Citrus Sinensis ID: 045265

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-----
MGSDPRFVMILPLLALALSLFVANADAAVSLPQPVKLEWHYYKVHNTCDDAEAYIRHQVELFYKHDKTIAPKLLRLLYSDCFVTGCDASILLDRPNSEKTAPQNWGLGAFVLIDKIKVVLEQRCPGAVSCSDILNLATRDAVHMAGAPSYPVFTGRRDGMTSTKESVDLPSPSISWKESLACFQSKGLDVQDMVTLLGAHTMGQTRCRYIVDRLYNYKNTGKPDPSMNTTLLNRLRKECPPRTRKGQSDPLVYLNPETGSSYRFSESYYSRVKTHEAVLGVDQQLSNGDNNTLQIVDEFAAGFEDFRKALALSMSRMGSINVLTGKQGEIRRNCRCTNADTNCKR
cccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHccccccccHHHccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHccccccccHHHHcccccHHHHHHHHHccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccc
ccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccHHHcccccccccHHHccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccEccEEcccccHHHHccccccccHHHHHHHHHcccccHHHHHHHHHHHHccEEEHHHcHHHHHcHHHcccccccccHHHHHHHHHHcccccccccccccEEEcccccccccccHHHHHHHHHcccccccHHHHHccccccHHHHHHHHccHHHHHHHHHHHHHHHcccccccccccEcccEccEccccccccc
mgsdprfvMILPLLALALSLFVAnadaavslpqpvkleWHYYKVHNTCDDAEAYIRHQVELFYKHDKTIAPKLLRLLYSdcfvtgcdasilldrpnsektapqnwglgAFVLIDKIKVVLeqrcpgavscsdiLNLATRdavhmagapsypvftgrrdgmtstkesvdlpspsiswkESLACfqskgldvQDMVTLLGAHTMGQTRCRYIVDRLYnykntgkpdpsmnTTLLNRlrkecpprtrkgqsdplvylnpetgssyrfsesyysrvktheavlgvdqqlsngdnntLQIVDEFAAGFEDFRKALALSMSRMGSinvltgkqgeirrncrctnadtnckr
MGSDPRFVMILPLLALALSLFVANADAAVSLPQPVKLEWHYYKVHNTCDDAEAYIRHQVELFYKHDKTIAPKLLRLLYSDCFVTGCDASILLDRPNSektapqnwglGAFVLIDKIKVVLEQRCPGAVSCSDILNLATRDAVHMAGAPSYPVFTGRRDGMTSTKESVDLPSPSISWKESLACFQSKGLDVQDMVTLLGahtmgqtrcRYIVDRLYNYkntgkpdpsmntTLLNRLrkecpprtrkgqsdplvylnpetgssYRFSESYYSRVKTHEAVLGvdqqlsngdNNTLQIVDEFAAGFEDFRKALALSMSRMGSInvltgkqgeirrncrctnadtnckr
MGSDPRFVMIlpllalalslfvanaDAAVSLPQPVKLEWHYYKVHNTCDDAEAYIRHQVELFYKHDKTIAPKLLRLLYSDCFVTGCDASILLDRPNSEKTAPQNWGLGAFVLIDKIKVVLEQRCPGAVSCSDILNLATRDAVHMAGAPSYPVFTGRRDGMTSTKESVDLPSPSISWKESLACFQSKGLDVQDMVTLLGAHTMGQTRCRYIVDRLYNYKNTGKPDPSMNTTLLNRLRKECPPRTRKGQSDPLVYLNPETGssyrfsesyysrVKTHEAVLGVDQQLSNGDNNTLQIVDEFAAGFEDFRKALALSMSRMGSINVLTGKQGEIRRNCRCTNADTNCKR
******FVMILPLLALALSLFVANADAAVSLPQPVKLEWHYYKVHNTCDDAEAYIRHQVELFYKHDKTIAPKLLRLLYSDCFVTGCDASILLDRPN***TAPQNWGLGAFVLIDKIKVVLEQRCPGAVSCSDILNLATRDAVHMAGAPSYPVFT*******************ISWKESLACFQSKGLDVQDMVTLLGAHTMGQTRCRYIVDRLYNYKN*********************************Y********YRFSESYYSRVKTHEAVLGVDQQLSNGDNNTLQIVDEFAAGFEDFRKALALSMSRMGSINVLTGKQGEIRRNCRC*********
***********PLLALALSLFVANADAAVSLPQPVKLEWHYYKVHNTCDDAEAYIRHQVELFYKHDKTIAPKLLRLLYSDCFVTGCDASILLDRPNSEKTAPQNWGLGAFVLIDKIKVVLEQRCPGAVSCSDILNLATRDAVHMAGAPSYPVFTGRRDGMTSTKESVDLPSPSISWKESLACFQSKGLDVQDMVTLLGAHTMGQTRCRYIVDRLYNYKNTGKPDPSMNTTLLNRLRKECP********DPLVYLNPETGSSYRFSESYYSRVKTHEAVLGVDQQLSNGDNNTLQIVDEFAAGFEDFRKALALSMSRMGSINVLTGKQGEIRRNCR***A******
MGSDPRFVMILPLLALALSLFVANADAAVSLPQPVKLEWHYYKVHNTCDDAEAYIRHQVELFYKHDKTIAPKLLRLLYSDCFVTGCDASILLDRPNSEKTAPQNWGLGAFVLIDKIKVVLEQRCPGAVSCSDILNLATRDAVHMAGAPSYPVFTGRRDG*************SISWKESLACFQSKGLDVQDMVTLLGAHTMGQTRCRYIVDRLYNYKNTGKPDPSMNTTLLNRLRKEC********SDPLVYLNPETGSSYRFSESYYSRVKTHEAVLGVDQQLSNGDNNTLQIVDEFAAGFEDFRKALALSMSRMGSINVLTGKQGEIRRNCRCT********
****PRFVMILPLLALALSLFVANADAAVSLPQPVKLEWHYYKVHNTCDDAEAYIRHQVELFYKHDKTIAPKLLRLLYSDCFVTGCDASILLDRPNSEKTAPQNWGLGAFVLIDKIKVVLEQRCPGAVSCSDILNLATRDAVHMAGAPSYPVFTGRRDGMTSTKESVDLPSPSISWKESLACFQSKGLDVQDMVTLLGAHTMGQTRCRYIVDRLYNYKNTGKPDPSMNTTLLNRLRKECPPRTRKGQSDPLVYLNPETGSSYRFSESYYSRVKTHEAVLGVDQQLSNGDNNTLQIVDEFAAGFEDFRKALALSMSRMGSINVLTGKQGEIRRNCRCTN*******
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGSDPRFVMILPLLALALSLFVANADAAVSLPQPVKLEWHYYKVHNTCDDAEAYIRHQVELFYKHDKTIAPKLLRLLYSDCFVTGCDASILLDRPNSEKTAPQNWGLGAFVLIDKIKVVLEQRCPGAVSCSDILNLATRDAVHMAGAPSYPVFTGRRDGMTSTKESVDLPSPSISWKESLACFQSKGLDVQDMVTLLGAHTMGQTRCRYIVDRLYNYKNTGKPDPSMNTTLLNRLRKECPPRTRKGQSDPLVYLNPETGSSYRFSESYYSRVKTHEAVLGVDQQLSNGDNNTLQIVDEFAAGFEDFRKALALSMSRMGSINVLTGKQGEIRRNCRCTNADTNCKR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query345 2.2.26 [Sep-21-2011]
Q9FLV5340 Probable peroxidase 61 OS yes no 0.968 0.982 0.718 1e-141
O22862335 Probable peroxidase 26 OS no no 0.956 0.985 0.661 1e-135
Q43729313 Peroxidase 57 OS=Arabidop no no 0.834 0.920 0.423 1e-63
Q9SS67321 Peroxidase 28 OS=Arabidop no no 0.866 0.931 0.414 9e-62
Q9FMR0331 Peroxidase 60 OS=Arabidop no no 0.855 0.891 0.409 8e-59
Q9LHB9352 Peroxidase 32 OS=Arabidop no no 0.843 0.826 0.409 2e-58
P15233332 Peroxidase C1C (Fragment) N/A no 0.843 0.876 0.4 4e-58
Q9LEH3327 Peroxidase 15 OS=Ipomoea N/A no 0.901 0.951 0.391 1e-57
Q9FG34358 Peroxidase 54 OS=Arabidop no no 0.918 0.885 0.373 2e-57
Q42578335 Peroxidase 53 OS=Arabidop no no 0.915 0.943 0.371 1e-56
>sp|Q9FLV5|PER61_ARATH Probable peroxidase 61 OS=Arabidopsis thaliana GN=PER61 PE=3 SV=1 Back     alignment and function desciption
 Score =  502 bits (1292), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 242/337 (71%), Positives = 278/337 (82%), Gaps = 3/337 (0%)

Query: 6   RFVMILPLLALALSLFVANA--DAAVSLPQPVKLEWHYYKVHNTCDDAEAYIRHQVELFY 63
           +FV   PLLAL +      A  +AA  L  PVKL WHYYK+ NTCDDAE YIR+QVE FY
Sbjct: 2   QFVNFFPLLALVVISLAGKATVEAATGLNPPVKLVWHYYKLTNTCDDAETYIRYQVEKFY 61

Query: 64  KHDKTIAPKLLRLLYSDCFVTGCDASILLDRPNSEKTAPQNWGLGAFVLIDKIKVVLEQR 123
           K+D +IAPKLLRLLYSDC V GCD SILL  PNSE+TAPQN GLG FV+IDKIK VLE R
Sbjct: 62  KNDSSIAPKLLRLLYSDCMVNGCDGSILLQGPNSERTAPQNRGLGGFVIIDKIKQVLESR 121

Query: 124 CPGAVSCSDILNLATRDAVHMAGAPSYPVFTGRRDGMTSTKESVDLPSPSISWKESLACF 183
           CPG VSC+DILNLATRDAVHMAGAPSYPVFTGRRDG T   ++VDLPSPSIS  ESLA F
Sbjct: 122 CPGVVSCADILNLATRDAVHMAGAPSYPVFTGRRDGGTLNADAVDLPSPSISVDESLAYF 181

Query: 184 QSKGLDVQDMVTLLGAHTMGQTRCRYIVDRLYNYKNTGKPDPSMNTTLLNRLRKECPPRT 243
           +SKGLDV DM TLLGAH+MG+T C Y+VDRLYN+KNTGKPDP+MNTTL+++LR  CPPRT
Sbjct: 182 KSKGLDVLDMTTLLGAHSMGKTHCSYVVDRLYNFKNTGKPDPTMNTTLVSQLRYLCPPRT 241

Query: 244 RKGQSDPLVYLNPETGSSYRFSESYYSRVKTHEAVLGVDQQLSNGDNNTLQIVDEFAAGF 303
           +KGQ+DPLVYLNP++GSS RF+ SYYSRV +H AVL VDQ+L N D++  +I  EFA+GF
Sbjct: 242 QKGQTDPLVYLNPDSGSSNRFTSSYYSRVLSHNAVLRVDQELLNNDDSK-EITQEFASGF 300

Query: 304 EDFRKALALSMSRMGSINVLTGKQGEIRRNCRCTNAD 340
           EDFRK+ AL+MSRMGSINVLTG  GEIRR+CR TNA+
Sbjct: 301 EDFRKSFALAMSRMGSINVLTGTAGEIRRDCRVTNAN 337
Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress (Probable). The enzyme activity has to be proved.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7
>sp|O22862|PER26_ARATH Probable peroxidase 26 OS=Arabidopsis thaliana GN=PER26 PE=2 SV=2 Back     alignment and function description
>sp|Q43729|PER57_ARATH Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1 Back     alignment and function description
>sp|Q9SS67|PER28_ARATH Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1 Back     alignment and function description
>sp|Q9FMR0|PER60_ARATH Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1 Back     alignment and function description
>sp|Q9LHB9|PER32_ARATH Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=1 SV=3 Back     alignment and function description
>sp|P15233|PER1C_ARMRU Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1 Back     alignment and function description
>sp|Q9LEH3|PER15_IPOBA Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1 Back     alignment and function description
>sp|Q9FG34|PER54_ARATH Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1 Back     alignment and function description
>sp|Q42578|PER53_ARATH Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query345
15237884340 peroxidase [Arabidopsis thaliana] gi|263 0.968 0.982 0.718 1e-139
297812563341 peroxidase family protein [Arabidopsis l 0.968 0.979 0.715 1e-139
224095650341 predicted protein [Populus trichocarpa] 0.953 0.964 0.693 1e-136
30689391335 peroxidase [Arabidopsis thaliana] gi|254 0.956 0.985 0.661 1e-133
19310389335 At2g43480/T1O24.22 [Arabidopsis thaliana 0.956 0.985 0.658 1e-133
25285613325 probable peroxidase [imported] - Arabido 0.942 1.0 0.671 1e-133
297824329335 hypothetical protein ARALYDRAFT_483456 [ 0.956 0.985 0.646 1e-130
225434008340 PREDICTED: probable peroxidase 61 [Vitis 0.950 0.964 0.662 1e-125
147822746364 hypothetical protein VITISV_006615 [Viti 0.950 0.901 0.656 1e-125
356557012338 PREDICTED: probable peroxidase 26-like [ 0.936 0.955 0.648 1e-118
>gi|15237884|ref|NP_197795.1| peroxidase [Arabidopsis thaliana] gi|26397805|sp|Q9FLV5.1|PER61_ARATH RecName: Full=Probable peroxidase 61; Short=Atperox P61; Flags: Precursor gi|9758231|dbj|BAB08730.1| peroxidase-like protein [Arabidopsis thaliana] gi|332005870|gb|AED93253.1| peroxidase [Arabidopsis thaliana] Back     alignment and taxonomy information
 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 242/337 (71%), Positives = 278/337 (82%), Gaps = 3/337 (0%)

Query: 6   RFVMILPLLALALSLFVANA--DAAVSLPQPVKLEWHYYKVHNTCDDAEAYIRHQVELFY 63
           +FV   PLLAL +      A  +AA  L  PVKL WHYYK+ NTCDDAE YIR+QVE FY
Sbjct: 2   QFVNFFPLLALVVISLAGKATVEAATGLNPPVKLVWHYYKLTNTCDDAETYIRYQVEKFY 61

Query: 64  KHDKTIAPKLLRLLYSDCFVTGCDASILLDRPNSEKTAPQNWGLGAFVLIDKIKVVLEQR 123
           K+D +IAPKLLRLLYSDC V GCD SILL  PNSE+TAPQN GLG FV+IDKIK VLE R
Sbjct: 62  KNDSSIAPKLLRLLYSDCMVNGCDGSILLQGPNSERTAPQNRGLGGFVIIDKIKQVLESR 121

Query: 124 CPGAVSCSDILNLATRDAVHMAGAPSYPVFTGRRDGMTSTKESVDLPSPSISWKESLACF 183
           CPG VSC+DILNLATRDAVHMAGAPSYPVFTGRRDG T   ++VDLPSPSIS  ESLA F
Sbjct: 122 CPGVVSCADILNLATRDAVHMAGAPSYPVFTGRRDGGTLNADAVDLPSPSISVDESLAYF 181

Query: 184 QSKGLDVQDMVTLLGAHTMGQTRCRYIVDRLYNYKNTGKPDPSMNTTLLNRLRKECPPRT 243
           +SKGLDV DM TLLGAH+MG+T C Y+VDRLYN+KNTGKPDP+MNTTL+++LR  CPPRT
Sbjct: 182 KSKGLDVLDMTTLLGAHSMGKTHCSYVVDRLYNFKNTGKPDPTMNTTLVSQLRYLCPPRT 241

Query: 244 RKGQSDPLVYLNPETGSSYRFSESYYSRVKTHEAVLGVDQQLSNGDNNTLQIVDEFAAGF 303
           +KGQ+DPLVYLNP++GSS RF+ SYYSRV +H AVL VDQ+L N D++  +I  EFA+GF
Sbjct: 242 QKGQTDPLVYLNPDSGSSNRFTSSYYSRVLSHNAVLRVDQELLNNDDSK-EITQEFASGF 300

Query: 304 EDFRKALALSMSRMGSINVLTGKQGEIRRNCRCTNAD 340
           EDFRK+ AL+MSRMGSINVLTG  GEIRR+CR TNA+
Sbjct: 301 EDFRKSFALAMSRMGSINVLTGTAGEIRRDCRVTNAN 337

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297812563|ref|XP_002874165.1| peroxidase family protein [Arabidopsis lyrata subsp. lyrata] gi|297320002|gb|EFH50424.1| peroxidase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224095650|ref|XP_002310424.1| predicted protein [Populus trichocarpa] gi|222853327|gb|EEE90874.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|30689391|ref|NP_181876.2| peroxidase [Arabidopsis thaliana] gi|25453188|sp|O22862.2|PER26_ARATH RecName: Full=Probable peroxidase 26; Short=Atperox P26; AltName: Full=ATP50; Flags: Precursor gi|330255181|gb|AEC10275.1| peroxidase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|19310389|gb|AAL84934.1| At2g43480/T1O24.22 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|25285613|pir||F84866 probable peroxidase [imported] - Arabidopsis thaliana gi|2288998|gb|AAB64327.1| putative peroxidase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297824329|ref|XP_002880047.1| hypothetical protein ARALYDRAFT_483456 [Arabidopsis lyrata subsp. lyrata] gi|297325886|gb|EFH56306.1| hypothetical protein ARALYDRAFT_483456 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|225434008|ref|XP_002272039.1| PREDICTED: probable peroxidase 61 [Vitis vinifera] gi|296081338|emb|CBI17684.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147822746|emb|CAN61767.1| hypothetical protein VITISV_006615 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356557012|ref|XP_003546812.1| PREDICTED: probable peroxidase 26-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query345
TAIR|locus:2178682340 AT5G24070 [Arabidopsis thalian 0.910 0.923 0.714 5.2e-120
TAIR|locus:2058208335 AT2G43480 [Arabidopsis thalian 0.904 0.931 0.667 1.9e-115
TAIR|locus:2175951313 AT5G17820 [Arabidopsis thalian 0.811 0.894 0.428 1.4e-55
TAIR|locus:2096419321 AT3G03670 [Arabidopsis thalian 0.866 0.931 0.411 1.3e-54
TAIR|locus:2097273352 AT3G32980 [Arabidopsis thalian 0.843 0.826 0.4 6.3e-53
TAIR|locus:2176402331 RHS18 "root hair specific 18" 0.840 0.876 0.41 6.3e-53
TAIR|locus:2170214358 AT5G06730 [Arabidopsis thalian 0.843 0.812 0.389 9.5e-50
TAIR|locus:2101298354 PRXCA "peroxidase CA" [Arabido 0.840 0.819 0.388 1.5e-49
TAIR|locus:2170204335 PA2 "peroxidase 2" [Arabidopsi 0.831 0.856 0.394 1.5e-49
TAIR|locus:2138273346 Prx37 "peroxidase 37" [Arabido 0.785 0.783 0.407 8.5e-49
TAIR|locus:2178682 AT5G24070 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1181 (420.8 bits), Expect = 5.2e-120, P = 5.2e-120
 Identities = 225/315 (71%), Positives = 258/315 (81%)

Query:    26 DAAVSLPQPVKLEWHYYKVHNTCDDAEAYIRHQVELFYKHDKTIAPKLLRLLYSDCFVTG 85
             +AA  L  PVKL WHYYK+ NTCDDAE YIR+QVE FYK+D +IAPKLLRLLYSDC V G
Sbjct:    24 EAATGLNPPVKLVWHYYKLTNTCDDAETYIRYQVEKFYKNDSSIAPKLLRLLYSDCMVNG 83

Query:    86 CDASILLDRPNSEKTAPQNWGLGAFVLIDKIKVVLEQRCPGAVSCSDILNLATRDAVHMA 145
             CD SILL  PNSE+TAPQN GLG FV+IDKIK VLE RCPG VSC+DILNLATRDAVHMA
Sbjct:    84 CDGSILLQGPNSERTAPQNRGLGGFVIIDKIKQVLESRCPGVVSCADILNLATRDAVHMA 143

Query:   146 GAPSYPVFTGRRDGMTSTKESVDLPSPSISWKESLACFQSKGLDVQDMVTLLGAHTMGQT 205
             GAPSYPVFTGRRDG T   ++VDLPSPSIS  ESLA F+SKGLDV DM TLLGAH+MG+T
Sbjct:   144 GAPSYPVFTGRRDGGTLNADAVDLPSPSISVDESLAYFKSKGLDVLDMTTLLGAHSMGKT 203

Query:   206 RCRYIVDRLYNYKNTGKPDPSMNTTLLNRLRKECPPRTRKGQSDPLVYLNPETGXXXXXX 265
              C Y+VDRLYN+KNTGKPDP+MNTTL+++LR  CPPRT+KGQ+DPLVYLNP++G      
Sbjct:   204 HCSYVVDRLYNFKNTGKPDPTMNTTLVSQLRYLCPPRTQKGQTDPLVYLNPDSGSSNRFT 263

Query:   266 XXXXXXVKTHEAVLGVDQQLSNGDNNTLQIVDEFAAGFEDFRKALALSMSRMGSINVLTG 325
                   V +H AVL VDQ+L N D++  +I  EFA+GFEDFRK+ AL+MSRMGSINVLTG
Sbjct:   264 SSYYSRVLSHNAVLRVDQELLNNDDSK-EITQEFASGFEDFRKSFALAMSRMGSINVLTG 322

Query:   326 KQGEIRRNCRCTNAD 340
               GEIRR+CR TNA+
Sbjct:   323 TAGEIRRDCRVTNAN 337
GO:0004601 "peroxidase activity" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006979 "response to oxidative stress" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2058208 AT2G43480 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2175951 AT5G17820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2096419 AT3G03670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2097273 AT3G32980 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2176402 RHS18 "root hair specific 18" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170214 AT5G06730 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2101298 PRXCA "peroxidase CA" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170204 PA2 "peroxidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138273 Prx37 "peroxidase 37" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FLV5PER61_ARATH1, ., 1, 1, ., 1, ., 70.71810.96810.9823yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.11.1.70.824
3rd Layer1.11.10.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
PER61
peroxidase family protein; peroxidase family protein; FUNCTIONS IN- electron carrier activity, peroxidase activity, heme binding; INVOLVED IN- response to oxidative stress; LOCATED IN- endomembrane system; EXPRESSED IN- root; CONTAINS InterPro DOMAIN/s- Haem peroxidase (InterPro-IPR010255), Plant peroxidase (InterPro-IPR000823), Haem peroxidase, plant/fungal/bacterial (InterPro-IPR002016); BEST Arabidopsis thaliana protein match is- peroxidase, putative (TAIR-AT2G43480.1); Has 2555 Blast hits to 2543 proteins in 158 species- Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 40; Plants - 2 [...] (340 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT5G46550
DNA-binding bromodomain-containing protein; DNA-binding bromodomain-containing protein; FUNCTIO [...] (494 aa)
      • 0.921
UGT72E2
UGT72E2; UDP-glycosyltransferase/ coniferyl-alcohol glucosyltransferase/ transferase, transferr [...] (481 aa)
     •  0.899
AT5G53970
aminotransferase, putative; encodes tyrosine aminotransferase which is strongly induced upon ag [...] (414 aa)
     •  0.899
AT5G36160
aminotransferase-related; aminotransferase-related; FUNCTIONS IN- 1-aminocyclopropane-1-carboxy [...] (420 aa)
     •  0.899
UGT72E3
UGT72E3; UDP-glycosyltransferase/ coniferyl-alcohol glucosyltransferase/ transferase, transferr [...] (481 aa)
     •  0.899
ASP2
ASP2 (ASPARTATE AMINOTRANSFERASE 2); L-aspartate-2-oxoglutarate aminotransferase; Nitrogen meta [...] (405 aa)
     •  0.899
ASP3
ASP3 (ASPARTATE AMINOTRANSFERASE 3); L-aspartate-2-oxoglutarate aminotransferase; Encodes the c [...] (449 aa)
     •  0.899
HPA1
HPA1 (HISTIDINOL PHOSPHATE AMINOTRANSFERASE 1); histidinol-phosphate transaminase; Encodes hist [...] (417 aa)
     •  0.899
AT5G04330
cytochrome P450, putative / ferulate-5-hydroxylase, putative; cytochrome P450, putative / ferul [...] (512 aa)
     •  0.899
PAL3
PAL3 (PHENYL ALANINE AMMONIA-LYASE 3); phenylalanine ammonia-lyase; Member of Phenylalanine amm [...] (694 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query345
cd00693298 cd00693, secretory_peroxidase, Horseradish peroxid 1e-133
PLN03030324 PLN03030, PLN03030, cationic peroxidase; Provision 6e-74
pfam00141180 pfam00141, peroxidase, Peroxidase 1e-56
cd00314255 cd00314, plant_peroxidase_like, Heme-dependent per 3e-15
cd00691253 cd00691, ascorbate_peroxidase, Ascorbate peroxidas 6e-06
cd00692328 cd00692, ligninase, Ligninase and other manganese- 9e-06
PLN02608289 PLN02608, PLN02608, L-ascorbate peroxidase 2e-05
cd08201264 cd08201, plant_peroxidase_like_1, Uncharacterized 2e-04
PLN02879251 PLN02879, PLN02879, L-ascorbate peroxidase 0.001
PLN02364250 PLN02364, PLN02364, L-ascorbate peroxidase 1 0.001
>gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information 
 Score =  381 bits (981), Expect = e-133
 Identities = 142/304 (46%), Positives = 181/304 (59%), Gaps = 12/304 (3%)

Query: 36  KLEWHYYKVHNTCDDAEAYIRHQVELFYKHDKTIAPKLLRLLYSDCFVTGCDASILLD-- 93
           +L   +Y    +C +AE+ +R  V    K D  +A  LLRL + DCFV GCDAS+LLD  
Sbjct: 1   QLSVGFY--SKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDST 58

Query: 94  -RPNSEKTAPQNWGLGAFVLIDKIKVVLEQRCPGAVSCSDILNLATRDAVHMAGAPSYPV 152
               SEK AP N  L  F +ID IK  LE  CPG VSC+DIL LA RDAV +AG PSY V
Sbjct: 59  ANNTSEKDAPPNLSLRGFDVIDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEV 118

Query: 153 FTGRRDGMTSTKESV-DLPSPSISWKESLACFQSKGLDVQDMVTLLGAHTMGQTRCRYIV 211
             GRRDG  S+   V +LPSP  S  + ++ F SKGL V D+V L GAHT+G+  C    
Sbjct: 119 PLGRRDGRVSSANDVGNLPSPFFSVSQLISLFASKGLTVTDLVALSGAHTIGRAHCSSFS 178

Query: 212 DRLYNYKNTGKPDPSMNTTLLNRLRKECPPRTRKGQSDPLVYLNPETGSSYRFSESYYSR 271
           DRLYN+  TG PDP+++     +LRK+CP     G  D LV L+P  G+   F  SYY  
Sbjct: 179 DRLYNFSGTGDPDPTLDPAYAAQLRKKCPA---GGDDDTLVPLDP--GTPNTFDNSYYKN 233

Query: 272 VKTHEAVLGVDQQLSNGDNNTLQIVDEFAAGFEDFRKALALSMSRMGSINVLTGKQGEIR 331
           +     +L  DQ L + D  T  IV+ +AA  + F +  A +M +MG+I VLTG QGEIR
Sbjct: 234 LLAGRGLLTSDQALLS-DPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIR 292

Query: 332 RNCR 335
           +NCR
Sbjct: 293 KNCR 296

Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. Length = 298
>gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>gnl|CDD|173825 cd00691, ascorbate_peroxidase, Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>gnl|CDD|173826 cd00692, ligninase, Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>gnl|CDD|178218 PLN02608, PLN02608, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|173829 cd08201, plant_peroxidase_like_1, Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>gnl|CDD|178467 PLN02879, PLN02879, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|166005 PLN02364, PLN02364, L-ascorbate peroxidase 1 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 345
PLN03030324 cationic peroxidase; Provisional 100.0
cd00693298 secretory_peroxidase Horseradish peroxidase and re 100.0
PF00141230 peroxidase: Peroxidase; InterPro: IPR002016 Peroxi 100.0
PLN02608289 L-ascorbate peroxidase 100.0
PLN02364250 L-ascorbate peroxidase 1 100.0
cd00691253 ascorbate_peroxidase Ascorbate peroxidases and cyt 100.0
cd00692328 ligninase Ligninase and other manganese-dependent 100.0
PLN02879251 L-ascorbate peroxidase 100.0
cd00314255 plant_peroxidase_like Heme-dependent peroxidases s 100.0
cd00649409 catalase_peroxidase_1 N-terminal catalytic domain 100.0
TIGR00198 716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061 726 catalase/hydroperoxidase HPI(I); Provisional 100.0
cd08201264 plant_peroxidase_like_1 Uncharacterized family of 100.0
cd08200297 catalase_peroxidase_2 C-terminal non-catalytic dom 100.0
TIGR00198716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061726 catalase/hydroperoxidase HPI(I); Provisional 100.0
COG0376 730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.97
COG0376730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.39
>PLN03030 cationic peroxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=6.3e-107  Score=781.39  Aligned_cols=299  Identities=41%  Similarity=0.681  Sum_probs=284.7

Q ss_pred             CCCCCCCccccCCCCCChhHHHHHHHHHHHHHhcCCCccchhhhhhhccccCCCCCceeeccCCCcccCCCCCCCCchhH
Q 045265           32 PQPVKLEWHYYKVHNTCDDAEAYIRHQVELFYKHDKTIAPKLLRLLYSDCFVTGCDASILLDRPNSEKTAPQNWGLGAFV  111 (345)
Q Consensus        32 ~~~~~l~~~fY~~~~sCp~~e~iV~~~v~~~~~~d~~~a~~llRL~FHDcfv~GcDgSill~~~~~E~~~~~N~~l~g~~  111 (345)
                      ++.++|+++||+  +|||++|+||+++|++.+.+|++++|++|||+||||||+||||||||+++..||++++|.+|+||+
T Consensus        20 ~~~~~L~~~fY~--~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~~~Ek~a~~N~~l~Gf~   97 (324)
T PLN03030         20 VQGQGTRVGFYS--TTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGSNTEKTALPNLLLRGYD   97 (324)
T ss_pred             chhccCccchhh--CcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCCcccccCCCCcCcchHH
Confidence            455679999999  999999999999999999999999999999999999999999999999766899999999999999


Q ss_pred             HHHHHHHHHHhhCCCCCchhhHHhhhchhhhhcCCCCcccccCCCCCCCCCCCCCC-CCCCCCCCHHHHHHHHHHCCCCc
Q 045265          112 LIDKIKVVLEQRCPGAVSCSDILNLATRDAVHMAGAPSYPVFTGRRDGMTSTKESV-DLPSPSISWKESLACFQSKGLDV  190 (345)
Q Consensus       112 ~I~~iK~~le~~cp~~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~-~lP~p~~~~~~l~~~F~~~Glt~  190 (345)
                      +|+.||++||++||++|||||||||||||||+++|||.|+|++||||+++|.+.++ +||.|+.++++|++.|+++||+.
T Consensus        98 ~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~~LP~p~~~~~~l~~~F~~~Gl~~  177 (324)
T PLN03030         98 VIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDASNLPGFTDSIDVQKQKFAAKGLNT  177 (324)
T ss_pred             HHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCcccccCCcCCCCCHHHHHHHHHHcCCCH
Confidence            99999999999999999999999999999999999999999999999999887777 89999999999999999999999


Q ss_pred             cchhhhcccccccccccccccccccccCCCC-CCCCCCCHHHHHHHhccCCCCCCCCCCCCcccCCCCCCCCcccchHHH
Q 045265          191 QDMVTLLGAHTMGQTRCRYIVDRLYNYKNTG-KPDPSMNTTLLNRLRKECPPRTRKGQSDPLVYLNPETGSSYRFSESYY  269 (345)
Q Consensus       191 ~elVaLsGaHTiG~ahc~~f~~Rl~~f~g~~-~~dp~~d~~y~~~L~~~Cp~~~~~~~~~~~~~~~lD~~tp~~FDn~Yy  269 (345)
                      +|||+||||||||++||.+|.+|||||.+++ .+||+|||.|++.|++.||..+  +++   ..+++|+.||.+|||+||
T Consensus       178 ~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~--~~~---~~~~lD~~Tp~~FDn~Yy  252 (324)
T PLN03030        178 QDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNG--DGS---RRIALDTGSSNRFDASFF  252 (324)
T ss_pred             HHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCC--CCC---ccccCCCCCCcccccHHH
Confidence            9999999999999999999999999999875 5899999999999999999633  222   357899999999999999


Q ss_pred             HHhhccccccchhhhhccCCcchHHHHHHHhhCH----HHHHHHHHHHHHHhhcCCCCCCCCCcccccccccC
Q 045265          270 SRVKTHEAVLGVDQQLSNGDNNTLQIVDEFAAGF----EDFRKALALSMSRMGSINVLTGKQGEIRRNCRCTN  338 (345)
Q Consensus       270 ~~l~~~~glL~SD~~L~~~d~~t~~~V~~yA~d~----~~F~~~Fa~Am~Km~~lgv~tG~~GeIR~~C~~~n  338 (345)
                      +||++++|+|+|||+|+ .|++|+++|++||.|+    +.|+++|++||+|||+|+|+||.+|||||+|+++|
T Consensus       253 ~nll~~rGlL~SDq~L~-~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN  324 (324)
T PLN03030        253 SNLKNGRGILESDQKLW-TDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN  324 (324)
T ss_pred             HHHHhcCCCcCCchHhh-cCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence            99999999999999999 9999999999999875    59999999999999999999999999999999998

>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information
>PLN02608 L-ascorbate peroxidase Back     alignment and domain information
>PLN02364 L-ascorbate peroxidase 1 Back     alignment and domain information
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>PLN02879 L-ascorbate peroxidase Back     alignment and domain information
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query345
1pa2_A306 Arabidopsis Thaliana Peroxidase A2 Length = 306 3e-54
3atj_A309 Heme Ligand Mutant Of Recombinant Horseradish Perox 4e-51
4atj_A309 Distal Heme Pocket Mutant (H42e) Of Recombinant Hor 5e-51
6atj_A308 Recombinant Horseradish Peroxidase C Complex With F 6e-51
1w4w_A323 Ferric Horseradish Peroxidase C1a In Complex With F 6e-51
2atj_A308 Recombinant Horseradish Peroxidase Complex With Ben 7e-51
2ylj_A306 Horse Radish Peroxidase, Mutant S167y Length = 306 7e-51
1gwo_A309 Recombinant Horseradish Peroxidase C1a Ala170gln Le 8e-51
1gwu_A309 Recombinant Horseradish Peroxidase C1a Ala140gly Le 9e-51
1atj_A306 Recombinant Horseradish Peroxidase C1a Length = 306 1e-50
1gw2_A308 Recombinant Horseradish Peroxidase C1a Thr171ser In 2e-50
1gx2_A309 Recombinant Horseradish Peroxidase Phe209ser Comple 3e-50
1kzm_A308 Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan 3e-50
4a5g_A308 Raphanus Sativus Anionic Peroxidase. Length = 308 8e-50
1qgj_A300 Arabidopsis Thaliana Peroxidase N Length = 300 1e-47
1fhf_A304 The Structure Of Soybean Peroxidase Length = 304 1e-44
1bgp_A309 Crystal Structure Of Barley Grain Peroxidase 1 Leng 4e-42
1sch_A294 Peanut Peroxidase Length = 294 1e-41
3hdl_A304 Crystal Structure Of Highly Glycosylated Peroxidase 1e-40
3riw_A271 The Crystal Structure Of Leishmania Major Peroxidas 3e-05
4ged_A268 Crystal Structure Of The Leishmania Major Peroxidas 1e-04
3riv_A271 The Crystal Structure Of Leishmania Major Peroxidas 2e-04
1iyn_A295 Crystal Structure Of Chloroplastic Ascorbate Peroxi 5e-04
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306 Back     alignment and structure 
Iteration: 1

 Score =  209 bits (531), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 120/312 (38%), Positives = 174/312 (55%), Gaps = 14/312 (4%)
Query: 35  VKLEWHYYKVHNTCDDAEAYIRHQVELFYKHDKTIAPKLLRLLYSDCFVTGCDASILLDR 94
           ++L   +Y    TC +A A +R  ++   + D  I   L+RL + DCFV GCDASILLD 
Sbjct: 1   MQLNATFYS--GTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDD 58
Query: 95  PNS---EKTAPQNWGLG-AFVLIDKIKVVLEQRCPGAVSCSDILNLATRDAVHMAGAPSY 150
             S   EK A  N      F ++D IK  LE  CPG VSCSD+L LA+  +V +AG PS+
Sbjct: 59  TGSIQSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSW 118
Query: 151 PVFTGRRDGMTSTKESVD--LPSPSISWKESLACFQSKGLDVQDMVTLLGAHTMGQTRCR 208
            V  GRRD +T+     +  +PSP  S       F + GL+  D+V L GAHT G+ RC 
Sbjct: 119 TVLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARCG 178
Query: 209 YIVDRLYNYKNTGKPDPSMNTTLLNRLRKECPPRTRKGQSDPLVYLNPETGXXXXXXXXX 268
              +RL+N+  TG PDP++N+TLL+ L++ CP   + G +  +  L+  T          
Sbjct: 179 VFNNRLFNFSGTGNPDPTLNSTLLSTLQQLCP---QNGSASTITNLDLST--PDAFDNNY 233
Query: 269 XXXVKTHEAVLGVDQQL-SNGDNNTLQIVDEFAAGFEDFRKALALSMSRMGSINVLTGKQ 327
              +++++ +L  DQ+L S   ++T+ IV  FA+    F +A A SM  MG+I+ LTG  
Sbjct: 234 FANLQSNDGLLQSDQELFSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSN 293
Query: 328 GEIRRNCRCTNA 339
           GEIR +C+  N 
Sbjct: 294 GEIRLDCKKVNG 305
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323 Back     alignment and structure
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308 Back     alignment and structure
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306 Back     alignment and structure
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309 Back     alignment and structure
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309 Back     alignment and structure
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306 Back     alignment and structure
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308 Back     alignment and structure
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308 Back     alignment and structure
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N Length = 300 Back     alignment and structure
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304 Back     alignment and structure
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 Length = 309 Back     alignment and structure
>pdb|1SCH|A Chain A, Peanut Peroxidase Length = 294 Back     alignment and structure
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree Length = 304 Back     alignment and structure
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Mutant C197t Length = 271 Back     alignment and structure
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major Peroxidase-Cytochrome C Complex Length = 268 Back     alignment and structure
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Length = 271 Back     alignment and structure
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability Length = 295 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query345
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 1e-119
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 1e-118
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 1e-117
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 1e-117
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 1e-116
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 1e-111
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 1e-110
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 1e-52
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 4e-46
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 5e-46
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 2e-42
2e39_A344 Peroxidase; heme protein, coordination geometry of 2e-40
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 2e-37
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 6e-37
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 2e-11
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 4e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304 Back     alignment and structure
 Score =  344 bits (885), Expect = e-119
 Identities = 112/311 (36%), Positives = 165/311 (53%), Gaps = 14/311 (4%)

Query: 36  KLEWHYYKVHNTCDDAEAYIRHQVELFYKHDKTIAPKLLRLLYSDCFVTGCDASILLDRP 95
           +L   +Y+   TC +    +   +      D  I   L+RL + DCFV GCD S+LL+  
Sbjct: 1   QLTPTFYR--ETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNT 58

Query: 96  N---SEKTAPQNWG-LGAFVLIDKIKVVLEQRCPGAVSCSDILNLATRDAVHMAGAPSYP 151
           +   SE+ A  N   +    +++ IK  +E  CP  VSC+DIL +A   A  + G P +P
Sbjct: 59  DTIESEQDALPNINSIRGLDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWP 118

Query: 152 VFTGRRDGMTSTKESV--DLPSPSISWKESLACFQSKGLDVQDMVTLLGAHTMGQTRCRY 209
           V  GRRD +T+ +     +LP+P  +  +  A F  +GL+  D+VTL G HT G+ RC  
Sbjct: 119 VPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSGGHTFGRARCST 178

Query: 210 IVDRLYNYKNTGKPDPSMNTTLLNRLRKECPPRTRKGQSDPLVYLNPETGSSYRFSESYY 269
            ++RLYN+ NTG PDP++NTT L  LR  CP   +    D L  L+    +  +F   YY
Sbjct: 179 FINRLYNFSNTGNPDPTLNTTYLEVLRARCP---QNATGDNLTNLDL--STPDQFDNRYY 233

Query: 270 SRVKTHEAVLGVDQQL-SNGDNNTLQIVDEFAAGFEDFRKALALSMSRMGSINVLTGKQG 328
           S +     +L  DQ+L S    +T+ IV+ F++    F     +SM +MG+I VLTG +G
Sbjct: 234 SNLLQLNGLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEG 293

Query: 329 EIRRNCRCTNA 339
           EIR  C   N 
Sbjct: 294 EIRLQCNFVNG 304
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306 Back     alignment and structure
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} PDB: 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* 1mk8_A* 1mkq_A* ... Length = 294 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query345
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 100.0
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 100.0
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 100.0
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 100.0
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 100.0
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 100.0
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 100.0
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 100.0
2e39_A344 Peroxidase; heme protein, coordination geometry of 100.0
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 100.0
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 100.0
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 100.0
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 100.0
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 100.0
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 100.0
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 100.0
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
1u2k_A309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 100.0
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 100.0
2cca_A740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
1itk_A731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3vli_A737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3n3r_A748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3ut2_A764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 Back     alignment and structure
Probab=100.00  E-value=4e-108  Score=786.60  Aligned_cols=295  Identities=36%  Similarity=0.640  Sum_probs=284.6

Q ss_pred             CCccccCCCCCChhHHHHHHHHHHHHHhcCCCccchhhhhhhccccCCCCCceeeccCCC---cccCCCCCC-CCchhHH
Q 045265           37 LEWHYYKVHNTCDDAEAYIRHQVELFYKHDKTIAPKLLRLLYSDCFVTGCDASILLDRPN---SEKTAPQNW-GLGAFVL  112 (345)
Q Consensus        37 l~~~fY~~~~sCp~~e~iV~~~v~~~~~~d~~~a~~llRL~FHDcfv~GcDgSill~~~~---~E~~~~~N~-~l~g~~~  112 (345)
                      |+++||+  +|||++|+|||++|++++.+|++++|++||||||||||+||||||||++++   +|+++++|. +|+|||+
T Consensus         2 L~~~fY~--~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSiLld~t~~~~~Ek~~~~N~~~lrgf~v   79 (304)
T 3hdl_A            2 LQIGFYN--TSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANNTAEKDAIPNNPSLRGFEV   79 (304)
T ss_dssp             CEETTTT--TTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTSSSSGGGCCCBTTBCCGGGSTTTTTTCCCHHH
T ss_pred             CccChhh--CcCcCHHHHHHHHHHHHHHhCCcchHHHHHHheecccCCCCCeeeeecCCCCCcccccCCCcccchHHHHH
Confidence            7899999  999999999999999999999999999999999999999999999999864   799999998 8999999


Q ss_pred             HHHHHHHHHhhCCCCCchhhHHhhhchhhhhcCCCCcccccCCCCCCCCCCCCCC--CCCCCCCCHHHHHHHHHHCCCCc
Q 045265          113 IDKIKVVLEQRCPGAVSCSDILNLATRDAVHMAGAPSYPVFTGRRDGMTSTKESV--DLPSPSISWKESLACFQSKGLDV  190 (345)
Q Consensus       113 I~~iK~~le~~cp~~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~--~lP~p~~~~~~l~~~F~~~Glt~  190 (345)
                      ||+||++||++||++||||||||||||+||+++|||.|+|++||+|++++.+..+  +||+|+.++++|++.|++|||++
T Consensus        80 id~iK~~le~~Cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~  159 (304)
T 3hdl_A           80 ITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTA  159 (304)
T ss_dssp             HHHHHHHHHHHSTTTSCHHHHHHHHHHHHHHHHHCCCCCCEECCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHTTTCCH
T ss_pred             HHHHHHHHHhhCCCCccHHHHHHHHHhhhhhccCCCccccccCccCCCCCCccccccCCCCCCCCHHHHHHHHHHcCCCH
Confidence            9999999999999999999999999999999999999999999999999988765  79999999999999999999999


Q ss_pred             cchhhhcccccccccccccccccccccCCCCCCCCCCCHHHHHHHhccCCCCCCCC--CCCCcccCCCCCCCCcccchHH
Q 045265          191 QDMVTLLGAHTMGQTRCRYIVDRLYNYKNTGKPDPSMNTTLLNRLRKECPPRTRKG--QSDPLVYLNPETGSSYRFSESY  268 (345)
Q Consensus       191 ~elVaLsGaHTiG~ahc~~f~~Rl~~f~g~~~~dp~~d~~y~~~L~~~Cp~~~~~~--~~~~~~~~~lD~~tp~~FDn~Y  268 (345)
                      +||||||||||||++||.+|.+|||||+|++.+||+||+.|++.|++.||..+  +  ++   +.++||+.||.+|||+|
T Consensus       160 ~d~VaLsGaHTiG~ahC~~f~~Rly~f~~~~~~DP~ld~~~a~~L~~~Cp~~~--~~~~~---~~~~lD~~TP~~FDN~Y  234 (304)
T 3hdl_A          160 DEMVTLSGAHSIGVAHCSSFTNRLYNFNSGSGIDPTLSPSYAALLRNTCPANS--TRFTP---ITVSLDIITPSVLDNMY  234 (304)
T ss_dssp             HHHHHHGGGGGSSEEEGGGTGGGTSSCSSSSSSCTTSCHHHHHHHHHHSCTTC--CTTSC---CEEESCSSSTTSCSTHH
T ss_pred             HHhhhhhccccccccccchhhhhhcccCCCCCCCCcccHHHHHHHhccCCCCC--CCCCc---cccCCCCCCcccccHHH
Confidence            99999999999999999999999999999888999999999999999999765  3  33   57889999999999999


Q ss_pred             HHHhhccccccchhhhhccCCcchHHHHHHHhhCHHHHHHHHHHHHHHhhcCCCCCCCCCcccccccccCC
Q 045265          269 YSRVKTHEAVLGVDQQLSNGDNNTLQIVDEFAAGFEDFRKALALSMSRMGSINVLTGKQGEIRRNCRCTNA  339 (345)
Q Consensus       269 y~~l~~~~glL~SD~~L~~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tG~~GeIR~~C~~~n~  339 (345)
                      |+||+.++|||+|||+|+ .|++|+++|++||.|+++|+++|++||+||++|+|+||.+||||++|+++|+
T Consensus       235 y~nL~~~~glL~SDq~L~-~d~~t~~~V~~yA~~~~~F~~~Fa~AmvKmg~igv~tg~~GeIR~~C~~~N~  304 (304)
T 3hdl_A          235 YTGVQLTLGLLTSDQALV-TEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTNCSVVNS  304 (304)
T ss_dssp             HHHHHTTCCCSHHHHGGG-SSHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCC-
T ss_pred             HHHHHhCcCCCCCCHHHh-cCccHHHHHHHhccCHHHHHHHHHHHHHHHHhcCCCCCCCCeeeCCccccCC
Confidence            999999999999999999 9999999999999999999999999999999999999999999999999993
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 345
d1qgja_300 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 2e-91
d1fhfa_304 a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m 4e-91
d1pa2a_306 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 2e-89
d1gwua_307 a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor 6e-86
d1bgpa_309 a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu 9e-82
d1scha_294 a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy 1e-79
d1yyda1357 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { 1e-46
d1llpa_343 a.93.1.1 (A:) Fungal peroxidase (ligninase) {White 2e-42
d2e39a1336 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { 2e-40
d2euta1291 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B 2e-31
d1iyna_275 a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco 7e-29
d1oafa_250 a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glyci 2e-24
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]

 Score =  273 bits (700), Expect = 2e-91
 Identities = 111/307 (36%), Positives = 166/307 (54%), Gaps = 14/307 (4%)

Query: 37  LEWHYYKVHNTCDDAEAYIRHQVELFYKHDKTIAPKLLRLLYSDCFVTGCDASILLDRPN 96
           L    Y    +C +    +R QV +  K +  +A  L+RL + DCFV GCDAS+LLD  +
Sbjct: 2   LSPDIYA--KSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGAD 59

Query: 97  SEKTAPQNWGLG-AFVLIDKIKVVLEQRCPGAVSCSDILNLATRDAVHMAGAPSYPVFTG 155
           SEK A  N      F +ID IK  +E  CPG VSC+DIL LA RD+V ++G P + V  G
Sbjct: 60  SEKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALG 119

Query: 156 RRDGMTSTKESVD-LPSPSISWKESLACFQSKGLDVQDMVTLLGAHTMGQTRCRYIVDRL 214
           R+DG+ + + S + LPSP       +A F +  L++ D+V L GAHT GQ +C    +RL
Sbjct: 120 RKDGLVANQNSANNLPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCAVFSNRL 179

Query: 215 YNYKNTGKPDPSMNTTLLNRLRKECPPRTRKGQSDPLVYLNPETGSSYRFSESYYSRVKT 274
           +N+   G PD ++ T+LL+ L+  CP     G S+       +  ++  F  +Y+  +  
Sbjct: 180 FNFTGAGNPDATLETSLLSNLQTVCP---LGGNSNITA--PLDRSTTDTFDNNYFKNLLE 234

Query: 275 HEAVLGVDQQLSNGD---NNTLQIVDEFAAGFEDFRKALALSMSRMGSINVLTGKQGEIR 331
            + +L  DQ L + D   N T ++V+ ++     F +    +M RMG  N+  G  GE+R
Sbjct: 235 GKGLLSSDQILFSSDLAVNTTKKLVEAYSRSQSLFFRDFTCAMIRMG--NISNGASGEVR 292

Query: 332 RNCRCTN 338
            NCR  N
Sbjct: 293 TNCRVIN 299
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 Back     information, alignment and structure
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291 Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 250 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query345
d1fhfa_304 Plant peroxidase {Soybean (Glycine max) [TaxId: 38 100.0
d1pa2a_306 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1qgja_300 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1gwua_307 Plant peroxidase {Horseradish (Armoracia rusticana 100.0
d1bgpa_309 Plant peroxidase {Barley (Hordeum vulgare), peroxi 100.0
d1scha_294 Plant peroxidase {Peanut (Arachis hypogaea) [TaxId 100.0
d1iyna_275 Ascorbate peroxidase {Common tobacco (Nicotiana ta 100.0
d1yyda1357 Fungal peroxidase (ligninase) {Basidomycetos fungu 100.0
d2e39a1336 Fungal peroxidase (ligninase) {Arthromyces ramosus 100.0
d1llpa_343 Fungal peroxidase (ligninase) {White rot basidiomy 100.0
d1oafa_250 Ascorbate peroxidase {Soybean (Glycine max) [TaxId 100.0
d2euta1291 Cytochrome c peroxidase, CCP {Baker's yeast (Sacch 100.0
d1mwva2308 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1itka1406 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1mwva1406 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1u2ka_292 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1itka2308 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1ub2a2294 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d2ccaa1410 Catalase-peroxidase KatG {Mycobacterium tuberculos 100.0
d1ub2a1406 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d2ccaa2285 Catalase-peroxidase KatG {Mycobacterium tuberculos 99.98
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=2.4e-102  Score=746.68  Aligned_cols=296  Identities=37%  Similarity=0.672  Sum_probs=284.3

Q ss_pred             CCCccccCCCCCChhHHHHHHHHHHHHHhcCCCccchhhhhhhccccCCCCCceeeccCCC---cccCCCCCCC-CchhH
Q 045265           36 KLEWHYYKVHNTCDDAEAYIRHQVELFYKHDKTIAPKLLRLLYSDCFVTGCDASILLDRPN---SEKTAPQNWG-LGAFV  111 (345)
Q Consensus        36 ~l~~~fY~~~~sCp~~e~iV~~~v~~~~~~d~~~a~~llRL~FHDcfv~GcDgSill~~~~---~E~~~~~N~~-l~g~~  111 (345)
                      ||+.+||+  +|||++|+||+++|++.+.+|++++|++|||+||||||+||||||||++++   +|+++++|.+ ++||+
T Consensus         1 qL~~~~Y~--~sCp~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSill~~~~~~~~E~~~~~N~~~~~g~~   78 (304)
T d1fhfa_           1 QLTPTFYR--ETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIESEQDALPNINSIRGLD   78 (304)
T ss_dssp             CCBTTTTT--TTSTTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTTCSSSGGGCCCCSSCCCGGGSTTTTTTCCCHH
T ss_pred             CCCCcccc--ccCcCHHHHHHHHHHHHHHhCCchhHHHHHHHHHhhccCCCCeeEeecCCCCccccccCCcccccchhHH
Confidence            79999999  999999999999999999999999999999999999999999999999865   7999999985 68999


Q ss_pred             HHHHHHHHHHhhCCCCCchhhHHhhhchhhhhcCCCCcccccCCCCCCCCCCCCCC--CCCCCCCCHHHHHHHHHHCCCC
Q 045265          112 LIDKIKVVLEQRCPGAVSCSDILNLATRDAVHMAGAPSYPVFTGRRDGMTSTKESV--DLPSPSISWKESLACFQSKGLD  189 (345)
Q Consensus       112 ~I~~iK~~le~~cp~~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~--~lP~p~~~~~~l~~~F~~~Glt  189 (345)
                      +||.||++||+.||++||||||||||||+||+++|||.|+|++||+|+++|+..++  +||.|+.++++|++.|++||||
T Consensus        79 ~id~iK~~le~~cp~~VScADIlalAardAv~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~  158 (304)
T d1fhfa_          79 VVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLN  158 (304)
T ss_dssp             HHHHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHhhCCCccCHHHHHHHHHhhhhhhcCCCcccccCCCcCcCccccccccccCCCCCCCHHHHHHHHHHcCCC
Confidence            99999999999999999999999999999999999999999999999999987665  7999999999999999999999


Q ss_pred             ccchhhhcccccccccccccccccccccCCCCCCCCCCCHHHHHHHhccCCCCCCCCCCCCcccCCCCCCCCcccchHHH
Q 045265          190 VQDMVTLLGAHTMGQTRCRYIVDRLYNYKNTGKPDPSMNTTLLNRLRKECPPRTRKGQSDPLVYLNPETGSSYRFSESYY  269 (345)
Q Consensus       190 ~~elVaLsGaHTiG~ahc~~f~~Rl~~f~g~~~~dp~~d~~y~~~L~~~Cp~~~~~~~~~~~~~~~lD~~tp~~FDn~Yy  269 (345)
                      .+|||||+||||||++||.+|..|+|+|++++.+||++++.|+..|++.||..+  ...   .++.+|+.||.+|||+||
T Consensus       159 ~~d~VaLsGaHTiG~ahc~~~~~rl~~~~~~~~~d~~~~~~~~~~L~~~c~~~~--~~~---~~~~~d~~tp~~fDn~Yy  233 (304)
T d1fhfa_         159 TLDLVTLSGGHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARCPQNA--TGD---NLTNLDLSTPDQFDNRYY  233 (304)
T ss_dssp             HHHHHHHGGGGGSCEEEGGGTGGGTSCGGGSSSCCTTSCHHHHHHHHHHSCSSC--SSC---CEEESCSSSTTSCSTHHH
T ss_pred             HHHHHHHhhhhhhcccccccccccccCCCCCCCCCcccCHHHHHHHHHhcCCCC--CCC---cccccCCCCCCccccHHH
Confidence            999999999999999999999999999999989999999999999999999765  333   578899999999999999


Q ss_pred             HHhhccccccchhhhhccCCc--chHHHHHHHhhCHHHHHHHHHHHHHHhhcCCCCCCCCCcccccccccCC
Q 045265          270 SRVKTHEAVLGVDQQLSNGDN--NTLQIVDEFAAGFEDFRKALALSMSRMGSINVLTGKQGEIRRNCRCTNA  339 (345)
Q Consensus       270 ~~l~~~~glL~SD~~L~~~d~--~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tG~~GeIR~~C~~~n~  339 (345)
                      ++++.++|+|+|||+|+ .||  +|+++|++||.|+++|+++|++||+||++||||||.+||||++|+++|.
T Consensus       234 ~~l~~~~glL~SD~~L~-~dp~~~t~~~V~~yA~d~~~F~~~F~~Am~Km~~lgv~tg~~GeiR~~C~~~N~  304 (304)
T d1fhfa_         234 SNLLQLNGLLQSDQELF-STPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQCNFVNG  304 (304)
T ss_dssp             HHHHTTCCSSHHHHTTT-SSTTCSSHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCCC
T ss_pred             HHHhhcCcccHhhHHHH-hCCCchHHHHHHHHhhCHHHHHHHHHHHHHHHhcCCCCCCCCCcccCcccCcCC
Confidence            99999999999999999 886  7999999999999999999999999999999999999999999999984
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure