5678999999999999886 45 7888865321       12233567778888876532  3 4444544  3567788


Q ss_pred             EEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhc
Q 045250          112 IGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~  151 (165)
                      +|||+++  +..|.+.+....  ..    -.++.+|...|.-+|..
T Consensus       125 lv~E~~~--gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~  168 (387)
T 1kob_A          125 LILEFLS--GGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH  168 (387)
T ss_dssp             EEEECCC--CCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEcCC--CCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999998  347777776532  22    25778889999999965

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=96.18  E-value=0.083  Score=41.06  Aligned_cols=108  Identities=15%  Similarity=0.142  Sum_probs=63.1

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -++.||.|....||++.+. +| .++||.-......      -...+...|...  ....+--.++++++.  .+.....
T Consensus        11 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~~~~--~~~~~~h~~iv~~~~~~~~~~~~~   82 (290)
T 3fme_A           11 PIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS------QEQKRLLMDLDI--SMRTVDCPFTVTFYGALFREGDVW   82 (290)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CH------HHHHHHHHHHHH--HHTTCCCTTBCCEEEEEECSSSEE
T ss_pred             hHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCc------HHHHHHHHHHHH--HHHhCCCCeEEEEeeeeeccCCEE
Confidence            5778999999999999985 45 8999976533211      011122222222  222222234455543  4667788


Q ss_pred             EEEecCCCCc-hHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhc
Q 045250          112 IGMRYLEPPH-IILRKGLIAGIKY-P----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdl~~~~-~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~  151 (165)
                      +|||+++.+. ..++.....+... .    .++.+|...|+-+|..
T Consensus        83 lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~  128 (290)
T 3fme_A           83 ICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK  128 (290)
T ss_dssp             EEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence            9999998311 1233333334333 2    5788889999999976

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=96.16  E-value=0.018  Score=45.23  Aligned_cols=109  Identities=15%  Similarity=0.020  Sum_probs=70.8

Q ss_pred             ccee-EeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc----
Q 045250           34 DLTI-KEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD----  106 (165)
Q Consensus        34 ~~~v-~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D----  106 (165)
                      .+.+ ..||.|....||++.+.. + .+.+|.-......     .-...+...|..+|+.+.   -.++++++.+-    
T Consensus        27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~-----~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~   98 (290)
T 1t4h_A           27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-----KSERQRFKEEAEMLKGLQ---HPNIVRFYDSWESTV   98 (290)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-----HHHHHHHHHHHHHHTTCC---CTTBCCEEEEEEEES
T ss_pred             eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhC-----HHHHHHHHHHHHHHHhCC---CCCeeeeeeeecccc
Confidence            3444 459999999999998863 4 6777765432211     122356667777777663   23455555432    


Q ss_pred             --CCCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          107 --RTMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 --~e~~~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                        .....+|||+++  ..+|++.+......     -.++.+|...|+-+|...
T Consensus        99 ~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  149 (290)
T 1t4h_A           99 KGKKCIVLVTELMT--SGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT  149 (290)
T ss_dssp             SSCEEEEEEEECCC--SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred             CCCceEEEEEEecC--CCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence              233689999997  35788877763332     246788899999999765

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=96.16  E-value=0.041  Score=46.48  Aligned_cols=102  Identities=18%  Similarity=0.099  Sum_probs=69.2

Q ss_pred             eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~  112 (165)
                      ..+.||.|....||.....+| .|.||+-...          ..++...|.++|+..... |. +++++.+  +.....+
T Consensus        19 ~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~----------~~~~~~~E~~~l~~l~~H-pn-Iv~~~~~~~~~~~~~l   86 (434)
T 2rio_A           19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLID----------FCDIALMEIKLLTESDDH-PN-VIRYYCSETTDRFLYI   86 (434)
T ss_dssp             EEEEEEECSTTCEEEEEESSSSEEEEEEEEGG----------GHHHHHHHHHHHHHHTTS-TT-BCCEEEEEECSSEEEE
T ss_pred             ccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH----------HHHHHHHHHHHHHhccCC-CC-cCeEEEEEecCCeEEE
Confidence            456799888888876666666 8999975421          125677899988866443 33 4445544  3445578


Q ss_pred             EEecCCCCchHHHHHHHcCCCC------------HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKY------------PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~------------~~~a~~iG~~La~~h~~t  152 (165)
                      |||+++  + +|.+.+..+...            -.++.+|...|+-+|...
T Consensus        87 v~E~~~--g-sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  135 (434)
T 2rio_A           87 ALELCN--L-NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK  135 (434)
T ss_dssp             EECCCS--E-EHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT
T ss_pred             EEecCC--C-CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC
Confidence            999997  3 788877765422            148999999999999753

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=96.16  E-value=0.038  Score=44.58  Aligned_cols=86  Identities=14%  Similarity=0.018  Sum_probs=56.9

Q ss_pred             eeEeccCCceeEEEEEEe-----C-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c
Q 045250           36 TIKEVGDGNLNFVYIVVG-----T-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--D  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~-----~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D  106 (165)
                      -.+.||.|..-.||++..     . ++ .++||.-..-..      .-...+...|.++|+.+... |. +.+++.+  +
T Consensus        26 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-pn-iv~~~~~~~~   97 (359)
T 3vhe_A           26 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT------HSEHRALMSELKILIHIGHH-LN-VVNLLGACTK   97 (359)
T ss_dssp             EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC------HHHHHHHHHHHHHHHHHCCC-TT-BCCEEEEECS
T ss_pred             eceeecCCCCceEEEEEeccccccccceEEEEEEecCcCC------HHHHHHHHHHHHHHHhhcCC-cc-eeeeeeeeec
Confidence            567899999999999973     2 34 799997643211      11235677888888887543 33 4455543  3


Q ss_pred             CCC-ceEEEecCCCCchHHHHHHHcC
Q 045250          107 RTM-SLIGMRYLEPPHIILRKGLIAG  131 (165)
Q Consensus       107 ~e~-~~~vMEdl~~~~~~lr~~l~~g  131 (165)
                      .+. ..+|||+++  +.+|.+.+...
T Consensus        98 ~~~~~~iv~e~~~--~g~L~~~l~~~  121 (359)
T 3vhe_A           98 PGGPLMVIVEFCK--FGNLSTYLRSK  121 (359)
T ss_dssp             TTSCCEEEEECCT--TEEHHHHHHTT
T ss_pred             CCCceEEEEEecC--CCcHHHHHHhc
Confidence            333 688999998  44777777654

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=96.15  E-value=0.037  Score=45.38  Aligned_cols=101  Identities=10%  Similarity=0.060  Sum_probs=68.3

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -.+.||.|....||++.+. +| .++||.-....           .....|.++|...... |. +++++.  .|.....
T Consensus        26 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~-----------~~~~~E~~~l~~~~~h-p~-iv~~~~~~~~~~~~~   92 (342)
T 2qr7_A           26 VKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK-----------RDPTEEIEILLRYGQH-PN-IITLKDVYDDGKYVY   92 (342)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT-----------CCCHHHHHHHHHHTTS-TT-BCCEEEEEECSSEEE
T ss_pred             EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc-----------CChHHHHHHHHHhcCC-CC-cCeEEEEEEcCCEEE
Confidence            4578999999999999886 45 79999753211           1234577888776543 33 333433  3556668


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~  151 (165)
                      +|||++.  +..|.+.+.+...+ .    .++.+|...|.-+|..
T Consensus        93 lv~E~~~--gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~  135 (342)
T 2qr7_A           93 VVTELMK--GGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ  135 (342)
T ss_dssp             EEECCCC--SCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEeCCC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999997  34677777665443 2    4777888888888875

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=96.15  E-value=0.045  Score=43.77  Aligned_cols=106  Identities=19%  Similarity=0.114  Sum_probs=71.5

Q ss_pred             eeEeccCCceeEEEEEEeC-----CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC--
Q 045250           36 TIKEVGDGNLNFVYIVVGT-----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR--  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~--  107 (165)
                      -++.||.|....||++...     +| .++||.-.....      +-...+...|.++|+.+..  | ++++++.+-.  
T Consensus        35 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~-~iv~~~~~~~~~  105 (318)
T 3lxp_A           35 KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAG------PQHRSGWKQEIDILRTLYH--E-HIIKYKGCCEDA  105 (318)
T ss_dssp             EEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCC------HHHHHHHHHHHHHHHHCCC--T-TBCCEEEEEEET
T ss_pred             hhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccC------hHHHHHHHHHHHHHHhCCC--c-chhhEEEEEecC
Confidence            5688999999999887532     44 799998653211      1223566788888888762  4 4444554432  


Q ss_pred             --CCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250          108 --TMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 --e~~~~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                        ....+|||+++  ..+|.+.+.......    .++.+|...|+.+|...
T Consensus       106 ~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~~  154 (318)
T 3lxp_A          106 GAASLQLVMEYVP--LGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQH  154 (318)
T ss_dssp             TTTEEEEEECCCT--TCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCceEEEEEeccc--CCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence              33479999997  457888776655432    57788889999999753

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=96.15  E-value=0.033  Score=44.83  Aligned_cols=113  Identities=15%  Similarity=0.067  Sum_probs=69.5

Q ss_pred             Ccc-eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCC
Q 045250           33 DDL-TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH-FDRT  108 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~e  108 (165)
                      .++ .++.||.|....||++... +| .+.+|.|...++.  ....-...+...|+.+|+.+..  |. +++++. +...
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~~~E~~~l~~l~h--~~-iv~~~~~~~~~   89 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE--ATSPKANKEILDEAYVMASVDN--PH-VCRLLGICLTS   89 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHHHHHHHHHHHHHCCB--TT-BCCEEEEEESS
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccc--ccCHHHHHHHHHHHHHHHhCCC--CC-EeEEEEEEecC
Confidence            344 5688999999999999864 33 3433333333321  1223445678889999988753  44 444444 4445


Q ss_pred             CceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250          109 MSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ...++||++.  ...|.+.+....  ..    -.++.+|...|.-+|...
T Consensus        90 ~~~~v~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  137 (327)
T 3poz_A           90 TVQLITQLMP--FGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR  137 (327)
T ss_dssp             SEEEEEECCT--TCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CeEEEEEecC--CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            6679999998  346767766532  22    257888999999999763

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=96.14  E-value=0.029  Score=46.33  Aligned_cols=107  Identities=15%  Similarity=0.114  Sum_probs=72.7

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      -.+.||.|....||++... +| .++||.-...-..     .-..++...|.++|+.+..  | ++++++  +.+.....
T Consensus        33 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----~~~~~~~~~E~~il~~l~h--p-nIv~~~~~~~~~~~~~  104 (362)
T 2bdw_A           33 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-----ARDFQKLEREARICRKLQH--P-NIVRLHDSIQEESFHY  104 (362)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-----HHHHHHHHHHHHHHHHCCC--T-TBCCEEEEEECSSEEE
T ss_pred             EeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCC-----HHHHHHHHHHHHHHHhCCC--C-CCCeEEEEEEeCCEEE
Confidence            4678999999999999876 45 7899975422110     1123566778888887742  4 344444  34556678


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  +..|.+.+.....+     ..++.+|...|+-+|...
T Consensus       105 lv~e~~~--gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~  148 (362)
T 2bdw_A          105 LVFDLVT--GGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG  148 (362)
T ss_dssp             EEECCCC--SCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  34677777665433     257788889999999753

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=96.12  E-value=0.026  Score=44.37  Aligned_cols=108  Identities=11%  Similarity=0.031  Sum_probs=70.8

Q ss_pred             eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~  111 (165)
                      ..+.||.|....||++.+.+ + .+++|.........    ....++...|..+|+.+.   -.++++++.+  +.+...
T Consensus        19 ~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~----~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~~~   91 (294)
T 2rku_A           19 RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK----PHQREKMSMEISIHRSLA---HQHVVGFHGFFEDNDFVF   91 (294)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCS----HHHHHHHHHHHHHHHTCC---CTTBCCEEEEEECSSEEE
T ss_pred             EEEEEeecCCEEEEEEEECCCCceEEEEEechhhccC----HHHHHHHHHHHHHHHhCC---CCCEeeeeeeeccCCEEE
Confidence            56788999999999999874 4 67888754322110    122356667777777663   2344555543  445568


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  ...|.+.+..+...     -.++.+|...|..+|...
T Consensus        92 lv~e~~~--~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  135 (294)
T 2rku_A           92 VVLELCR--RRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR  135 (294)
T ss_dssp             EEEECCT--TCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecCC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  34666666554322     257888899999999753

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=96.12  E-value=0.048  Score=46.99  Aligned_cols=103  Identities=18%  Similarity=0.087  Sum_probs=73.9

Q ss_pred             eEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~  112 (165)
                      .+.||.|..-.||++.... + .|.||.-..-        ....++...|+++|+.+..  | ++.+++.+  +.+...+
T Consensus       225 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~--------~~~~~~~~~E~~~l~~l~h--p-niv~l~~~~~~~~~~~l  293 (495)
T 1opk_A          225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED--------TMEVEEFLKEAAVMKEIKH--P-NLVQLLGVCTREPPFYI  293 (495)
T ss_dssp             EEESGGGTTSSEEEEEEGGGTEEEEEEECCSS--------SSCHHHHHHHHHHHHHCCC--T-TBCCEEEEECSSSSCEE
T ss_pred             eeEecCCCCeEEEEEEEcCCCeEEEEEEecCc--------ccchHHHHHHHHHHHhcCC--C-CEeeEEEEEecCCcEEE
Confidence            5689999999999998864 5 7999986421        1346788899999988742  3 34444443  4567789


Q ss_pred             EEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||+++  +..|.+.|.+..   ..    -.++.+|...|+-+|...
T Consensus       294 v~E~~~--~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~  338 (495)
T 1opk_A          294 ITEFMT--YGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN  338 (495)
T ss_dssp             EEECCT--TCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEccC--CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999998  347878776522   22    256789999999999753

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=96.11  E-value=0.024  Score=45.21  Aligned_cols=111  Identities=17%  Similarity=0.125  Sum_probs=73.9

Q ss_pred             Ccc-eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC
Q 045250           33 DDL-TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DR  107 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~  107 (165)
                      +.+ -.+.+|.|....||++.+. ++ .++||.-.......    +...++...|...|+.+..  | ++++++.+  +.
T Consensus        34 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----~~~~~~~~~e~~~l~~l~h--p-~iv~~~~~~~~~  106 (309)
T 2h34_A           34 GPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSD----PVFRTRMQREARTAGRLQE--P-HVVPIHDFGEID  106 (309)
T ss_dssp             CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGS----HHHHHHHHHHHHHHTTCCC--T-TBCCEEEEEEET
T ss_pred             ccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccC----HHHHHHHHHHHHHHhhcCC--C-CeeEEEEEEeeC
Confidence            344 5678899999999999986 45 79999865433210    1223566677777766632  3 34445443  45


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCC-CC----HHHHHHHHHHHHHHHhcc
Q 045250          108 TMSLIGMRYLEPPHIILRKGLIAGI-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 e~~~~vMEdl~~~~~~lr~~l~~g~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ....+|||+++  +..|.+.+.... ..    -.++.+|...|.-+|...
T Consensus       107 ~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  154 (309)
T 2h34_A          107 GQLYVDMRLIN--GVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAG  154 (309)
T ss_dssp             TEEEEEEECCC--CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CeEEEEEEecC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCc
Confidence            66789999998  457777776543 22    257888888999999753

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=96.09  E-value=0.06  Score=43.59  Aligned_cols=106  Identities=14%  Similarity=0.060  Sum_probs=73.1

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccC--CCCCceEEE--EcCCC
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLC--PDHVPEVYH--FDRTM  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~--p~~vP~v~~--~D~e~  109 (165)
                      -++.||.|....||++.+. +| .++||.-...-        ....+...|.++|+.+....  -.++++++.  .+.+.
T Consensus        39 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~  110 (360)
T 3llt_A           39 VIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK--------KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDH  110 (360)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH--------HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTE
T ss_pred             EEEEEcccCCeEEEEEEECCCCeEEEEEEeccch--------hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCe
Confidence            5788999999999999985 44 79999764211        22356777999998886421  123445443  45577


Q ss_pred             ceEEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ..+|||+++.   .|.+.+....   ..    -.++.+|...|+-+|...
T Consensus       111 ~~lv~e~~~~---~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  157 (360)
T 3llt_A          111 MCLIFEPLGP---SLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS  157 (360)
T ss_dssp             EEEEECCCCC---BHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEEEcCCCC---CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8899999962   5666666543   22    247788899999999754

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=96.07  E-value=0.032  Score=44.92  Aligned_cols=111  Identities=15%  Similarity=0.117  Sum_probs=71.2

Q ss_pred             eeEeccCCceeEEEEEEeCCCeEEEEecCccccc-cCCCCCCChHHHHHHHHHHHHhhccC-------CCCCceEE----
Q 045250           36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRC-IGESWPMTKERAYFEALALKEHGKLC-------PDHVPEVY----  103 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~-~~~~~~l~~~R~~~E~~~L~~~~~~~-------p~~vP~v~----  103 (165)
                      -++.||.|..-.||++.+.+..++||.-...... ....-.-..++...|.++|+.+..+.       |. +..++    
T Consensus        24 ~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~n-iv~l~~~~~  102 (336)
T 2vuw_A           24 RCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEG-FIGLNSVHC  102 (336)
T ss_dssp             TCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCC-BCCEEEEEE
T ss_pred             heeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCc-hhhhcceeE
Confidence            3578999999999999984338999987543211 00112344578899999999887421       21 11111    


Q ss_pred             ----------------------------EEcCCCceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHH
Q 045250          104 ----------------------------HFDRTMSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTL  149 (165)
Q Consensus       104 ----------------------------~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h  149 (165)
                                                  .++.....+|||++. .+..+ +.+.++...    -.++.+|...|.-+|
T Consensus       103 ~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~-~g~ll-~~~~~~~~~~~~~~~i~~qi~~aL~~lH  178 (336)
T 2vuw_A          103 VQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEF-GGIDL-EQMRTKLSSLATAKSILHQLTASLAVAE  178 (336)
T ss_dssp             EESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEEC-CCEET-GGGTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecC-CCccH-HHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence                                        124788899999986 33333 333344332    257888889999999

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=96.07  E-value=0.061  Score=43.92  Aligned_cols=105  Identities=14%  Similarity=0.080  Sum_probs=72.4

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC------
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR------  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~------  107 (165)
                      -++.||.|....||++.+. ++ .++||.-.+.-      ..-...+...|.++|+.+..  |. +++++.+-.      
T Consensus        31 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~E~~~l~~l~h--~n-iv~~~~~~~~~~~~~  101 (364)
T 3qyz_A           31 NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE------HQTYCQRTLREIKILLRFRH--EN-IIGINDIIRAPTIEQ  101 (364)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT------CHHHHHHHHHHHHHHHHCCC--TT-BCCCCEEECCSSTTT
T ss_pred             EEEEeecCCCeEEEEEEECCCCeEEEEEEecccc------CcHHHHHHHHHHHHHHhcCC--CC-CccceeEEecCCccc
Confidence            5678999999999999876 45 79999765322      11233677789988887742  33 334443321      


Q ss_pred             -CCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250          108 -TMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 -e~~~~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                       ....+|||+++  . .|.+.+..+....    .++.+|...|+-+|...
T Consensus       102 ~~~~~iv~e~~~--~-~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~~  148 (364)
T 3qyz_A          102 MKDVYIVQDLME--T-DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN  148 (364)
T ss_dssp             CCCEEEEEECCS--E-EHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cceEEEEEcccC--c-CHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             24689999998  3 6777776665543    47788889999999763

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=96.06  E-value=0.022  Score=47.24  Aligned_cols=104  Identities=15%  Similarity=0.115  Sum_probs=65.5

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~  112 (165)
                      .+.||.|..-.||++.+. +| .++||.-...-.       -..++...|.++|+.+.   -.++++++.  .+.+...+
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~---hpnIv~~~~~~~~~~~~~l  163 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM-------KDKEEVKNEISVMNQLD---HANLIQLYDAFESKNDIVL  163 (373)
T ss_dssp             EEECC-----CEEEEEETTTCCEEEEEEEECCSH-------HHHHHHHHHHHHHTTCC---CTTBCCEEEEEECSSEEEE
T ss_pred             ceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc-------ccHHHHHHHHHHHHhCC---CCCCCeEEEEEEECCEEEE
Confidence            456999999999999875 45 799997543211       12356777888887663   234455544  35566799


Q ss_pred             EEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||+++  ...|.+.+.+..  ..    -.++.+|...|+-+|...
T Consensus       164 v~E~~~--~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  207 (373)
T 2x4f_A          164 VMEYVD--GGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY  207 (373)
T ss_dssp             EEECCT--TCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEeCCC--CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999997  346666665432  22    246778999999999753

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=96.05  E-value=0.013  Score=47.11  Aligned_cols=86  Identities=19%  Similarity=0.165  Sum_probs=56.6

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~  111 (165)
                      -.+.||.|....||++.+. ++ .++||.-......  ..-+-..++...|.++|+.+.  .| ++++++.+  +.....
T Consensus        30 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~~~E~~~l~~l~--hp-niv~~~~~~~~~~~~~  104 (345)
T 3hko_A           30 LKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIR--QINPKDVERIKTEVRLMKKLH--HP-NIARLYEVYEDEQYIC  104 (345)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH--C---CHHHHHHHHHHHHHHCC--CT-TBCCEEEEEECSSEEE
T ss_pred             ecceeeecCCeEEEEEEECCCCceEEEeehhhhhhc--ccCHHHHHHHHHHHHHHHhCC--CC-CcceeehhhccCCeEE
Confidence            4678999999999999886 44 7888975533210  001234567888999998885  24 34445443  455568


Q ss_pred             EEEecCCCCchHHHHHH
Q 045250          112 IGMRYLEPPHIILRKGL  128 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l  128 (165)
                      +|||+++  +..|.+.+
T Consensus       105 lv~e~~~--gg~L~~~l  119 (345)
T 3hko_A          105 LVMELCH--GGHLLDKL  119 (345)
T ss_dssp             EEEECCC--SCBHHHHE
T ss_pred             EEEeCCC--CCcHHHHH
Confidence            9999997  34676655

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=96.05  E-value=0.036  Score=44.64  Aligned_cols=106  Identities=17%  Similarity=0.087  Sum_probs=70.0

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -++.||.|....||++.+. +| .++||.-.....     -.-...+...|.++|+.+..  | ++.+++.  .+.....
T Consensus        38 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--~-~iv~~~~~~~~~~~~~  109 (329)
T 3gbz_A           38 RITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE-----EEGVPGTAIREVSLLKELQH--R-NIIELKSVIHHNHRLH  109 (329)
T ss_dssp             EEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC-------------CHHHHHHGGGCCC--T-TBCCEEEEEEETTEEE
T ss_pred             EEEEEEecCCeEEEEEEECCCCceEEEEEEccccc-----ccccchhHHHHHHHHHHcCC--C-CcceEEEEEecCCEEE
Confidence            5678999999999999876 45 899997643221     11223455678888877642  3 3444443  3566778


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  . .|.+.+......     -.++.+|...|.-+|...
T Consensus       110 lv~e~~~--~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~  152 (329)
T 3gbz_A          110 LIFEYAE--N-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRR  152 (329)
T ss_dssp             EEEECCS--E-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecCC--C-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999998  3 677777665433     256788889999999753

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=96.05  E-value=0.03  Score=46.35  Aligned_cols=106  Identities=15%  Similarity=-0.045  Sum_probs=71.1

Q ss_pred             eeEeccCCceeEEEEEEeC----CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC
Q 045250           36 TIKEVGDGNLNFVYIVVGT----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRT  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e  108 (165)
                      -.+.||.|....||++...    ++ .++||.-..-..      .-...+...|+.+|+.+.   -.++++++.+  +..
T Consensus        49 ~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~  119 (373)
T 2qol_A           49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT------EKQRRDFLGEASIMGQFD---HPNIIRLEGVVTKSK  119 (373)
T ss_dssp             CCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCC------HHHHHHHHHHHHHHTTCC---CTTBCCEEEEECSSS
T ss_pred             eeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccC------HHHHHHHHHHHHHHHhCC---CCCCCeEEEEEeeCC
Confidence            3578999999999999864    34 799998753211      112345667877776663   2345566655  345


Q ss_pred             CceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250          109 MSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ...+|||+++  ...|.+.+.+..  ..    -.++.+|...|+-+|...
T Consensus       120 ~~~lv~e~~~--~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  167 (373)
T 2qol_A          120 PVMIVTEYME--NGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG  167 (373)
T ss_dssp             SCEEEEECCT--TCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ceEEEEeCCC--CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            5689999997  347888776542  22    257888999999999753

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=96.04  E-value=0.028  Score=45.30  Aligned_cols=106  Identities=14%  Similarity=0.087  Sum_probs=72.0

Q ss_pred             EeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEE
Q 045250           38 KEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLIG  113 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~v  113 (165)
                      +.||.|....||++.+. +| .++||.-......     .-...+...|..+|+.+... | .+++++.+  +.....+|
T Consensus        35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~e~~~l~~l~~~-~-~iv~~~~~~~~~~~~~lv  107 (327)
T 3lm5_A           35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRG-----QDCRAEILHEIAVLELAKSC-P-RVINLHEVYENTSEIILI  107 (327)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEESEETT-----EECHHHHHHHHHHHHHTTTC-T-TBCCEEEEEECSSEEEEE
T ss_pred             ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcc-----hHHHHHHHHHHHHHHhccCC-C-CEEEEEEEEEeCCeEEEE
Confidence            78999999999999886 45 8999975533221     12346778888888877653 3 34445443  55667899


Q ss_pred             EecCCCCchHHHHHHHcC--C-CC----HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIAG--I-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g--~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||++.  ...|.+.+...  . ..    -.++.+|...|+.+|...
T Consensus       108 ~e~~~--~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g  151 (327)
T 3lm5_A          108 LEYAA--GGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN  151 (327)
T ss_dssp             EECCT--TEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEecC--CCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99998  34666655432  2 22    257888899999999753

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=96.00  E-value=0.019  Score=46.40  Aligned_cols=106  Identities=12%  Similarity=0.030  Sum_probs=69.7

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--CCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD--RTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--~e~~~  111 (165)
                      -++.||.|....||++.+. +| .++||.-...-.      .-..++...|..+|+.+..  | ++++++.+.  .....
T Consensus        11 i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~h--p-nIv~~~~~~~~~~~~~   81 (323)
T 3tki_A           11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA------VDCPENIKKEICINKMLNH--E-NVVKFYGHRREGNIQY   81 (323)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------------CHHHHHHHHHHCCC--T-TBCCEEEEEECSSEEE
T ss_pred             eeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc------cchHHHHHHHHHHHHhCCC--C-CCCeEEEEEecCCeEE
Confidence            5678999999999999876 45 799997532211      1122566778888887642  3 445555543  34456


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  ...|.+.+..+..+     -.++.+|...|.-+|...
T Consensus        82 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~g  125 (323)
T 3tki_A           82 LFLEYCS--GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG  125 (323)
T ss_dssp             EEEECCT--TEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEcCC--CCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999997  34666666554322     257888889999999754

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=95.97  E-value=0.016  Score=47.86  Aligned_cols=105  Identities=13%  Similarity=-0.007  Sum_probs=71.0

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~  112 (165)
                      .+.||.|....||++... +| .|+||...+....      -...+...|+++|+.+.   -.++++++.+  +.+...+
T Consensus       119 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~E~~~l~~l~---hpniv~~~~~~~~~~~~~l  189 (377)
T 3cbl_A          119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPP------DLKAKFLQEARILKQYS---HPNIVRLIGVCTQKQPIYI  189 (377)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCH------HHHTTTTHHHHHHTTCC---CTTBCCEEEEECSSSSCEE
T ss_pred             eeEeccCCCCeEEEEEEecCCeEEEEEEccccCCH------HHHHHHHHHHHHHHhCC---CCCEEEEEEEEecCCCcEE
Confidence            578999999999999986 45 7999986543210      11235567888887663   2345555554  4456789


Q ss_pred             EEecCCCCchHHHHHHHcC-C-CC----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAG-I-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g-~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||+++  ...|.+.+... . ..    -.++.+|...|+-+|...
T Consensus       190 v~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  233 (377)
T 3cbl_A          190 VMELVQ--GGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC  233 (377)
T ss_dssp             EEECCT--TCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEcCC--CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999997  33666666542 1 22    257888899999999753

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=95.97  E-value=0.054  Score=43.09  Aligned_cols=108  Identities=15%  Similarity=0.019  Sum_probs=68.7

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--CCCc-
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD--RTMS-  110 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--~e~~-  110 (165)
                      -.+.||.|..-.||++.+. +| .++||.-......    -+-...+...|.+.|+.+   --.++++++.+-  .... 
T Consensus        16 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~E~~~l~~l---~hp~iv~~~~~~~~~~~~~   88 (311)
T 3ork_A           16 LGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLAR----DPSFYLRFRREAQNAAAL---NHPAIVAVYDTGEAETPAG   88 (311)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTT----SHHHHHHHHHHHTTCCCC---CCTTBCCEEEEEEEEETTE
T ss_pred             EEEEEccCCCEEEEEEEECCCCceEEEEEeCccccC----CHHHHHHHHHHHHHHHcC---CCCCcceEEEeeeccCCCC
Confidence            5678999999999999975 45 8999976432211    001123445555554433   234566666543  2333 


Q ss_pred             ---eEEEecCCCCchHHHHHHHcCC-CC----HHHHHHHHHHHHHHHhcc
Q 045250          111 ---LIGMRYLEPPHIILRKGLIAGI-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ---~~vMEdl~~~~~~lr~~l~~g~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                         .+|||+++  +..|++.+.... ..    -.++.+|...|+-+|...
T Consensus        89 ~~~~lv~e~~~--g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  136 (311)
T 3ork_A           89 PLPYIVMEYVD--GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG  136 (311)
T ss_dssp             EEEEEEEECCC--EEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccEEEEecCC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence               89999997  457877776543 22    257788888899999753

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=95.94  E-value=0.026  Score=43.63  Aligned_cols=106  Identities=12%  Similarity=0.044  Sum_probs=70.7

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~  111 (165)
                      -++.+|.|....||++.+. +| .++||.-...-.      .-..++...|...|+.+.   -.++++++.+  +.....
T Consensus        11 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~   81 (276)
T 2yex_A           11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA------VDCPENIKKEICINKMLN---HENVVKFYGHRREGNIQY   81 (276)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC------TTHHHHHHHHHHHHHTCC---CTTBCCEEEEEEETTEEE
T ss_pred             EEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc------hhhhHHHHHHHHHHHhcC---CCCceeeeeEEEcCCEEE
Confidence            4567899999999999886 45 899997543221      123466777888887663   2345555544  345567


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  ...|.+.+..+...     -.++.+|...|..+|...
T Consensus        82 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  125 (276)
T 2yex_A           82 LFLEYCS--GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG  125 (276)
T ss_dssp             EEEECCT--TEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEecC--CCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999997  34666666544322     257888889999998653

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=95.92  E-value=0.058  Score=43.51  Aligned_cols=106  Identities=13%  Similarity=-0.017  Sum_probs=70.2

Q ss_pred             eeEeccCCceeEEEEEEeC-C---C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC
Q 045250           36 TIKEVGDGNLNFVYIVVGT-S---G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRT  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~---g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e  108 (165)
                      -.+.||.|....||++.+. +   + .++||.-..-..      .-...+...|+++|+.+.   -.++++++.+  +..
T Consensus        53 i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~  123 (325)
T 3kul_A           53 IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT------ERQRRDFLSEASIMGQFD---HPNIIRLEGVVTRGR  123 (325)
T ss_dssp             EEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCC------HHHHHHHHHHHHHHTTCC---CTTBCCEEEEECGGG
T ss_pred             EeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCC------HHHHHHHHHHHHHHHhCC---CCCCCcEEEEEEeCC
Confidence            3577999999999999875 2   2 489997653211      112345677888887664   2344555543  445


Q ss_pred             CceEEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 045250          109 MSLIGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ...+|||+++  +.+|.+.+...  ...    -.++.+|...|.-+|...
T Consensus       124 ~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~  171 (325)
T 3kul_A          124 LAMIVTEYME--NGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLG  171 (325)
T ss_dssp             CCEEEEECCT--TCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccEEEeeCCC--CCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            6789999997  35787777543  222    257788888999999753

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=95.91  E-value=0.052  Score=42.02  Aligned_cols=101  Identities=19%  Similarity=0.174  Sum_probs=69.0

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE------c-
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF------D-  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~------D-  106 (165)
                      .++.+|.|....||++.+. +| .++||.....           .++...|.++|+.+..  |. +.+++.+      + 
T Consensus        15 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----------~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~~~~~~   80 (284)
T 2a19_B           15 EIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN-----------NEKAEREVKALAKLDH--VN-IVHYNGCWDGFDYDP   80 (284)
T ss_dssp             EEEEEECSSSCCEEEEEETTTCCEEEEEEEECC-----------SGGGHHHHHHHHHCCC--TT-BCCEEEEEEEEEEC-
T ss_pred             eeeeeccCCceEEEEEEEcCCCeEEEEEEeccc-----------cHHHHHHHHHHHhCCC--CC-EEEEeeeEeccccCc
Confidence            5678999999999999986 45 8999975321           1466788888887742  33 3333332      1 


Q ss_pred             -----------CCCceEEEecCCCCchHHHHHHHcC---CCCH----HHHHHHHHHHHHHHhcc
Q 045250          107 -----------RTMSLIGMRYLEPPHIILRKGLIAG---IKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 -----------~e~~~~vMEdl~~~~~~lr~~l~~g---~~~~----~~a~~iG~~La~~h~~t  152 (165)
                                 .....+|||+++  ..+|.+.+.+.   ....    .++.+|...|.-+|...
T Consensus        81 ~~~~~~~~~~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  142 (284)
T 2a19_B           81 ETSSKNSSRSKTKCLFIQMEFCD--KGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK  142 (284)
T ss_dssp             --------CCEEEEEEEEECCCC--SCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccccccccccCcceEEEEEeccC--CCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence                       233679999998  45777777542   2222    57788888999999753

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=95.90  E-value=0.04  Score=44.04  Aligned_cols=107  Identities=15%  Similarity=0.016  Sum_probs=71.7

Q ss_pred             eeEeccCCceeEEEEEEeCC-C------eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--Ec
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G------SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FD  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g------svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D  106 (165)
                      -.+.||.|....||++.... +      .++||.......      .-..++...|.++|+.+... | ++++++.  .+
T Consensus        50 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~~h-~-~iv~~~~~~~~  121 (333)
T 2i1m_A           50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH------ADEKEALMSELKIMSHLGQH-E-NIVNLLGACTH  121 (333)
T ss_dssp             EEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCC------HHHHHHHHHHHHHHHHHCCC-T-TBCCEEEEECS
T ss_pred             eeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccC------hHHHHHHHHHHHHHHhhcCC-C-CeeeEEEEEec
Confidence            45789999999999998742 1      588887654321      11235677888889887543 3 3445554  35


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcC---------------CCC----HHHHHHHHHHHHHHHhcc
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLIAG---------------IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~~g---------------~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .....+|||+++  ..+|.+.+...               ...    -.++.+|...|+-+|...
T Consensus       122 ~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  184 (333)
T 2i1m_A          122 GGPVLVITEYCC--YGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN  184 (333)
T ss_dssp             SSSCEEEEECCT--TEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCceEEEEecCC--CCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC
Confidence            567889999997  34676666532               111    257788999999999753

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=95.90  E-value=0.054  Score=44.58  Aligned_cols=111  Identities=8%  Similarity=-0.042  Sum_probs=74.3

Q ss_pred             CCcc-eeEeccCC--ceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--E
Q 045250           32 FDDL-TIKEVGDG--NLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--H  104 (165)
Q Consensus        32 ~~~~-~v~~l~~G--n~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~  104 (165)
                      .+.. -++.||.|  ....||++.+. +| .|+||.-......     .-...+...|.++|+.+..  |..+ +++  +
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~E~~~l~~l~h--~niv-~~~~~~   95 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACS-----NEMVTFLQGELHVSKLFNH--PNIV-PYRATF   95 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSC-----HHHHHHHHHHHHHHHHCCC--TTBC-CEEEEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccC-----hHHHHHHHHHHHHHHhCCC--CCCC-cEeEEE
Confidence            3445 67789999  88889999986 45 7999976432210     1123566678888888752  4433 333  3


Q ss_pred             EcCCCceEEEecCCCCchHHHHHHHcC---CCC----HHHHHHHHHHHHHHHhcc
Q 045250          105 FDRTMSLIGMRYLEPPHIILRKGLIAG---IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       105 ~D~e~~~~vMEdl~~~~~~lr~~l~~g---~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .+.....+|||+++  +..|.+.+...   ...    ..++.+|...|+-+|...
T Consensus        96 ~~~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  148 (389)
T 3gni_B           96 IADNELWVVTSFMA--YGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG  148 (389)
T ss_dssp             EETTEEEEEEECCT--TCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EECCEEEEEEEccC--CCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            46667789999998  45777777653   222    257778888999999754

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=95.87  E-value=0.055  Score=45.87  Aligned_cols=109  Identities=13%  Similarity=0.027  Sum_probs=72.8

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH-FDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~e~~~~  112 (165)
                      -++.||.|..--||++... +| .+.||.-....... .   -...+...|..+|+.+..  |..+.-... .|.....+
T Consensus        73 ~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~-~---~~~~~~~~E~~il~~l~h--p~Iv~l~~~~~~~~~~~l  146 (410)
T 3v8s_A           73 VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIK-R---SDSAFFWEERDIMAFANS--PWVVQLFYAFQDDRYLYM  146 (410)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH-T---CCCSTHHHHHHHHHHCCC--TTBCCEEEEEECSSEEEE
T ss_pred             EEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhh-h---HHHHHHHHHHHHHHhCCC--CCCCeEEEEEEECCEEEE
Confidence            5678999999999999986 35 78888754322111 1   123456778888877642  444433333 35556679


Q ss_pred             EEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      ||||++  +..|.+.+..+....    .++.+|...|.-+|...
T Consensus       147 V~E~~~--gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~g  188 (410)
T 3v8s_A          147 VMEYMP--GGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMG  188 (410)
T ss_dssp             EECCCT--TEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEeCCC--CCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999997  357777776665443    46778888899999764

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=95.86  E-value=0.051  Score=43.52  Aligned_cols=105  Identities=14%  Similarity=0.110  Sum_probs=61.8

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~  111 (165)
                      .++.||.|....||++.+. +| .++||.-....      -.-..++...|.++|+.+..  |. +++++.+  +.+...
T Consensus         9 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~E~~~l~~l~h--p~-iv~~~~~~~~~~~~~   79 (317)
T 2pmi_A            9 QLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS------EEGTPSTAIREISLMKELKH--EN-IVRLYDVIHTENKLT   79 (317)
T ss_dssp             ----------CEEEEEECSSSCCEEEEEEEECCS------TTCSCHHHHHHHHHHTTCCB--TT-BCCEEEEECCTTEEE
T ss_pred             EeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc------ccccHHHHHHHHHHHHhcCC--CC-cceEEEEEEECCeEE
Confidence            4677999999999999876 45 79999753221      12334677889988877742  43 4444443  445678


Q ss_pred             EEEecCCCCchHHHHHHHcC-------CCCH----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAG-------IKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g-------~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++ .  .|.+.+...       ....    .++.+|...|.-+|...
T Consensus        80 lv~e~~~-~--~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~  128 (317)
T 2pmi_A           80 LVFEFMD-N--DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK  128 (317)
T ss_dssp             EEEECCC-C--BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEecC-C--CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998 3  566655442       1222    45668899999999753

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=95.83  E-value=0.048  Score=43.38  Aligned_cols=103  Identities=14%  Similarity=0.007  Sum_probs=70.0

Q ss_pred             eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC------CC
Q 045250           36 TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR------TM  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~------e~  109 (165)
                      -++.||.|....||++...+..++||.-..          -...+...|.+++....--.| ++.+++.+..      ..
T Consensus        41 ~~~~lg~G~~g~V~~~~~~~~~vavK~~~~----------~~~~~~~~e~~~~~~~~~~h~-~i~~~~~~~~~~~~~~~~  109 (337)
T 3mdy_A           41 MVKQIGKGRYGEVWMGKWRGEKVAVKVFFT----------TEEASWFRETEIYQTVLMRHE-NILGFIAADIKGTGSWTQ  109 (337)
T ss_dssp             EEEEEEEETTEEEEEEEETTEEEEEEEEEG----------GGHHHHHHHHHHHTSTTCCCT-TBCCEEEEEEESCGGGCE
T ss_pred             EEeEeecCCCeEEEEEEECCceEEEEEEec----------cccchhhhHHHHHHHHhhcCC-CeeeEEEEEccCCCCCCc
Confidence            578899999999999998744899997421          122455667666655432223 3445554433      34


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~  151 (165)
                      ..+|||+++  +.+|++.+..+....    .++.++...|+-+|..
T Consensus       110 ~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~  153 (337)
T 3mdy_A          110 LYLITDYHE--NGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTE  153 (337)
T ss_dssp             EEEEECCCT--TCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSC
T ss_pred             eEEEEeccC--CCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            679999998  457888887665433    5778888999999975

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=95.82  E-value=0.0038  Score=51.55  Aligned_cols=109  Identities=12%  Similarity=-0.030  Sum_probs=69.4

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccC-CCCCc--------eEEEE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLC-PDHVP--------EVYHF  105 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~-p~~vP--------~v~~~  105 (165)
                      .+.||.|..-.||++.+. +| .++||.-......    -.-..++...|+++|+.+..+- |..+.        .=++.
T Consensus        78 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~  153 (377)
T 3byv_A           78 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERP----PSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK  153 (377)
T ss_dssp             EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-C----CTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEE
T ss_pred             cceeecCCCEEEEEEEECCCCcEEEEEEEeecccc----chHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhh
Confidence            688999999999999974 45 8999986533221    1123467778887777776542 22111        11222


Q ss_pred             cCC-----------------CceEEEecCCCCchHHHHHHHcCCCC------------HHHHHHHHHHHHHHHhcc
Q 045250          106 DRT-----------------MSLIGMRYLEPPHIILRKGLIAGIKY------------PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~e-----------------~~~~vMEdl~~~~~~lr~~l~~g~~~------------~~~a~~iG~~La~~h~~t  152 (165)
                      ++.                 +..+|||+++  + +|.+.+.+...+            -.++.+|...|+-+|...
T Consensus       154 ~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~--g-~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  226 (377)
T 3byv_A          154 DPQKKKMIRVRLDERDMWVLSRFFLYPRMQ--S-NLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG  226 (377)
T ss_dssp             CTTSCSEEEC------CEEESEEEEEECCS--E-EHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccCCccccccccCCCceEEEEEEEEEeccC--C-CHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC
Confidence            221                 3679999996  3 677776642211            247889999999999864

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=95.81  E-value=0.038  Score=47.85  Aligned_cols=107  Identities=14%  Similarity=0.035  Sum_probs=74.1

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~  111 (165)
                      -.+.||.|....||++... +| .++||.-....... .   -..++...|..+|+.+..  | ++.+++.+  ++....
T Consensus        20 l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~-~---~~~~~~~~Ei~~l~~l~H--p-nIv~l~~~~~~~~~~~   92 (476)
T 2y94_A           20 LGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRS-L---DVVGKIRREIQNLKLFRH--P-HIIKLYQVISTPSDIF   92 (476)
T ss_dssp             EEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHH-T---TTHHHHHHHHHHHTTCCC--T-TBCCEEEEEECSSEEE
T ss_pred             EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccC-H---HHHHHHHHHHHHHHhCCC--C-CCCcEEEEEEECCEEE
Confidence            4678999999999999876 56 89999865432111 1   234677888888876642  3 44555543  566778


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~  151 (165)
                      +|||+++  +..|.+.+.++... .    .++.+|...|.-+|..
T Consensus        93 lv~E~~~--gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~  135 (476)
T 2y94_A           93 MVMEYVS--GGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH  135 (476)
T ss_dssp             EEEECCS--SEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeCCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999997  35787777654432 2    4777888888889865

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=95.81  E-value=0.13  Score=41.39  Aligned_cols=106  Identities=13%  Similarity=0.031  Sum_probs=71.0

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-------
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD-------  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-------  106 (165)
                      -++.||.|....||++.+. +| .++||.-.....     ..-...+...|.++|+.+..  | ++++++.+-       
T Consensus        21 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--~-~iv~~~~~~~~~~~~~   92 (351)
T 3mi9_A           21 KLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-----KEGFPITALREIKILQLLKH--E-NVVNLIEICRTKASPY   92 (351)
T ss_dssp             EEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSC-----SSSSCHHHHHHHHHHHHCCC--T-TBCCEEEEEEEC----
T ss_pred             EEEEEecCCCcEEEEEEECCCCCEEEEEEEecccc-----cccchHHHHHHHHHHHhccC--C-CcccHhheeecccccc
Confidence            5688999999999999985 55 899997643321     12234567789999988752  3 344444332       


Q ss_pred             ---CCCceEEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 045250          107 ---RTMSLIGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ---~e~~~~vMEdl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t  152 (165)
                         .....+|||+++  + .+.+.+...  ...    -.++.+|...|+-+|...
T Consensus        93 ~~~~~~~~lv~e~~~--~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~  144 (351)
T 3mi9_A           93 NRCKGSIYLVFDFCE--H-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK  144 (351)
T ss_dssp             ----CEEEEEEECCS--E-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccCCceEEEEEeccC--C-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence               224579999998  3 556666553  222    257888889999999653

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=95.79  E-value=0.029  Score=44.15  Aligned_cols=107  Identities=11%  Similarity=-0.039  Sum_probs=68.6

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE----cCCCc
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF----DRTMS  110 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~----D~e~~  110 (165)
                      .+.+|.|....||++.+. ++ .++||.-......   ..+-...+...|..+|+.+.  .| ++.+++.+    +....
T Consensus        10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~---~~~~~~~~~~~E~~~l~~l~--h~-~i~~~~~~~~~~~~~~~   83 (305)
T 2wtk_C           10 GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLR---RIPNGEANVKKEIQLLRRLR--HK-NVIQLVDVLYNEEKQKM   83 (305)
T ss_dssp             CCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHH---HSTTHHHHHHHHHHHHTTCC--CT-TBCCEEEEEECC---CE
T ss_pred             eeEEecCCCeEEEEEEECCCCcEEEEEEecccccc---ccchhHHHHHHHHHHHHhcC--CC-CeeEEEEEEEcCCCCeE
Confidence            467899999999999986 45 7999987644311   11233467778888887764  23 44455543    23466


Q ss_pred             eEEEecCCCCchHHHHHHHc---CCCC----HHHHHHHHHHHHHHHhcc
Q 045250          111 LIGMRYLEPPHIILRKGLIA---GIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdl~~~~~~lr~~l~~---g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .+|||+++ ..  +.+.+..   +...    -.++.+|...|..+|...
T Consensus        84 ~lv~e~~~-~~--l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~  129 (305)
T 2wtk_C           84 YMVMEYCV-CG--MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG  129 (305)
T ss_dssp             EEEEECCS-EE--HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEehhcc-CC--HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence            89999998 33  4454443   2222    247778899999999763

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=95.78  E-value=0.11  Score=41.45  Aligned_cols=105  Identities=12%  Similarity=-0.052  Sum_probs=69.9

Q ss_pred             eeEeccCCceeEEEEEEeC-C-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCC---CCCceEE--EEcC
Q 045250           36 TIKEVGDGNLNFVYIVVGT-S-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCP---DHVPEVY--HFDR  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p---~~vP~v~--~~D~  107 (165)
                      -++.||.|....||++.+. + + .++||.-..--        ...++...|.++|+.+.....   ..+..++  +.+.
T Consensus        23 ~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~   94 (355)
T 2eu9_A           23 IVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG--------KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH   94 (355)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH--------HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEET
T ss_pred             EEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc--------cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeC
Confidence            5778999999999999875 3 3 68899864221        123567789999988876422   1233333  3445


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhc
Q 045250          108 TMSLIGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       108 e~~~~vMEdl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~  151 (165)
                      ....+|||+++  . .+.+.+....   ..    -.++.+|...|+-+|..
T Consensus        95 ~~~~lv~e~~~--~-~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~  142 (355)
T 2eu9_A           95 GHMCIAFELLG--K-NTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN  142 (355)
T ss_dssp             TEEEEEEECCC--C-BHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CeEEEEEeccC--C-ChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            67789999997  2 3334444432   22    25788889999999975

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=95.78  E-value=0.019  Score=48.04  Aligned_cols=98  Identities=17%  Similarity=0.056  Sum_probs=65.4

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~  112 (165)
                      .+.||.|..--||++.+. +| .|.||.-.    .  ...      ...|..+|+.+.-  |. +.++|.  .|.....+
T Consensus        63 ~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~----~--~~~------~~~E~~il~~l~H--pn-IV~l~~~~~~~~~~~i  127 (336)
T 4g3f_A           63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVR----L--EVF------RVEELVACAGLSS--PR-IVPLYGAVREGPWVNI  127 (336)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEE----T--TTC------CTHHHHTTTTCCC--TT-BCCEEEEEEETTEEEE
T ss_pred             CcEeccCCCeEEEEEEECCCCCEEEEEEEC----H--HHh------HHHHHHHHHhCCC--CC-CCcEEEEEEECCEEEE
Confidence            345999999999999875 46 78899743    1  111      1248777765532  44 344443  35556679


Q ss_pred             EEecCCCCchHHHHHHHcCC-CCH----HHHHHHHHHHHHHHhc
Q 045250          113 GMRYLEPPHIILRKGLIAGI-KYP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~-~~~----~~a~~iG~~La~~h~~  151 (165)
                      ||||++  +..|.+.|.+.. ...    .++.+|...|.-+|..
T Consensus       128 vmEy~~--gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~  169 (336)
T 4g3f_A          128 FMELLE--GGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR  169 (336)
T ss_dssp             EECCCT--TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEeccC--CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999998  457888776643 332    4677888889999865

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=95.76  E-value=0.044  Score=42.66  Aligned_cols=109  Identities=17%  Similarity=-0.002  Sum_probs=64.7

Q ss_pred             eeEeccCCceeEEEEEEeC--CC---eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCc
Q 045250           36 TIKEVGDGNLNFVYIVVGT--SG---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMS  110 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~--~g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~  110 (165)
                      -++.||.|....||++...  ++   .++||.-.+.....    .-..++...|.++|+.+.  .|..++-.-.+..+..
T Consensus        22 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~   95 (291)
T 1u46_A           22 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQ----PEAMDDFIREVNAMHSLD--HRNLIRLYGVVLTPPM   95 (291)
T ss_dssp             EEEECC----CCCEEEEEECTTSCEEEEEEEC------------CHHHHHHHHHHHHHHHCC--CTTBCCEEEEECSSSC
T ss_pred             eeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCC----HHHHHHHHHHHHHHHhCC--CCCcccEEEEEccCCc
Confidence            5678999999999999743  23   48889866443210    123456778888888774  2444444444445567


Q ss_pred             eEEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 045250          111 LIGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .+|||+++  ...|.+.+...  ...    -.++.+|...|..+|...
T Consensus        96 ~~v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  141 (291)
T 1u46_A           96 KMVTELAP--LGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR  141 (291)
T ss_dssp             EEEEECCT--TCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eeeEeccc--CCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence            89999998  34666666542  222    257788899999999763

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=95.74  E-value=0.065  Score=43.27  Aligned_cols=105  Identities=16%  Similarity=0.038  Sum_probs=68.8

Q ss_pred             eEeccCCceeEEEEEEeCC--C----eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC
Q 045250           37 IKEVGDGNLNFVYIVVGTS--G----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRT  108 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~--g----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e  108 (165)
                      .+.||.|....||++....  +    .++||.-.....      .-...+...|.++|+.+.   -.++++++.+  +..
T Consensus        49 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~  119 (333)
T 1mqb_A           49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT------EKQRVDFLGEAGIMGQFS---HHNIIRLEGVISKYK  119 (333)
T ss_dssp             EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCC------HHHHHHHHHHHHHHHTCC---CTTBCCEEEEECSSS
T ss_pred             ccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCC------HHHHHHHHHHHHHHHhCC---CCCCCcEEEEEecCC
Confidence            5779999999999997642  1    388887643211      112235566777777663   2345555544  445


Q ss_pred             CceEEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhcc
Q 045250          109 MSLIGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ...+|||+++  ...|.+.+...  ...    -.++.+|...|..+|...
T Consensus       120 ~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  167 (333)
T 1mqb_A          120 PMMIITEYME--NGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN  167 (333)
T ss_dssp             SEEEEEECCT--TEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CcEEEEeCCC--CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            6789999998  45787777653  222    257788889999999753

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=95.74  E-value=0.016  Score=46.29  Aligned_cols=111  Identities=14%  Similarity=0.059  Sum_probs=66.8

Q ss_pred             CCcc-eeEeccCCceeEEEEEEeCCC-----eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE
Q 045250           32 FDDL-TIKEVGDGNLNFVYIVVGTSG-----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF  105 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rV~~~~g-----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~  105 (165)
                      .+.+ -.+.+|.|....||++.+...     .++||.-......     .-..++...|+++|+.+.   -.++++++.+
T Consensus        22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~E~~~l~~l~---h~~iv~~~~~   93 (323)
T 3qup_A           22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIA-----SSDIEEFLREAACMKEFD---HPHVAKLVGV   93 (323)
T ss_dssp             ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC-----------CHHHHHHHHHHHHHTTCC---CTTBCCCCEE
T ss_pred             hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccC-----HHHHHHHHHHHHHHHHCC---CCceehhhce
Confidence            3445 567899999999999987532     5788876543211     123567778888887763   2344455443


Q ss_pred             --cCCCc------eEEEecCCCCchHHHHHHHcCC-------CC----HHHHHHHHHHHHHHHhcc
Q 045250          106 --DRTMS------LIGMRYLEPPHIILRKGLIAGI-------KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 --D~e~~------~~vMEdl~~~~~~lr~~l~~g~-------~~----~~~a~~iG~~La~~h~~t  152 (165)
                        +....      .+|||++.  +..|.+.+....       ..    -.++.+|...|+-+|...
T Consensus        94 ~~~~~~~~~~~~~~~v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~  157 (323)
T 3qup_A           94 SLRSRAKGRLPIPMVILPFMK--HGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN  157 (323)
T ss_dssp             EECC-------CEEEEEECCT--TCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eeccccccCCCccEEEEEecc--CCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC
Confidence              33333      79999998  346766664421       21    257888899999999754

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=95.70  E-value=0.07  Score=43.20  Aligned_cols=110  Identities=14%  Similarity=0.090  Sum_probs=72.2

Q ss_pred             eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCC-----CCChHHHHHHHHHHHHhhccCCCCCceEEEE----
Q 045250           36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESW-----PMTKERAYFEALALKEHGKLCPDHVPEVYHF----  105 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~-----~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~----  105 (165)
                      -.+.||.|....||++.+.+| .++||.-...... ....     .....+...|.++|+.+..  |.. .+++.+    
T Consensus        26 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~~i-v~~~~~~~~~  101 (362)
T 3pg1_A           26 VQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSD-GRTVNILSDSFLCKRVLREIRLLNHFHH--PNI-LGLRDIFVHF  101 (362)
T ss_dssp             EEEEEEEETTEEEEEEECTTSCEEEEEEECEECCT-TSCEEGGGSHHHHHHHHHHHHHHHHCCC--TTB-CCCSEEEEEC
T ss_pred             EeEEeccCCCEEEEEEECCCCCeEEEEeccccCCc-cchhhhhhhhhHHHHHHHHHHHHHhCCC--cCc-cceeeeEEec
Confidence            568899999999999998777 8999987654321 1111     1113678889999988752  333 333322    


Q ss_pred             cCC---CceEEEecCCCCchHHHHHHHcCC--CCH----HHHHHHHHHHHHHHhcc
Q 045250          106 DRT---MSLIGMRYLEPPHIILRKGLIAGI--KYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~e---~~~~vMEdl~~~~~~lr~~l~~g~--~~~----~~a~~iG~~La~~h~~t  152 (165)
                      +..   ...+|||+++  + .+.+.+....  ..+    .++.+|...|.-+|...
T Consensus       102 ~~~~~~~~~lv~e~~~--~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  154 (362)
T 3pg1_A          102 EEPAMHKLYLVTELMR--T-DLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAG  154 (362)
T ss_dssp             CTTTCCEEEEEEECCS--E-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCCCcceEEEEEccCC--C-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCc
Confidence            111   3479999998  3 5666666543  222    47788889999999763

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=95.68  E-value=0.0099  Score=47.89  Aligned_cols=108  Identities=9%  Similarity=-0.034  Sum_probs=71.5

Q ss_pred             eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCC-----------CCChHHHHHHHHHHHHhhccCCCCCceEE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESW-----------PMTKERAYFEALALKEHGKLCPDHVPEVY  103 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~-----------~l~~~R~~~E~~~L~~~~~~~p~~vP~v~  103 (165)
                      -++.+|.|....||++.. +| .++||.-....... ...           ....++...|.++|+.+..  | ++++++
T Consensus        35 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~-~i~~~~  109 (348)
T 2pml_X           35 IIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEK-KRDFTKSNNDKISIKSKYDDFKNELQIITDIKN--E-YCLTCE  109 (348)
T ss_dssp             EEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSS-CEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCC--T-TBCCCS
T ss_pred             EEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccc-hhhhccccchhhhHHhHHHHHHHHHHHHHhCCC--C-CcceEE
Confidence            567899999999999999 56 89999866443210 000           0011678888888887742  3 333333


Q ss_pred             --EEcCCCceEEEecCCCCchHHHHH------HHc--CC-CC----HHHHHHHHHHHHHHHh
Q 045250          104 --HFDRTMSLIGMRYLEPPHIILRKG------LIA--GI-KY----PLLAEHMSEFMAKTLF  150 (165)
Q Consensus       104 --~~D~e~~~~vMEdl~~~~~~lr~~------l~~--g~-~~----~~~a~~iG~~La~~h~  150 (165)
                        +.+.+...+|||+++  +.+|.+.      +..  +. ..    -.++.+|...|+-+|.
T Consensus       110 ~~~~~~~~~~lv~e~~~--~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  169 (348)
T 2pml_X          110 GIITNYDEVYIIYEYME--NDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN  169 (348)
T ss_dssp             EEEESSSEEEEEEECCT--TCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeeCCeEEEEEeccC--CCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhc
Confidence              346778899999997  3455554      333  22 22    2578889999999997

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=95.68  E-value=0.084  Score=46.92  Aligned_cols=103  Identities=19%  Similarity=-0.002  Sum_probs=71.2

Q ss_pred             eccCCceeEEEEEEeC---CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCceEEE
Q 045250           39 EVGDGNLNFVYIVVGT---SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGM  114 (165)
Q Consensus        39 ~l~~Gn~N~v~rV~~~---~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vM  114 (165)
                      .||.|..-.||++...   ++ .|.||.-..-.      -....++...|+++|+.+..  |..+.-.-.+..+...+||
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~------~~~~~~~~~~E~~il~~l~h--pniv~l~~~~~~~~~~lv~  414 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT------EKADTEEMMREAQIMHQLDN--PYIVRLIGVCQAEALMLVM  414 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCC------SSTTHHHHHHHHHHHTTCCC--TTBCCEEEEEESSSEEEEE
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC------ChHHHHHHHHHHHHHHhCCC--CCEeeEEEEeccCCeEEEE
Confidence            6899999999998763   33 68889865321      12356788889999987632  4444433344456778999


Q ss_pred             ecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhc
Q 045250          115 RYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       115 Edl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~  151 (165)
                      |+++  ...|.+.|....  ..    -.++.+|...|+-+|..
T Consensus       415 E~~~--~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~  455 (613)
T 2ozo_A          415 EMAG--GGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK  455 (613)
T ss_dssp             ECCT--TCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EeCC--CCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9998  347777775432  22    25788899999999975

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=95.66  E-value=0.06  Score=46.05  Aligned_cols=106  Identities=12%  Similarity=0.097  Sum_probs=69.2

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -.+.||.|....||++.+. +| .+.+|.-......     .-...+...|+++|+.+..  |. +++++.  .+.....
T Consensus        15 i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~-----~~~~~~~~~E~~il~~l~h--pn-Iv~l~~~~~~~~~~~   86 (444)
T 3soa_A           15 LFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLS-----ARDHQKLEREARICRLLKH--PN-IVRLHDSISEEGHHY   86 (444)
T ss_dssp             EEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCH-----HHHHHHHHHHHHHHHHCCB--TT-BCCEEEEEECSSEEE
T ss_pred             EEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCC-----HHHHHHHHHHHHHHHhCCC--cC-CCeEEEEEEECCEEE
Confidence            4678999999999999875 55 7888864422110     0123566788888887742  43 344443  3556678


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      +|||++.  +..|.+.+.+...+     ..++.+|...|.-+|..
T Consensus        87 lv~E~~~--gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~  129 (444)
T 3soa_A           87 LIFDLVT--GGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM  129 (444)
T ss_dssp             EEECCCB--CCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEeCC--CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999998  34676777665443     25778888889889865

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=95.64  E-value=0.089  Score=43.29  Aligned_cols=104  Identities=14%  Similarity=-0.034  Sum_probs=71.4

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCC---CCCceEE--EEcCC
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCP---DHVPEVY--HFDRT  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p---~~vP~v~--~~D~e  108 (165)
                      -.+.||.|....||++.+. +| .|+||.-...-        ....+...|.++|+.+.....   .+++.++  +.+..
T Consensus        58 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  129 (382)
T 2vx3_A           58 IDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK--------AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN  129 (382)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH--------HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred             EEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH--------HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence            4578999999999999876 45 79999764221        123567778888888765421   2344444  33557


Q ss_pred             CceEEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHh
Q 045250          109 MSLIGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLF  150 (165)
Q Consensus       109 ~~~~vMEdl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~  150 (165)
                      ...+|||+++  + .|.+.+....   ..    -.++.+|...|+-+|.
T Consensus       130 ~~~lv~e~~~--~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~  175 (382)
T 2vx3_A          130 HLCLVFEMLS--Y-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT  175 (382)
T ss_dssp             EEEEEEECCC--C-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTS
T ss_pred             ceEEEEecCC--C-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence            7789999997  3 6777776543   22    2577888888888884

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=95.63  E-value=0.047  Score=49.22  Aligned_cols=109  Identities=14%  Similarity=0.022  Sum_probs=74.2

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~  111 (165)
                      -+..||.|..--||++... +| .+.||.-.......    .-..++...|.++|.....  +.+++.++.+  +.+...
T Consensus       345 ~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~----~~~~~~~~~E~~~l~~~~~--~~~i~~l~~~~~~~~~~~  418 (674)
T 3pfq_A          345 FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ----DDDVECTMVEKRVLALPGK--PPFLTQLHSCFQTMDRLY  418 (674)
T ss_dssp             EEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHH----TTTTHHHHHHHHHHTCTTC--CTTBCCEEEECBCSSEEE
T ss_pred             EEEEEccCCCEEEEEEEECCCCcEEEEEEEecccccc----HHHHHHHHHHHHHHHhccC--CCeEEEEEEEEEeCCEEE
Confidence            4578999999999999976 34 68999765432211    1245778888888876554  3345555543  445567


Q ss_pred             EEEecCCCCchHHHHHHHcC-CCCH----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAG-IKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g-~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  +..|.+.+... ....    .++.+|...|.-+|...
T Consensus       419 lV~E~~~--gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~g  462 (674)
T 3pfq_A          419 FVMEYVN--GGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG  462 (674)
T ss_dssp             EEEECCC--SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTS
T ss_pred             EEEeCcC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999998  34777777663 3322    46788888999999763

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=95.62  E-value=0.0059  Score=50.33  Aligned_cols=107  Identities=13%  Similarity=0.136  Sum_probs=65.9

Q ss_pred             eeEeccCCceeEEEEEEeC----CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCC
Q 045250           36 TIKEVGDGNLNFVYIVVGT----SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRT  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~----~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e  108 (165)
                      -++.||.|..--||++...    .+ .+.||.-....... .    ...|...|+++|+.+.-  | ++.++|.  .|++
T Consensus        28 i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~-~----~~~~~~~E~~il~~l~H--p-nIv~l~~~~~~~~   99 (304)
T 3ubd_A           28 LLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV-R----DRVRTKMERDILVEVNH--P-FIVKLHYAFQTEG   99 (304)
T ss_dssp             EEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEE-E----ECC------CCCCCCCC--T-TEECEEEEEEETT
T ss_pred             EEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcCh-H----HHHHHHHHHHHHHHCCC--C-CCCeEEEEEEECC
Confidence            5678999999999999763    23 58888754322111 1    12356678887765531  3 3444443  4667


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          109 MSLIGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      ...+||||++  +.+|.+.|.+...+ +    .++.+|...|.-+|...
T Consensus       100 ~~~ivmEy~~--gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~  146 (304)
T 3ubd_A          100 KLYLILDFLR--GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG  146 (304)
T ss_dssp             EEEEEECCCT--TCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEEEcCC--CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            7889999998  34777777664433 2    46678888899898753

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=95.61  E-value=0.017  Score=51.81  Aligned_cols=105  Identities=14%  Similarity=0.128  Sum_probs=67.6

Q ss_pred             eeEeccCCceeEEEEEEeC--CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC--CC-
Q 045250           36 TIKEVGDGNLNFVYIVVGT--SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR--TM-  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~--~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~--e~-  109 (165)
                      -...||.|....||++.+.  +| .|+||.-.+.      ...-...+...|.++|+.+.   -.++++++.+-.  +. 
T Consensus        84 i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~------~~~~~~~~~~~E~~~l~~l~---hp~iv~~~~~~~~~~~~  154 (681)
T 2pzi_A           84 VKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS------GDAEAQAMAMAERQFLAEVV---HPSIVQIFNFVEHTDRH  154 (681)
T ss_dssp             EEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS------CCHHHHHHHHHHHGGGGGCC---CTTBCCEEEEEEEECTT
T ss_pred             EEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc------CCHHHHHHHHHHHHHHHhcC---CCCcCeEeeeEeecCCC
Confidence            4567899999999999875  45 7999976531      11222345667777776553   345666665533  22 


Q ss_pred             ----ceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250          110 ----SLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ----~~~vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                          ..+|||+++  +.+|++.+.. ...    -.++.+|...|.-+|...
T Consensus       155 ~~~~~~lv~E~~~--g~~L~~~~~~-~l~~~~~~~~~~qi~~aL~~lH~~g  202 (681)
T 2pzi_A          155 GDPVGYIVMEYVG--GQSLKRSKGQ-KLPVAEAIAYLLEILPALSYLHSIG  202 (681)
T ss_dssp             SCEEEEEEEECCC--CEECC----C-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCceeEEEEEeCC--CCcHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence                489999998  3466665543 332    257888899999999764

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=95.55  E-value=0.034  Score=44.14  Aligned_cols=106  Identities=21%  Similarity=0.173  Sum_probs=68.3

Q ss_pred             eeEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c
Q 045250           36 TIKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--D  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D  106 (165)
                      -.+.||.|....||++...      ++ .++||.-.....      .-...+...|.++|+.+.  .| ++++++.+  +
T Consensus        29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~--h~-~i~~~~~~~~~   99 (322)
T 1p4o_A           29 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS------MRERIEFLNEASVMKEFN--CH-HVVRLLGVVSQ   99 (322)
T ss_dssp             EEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSC------HHHHHHHHHHHHHGGGCC--CT-TBCCEEEEECS
T ss_pred             eeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccC------HHHHHHHHHHHHHHHhcC--CC-CEeeeEEEEcc
Confidence            4578999999999998754      23 688897652211      111234556777776653  23 45555543  5


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcC-----------CCC----HHHHHHHHHHHHHHHhcc
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLIAG-----------IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~~g-----------~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .....+|||+++  +.+|.+.+...           ...    -.++.+|...|..+|...
T Consensus       100 ~~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  158 (322)
T 1p4o_A          100 GQPTLVIMELMT--RGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK  158 (322)
T ss_dssp             SSSCEEEEECCT--TCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCccEEEEEeCC--CCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC
Confidence            567789999997  34666666541           111    247888999999999763

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=95.54  E-value=0.014  Score=45.72  Aligned_cols=109  Identities=13%  Similarity=0.047  Sum_probs=59.1

Q ss_pred             Ccc-eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcC
Q 045250           33 DDL-TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDR  107 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~  107 (165)
                      ..+ -.+.||.|....||++.+. +| .++||.-.....      .-..++...|..+|+.+.   -.++++++  +.+.
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~   85 (303)
T 2vwi_A           15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC------QTSMDELLKEIQAMSQCH---HPNIVSYYTSFVVK   85 (303)
T ss_dssp             CCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------------CCCCCC---CTTBCCEEEEEESS
T ss_pred             hhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc------chhHHHHHHHHHHHhhcC---CCCEeeEEEEEeec
Confidence            344 5788999999999999875 44 899997643211      112344555655554432   23444544  3566


Q ss_pred             CCceEEEecCCCCchHHHHHHHc---------CCCC----HHHHHHHHHHHHHHHhcc
Q 045250          108 TMSLIGMRYLEPPHIILRKGLIA---------GIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 e~~~~vMEdl~~~~~~lr~~l~~---------g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +...+|||+++  ..+|.+.+..         +...    -.++.+|...|..+|...
T Consensus        86 ~~~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  141 (303)
T 2vwi_A           86 DELWLVMKLLS--GGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG  141 (303)
T ss_dssp             SCEEEEEECCT--TCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCcEEEehhcc--CCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            77889999997  3356665542         2222    257788899999999753

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=95.53  E-value=0.073  Score=43.65  Aligned_cols=107  Identities=13%  Similarity=0.049  Sum_probs=71.5

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -.+.||.|....||++... +| .++||.-....... .   -...+...|.++|+.+..  | ++++++.  .++....
T Consensus        13 i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~-~---~~~~~~~~E~~~l~~l~h--p-nIv~l~~~~~~~~~~~   85 (336)
T 3h4j_B           13 IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKK-S---DMHMRVEREISYLKLLRH--P-HIIKLYDVITTPTDIV   85 (336)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH-T---TCSHHHHHHHHHHTTCCC--T-TBCCEEEEEECSSEEE
T ss_pred             EEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccc-h---hHHHHHHHHHHHHHhCCC--C-CCCeEEEEEEeCCEEE
Confidence            5678999999999999975 45 89999765432111 1   123577888888876642  3 4445544  3556678


Q ss_pred             EEEecCCCCchHHHHHHHcCC-CCH----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGI-KYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~-~~~----~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  + .+.+.+.+.. ...    .++.+|...|.-+|...
T Consensus        86 lv~E~~~--g-~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~g  128 (336)
T 3h4j_B           86 MVIEYAG--G-ELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK  128 (336)
T ss_dssp             EEECCCC--E-EHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEECCC--C-cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999996  3 4556555443 322    56778888888888653

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=95.53  E-value=0.1  Score=40.61  Aligned_cols=105  Identities=13%  Similarity=-0.013  Sum_probs=69.2

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      ....||.|....||++.+. ++ .|+||.....-       .-..++...|...|+.+..  |. +++++.  .+.....
T Consensus        26 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~e~~~l~~l~h--~~-iv~~~~~~~~~~~~~   95 (295)
T 2clq_A           26 DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD-------SRYSQPLHEEIALHKHLKH--KN-IVQYLGSFSENGFIK   95 (295)
T ss_dssp             SBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC-------C---HHHHHHHHHHHTCCC--TT-BCCEEEEEEETTEEE
T ss_pred             CcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc-------hHHHHHHHHHHHHHHhCCC--CC-EeeEeeEEEeCCcEE
Confidence            3446899999999999975 45 78999754211       1234677788888877642  43 333433  3455678


Q ss_pred             EEEecCCCCchHHHHHHHcCC---C-C----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGI---K-Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~---~-~----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  ...|.+.+....   . .    ..++.+|...|..+|...
T Consensus        96 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  142 (295)
T 2clq_A           96 IFMEQVP--GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ  142 (295)
T ss_dssp             EEEECCS--EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEeCC--CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999997  457777776542   1 1    235788999999999753

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=95.52  E-value=0.12  Score=41.21  Aligned_cols=107  Identities=15%  Similarity=0.150  Sum_probs=64.1

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~  111 (165)
                      .+..||.|..-.||++.+. +| .++||........     .-...+...|...+.....  -..+++++.+  +.....
T Consensus        61 ~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~e~~~~~~~~~--h~~iv~l~~~~~~~~~~~  133 (311)
T 3p1a_A           61 RLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRG-----PKDRARKLAEVGSHEKVGQ--HPCCVRLEQAWEEGGILY  133 (311)
T ss_dssp             EEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCS-----HHHHHHHHHHHHHHHHHCC--CTTBCCEEEEEEETTEEE
T ss_pred             eeheeccCCCeEEEEEEECCCCeEEEEEEecccccC-----hHHHHHHHHHHHHHHHhcC--CCcEEEEEEEEEeCCEEE
Confidence            4568999999999999886 55 8999974322211     1112233334333433322  2234444433  455678


Q ss_pred             EEEecCCCCchHHHHHHHc-CC-CC----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIA-GI-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~-g~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++.   .|.+.+.. +. ..    -.++.+|...|+-+|...
T Consensus       134 lv~e~~~~---~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  177 (311)
T 3p1a_A          134 LQTELCGP---SLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQG  177 (311)
T ss_dssp             EEEECCCC---BHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeccCC---CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999973   44444444 32 22    247888999999999753

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=95.47  E-value=0.079  Score=42.94  Aligned_cols=101  Identities=15%  Similarity=0.072  Sum_probs=70.3

Q ss_pred             eeEeccCCceeEEEEEEeCC---------C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhc--cC--------
Q 045250           36 TIKEVGDGNLNFVYIVVGTS---------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGK--LC--------   95 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~---------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~--~~--------   95 (165)
                      -.+.||.|....||++.+..         + .++||.....            ++...|.++|+.+..  ++        
T Consensus        46 ~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------------~~~~~E~~~l~~l~h~niv~~~~~~~~  113 (352)
T 2jii_A           46 LKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------------GRLFNEQNFFQRAAKPLQVNKWKKLYS  113 (352)
T ss_dssp             EEEEEEEETTEEEEEEEECC-----------CEEEEEEETT------------STHHHHHHHHHHHCCHHHHHHHHHHTT
T ss_pred             EEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc------------chHHHHHHHHHHhcccchhhhhhhhcc
Confidence            55889999999999998763         5 7889974321            467788888877643  11        


Q ss_pred             --CCCCceEEEEc---CCCceEEEecCCCCchHHHHHHHcC---CCC----HHHHHHHHHHHHHHHhc
Q 045250           96 --PDHVPEVYHFD---RTMSLIGMRYLEPPHIILRKGLIAG---IKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus        96 --p~~vP~v~~~D---~e~~~~vMEdl~~~~~~lr~~l~~g---~~~----~~~a~~iG~~La~~h~~  151 (165)
                        ...+|.++.+.   .....+|||+++   .+|.+.+...   ...    -.++.+|...|.-+|..
T Consensus       114 ~~~~~i~~~~~~~~~~~~~~~lv~e~~~---~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~  178 (352)
T 2jii_A          114 TPLLAIPTCMGFGVHQDKYRFLVLPSLG---RSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN  178 (352)
T ss_dssp             CTTCSCCCCCEEEEETTTEEEEEEECCC---EEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCccCccchhhccccCCcEEEEEecCCC---cCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence              13466666554   456689999995   3777777653   232    25788889999999976

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=95.46  E-value=0.11  Score=43.87  Aligned_cols=105  Identities=14%  Similarity=0.018  Sum_probs=71.4

Q ss_pred             eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCC---CCCceEEEE--cCC
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCP---DHVPEVYHF--DRT  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p---~~vP~v~~~--D~e  108 (165)
                      -++.||.|..-.||++.+.. + .|.||.-..--+        ...+...|.++|+.+.....   ..+.+++.+  +..
T Consensus       101 ~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~--------~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  172 (429)
T 3kvw_A          101 VLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKR--------FHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN  172 (429)
T ss_dssp             EEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHH--------HHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT
T ss_pred             EEEEcccCccEEEEEEEECCCCcEEEEEEECCccc--------hHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC
Confidence            36789999999999998763 5 799997643211        12456678888888876422   234444432  356


Q ss_pred             CceEEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhc
Q 045250          109 MSLIGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       109 ~~~~vMEdl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~  151 (165)
                      ...+|||+++ .  .|.+.+....   ..    -.++.+|...|+-+|..
T Consensus       173 ~~~lv~e~~~-~--~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~  219 (429)
T 3kvw_A          173 HICMTFELLS-M--NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN  219 (429)
T ss_dssp             EEEEEECCCC-C--BHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEeccC-C--CHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            6779999998 2  5666666543   22    25788889999999965

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=95.45  E-value=0.03  Score=45.06  Aligned_cols=105  Identities=14%  Similarity=0.062  Sum_probs=68.0

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~  111 (165)
                      .++.||.|....||++.+. +| .++||.-......   ..   ..+...|.++|+.+.   -.++++++.+  +.....
T Consensus         6 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~---~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~   76 (324)
T 3mtl_A            6 KLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE---GA---PCTAIREVSLLKDLK---HANIVTLHDIIHTEKSLT   76 (324)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEECC------------CCCCCCCHHHHSCCC---CTTBCCEEEEEECSSCEE
T ss_pred             EEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc---cc---chhHHHHHHHHHhcC---CCCCCeeeeEEeeCCEEE
Confidence            4678999999999999986 45 7999976432211   01   112234777776664   2345555543  567778


Q ss_pred             EEEecCCCCchHHHHHHHcC-CCC-----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAG-IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g-~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  . .|.+.+... ...     ..++.+|...|+-+|...
T Consensus        77 lv~e~~~--~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  120 (324)
T 3mtl_A           77 LVFEYLD--K-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK  120 (324)
T ss_dssp             EEEECCS--E-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEecccc--c-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  3 666666653 322     246778889999999653

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=95.41  E-value=0.1  Score=42.81  Aligned_cols=105  Identities=20%  Similarity=0.149  Sum_probs=67.8

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCCC-c-
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-DRTM-S-  110 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~e~-~-  110 (165)
                      ..+.||.|....||++.+. +| .++||.-..-.     .......+...|..+|+.+..  |. +++++.+ .... . 
T Consensus        46 ~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~E~~~l~~l~h--~n-iv~~~~~~~~~~~~~  117 (371)
T 4exu_A           46 SPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-----QSEIFAKRAYRELLLLKHMQH--EN-VIGLLDVFTPASSLR  117 (371)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT-----SSHHHHHHHHHHHHHHHHCCC--TT-BCCCSEEECSCSSST
T ss_pred             EEeEEecCCCeEEEEEEECCCCCEEEEEEecccc-----cchhHHHHHHHHHHHHHhcCC--CC-chhhhhheeccCCcc
Confidence            5677999999999999876 45 89999654221     112234677788888887752  43 3334333 2222 2 


Q ss_pred             -----eEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250          111 -----LIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 -----~~vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                           .+|||+++  . .|.+.+ .+...    -.++.+|...|.-+|...
T Consensus       118 ~~~~~~lv~e~~~--~-~l~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~  164 (371)
T 4exu_A          118 NFYDFYLVMPFMQ--T-DLQKIM-GMEFSEEKIQYLVYQMLKGLKYIHSAG  164 (371)
T ss_dssp             TCCCCEEEEECCC--E-EHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cceeEEEEEcccc--c-cHHHHh-hcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence                 89999998  2 455544 23332    247778889999999753

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=95.40  E-value=0.16  Score=40.16  Aligned_cols=105  Identities=14%  Similarity=0.118  Sum_probs=67.7

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-------
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD-------  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-------  106 (165)
                      -.+.||.|....||++.+. +| .++||.-...-       .-...+...|...|+.+... |. +.+++.+-       
T Consensus        32 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~e~~~l~~l~~h-~~-iv~~~~~~~~~~~~~  102 (337)
T 3ll6_A           32 VRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE-------EEKNRAIIQEVCFMKKLSGH-PN-IVQFCSAASIGKEES  102 (337)
T ss_dssp             EEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS-------HHHHHHHHHHHHHHHHHTTS-TT-BCCEEEEEEECTTTS
T ss_pred             EEEEEccCCceEEEEEEECCCCcEEEEEEecCCc-------hHHHHHHHHHHHHHHHhccC-CC-hhhcccccccccccc
Confidence            4578999999999999975 45 89999752211       12234566788888777543 33 33343322       


Q ss_pred             ---CCCceEEEecCCCCchHHHHHHHc----CCCC----HHHHHHHHHHHHHHHhcc
Q 045250          107 ---RTMSLIGMRYLEPPHIILRKGLIA----GIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ---~e~~~~vMEdl~~~~~~lr~~l~~----g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                         .....++||+++  + .|.+.+..    +...    -.++.+|...|+-+|...
T Consensus       103 ~~~~~~~~lv~e~~~--g-~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~  156 (337)
T 3ll6_A          103 DTGQAEFLLLTELCK--G-QLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQK  156 (337)
T ss_dssp             TTSSEEEEEEEECCS--E-EHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred             ccCCceEEEEEEecC--C-CHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence               223689999997  2 45554433    3332    257888899999999765

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=95.37  E-value=0.089  Score=44.38  Aligned_cols=106  Identities=14%  Similarity=0.043  Sum_probs=65.2

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-------
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD-------  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-------  106 (165)
                      -++.||.|....||++.+. +| .|.||.-.....     -.....|...|.++|+.+.   -.++.+++.+-       
T Consensus        57 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~-----~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~  128 (458)
T 3rp9_A           57 IRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFE-----DLIDCKRILREIAILNRLN---HDHVVKVLDIVIPKDVEK  128 (458)
T ss_dssp             ECCC-------CEEEEEECC--CEEEEEEECSTTS-----SHHHHHHHHHHHHHHHHCC---CTTBCCEEEECCCSCTTT
T ss_pred             EeeEeeecCCeEEEEEEECCCCcEEEEEEechhhc-----CHHHHHHHHHHHHHHHhCC---CCCCCceEEEEecCCccc
Confidence            4567899999999999876 45 799997643221     1234568888999998874   23445555442       


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      .....+|||+++  . .|.+.+..+..+     -.++.+|...|.-+|...
T Consensus       129 ~~~~~lv~e~~~--~-~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~  176 (458)
T 3rp9_A          129 FDELYVVLEIAD--S-DFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAG  176 (458)
T ss_dssp             CCCEEEEECCCS--E-EHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CceEEEEEeccc--c-chhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            134689999886  2 677777766543     247788889999999753

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=95.37  E-value=0.14  Score=41.90  Aligned_cols=105  Identities=15%  Similarity=0.075  Sum_probs=68.6

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC-C----
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR-T----  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~-e----  108 (165)
                      -++.||.|....||++.+. +| .++||.-.....     -.-...+...|..+|+.+..  | ++.+++.+-. .    
T Consensus        29 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--p-niv~~~~~~~~~~~~~  100 (371)
T 2xrw_A           29 NLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ-----NQTHAKRAYRELVLMKCVNH--K-NIIGLLNVFTPQKSLE  100 (371)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTS-----SHHHHHHHHHHHHHHHHCCC--T-TBCCEEEEECSCCSTT
T ss_pred             EeeeeEecCCEEEEEEEECCCCceEEEEEeccccC-----ChHHHHHHHHHHHHHHhcCC--C-CccceEEeeccccccc
Confidence            5678999999999999876 45 799997542111     11223566778888877642  3 3444444322 2    


Q ss_pred             ---CceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250          109 ---MSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ---~~~~vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                         ...+|||+++ .  .+.+.+.. ...    ..++.+|...|+-+|...
T Consensus       101 ~~~~~~lv~e~~~-~--~l~~~~~~-~~~~~~~~~i~~qi~~al~~lH~~~  147 (371)
T 2xrw_A          101 EFQDVYIVMELMD-A--NLCQVIQM-ELDHERMSYLLYQMLCGIKHLHSAG  147 (371)
T ss_dssp             TCCEEEEEEECCS-E--EHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccceEEEEEcCC-C--CHHHHHhh-ccCHHHHHHHHHHHHHHHHHHHHCC
Confidence               3589999998 2  46666643 333    247788899999999753

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=95.36  E-value=0.077  Score=42.90  Aligned_cols=108  Identities=10%  Similarity=0.011  Sum_probs=72.0

Q ss_pred             Ccc-eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccC--------CCCCce
Q 045250           33 DDL-TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLC--------PDHVPE  101 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~--------p~~vP~  101 (165)
                      +.+ -++.||.|....||++.+. +| .++||.-..-        ....++...|..+|+.+....        -.++++
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~   90 (373)
T 1q8y_A           19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD--------KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILK   90 (373)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC--------HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCC
T ss_pred             CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC--------ccchhhhhHHHHHHHHhhcccccchhccccchHHH
Confidence            344 5788999999999999975 45 8999975421        123466778888988886421        123444


Q ss_pred             EEEEcC------CCceEEEecCCCCchHHHHHHHc---CCCC----HHHHHHHHHHHHHHHhc
Q 045250          102 VYHFDR------TMSLIGMRYLEPPHIILRKGLIA---GIKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       102 v~~~D~------e~~~~vMEdl~~~~~~lr~~l~~---g~~~----~~~a~~iG~~La~~h~~  151 (165)
                      ++.+-.      ....++||+++   ..|.+.+..   +...    -.++.+|...|+-+|..
T Consensus        91 ~~~~~~~~~~~~~~~~lv~e~~~---~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~  150 (373)
T 1q8y_A           91 LLDHFNHKGPNGVHVVMVFEVLG---ENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRR  150 (373)
T ss_dssp             CCEEEEEEETTEEEEEEEECCCC---EEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHhhccCCCCceEEEEEecCC---CCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence            443321      25789999996   256666654   2222    25788889999999986

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=95.35  E-value=0.099  Score=47.90  Aligned_cols=110  Identities=14%  Similarity=0.019  Sum_probs=74.0

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCcc-ccccCCCCCCChHHHHHHHHHHHHhhccC-CCCCceEE-EEcCCCc
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPY-VRCIGESWPMTKERAYFEALALKEHGKLC-PDHVPEVY-HFDRTMS  110 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~-~r~~~~~~~l~~~R~~~E~~~L~~~~~~~-p~~vP~v~-~~D~e~~  110 (165)
                      -++.||.|..--||++... +| .+.||.-... +..     .-.......|...|+.+..+- |..|.-.. +.|++..
T Consensus       193 i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~-----~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l  267 (689)
T 3v5w_A          193 VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM-----KQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL  267 (689)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH-----TTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             EEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcch-----hhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence            4578999999999999876 45 7888864322 111     123456667777777776643 44443332 3467778


Q ss_pred             eEEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          111 LIGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      .+||||++  +..|.+.|.+...+ .    .++.+|...|.-+|...
T Consensus       268 ylVmEy~~--GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~g  312 (689)
T 3v5w_A          268 SFILDLMN--GGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF  312 (689)
T ss_dssp             EEEECCCC--SCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             EEEEecCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            89999998  34777777664433 2    46778888888888754

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=95.34  E-value=0.28  Score=38.50  Aligned_cols=107  Identities=13%  Similarity=0.080  Sum_probs=56.6

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      .++.||.|....||++.+. +| .++||.......      .-...+...|...+  +..+--.++++++.  .+.+...
T Consensus        29 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~~~~~--~~~~~h~~i~~~~~~~~~~~~~~  100 (318)
T 2dyl_A           29 NLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN------KEENKRILMDLDVV--LKSHDCPYIVQCFGTFITNTDVF  100 (318)
T ss_dssp             EEEEC------CEEEEEETTTCCEEEEEEEETTSC------HHHHHHHHHHHHHH--HHTTTCTTBCCEEEEEECSSEEE
T ss_pred             ccceeeecCCeeEEEEEEecCCeEEEEEEeccccc------chHHHHHHHHHHHH--HHhcCCCceeeEEEEEecCCcEE
Confidence            4678999999999999986 45 899997642211      11112333333322  22222234555554  3666779


Q ss_pred             EEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~  151 (165)
                      +|||+++.....+... ..+....    .++.+|...|..+|..
T Consensus       101 lv~e~~~~~~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~  143 (318)
T 2dyl_A          101 IAMELMGTCAEKLKKR-MQGPIPERILGKMTVAIVKALYYLKEK  143 (318)
T ss_dssp             EEECCCSEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeccCCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhh
Confidence            9999997322222221 1233332    5778888999999973

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=95.33  E-value=0.078  Score=47.00  Aligned_cols=103  Identities=14%  Similarity=0.089  Sum_probs=70.1

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~  112 (165)
                      .+.||.|..-.||++... +| .+.||.-...       -....++...|.++|+.+..  |. +-+++  +.|.....+
T Consensus       162 ~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~-------~~~~~~~~~~Ei~il~~l~h--pn-Iv~l~~~~~~~~~~~i  231 (573)
T 3uto_A          162 HEELGTGAFGVVHRVTERATGNNFAAKFVMTP-------HESDKETVRKEIQTMSVLRH--PT-LVNLHDAFEDDNEMVM  231 (573)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------SHHHHHHHHHHHHHHHHTCC--TT-BCCEEEEEECSSEEEE
T ss_pred             EEEEeeccCeEEEEEEECCCCCEEEEEEEecc-------chhhHHHHHHHHHHHHhCCC--CC-CCeEEEEEEECCEEEE
Confidence            578999999999999875 55 7888863211       11234677789999988752  33 33343  347778889


Q ss_pred             EEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhc
Q 045250          113 GMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~  151 (165)
                      ||||++  +..|.+.|.+.  ...    ..++.+|...|.-+|..
T Consensus       232 v~E~~~--gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~  274 (573)
T 3uto_A          232 IYEFMS--GGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN  274 (573)
T ss_dssp             EEECCC--CCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEeecC--CCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999998  34777777542  222    24667788888888865

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=95.28  E-value=0.12  Score=43.19  Aligned_cols=106  Identities=11%  Similarity=-0.051  Sum_probs=68.4

Q ss_pred             eEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-E-cC
Q 045250           37 IKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH-F-DR  107 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~-D~  107 (165)
                      .+.||.|..--||++...      ++ .|.||.-..-..      .-...+...|.++|+.+... | ++-++|. + ++
T Consensus        69 ~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~------~~~~~~~~~E~~il~~l~hh-p-nIV~l~g~~~~~  140 (353)
T 4ase_A           69 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT------HSEHRALMSELKILIHIGHH-L-NVVNLLGACTKP  140 (353)
T ss_dssp             EEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCC------HHHHHHHHHHHHHHHHHCCC-T-TBCCEEEEECCT
T ss_pred             eeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccC------hHHHHHHHHHHHHHHHcCCC-C-cEEEEEEEEEec
Confidence            467999999999999753      22 467776432211      11234566788888777542 3 3445554 3 33


Q ss_pred             C-CceEEEecCCCCchHHHHHHHcCC-----------------CC----HHHHHHHHHHHHHHHhcc
Q 045250          108 T-MSLIGMRYLEPPHIILRKGLIAGI-----------------KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 e-~~~~vMEdl~~~~~~lr~~l~~g~-----------------~~----~~~a~~iG~~La~~h~~t  152 (165)
                      . ...+||||++  +.+|.+.|.+..                 ..    -.++.+|+..|.-+|...
T Consensus       141 ~~~~~iV~Ey~~--~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~  205 (353)
T 4ase_A          141 GGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK  205 (353)
T ss_dssp             TSCCEEEEECCT--TEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEEEEcCC--CCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC
Confidence            3 3579999998  458888886421                 11    257889999999999753

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=95.25  E-value=0.13  Score=43.84  Aligned_cols=108  Identities=14%  Similarity=-0.003  Sum_probs=71.8

Q ss_pred             eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -++.||.|..--||++...+ | .+.||.-....... .   ........|..+|+...  .| ++.+++.  .|.+...
T Consensus        78 ~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~-~---~~~~~~~~E~~il~~~~--hp-~Iv~l~~~~~~~~~~~  150 (437)
T 4aw2_A           78 ILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLK-R---AETACFREERDVLVNGD--SK-WITTLHYAFQDDNNLY  150 (437)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHH-T---TTTCCHHHHHHHHHHSC--TT-TBCCEEEEEECSSEEE
T ss_pred             EEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhh-H---HHHHHHHHHHHHHHhCC--CC-CEEEEEEEEeeCCEEE
Confidence            56789999999999999874 4 68888764322111 1   12234667888887652  23 3444443  3566678


Q ss_pred             EEEecCCCCchHHHHHHHc--CCCCH----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIA--GIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~--g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  +..|.+.|.+  +....    .++.+|...|.-+|...
T Consensus       151 lV~Ey~~--gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g  195 (437)
T 4aw2_A          151 LVMDYYV--GGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH  195 (437)
T ss_dssp             EEECCCT--TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecCC--CCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999998  3478888876  33332    36778888888888753

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=95.24  E-value=0.098  Score=43.21  Aligned_cols=106  Identities=14%  Similarity=0.065  Sum_probs=63.7

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-------
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD-------  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-------  106 (165)
                      .++.||.|....||++.+. +| .|+||.-..-..     -.....|...|.++|+.+..  |. +.+++.+-       
T Consensus        33 ~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--pn-Iv~~~~~~~~~~~~~  104 (367)
T 2fst_X           33 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----SIIHAKRTYRELRLLKHMKH--EN-VIGLLDVFTPARSLE  104 (367)
T ss_dssp             EEEECC----CCEEEEEETTTTEEEEEEECSSTTS-----SHHHHHHHHHHHHHHHHCCC--TT-BCCCSEEECSCSSGG
T ss_pred             EeeEEeecCCeEEEEEEECCCCCEEEEEEeCcccc-----CHHHHHHHHHHHHHHHhCCC--CC-CCcEEEEEecCCccc
Confidence            5678999999999999875 45 899997643211     11334677789999987752  33 33333321       


Q ss_pred             -CCCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250          107 -RTMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 -~e~~~~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                       .....++||+++.   .|.+.+..+....    .++.+|...|.-+|...
T Consensus       105 ~~~~~~lv~e~~~~---~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g  152 (367)
T 2fst_X          105 EFNDVYLVTHLMGA---DLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD  152 (367)
T ss_dssp             GCCCCEEEEECCCE---ECC-----CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCCeEEEEecccCC---CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             1446889998862   4555554444432    57788899999999753

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=95.20  E-value=0.035  Score=43.98  Aligned_cols=111  Identities=14%  Similarity=-0.013  Sum_probs=67.2

Q ss_pred             CCcc-eeEeccCCceeEEEEEEeCC----C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE
Q 045250           32 FDDL-TIKEVGDGNLNFVYIVVGTS----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF  105 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rV~~~~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~  105 (165)
                      ...+ -.+.+|.|....||++....    + .++||.-.....     -.-..++...|.++|+.+.  .|. +.+++.+
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~e~~~l~~l~--h~~-iv~~~~~  104 (313)
T 3brb_A           33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS-----SQREIEEFLSEAACMKDFS--HPN-VIRLLGV  104 (313)
T ss_dssp             GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC-----CHHHHHHHHHHHHHHHTCC--CTT-BCCCCEE
T ss_pred             HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEecccc-----chhHHHHHHHHHHHHhcCC--CCC-eeeeeEE
Confidence            3345 45668999999999997642    2 588998653221     1112356677888887764  233 3444443


Q ss_pred             c--CC-----CceEEEecCCCCchHHHHHHHc------CC-CC----HHHHHHHHHHHHHHHhcc
Q 045250          106 D--RT-----MSLIGMRYLEPPHIILRKGLIA------GI-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D--~e-----~~~~vMEdl~~~~~~lr~~l~~------g~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      -  ..     ...+|||+++  +..|.+.+..      +. ..    -.++.+|...|..+|...
T Consensus       105 ~~~~~~~~~~~~~~v~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  167 (313)
T 3brb_A          105 CIEMSSQGIPKPMVILPFMK--YGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN  167 (313)
T ss_dssp             EEC-------CEEEEEECCT--TCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             EeeccccCCcccEEEEeccc--CCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            2  22     2389999998  4577777742      12 22    257888899999999763

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=95.19  E-value=0.074  Score=41.50  Aligned_cols=105  Identities=13%  Similarity=0.031  Sum_probs=68.2

Q ss_pred             eEeccCCceeEEEEEEeCC----C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCC
Q 045250           37 IKEVGDGNLNFVYIVVGTS----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTM  109 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~  109 (165)
                      .+.||.|....||++...+    + .++||.......      .-..++...|..+|+.+.  .|..+ +++.+  +.+.
T Consensus        26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~E~~~l~~l~--h~~iv-~~~~~~~~~~~   96 (298)
T 3pls_A           26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITE------MQQVEAFLREGLLMRGLN--HPNVL-ALIGIMLPPEG   96 (298)
T ss_dssp             EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCS------HHHHHHHHHHHHHHHTCC--CTTBC-CCCEEECCSSS
T ss_pred             CceeccCCCceEEEEEEecCCCceeeeeeeecccccc------HHHHHHHHHHHHHHHhCC--CCCee-eEEEEEecCCC
Confidence            3789999999999997532    2 477787543111      122356677888887764  24433 34433  3444


Q ss_pred             c-eEEEecCCCCchHHHHHHHcCC-CC-----HHHHHHHHHHHHHHHhcc
Q 045250          110 S-LIGMRYLEPPHIILRKGLIAGI-KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~-~~vMEdl~~~~~~lr~~l~~g~-~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      . .++||++.  ...|.+.+.... ..     -.++.+|...|+-+|...
T Consensus        97 ~~~~v~e~~~--~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~  144 (298)
T 3pls_A           97 LPHVLLPYMC--HGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQK  144 (298)
T ss_dssp             CCEEEECCCT--TCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CcEEEEeccc--CCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            4 79999997  347888777632 22     256778899999999763

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=95.19  E-value=0.15  Score=40.23  Aligned_cols=99  Identities=15%  Similarity=0.050  Sum_probs=67.1

Q ss_pred             EeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc------CCC
Q 045250           38 KEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD------RTM  109 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D------~e~  109 (165)
                      +.+|.|....||++.+. +| .++||.-..            ..+...|.+.+...... |. +++++.+-      ...
T Consensus        24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------------~~~~~~e~~~~~~~~~h-~~-i~~~~~~~~~~~~~~~~   89 (299)
T 3m2w_A           24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD------------CPKARREVELHWRASQC-PH-IVRIVDVYENLYAGRKC   89 (299)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEC------------SHHHHHHHHHHHHHTTS-TT-BCCEEEEEEEEETTEEE
T ss_pred             cccccCCCeEEEEEEEcCCCcEEEEEEecc------------cHHHHHHHHHHHHhccC-CC-chhHHhhhhhhcCCCce
Confidence            56999999999999885 45 899997421            24677788877555443 43 33444321      345


Q ss_pred             ceEEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ..+|||+++  +.+|.+.+....   ..    -.++.+|...|+-+|...
T Consensus        90 ~~lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  137 (299)
T 3m2w_A           90 LLIVMECLD--GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN  137 (299)
T ss_dssp             EEEEECCCC--SCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEeecC--CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            679999997  347777776532   22    257888888899998653

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=95.17  E-value=0.02  Score=48.43  Aligned_cols=106  Identities=14%  Similarity=0.088  Sum_probs=62.8

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -++.||.|....||++.+. +| .+.||.-....... .   -...+...|.++|+.+.  -| ++++++.  .+.+...
T Consensus       152 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~---~~~~~~~~e~~~l~~l~--h~-~iv~l~~~~~~~~~~~  224 (446)
T 4ejn_A          152 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA-K---DEVAHTLTENRVLQNSR--HP-FLTALKYSFQTHDRLC  224 (446)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-----------------CCCCCS--CT-TSCCEEEEEEETTEEE
T ss_pred             EeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhh-h---HHHHHHHHHHHHHHhCC--CC-eEeeEEEEEeeCCEEE
Confidence            4678999999999999875 45 79999765432211 1   12234556666665443  24 3444443  3445667


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHh
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLF  150 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~  150 (165)
                      +|||+++  ...|.+.+..+..+ .    .++.+|...|+-+|.
T Consensus       225 lv~e~~~--~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~  266 (446)
T 4ejn_A          225 FVMEYAN--GGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS  266 (446)
T ss_dssp             EEECCCS--SCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeeCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            9999998  34676777654433 2    467788999999997

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=95.10  E-value=0.03  Score=45.40  Aligned_cols=105  Identities=19%  Similarity=0.131  Sum_probs=67.4

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCC----
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-DRT----  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~e----  108 (165)
                      ..+.+|.|....||++.+. +| .++||.-..-..     ......+...|..+|+.+..  |..+ +++.+ ...    
T Consensus        28 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--~~iv-~~~~~~~~~~~~~   99 (353)
T 3coi_A           28 SPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ-----SEIFAKRAYRELLLLKHMQH--ENVI-GLLDVFTPASSLR   99 (353)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTS-----SHHHHHHHHHHHHHHHHCCC--TTBC-CCSEEECSCSSGG
T ss_pred             EeeeEecCCCeEEEEEEECCCCCEEEEEEeccccc-----chHHHHHHHHHHHHHHhcCC--CCcc-cHhheEecccccc
Confidence            5678999999999999876 46 899997642111     11234567788888887742  4333 33332 222    


Q ss_pred             ---CceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250          109 ---MSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ---~~~~vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                         ...+|||+++.   .|.+.+. ....    -.++.+|...|.-+|...
T Consensus       100 ~~~~~~lv~e~~~~---~l~~~~~-~~~~~~~~~~i~~qi~~al~~LH~~~  146 (353)
T 3coi_A          100 NFYDFYLVMPFMQT---DLQKIMG-LKFSEEKIQYLVYQMLKGLKYIHSAG  146 (353)
T ss_dssp             GCCCCEEEEECCSE---EGGGTTT-SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cceeEEEEeccccC---CHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence               23899999982   4544432 2232    257788889999999763

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=95.02  E-value=0.062  Score=44.61  Aligned_cols=105  Identities=15%  Similarity=0.105  Sum_probs=68.2

Q ss_pred             eEeccCCceeEEEEEEeC--CC---eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c-CC
Q 045250           37 IKEVGDGNLNFVYIVVGT--SG---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--D-RT  108 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~--~g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D-~e  108 (165)
                      .+.||.|....||++...  ++   .+.||.-....      -.-..++...|+.+|+.+.  -| ++.+++.+  + ..
T Consensus        94 ~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~E~~il~~l~--hp-nIv~~~~~~~~~~~  164 (373)
T 3c1x_A           94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT------DIGEVSQFLTEGIIMKDFS--HP-NVLSLLGICLRSEG  164 (373)
T ss_dssp             EEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS------CSHHHHHHHHHHTTSTTCC--CT-TBCCCCEEECCCSS
T ss_pred             CcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC------CHHHHHHHHHHHHHHHhCC--CC-CcceEEEEEEcCCC
Confidence            467999999999999763  33   47778654211      1122356667777766653  13 34445543  3 34


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCC--C----HHHHHHHHHHHHHHHhcc
Q 045250          109 MSLIGMRYLEPPHIILRKGLIAGIK--Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       109 ~~~~vMEdl~~~~~~lr~~l~~g~~--~----~~~a~~iG~~La~~h~~t  152 (165)
                      ...+|||+++  +.+|++.+.+...  .    -.++.+|...|+-+|...
T Consensus       165 ~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  212 (373)
T 3c1x_A          165 SPLVVLPYMK--HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK  212 (373)
T ss_dssp             CCEEEEECCT--TCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CeEEEEECCC--CCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            6689999998  4578888865332  1    256788999999999763

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=94.94  E-value=0.054  Score=45.15  Aligned_cols=109  Identities=10%  Similarity=0.028  Sum_probs=62.9

Q ss_pred             eeEeccCCceeEEEEEEeCC-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGTS-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -++.||.|...-||++.... + .+.||.-.......    .-...+...|..+|  +..+--.++++++.  .+.+...
T Consensus        42 ~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~----~~~~~~~~~e~~~l--l~~~~hp~Iv~l~~~~~~~~~~~  115 (373)
T 2r5t_A           42 FLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILK----KKEEKHIMSERNVL--LKNVKHPFLVGLHFSFQTADKLY  115 (373)
T ss_dssp             EEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-----------------CC--BCCCCCTTBCCEEEEEECSSEEE
T ss_pred             EEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhh----hHHHHHHHHHHHHH--HHhCCCCCCCCEEEEEEeCCEEE
Confidence            57889999999999999863 4 68888754322110    01122333344332  11122234444443  3566778


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  +..|.+.+.+...+ .    .++.+|...|.-+|...
T Consensus       116 lv~E~~~--gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~g  159 (373)
T 2r5t_A          116 FVLDYIN--GGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN  159 (373)
T ss_dssp             EEEECCC--SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeCCC--CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  34677777654433 2    36788889999999753

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=94.82  E-value=0.11  Score=44.00  Aligned_cols=111  Identities=15%  Similarity=0.100  Sum_probs=71.7

Q ss_pred             Ccc-eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcC
Q 045250           33 DDL-TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDR  107 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~  107 (165)
                      ++. -++.||.|..--||++... +| .+.||.-....... .   -..++...|..+|+....  | ++++++  +.|.
T Consensus        61 ~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~-~---~~~~~~~~E~~il~~~~h--p-~Iv~l~~~~~~~  133 (412)
T 2vd5_A           61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLK-R---GEVSCFREERDVLVNGDR--R-WITQLHFAFQDE  133 (412)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH-H---GGGCCHHHHHHHHHHSCT--T-TBCCEEEEEECS
T ss_pred             hhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhh-H---HHHHHHHHHHHHHHhcCC--C-CeeeEEEEEeeC
Confidence            344 5678999999999999985 45 79999764321110 0   112356678888866532  3 344443  3355


Q ss_pred             CCceEEEecCCCCchHHHHHHHc-CCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          108 TMSLIGMRYLEPPHIILRKGLIA-GIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 e~~~~vMEdl~~~~~~lr~~l~~-g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      +...+||||++  +..|.+.+.+ +..+ .    .++.+|...|.-+|...
T Consensus       134 ~~~~lVmE~~~--gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~g  182 (412)
T 2vd5_A          134 NYLYLVMEYYV--GGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLG  182 (412)
T ss_dssp             SEEEEEECCCC--SCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEEEcCCC--CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            66689999997  3477777765 3333 2    35778888899999753

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=94.73  E-value=0.19  Score=44.40  Aligned_cols=109  Identities=12%  Similarity=-0.003  Sum_probs=73.2

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH-FDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~e~~~~  112 (165)
                      .++.||.|...-||++... +| .+.||.-.......    .-...+...|.++|+.+..  |..+.-... .+.....+
T Consensus       189 ~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~----~~~~~~~~~E~~iL~~l~h--p~Iv~l~~~~~~~~~l~l  262 (543)
T 3c4z_A          189 DFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKK----RKGYQGAMVEKKILAKVHS--RFIVSLAYAFETKTDLCL  262 (543)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHH----TTCHHHHHHHHHHHHHCCC--TTBCCEEEEEECSSEEEE
T ss_pred             EEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhh----hHHHHHHHHHHHHHHhcCC--CCEeeEEEEEeeCCEEEE
Confidence            5678999999999999985 45 78899754332111    1234677889999987742  443333332 35566789


Q ss_pred             EEecCCCCchHHHHHHHcCC-----CCH----HHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGI-----KYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~-----~~~----~~a~~iG~~La~~h~~t  152 (165)
                      ||||++  +..|.+.+....     ...    .++.+|...|.-+|...
T Consensus       263 VmE~~~--gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g  309 (543)
T 3c4z_A          263 VMTIMN--GGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN  309 (543)
T ss_dssp             EECCCT--TCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecc--CCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC
Confidence            999998  457777776521     222    45778899999999753

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=94.71  E-value=0.19  Score=44.82  Aligned_cols=109  Identities=11%  Similarity=-0.047  Sum_probs=73.8

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EEcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY-HFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~D~e~~~~  112 (165)
                      .++.||.|...-||++... +| .+.||.-....-..    .-...+...|.++|+.+..  |..++-.. +.+.+...+
T Consensus       188 ~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~----~~~~~~~~~E~~iL~~l~h--p~Iv~l~~~~~~~~~l~l  261 (576)
T 2acx_A          188 QYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK----RKGEAMALNEKQILEKVNS--RFVVSLAYAYETKDALCL  261 (576)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH----TTCHHHHHHHHHHHHHCCC--TTBCCEEEEEECSSEEEE
T ss_pred             EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhh----hHHHHHHHHHHHHHHHcCC--CCEeeEEEEEeeCCEEEE
Confidence            5678999999999999885 45 78889764332111    1234567789999987742  44333333 335667789


Q ss_pred             EEecCCCCchHHHHHHHcCC---CCH----HHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGI---KYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~---~~~----~~a~~iG~~La~~h~~t  152 (165)
                      ||||++  +..|.+.+....   ...    .++.+|...|.-+|...
T Consensus       262 VmEy~~--gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g  306 (576)
T 2acx_A          262 VLTLMN--GGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER  306 (576)
T ss_dssp             EECCCC--SCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEcCC--CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999997  357777776533   222    46778889999999753

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=94.64  E-value=0.23  Score=40.56  Aligned_cols=107  Identities=13%  Similarity=0.053  Sum_probs=69.2

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      .++.||.|....||++.+. +| .|+||.-.......    .-...+...|.++|+.+..  |. +.+++.  .+.....
T Consensus        58 ~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~----~~~~~~~~~E~~~l~~l~h--pn-iv~~~~~~~~~~~~~  130 (348)
T 1u5q_A           58 DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS----NEKWQDIIKEVRFLQKLRH--PN-TIQYRGCYLREHTAW  130 (348)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCH----HHHHHHHHHHHHHHHHCCC--TT-BCCEEEEEEETTEEE
T ss_pred             eeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccc----hHHHHHHHHHHHHHHhCCC--CC-EeeEEEEEEECCeEE
Confidence            4678999999999999875 55 79999754321110    0122466778888887742  43 333443  4566778


Q ss_pred             EEEecCCCCchHHHHHHHc--CCCC----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIA--GIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~--g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++ +  .+.+.+..  +...    -.++.+|...|+-+|...
T Consensus       131 lv~e~~~-g--~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  174 (348)
T 1u5q_A          131 LVMEYCL-G--SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN  174 (348)
T ss_dssp             EEEECCS-E--EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecCC-C--CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999997 2  34454432  2222    257788888999999763

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=94.61  E-value=0.34  Score=39.41  Aligned_cols=102  Identities=16%  Similarity=0.066  Sum_probs=67.3

Q ss_pred             eeEeccCCceeEEEEEEeCC------C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhc------------cCC
Q 045250           36 TIKEVGDGNLNFVYIVVGTS------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGK------------LCP   96 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~------------~~p   96 (165)
                      -.+.||.|....||++.+..      + .++||.-...           ......|.++++....            +--
T Consensus        39 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-----------~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h  107 (364)
T 3op5_A           39 VGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSD-----------NGPLFTELKFYQRAAKPEQIQKWIRTRKLKY  107 (364)
T ss_dssp             EEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETT-----------CHHHHHHHHHHHHHCCHHHHHHHHHHTTCSC
T ss_pred             EEEEEecCCCeEEEEeeecCccccccccceEEEEeecc-----------chhHHHHHHHHHhhhhhHHHHHHHHHhhccC
Confidence            46789999999999998753      3 6888864321           1355666666665533            223


Q ss_pred             CCCceEEEEcCC------CceEEEecCCCCchHHHHHHHcC--CCC----HHHHHHHHHHHHHHHhc
Q 045250           97 DHVPEVYHFDRT------MSLIGMRYLEPPHIILRKGLIAG--IKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus        97 ~~vP~v~~~D~e------~~~~vMEdl~~~~~~lr~~l~~g--~~~----~~~a~~iG~~La~~h~~  151 (165)
                      ..+++++.+-.+      ...+|||+++   .+|.+.+...  ...    -.++.+|...|+-+|..
T Consensus       108 ~~iv~~~~~~~~~~~~~~~~~lv~e~~g---~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~  171 (364)
T 3op5_A          108 LGVPKYWGSGLHDKNGKSYRFMIMDRFG---SDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEH  171 (364)
T ss_dssp             CCSCCEEEEEEEEETTEEEEEEEEECEE---EEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCeEEeeeeeccCCcceEEEEEeCCC---CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            456777765433      2689999995   3676766553  222    25788899999999976

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=94.57  E-value=0.2  Score=41.74  Aligned_cols=98  Identities=16%  Similarity=0.070  Sum_probs=66.1

Q ss_pred             EeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE------cCCC
Q 045250           38 KEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF------DRTM  109 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~------D~e~  109 (165)
                      +.||.|....||++.+. +| .+.||.-.    .        ..+...|.+.+...... | ++++++.+      +...
T Consensus        68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~----~--------~~~~~~E~~~~~~~~~h-p-~iv~l~~~~~~~~~~~~~  133 (400)
T 1nxk_A           68 QVLGLGINGKVLQIFNKRTQEKFALKMLQ----D--------CPKARREVELHWRASQC-P-HIVRIVDVYENLYAGRKC  133 (400)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEE----C--------SHHHHHHHHHHHHHTTS-T-TBCCEEEEEEEEETTEEE
T ss_pred             ceeeeccCeEEEEEEECCCCCEEEEEEeC----c--------chhHHHHHHHHHHhcCC-C-CcceEeEEEeecccCCcE
Confidence            57999999999999876 45 79999742    1        14667787777554432 3 34455432      1345


Q ss_pred             ceEEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~  151 (165)
                      ..+||||++  +..|.+.+.+..   ..    -.++.+|...|.-+|..
T Consensus       134 ~~lv~E~~~--gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~  180 (400)
T 1nxk_A          134 LLIVMECLD--GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI  180 (400)
T ss_dssp             EEEEEECCC--SEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEEeCC--CCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            678999998  457777776532   22    25778888888889964

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=94.55  E-value=0.2  Score=40.89  Aligned_cols=110  Identities=14%  Similarity=0.019  Sum_probs=69.2

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCC--------CceEEEE
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDH--------VPEVYHF  105 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~--------vP~v~~~  105 (165)
                      ..+.||.|..-.||++.+. +| .++||.-......    -....++.+.|+.+++.+..--|..        +|.=+..
T Consensus        66 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~  141 (371)
T 3q60_A           66 LVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAEN----SRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA  141 (371)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTT----HHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred             eeeeccCCCCEEEEEEEECCCCceeEEEEEEecccc----cccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence            4678999999999999976 55 7999986643211    1233456778877777776411332        2211222


Q ss_pred             cC-----------------CCceEEEecCCCCchHHHHHHHcC-C---C--C------HHHHHHHHHHHHHHHhcc
Q 045250          106 DR-----------------TMSLIGMRYLEPPHIILRKGLIAG-I---K--Y------PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~-----------------e~~~~vMEdl~~~~~~lr~~l~~g-~---~--~------~~~a~~iG~~La~~h~~t  152 (165)
                      ++                 ....+||||++   .+|.+.+... .   .  .      -.++.+|...|+-+|...
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~---~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~  214 (371)
T 3q60_A          142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS---VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKG  214 (371)
T ss_dssp             ETTSCSSSBCSCC---CCEEEEEEEECCCS---EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCCCCCeeeccCCcccceeeeEEEEecCCC---CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC
Confidence            21                 23689999997   3677776642 1   1  1      245689999999999754

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=94.52  E-value=0.25  Score=40.54  Aligned_cols=102  Identities=18%  Similarity=0.187  Sum_probs=63.6

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-------
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD-------  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-------  106 (165)
                      -++.||.|..-.||++.+. +| .+.||.-..-.+           ....|.++|+.+..  | ++.+++.+-       
T Consensus        11 ~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-----------~~~~E~~il~~l~h--p-nIv~l~~~~~~~~~~~   76 (383)
T 3eb0_A           11 LGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-----------YKNRELDIMKVLDH--V-NIIKLVDYFYTTGDEE   76 (383)
T ss_dssp             EEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-----------SCCHHHHHHTTCCC--T-TBCCEEEEEEEC----
T ss_pred             EEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-----------hHHHHHHHHHHcCC--C-CccchhheeeecCccc
Confidence            5688999999999999875 55 899996532211           11248888876632  3 344444321       


Q ss_pred             ---------------------------------CCCceEEEecCCCC-chHHHHHHHcCCCC-----HHHHHHHHHHHHH
Q 045250          107 ---------------------------------RTMSLIGMRYLEPP-HIILRKGLIAGIKY-----PLLAEHMSEFMAK  147 (165)
Q Consensus       107 ---------------------------------~e~~~~vMEdl~~~-~~~lr~~l~~g~~~-----~~~a~~iG~~La~  147 (165)
                                                       .....+|||+++++ ...++..+..+...     -.++.+|...|+-
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~  156 (383)
T 3eb0_A           77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF  156 (383)
T ss_dssp             ---------------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence                                             11255899999831 12455555555543     2467788888998


Q ss_pred             HHhc
Q 045250          148 TLFY  151 (165)
Q Consensus       148 ~h~~  151 (165)
                      +|..
T Consensus       157 LH~~  160 (383)
T 3eb0_A          157 IHSL  160 (383)
T ss_dssp             HHTT
T ss_pred             HHHC
Confidence            9865

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=94.46  E-value=0.25  Score=42.26  Aligned_cols=104  Identities=14%  Similarity=0.072  Sum_probs=67.6

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-C------
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD-R------  107 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-~------  107 (165)
                      ++.||.|..-.||++.+. +| .|.||.-..-..     ..-...|...|..+|+.+..  |. +.+++.+- .      
T Consensus        67 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~-----~~~~~~~~~~E~~~l~~l~h--pn-Iv~l~~~~~~~~~~~~  138 (464)
T 3ttj_A           67 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-----NQTHAKRAYRELVLMKCVNH--KN-IISLLNVFTPQKTLEE  138 (464)
T ss_dssp             EEEEEECSSCEEEEEEETTTTEEEEEEEEESGGG-----SHHHHHHHHHHHHHHHHCCC--TT-BCCCSEEECSCCSTTT
T ss_pred             EEEeecCCCeEEEEEEECCCCCEEEEEEECcccc-----ChHHHHHHHHHHHHHHhCCC--CC-CCcEEEEEccCCcccc
Confidence            678999999999999876 45 799996542211     12334677788888887742  33 33444332 2      


Q ss_pred             -CCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250          108 -TMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 -e~~~~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                       ....+|||+++.   .+.+.+.. ....    .++.+|...|.-+|...
T Consensus       139 ~~~~~lv~E~~~~---~l~~~~~~-~l~~~~~~~~~~qil~aL~~lH~~~  184 (464)
T 3ttj_A          139 FQDVYLVMELMDA---NLCQVIQM-ELDHERMSYLLYQMLCGIKHLHSAG  184 (464)
T ss_dssp             CCEEEEEEECCSE---EHHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCeEEEEEeCCCC---CHHHHHhh-cCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             223899999982   24444433 2322    47888999999999763

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=94.36  E-value=0.38  Score=43.14  Aligned_cols=106  Identities=20%  Similarity=0.086  Sum_probs=70.5

Q ss_pred             eEeccCCceeEEEEEEeCC----C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCCCce
Q 045250           37 IKEVGDGNLNFVYIVVGTS----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSL  111 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~  111 (165)
                      .+.||.|..-.||++....    + .+.||.......      .-..++...|+.+|+.+..  |..++-.=.+......
T Consensus       395 ~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~H--pnIv~l~~~~~~~~~~  466 (656)
T 2j0j_A          395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS------DSVREKFLQEALTMRQFDH--PHIVKLIGVITENPVW  466 (656)
T ss_dssp             EEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTC------HHHHHHHHHHHHHHHHCCC--TTBCCEEEEECSSSCE
T ss_pred             eeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCC------HHHHHHHHHHHHHHHhCCC--CCCCeEEEEEecCceE
Confidence            4679999999999998642    2 588887653211      1123567778888877642  4444433334556678


Q ss_pred             EEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++  +..|.+.+....  ..    -.++.+|...|+-+|...
T Consensus       467 lv~E~~~--~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g  511 (656)
T 2j0j_A          467 IIMELCT--LGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR  511 (656)
T ss_dssp             EEEECCT--TCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEcCC--CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999998  457877776543  22    256788999999999763

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=93.96  E-value=0.25  Score=41.78  Aligned_cols=101  Identities=17%  Similarity=0.105  Sum_probs=65.5

Q ss_pred             eEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEE
Q 045250           37 IKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~v  113 (165)
                      .+.||.|....|+.....+| .|.||.-.+-..          ++...|.++|+..... |. +.+++.+  |.....+|
T Consensus        29 ~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~----------~~~~~E~~~l~~l~~H-pn-Iv~l~~~~~~~~~~~lv   96 (432)
T 3p23_A           29 KDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF----------SFADREVQLLRESDEH-PN-VIRYFCTEKDRQFQYIA   96 (432)
T ss_dssp             EEEEEECGGGCEEEEEESSSSEEEEEEECTTTE----------EECHHHHHHHHHSCCC-TT-BCCEEEEEEETTEEEEE
T ss_pred             CCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH----------HHHHHHHHHHHhccCC-CC-cCeEEEEEecCCEEEEE
Confidence            45678777665443333445 899997653221          2345788899877543 33 3344433  44456799


Q ss_pred             EecCCCCchHHHHHHHcCCC-----C-HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIAGIK-----Y-PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g~~-----~-~~~a~~iG~~La~~h~~t  152 (165)
                      ||+++  . .|.+.+.....     . -.++.+|...|.-+|...
T Consensus        97 ~E~~~--g-~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  138 (432)
T 3p23_A           97 IELCA--A-TLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLN  138 (432)
T ss_dssp             EECCS--E-EHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTT
T ss_pred             EECCC--C-CHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCc
Confidence            99997  3 78887776542     1 378999999999999763

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=93.90  E-value=0.74  Score=36.47  Aligned_cols=105  Identities=13%  Similarity=0.094  Sum_probs=62.7

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      .++.||.|....||++.+. +| .++||.-.....      .-...+...|...+  ...+--.++++++.  .+.+...
T Consensus        26 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~e~~~~--~~~~~h~niv~~~~~~~~~~~~~   97 (327)
T 3aln_A           26 DLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD------EKEQKQLLMDLDVV--MRSSDCPYIVQFYGALFREGDCW   97 (327)
T ss_dssp             C-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC------HHHHHHHHHHHHHH--HSSCCCTTBCCEEEEEECSSEEE
T ss_pred             ehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC------chHHHHHHHHHHHH--HHcCCCCcEeeeeeEEEeCCceE
Confidence            5677999999999999986 45 799997643211      01112333333322  22222234555554  4667778


Q ss_pred             EEEecCCCCchHHHHHHH------cCCCC----HHHHHHHHHHHHHHHhc
Q 045250          112 IGMRYLEPPHIILRKGLI------AGIKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~------~g~~~----~~~a~~iG~~La~~h~~  151 (165)
                      +|||+++.   .+.+.+.      .+...    -.++.++...|..+|..
T Consensus        98 lv~e~~~~---~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~  144 (327)
T 3aln_A           98 ICMELMST---SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN  144 (327)
T ss_dssp             EEECCCSE---EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeecCC---ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc
Confidence            99999983   4444443      22222    25778888888888875

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=93.75  E-value=0.084  Score=48.16  Aligned_cols=106  Identities=23%  Similarity=0.248  Sum_probs=73.3

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--------
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--------  105 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--------  105 (165)
                      -.+.||.|....||++.+. +| .++||...+...      +-..++...|+++|+.+..  |. +.+++.+        
T Consensus        18 i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~------~~~~~~~~~Ei~iL~~L~H--pn-IV~l~~v~~~~~~~~   88 (676)
T 3qa8_A           18 MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELS------PKNRERWCLEIQIMKKLNH--PN-VVSAREVPDGLQKLA   88 (676)
T ss_dssp             CCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCC------HHHHHHHHHHHHHHHHCCB--TT-BCCEEECCTTTCCCC
T ss_pred             EEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCC------HHHHHHHHHHHHHHHhCCC--CC-CCceeeeeccccccc
Confidence            4567888988999999875 45 899998654221      1234677789999988842  33 3334433        


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcCC----C----CHHHHHHHHHHHHHHHhcc
Q 045250          106 DRTMSLIGMRYLEPPHIILRKGLIAGI----K----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~e~~~~vMEdl~~~~~~lr~~l~~g~----~----~~~~a~~iG~~La~~h~~t  152 (165)
                      +.....+|||+++  +.+|++.+....    .    .-.++.+|...|+-+|...
T Consensus        89 ~~~~~~LVmEy~~--ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g  141 (676)
T 3qa8_A           89 PNDLPLLAMEYCE--GGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR  141 (676)
T ss_dssp             TTSSCCCEEECCS--SCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCeEEEEEEeCC--CCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            2566789999997  357888877632    1    1368889999999999753

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=93.64  E-value=0.3  Score=40.43  Aligned_cols=101  Identities=17%  Similarity=0.055  Sum_probs=60.1

Q ss_pred             EeccCCceeEEEEEEeC---CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE---cCCCc
Q 045250           38 KEVGDGNLNFVYIVVGT---SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF---DRTMS  110 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~---~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~---D~e~~  110 (165)
                      ..||.|....||++...   ++ .++||.-...         -...+...|.++|+.+..  |..+.-.-.+   +....
T Consensus        27 ~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~---------~~~~~~~~E~~~l~~l~h--pniv~~~~~~~~~~~~~~   95 (405)
T 3rgf_A           27 CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT---------GISMSACREIALLRELKH--PNVISLQKVFLSHADRKV   95 (405)
T ss_dssp             CCCC-----EEEEEEESSSSCCCCEEEEECSSS---------SCCHHHHHHHHHHHHCCC--TTBCCCCEEEEETTTTEE
T ss_pred             cEeeecCCeEEEEEEEccCCCCeEEEEEEECCC---------CCCHHHHHHHHHHHhcCC--CCeeeEeeEEecCCCCeE
Confidence            46899999999999854   34 7999976421         112467789999988852  4433322222   34567


Q ss_pred             eEEEecCCCCchHHHHHHHcC----------CCC----HHHHHHHHHHHHHHHhcc
Q 045250          111 LIGMRYLEPPHIILRKGLIAG----------IKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdl~~~~~~lr~~l~~g----------~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .+|||+++.   .|.+.+...          ...    -.++.+|...|+-+|...
T Consensus        96 ~lv~e~~~~---~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~  148 (405)
T 3rgf_A           96 WLLFDYAEH---DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW  148 (405)
T ss_dssp             EEEEECCSE---EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEeCCCC---CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            899999983   343433311          121    257788899999999754

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=93.44  E-value=0.24  Score=39.73  Aligned_cols=104  Identities=13%  Similarity=0.102  Sum_probs=51.3

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCC--
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTM--  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~--  109 (165)
                      -.+.||.|....||++.+. +| .++||.-..     .+   ....|...|.+.|+.   +--.++.+++.+  +...  
T Consensus        27 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~-----~~---~~~~~~~~~~~~l~~---l~h~niv~~~~~~~~~~~~~   95 (360)
T 3e3p_A           27 VERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQ-----DP---RFRNRELQIMQDLAV---LHHPNIVQLQSYFYTLGERD   95 (360)
T ss_dssp             EC----------CEEEEETTTCCEEEEEEEEC-----CT---TCCCHHHHHHHHHHH---HCCTTBCCEEEEEEEECSSC
T ss_pred             EEEEEecCCCeEEEEEEECCCCCEEEEEEEec-----Cc---cccHHHHHHHHHHHh---cCCCCcccHHHhhhcccccc
Confidence            4567999999999999986 45 899996421     11   112344444444443   333344555433  2222  


Q ss_pred             -----ceEEEecCCCCc-hHHHHHHHcCCCC-----HHHHHHHHHHHHHHHh
Q 045250          110 -----SLIGMRYLEPPH-IILRKGLIAGIKY-----PLLAEHMSEFMAKTLF  150 (165)
Q Consensus       110 -----~~~vMEdl~~~~-~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~  150 (165)
                           ..+|||+++.+. ..++..+..+...     -.++.+|...|+-+|.
T Consensus        96 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~  147 (360)
T 3e3p_A           96 RRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHL  147 (360)
T ss_dssp             TTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTS
T ss_pred             ccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhC
Confidence                 568999998311 1233333333332     2467788888888993

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=93.33  E-value=0.5  Score=39.54  Aligned_cols=103  Identities=19%  Similarity=0.175  Sum_probs=62.0

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-c------
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-D------  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D------  106 (165)
                      ..+.||.|..-.||++.+. +| .|.||.-....+           ....|.++|+.+..  |..+.-...| +      
T Consensus        58 ~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-----------~~~~E~~il~~l~h--pniv~l~~~~~~~~~~~~  124 (420)
T 1j1b_A           58 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----------FKNRELQIMRKLDH--CNIVRLRYFFYSSGEKKD  124 (420)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-----------SCCHHHHHHHTCCC--TTBCCEEEEEEEEETTTT
T ss_pred             eeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-----------hHHHHHHHHHHcCC--CCccceeeEEeccCCCCc
Confidence            4577999999999999986 45 799996532111           11248888877642  4333322222 1      


Q ss_pred             CCCceEEEecCCCCc-hHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 045250          107 RTMSLIGMRYLEPPH-IILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~-~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      .....+||||++.+. ..++.....+...     -.++.+|...|+-+|..
T Consensus       125 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~  175 (420)
T 1j1b_A          125 EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF  175 (420)
T ss_dssp             EEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            112458999998311 2233322333332     24678899999999965

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=93.26  E-value=0.47  Score=39.30  Aligned_cols=103  Identities=16%  Similarity=0.100  Sum_probs=62.3

Q ss_pred             eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--CCC---
Q 045250           36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD--RTM---  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--~e~---  109 (165)
                      .++.||.|....||++.+..+ .+++|.....-+.           ...|.++|+.+..  | ++.+++.+-  ...   
T Consensus        44 ~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~-----------~~~E~~il~~l~h--~-niv~l~~~~~~~~~~~~  109 (394)
T 4e7w_A           44 NCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF-----------KNRELQIMRIVKH--P-NVVDLKAFFYSNGDKKD  109 (394)
T ss_dssp             EEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS-----------CCHHHHHHHTCCC--T-TBCCEEEEEEEESSSSS
T ss_pred             EeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch-----------HHHHHHHHHhCCC--C-CcceEEEEEEecCCCCC
Confidence            466789999999999998655 7888865432211           1248888877642  3 344444332  111   


Q ss_pred             ---ceEEEecCCCC-chHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          110 ---SLIGMRYLEPP-HIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ---~~~vMEdl~~~-~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                         ..+||||++.+ ...++.....+...     ..++.+|...|+-+|...
T Consensus       110 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~  161 (394)
T 4e7w_A          110 EVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG  161 (394)
T ss_dssp             CEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence               55899999831 11222222222222     246778899999999753

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=92.59  E-value=0.14  Score=40.46  Aligned_cols=109  Identities=13%  Similarity=-0.029  Sum_probs=70.9

Q ss_pred             Ccc-eeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCC
Q 045250           33 DDL-TIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTM  109 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~  109 (165)
                      +.+ -.+.||.|....||++...+ .++||.-......  +   -..++...|...|+.+..  | ++++++  ..+...
T Consensus        33 ~~~~~~~~lg~G~~g~V~~~~~~~-~~avk~~~~~~~~--~---~~~~~~~~e~~~l~~l~h--~-~iv~~~~~~~~~~~  103 (319)
T 2y4i_B           33 EQLEIGELIGKGRFGQVYHGRWHG-EVAIRLIDIERDN--E---DQLKAFKREVMAYRQTRH--E-NVVLFMGACMSPPH  103 (319)
T ss_dssp             SCEECCCBCCCSSSSEEEEEEESS-SEEEEECCCCSCC--C---CCCCCCCTTGGGGTTCCC--T-TBCCCCEEEECSSC
T ss_pred             HHeEEeeEeccCCceEEEEEEEcC-eEEEEEeecCCCC--H---HHHHHHHHHHHHHhcCCC--C-CEeEEEEEEecCCc
Confidence            344 55778999999999998753 6888876543211  1   122344456666655532  3 333333  346667


Q ss_pred             ceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ..+|||+++  +.+|.+.+....  ..    -.++.+|...|+.+|...
T Consensus       104 ~~iv~e~~~--~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~  150 (319)
T 2y4i_B          104 LAIITSLCK--GRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG  150 (319)
T ss_dssp             EEEECBCCC--SEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEEeeccc--CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            899999997  458888776643  21    267888999999999764

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=92.51  E-value=0.61  Score=37.53  Aligned_cols=103  Identities=15%  Similarity=0.051  Sum_probs=63.8

Q ss_pred             ccee-E-eccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc---
Q 045250           34 DLTI-K-EVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD---  106 (165)
Q Consensus        34 ~~~v-~-~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D---  106 (165)
                      ...+ . .||.|....||++.+. +| .++||.-..            ..+...|...+.....  -.++++++.+-   
T Consensus        29 ~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~------------~~~~~~e~~~~~~~~~--h~~i~~~~~~~~~~   94 (336)
T 3fhr_A           29 DYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYD------------SPKARQEVDHHWQASG--GPHIVCILDVYENM   94 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEES------------SHHHHHHHHHHHHHTT--STTBCCEEEEEEEE
T ss_pred             eeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecC------------cHHHHHHHHHHHHhcC--CCChHHHHHHHhhc
Confidence            4555 3 5899999999999987 45 899997421            1233334333222222  23344444432   


Q ss_pred             ---CCCceEEEecCCCCchHHHHHHHcCC--CC-----HHHHHHHHHHHHHHHhcc
Q 045250          107 ---RTMSLIGMRYLEPPHIILRKGLIAGI--KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ---~e~~~~vMEdl~~~~~~lr~~l~~g~--~~-----~~~a~~iG~~La~~h~~t  152 (165)
                         .....+|||+++  +..|.+.+.+..  .+     -.++.+|...|.-+|...
T Consensus        95 ~~~~~~~~lv~e~~~--gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~  148 (336)
T 3fhr_A           95 HHGKRCLLIIMECME--GGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN  148 (336)
T ss_dssp             ETTEEEEEEEEECCT--TEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCCCceEEEEEeccC--CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence               223679999998  457878777642  22     257788888899998753

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=92.26  E-value=0.41  Score=38.61  Aligned_cols=102  Identities=19%  Similarity=0.161  Sum_probs=59.2

Q ss_pred             eeEeccCCceeEEEEEEeCC----C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHh------------hccCCCC
Q 045250           36 TIKEVGDGNLNFVYIVVGTS----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEH------------GKLCPDH   98 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~------------~~~~p~~   98 (165)
                      -.+.||.|....||++.+..    + .++||.....-           .....|.++++..            ..+--..
T Consensus        41 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~-----------~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~n  109 (345)
T 2v62_A           41 LGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQEN-----------GPLFSELKFYQRVAKKDCIKKWIERKQLDYLG  109 (345)
T ss_dssp             EEEEC------CEEEEEESSSCGGGCCEEEEEEECC------------CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCC
T ss_pred             EEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCC-----------cchHHHHHHHHHHhhhHHHHHHHhhccccccC
Confidence            46789999999999999863    3 78888765321           1222333333322            1222345


Q ss_pred             CceEEEEc------CCCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 045250           99 VPEVYHFD------RTMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus        99 vP~v~~~D------~e~~~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      +++++.+.      .....+|||+++   .+|.+.+.....+     -.++.+|...|+-+|..
T Consensus       110 i~~~~~~~~~~~~~~~~~~lv~e~~~---~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~  170 (345)
T 2v62_A          110 IPLFYGSGLTEFKGRSYRFMVMERLG---IDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHEN  170 (345)
T ss_dssp             CCCEEEEEEEESSSCEEEEEEEECEE---EEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cceeecccccccCCCcEEEEEEeccC---CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            66666653      456789999995   3677766544322     25788889999999975

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	165
d2pula1	392	d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {	3e-36
d1nw1a_	395	d.144.1.8 (A:) Choline kinase {Caenorhabditis eleg	2e-04

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} Length = 392

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

 Score =  127 bits (319), Expect = 3e-36
 Identities = 60/161 (37%), Positives = 88/161 (54%), Gaps = 8/161 (4%)

Query: 6   FRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSG--SFVIKQA 63
           +  L++ S +          SK       LT +E+GDGNLN+V+ +       + +IKQA
Sbjct: 5   YETLNESSAVALAVKLGLFPSK-----STLTCQEIGDGNLNYVFHIYDQEHDRALIIKQA 59

Query: 64  LPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPPHII 123
           +PY + +GESWP+T +RA  E+ AL   G+  P  VP V++ D  M++  M  L     I
Sbjct: 60  VPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDTEMAVTVMEDLS-HLKI 118

Query: 124 LRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTEHKR 164
            RKGLI G  YP L++H+ EF+ KTLFY+S         K+
Sbjct: 119 ARKGLIEGENYPHLSQHIGEFLGKTLFYSSDYALEPKVKKQ 159

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} Length = 395

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 38.3 bits (88), Expect = 2e-04
 Identities = 17/122 (13%), Positives = 39/122 (31%), Gaps = 15/122 (12%)

Query: 33  DDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYV--RCIGESWP---MTKERAYFEALA 87
           + L I  +  G  N +++   +     I+     V  R          +  E   F  L+
Sbjct: 43  EHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLS 102

Query: 88  LKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAK 147
             E         P++Y       L    Y+    +   +  +A +    +A+ +++    
Sbjct: 103 --ERHL-----GPKLYGIFSGGRL--EEYIPSRPLSCHEISLAHM-STKIAKRVAKVHQL 152

Query: 148 TL 149
            +
Sbjct: 153 EV 154

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	165
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	100.0
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	99.0
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	98.83
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	98.66
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	98.55
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	97.86
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	97.62
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	97.6
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	97.26
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	97.19
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	97.19
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	97.18
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	97.16
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	97.16
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	97.16
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	97.13
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	97.08
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	97.02
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	96.99
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	96.95
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	96.94
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	96.91
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	96.91
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	96.91
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	96.9
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	96.9
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	96.89
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	96.83
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	96.78
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	96.78
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	96.72
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	96.72
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	96.69
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	96.67
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	96.67
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	96.63
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	96.6
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	96.58
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	96.45
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	96.43
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	96.42
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	96.34
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	96.31
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	96.2
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	96.19
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	96.14
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	96.1
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	96.09
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	96.08
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	96.02
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	95.98
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	95.91
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	95.83
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	95.76
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	95.64
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	95.51
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	95.47
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	95.41
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	95.31
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	95.23
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	95.23
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	95.19
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	95.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	94.88
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	94.65
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	94.55
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	93.95
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	93.85
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	92.47

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=100.00  E-value=4.6e-34  Score=242.86  Aligned_cols=154  Identities=38%  Similarity=0.626  Sum_probs=138.3

Q ss_pred             CCccccCHhhHHHHHHhCCCcccccCCCCCcceeEeccCCceeEEEEEEeCCC--eEEEEecCccccccCCCCCCChHHH
Q 045250            4 TEFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSG--SFVIKQALPYVRCIGESWPMTKERA   81 (165)
Q Consensus         4 ~~~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~g--svIvKqa~p~~r~~~~~~~l~~~R~   81 (165)
                      +.|++||++.++++....|.++     +.+.++++++||||+|+||||++.+|  ++|||||+||+|+.|++|+++.+|+
T Consensus         3 ~~~e~Lt~~~~~~la~~lg~~~-----~~~~l~~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~   77 (392)
T d2pula1           3 PLYETLNESSAVALAVKLGLFP-----SKSTLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRA   77 (392)
T ss_dssp             CCCCCCCHHHHHHHHHHTTC----------CCEEEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHH
T ss_pred             CCCccCCHHHHHHHHHHcCCCC-----CCCCeeEEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHH
Confidence            5799999999999999888664     56789999999999999999998754  9999999999999888999999999


Q ss_pred             HHHHHHHHHhhccCCCCCceEEEEcCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccCchh
Q 045250           82 YFEALALKEHGKLCPDHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRTTTE  161 (165)
Q Consensus        82 ~~E~~~L~~~~~~~p~~vP~v~~~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~~~~  161 (165)
                      ++|+++|+.+++.+|..||++|+||++++++|||||+ ++..|+..+.++...+.+++++|++||++|+.+++++++...
T Consensus        78 ~~E~~~L~~~~~~~p~~vP~v~~~d~~~~~lvmE~L~-~~~~~~~~l~~~~~~~~~a~~lg~~La~~h~~~~~~~~~~~~  156 (392)
T d2pula1          78 RIESSALIRQGEHVPHLVPRVFYSDTEMAVTVMEDLS-HLKIARKGLIEGENYPHLSQHIGEFLGKTLFYSSDYALEPKV  156 (392)
T ss_dssp             HHHHHHHHHHHTTCGGGSCCEEEEETTTTEEEECCCT-TSEEHHHHHHHTCCCTTHHHHHHHHHHHHHHHTSTTTSCHHH
T ss_pred             HHHHHHHHHhhhhCCCCcceEEEEcCCCCEEEEeccC-CcccchhhhcccchhHHHHHHHHHHHHHHHHHhccccccchh
Confidence            9999999999999999999999999999999999999 789999999999999999999999999999999999999887


Q ss_pred             hh
Q 045250          162 HK  163 (165)
Q Consensus       162 kk  163 (165)
                      ++
T Consensus       157 ~~  158 (392)
T d2pula1         157 KK  158 (392)
T ss_dssp             HH
T ss_pred             hc
Confidence            75

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=99.00  E-value=1.1e-09  Score=84.64  Aligned_cols=109  Identities=17%  Similarity=0.079  Sum_probs=81.8

Q ss_pred             cceeEeccCCce-eEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--CCCc
Q 045250           34 DLTIKEVGDGNL-NFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD--RTMS  110 (165)
Q Consensus        34 ~~~v~~l~~Gn~-N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--~e~~  110 (165)
                      .+.+...+.|.+ |-||||+..+++++||...+..+       .+..+...|+.+|+.+++.+|  ||+++.++  +...
T Consensus        15 ~~~~~~~~~G~s~~~v~rv~~~~~~~vlk~~~~~~~-------~~~~~~~~E~~~l~~l~~~vp--vP~vl~~~~~~~~~   85 (263)
T d1j7la_          15 KYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYK-------GTTYDVEREKDMMLWLEGKLP--VPKVLHFERHDGWS   85 (263)
T ss_dssp             TSEEEECSCCCSSSEEEEEECSSCEEEEEEECGGGT-------TSTTCHHHHHHHHHHHTTTSC--CCCEEEEEEETTEE
T ss_pred             ceEEEEcCCCCCCCcEEEEEeCCCeEEEEEcCCCcc-------cchhhHHHHHHHHHHHhccCC--CCcEEEEEecCCce
Confidence            455666665655 58999998777999997764433       334467789999998877544  89999874  4557


Q ss_pred             eEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccc
Q 045250          111 LIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTS  153 (165)
Q Consensus       111 ~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~ts  153 (165)
                      .+|||+++  +.++.+..........+++++|++|+++|..+.
T Consensus        86 ~lv~~~l~--G~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~  126 (263)
T d1j7la_          86 NLLMSEAD--GVLCSEEYEDEQSPEKIIELYAECIRLFHSIDI  126 (263)
T ss_dssp             EEEEECCS--SEEHHHHTTTCSCHHHHHHHHHHHHHHHHTSCC
T ss_pred             EEEEEecc--cccccccccccccHHHHHHHHHHHHHHHhccCc
Confidence            89999998  567777666655557899999999999998754

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.83  E-value=3.3e-09  Score=87.95  Aligned_cols=113  Identities=12%  Similarity=0.068  Sum_probs=83.4

Q ss_pred             CCCcceeEeccCCceeEEEEEEeCCCeEEEEecCcc--ccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC
Q 045250           31 KFDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPY--VRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRT  108 (165)
Q Consensus        31 ~~~~~~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~--~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e  108 (165)
                      +.+.+++++++||..|.+|+|+..+++.++|.....  +|+.|... .-.+ ...|.++++.+++.  +.+|++|++|+ 
T Consensus        41 ~~~~l~v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~~-~~id-r~~E~~i~~~ls~~--gl~Pkll~~~~-  115 (395)
T d1nw1a_          41 PLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE-TESH-LVAESVIFTLLSER--HLGPKLYGIFS-  115 (395)
T ss_dssp             CGGGEEEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC-CHHH-HHHHHHHHHHHHHT--TSSSCEEEEET-
T ss_pred             CccceEEEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCcc-hhhH-HHHHHHHHHHHHhC--CCCCeEEEEcC-
Confidence            457899999999999999999988765555555543  37755322 2233 45799999999884  56999999997 


Q ss_pred             CceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccc
Q 045250          109 MSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSL  154 (165)
Q Consensus       109 ~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd  154 (165)
                       ..+|||++.  +..+..   ..-..|.+...++..||++|.....
T Consensus       116 -~g~I~efi~--g~~l~~---~d~~~~~~~~~iA~~La~lH~~~~~  155 (395)
T d1nw1a_         116 -GGRLEEYIP--SRPLSC---HEISLAHMSTKIAKRVAKVHQLEVP  155 (395)
T ss_dssp             -TEEEECCCC--EEECCT---TGGGSHHHHHHHHHHHHHHTTCCCS
T ss_pred             -CceEEEEec--cccCCh---hhccchhhhHHHHHHHHHHhhcccc
Confidence             478999997  334432   1123478999999999999986544

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=98.66  E-value=6.1e-08  Score=74.17  Aligned_cols=103  Identities=11%  Similarity=-0.017  Sum_probs=76.9

Q ss_pred             cceeEeccCCcee-EEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCC
Q 045250           34 DLTIKEVGDGNLN-FVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTM  109 (165)
Q Consensus        34 ~~~v~~l~~Gn~N-~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~  109 (165)
                      ...++++++|-+| -||||++.+| +++||...+.-.          .+...|+++|+.++.. +..||+++.+  |+..
T Consensus        12 g~~~~~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~~----------~~l~~E~~~l~~L~~~-gvpvP~v~~~~~~~~~   80 (255)
T d1nd4a_          12 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGAL----------NELQDEAARLSWLATT-GVPCAAVLDVVTEAGR   80 (255)
T ss_dssp             TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCTT----------SCHHHHHHHHHHHHTT-TCCBCCEEEEEECSSC
T ss_pred             CCceEEcCCcccCCeEEEEEeCCCCEEEEEeCCccCH----------hHHHHHHHHHHHHHhc-CCCCCceeeecccccc
Confidence            3577888998875 6899999877 799998764321          3568899999988774 5569999986  5566


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                      ..++||+++  +..+.+   .....+..++++|..|+++|...
T Consensus        81 ~~~v~~~i~--G~~~~~---~~~~~~~~~~~l~~~la~LH~~~  118 (255)
T d1nd4a_          81 DWLLLGEVP--GQDLLS---SHLAPAEKVSIMADAMRRLHTLD  118 (255)
T ss_dssp             EEEEEECCS--SEETTT---SCCCHHHHHHHHHHHHHHHTTSC
T ss_pred             eEEEEEeee--cccccc---ccccHHHHHHHHHHHHHHHccCC
Confidence            789999997  334322   12223578899999999999765

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=98.55  E-value=4.4e-07  Score=73.00  Aligned_cols=127  Identities=12%  Similarity=0.054  Sum_probs=89.5

Q ss_pred             CccccCHhhHHHHHHhCCCcccccCCCCCcceeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHH
Q 045250            5 EFRPLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYF   83 (165)
Q Consensus         5 ~~~~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~   83 (165)
                      .|..||++.|.+-|.+.|+.+      .  ..+.++ +|.-|.||+|++.+| .+|+|.-+|-.+        +.+-...
T Consensus         4 ~f~~L~pd~i~~al~~~g~~~------~--~~~~~L-~s~EN~vy~v~~~dg~~~VlK~~rp~~~--------s~~~i~~   66 (325)
T d1zyla1           4 TFQTLHPDTIMDALFEHGIRV------D--SGLTPL-NSYENRVYQFQDEDRRRFVVKFYRPERW--------TADQILE   66 (325)
T ss_dssp             CCCCCCHHHHHHHHHHTTCCC------C--SCCEEE-CCSSSEEEEECCTTCCCEEEEEECTTTS--------CHHHHHH
T ss_pred             CccccCHHHHHHHHHHcCCCC------C--cCcccc-ccccceeEEEEcCCCCEEEEEEeCCCCC--------CHHHHHH
Confidence            789999999999999887532      2  234555 467799999999988 799998775432        2345677


Q ss_pred             HHHHHHHhhcc-CCCCCceEEEEcC-------CCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhccccc
Q 045250           84 EALALKEHGKL-CPDHVPEVYHFDR-------TMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLL  155 (165)
Q Consensus        84 E~~~L~~~~~~-~p~~vP~v~~~D~-------e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~  155 (165)
                      |.++|..+.+. +|...|  +..+.       .....++++++ +. .+      ....+..++++|+.||++|..+.++
T Consensus        67 E~~~l~~L~~~gipv~~p--~~~~g~~~~~~~~~~~~l~~~~~-G~-~~------~~~~~~~~~~lG~~LA~lH~~~~~~  136 (325)
T d1zyla1          67 EHQFALQLVNDEVPVAAP--VAFNGQTLLNHQGFYFAVFPSVG-GR-QF------EADNIDQMEAVGRYLGRMHQTGRKQ  136 (325)
T ss_dssp             HHHHHHHHHHTTCSBCCC--CCBTTBSCEEETTEEEEEEECCC-CE-EC------CSSCHHHHHHHHHHHHHHHHHHTSS
T ss_pred             HHHHHHHHHhcCCCCCCc--eecCCCeeeeeeeEEEEEEeecC-Cc-CC------CCCCHHHHHHHHHHHHHHHhhcccC
Confidence            88899888764 343333  22233       33567888888 32 22      2235788999999999999998876


Q ss_pred             ccC
Q 045250          156 YRT  158 (165)
Q Consensus       156 ~l~  158 (165)
                      -.+
T Consensus       137 ~~~  139 (325)
T d1zyla1         137 LFI  139 (325)
T ss_dssp             CCS
T ss_pred             Ccc
Confidence            443

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.86  E-value=1.7e-05  Score=62.43  Aligned_cols=127  Identities=9%  Similarity=0.004  Sum_probs=82.7

Q ss_pred             ccCHhhHHHHHHhCCCcccccCCCCCcceeEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHH
Q 045250            8 PLDDKSLLEYIKATPSLSSKIGNKFDDLTIKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALA   87 (165)
Q Consensus         8 ~l~~~~v~~Yl~~~~~~~~~~~~~~~~~~v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~   87 (165)
                      .||++++..+|+.-++        .+-.+++.+++|..|..|+|++++|+.|+|.-.+.         .+.+...+|.++
T Consensus         2 ~ls~~el~~~l~~Y~l--------g~~~~~~~i~~G~~N~ny~v~t~~g~yVLri~~~~---------~~~~~l~~~~~~   64 (316)
T d2ppqa1           2 DITEDELRNFLTQYDV--------GSLTSYKGIAEGVENSNFLLHTTKDPLILTLYEKR---------VEKNDLPFFLGL   64 (316)
T ss_dssp             CCCHHHHHHHHTTBCC--------CCEEEEEEECC---EEEEEEEESSCCEEEEEECC------------CCHHHHHHHH
T ss_pred             CCCHHHHHHHHHhCCC--------CCceEeecCCCCcccCeEEEEECCCcEEEEEcCCC---------CCHHHHHHHHHH
Confidence            5899999999975321        23458999999999999999999889999974432         123566778888


Q ss_pred             HHHhhcc-CCCCCceEEEEcCCCc--------eEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcccccccC
Q 045250           88 LKEHGKL-CPDHVPEVYHFDRTMS--------LIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYTSLLYRT  158 (165)
Q Consensus        88 L~~~~~~-~p~~vP~v~~~D~e~~--------~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~tsd~~l~  158 (165)
                      |..+.+. +|.  |.+...-....        ..++..+.. .       ..+......+..+|.++|++|..+.++..+
T Consensus        65 l~~L~~~g~pv--p~pi~~~~g~~~~~~~~~~~~~~~~~~g-~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  134 (316)
T d2ppqa1          65 MQHLAAKGLSC--PLPLPRKDGELLGELSGRPAALISFLEG-M-------WLRKPEAKHCREVGKALAAMHLASEGFEIK  134 (316)
T ss_dssp             HHHHHHTTCCC--CCBCCBTTCCSCEEETTEEEEEEECCCC-B-------CCSSCCHHHHHHHHHHHHHHHHHTTTCCCC
T ss_pred             HHhhhhccccc--cccceecCCCcceeeecccceeeeeccc-c-------cccccchhHHHHHHHHHHhhhhhhhhcccc
Confidence            8888774 333  33322222222        334444441 1       112345788999999999999999998776


Q ss_pred             chh
Q 045250          159 TTE  161 (165)
Q Consensus       159 ~~~  161 (165)
                      ...
T Consensus       135 ~~~  137 (316)
T d2ppqa1         135 RPN  137 (316)
T ss_dssp             CBC
T ss_pred             ccc
Confidence            543

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.62  E-value=0.00062  Score=53.62  Aligned_cols=127  Identities=17%  Similarity=0.221  Sum_probs=86.0

Q ss_pred             CHhhHHHHHHhCCCcccccCCCCCcc-eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHH
Q 045250           10 DDKSLLEYIKATPSLSSKIGNKFDDL-TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEAL   86 (165)
Q Consensus        10 ~~~~v~~Yl~~~~~~~~~~~~~~~~~-~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~   86 (165)
                      +++++.+-|++.-.    .+.+.... -++.||.|..-.||++.+. +| .+.||.-..  .  .   .-..++...|++
T Consensus         1 sd~~~~~~l~~~~~----~~dp~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~--~--~---~~~~~~~~~E~~   69 (293)
T d1yhwa1           1 SDEEILEKLRSIVS----VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNL--Q--Q---QPKKELIINEIL   69 (293)
T ss_dssp             CHHHHHHHHHHHSB----SSCTTTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEG--G--G---CSCHHHHHHHHH
T ss_pred             ChHHHHHHHhccCC----CCCcccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEec--c--c---ChHHHHHHHHHH
Confidence            45667777775311    12223344 5788999999999999875 56 799997431  1  1   123578889999


Q ss_pred             HHHHhhccCCCCCceEEE--EcCCCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhcc
Q 045250           87 ALKEHGKLCPDHVPEVYH--FDRTMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus        87 ~L~~~~~~~p~~vP~v~~--~D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      +|+.+.-  | ++.++|.  .+.+...+||||++  +..|.+.+.++...+    .++.+|...|.-+|...
T Consensus        70 il~~l~H--p-nIv~~~~~~~~~~~~~ivmEy~~--gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  136 (293)
T d1yhwa1          70 VMRENKN--P-NIVNYLDSYLVGDELWVVMEYLA--GGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ  136 (293)
T ss_dssp             HHHHCCC--T-TBCCEEEEEEETTEEEEEEECCT--TCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHhCCC--C-CEeeEeEEEEECCEEEEEEEecC--CCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9987743  4 3445553  46677789999998  346777777666543    57778888888888653

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=0.00034  Score=54.66  Aligned_cols=110  Identities=15%  Similarity=0.044  Sum_probs=77.0

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      -.+.||.|..-.||++... +| .+.||.-...... ........++...|+.+|+.+.-  | ++.++|  +.|+....
T Consensus        14 ~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~-~~~~~~~~~~~~~E~~il~~l~H--p-nIv~~~~~~~~~~~~~   89 (293)
T d1jksa_          14 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTK-SSRRGVSREDIEREVSILKEIQH--P-NVITLHEVYENKTDVI   89 (293)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSST-TCSSSBCHHHHHHHHHHHHHCCC--T-TBCCEEEEEECSSEEE
T ss_pred             EeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcc-hhhhhHHHHHHHHHHHHHHhCCC--C-CCCcEEEEEEECCEEE
Confidence            3578999999999999975 56 7889964322211 23345567788899999988852  4 344555  35666678


Q ss_pred             EEEecCCCCchHHHHHHHcCCC-CH----HHHHHHHHHHHHHHhc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIK-YP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~-~~----~~a~~iG~~La~~h~~  151 (165)
                      +||||++  +.+|.+.+.+... ..    .++.+|...|.-+|..
T Consensus        90 iv~E~~~--gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~  132 (293)
T d1jksa_          90 LILELVA--GGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL  132 (293)
T ss_dssp             EEEECCC--SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEcCC--CccccchhccccccchhHHHHHHHHHHHHHHhhhhc
Confidence            9999998  3578777766443 22    4677888888888854

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.26  E-value=0.0029  Score=48.41  Aligned_cols=104  Identities=18%  Similarity=0.168  Sum_probs=76.2

Q ss_pred             eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~  112 (165)
                      -++.||.|..--||++...++ .|.||.=.    .    -....++...|+++|+.+.-  | ++-++|.+  +.+...+
T Consensus         9 ~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~----~----~~~~~~~~~~E~~~l~~l~H--p-nIv~~~g~~~~~~~~~l   77 (263)
T d1sm2a_           9 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIR----E----GAMSEEDFIEEAEVMMKLSH--P-KLVQLYGVCLEQAPICL   77 (263)
T ss_dssp             EEEEEECCSSCCEEEEEETTTEEEEEEECC----S----SSSCHHHHHHHHHHHHHCCC--T-TBCCEEEEECSSSSCEE
T ss_pred             EEEEEeeCCCeEEEEEEECCCCEEEEEEEC----C----CcCcHHHHHHHHHHHHhcCC--C-CcccccceeccCCceEE
Confidence            457899999999999998777 78899632    1    12455778889999988752  3 44556654  5677889


Q ss_pred             EEecCCCCchHHHHHHHcCC-CC-H----HHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGI-KY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~-~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      ||||++  ..+|.+.+.... .+ .    .++.+|+..|.-+|...
T Consensus        78 v~E~~~--~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~  121 (263)
T d1sm2a_          78 VFEFME--HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC  121 (263)
T ss_dssp             EEECCT--TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecC--CCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccc
Confidence            999998  457888776643 22 2    48889999999998754

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.19  E-value=0.00081  Score=51.81  Aligned_cols=108  Identities=16%  Similarity=0.090  Sum_probs=69.4

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-CCC---
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD-RTM---  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-~e~---  109 (165)
                      -.+.||.|..-.||++.+. +| .+.||.-..-... .   +-...|...|.++|+.+..  |. +.+++.+- .+.   
T Consensus        11 i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~-~---~~~~~~~~~E~~~l~~~~h--pn-iv~~~~~~~~~~~~~   83 (277)
T d1o6ya_          11 LGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLAR-D---PSFYLRFRREAQNAAALNH--PA-IVAVYDTGEAETPAG   83 (277)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTT-C---HHHHHHHHHHHHHHHTCCC--TT-BCCEEEEEEEECSSS
T ss_pred             EeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhcc-C---HHHHHHHHHHHHHHHhcCC--CC-CCcccceeeeccCCC
Confidence            3577999999999999875 56 7999984422110 0   1123466778888866432  44 44444332 111   


Q ss_pred             --ceEEEecCCCCchHHHHHHHcCC-CCH----HHHHHHHHHHHHHHhcc
Q 045250          110 --SLIGMRYLEPPHIILRKGLIAGI-KYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 --~~~vMEdl~~~~~~lr~~l~~g~-~~~----~~a~~iG~~La~~h~~t  152 (165)
                        ..+||||++  +..|.+.+..+. ..+    .++.+|...|.-+|...
T Consensus        84 ~~~~lvmE~~~--g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~  131 (277)
T d1o6ya_          84 PLPYIVMEYVD--GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG  131 (277)
T ss_dssp             EEEEEEEECCC--EEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ceEEEEEECCC--CCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence              459999998  457777776654 333    57788899999999753

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.19  E-value=0.0012  Score=50.91  Aligned_cols=107  Identities=12%  Similarity=0.066  Sum_probs=73.1

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~  112 (165)
                      .+.||.|..-.||++.+. +| .+.||.-...... ..   -...+...|.++|+.+..  |. +.++|.  .|+....+
T Consensus        11 ~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~-~~---~~~~~~~~E~~il~~l~h--pn-Iv~~~~~~~~~~~~~i   83 (263)
T d2j4za1          11 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KA---GVEHQLRREVEIQSHLRH--PN-ILRLYGYFHDATRVYL   83 (263)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-HT---TCHHHHHHHHHHHHTCCC--TT-BCCEEEEEECSSEEEE
T ss_pred             EEEEecCCCcEEEEEEECCCCcEEEEEEEchHHcc-Ch---HHHHHHHHHHHHHHhcCC--CC-CCeEEEEEEECCEEEE
Confidence            567999999999999986 45 7889975432211 11   235677889888887742  44 444443  45556679


Q ss_pred             EEecCCCCchHHHHHHHcCC-CCH----HHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGI-KYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~-~~~----~~a~~iG~~La~~h~~t  152 (165)
                      ||||++  +.+|.+.+.... ..+    .++.+|...|+-+|...
T Consensus        84 vmEy~~--~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~  126 (263)
T d2j4za1          84 ILEYAP--LGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR  126 (263)
T ss_dssp             EEECCT--TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEeecC--CCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999998  346777776643 333    46888899999999753

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.18  E-value=0.0011  Score=48.32  Aligned_cols=106  Identities=18%  Similarity=0.118  Sum_probs=64.6

Q ss_pred             EeccCCceeEEEEEEeCCC-eEEEEecCccccccC-----CCCC------CChHHHHHHHHHHHHhhccCCCCCceEEEE
Q 045250           38 KEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIG-----ESWP------MTKERAYFEALALKEHGKLCPDHVPEVYHF  105 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~-----~~~~------l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~  105 (165)
                      ..||.|..-.||++.+.+| .+.||--.+-.....     ..+.      +.......|.+.|..+..   ..+|+.|.+
T Consensus         6 ~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~v~~~~~~   82 (191)
T d1zara2           6 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG---LAVPKVYAW   82 (191)
T ss_dssp             EEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT---SSSCCEEEE
T ss_pred             CEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccC---CCcceEEEe
Confidence            5688888889999998877 899996433211100     0000      111222345556655433   357887755


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHhcc
Q 045250          106 DRTMSLIGMRYLEPPHIILRKGLIAGIKYPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~e~~~~vMEdl~~~~~~lr~~l~~g~~~~~~a~~iG~~La~~h~~t  152 (165)
                        +.++++||+++.  ..+++ + .......++.++...|+.+|...
T Consensus        83 --~~~~lvme~~~~--~~~~~-l-~~~~~~~i~~ql~~~l~~lH~~g  123 (191)
T d1zara2          83 --EGNAVLMELIDA--KELYR-V-RVENPDEVLDMILEEVAKFYHRG  123 (191)
T ss_dssp             --ETTEEEEECCCC--EEGGG-C-CCSCHHHHHHHHHHHHHHHHHTT
T ss_pred             --cCCEEEEEeecc--ccccc-h-hhHHHHHHHHHHHHHHHHHhhCC
Confidence              457899999983  33333 1 12233579999999999999754

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.16  E-value=0.00098  Score=51.78  Aligned_cols=110  Identities=20%  Similarity=0.074  Sum_probs=73.7

Q ss_pred             CcceeE--eccCCceeEEEEEEeCC---C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EE
Q 045250           33 DDLTIK--EVGDGNLNFVYIVVGTS---G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY-HF  105 (165)
Q Consensus        33 ~~~~v~--~l~~Gn~N~v~rV~~~~---g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~  105 (165)
                      ..++++  +||.|..--||++...+   + .|.||.-.....  .   +-..++...|+++|+.+.  -|..| ++| .+
T Consensus         6 ~~~~le~k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~--~---~~~~~~~~~E~~il~~l~--HpnIv-~~~g~~   77 (277)
T d1xbba_           6 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN--D---PALKDELLAEANVMQQLD--NPYIV-RMIGIC   77 (277)
T ss_dssp             GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC----------CHHHHHHHHHHHHHHTCC--CTTBC-CEEEEE
T ss_pred             hhCeecCCCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhC--C---HHHHHHHHHHHHHHHhCC--CCCCc-eEEEEe
Confidence            344555  59999999999997532   2 577887432211  1   223467888999998774  25444 444 34


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          106 DRTMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~e~~~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +.+...+||||++  +.+|.+.+.+....     -.++.+|+..|.-+|...
T Consensus        78 ~~~~~~lvmE~~~--~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~  127 (277)
T d1xbba_          78 EAESWMLVMEMAE--LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN  127 (277)
T ss_dssp             ESSSEEEEEECCT--TEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccCCEEEEEEcCC--CCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCC
Confidence            5567789999998  45788877765533     257889999999999753

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.16  E-value=0.0024  Score=49.81  Aligned_cols=111  Identities=21%  Similarity=0.068  Sum_probs=74.5

Q ss_pred             CCCcceeE--eccCCceeEEEEEEeC---CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE
Q 045250           31 KFDDLTIK--EVGDGNLNFVYIVVGT---SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH  104 (165)
Q Consensus        31 ~~~~~~v~--~l~~Gn~N~v~rV~~~---~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~  104 (165)
                      ..+++.+.  +||.|..--||++...   ++ .|.||.-.+...      .-..++...|+++|+.+.  -|. +.++|.
T Consensus         6 ~~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~------~~~~~~~~~E~~il~~l~--Hpn-Iv~l~g   76 (285)
T d1u59a_           6 KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE------KADTEEMMREAQIMHQLD--NPY-IVRLIG   76 (285)
T ss_dssp             CGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCC------HHHHHHHHHHHHHHHHCC--CTT-BCCEEE
T ss_pred             cccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcC------HHHHHHHHHHHHHHHhCC--CCC-EeeEee
Confidence            34556555  5899999999999653   33 577887543221      123467888999998874  244 444554


Q ss_pred             E-cCCCceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250          105 F-DRTMSLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       105 ~-D~e~~~~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      + ..+...+||||++  +.+|.+.+...+  ..    -.++.+|+..|+-+|...
T Consensus        77 ~~~~~~~~lvmE~~~--~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~  129 (285)
T d1u59a_          77 VCQAEALMLVMEMAG--GGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN  129 (285)
T ss_dssp             EEESSSEEEEEECCT--TEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eeccCeEEEEEEeCC--CCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3 4456679999998  457888765432  22    257889999999999743

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.16  E-value=0.0029  Score=49.10  Aligned_cols=114  Identities=11%  Similarity=-0.008  Sum_probs=72.6

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCcccccc--CCCCCCChHHHHHHHHHHHHhhccCCCCCce-EEEEcCCCc
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCI--GESWPMTKERAYFEALALKEHGKLCPDHVPE-VYHFDRTMS  110 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~--~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~-v~~~D~e~~  110 (165)
                      -.+.||.|....||++... +| .+.||.-.......  ..+..--.+|...|+.+|+.+... |..+.- -++.|.+..
T Consensus         7 ~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h-pnIv~~~~~~~~~~~~   85 (277)
T d1phka_           7 PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH-PNIIQLKDTYETNTFF   85 (277)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTC-TTBCCEEEEEECSSEE
T ss_pred             EceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEEeecccCcce
Confidence            3678999999999999875 55 67788732211000  000011124677899999888764 332221 234466677


Q ss_pred             eEEEecCCCCchHHHHHHHc-CCCCH----HHHHHHHHHHHHHHhcc
Q 045250          111 LIGMRYLEPPHIILRKGLIA-GIKYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdl~~~~~~lr~~l~~-g~~~~----~~a~~iG~~La~~h~~t  152 (165)
                      .+||||++  +.+|.+.|.. |...+    .++.+|...|.-+|...
T Consensus        86 ~ivmE~~~--~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~  130 (277)
T d1phka_          86 FLVFDLMK--KGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN  130 (277)
T ss_dssp             EEEEECCT--TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEcCC--CchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence            89999997  3478777754 33333    46778888888899764

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.13  E-value=0.0029  Score=48.91  Aligned_cols=103  Identities=17%  Similarity=0.188  Sum_probs=68.6

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceE--EEEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEV--YHFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v--~~~D~e~~~  111 (165)
                      -.+.||.|..-.||++.+. +| .|.||.-..      .   ....+...|.++|+.+..  +..++.+  +..+.+...
T Consensus        11 l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~------~---~~~~~~~~E~~i~~~l~~--~~~i~~~~~~~~~~~~~~   79 (299)
T d1ckia_          11 LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECV------K---TKHPQLHIESKIYKMMQG--GVGIPTIRWCGAEGDYNV   79 (299)
T ss_dssp             EEEEEEECSSSEEEEEEETTTTEEEEEEEEES------C---TTSCCHHHHHHHHHHSTT--STTCCCEEEEEEETTEEE
T ss_pred             EeEEEeeCCCcEEEEEEECCCCCEEEEEEEch------h---ccCHHHHHHHHHHHHccC--CCcccEEEEEEecCCEEE
Confidence            3678999999999999875 45 788996321      1   112357789999988765  4445544  445667788


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                      +|||+++. . ........+..+     ..++.++...|.-+|..
T Consensus        80 ivme~~~~-~-l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~  122 (299)
T d1ckia_          80 MVMELLGP-S-LEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK  122 (299)
T ss_dssp             EEEECCCC-B-HHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEcCC-c-hhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHC
Confidence            89999983 3 222222233322     25777888888888874

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.08  E-value=0.0015  Score=50.37  Aligned_cols=107  Identities=18%  Similarity=0.115  Sum_probs=73.6

Q ss_pred             Ccc-eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCCC
Q 045250           33 DDL-TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-DRTM  109 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~e~  109 (165)
                      +++ -.+.||.|..--||++...++ .|.||.-.    .    -....++...|+++|+.+.-  |. +.++|.+ ..+.
T Consensus        13 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~----~----~~~~~~~~~~E~~~l~~l~H--pn-Iv~~~g~~~~~~   81 (272)
T d1qpca_          13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK----Q----GSMSPDAFLAEANLMKQLQH--QR-LVRLYAVVTQEP   81 (272)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEEC----T----TSSCHHHHHHHHHHHHHCCC--TT-BCCEEEEECSSS
T ss_pred             HHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEc----c----CcCCHHHHHHHHHHHHhCCC--CC-EeEEEeeeccCC
Confidence            344 356799999999999998776 78899632    1    12456788899999988842  44 3445554 4455


Q ss_pred             ceEEEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ..+||||++  ..+|.+.+....   ..    -.++.+|+..|.-+|...
T Consensus        82 ~~iv~Ey~~--~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~  129 (272)
T d1qpca_          82 IYIITEYME--NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN  129 (272)
T ss_dssp             CEEEEECCT--TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEEEEeCC--CCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            679999998  335655443321   22    267899999999999754

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=97.02  E-value=0.0015  Score=52.64  Aligned_cols=104  Identities=13%  Similarity=0.092  Sum_probs=73.0

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~  111 (165)
                      -++.||.|..-.||++.+. +| .++||.-...-       ....++...|..+|+.+.-  | ++.+++.+  |.....
T Consensus        30 i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~-------~~~~~~~~~E~~il~~l~H--p-nIv~~~~~~~~~~~~~   99 (350)
T d1koaa2          30 IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH-------ESDKETVRKEIQTMSVLRH--P-TLVNLHDAFEDDNEMV   99 (350)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTEEEEEEEECCCS-------HHHHHHHHHHHHHHHHTCC--T-TBCCEEEEEEETTEEE
T ss_pred             EEEEEecCcCeEEEEEEECCCCCEEEEEEEcccc-------hhhHHHHHHHHHHHHhCCC--C-CCCcEEEEEEECCEEE
Confidence            3578999999999999875 56 78899643211       1234667788888887742  3 44555544  777888


Q ss_pred             EEEecCCCCchHHHHHHHcC--CCCH----HHHHHHHHHHHHHHhc
Q 045250          112 IGMRYLEPPHIILRKGLIAG--IKYP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g--~~~~----~~a~~iG~~La~~h~~  151 (165)
                      +||||++  +.+|.+.+.+.  ....    .++.+|...|.-+|..
T Consensus       100 ivmE~~~--gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~  143 (350)
T d1koaa2         100 MIYEFMS--GGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN  143 (350)
T ss_dssp             EEECCCC--SCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEcCC--CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            9999998  45777777542  2322    5778888889888865

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=0.0019  Score=50.56  Aligned_cols=107  Identities=14%  Similarity=0.037  Sum_probs=72.5

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCcc-ccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCc
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPY-VRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMS  110 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~-~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~  110 (165)
                      -.+.||.|..-.||++.+. +| .+.||.-... +..  +   -..++...|.++|+.+.-  |. +.++|.  .|.+..
T Consensus        12 i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~--~---~~~~~~~~E~~il~~l~H--pn-Iv~l~~~~~~~~~~   83 (288)
T d1uu3a_          12 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK--E---NKVPYVTRERDVMSRLDH--PF-FVKLYFTFQDDEKL   83 (288)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH--T---TCHHHHHHHHHHHHHCCS--TT-BCCEEEEEECSSEE
T ss_pred             EEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccC--H---HHHHHHHHHHHHHHHcCC--CC-eeEEEEEEEECCEE
Confidence            4567899999999999875 56 7889964322 111  1   234678889999987742  44 344443  366677


Q ss_pred             eEEEecCCCCchHHHHHHHcCC-CCH----HHHHHHHHHHHHHHhcc
Q 045250          111 LIGMRYLEPPHIILRKGLIAGI-KYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       111 ~~vMEdl~~~~~~lr~~l~~g~-~~~----~~a~~iG~~La~~h~~t  152 (165)
                      .+||||++  +.+|.+.+.... ...    .++.+|...|.-+|...
T Consensus        84 ~ivmEy~~--gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~  128 (288)
T d1uu3a_          84 YFGLSYAK--NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG  128 (288)
T ss_dssp             EEEECCCT--TEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEccC--CCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhcccc
Confidence            89999998  347777666543 333    46678888888888643

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.0034  Score=49.64  Aligned_cols=102  Identities=10%  Similarity=0.027  Sum_probs=72.5

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~  112 (165)
                      .+.||.|..-.||++.+. +| .+.||.-...-        .+..+...|.++|+.+.-  | ++.++|.  .|.....+
T Consensus        10 ~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~--------~~~~~~~~Ei~il~~l~H--p-nIv~~~~~~~~~~~~~l   78 (321)
T d1tkia_          10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG--------TDQVLVKKEISILNIARH--R-NILHLHESFESMEELVM   78 (321)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEECCCT--------HHHHHHHHHHHHHHHSCC--T-TBCCEEEEEEETTEEEE
T ss_pred             EEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc--------ccHHHHHHHHHHHHhCCC--C-CCCeEEEEEEECCEEEE
Confidence            578999999999999876 56 79999753211        223456678888877652  3 4555553  47788899


Q ss_pred             EEecCCCCchHHHHHHHcCC--CCH----HHHHHHHHHHHHHHhc
Q 045250          113 GMRYLEPPHIILRKGLIAGI--KYP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~--~~~----~~a~~iG~~La~~h~~  151 (165)
                      ||||++  +.+|.+.+.+..  ...    .++.+|...|.-+|..
T Consensus        79 vmE~~~--gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~  121 (321)
T d1tkia_          79 IFEFIS--GLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH  121 (321)
T ss_dssp             EECCCC--CCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEecCC--CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence            999998  357888886543  332    4678888999999965

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.94  E-value=0.0014  Score=50.88  Aligned_cols=105  Identities=14%  Similarity=0.008  Sum_probs=69.7

Q ss_pred             EeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc------CCC
Q 045250           38 KEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD------RTM  109 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D------~e~  109 (165)
                      ++||.|..-.||++.+. ++ .|.||.-...-.     -.-..++...|.++|+.+.   -.++.++|.+-      ...
T Consensus        15 ~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~-----~~~~~~~~~~E~~il~~l~---HpnIv~~~~~~~~~~~~~~~   86 (270)
T d1t4ha_          15 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-----TKSERQRFKEEAEMLKGLQ---HPNIVRFYDSWESTVKGKKC   86 (270)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-----CHHHHHHHHHHHHHHTTCC---CTTBCCEEEEEEEESSSCEE
T ss_pred             eEEecCcCcEEEEEEECCCCeEEEEEEEchhhC-----CHHHHHHHHHHHHHHHhCC---CCCeeeEEEEEeeccccCCE
Confidence            36999999999999876 45 788886432211     0112356677888887664   24456666542      123


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      ..+||||++  +.+|.+.+.+.... .    .++.+|...|.-+|...
T Consensus        87 ~~ivmE~~~--~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  132 (270)
T d1t4ha_          87 IVLVTELMT--SGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT  132 (270)
T ss_dssp             EEEEEECCC--SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred             EEEEEeCCC--CCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence            468999998  45787777665433 2    46788899999999764

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.91  E-value=0.0019  Score=50.90  Aligned_cols=106  Identities=11%  Similarity=-0.013  Sum_probs=69.9

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -.+.||.|..--||++.+. +| .+.||.-.....      .-...+...|.++|+.+.-  | ++.+++.  .|.....
T Consensus        13 ~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~------~~~~~~~~~Ei~il~~l~H--p-nIv~l~~~~~~~~~~~   83 (307)
T d1a06a_          13 FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKAL------EGKEGSMENEIAVLHKIKH--P-NIVALDDIYESGGHLY   83 (307)
T ss_dssp             EEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------------CHHHHHHHTCCC--T-TBCCEEEEEECSSEEE
T ss_pred             EEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHh------hhHHHHHHHHHHHHHhCCC--C-CCCcEEEEEEECCEEE
Confidence            3567999999999999876 45 688886432111      0112456678888877642  4 3455554  4666778


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  +.+|.+.|.+...+     ..++.+|...|.-+|...
T Consensus        84 lvmE~~~--gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~  127 (307)
T d1a06a_          84 LIMQLVS--GGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG  127 (307)
T ss_dssp             EEECCCC--SCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeccC--CCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhce
Confidence            9999998  45888888775443     257888889999898653

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.91  E-value=0.0019  Score=50.98  Aligned_cols=108  Identities=12%  Similarity=0.049  Sum_probs=70.8

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      .+++||.|..-.||++.+. +| .+.||.-.......    .-...+...|.++|+.+.  -|..| +++.  .|.....
T Consensus        19 ~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~----~~~~~~~~~Ei~il~~l~--HpnIv-~~~~~~~~~~~~~   91 (309)
T d1u5ra_          19 DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS----NEKWQDIIKEVRFLQKLR--HPNTI-QYRGCYLREHTAW   91 (309)
T ss_dssp             EEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCH----HHHHHHHHHHHHHHTTCC--CTTBC-CEEEEEEETTEEE
T ss_pred             eeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccC----HHHHHHHHHHHHHHHHCC--CCCEe-eEEEEEEECCEEE
Confidence            5889999999999999875 55 68888633211100    012245667888887764  24444 4443  4667788


Q ss_pred             EEEecCCCCchHHHHHHHcCCC-CH----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIK-YP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~-~~----~~a~~iG~~La~~h~~t  152 (165)
                      +||||+.  +..+...+..+.. ..    .++.+|...|.-+|...
T Consensus        92 iv~E~~~--~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~  135 (309)
T d1u5ra_          92 LVMEYCL--GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN  135 (309)
T ss_dssp             EEEECCS--EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEecC--CCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999998  3355544444433 32    57888899999999754

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.91  E-value=0.00098  Score=51.81  Aligned_cols=106  Identities=13%  Similarity=0.064  Sum_probs=70.9

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~  111 (165)
                      -++.||.|..--||++... +| .+.||.-... +.  .   -..++...|.++|+.+.-  | ++.++|.+  |.....
T Consensus         9 ~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~-~~--~---~~~~~~~~Ei~~l~~l~H--p-nIv~~~~~~~~~~~~~   79 (271)
T d1nvra_           9 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RA--V---DCPENIKKEICINKMLNH--E-NVVKFYGHRREGNIQY   79 (271)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------------CHHHHHHHHHTCCC--T-TBCCEEEEEEETTEEE
T ss_pred             EEEEEecCcCeEEEEEEECCCCCEEEEEEEehh-hc--c---hHHHHHHHHHHHHHhCCC--C-CEeeEeeeeccCceeE
Confidence            3578999999999999875 56 7899974311 11  1   123577889999887642  3 34555543  556667


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  +.+|.+.|.....+     -.++.+|...|.-+|...
T Consensus        80 ivmEy~~--gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~  123 (271)
T d1nvra_          80 LFLEYCS--GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG  123 (271)
T ss_dssp             EEEECCT--TEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeccC--CCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence            9999998  34777777654433     257788899999999754

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.90  E-value=0.0029  Score=49.85  Aligned_cols=106  Identities=14%  Similarity=0.080  Sum_probs=72.2

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-------c
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-------D  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-------D  106 (165)
                      -++.||.|..-.||++.+. +| .|.||.-.....     -....+|...|.++|+.+..  |..+ +++.+       +
T Consensus        22 i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-----~~~~~~~~~~Ei~il~~l~h--~~iv-~~~~~~~~~~~~~   93 (348)
T d2gfsa1          22 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-----SIIHAKRTYRELRLLKHMKH--ENVI-GLLDVFTPARSLE   93 (348)
T ss_dssp             EEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTS-----SHHHHHHHHHHHHHHHHCCC--TTBC-CCSEEECSCSSTT
T ss_pred             EEEEEecCCCeEEEEEEECCCCCEEEEEEECchhc-----ChHHHHHHHHHHHHHHhcCC--CCee-eEEEEEeeccccc
Confidence            3588999999999999875 56 799997442211     11234678889999988852  3332 33322       4


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhc
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~  151 (165)
                      ..++.++||++.  ..+|.+.+..+....    .++.+|...|.-+|..
T Consensus        94 ~~~~~~i~~~~~--gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~~  140 (348)
T d2gfsa1          94 EFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA  140 (348)
T ss_dssp             TCCCCEEEEECC--SEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCceEEEEEeec--CCchhhhcccccccHHHHHHHHHHHHHHHHHHHhC
Confidence            456688888887  347888776665543    4678888888888864

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.90  E-value=0.003  Score=48.89  Aligned_cols=105  Identities=14%  Similarity=0.006  Sum_probs=72.2

Q ss_pred             eEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cCCCceEEEe
Q 045250           37 IKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-DRTMSLIGMR  115 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~e~~~~vME  115 (165)
                      .+.||.|..--||++... +.+.||.-.....     -+-..++...|+++|+.+.-  |..| +++.+ +.....+|||
T Consensus        13 ~~~lG~G~fg~Vy~~~~~-~~vAvK~~~~~~~-----~~~~~~~~~~E~~~l~~l~H--pnIv-~~~~~~~~~~~~lv~E   83 (276)
T d1uwha_          13 GQRIGSGSFGTVYKGKWH-GDVAVKMLNVTAP-----TPQQLQAFKNEVGVLRKTRH--VNIL-LFMGYSTAPQLAIVTQ   83 (276)
T ss_dssp             CSEEEECSSCEEEEEESS-SEEEEEECCCSSC-----CTTHHHHHHHHHHHHTTCCC--TTBC-CEEEEECSSSCEEEEE
T ss_pred             EEEEeeCCCcEEEEEEEC-CEEEEEEEEcccC-----CHHHHHHHHHHHHHHHhCCC--CCEe-eeeEEEeccEEEEEEe
Confidence            467999999999999854 4788887542211     12234566778888877632  4444 56655 4455679999


Q ss_pred             cCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250          116 YLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       116 dl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      |++  +.+|.+.|....  ..    -.++.+|...|+-+|...
T Consensus        84 y~~--~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~  124 (276)
T d1uwha_          84 WCE--GSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS  124 (276)
T ss_dssp             CCC--EEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCC--CCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            998  568888886543  22    257889999999999753

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.89  E-value=0.0048  Score=47.91  Aligned_cols=103  Identities=18%  Similarity=0.078  Sum_probs=72.6

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~  112 (165)
                      .+.||.|..--||++... +| .|.||.-.    . .   ....++...|+++|+.+.-  |. +-++|.  .+.+...+
T Consensus        22 ~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~----~-~---~~~~~~~~~E~~il~~l~H--pn-Iv~~~~~~~~~~~~~i   90 (287)
T d1opja_          22 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLK----E-D---TMEVEEFLKEAAVMKEIKH--PN-LVQLLGVCTREPPFYI   90 (287)
T ss_dssp             EEETTTTTTSSEEEEEEGGGTEEEEEEECC----T-T---CSCHHHHHHHHHHHHHCCC--TT-BCCEEEEECSSSSCEE
T ss_pred             eeEEeeCCCeEEEEEEECCCCeEEEEEEEC----C-c---cchHHHHHHHHHHHHhCCC--CC-EecCCccEeeCCeeEE
Confidence            567999999999999875 45 78899642    1 1   2456788889999988742  44 444554  45567789


Q ss_pred             EEecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ||||++  ...+.+.|.+..   ..    -.++.+|+..|.-+|...
T Consensus        91 v~E~~~--~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~  135 (287)
T d1opja_          91 ITEFMT--YGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN  135 (287)
T ss_dssp             EEECCT--TCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             Eeeccc--CcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCC
Confidence            999998  346667665532   22    246789999999999764

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=96.83  E-value=0.0017  Score=52.25  Aligned_cols=104  Identities=18%  Similarity=0.174  Sum_probs=70.3

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~  111 (165)
                      -++.||.|..-.||++.+. +| .+.||.-...       -.....+...|.++|+.+.-  | ++.++|.+  |.....
T Consensus        33 i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~-------~~~~~~~~~~Ei~il~~l~H--p-nIv~~~~~~~~~~~~~  102 (352)
T d1koba_          33 ILEELGSGAFGVVHRCVEKATGRVFVAKFINTP-------YPLDKYTVKNEISIMNQLHH--P-KLINLHDAFEDKYEMV  102 (352)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------SHHHHHHHHHHHHHHTTCCS--T-TBCCEEEEEECSSEEE
T ss_pred             EEEEEecCCCeEEEEEEECCCCCEEEEEEECCc-------chhHHHHHHHHHHHHHhCCC--C-CCCcEEEEEEECCEEE
Confidence            4578999999999999875 56 7999964211       11233566678888876632  3 34455543  556667


Q ss_pred             EEEecCCCCchHHHHHHHcCC-CC-H----HHHHHHHHHHHHHHhc
Q 045250          112 IGMRYLEPPHIILRKGLIAGI-KY-P----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~-~~-~----~~a~~iG~~La~~h~~  151 (165)
                      +||||++  +.+|.+.+.+.. .+ +    .++.+|...|.-+|..
T Consensus       103 ivmE~~~--gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~  146 (352)
T d1koba_         103 LILEFLS--GGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH  146 (352)
T ss_dssp             EEEECCC--CCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEcCC--CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            9999998  346766665533 22 2    4678889999999864

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=96.78  E-value=0.0044  Score=48.49  Aligned_cols=103  Identities=10%  Similarity=0.082  Sum_probs=70.8

Q ss_pred             cc-eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE----c
Q 045250           34 DL-TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF----D  106 (165)
Q Consensus        34 ~~-~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~----D  106 (165)
                      +. -++.||.|..-.||++.+. +| .|.||.-.    .      ....|...|.++|+.+... | ++++++.+    +
T Consensus        36 ~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~----~------~~~~~~~~Ei~il~~l~~h-p-nIv~~~~~~~~~~  103 (328)
T d3bqca1          36 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILK----P------VKKKKIKREIKILENLRGG-P-NIITLADIVKDPV  103 (328)
T ss_dssp             GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC----S------SCHHHHHHHHHHHHHHTTS-T-TBCCEEEEEECTT
T ss_pred             CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEC----H------HHHHHHHHHHHHHHhccCC-C-CCcEEEEEEEecC
Confidence            44 4688999999999999985 55 78899732    1      2346788899999887643 3 45566643    2


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .....+||||++.  ..|....  +...    ..++.+|...|.-+|...
T Consensus       104 ~~~~~~v~e~~~~--~~L~~~~--~~l~e~~i~~i~~qil~aL~~LH~~g  149 (328)
T d3bqca1         104 SRTPALVFEHVNN--TDFKQLY--QTLTDYDIRFYMYEILKALDYCHSMG  149 (328)
T ss_dssp             TCSEEEEEECCCS--CBGGGTT--TSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCceeEEEeecCC--CcHHHHh--cCCCHHHHHHHHHHHHHHHHHHhhcc
Confidence            3457789999983  2443321  1221    358889999999999754

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.78  E-value=0.0038  Score=49.92  Aligned_cols=108  Identities=15%  Similarity=0.071  Sum_probs=73.8

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EEcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY-HFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~D~e~~~~  112 (165)
                      -++.||.|..--||++.+. +| .+.||.-....-..    .-..++...|..+|+.+..  |..+.-.. +.|.+...+
T Consensus         9 ~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~----~~~~~~~~~E~~il~~l~h--p~Iv~l~~~~~~~~~~~i   82 (337)
T d1o6la_           9 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA----KDEVAHTVTESRVLQNTRH--PFLTALKYAFQTHDRLCF   82 (337)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH----TTCHHHHHHHHHHHHSCCC--TTBCCEEEEEECSSEEEE
T ss_pred             EEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccC----HHHHHHHHHHHHHHHhCCC--CCEEEEEeeecccccccc
Confidence            4678999999999999975 56 78889864322111    1346788899999987642  44433332 445566678


Q ss_pred             EEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~  151 (165)
                      ||||++  +..|.+.+.++..+ +    .++.+|...|.-+|..
T Consensus        83 v~ey~~--gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~  124 (337)
T d1o6la_          83 VMEYAN--GGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR  124 (337)
T ss_dssp             EEECCT--TCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ceeccC--CCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhc
Confidence            999998  45777777775544 2    3566778888888854

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.72  E-value=0.0016  Score=50.27  Aligned_cols=112  Identities=13%  Similarity=-0.024  Sum_probs=74.2

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~~  112 (165)
                      .+.||.|..-.||++.+. +| .+.||.-...... .........|...|..+|+.+..-.|. +.+++.  .|+++..+
T Consensus         9 ~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~~~~~E~~il~~l~~~h~n-Iv~~~~~~~~~~~~~l   86 (273)
T d1xwsa_           9 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRIS-DWGELPNGTRVPMEVVLLKKVSSGFSG-VIRLLDWFERPDSFVL   86 (273)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-CEEECTTCCEEEHHHHHHHHHCSSSCS-BCCEEEEEECSSEEEE
T ss_pred             eEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHcc-chhhhhHHHHHHHHHHHHHHhccCCCC-ccEEEEEEeeCCeEEE
Confidence            367999999999999875 56 7889974432211 111123345677899999888642243 444443  56677899


Q ss_pred             EEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~  151 (165)
                      |||++. ....+.+.+..+..+ .    .++.+|...|.-+|..
T Consensus        87 v~e~~~-~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~  129 (273)
T d1xwsa_          87 ILERPE-PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC  129 (273)
T ss_dssp             EEECCS-SEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEecc-CcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            999997 455666666554433 2    4677888888888865

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.72  E-value=0.0036  Score=48.77  Aligned_cols=104  Identities=13%  Similarity=0.077  Sum_probs=72.7

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~  112 (165)
                      ++.||.|..-.||++.+. +| .+.||.-...-       .-..++...|.++|+.+.-  | ++.++|  +.|++...+
T Consensus        17 ~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-------~~~~~~~~~E~~il~~l~H--p-nIv~l~~~~~~~~~~~l   86 (288)
T d2jfla1          17 IGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS-------EEELEDYMVEIDILASCDH--P-NIVKLLDAFYYENNLWI   86 (288)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEECSS-------SGGGGGTHHHHHHHHHCCC--T-TBCCEEEEEEETTEEEE
T ss_pred             eEEEeeCCCcEEEEEEECCCCeEEEEEEECcCC-------HHHHHHHHHHHHHHHhCCC--C-CCCeEEEEEeeCCeEEE
Confidence            678999999999999875 45 78889743211       1234677889999987752  4 344554  346777889


Q ss_pred             EEecCCCCchHHHHHHHc-CC-CCH----HHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIA-GI-KYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~-g~-~~~----~~a~~iG~~La~~h~~t  152 (165)
                      ||||++  +..|.+.+.+ +. ..+    .++.+|...|.-+|...
T Consensus        87 vmEy~~--~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~  130 (288)
T d2jfla1          87 LIEFCA--GGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK  130 (288)
T ss_dssp             EEECCT--TEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEecCC--CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999998  3467776654 33 332    56778888888888754

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.69  E-value=0.0054  Score=48.35  Aligned_cols=107  Identities=16%  Similarity=0.147  Sum_probs=73.5

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~  112 (165)
                      ++.||.|...-||++.+. +| .+.||.-.......    .-..++...|+.+|+.+.-  |. +.+++  +.|++...+
T Consensus         9 ~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~----~~~~~~~~~E~~il~~l~H--pn-Iv~~~~~~~~~~~~~i   81 (316)
T d1fota_           9 LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVR----LKQVEHTNDERLMLSIVTH--PF-IIRMWGTFQDAQQIFM   81 (316)
T ss_dssp             EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH----TTCHHHHHHHHHHHHSCCB--TT-BCCEEEEEECSSEEEE
T ss_pred             EEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccC----HHHHHHHHHHHHHHHhccC--cC-hhheeeeEeeCCeeee
Confidence            678999999999999975 46 78899743322111    1245788899999987743  43 33444  345677789


Q ss_pred             EEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      ||||++ + ..+.+.+..+... .    .++.+|...|.-+|...
T Consensus        82 vmE~~~-g-g~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  124 (316)
T d1fota_          82 IMDYIE-G-GELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD  124 (316)
T ss_dssp             EECCCC-S-CBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             EeeecC-C-ccccccccccccccccHHHHHHHHHHHhhhhhccCc
Confidence            999998 3 3566666665543 2    36678888888888754

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.67  E-value=0.0078  Score=47.59  Aligned_cols=105  Identities=12%  Similarity=0.046  Sum_probs=68.6

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc-C-----
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD-R-----  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D-~-----  107 (165)
                      -++.||.|..-.||++.+. +| .+.||.-.+.      .-.-..+|...|.++|+.+..  |..+ +++.+- .     
T Consensus        12 ~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~------~~~~~~~~~~~Ei~il~~l~h--p~iv-~~~~~~~~~~~~~   82 (345)
T d1pmea_          12 NLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPF------EHQTYCQRTLREIKILLRFRH--ENII-GINDIIRAPTIEQ   82 (345)
T ss_dssp             EEEECC---CCCEEEEEETTTCSEEEEEEECCT------TCHHHHHHHHHHHHHHHHCCC--TTBC-CCCEEECCSSTTT
T ss_pred             EEEEEeeccCeEEEEEEECCCCcEEEEEEEehh------cChHHHHHHHHHHHHHHHcCC--CCCC-cEEEEEeeccccc
Confidence            6789999999999999875 56 7889974321      112234577889999988853  3322 222221 1     


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhc
Q 045250          108 TMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       108 e~~~~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~  151 (165)
                      ..+.++||++. + .+|.+.+..+....    .++.+|...|.-+|..
T Consensus        83 ~~~~~l~~~~~-~-g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~~  128 (345)
T d1pmea_          83 MKDVYLVTHLM-G-ADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA  128 (345)
T ss_dssp             CCCEEEEEECC-C-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cceEEEEEeec-C-CchhhhhhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            23577788887 3 48888887776543    4778888888888865

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.67  E-value=0.0068  Score=47.14  Aligned_cols=107  Identities=18%  Similarity=0.108  Sum_probs=72.9

Q ss_pred             Ccc-eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCCC
Q 045250           33 DDL-TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH-FDRTM  109 (165)
Q Consensus        33 ~~~-~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~e~  109 (165)
                      +++ -.+.||.|..--||++.+.++ .|.||.=.    .    ...+.++...|+..|+.++.  |. +-++|. +..+.
T Consensus        17 ~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~----~----~~~~~~~~~~E~~~l~~l~h--~n-Iv~~~g~~~~~~   85 (285)
T d1fmka3          17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK----P----GTMSPEAFLQEAQVMKKLRH--EK-LVQLYAVVSEEP   85 (285)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECC----T----TSSCHHHHHHHHHHHHHCCC--TT-BCCEEEEECSSS
T ss_pred             HHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEEC----c----ccCCHHHHHHHHHHHHhccc--CC-EeEEEEEEecCC
Confidence            344 446799999999999998876 78888732    1    12456788899999987753  33 344443 34466


Q ss_pred             ceEEEecCCCCchHHHHHHHc---CCCC----HHHHHHHHHHHHHHHhcc
Q 045250          110 SLIGMRYLEPPHIILRKGLIA---GIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~---g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ..+||||++ .+ .+...+..   +...    -.++.+|+..|+-+|...
T Consensus        86 ~~lv~Ey~~-~g-~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~  133 (285)
T d1fmka3          86 IYIVTEYMS-KG-SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN  133 (285)
T ss_dssp             CEEEECCCT-TC-BHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEEEEecC-CC-chhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhh
Confidence            889999998 33 44444332   1221    368999999999999764

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=96.63  E-value=0.005  Score=49.58  Aligned_cols=109  Identities=11%  Similarity=-0.022  Sum_probs=72.4

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCc-cccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALP-YVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p-~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      ++.||.|..-.||++... +| .+.||.-.. .+..     .-.......|...++.+..+--.++.+++.  .+++...
T Consensus         9 ~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~-----~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~   83 (364)
T d1omwa3           9 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM-----KQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS   83 (364)
T ss_dssp             EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH-----HTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             eeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcch-----hhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence            578999999999999875 56 788996432 1221     122345566777777776653233444443  4666778


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  +..|.+.|.++... +    .++.+|...|.-+|...
T Consensus        84 ivmE~~~--gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~  127 (364)
T d1omwa3          84 FILDLMN--GGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF  127 (364)
T ss_dssp             EEECCCC--SCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEecC--CCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998  35787777665543 2    46678888888888753

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.60  E-value=0.0047  Score=47.47  Aligned_cols=101  Identities=13%  Similarity=0.029  Sum_probs=69.0

Q ss_pred             eEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC-CceEE
Q 045250           37 IKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRT-MSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e-~~~~v  113 (165)
                      .+.||.|..-.||++...+..|.||.-.    .  .   ...++...|.++|+.+.   -.++-++|.+  +.. ...+|
T Consensus        12 ~~~lG~G~fg~Vy~~~~~~~~vAvK~i~----~--~---~~~~~~~~E~~~l~~l~---HpnIv~~~g~~~~~~~~~~lv   79 (262)
T d1byga_          12 LQTIGKGEFGDVMLGDYRGNKVAVKCIK----N--D---ATAQAFLAEASVMTQLR---HSNLVQLLGVIVEEKGGLYIV   79 (262)
T ss_dssp             EEEEEECSSCEEEEEEETTEEEEEEECC----C--C---C--HHHHHTHHHHTTCC---CTTBCCEEEEECCC--CCEEE
T ss_pred             eEEEecCCCeEEEEEEECCeEEEEEEEC----c--H---HHHHHHHHHHHHHHhCC---CCCEeeEEEEEEecCCcEEEE
Confidence            4569999999999999854389999642    1  1   23467788888887663   2356666653  443 45799


Q ss_pred             EecCCCCchHHHHHHHcCC---CC----HHHHHHHHHHHHHHHhc
Q 045250          114 MRYLEPPHIILRKGLIAGI---KY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g~---~~----~~~a~~iG~~La~~h~~  151 (165)
                      |||++  +.+|.+.|....   ..    -.++.+|+..|+-+|..
T Consensus        80 ~ey~~--~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~  122 (262)
T d1byga_          80 TEYMA--KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN  122 (262)
T ss_dssp             ECCCT--TEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EeccC--CCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccC
Confidence            99998  347777664421   22    25899999999999965

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.58  E-value=0.0035  Score=49.42  Aligned_cols=104  Identities=19%  Similarity=0.128  Sum_probs=71.7

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      -++.||.|..-.||++.+. +| .+.||.-....      -+...++...|..+|+.+.-  | ++.+++.  .|+....
T Consensus        10 ~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~------~~~~~~~~~~Ei~il~~l~H--p-nIv~l~~~~~~~~~~~   80 (322)
T d1s9ja_          10 KISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI------KPAIRNQIIRELQVLHECNS--P-YIVGFYGAFYSDGEIS   80 (322)
T ss_dssp             EEEEEECCSSCCEEEEEETTTTEEEEEEEEECCC------CTTHHHHHHHHGGGGGGCCC--T-TBCCEEEEEECSSEEE
T ss_pred             EEEEEecCCCeEEEEEEECCCCcEEEEEEEChhh------CHHHHHHHHHHHHHHHhCCC--C-CCCcEEEEEEECCEEE
Confidence            4678999999999999975 56 78888643211      12234577778888876642  4 3444543  4667788


Q ss_pred             EEEecCCCCchHHHHHHHcCC-CCH----HHHHHHHHHHHHHHh
Q 045250          112 IGMRYLEPPHIILRKGLIAGI-KYP----LLAEHMSEFMAKTLF  150 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~-~~~----~~a~~iG~~La~~h~  150 (165)
                      +||||++  +.+|.+.+.+.. ...    .++.+|...|.-+|.
T Consensus        81 iVmEy~~--gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~  122 (322)
T d1s9ja_          81 ICMEHMD--GGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE  122 (322)
T ss_dssp             EEEECCT--TEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEcCC--CCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999998  457888776543 332    466788888888885

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=96.45  E-value=0.011  Score=45.59  Aligned_cols=102  Identities=18%  Similarity=0.190  Sum_probs=67.7

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEc--CCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFD--RTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D--~e~~~~  112 (165)
                      .+.||.|....||++.+. +| .+.||--...         ...++.+.|.+.|+.+...  ..+|.++.+-  .....+
T Consensus        10 ~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~---------~~~~~~~~e~~~~~~l~~~--~~i~~~~~~~~~~~~~~~   78 (293)
T d1csna_          10 GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR---------SDAPQLRDEYRTYKLLAGC--TGIPNVYYFGQEGLHNVL   78 (293)
T ss_dssp             EEEEEECSSCEEEEEEETTTTEEEEEEEEECC---------TTSCCHHHHHHHHHHTTTC--TTCCCEEEEEEETTEEEE
T ss_pred             EEEEecCCCeEEEEEEECCCCCEEEEEEEccc---------cCcHHHHHHHHHHHHhcCC--CCCCEEEEEeecCCccEE
Confidence            578999999999999976 45 7889943111         1223567788888877652  3566666554  455689


Q ss_pred             EEecCCCCchHHHHHHHc-CCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIA-GIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~-g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      |||++++   .|.+.+.. +..+ .    .++.++...|..+|...
T Consensus        79 vme~~~~---~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~g  121 (293)
T d1csna_          79 VIDLLGP---SLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS  121 (293)
T ss_dssp             EEECCCC---BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             EEEecCC---CHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCC
Confidence            9999973   34444433 3333 2    47777788888888653

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.43  E-value=0.011  Score=46.02  Aligned_cols=102  Identities=15%  Similarity=-0.028  Sum_probs=68.2

Q ss_pred             eEeccCCceeEEEEEEeCCCeEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcCC------Cc
Q 045250           37 IKEVGDGNLNFVYIVVGTSGSFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDRT------MS  110 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~gsvIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~e------~~  110 (165)
                      .+.||.|..-.||++...+..|.||.-.    ..      ...+...|.+++....---|..++ +|.+..+      ..
T Consensus         8 ~~~iG~G~fg~Vy~~~~~g~~vAvK~~~----~~------~~~~~~~e~ei~~~~~~~HpnIv~-~~~~~~~~~~~~~~~   76 (303)
T d1vjya_           8 QESIGKGRFGEVWRGKWRGEEVAVKIFS----SR------EERSWFREAEIYQTVMLRHENILG-FIAADNKDNGTWTQL   76 (303)
T ss_dssp             EEEEECCSSSEEEEEEETTEEEEEEEEC----GG------GHHHHHHHHHHHTSTTCCCTTBCC-EEEEEEEECSSSEEE
T ss_pred             EEEEeeCCCeEEEEEEECCEEEEEEEEC----cc------chhHHHHHHHHHHHhhCCCCcCcc-eEEEEEeCCCcceEE
Confidence            3568999999999999764489999642    11      124556676666433221255554 4544332      23


Q ss_pred             eEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhc
Q 045250          111 LIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       111 ~~vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~  151 (165)
                      .+||||++  +.+|++.|.+....    -.++.++...|+.+|..
T Consensus        77 ~lv~Ey~~--~g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~  119 (303)
T d1vjya_          77 WLVSDYHE--HGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHME  119 (303)
T ss_dssp             EEEEECCT--TCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCC
T ss_pred             EEEEeccc--CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            69999998  45898888876544    26888999999999964

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.42  E-value=0.011  Score=46.55  Aligned_cols=107  Identities=17%  Similarity=0.089  Sum_probs=72.1

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCcc-ccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCce
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPY-VRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSL  111 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~-~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~  111 (165)
                      .+.||.|..-.||++... +| .+.||.-..- ...  .   -..++...|..+|...-.. |. +.++|  +.|.+...
T Consensus         7 ~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~--~---~~~~~~~~e~~~l~~~~~h-p~-Iv~~~~~~~~~~~~y   79 (320)
T d1xjda_           7 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLM--D---DDVECTMVEKRVLSLAWEH-PF-LTHMFCTFQTKENLF   79 (320)
T ss_dssp             EEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHH--T---TCHHHHHHHHHHHHHHTTC-TT-BCCEEEEEECSSEEE
T ss_pred             eeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccC--h---HHHHHHHHHHHHHHHhCCC-Cc-EEEEEEEEccCCcee
Confidence            578999999999999986 45 7889975322 111  1   2456778888877654332 43 33333  34667778


Q ss_pred             EEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      +||||++  +..|.+.+..+..+ .    .++.+|...|.-+|...
T Consensus        80 ivmEy~~--~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~  123 (320)
T d1xjda_          80 FVMEYLN--GGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG  123 (320)
T ss_dssp             EEEECCT--TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeecC--CCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999998  45788877665443 2    46777888888888653

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.34  E-value=0.014  Score=44.82  Aligned_cols=109  Identities=13%  Similarity=0.025  Sum_probs=68.3

Q ss_pred             eEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--EEcCCCceE
Q 045250           37 IKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--HFDRTMSLI  112 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--~~D~e~~~~  112 (165)
                      ++.||.|..-.||++.+. +| .+.||.-...-..  ..-.--..+...|..+|+.+..  |. +.++|  +.+.+...+
T Consensus         3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~--~~~~~~~~~~~~Ei~il~~l~h--pn-Iv~~~~~~~~~~~~~i   77 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRS--EAKDGINRTALREIKLLQELSH--PN-IIGLLDAFGHKSNISL   77 (299)
T ss_dssp             EEEEEEETTEEEEEEECSSCCSEEEEEEC--------------CTHHHHHHHHHHHCCC--TT-BCCEEEEECCTTCCEE
T ss_pred             ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhh--hhhHHHHHHHHHHHHHHHhCCC--CC-EeEEEeeeccCCceee
Confidence            677999988899999975 45 7999974322111  0001123577889999988752  33 33333  345566789


Q ss_pred             EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      ||||++  +..+......+..+     ..++.+|...|.-+|...
T Consensus        78 vmE~~~--~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~  120 (299)
T d1ua2a_          78 VFDFME--TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW  120 (299)
T ss_dssp             EEECCS--EEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred             hhhhhc--chHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccc
Confidence            999998  34555444433322     367889999999999764

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.31  E-value=0.017  Score=45.30  Aligned_cols=105  Identities=19%  Similarity=0.143  Sum_probs=63.9

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-cC-----
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-DR-----  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-D~-----  107 (165)
                      .+++||.|..-.||++.+. +| .+.||.-..-..     -....++...|.++|+.+..  |..| +++.+ ..     
T Consensus        22 ~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~-----~~~~~~~~~~Ei~il~~l~h--pniv-~l~~~~~~~~~~~   93 (346)
T d1cm8a_          22 DLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ-----SELFAKRAYRELRLLKHMRH--ENVI-GLLDVFTPDETLD   93 (346)
T ss_dssp             EEEEC------CEEEEEETTTCCEEEEEECSSTTS-----SHHHHHHHHHHHHHHHHCCB--TTBC-CCSEEECSCSSTT
T ss_pred             EEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhc-----ChHHHHHHHHHHHHHHhcCC--CCee-EEEEEeccCcccc
Confidence            5788999999999999875 46 789998542111     11234677889999988742  4333 33332 21     


Q ss_pred             --CCceEEEecCCCCchHHHHHHHcCCCCH----HHHHHHHHHHHHHHhc
Q 045250          108 --TMSLIGMRYLEPPHIILRKGLIAGIKYP----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       108 --e~~~~vMEdl~~~~~~lr~~l~~g~~~~----~~a~~iG~~La~~h~~  151 (165)
                        ....+|||+++.   .+...+..+....    .++.+|...|.-+|..
T Consensus        94 ~~~~~~lv~e~~~~---~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~  140 (346)
T d1cm8a_          94 DFTDFYLVMPFMGT---DLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA  140 (346)
T ss_dssp             TCCCCEEEEECCSE---EHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccceEEEEEecccc---cHHHHHHhccccHHHHHHHHHHHHHHHHHHHhC
Confidence              235899999972   4545454555443    4678888888888865

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.20  E-value=0.029  Score=42.43  Aligned_cols=108  Identities=9%  Similarity=-0.009  Sum_probs=73.5

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCC-ceEEEEcCCCceE
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHV-PEVYHFDRTMSLI  112 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~v-P~v~~~D~e~~~~  112 (165)
                      -++.||.|..-.||++.+. +| -|.||.-.    .. ..-.-...|...|..+|+.+..  |..+ -.-++.+++...+
T Consensus         6 ~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~----~~-~~~~~~~~~~~~E~~il~~l~h--~niv~~~~~~~~~~~~~i   78 (292)
T d1unla_           6 KLEKIGEGTYGTVFKAKNRETHEIVALKRVR----LD-DDDEGVPSSALREICLLKELKH--KNIVRLHDVLHSDKKLTL   78 (292)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEE----SS-CSSTTHHHHHHHHHHHHTTCCC--TTBCCEEEEEECSSEEEE
T ss_pred             eeeEEecCcCeEEEEEEECCCCcEEEEEEEe----hh-hCChHHHHHHHHHHHHHHhcCc--CCEEeeccccccccceeE
Confidence            4688999999999999986 45 68899742    11 1112345678889999877643  3222 2234567778889


Q ss_pred             EEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhcc
Q 045250          113 GMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       113 vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +||++.  +..+...+..+...     -.++.++...|+-+|...
T Consensus        79 v~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~  121 (292)
T d1unla_          79 VFEFCD--QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN  121 (292)
T ss_dssp             EEECCS--EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             Eeeecc--ccccccccccccccchhHHHHHHHHHHHHHHHhhcCC
Confidence            999997  45666666665543     257788888888888753

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.19  E-value=0.019  Score=45.48  Aligned_cols=102  Identities=17%  Similarity=0.146  Sum_probs=69.9

Q ss_pred             ccee-E-eccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--c-
Q 045250           34 DLTI-K-EVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--D-  106 (165)
Q Consensus        34 ~~~v-~-~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D-  106 (165)
                      +..+ . .||.|..-.||++.+. +| .+.||.-    +.        ..+...|.++|...... | ++.++|.+  | 
T Consensus        12 ~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i----~~--------~~~~~~E~~~~~~~~~h-p-nIv~l~~~~~~~   77 (335)
T d2ozaa1          12 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML----QD--------CPKARREVELHWRASQC-P-HIVRIVDVYENL   77 (335)
T ss_dssp             TEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEE----EC--------SHHHHHHHHHHHHHTTS-T-TBCCEEEEEEEE
T ss_pred             CEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEE----CC--------cHHHHHHHHHHHHhcCC-C-CCCeEEEEEeec
Confidence            4554 3 4999999999999875 55 8889963    21        25777888887555432 3 45556543  2 


Q ss_pred             ---CCCceEEEecCCCCchHHHHHHHcC--CCC-----HHHHHHHHHHHHHHHhc
Q 045250          107 ---RTMSLIGMRYLEPPHIILRKGLIAG--IKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       107 ---~e~~~~vMEdl~~~~~~lr~~l~~g--~~~-----~~~a~~iG~~La~~h~~  151 (165)
                         .....+||||++  +.+|.+.|.+.  ..+     -.++.+|...|+-+|..
T Consensus        78 ~~~~~~~~ivmEy~~--gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~  130 (335)
T d2ozaa1          78 YAGRKCLLIVMECLD--GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI  130 (335)
T ss_dssp             ETTEEEEEEEEECCC--SEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccCCCEEEEEEECCC--CCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHc
Confidence               234689999998  45888888662  233     25778888899999865

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=96.14  E-value=0.026  Score=42.95  Aligned_cols=107  Identities=13%  Similarity=0.038  Sum_probs=71.9

Q ss_pred             eeEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCce-EEEEcCCCceEE
Q 045250           36 TIKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPE-VYHFDRTMSLIG  113 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~-v~~~D~e~~~~v  113 (165)
                      .+++||.|..--||++.+.+| .+.||.-..-..     -.-...|...|..+|+.+..  |..+.- -.+.+.+...++
T Consensus         6 ~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~-----~~~~~~~~~~E~~il~~l~h--pnIv~~~~~~~~~~~~~i~   78 (286)
T d1ob3a_           6 GLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKE-----DEGIPSTTIREISILKELKH--SNIVKLYDVIHTKKRLVLV   78 (286)
T ss_dssp             EEEEEEEETTEEEEEEEETTSCEEEEEEECCSSG-----GGCCCHHHHHHHHGGGGCCC--TTBCCEEEEEECSSCEEEE
T ss_pred             eccEEecCCCcEEEEEEeCCCCEEEEEEEehhhc-----ChHHHHHHHHHHHHHHhCCC--CcEEeeeeecccCCceeEE
Confidence            478899999999999998877 899996421111     11234788889999987742  433322 234566777788


Q ss_pred             EecCCCCchHHHHHHHcCCC-C----HHHHHHHHHHHHHHHhc
Q 045250          114 MRYLEPPHIILRKGLIAGIK-Y----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g~~-~----~~~a~~iG~~La~~h~~  151 (165)
                      ||+++  ...+......... .    ..++.+|...|.-+|..
T Consensus        79 ~e~~~--~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~  119 (286)
T d1ob3a_          79 FEHLD--QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR  119 (286)
T ss_dssp             EECCS--EEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEeeh--hhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccC
Confidence            88887  4455555444433 2    25788888999999975

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.10  E-value=0.023  Score=44.54  Aligned_cols=106  Identities=14%  Similarity=0.015  Sum_probs=69.4

Q ss_pred             eEeccCCceeEEEEEEeCC----C---eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC
Q 045250           37 IKEVGDGNLNFVYIVVGTS----G---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDR  107 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~----g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~  107 (165)
                      .+.||.|..--||++....    +   .|.||.-.....      .-...+...|..+|+.+..+ | ++.++|.  .|+
T Consensus        42 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~~H-p-nIv~l~~~~~~~  113 (325)
T d1rjba_          42 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD------SSEREALMSELKMMTQLGSH-E-NIVNLLGACTLS  113 (325)
T ss_dssp             EEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------------CHHHHHHHHHHHHHCCC-T-TBCCEEEEECSS
T ss_pred             eeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccC------HHHHHHHHHHHHHHHHhcCC-C-cEeEEEEEEeeC
Confidence            4678999999999998631    1   366665443221      12335677888888877543 3 3445553  366


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCC------------------------CC----HHHHHHHHHHHHHHHhcc
Q 045250          108 TMSLIGMRYLEPPHIILRKGLIAGI------------------------KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 e~~~~vMEdl~~~~~~lr~~l~~g~------------------------~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +...+||||++  +.+|.+.|.+..                        ..    -.++.+|+..|+-+|...
T Consensus       114 ~~~~lv~Ey~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~  184 (325)
T d1rjba_         114 GPIYLIFEYCC--YGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS  184 (325)
T ss_dssp             SSCEEEEECCT--TCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CeEEEEEEcCC--CCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            77789999998  457878776532                        11    147889999999999754

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.09  E-value=0.02  Score=44.47  Aligned_cols=109  Identities=15%  Similarity=0.011  Sum_probs=70.8

Q ss_pred             Ccce-eEeccCCceeEEEEEEeC-CC----eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-
Q 045250           33 DDLT-IKEVGDGNLNFVYIVVGT-SG----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-  105 (165)
Q Consensus        33 ~~~~-v~~l~~Gn~N~v~rV~~~-~g----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-  105 (165)
                      +.+. .+.||.|..--||++... +|    -+.||.-.....      .-..++...|+++|+.+. + |. +-++|.+ 
T Consensus        26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~-H-pn-Iv~l~g~~   96 (299)
T d1jpaa_          26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYT------EKQRRDFLSEASIMGQFD-H-PN-VIHLEGVV   96 (299)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCC------HHHHHHHHHHHHHHTTCC-C-TT-BCCEEEEE
T ss_pred             hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccC------HHHHHHHHHHHHHHHhCC-C-CC-CccEEEEE
Confidence            3443 357999999999999874 22    366776543211      112346677888887763 1 43 3455554 


Q ss_pred             -cCCCceEEEecCCCCchHHHHHHHcCC--CCH----HHHHHHHHHHHHHHhcc
Q 045250          106 -DRTMSLIGMRYLEPPHIILRKGLIAGI--KYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 -D~e~~~~vMEdl~~~~~~lr~~l~~g~--~~~----~~a~~iG~~La~~h~~t  152 (165)
                       +.+...+||||++  ...|.+.+....  ...    .++.+|+..|.-+|...
T Consensus        97 ~~~~~~~iv~Ey~~--~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~  148 (299)
T d1jpaa_          97 TKSTPVMIITEFME--NGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN  148 (299)
T ss_dssp             CSSSSCEEEEECCT--TEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eeCCEEEEEEEecC--CCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence             5677899999998  347777666632  222    57889999999999753

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.08  E-value=0.031  Score=43.52  Aligned_cols=105  Identities=14%  Similarity=0.058  Sum_probs=67.2

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-----eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCC
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH-FDRT  108 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~e  108 (165)
                      .++.||.|..--||++... +|     .|+||.-....      -.-..++...|+++|+.+.-  |..| ++|. +-.+
T Consensus        13 ~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~E~~~l~~l~H--pnIv-~l~g~~~~~   83 (317)
T d1xkka_          13 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT------SPKANKEILDEAYVMASVDN--PHVC-RLLGICLTS   83 (317)
T ss_dssp             EEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----------CTHHHHHHHHHHHHHCCC--TTBC-CEEEEEESS
T ss_pred             EeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEecccc------CHHHHHHHHHHHHHHHhCCC--CCEe-eEEEEEecC
Confidence            5679999999999999764 33     36666543211      12235678889999988742  5444 4443 3445


Q ss_pred             CceEEEecCCCCchHHHHHHHcC-CCC-H----HHHHHHHHHHHHHHhc
Q 045250          109 MSLIGMRYLEPPHIILRKGLIAG-IKY-P----LLAEHMSEFMAKTLFY  151 (165)
Q Consensus       109 ~~~~vMEdl~~~~~~lr~~l~~g-~~~-~----~~a~~iG~~La~~h~~  151 (165)
                      +..++||++. .+ .|.+.+... ... .    .++.+|+..|+-+|..
T Consensus        84 ~~~~v~e~~~-~~-~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~  130 (317)
T d1xkka_          84 TVQLITQLMP-FG-CLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR  130 (317)
T ss_dssp             SEEEEEECCT-TC-BHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CeeEEEEecc-CC-cccccccccccCCCHHHHHHHHHHHHHHHHHHHHc
Confidence            6678889988 34 444444443 332 2    4788999999999975

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.02  E-value=0.018  Score=45.94  Aligned_cols=108  Identities=19%  Similarity=0.087  Sum_probs=72.2

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCcc-ccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EEcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPY-VRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY-HFDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~-~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~D~e~~~  111 (165)
                      -++.||.|..--||++.+. +| .+.||.-... ...     .-..++...|..+|+.+.  .|..+.-.. +.+.....
T Consensus        45 i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~-----~~~~~~~~~E~~il~~l~--hpnIv~~~~~~~~~~~~~  117 (350)
T d1rdqe_          45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-----LKQIEHTLNEKRILQAVN--FPFLVKLEFSFKDNSNLY  117 (350)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH-----TTCHHHHHHHHHHHTTCC--CTTBCCEEEEEECSSEEE
T ss_pred             EEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccC-----HHHHHHHHHHHHHHHHcC--CCcEeecccccccccccc
Confidence            5689999999999999875 56 7889974321 111     134578888999987763  244333332 34556667


Q ss_pred             EEEecCCCCchHHHHHHHcCC-CCH----HHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLIAGI-KYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~~g~-~~~----~~a~~iG~~La~~h~~t  152 (165)
                      +|||++. ++ .+.+.+.+.. ...    .++.+|...|.-+|...
T Consensus       118 ~v~e~~~-~g-~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~  161 (350)
T d1rdqe_         118 MVMEYVA-GG-EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD  161 (350)
T ss_dssp             EEEECCT-TC-BHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccccccc-cc-chhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999998 33 5666665543 333    46778888888888653

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.98  E-value=0.04  Score=42.44  Aligned_cols=107  Identities=12%  Similarity=0.039  Sum_probs=66.9

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--------
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--------  105 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--------  105 (165)
                      -+.+||.|....||++.+. +| .+.||+-...-.   .  .-...+...|..+|+.+..  |..+.-.-.+        
T Consensus        14 i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~---~--~~~~~~~~~E~~il~~l~h--~nii~~~~~~~~~~~~~~   86 (318)
T d3blha1          14 KLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE---K--EGFPITALREIKILQLLKH--ENVVNLIEICRTKASPYN   86 (318)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEC----C---T--TSSCHHHHHHHHHHHHCCC--TTBCCEEEEEEC------
T ss_pred             EEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhc---c--hHHHHHHHHHHHHHHHhcC--CCccceEeeeeccccccc
Confidence            5689999999999999975 56 799997422111   1  1234678889999998853  4433332222        


Q ss_pred             -cCCCceEEEecCCCCchHHHHHHHcCCCC-----HHHHHHHHHHHHHHHhc
Q 045250          106 -DRTMSLIGMRYLEPPHIILRKGLIAGIKY-----PLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       106 -D~e~~~~vMEdl~~~~~~lr~~l~~g~~~-----~~~a~~iG~~La~~h~~  151 (165)
                       +.....+|||+++  ...+......+..+     -.++.+|...|.-+|..
T Consensus        87 ~~~~~~~iv~e~~~--~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~  136 (318)
T d3blha1          87 RCKGSIYLVFDFCE--HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN  136 (318)
T ss_dssp             ----CEEEEEECCC--EEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccCceEEEEEeccC--CCccchhhhcccccccHHHHHHHHHHHHHHHHhccC
Confidence             2234568999998  33444333333332     25678888888888864

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.91  E-value=0.023  Score=43.50  Aligned_cols=111  Identities=10%  Similarity=0.045  Sum_probs=67.9

Q ss_pred             eeEeccCCceeEEEEEEeC-C-C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-------
Q 045250           36 TIKEVGDGNLNFVYIVVGT-S-G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-------  105 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~-g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-------  105 (165)
                      -++.||.|..-.||++.+. + + -|.||.-.....  ..   -...+...|..+|+.+...--.++.++|.+       
T Consensus        11 i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~--~~---~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_          11 CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTG--EE---GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBC--TT---SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             EEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhc--cc---hHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            5688999999999999874 3 4 467897543221  11   122345678888988876533345555533       


Q ss_pred             cCCCceEEEecCCCCchHHHHHHHcCCCC-H----HHHHHHHHHHHHHHhcc
Q 045250          106 DRTMSLIGMRYLEPPHIILRKGLIAGIKY-P----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       106 D~e~~~~vMEdl~~~~~~lr~~l~~g~~~-~----~~a~~iG~~La~~h~~t  152 (165)
                      +.....++||+++. ..........+... .    .++.+|...|.-+|...
T Consensus        86 ~~~~~~~~~e~~~~-~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~  136 (305)
T d1blxa_          86 RETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR  136 (305)
T ss_dssp             SEEEEEEEEECCSC-BHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCceEEEEEEeccC-CchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            12346799999983 32211222222222 2    47888889999888754

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.83  E-value=0.02  Score=43.50  Aligned_cols=106  Identities=19%  Similarity=0.088  Sum_probs=68.3

Q ss_pred             eeEeccCCceeEEEEEEeCC----C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCCC
Q 045250           36 TIKEVGDGNLNFVYIVVGTS----G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH-FDRTM  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~----g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~e~  109 (165)
                      -.+.||.|..--||++....    + .+.||.-.....      .-..++...|+++|+.+.-  |.. -++|. +....
T Consensus        11 l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~------~~~~~~~~~E~~~l~~l~H--pnI-v~l~~~~~~~~   81 (273)
T d1mp8a_          11 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS------DSVREKFLQEALTMRQFDH--PHI-VKLIGVITENP   81 (273)
T ss_dssp             EEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTS------HHHHHHHHHHHHHHHTCCC--TTB-CCEEEEECSSS
T ss_pred             EEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccC------HHHHHHHHHHHHHHHhCCC--CCE-eeEEEEEecCe
Confidence            35789999999999997642    2 466776532221      1123566778888877642  444 44555 44566


Q ss_pred             ceEEEecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ..+||||++  ...+.+.+....  ..    -.++.+|...|.-+|...
T Consensus        82 ~~iv~E~~~--~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~  128 (273)
T d1mp8a_          82 VWIIMELCT--LGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR  128 (273)
T ss_dssp             CEEEEECCT--TEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEEecc--CCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccC
Confidence            789999998  345666555433  22    256788899999998753

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.76  E-value=0.032  Score=43.29  Aligned_cols=106  Identities=16%  Similarity=-0.012  Sum_probs=70.4

Q ss_pred             eEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC
Q 045250           37 IKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DR  107 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~  107 (165)
                      .+.||.|..-.||+++..      ++ .|.||+-.+-.      ......+...|+.+|+.+..+ |..| ++|.+  +.
T Consensus        28 ~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~------~~~~~~~~~~E~~~~~~l~~H-pnIv-~~~g~~~~~   99 (311)
T d1t46a_          28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA------HLTEREALMSELKVLSYLGNH-MNIV-NLLGACTIG   99 (311)
T ss_dssp             EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC------CHHHHHHHHHHHHHHHHHCCC-TTBC-CEEEEECSS
T ss_pred             eeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECccc------CHHHHHHHHHHHHHHHhccCC-CCEE-EEEEEEeeC
Confidence            567999999999999752      33 68888765321      223344566788888876543 3333 45554  44


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCC-------------------CC----HHHHHHHHHHHHHHHhcc
Q 045250          108 TMSLIGMRYLEPPHIILRKGLIAGI-------------------KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 e~~~~vMEdl~~~~~~lr~~l~~g~-------------------~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ....+||||++  +.++.+.|....                   ..    ..++.+|...|+-+|...
T Consensus       100 ~~~~lvmE~~~--~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~  165 (311)
T d1t46a_         100 GPTLVITEYCC--YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN  165 (311)
T ss_dssp             SSCEEEEECCT--TEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEEEEcCC--CCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            55789999998  346666665432                   11    257899999999999764

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.64  E-value=0.049  Score=41.25  Aligned_cols=103  Identities=18%  Similarity=0.125  Sum_probs=70.0

Q ss_pred             eEeccCCceeEEEEEEeCCC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCCCceEE
Q 045250           37 IKEVGDGNLNFVYIVVGTSG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRTMSLIG  113 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e~~~~v  113 (165)
                      ++.||.|-.--||++...++ .|.||.-    +. +   ....+-...|...|+.+.  -|..+ ++|.+  ++....+|
T Consensus         9 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~l----~~-~---~~~~~~~~~Ev~~~~~l~--HpnIv-~~~g~~~~~~~~~iv   77 (258)
T d1k2pa_           9 LKELGTGQFGVVKYGKWRGQYDVAIKMI----KE-G---SMSEDEFIEEAKVMMNLS--HEKLV-QLYGVCTKQRPIFII   77 (258)
T ss_dssp             CCCCCEETTEEEEEEEETTTEEEEEEEE----ES-S---SSCHHHHHHHHHHHHTCC--CTTBC-CEEEEECCSSSEEEE
T ss_pred             eEEEecCCCeEEEEEEECCCCEEEEEEE----Cc-C---cCCHHHHHHHHHHHHhcC--CCcee-eEEEEEeeCCceEEE
Confidence            46799899989999998767 7888962    22 1   234566777888887774  25444 44443  44566789


Q ss_pred             EecCCCCchHHHHHHHcCC--CC----HHHHHHHHHHHHHHHhcc
Q 045250          114 MRYLEPPHIILRKGLIAGI--KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       114 MEdl~~~~~~lr~~l~~g~--~~----~~~a~~iG~~La~~h~~t  152 (165)
                      |||++ . ..+.+.+....  ..    -.++.+|+..|+-+|...
T Consensus        78 ~Ey~~-~-g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~  120 (258)
T d1k2pa_          78 TEYMA-N-GCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ  120 (258)
T ss_dssp             EECCT-T-EEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEccC-C-CcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcC
Confidence            99998 3 35666655532  22    258889999999999753

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.51  E-value=0.05  Score=41.72  Aligned_cols=106  Identities=15%  Similarity=0.135  Sum_probs=67.2

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCCce
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTMSL  111 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~~~  111 (165)
                      .++.||.|....||++.+. +| .++||.-..-..  .+   -..++...|.++|+.+.-  | ++.++|.  .|.....
T Consensus         6 ~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~--~~---~~~~~~~~Ei~il~~l~H--p-~Iv~~~~~~~~~~~~~   77 (298)
T d1gz8a_           6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE--TE---GVPSTAIREISLLKELNH--P-NIVKLLDVIHTENKLY   77 (298)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEC------------CCHHHHHHHHHHTTCCC--T-TBCCEEEEEEETTEEE
T ss_pred             eccEEecCcCeEEEEEEECCCCCEEEEEEEehhhc--Ch---HHHHHHHHHHHHHHhCCC--C-cEEEecccccccccee
Confidence            4688999999999999875 56 788997532111  11   123677789999987642  3 3444443  4556678


Q ss_pred             EEEecCCCCchHHHHHHH-c-CC-CC----HHHHHHHHHHHHHHHhcc
Q 045250          112 IGMRYLEPPHIILRKGLI-A-GI-KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       112 ~vMEdl~~~~~~lr~~l~-~-g~-~~----~~~a~~iG~~La~~h~~t  152 (165)
                      +|||+++ .. .+ +.+. . +. ..    ..++.+|...|.-+|...
T Consensus        78 iv~e~~~-~~-~~-~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~  122 (298)
T d1gz8a_          78 LVFEFLH-QD-LK-KFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR  122 (298)
T ss_dssp             EEEECCS-EE-HH-HHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeecC-Cc-hh-hhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCC
Confidence            9999998 32 22 2222 2 22 22    257888888998888765

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.47  E-value=0.038  Score=42.16  Aligned_cols=107  Identities=17%  Similarity=0.084  Sum_probs=66.0

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcCCC--
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDRTM--  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~e~--  109 (165)
                      -++.||.|..-.||++.+. +| .+.||.-..... .    .....+...|.++|+.+.   -.++.++|.  +|..+  
T Consensus         8 ~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~----~~~~~~~~~E~~il~~l~---HpnIv~~~~~~~~~~~~~   79 (269)
T d2java1           8 VLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-T----EAEKQMLVSEVNLLRELK---HPNIVRYYDRIIDRTNTT   79 (269)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTS-C----HHHHHHHHHHHHHTTSCC---CTTBCCEEEEEEC----C
T ss_pred             EeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhC-C----HHHHHHHHHHHHHHHHCC---CCCEeeEEEEEEeCCCCE
Confidence            4578999999999999875 56 788996432110 0    112345566777765553   234555653  44433  


Q ss_pred             ceEEEecCCCCchHHHHHHHc----CC-CCH----HHHHHHHHHHHHHHhcc
Q 045250          110 SLIGMRYLEPPHIILRKGLIA----GI-KYP----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~----g~-~~~----~~a~~iG~~La~~h~~t  152 (165)
                      ..+||||++  +.+|.+.+.+    +. ...    .++.+|...|.-+|...
T Consensus        80 ~~ivmEy~~--~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~  129 (269)
T d2java1          80 LYIVMEYCE--GGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS  129 (269)
T ss_dssp             EEEEEECCT--TEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             EEEEEecCC--CCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence            357999998  3477776643    22 322    57788888898898643

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.41  E-value=0.021  Score=44.38  Aligned_cols=112  Identities=18%  Similarity=0.142  Sum_probs=71.7

Q ss_pred             CCCccee-EeccCCceeEEEEEEeC-CC---eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE--
Q 045250           31 KFDDLTI-KEVGDGNLNFVYIVVGT-SG---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY--  103 (165)
Q Consensus        31 ~~~~~~v-~~l~~Gn~N~v~rV~~~-~g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~--  103 (165)
                      +.+++++ +.||-|..--||++... +|   .|.||+-.....      .-..++...|.++|+.+..+ |.. -++|  
T Consensus         8 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~E~~~l~~l~~H-pnI-v~~~~~   79 (309)
T d1fvra_           8 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS------KDDHRDFAGELEVLCKLGHH-PNI-INLLGA   79 (309)
T ss_dssp             CGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------------CHHHHHHHHHTTCCCC-TTB-CCEEEE
T ss_pred             CHHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccC------hHHHHHHHHHHHHHHhccCC-CCE-eeEEEE
Confidence            3445543 67999999999999875 34   356776432221      12345778899999876443 433 3333  


Q ss_pred             EEcCCCceEEEecCCCCchHHHHHHHcC----------------CCC-----HHHHHHHHHHHHHHHhcc
Q 045250          104 HFDRTMSLIGMRYLEPPHIILRKGLIAG----------------IKY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       104 ~~D~e~~~~vMEdl~~~~~~lr~~l~~g----------------~~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +.+.....+||||++  +.+|.+.|...                ...     ..++.+|+..|.-+|...
T Consensus        80 ~~~~~~~~iV~ey~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~  147 (309)
T d1fvra_          80 CEHRGYLYLAIEYAP--HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ  147 (309)
T ss_dssp             EEETTEEEEEECCCT--TCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EecCCeeEEEEEecC--CCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCC
Confidence            345566789999998  45787777543                111     357899999999888753

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.31  E-value=0.038  Score=43.61  Aligned_cols=106  Identities=14%  Similarity=0.086  Sum_probs=66.3

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE-------c
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF-------D  106 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~-------D  106 (165)
                      -+..||.|..-.||++.+. +| .+.||.-..-..  .   .-...|...|..+|+.+.  .|..+.-.-.|       +
T Consensus        21 i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~--~---~~~~~~~~~Ei~il~~l~--hpnIv~~~~~f~~~~~~~~   93 (355)
T d2b1pa1          21 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ--N---QTHAKRAYRELVLMKCVN--HKNIISLLNVFTPQKTLEE   93 (355)
T ss_dssp             EEEECSCC--CEEEEEEETTTTEEEEEEEEESTTS--S---HHHHHHHHHHHHHHHHCC--CTTBCCCSEEECSCCSTTT
T ss_pred             EEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhc--C---HHHHHHHHHHHHHHHhcC--CCCeeEEEEEEeccccccc
Confidence            4689999999999999876 46 899997432111  0   112357788999998874  24433322222       2


Q ss_pred             CCCceEEEecCCCCchHHHHHHHcCCCC----HHHHHHHHHHHHHHHhcc
Q 045250          107 RTMSLIGMRYLEPPHIILRKGLIAGIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       107 ~e~~~~vMEdl~~~~~~lr~~l~~g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .....+||||+.  +..++ .+. +...    ..++.+|...|.-+|...
T Consensus        94 ~~~~~iv~Ey~~--~~l~~-~~~-~~~~~~~i~~~~~qil~gl~~LH~~g  139 (355)
T d2b1pa1          94 FQDVYLVMELMD--ANLCQ-VIQ-MELDHERMSYLLYQMLCGIKHLHSAG  139 (355)
T ss_dssp             CCEEEEEEECCS--EEHHH-HHT-SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CceeEEEEeccc--hHHHH-hhh-cCCCHHHHHHHHHHHHHHHHHhhhcc
Confidence            345579999998  33443 332 3332    257888888888888764

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.23  E-value=0.071  Score=40.95  Aligned_cols=106  Identities=14%  Similarity=0.028  Sum_probs=71.3

Q ss_pred             eeEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EEcC
Q 045250           36 TIKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY-HFDR  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~D~  107 (165)
                      -+++||.|..--||++...      ++ .|.||.-.....      .-..++...|.++|+.+..  |..++-.- +.+.
T Consensus        17 ~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~------~~~~~~~~~E~~il~~l~h--~niv~~~~~~~~~   88 (301)
T d1lufa_          17 YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS------ADMQADFQREAALMAEFDN--PNIVKLLGVCAVG   88 (301)
T ss_dssp             EEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC------HHHHHHHHHHHHHHHTCCC--TTBCCEEEEECSS
T ss_pred             EeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcC------hHHHHHHHHHHHHHHhcCC--CCcccceeeeccC
Confidence            6788999999999999853      33 578887432111      0123577889999887742  44333332 3456


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCCC-----------------------------CHHHHHHHHHHHHHHHhc
Q 045250          108 TMSLIGMRYLEPPHIILRKGLIAGIK-----------------------------YPLLAEHMSEFMAKTLFY  151 (165)
Q Consensus       108 e~~~~vMEdl~~~~~~lr~~l~~g~~-----------------------------~~~~a~~iG~~La~~h~~  151 (165)
                      ....++||+++  +.+|.+.|.....                             --.++.+|+..|+-+|..
T Consensus        89 ~~~~~v~e~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~  159 (301)
T d1lufa_          89 KPMCLLFEYMA--YGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER  159 (301)
T ss_dssp             SSCEEEEECCT--TCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CceEEEEEecC--CCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccC
Confidence            78899999998  4577777754221                             125788999999999975

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.23  E-value=0.065  Score=40.94  Aligned_cols=108  Identities=11%  Similarity=-0.061  Sum_probs=64.8

Q ss_pred             eeEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEEcC-
Q 045250           36 TIKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHFDR-  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~D~-  107 (165)
                      -.+.||.|..-.||++...      ++ .|.||+-..-..      .-...+...|...|...... |..+.....+.. 
T Consensus        17 ~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~------~~~~~~~~~e~~~l~~~~~h-~~iv~~~~~~~~~   89 (299)
T d1ywna1          17 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT------HSEHRALMSELKILIHIGHH-LNVVNLLGACTKP   89 (299)
T ss_dssp             EEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----C------HHHHHHHHHHHHHHHHHCCC-TTBCCEEEEECST
T ss_pred             EeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccC------cHHHHHHHHHHHHHHhhcCC-CeEEEeeeeeccC
Confidence            3578999999999999853      23 477887432111      11234555666666655432 333333333332 


Q ss_pred             -CCceEEEecCCCCchHHHHHHHcCC-----------------C----CHHHHHHHHHHHHHHHhcc
Q 045250          108 -TMSLIGMRYLEPPHIILRKGLIAGI-----------------K----YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 -e~~~~vMEdl~~~~~~lr~~l~~g~-----------------~----~~~~a~~iG~~La~~h~~t  152 (165)
                       ....+||||++  +.+|.+.|....                 .    .-.++.+|...|.-+|...
T Consensus        90 ~~~~~iv~E~~~--~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~  154 (299)
T d1ywna1          90 GGPLMVIVEFCK--FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK  154 (299)
T ss_dssp             TSCCEEEEECCT--TCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCeEEEEEEecC--CCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             24578999998  457777765421                 1    1257889999999999754

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.19  E-value=0.051  Score=41.46  Aligned_cols=108  Identities=19%  Similarity=0.092  Sum_probs=61.4

Q ss_pred             eeEeccCCceeEEEEEEeC--CC---eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE-EcCCC
Q 045250           36 TIKEVGDGNLNFVYIVVGT--SG---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH-FDRTM  109 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~--~g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~-~D~e~  109 (165)
                      -++.||.|-.--||++...  ++   .|.||.-.+.... .   .-..++...|.+.|+.+. . |..+ ++|. +....
T Consensus        12 ~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~-~---~~~~~~~~~Ei~~l~~l~-H-~nIv-~~~g~~~~~~   84 (273)
T d1u46a_          12 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLS-Q---PEAMDDFIREVNAMHSLD-H-RNLI-RLYGVVLTPP   84 (273)
T ss_dssp             EEEECC----CCCEEEEEECTTSCEEEEEEEC------------CHHHHHHHHHHHHHHHCC-C-TTBC-CEEEEECSSS
T ss_pred             EEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcC-C---HHHHHHHHHHHHHHHhCC-C-CCEE-EEEEEEeecc
Confidence            4578999999999999753  33   4667764322211 0   112356778888888773 2 4444 4453 44456


Q ss_pred             ceEEEecCCCCchHHHHHHHc--CCCC----HHHHHHHHHHHHHHHhcc
Q 045250          110 SLIGMRYLEPPHIILRKGLIA--GIKY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~--g~~~----~~~a~~iG~~La~~h~~t  152 (165)
                      ..+||||++ .+ .+.+.+..  +...    -.++.+|+..|.-+|...
T Consensus        85 ~~lv~e~~~-~~-~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~  131 (273)
T d1u46a_          85 MKMVTELAP-LG-SLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR  131 (273)
T ss_dssp             CEEEEECCT-TC-BHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hheeeeeec-Cc-chhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCC
Confidence            689999998 34 33333332  2222    267888999999999754

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.00  E-value=0.034  Score=43.54  Aligned_cols=109  Identities=17%  Similarity=0.146  Sum_probs=74.0

Q ss_pred             eEeccCCceeEEEEEEeC----CC-eEEEEecCcc-ccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE-EEcCCC
Q 045250           37 IKEVGDGNLNFVYIVVGT----SG-SFVIKQALPY-VRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY-HFDRTM  109 (165)
Q Consensus        37 v~~l~~Gn~N~v~rV~~~----~g-svIvKqa~p~-~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~-~~D~e~  109 (165)
                      ++.||-|....||++...    +| .+.||.-... +..   + .-..++...|+++|+.+... |..+.-.. +.|+..
T Consensus        29 ~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~---~-~~~~~~~~~E~~il~~l~h~-pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          29 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQ---K-AKTTEHTRTERQVLEHIRQS-PFLVTLHYAFQTETK  103 (322)
T ss_dssp             EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEE---E-ESSGGGCCCHHHHHHHHHTC-TTBCCEEEEEEETTE
T ss_pred             EEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhcc---c-hHHHHHHHHHHHHHHhccCC-CeEEEeeeeeccCCc
Confidence            589999999999999763    34 6889974322 211   1 12357888999999988652 44444333 346788


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t  152 (165)
                      ..++||++.  +.+|.+.+..+...+     .++.+|...|.-+|...
T Consensus       104 ~~~v~e~~~--~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~  149 (322)
T d1vzoa_         104 LHLILDYIN--GGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLG  149 (322)
T ss_dssp             EEEEECCCC--SCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eeeeeeccc--ccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCC
Confidence            889999998  457777777765432     35667777777777643

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.88  E-value=0.1  Score=39.69  Aligned_cols=106  Identities=16%  Similarity=0.057  Sum_probs=67.2

Q ss_pred             eeEeccCCceeEEEEEEeCC--C----eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEE--EcC
Q 045250           36 TIKEVGDGNLNFVYIVVGTS--G----SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYH--FDR  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~~--g----svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~D~  107 (165)
                      ..+.||.|..--||++....  +    .|.||.-..-..      .-...+...|+++|+.+.-  |. +-++|.  .+.
T Consensus        11 ~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~------~~~~~~~~~E~~il~~l~H--~n-Iv~~~g~~~~~   81 (283)
T d1mqba_          11 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT------EKQRVDFLGEAGIMGQFSH--HN-IIRLEGVISKY   81 (283)
T ss_dssp             EEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCC------HHHHHHHHHHHHHHHTCCC--TT-BCCEEEEECSS
T ss_pred             eeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccC------hHHHHHHHHHHHHHHhcCC--CC-EeeeeEEEecC
Confidence            34558999999999987542  1    477887532111      1122355678888877642  44 444554  366


Q ss_pred             CCceEEEecCCCCchHHHHHHHcCC-CC-----HHHHHHHHHHHHHHHhcc
Q 045250          108 TMSLIGMRYLEPPHIILRKGLIAGI-KY-----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 e~~~~vMEdl~~~~~~lr~~l~~g~-~~-----~~~a~~iG~~La~~h~~t  152 (165)
                      +...+|||++. . ..+.+.+.+.. .+     -.++.+|+..|.-+|...
T Consensus        82 ~~~~~v~e~~~-~-~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~  130 (283)
T d1mqba_          82 KPMMIITEYME-N-GALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN  130 (283)
T ss_dssp             SSEEEEEECCT-T-EEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CceEEEEEecc-c-CcchhhhhcccccccHHHHHHHHHHHHHhhhhccccc
Confidence            78889999998 3 35555555432 22     268888999999999643

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.65  E-value=0.056  Score=42.46  Aligned_cols=103  Identities=17%  Similarity=0.178  Sum_probs=64.1

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cC----
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DR----  107 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~----  107 (165)
                      .++.||.|..-.||++.+. +| .|.||.-.    . ..      .....|.++|+.+..  | ++.+++.+  +.    
T Consensus        24 ~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~----~-~~------~~~~~Ei~il~~l~h--~-niv~~~~~~~~~~~~~   89 (350)
T d1q5ka_          24 DTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----Q-DK------RFKNRELQIMRKLDH--C-NIVRLRYFFYSSGEKK   89 (350)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEE----C-CS------SSCCHHHHHHHHCCC--T-TBCCEEEEEEEC--CC
T ss_pred             eeeEEeeCcCeEEEEEEECCCCCEEEEEEEC----c-cc------hHHHHHHHHHHhcCC--C-CCCcEEEEEEecCccC
Confidence            4567999999999999986 45 78888632    1 11      112258889887742  3 34444332  11    


Q ss_pred             -C-CceEEEecCCCC-chHHHHHHHcCCCCH-----HHHHHHHHHHHHHHhcc
Q 045250          108 -T-MSLIGMRYLEPP-HIILRKGLIAGIKYP-----LLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       108 -e-~~~~vMEdl~~~-~~~lr~~l~~g~~~~-----~~a~~iG~~La~~h~~t  152 (165)
                       + .-.+||||++.+ ...++.....+..++     .++.+|...|.-+|...
T Consensus        90 ~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~  142 (350)
T d1q5ka_          90 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG  142 (350)
T ss_dssp             SCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             CceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence             1 136899999831 134544444444332     57889999999999753

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.55  E-value=0.2  Score=38.29  Aligned_cols=112  Identities=16%  Similarity=0.006  Sum_probs=65.2

Q ss_pred             CCcce-eEeccCCceeEEEEEEeCC--------C-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCce
Q 045250           32 FDDLT-IKEVGDGNLNFVYIVVGTS--------G-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPE  101 (165)
Q Consensus        32 ~~~~~-v~~l~~Gn~N~v~rV~~~~--------g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~  101 (165)
                      .+.+. .+.||.|..-.||++....        + .|.||.-.....      .-.......|...|..+... |..|+-
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~------~~~~~~~~~e~~~l~~~~~H-pnIv~~   84 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT------EKDLSDLISEMEMMKMIGKH-KNIINL   84 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCC------HHHHHHHHHHHHHHHHHCCC-TTBCCE
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccC------hHHHHHHHHHHHHHHHhcCC-CeEEec
Confidence            34554 4789999999999997531        1 356666543221      11234556676777666443 444443


Q ss_pred             EE-EEcCCCceEEEecCCCCchHHHHHHHcCC-----------------CC----HHHHHHHHHHHHHHHhcc
Q 045250          102 VY-HFDRTMSLIGMRYLEPPHIILRKGLIAGI-----------------KY----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       102 v~-~~D~e~~~~vMEdl~~~~~~lr~~l~~g~-----------------~~----~~~a~~iG~~La~~h~~t  152 (165)
                      .- +.|.....+||||+.  ...+.+.|....                 ..    -.++.+|...|.-+|...
T Consensus        85 ~~~~~~~~~~~~v~e~~~--~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~  155 (299)
T d1fgka_          85 LGACTQDGPLYVIVEYAS--KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK  155 (299)
T ss_dssp             EEEECSSSSCEEEECCCT--TCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccccccCCeEEEEEEccC--CCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCC
Confidence            32 234566778999998  457777776432                 11    367888888898888754

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.95  E-value=0.066  Score=41.40  Aligned_cols=111  Identities=19%  Similarity=0.117  Sum_probs=69.7

Q ss_pred             CCcc-eeEeccCCceeEEEEEEeC------CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEE
Q 045250           32 FDDL-TIKEVGDGNLNFVYIVVGT------SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVY  103 (165)
Q Consensus        32 ~~~~-~v~~l~~Gn~N~v~rV~~~------~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~  103 (165)
                      .+++ -.+.||.|...-||++...      ++ .|.||.-....      ..-...+...|+.+|+.+.  .|..++-.-
T Consensus        19 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~------~~~~~~~~~~E~~il~~l~--h~nIv~~~~   90 (308)
T d1p4oa_          19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA------SMRERIEFLNEASVMKEFN--CHHVVRLLG   90 (308)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS------CHHHHHHHHHHHHHGGGCC--CTTBCCEEE
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECccc------ChHHHHHHHHHHHHHHHcC--CCCEeeeee
Confidence            3455 4566999999999998753      23 68889753211      1112345667877777664  255554444


Q ss_pred             EE-cCCCceEEEecCCCCchHHHHHHHcCC--------C-------CHHHHHHHHHHHHHHHhcc
Q 045250          104 HF-DRTMSLIGMRYLEPPHIILRKGLIAGI--------K-------YPLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       104 ~~-D~e~~~~vMEdl~~~~~~lr~~l~~g~--------~-------~~~~a~~iG~~La~~h~~t  152 (165)
                      .+ +.+...+|||+++.  .+|.+.+....        .       .-.++.+++..|+-+|...
T Consensus        91 ~~~~~~~~~lv~e~~~~--g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~  153 (308)
T d1p4oa_          91 VVSQGQPTLVIMELMTR--GDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK  153 (308)
T ss_dssp             EECSSSSCEEEEECCTT--CBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEecCCceeEEEeecCC--CCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            33 45677889999983  35555544311        0       1358889999999999764

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.85  E-value=0.13  Score=39.93  Aligned_cols=104  Identities=15%  Similarity=0.127  Sum_probs=67.7

Q ss_pred             EeccCCceeEEEEEEeCC--C---eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccCCCCCceEEEE--cCC-C
Q 045250           38 KEVGDGNLNFVYIVVGTS--G---SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLCPDHVPEVYHF--DRT-M  109 (165)
Q Consensus        38 ~~l~~Gn~N~v~rV~~~~--g---svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--D~e-~  109 (165)
                      +.||.|..--||++...+  +   .+.||.=...      .-.-..+|...|+++|+.+.-  | ++-++|.+  +.+ .
T Consensus        33 ~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~------~~~~~~~~~~~E~~~l~~l~H--p-nIv~~~g~~~~~~~~  103 (311)
T d1r0pa_          33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI------TDIGEVSQFLTEGIIMKDFSH--P-NVLSLLGICLRSEGS  103 (311)
T ss_dssp             EEEEEETTEEEEEEEECC----CEEEEEEEECCC------CCHHHHHHHHHHHHHHHTCCC--T-TBCCCCEEEEETTTE
T ss_pred             eEEeecCCeEEEEEEEECCCCEEEEEEEEEECcc------cCHHHHHHHHHHHHHHHhCCC--C-CEeEEeEEEEecCCc
Confidence            368999999999998743  2   2556753211      112234678899999887742  3 44455543  444 5


Q ss_pred             ceEEEecCCCCchHHHHHHHcCCC--C----HHHHHHHHHHHHHHHhcc
Q 045250          110 SLIGMRYLEPPHIILRKGLIAGIK--Y----PLLAEHMSEFMAKTLFYT  152 (165)
Q Consensus       110 ~~~vMEdl~~~~~~lr~~l~~g~~--~----~~~a~~iG~~La~~h~~t  152 (165)
                      ..+||||++  ...+.+.+.....  .    -.++.+++..|.-+|...
T Consensus       104 ~~lv~E~~~--~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~  150 (311)
T d1r0pa_         104 PLVVLPYMK--HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK  150 (311)
T ss_dssp             EEEEEECCT--TCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEEEEEee--cCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccC
Confidence            689999998  3477776665432  1    258888888888888743

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.47  E-value=1.3  Score=33.70  Aligned_cols=107  Identities=10%  Similarity=0.003  Sum_probs=65.5

Q ss_pred             eeEeccCCceeEEEEEEeC-CC-eEEEEecCccccccCCCCCCChHHHHHHHHHHHHhhccC--------CCCCceEEE-
Q 045250           36 TIKEVGDGNLNFVYIVVGT-SG-SFVIKQALPYVRCIGESWPMTKERAYFEALALKEHGKLC--------PDHVPEVYH-  104 (165)
Q Consensus        36 ~v~~l~~Gn~N~v~rV~~~-~g-svIvKqa~p~~r~~~~~~~l~~~R~~~E~~~L~~~~~~~--------p~~vP~v~~-  104 (165)
                      -++.||.|....||++.+. +| .|.||.-..-        ....++...|..+|+.+....        -.++.+++. 
T Consensus        17 i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~--------~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~   88 (362)
T d1q8ya_          17 LVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD--------KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH   88 (362)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECSC--------HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred             EEEEEeeCCCeEEEEEEECCCCCEEEEEEEecc--------ccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEE
Confidence            3899999999999999975 56 7889974311        122367778888988886421        023444432 


Q ss_pred             ---EcCCCceEEEecCCCCchHHHHHHHcC-CCC-----HHHHHHHHHHHHHHHh
Q 045250          105 ---FDRTMSLIGMRYLEPPHIILRKGLIAG-IKY-----PLLAEHMSEFMAKTLF  150 (165)
Q Consensus       105 ---~D~e~~~~vMEdl~~~~~~lr~~l~~g-~~~-----~~~a~~iG~~La~~h~  150 (165)
                         -++....++|++............... ..+     ..+..+|...|.-+|.
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~  143 (362)
T d1q8ya_          89 FNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR  143 (362)
T ss_dssp             EEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             eeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhh
Confidence               244556677777763222222222222 121     2577788888888886