Citrus Sinensis ID: 045317

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460
MSTGLIDNGSNKIYDETEIAQNFKEGEAIEKEENHRVHKTFTSQENPEHVQEDGNREAAAIIDMKFKKKKALLEFRCMVEDAVLGNYLLGKPPRSHSPKEAALARSQLKKITLWGVPLLPSKAHEGTDIVLLKFLKAKDYKVHDAFEMLRKTLKWRRDYLADLIQEDGLDPDVGKLVYSNCKDREGRPLYYNVCGAFKNRELPKKLVDLEDLCDQFIRLEVKFMEKGIKELNFKPGGANSIVQIIDLKNSKPPDIKKFRVVSKKTVMMLQDNYPELMHRNIIINVPFWYYAFHTVASKFLSPRCKRKFVFARPAKVTKTLLKFISPENLPVEYGGLYRENDDFFPEDRTSELIVRKNTAGSVRIPVAETGVTMMWDLTVLGWDVSYKEEFIPDDEGSYRVLLQSEKEKKGGEGESMRNSFYISEPGKIVITIDNVTLKNKRVYYRFKTKPAVPMYIVSKE
cccccccccccccccccHHccccccccccccccccccccccccccccccccccccccHHHHccccHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccccccccccccccEEccccccccccEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEcccccccccHHHHHHHHHHHHHHHHccccccccEEEEEccHHHHHHHHHHHcccccccccEEEEEcccccHHHHHccccccccccccccccccccccccccccEEEEEEccccEEEEEEEcccccEEEEEEEEEcccEEEEEEEEEcccccEEEEEEcccccccccccccccEEEcccccEEEEEEEccccccEEEEEEEEEcccccccccccc
cccccEEcccccccccccHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccHHHHHcccHHHHHHHHccccccccccEEEEEccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEccccccccccHHHHHHHHHHHHHHHHccHHHHHHEEEEEccHHHHHHHHHHcHcccHccccEEEEEccccHHHHHHHHccHHHcccEccccccccccccccccEEEEEEEccccEEEEEEEEccccEEEEEEEEcccEEccccEEcccccccEEEEEEccccccccccccccccEEcccccEEEEEEEcccccccEEEEEEEEcccccEEEEEcc
mstglidngsnkiydETEIAQNfkegeaiekeenhrvhktftsqenpehvqedGNREAAAIIDMKFKKKKALLEFRCMVEDAVLgnyllgkpprshspkEAALARSQLKKItlwgvpllpskahegtDIVLLKFlkakdykvHDAFEMLRKTLKWRRDYLADLIqedgldpdvgklvysnckdregrplyynvcgafknrelpkkLVDLEDLCDQFIRLEVKFMEKGIKelnfkpgganSIVQIIDlknskppdikkfRVVSKKTVMMLQdnypelmhrniiinVPFWYYAFHTVaskflsprckrkfvfarpaKVTKTLLKfispenlpveygglyrenddffpedrtsELIVRkntagsvripvaeTGVTMMWDLTVlgwdvsykeefipddegSYRVLLQSekekkggegesmrnsfyisepgkivITIDNVTLKNKRVYYrfktkpavpmyivske
mstglidngsnkiydetEIAQNFKEGEAIEKEENHRVHKtftsqenpehvqedGNREAAAIIDMKFKKKKALLEFRCMVEDAVLGNYLLGKPPRSHSPKEAALARSQLKKITLWGVPLLPSKAHEGTDIVLLKflkakdykvHDAFEMLRKTLKWRRDYLADLiqedgldpdvGKLVysnckdregrplYYNVCGAFKNRELPKKLVDLEDLCDQFIRLEVKFMEKGIKelnfkpgganSIVQiidlknskppdikkfRVVSKKTVMMLQDNYPELMHRNIIINVPFWYYAFHTVASKFLSPRCKRKFVFarpakvtktllkfispenlpvEYGGLYRENDDFFPEDRTSelivrkntagsvripvaetgvtMMWDLTVLGWDVSYKEefipddegsyRVLLQsekekkggegesmrnsfyisepgkivitidnvtlknkrvyyrfktkpavpmyivske
MSTGLIDNGSNKIYDETEIAQNFKEGEAIEKEENHRVHKTFTSQENPEHVQEDGNREAAAIIDMKFKKKKALLEFRCMVEDAVLGNYLLGKPPRSHSPKEAALARSQLKKITLWGVPLLPSKAHEGTDIVLLKFLKAKDYKVHDAFEMLRKTLKWRRDYLADLIQEDGLDPDVGKLVYSNCKDREGRPLYYNVCGAFKNRELPKKLVDLEDLCDQFIRLEVKFMEKGIKELNFKPGGANSIVQIIDLKNSKPPDIKKFRVVSKKTVMMLQDNYPELMHRNIIINVPFWYYAFHTVASKFLSPRCKRKFVFARPAKVTKTLLKFISPENLPVEYGGLYRENDDFFPEDRTSELIVRKNTAGSVRIPVAETGVTMMWDLTVLGWDVSYKEEFIPDDEGSYRVLLQSekekkggegeSMRNSFYISEPGKIVITIDNVTLKNKRVYYRFKTKPAVPMYIVSKE
**********************************************************AAIIDMKFKKKKALLEFRCMVEDAVLGNYLLG****************QLKKITLWGVPLLPSKAHEGTDIVLLKFLKAKDYKVHDAFEMLRKTLKWRRDYLADLIQEDGLDPDVGKLVYSNCKDREGRPLYYNVCGAFKNRELPKKLVDLEDLCDQFIRLEVKFMEKGIKELNFKPGGANSIVQIIDLKNSKPPDIKKFRVVSKKTVMMLQDNYPELMHRNIIINVPFWYYAFHTVASKFLSPRCKRKFVFARPAKVTKTLLKFISPENLPVEYGGLYRENDDFFPEDRTSELIVRKNTAGSVRIPVAETGVTMMWDLTVLGWDVSYKEEFIPDDEGSYRVL******************FYISEPGKIVITIDNVTLKNKRVYYRFKTKPAVPMYIV***
*************************************************************************************************************KITLWGVPLLPSKAHEGTDIVLLKFLKAKDYKVHDAFEMLRKTLKWRRDYLADLIQEDGLDPDVGKLVYSNCKDREGRPLYYNVCGAFKNRELPKKLVDLEDLCDQFIRLEVKFMEKGIKEL***PGGANSIVQIIDLKNSKPPDIKKFRVVSKKTVMMLQDNYPELMHRNIIINVPFWYYAFHTVASKFLSPRCKRKFVFARPAKVTKTLLKFISPENLPVEYGGLYRENDDFFPEDRTSELIVRKNTAGSVRIPVAETGVTMMWDLTVLGWDVSYKEEFIP*************************NSFYISEPGKIVITIDNVTLKNKRVYYRFKTKPAVPMYIVSK*
MSTGLIDNGSNKIYDETEIAQNFKEGEAIEKEENHRVH***************GNREAAAIIDMKFKKKKALLEFRCMVEDAVLGNYLLGKP************RSQLKKITLWGVPLLPSKAHEGTDIVLLKFLKAKDYKVHDAFEMLRKTLKWRRDYLADLIQEDGLDPDVGKLVYSNCKDREGRPLYYNVCGAFKNRELPKKLVDLEDLCDQFIRLEVKFMEKGIKELNFKPGGANSIVQIIDLKNSKPPDIKKFRVVSKKTVMMLQDNYPELMHRNIIINVPFWYYAFHTVASKFLSPRCKRKFVFARPAKVTKTLLKFISPENLPVEYGGLYRENDDFFPEDRTSELIVRKNTAGSVRIPVAETGVTMMWDLTVLGWDVSYKEEFIPDDEGSYRVLLQSEK********SMRNSFYISEPGKIVITIDNVTLKNKRVYYRFKTKPAVPMYIVSKE
**************************************************************DMKFKKKKALLEFRCMVEDAVLGNYLLGKPPRSHSPKEAALARSQLKKITLWGVPLLPSKAHEGTDIVLLKFLKAKDYKVHDAFEMLRKTLKWRRDYLADLIQEDGLDPDVGKLVYSNCKDREGRPLYYNVCGAFKNRELPKKLVDLEDLCDQFIRLEVKFMEKGIKELNFKPGGANSIVQIIDLKNSKPPDIKKFRVVSKKTVMMLQDNYPELMHRNIIINVPFWYYAFHTVASKFLSPRCKRKFVFARPAKVTKTLLKFISPENLPVEYGGLYRENDDFFPEDRTSELIVRKNTAGSVRIPVAETGVTMMWDLTVLGWDVSYKEEFIPDDEGSYRVLLQSEK*****EGESMRNSFYISEPGKIVITIDNVTLKNKRVYYRFKTKPAVPMYIVSKE
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSTGLIDNGSNKIYDETEIAQNFKEGEAIEKEENHRVHKTFTSQENPEHVQEDGNREAAAIIDMKFKKKKALLEFRCMVEDAVLGNYLLGKPPRSHSPKEAALARSQLKKITLWGVPLLPSKAHEGTDIVLLKFLKAKDYKVHDAFEMLRKTLKWRRDYLADLIQEDGLDPDVGKLVYSNCKDREGRPLYYNVCGAFKNRELPKKLVDLEDLCDQFIRLEVKFMEKGIKELNFKPGGANSIVQIIDLKNSKPPDIKKFRVVSKKTVMMLQDNYPELMHRNIIINVPFWYYAFHTVASKFLSPRCKRKFVFARPAKVTKTLLKFISPENLPVEYGGLYRENDDFFPEDRTSELIVRKNTAGSVRIPVAETGVTMMWDLTVLGWDVSYKEEFIPDDEGSYRVLLQSEKEKKGGEGESMRNSFYISEPGKIVITIDNVTLKNKRVYYRFKTKPAVPMYIVSKE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query460 2.2.26 [Sep-21-2011]
Q94C59540 Patellin-4 OS=Arabidopsis yes no 0.710 0.605 0.487 3e-91
Q56Z59490 Patellin-3 OS=Arabidopsis no no 0.813 0.763 0.386 7e-82
Q9M0R2668 Patellin-5 OS=Arabidopsis no no 0.732 0.504 0.417 2e-79
Q9SCU1409 Patellin-6 OS=Arabidopsis no no 0.726 0.816 0.386 2e-67
Q56ZI2683 Patellin-2 OS=Arabidopsis no no 0.721 0.486 0.370 3e-64
Q56WK6573 Patellin-1 OS=Arabidopsis no no 0.713 0.572 0.372 2e-60
Q6C9R9362 Phosphatidylinositol tran yes no 0.445 0.566 0.327 8e-18
Q6CXS7297 Phosphatidylinositol tran yes no 0.419 0.649 0.294 2e-15
P24280304 SEC14 cytosolic factor OS yes no 0.447 0.677 0.294 2e-14
P33324310 CRAL-TRIO domain-containi no no 0.473 0.703 0.289 4e-14
>sp|Q94C59|PATL4_ARATH Patellin-4 OS=Arabidopsis thaliana GN=PATL4 PE=1 SV=2 Back     alignment and function desciption
 Score =  335 bits (860), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 170/349 (48%), Positives = 228/349 (65%), Gaps = 22/349 (6%)

Query: 109 KKITLWGVPLLPSKAHEGTDIVLLKFLKAKDYKVHDAFEMLRKTLKWRRDYLADLIQEDG 168
           K I LWGVPLLPSK  E TD++LLKFL+A+D+KV++AFEML+KTLKWR+    D I  + 
Sbjct: 201 KDIELWGVPLLPSKGAESTDVILLKFLRARDFKVNEAFEMLKKTLKWRKQNKIDSILGEE 260

Query: 169 LDPDVGKLVYSNCKDREGRPLYYNV--------CGAFKNRELPKKLVDLEDLCDQFIRLE 220
              D+    Y N  DRE  P+ YNV         G+ KNRE             +F+R  
Sbjct: 261 FGEDLATAAYMNGVDRESHPVCYNVHSEELYQTIGSEKNRE-------------KFLRWR 307

Query: 221 VKFMEKGIKELNFKPGGANSIVQIIDLKNSKPPDIKKFRVVSKKTVMMLQDNYPELMHRN 280
            + MEKGI++LN KPGG  S++QI DLKN+      +  V  KK +  LQDNYPE + RN
Sbjct: 308 FQLMEKGIQKLNLKPGGVTSLLQIHDLKNAPGVSRTEIWVGIKKVIETLQDNYPEFVSRN 367

Query: 281 IIINVPFWYYAFHTVASKFLSPRCKRKFVFARPAKVTKTLLKFISPENLPVEYGGLYREN 340
           I INVPFW+YA   V S FL+ R K KFV ARPAKV +TLLK+I  + LPV+YGG    +
Sbjct: 368 IFINVPFWFYAMRAVLSPFLTQRTKSKFVVARPAKVRETLLKYIPADELPVQYGGFKTVD 427

Query: 341 DDFFPEDRTSELIVRKNTAGSVRIPVAETGVTMMWDLTVLGWDVSYKEEFIPDDEGSYRV 400
           D  F  +  SE++V+  ++ ++ IP  ET  T++WD+ VLGW+V+YKEEF+P +EG+Y V
Sbjct: 428 DTEFSNETVSEVVVKPGSSETIEIPAPETEGTLVWDIAVLGWEVNYKEEFVPTEEGAYTV 487

Query: 401 LLQSEKEKKGGEGESMRNSFYISEPGKIVITIDNVTLKNKRVYYRFKTK 449
           ++Q  K+    EG  +RNSF  S+ GKIV+T+DNV+ K K+V YR++TK
Sbjct: 488 IVQKVKKMGANEG-PIRNSFKNSQAGKIVLTVDNVSGKKKKVLYRYRTK 535
Carrier protein that may be involved in membrane-trafficking events associated with cell plate formation during cytokinesis. Binds to some hydrophobic molecules such as phosphoinositides and promotes their transfer between the different cellular sites.
Arabidopsis thaliana (taxid: 3702)
>sp|Q56Z59|PATL3_ARATH Patellin-3 OS=Arabidopsis thaliana GN=PATL3 PE=1 SV=2 Back     alignment and function description
>sp|Q9M0R2|PATL5_ARATH Patellin-5 OS=Arabidopsis thaliana GN=PATL5 PE=1 SV=2 Back     alignment and function description
>sp|Q9SCU1|PATL6_ARATH Patellin-6 OS=Arabidopsis thaliana GN=PATL6 PE=2 SV=1 Back     alignment and function description
>sp|Q56ZI2|PATL2_ARATH Patellin-2 OS=Arabidopsis thaliana GN=PATL2 PE=1 SV=2 Back     alignment and function description
>sp|Q56WK6|PATL1_ARATH Patellin-1 OS=Arabidopsis thaliana GN=PATL1 PE=1 SV=2 Back     alignment and function description
>sp|Q6C9R9|SFH5_YARLI Phosphatidylinositol transfer protein SFH5 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SFH5 PE=3 SV=1 Back     alignment and function description
>sp|Q6CXS7|SFH5_KLULA Phosphatidylinositol transfer protein SFH5 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SFH5 PE=3 SV=1 Back     alignment and function description
>sp|P24280|SEC14_YEAST SEC14 cytosolic factor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC14 PE=1 SV=3 Back     alignment and function description
>sp|P33324|YKJ1_YEAST CRAL-TRIO domain-containing protein YKL091C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKL091C PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query460
225438121449 PREDICTED: patellin-4 [Vitis vinifera] g 0.947 0.971 0.548 1e-138
449468684450 PREDICTED: patellin-4-like [Cucumis sati 0.813 0.831 0.582 1e-128
224085639384 predicted protein [Populus trichocarpa] 0.828 0.992 0.565 1e-122
356545867470 PREDICTED: patellin-4-like [Glycine max] 0.869 0.851 0.525 1e-121
356536840457 PREDICTED: patellin-4-like [Glycine max] 0.830 0.835 0.491 1e-112
297740886452 unnamed protein product [Vitis vinifera] 0.902 0.918 0.476 1e-110
255582487409 Patellin-4, putative [Ricinus communis] 0.704 0.792 0.593 1e-109
225444143493 PREDICTED: patellin-4 isoform 1 [Vitis v 0.902 0.841 0.451 1e-108
147864826493 hypothetical protein VITISV_004911 [Viti 0.902 0.841 0.449 1e-108
359483972501 PREDICTED: patellin-4 isoform 2 [Vitis v 0.902 0.828 0.443 1e-106
>gi|225438121|ref|XP_002273072.1| PREDICTED: patellin-4 [Vitis vinifera] gi|297744152|emb|CBI37122.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 251/458 (54%), Positives = 326/458 (71%), Gaps = 22/458 (4%)

Query: 11  NKIYDETEIAQN--------FKEGEAIEKEENHRVHKTFTSQENPEHVQEDGNREAAAII 62
           ++I DET   +N         ++ E++  ++    H       +PE       +E  A I
Sbjct: 5   SQISDETNENENTHKHQEIHLEDAESMNPDDESNSHTEMKKPMSPE-------QEYKASI 57

Query: 63  DMKFKKKKALLEFRCMVEDAVLGNYLLGKPPRSHSPKEAALARSQLKKITLWGVPLLPSK 122
            MK  KKKALLE RC VEDA++GNY+LGKP R   P E+   +  L  I+LWGVPLLPSK
Sbjct: 58  QMKKSKKKALLELRCRVEDAIIGNYMLGKP-RGKVP-ESKKTQENLHDISLWGVPLLPSK 115

Query: 123 AHEGTDIVLLKFLKAKDYKVHDAFEMLRKTLKWRRDYLADLIQEDGLDPDVGKLVYSNCK 182
            HEGTDI+LLKFLKA+D+KV +AF MLR+TL WRR++  + I E+   P++  +VY N  
Sbjct: 116 GHEGTDIILLKFLKARDFKVSEAFNMLRRTLIWRREFKTEGILEENFGPELENVVYINST 175

Query: 183 DREGRPLYYNVCGAFKNRELPKKLVDLEDLCDQFIRLEVKFMEKGIKELNFKPGGANSIV 242
           D+EG PL YNVCGAFK+R+  KK    E  C++F+R  V+ MEK I+ LNF  GG +S+V
Sbjct: 176 DKEGHPLCYNVCGAFKDRDFYKKTFGSEAKCEEFLRWRVQSMEKVIQNLNFTAGGVDSMV 235

Query: 243 QIIDLKNSKPPDIKKFRVVSKKTVMMLQDNYPELMHRNIIINVPFWYYAFHTVASKFLSP 302
           QI+DLKNS  P  K+ R+V+KK + +LQDNYPEL+ R+I+INVPFWYYA HT+ SKF+S 
Sbjct: 236 QILDLKNSPRPSNKELRLVTKKAITLLQDNYPELIFRHIVINVPFWYYASHTLISKFISQ 295

Query: 303 RCKRKFVFARPAKVTKTLLKFISPENLPVEYGGLYREND-DFFPEDRTSELIVRKNTAGS 361
           R K KF+ ARP+ V  TLLKFI+PENLPV+YGGL REND +F P D+  ELIV+  T  S
Sbjct: 296 RTKSKFILARPSGVADTLLKFIAPENLPVQYGGLKRENDIEFSPADKALELIVKAGTIES 355

Query: 362 VRIPVAETGVTMMWDLTVLGWDVSYKEEFIPDDEGSYRVLLQSEKEKKGGEGESMRNSFY 421
           + IP  E GVT++WD+T++GWDV+YKEEFIP+DEGSY++LL+ +K+     G+SMRNSFY
Sbjct: 356 IEIPATEAGVTVVWDMTIVGWDVNYKEEFIPEDEGSYKILLEKDKKM----GQSMRNSFY 411

Query: 422 ISEPGKIVITIDNVTLKNKRVYYRFKTKPAVPMYIVSK 459
           ISEPGKIVITI+N T K KRV YRF++KP VPMY+  K
Sbjct: 412 ISEPGKIVITIENGTYKRKRVLYRFRSKPTVPMYVYFK 449

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449468684|ref|XP_004152051.1| PREDICTED: patellin-4-like [Cucumis sativus] gi|449525126|ref|XP_004169570.1| PREDICTED: patellin-4-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224085639|ref|XP_002307646.1| predicted protein [Populus trichocarpa] gi|222857095|gb|EEE94642.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356545867|ref|XP_003541355.1| PREDICTED: patellin-4-like [Glycine max] Back     alignment and taxonomy information
>gi|356536840|ref|XP_003536941.1| PREDICTED: patellin-4-like [Glycine max] Back     alignment and taxonomy information
>gi|297740886|emb|CBI31068.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255582487|ref|XP_002532029.1| Patellin-4, putative [Ricinus communis] gi|223528299|gb|EEF30345.1| Patellin-4, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225444143|ref|XP_002268764.1| PREDICTED: patellin-4 isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147864826|emb|CAN83643.1| hypothetical protein VITISV_004911 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359483972|ref|XP_003633046.1| PREDICTED: patellin-4 isoform 2 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query460
TAIR|locus:2204594540 AT1G30690 [Arabidopsis thalian 0.728 0.620 0.483 2.1e-88
TAIR|locus:2207016490 AT1G72160 "AT1G72160" [Arabido 0.732 0.687 0.417 3.2e-79
TAIR|locus:2141563668 AT4G09160 "AT4G09160" [Arabido 0.732 0.504 0.417 1.9e-74
TAIR|locus:2098282409 AT3G51670 "AT3G51670" [Arabido 0.767 0.863 0.375 1.1e-64
TAIR|locus:2009502683 PATL2 "PATELLIN 2" [Arabidopsi 0.741 0.499 0.367 1.3e-63
TAIR|locus:2207001573 PATL1 "AT1G72150" [Arabidopsis 0.921 0.739 0.326 1.2e-58
DICTYBASE|DDB_G0270022444 DDB_G0270022 "cellular retinal 0.569 0.590 0.267 5.9e-17
SGD|S000004684304 SEC14 "Phosphatidylinositol/ph 0.519 0.786 0.295 2.7e-15
SGD|S000001574310 YKL091C "Putative homolog of S 0.469 0.696 0.295 1.3e-14
ZFIN|ZDB-GENE-060526-180395 si:ch211-89f7.1 "si:ch211-89f7 0.530 0.617 0.279 1.8e-14
TAIR|locus:2204594 AT1G30690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 827 (296.2 bits), Expect = 2.1e-88, Sum P(2) = 2.1e-88
 Identities = 165/341 (48%), Positives = 225/341 (65%)

Query:   109 KKITLWGVPLLPSKAHEGTDIVLLKFLKAKDYKVHDAFEMLRKTLKWRRDYLADLIQEDG 168
             K I LWGVPLLPSK  E TD++LLKFL+A+D+KV++AFEML+KTLKWR+    D I  + 
Sbjct:   201 KDIELWGVPLLPSKGAESTDVILLKFLRARDFKVNEAFEMLKKTLKWRKQNKIDSILGEE 260

Query:   169 LDPDVGKLVYSNCKDREGRPLYYNVCGAFKNRELPKKLVDLEDLCDQFIRLEVKFMEKGI 228
                D+    Y N  DRE  P+ YNV     + EL  + +  E   ++F+R   + MEKGI
Sbjct:   261 FGEDLATAAYMNGVDRESHPVCYNV----HSEEL-YQTIGSEKNREKFLRWRFQLMEKGI 315

Query:   229 KELNFKPGGANSIVQIIDLKNSKPPDIKKFRVVSKKTVMMLQDNYPELMHRNIIINVPFW 288
             ++LN KPGG  S++QI DLKN+      +  V  KK +  LQDNYPE + RNI INVPFW
Sbjct:   316 QKLNLKPGGVTSLLQIHDLKNAPGVSRTEIWVGIKKVIETLQDNYPEFVSRNIFINVPFW 375

Query:   289 YYAFHTVASKFLSPRCKRKFVFARPAKVTKTLLKFISPENLPVEYGGLYRENDDFFPEDR 348
             +YA   V S FL+ R K KFV ARPAKV +TLLK+I  + LPV+YGG    +D  F  + 
Sbjct:   376 FYAMRAVLSPFLTQRTKSKFVVARPAKVRETLLKYIPADELPVQYGGFKTVDDTEFSNET 435

Query:   349 TSELIVRKNTAGSVRIPVAETGVTMMWDLTVLGWDVSYKEEFIPDDEGSYRVLLQSXXXX 408
              SE++V+  ++ ++ IP  ET  T++WD+ VLGW+V+YKEEF+P +EG+Y V++Q     
Sbjct:   436 VSEVVVKPGSSETIEIPAPETEGTLVWDIAVLGWEVNYKEEFVPTEEGAYTVIVQKVKKM 495

Query:   409 XXXXXXSMRNSFYISEPGKIVITIDNVTLKNKRVYYRFKTK 449
                    +RNSF  S+ GKIV+T+DNV+ K K+V YR++TK
Sbjct:   496 GANEG-PIRNSFKNSQAGKIVLTVDNVSGKKKKVLYRYRTK 535
GO:0005215 "transporter activity" evidence=IEA;ISS
GO:0005622 "intracellular" evidence=IEA
GO:0005634 "nucleus" evidence=ISM;IDA
GO:0006810 "transport" evidence=IEA;ISS
GO:0016021 "integral to membrane" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
GO:0016126 "sterol biosynthetic process" evidence=RCA
GO:0052541 "plant-type cell wall cellulose metabolic process" evidence=RCA
GO:0052546 "cell wall pectin metabolic process" evidence=RCA
TAIR|locus:2207016 AT1G72160 "AT1G72160" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2141563 AT4G09160 "AT4G09160" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2098282 AT3G51670 "AT3G51670" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009502 PATL2 "PATELLIN 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2207001 PATL1 "AT1G72150" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0270022 DDB_G0270022 "cellular retinaldehyde-binding/triple function domain-containing protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
SGD|S000004684 SEC14 "Phosphatidylinositol/phosphatidylcholine transfer protein" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
SGD|S000001574 YKL091C "Putative homolog of Sec14p" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060526-180 si:ch211-89f7.1 "si:ch211-89f7.1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00028584001
SubName- Full=Chromosome chr7 scaffold_44, whole genome shotgun sequence; (419 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query460
cd00170157 cd00170, SEC14, Sec14p-like lipid-binding domain 1e-29
smart00516158 smart00516, SEC14, Domain in homologues of a S 9e-29
pfam00650152 pfam00650, CRAL_TRIO, CRAL/TRIO domain 2e-25
pfam0376548 pfam03765, CRAL_TRIO_N, CRAL/TRIO, N-terminal doma 4e-05
smart0110048 smart01100, CRAL_TRIO_N, CRAL/TRIO, N-terminal dom 1e-04
pfam13716149 pfam13716, CRAL_TRIO_2, Divergent CRAL/TRIO domain 2e-04
>gnl|CDD|238099 cd00170, SEC14, Sec14p-like lipid-binding domain Back     alignment and domain information 
 Score =  112 bits (283), Expect = 1e-29
 Identities = 54/165 (32%), Positives = 82/165 (49%), Gaps = 13/165 (7%)

Query: 172 DVGKLVYSNCKDREGRPLYYNVCGAFKNRELPKKLVDLEDLCDQFIRLEVKFMEKGIKEL 231
           ++GK+ Y   +D+EGRP+     G     +   K +D E+     +R  V  +EK ++E 
Sbjct: 6   ELGKVGYLGGRDKEGRPVLIIRAG----NKDLSKSLDSEE----LLRYLVYTLEKLLQED 57

Query: 232 NFKPGGANSIVQIIDLKNSKPPDIKKFRVVSKKTVMMLQDNYPELMHRNIIINVPFWYYA 291
           +         V IIDLK      +     + KK + +LQDNYPE +    IIN P+++  
Sbjct: 58  DE---QVEGFVVIIDLKGLSLSHLLPDPSLLKKILKILQDNYPERLKAVYIINPPWFFKV 114

Query: 292 FHTVASKFLSPRCKRKFVFARPAKVTKTLLKFISPENLPVEYGGL 336
              +   FLS + ++K VF    K  + LLK+I  E LP EYGG 
Sbjct: 115 LWKIVKPFLSEKTRKKIVFLGSDK--EELLKYIDKEQLPEEYGGT 157

Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits. Length = 157
>gnl|CDD|214706 smart00516, SEC14, Domain in homologues of a S Back     alignment and domain information
>gnl|CDD|216042 pfam00650, CRAL_TRIO, CRAL/TRIO domain Back     alignment and domain information
>gnl|CDD|217718 pfam03765, CRAL_TRIO_N, CRAL/TRIO, N-terminal domain Back     alignment and domain information
>gnl|CDD|215024 smart01100, CRAL_TRIO_N, CRAL/TRIO, N-terminal domain Back     alignment and domain information
>gnl|CDD|222339 pfam13716, CRAL_TRIO_2, Divergent CRAL/TRIO domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 460
KOG1470324 consensus Phosphatidylinositol transfer protein PD 100.0
KOG1471317 consensus Phosphatidylinositol transfer protein SE 100.0
PF00650159 CRAL_TRIO: CRAL/TRIO domain; InterPro: IPR001251 T 99.96
smart00516158 SEC14 Domain in homologues of a S. cerevisiae phos 99.94
cd00170157 SEC14 Sec14p-like lipid-binding domain. Found in s 99.92
PF13897136 GOLD_2: Golgi-dynamics membrane-trafficking 99.87
KOG3878469 consensus Protein involved in maintenance of Golgi 99.48
PF13716149 CRAL_TRIO_2: Divergent CRAL/TRIO domain; PDB: 2D4Q 99.44
PF0376555 CRAL_TRIO_N: CRAL/TRIO, N-terminal domain; InterPr 98.8
KOG4406 467 consensus CDC42 Rho GTPase-activating protein [Sig 97.91
KOG3287236 consensus Membrane trafficking protein, emp24/gp25 96.96
KOG1692201 consensus Putative cargo transport protein EMP24 ( 92.53
KOG1693209 consensus emp24/gp25L/p24 family of membrane traff 91.46
PF01105183 EMP24_GP25L: emp24/gp25L/p24 family/GOLD; InterPro 83.88
>KOG1470 consensus Phosphatidylinositol transfer protein PDR16 and related proteins [Lipid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=4.9e-39  Score=310.23  Aligned_cols=198  Identities=28%  Similarity=0.505  Sum_probs=172.4

Q ss_pred             CCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCCCc-cccCCCcccc-ccceeeeccCCCCCeEEEEecCCCCCCCC
Q 045317          125 EGTDIVLLKFLKAKDYKVHDAFEMLRKTLKWRRDYLADL-IQEDGLDPDV-GKLVYSNCKDREGRPLYYNVCGAFKNREL  202 (460)
Q Consensus       125 ~~~D~~LLRFLrarkfdv~kA~~~l~~~l~wR~~~~~d~-i~~~~~~~el-~~~~~~~G~Dk~GrpV~i~~~g~~d~~~l  202 (460)
                      +++|.+++||||||+||+++|.+||.++|.||+.+++.. +..+.+..++ .+++|+.|+|++||||+|+++......  
T Consensus        46 ~~~d~cllRfLrAr~wnv~kA~kml~~tL~WR~~~~~~~~~~~~Ev~~e~~tGK~yi~G~D~~gRPVl~~~~~~~~qn--  123 (324)
T KOG1470|consen   46 WCSDACLLRFLRARKWNVKKASKMLSNTLKWRRSFGPEEVIEADEVAAELETGKAYILGHDKDGRPVLYLRPRPHRQN--  123 (324)
T ss_pred             cCcHHHHHHHHHHcCCcHHHHHHHHHHHhHHHHhcCCccccCHHHHHHHhhcCcEEEecccCCCCeEEEEecCCCCCC--
Confidence            679999999999999999999999999999999999887 4444455555 689999999999999999965532221  


Q ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHhccCCCCcceeEEEEeCCCCCCCCchhHHHHHHHHHHHHhhhcccccceEEE
Q 045317          203 PKKLVDLEDLCDQFIRLEVKFMEKGIKELNFKPGGANSIVQIIDLKNSKPPDIKKFRVVSKKTVMMLQDNYPELMHRNII  282 (460)
Q Consensus       203 ~~~~~~~~~~~~~~~r~~~~~~E~~~~~~~~~~~~v~~~v~I~Dl~g~s~~~~~~~~~~~k~~~~~lq~~YPerL~~i~I  282 (460)
                             ..+..++.|+++|+||.++..+   +.+++++++++|++|+|+. +.++ ...+.++.++|+||||||++++|
T Consensus       124 -------~~t~~~~~r~~Vy~mE~Ai~~l---p~~qe~~~~L~D~~~fs~s-N~d~-~~~k~~~~~lq~hYPErLg~a~l  191 (324)
T KOG1470|consen  124 -------TKTQKELERLLVYTLENAILFL---PPGQEQFVWLFDLTGFSMS-NPDI-KFLKELLHILQDHYPERLGKALL  191 (324)
T ss_pred             -------CCCHHHHHHHHHHHHHHHHHhC---CCCcceEEEEEecccCccc-CCCc-HHHHHHHHHHHHhChHHhhhhhh
Confidence                   1356899999999999998765   5678999999999999876 3444 58899999999999999999999


Q ss_pred             EeCChhHHHHHHHHhhcCChhhcccEEEeCCccchHhHhccCCCCCCcccCCCccCC
Q 045317          283 INVPFWYYAFHTVASKFLSPRCKRKFVFARPAKVTKTLLKFISPENLPVEYGGLYRE  339 (460)
Q Consensus       283 IN~P~~f~~~w~lvkpfL~~~t~~KI~~~~~~~~~~~L~e~Id~d~LP~~yGG~~~~  339 (460)
                      +|+||+|..+|+++||||+++|++||.|+.+   ...|.+|||+++||..+||+...
T Consensus       192 ~~~P~iF~~~wkiikpflDp~t~~Kv~F~~~---~~~l~~~~d~~~l~s~~GG~~~~  245 (324)
T KOG1470|consen  192 VNAPWIFQPFWKIIKPFLDPKTASKVKFVEP---KDDLSEYFDESQLPSLFGGKLLF  245 (324)
T ss_pred             cCChHHHHHHHHHhhhccChhhhceeEEecC---hhHHHhhCCccccchhhCCCccc
Confidence            9999999999999999999999999999986   45599999999999999995543

>KOG1471 consensus Phosphatidylinositol transfer protein SEC14 and related proteins [Lipid transport and metabolism] Back     alignment and domain information
>PF00650 CRAL_TRIO: CRAL/TRIO domain; InterPro: IPR001251 This entry defines the C-terminal of various retinaldehyde/retinal-binding proteins that may be functional components of the visual cycle Back     alignment and domain information
>smart00516 SEC14 Domain in homologues of a S Back     alignment and domain information
>cd00170 SEC14 Sec14p-like lipid-binding domain Back     alignment and domain information
>PF13897 GOLD_2: Golgi-dynamics membrane-trafficking Back     alignment and domain information
>KOG3878 consensus Protein involved in maintenance of Golgi structure and ER-Golgi transport [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF13716 CRAL_TRIO_2: Divergent CRAL/TRIO domain; PDB: 2D4Q_B 3PG7_B 2E2X_B 3P7Z_B 3PEG_A Back     alignment and domain information
>PF03765 CRAL_TRIO_N: CRAL/TRIO, N-terminal domain; InterPro: IPR008273 This entry defines the N-terminal of various retinaldehyde/retinal-binding proteins that may be functional components of the visual cycle Back     alignment and domain information
>KOG4406 consensus CDC42 Rho GTPase-activating protein [Signal transduction mechanisms; Cytoskeleton] Back     alignment and domain information
>KOG3287 consensus Membrane trafficking protein, emp24/gp25L/p24 family [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1692 consensus Putative cargo transport protein EMP24 (p24 protein family) [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1693 consensus emp24/gp25L/p24 family of membrane trafficking proteins [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF01105 EMP24_GP25L: emp24/gp25L/p24 family/GOLD; InterPro: IPR009038 The GOLD (for Golgi dynamics) domain is a protein module found in several eukaryotic Golgi and lipid-traffic proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query460
1aua_A296 Phosphatidylinositol Transfer Protein Sec14p From S 2e-15
3b74_A320 Crystal Structure Of Yeast Sec14 Homolog Sfh1 In Co 3e-15
3q8g_A320 Resurrection Of A Functional Phosphatidylinositol T 3e-15
4fmm_A360 Dimeric Sec14 Family Homolog 3 From Saccharomyces C 1e-10
1olm_A403 Supernatant Protein Factor In Complex With Rrr-Alph 1e-09
1olm_E403 Supernatant Protein Factor In Complex With Rrr-Alph 2e-09
1o6u_A403 The Crystal Structure Of Human Supernatant Protein 2e-07
1oip_A278 The Molecular Basis Of Vitamin E Retention: Structu 3e-05
1r5l_A262 Crystal Structure Of Human Alpha-tocopherol Transfe 4e-05
>pdb|1AUA|A Chain A, Phosphatidylinositol Transfer Protein Sec14p From Saccharomyces Cerevisiae Length = 296 Back     alignment and structure 
Iteration: 1

 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 96/214 (44%), Gaps = 8/214 (3%)
Query: 128 DIVLLKFLKAKDYKVHDAFEMLRKTLKWRRDYLADLIQED---GLDPDVGKLV--YSNCK 182
           D  LL+FL+A+ + V  A EM     KWR+DY  D I +D      P + K    Y +  
Sbjct: 52  DSTLLRFLRARKFDVQLAKEMFENCEKWRKDYGTDTILQDFHYDEKPLIAKFYPQYYHKT 111
Query: 183 DREGRPLYYNVCGAFKNRELPKKLVDLEDLCDQFIRLEVKFMEKGIKELNFKPGG-ANSI 241
           D++GRP+Y+   GA    E+  K+   E +    +      ++  +   +   G    + 
Sbjct: 112 DKDGRPVYFEELGAVNLHEM-NKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLVETS 170
Query: 242 VQIIDLKNSKPPDIKKFRVVSKKTVMMLQDNYPELMHRNIIINVPFWYYAFHTVASKFLS 301
             I+DLK              ++   + Q+ YPE M +  IIN PF +     +   FL 
Sbjct: 171 CTIMDLKGISISSAYSVMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLD 230
Query: 302 PRCKRKFVFARPAKVTKTLLKFISPENLPVEYGG 335
           P    K +F   +   K LLK I  ENLPV++GG
Sbjct: 231 PVTVSK-IFILGSSYQKELLKQIPAENLPVKFGG 263
>pdb|3B74|A Chain A, Crystal Structure Of Yeast Sec14 Homolog Sfh1 In Complex With Phosphatidylethanolamine Length = 320 Back     alignment and structure
>pdb|3Q8G|A Chain A, Resurrection Of A Functional Phosphatidylinositol Transfer Protein From A Pseudo-Sec14 Scaffold By Directed Evolution Length = 320 Back     alignment and structure
>pdb|4FMM|A Chain A, Dimeric Sec14 Family Homolog 3 From Saccharomyces Cerevisiae Presents Some Novel Features Of Structure That Lead To A Surprising "dimer- Monomer" State Change Induced By Substrate Binding Length = 360 Back     alignment and structure
>pdb|1OLM|A Chain A, Supernatant Protein Factor In Complex With Rrr-Alpha-Tocopherylquinone: A Link Between Oxidized Vitamin E And Cholesterol Biosynthesis Length = 403 Back     alignment and structure
>pdb|1OLM|E Chain E, Supernatant Protein Factor In Complex With Rrr-Alpha-Tocopherylquinone: A Link Between Oxidized Vitamin E And Cholesterol Biosynthesis Length = 403 Back     alignment and structure
>pdb|1O6U|A Chain A, The Crystal Structure Of Human Supernatant Protein Factor Length = 403 Back     alignment and structure
>pdb|1OIP|A Chain A, The Molecular Basis Of Vitamin E Retention: Structure Of Human Alpha-tocopherol Transfer Protein Length = 278 Back     alignment and structure
>pdb|1R5L|A Chain A, Crystal Structure Of Human Alpha-tocopherol Transfer Protein Bound To Its Ligand Length = 262 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query460
1olm_A403 SEC14-like protein 2; lipid-binding protein, chole 1e-61
3q8g_A320 CRAL-TRIO domain-containing protein YKL091C; strin 6e-50
1aua_A296 Phosphatidylinositol transfer protein SEC14P; phos 3e-49
1r5l_A262 Alpha-TTP, protein (alpha-tocopherol transfer prot 8e-32
3hx3_A316 Retinaldehyde-binding protein 1; lipid transfer pr 1e-29
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-08
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E* Length = 403 Back     alignment and structure
 Score =  205 bits (522), Expect = 1e-61
 Identities = 70/360 (19%), Positives = 135/360 (37%), Gaps = 44/360 (12%)

Query: 127 TDIVLLKFLKAKDYKVHDAFEMLRKTLKWRRDYLADLIQEDGLDPDVGKLVYSNC---KD 183
            D  LL++L+A+ + +  +  MLRK +++R+    D I      P+V +   S      D
Sbjct: 34  DDYFLLRWLRARSFDLQKSEAMLRKHVEFRKQKDIDNIISWQP-PEVIQQYLSGGMCGYD 92

Query: 184 REGRPLYYNVCGAFKNRELPKKLVDLEDLCDQFIRLEVKFMEKGIKELNFK----PGGAN 239
            +G P++Y++ G    + L              +R +++  E  ++E   +         
Sbjct: 93  LDGCPVWYDIIGPLDAKGLLFSASK-----QDLLRTKMRECELLLQECAHQTTKLGRKVE 147

Query: 240 SIVQIIDLKNSKPPDIKKFRV-VSKKTVMMLQDNYPELMHRNIIINVPFWYYAFHTVASK 298
           +I  I D +      + K  V    + + M ++NYPE + R  ++  P  +   + +   
Sbjct: 148 TITIIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKP 207

Query: 299 FLSPRCKRKFVFARPAKVTKTLLKFISPENLPVEYGGLYREND------------DFFPE 346
           FLS   ++K +    A   + LLK ISP+ +PVEYGG   + D               P 
Sbjct: 208 FLSEDTRKKIMVL-GANWKEVLLKHISPDQVPVEYGGTMTDPDGNPKCKSKINYGGDIPR 266

Query: 347 D----------RTSELIVRKNTAGSVRIPVAETGVTMMWDLTVLGWDVSY----KEEFIP 392
                          + + + ++  V   +   G  + W     G DV +    K +   
Sbjct: 267 KYYVRDQVKQQYEHSVQISRGSSHQVEYEILFPGCVLRWQFMSDGADVGFGIFLKTKMGE 326

Query: 393 DDEGSYRVLLQSEKEKKGGEGESMRNSFYISEPGKIVITIDNV--TLKNKRVYYRFKTKP 450
                    +    ++          +   S+PG  V+  DN    +  K+V +  +   
Sbjct: 327 RQRAGEMTEVL-PNQRYNSHLVPEDGTLTCSDPGIYVLRFDNTYSFIHAKKVNFTVEVLL 385
>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A* Length = 320 Back     alignment and structure
>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1 Length = 296 Back     alignment and structure
>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A* Length = 262 Back     alignment and structure
>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A* Length = 316 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query460
1olm_A403 SEC14-like protein 2; lipid-binding protein, chole 100.0
3q8g_A320 CRAL-TRIO domain-containing protein YKL091C; strin 100.0
1aua_A296 Phosphatidylinositol transfer protein SEC14P; phos 100.0
1r5l_A262 Alpha-TTP, protein (alpha-tocopherol transfer prot 100.0
3hx3_A316 Retinaldehyde-binding protein 1; lipid transfer pr 100.0
3pg7_A256 Neurofibromin; SEC lipid binding domain, PH domain 99.06
3peg_A290 Neurofibromin; SEC14 domain, pleckstrin homology d 98.81
2dam_A67 ETEA protein; KIAA0887, UBA-like domain, structura 81.04
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E* Back     alignment and structure
Probab=100.00  E-value=1.1e-70  Score=565.58  Aligned_cols=350  Identities=22%  Similarity=0.361  Sum_probs=298.4

Q ss_pred             cccCCCCCHHHHHHHHHHHHHHHHHHhccccCCCCCCCCChhHHHHHhhhhhhhhhccCCCCCCCCCCCCHHHHHHHHHh
Q 045317           58 AAAIIDMKFKKKKALLEFRCMVEDAVLGNYLLGKPPRSHSPKEAALARSQLKKITLWGVPLLPSKAHEGTDIVLLKFLKA  137 (460)
Q Consensus        58 ~~~~~~ls~~q~~aL~elr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~lp~~~~~~~D~~LLRFLra  137 (460)
                      +|++++|++.|+++|++||+++.+..                                 +++|    ..+|.+|||||||
T Consensus         2 ~g~~~~l~~~q~~~l~~lr~~l~~~~---------------------------------~~l~----~~dD~~LlRFLra   44 (403)
T 1olm_A            2 SGRVGDLSPRQKEALAKFRENVQDVL---------------------------------PALP----NPDDYFLLRWLRA   44 (403)
T ss_dssp             CSBTTBCCHHHHHHHHHHHHHHGGGG---------------------------------GGSS----CCCHHHHHHHHHH
T ss_pred             CCCccCCCHHHHHHHHHHHHHHHhhc---------------------------------cCCC----CCChhHHHHHHHh
Confidence            69999999999999999999998741                                 2244    5799999999999


Q ss_pred             cCCCHHHHHHHHHHHHHHHHHcCCCccccCCCccc-ccc--ceeeeccCCCCCeEEEEecCCCCCCCCccccccchhhHH
Q 045317          138 KDYKVHDAFEMLRKTLKWRRDYLADLIQEDGLDPD-VGK--LVYSNCKDREGRPLYYNVCGAFKNRELPKKLVDLEDLCD  214 (460)
Q Consensus       138 rkfdv~kA~~~l~~~l~wR~~~~~d~i~~~~~~~e-l~~--~~~~~G~Dk~GrpV~i~~~g~~d~~~l~~~~~~~~~~~~  214 (460)
                      |+||+++|.+||+++++||++++++++.. ...++ +..  ..+++|+|++||||+++++|++|+.++++.     .+.+
T Consensus        45 rkfdv~~A~~~l~~~l~wR~~~~~~~i~~-~~~~~~~~~~~~~~~~g~Dk~GrpV~~~~~g~~d~~~l~~~-----~~~~  118 (403)
T 1olm_A           45 RSFDLQKSEAMLRKHVEFRKQKDIDNIIS-WQPPEVIQQYLSGGMCGYDLDGCPVWYDIIGPLDAKGLLFS-----ASKQ  118 (403)
T ss_dssp             TTTCHHHHHHHHHHHHHHHHHTTGGGGGG-SCCCHHHHHHCCBEEEEECTTSCEEEEEECTTCCHHHHHTT-----SCHH
T ss_pred             cCCCHHHHHHHHHHHHHHHHHcCCCcccc-cCCHHHHHHhCCceeeccCCCcCEEEEEecCCCChHHhhcc-----CCHH
Confidence            99999999999999999999999988875 33333 221  235789999999999999999998776543     2468


Q ss_pred             HHHHHHHHHHHHHHHHhccC----CCCcceeEEEEeCCCCCCCCchh-HHHHHHHHHHHHhhhcccccceEEEEeCChhH
Q 045317          215 QFIRLEVKFMEKGIKELNFK----PGGANSIVQIIDLKNSKPPDIKK-FRVVSKKTVMMLQDNYPELMHRNIIINVPFWY  289 (460)
Q Consensus       215 ~~~r~~~~~~E~~~~~~~~~----~~~v~~~v~I~Dl~g~s~~~~~~-~~~~~k~~~~~lq~~YPerL~~i~IIN~P~~f  289 (460)
                      +++++.++++|.+++.+..+    +.+++++++|+||+|+++.++.. ..++++.++.++|+|||+||+++||||+|++|
T Consensus       119 ~~~r~~~~~~E~~~~~~~~~s~~~g~~v~~~~~I~D~~g~sl~~~~~~~~~~~k~~~~~lq~~YPerl~~i~iiN~P~~f  198 (403)
T 1olm_A          119 DLLRTKMRECELLLQECAHQTTKLGRKVETITIIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLF  198 (403)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTSCCCCEEEEEECTTCCGGGGCHHHHHHHHHHHHHHHHHSTTCEEEEEEESCCTTH
T ss_pred             HHHHHHHHHHHHHHHHHHhhHHhhCCcccceEEEEECCCCCHHHHhhHHHHHHHHHHHHHHhhCcHhhCeEEEEeCCHHH
Confidence            99999999999999876543    22579999999999998766543 34688999999999999999999999999999


Q ss_pred             HHHHHHHhhcCChhhcccEEEeCCccchHhHhccCCCCCCcccCCCccCCCC--C-CCC------------------Ccc
Q 045317          290 YAFHTVASKFLSPRCKRKFVFARPAKVTKTLLKFISPENLPVEYGGLYREND--D-FFP------------------EDR  348 (460)
Q Consensus       290 ~~~w~lvkpfL~~~t~~KI~~~~~~~~~~~L~e~Id~d~LP~~yGG~~~~~d--~-~~~------------------~d~  348 (460)
                      .++|+++||||+++|++||+|+++ ++.++|.++||+++||++|||++++++  | |+.                  .+.
T Consensus       199 ~~i~~~ikpfl~~~t~~KI~~~~~-~~~~~L~~~I~~~~LP~~yGG~~~~~~~~~~c~~~i~~gg~vp~~~~~~~~~~~~  277 (403)
T 1olm_A          199 PVAYNLIKPFLSEDTRKKIMVLGA-NWKEVLLKHISPDQVPVEYGGTMTDPDGNPKCKSKINYGGDIPRKYYVRDQVKQQ  277 (403)
T ss_dssp             HHHHHHHGGGSCHHHHHTEEECCT-THHHHHTTTSCGGGSBGGGTSSBCCTTCCTTCTTTCBCCCCCCGGGCSCSSCCCC
T ss_pred             HHHHHHHHhhcCHhhhceEEEECh-hHHHHHHhhcChhhCchhhCCCcCCCCCCcccccccccCCCCCcccccCCCcccc
Confidence            999999999999999999999985 778899999999999999999998864  3 431                  112


Q ss_pred             c-hhhhhccCCcceeeeeecCCCceEEEEEEeecceeEEEEEEEeCC-----CCCeEEEEeccccccCCCCcccccEEEe
Q 045317          349 T-SELIVRKNTAGSVRIPVAETGVTMMWDLTVLGWDVSYKEEFIPDD-----EGSYRVLLQSEKEKKGGEGESMRNSFYI  422 (460)
Q Consensus       349 ~-~~~~V~~g~~~~v~~~v~~~g~~l~W~f~t~~~DI~Fgi~~~~~~-----~~~~~~v~~~~~~~~~~~~~~~~g~~~~  422 (460)
                      . ++++|++|++++|+++|..+|++|+|+|+|+++||+|||+|.+..     .+++++|+|..|  ..++..+++|+++|
T Consensus       278 ~~~~~~V~~g~~~~v~~~v~~~g~~l~W~f~~~~~DI~F~v~~~~~~~~~~~~~~~~~v~p~~r--~~~~~~~~~G~~~~  355 (403)
T 1olm_A          278 YEHSVQISRGSSHQVEYEILFPGCVLRWQFMSDGADVGFGIFLKTKMGERQRAGEMTEVLPNQR--YNSHLVPEDGTLTC  355 (403)
T ss_dssp             CSEEEEECTTCEEEEEEEECSTTCEEEEEEEESSSCEEEEEEEC----CCCCGGGSEEEEEEEE--ECTTTSCEEEEEEC
T ss_pred             cceEEEEcCCCEEEEEEEEcCCCCEEEEEEEecCCcEEEEEEEecccccccCCCcceEEeeeee--ecCccccccCEEEc
Confidence            2 459999999999999999999999999999999999999998532     255788888777  44455778999999


Q ss_pred             CcCcEEEEEEECCC--ccceEEEEEEEEecCcc
Q 045317          423 SEPGKIVITIDNVT--LKNKRVYYRFKTKPAVP  453 (460)
Q Consensus       423 ~~~G~y~l~fdNs~--~~~K~v~Y~i~v~~~~~  453 (460)
                      ++||+|+|+|||+|  +++|+|+|+|+|++|+.
T Consensus       356 ~~~G~y~l~fdNs~S~~~~k~l~y~v~v~~~~~  388 (403)
T 1olm_A          356 SDPGIYVLRFDNTYSFIHAKKVNFTVEVLLPDK  388 (403)
T ss_dssp             CSCEEEEEEEECTTCCCCSEEEEEEEEEECCCH
T ss_pred             CCCeEEEEEEeccccceeceEEEEEEEEeCCcc
Confidence            99999999999999  59999999999999874
>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A* Back     alignment and structure
>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1 Back     alignment and structure
>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A* Back     alignment and structure
>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A* Back     alignment and structure
>3pg7_A Neurofibromin; SEC lipid binding domain, PH domain, lipid binding protein; HET: PTY; 2.19A {Homo sapiens} PDB: 2e2x_A* 3p7z_A* 2d4q_A* Back     alignment and structure
>2dam_A ETEA protein; KIAA0887, UBA-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 460
d1auaa2203 c.13.1.1 (A:97-299) C-terminal domain of phosphati 1e-27
d1olma3199 c.13.1.1 (A:76-274) Supernatant protein factor (SP 2e-26
d1r5la2185 c.13.1.1 (A:91-275) Alpha-tocopherol transfer prot 4e-19
d1olma2119 b.132.1.1 (A:275-393) Supernatant protein factor ( 2e-10
d1auaa193 a.5.3.1 (A:4-96) N-terminal domain of phosphatidyl 4e-10
d1olma175 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), 2e-09
d1r5la166 a.5.3.1 (A:25-90) Alpha-tocopherol transfer protei 1e-08
>d1auaa2 c.13.1.1 (A:97-299) C-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 203 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: C-terminal domain of phosphatidylinositol transfer protein sec14p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  107 bits (267), Expect = 1e-27
 Identities = 41/153 (26%), Positives = 61/153 (39%), Gaps = 1/153 (0%)

Query: 183 DREGRPLYYNVCGAFKNRELPKKLVDLEDLCDQFIRLEVKFMEKGIKELNFKPGGANSIV 242
           D++GRP+Y+   GA    E+ K   +   L +     E     +             +  
Sbjct: 19  DKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLVETSC 78

Query: 243 QIIDLKNSKPPDIKKFRVVSKKTVMMLQDNYPELMHRNIIINVPFWYYAFHTVASKFLSP 302
            I+DLK              ++   + Q+ YPE M +  IIN PF +     +   FL P
Sbjct: 79  TIMDLKGISISSAYSVMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDP 138

Query: 303 RCKRKFVFARPAKVTKTLLKFISPENLPVEYGG 335
               K      +   K LLK I  ENLPV++GG
Sbjct: 139 VTVSKIFIL-GSSYQKELLKQIPAENLPVKFGG 170
>d1olma3 c.13.1.1 (A:76-274) Supernatant protein factor (SPF), middle domain {Human (Homo sapiens) [TaxId: 9606]} Length = 199 Back     information, alignment and structure
>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Length = 185 Back     information, alignment and structure
>d1olma2 b.132.1.1 (A:275-393) Supernatant protein factor (SPF), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 119 Back     information, alignment and structure
>d1auaa1 a.5.3.1 (A:4-96) N-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 93 Back     information, alignment and structure
>d1olma1 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 75 Back     information, alignment and structure
>d1r5la1 a.5.3.1 (A:25-90) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Length = 66 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query460
d1olma3199 Supernatant protein factor (SPF), middle domain {H 100.0
d1auaa2203 C-terminal domain of phosphatidylinositol transfer 99.97
d1r5la2185 Alpha-tocopherol transfer protein {Human (Homo sap 99.96
d1olma2119 Supernatant protein factor (SPF), C-terminal domai 99.93
d1olma175 Supernatant protein factor (SPF), N-terminal domai 99.7
d1auaa193 N-terminal domain of phosphatidylinositol transfer 99.66
d1r5la166 Alpha-tocopherol transfer protein {Human (Homo sap 99.36
d2bwba144 DSK2 {Baker's yeast (Saccharomyces cerevisiae) [Ta 86.44
d2dnaa150 Ubiquilin-like protein Ubqlnl {Mouse (Mus musculus 83.99
>d1olma3 c.13.1.1 (A:76-274) Supernatant protein factor (SPF), middle domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Supernatant protein factor (SPF), middle domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-34  Score=263.31  Aligned_cols=158  Identities=23%  Similarity=0.374  Sum_probs=139.7

Q ss_pred             eeeccCCCCCeEEEEecCCCCCCCCccccccchhhHHHHHHHHHHHHHHHHHHhccC----CCCcceeEEEEeCCCCCCC
Q 045317          178 YSNCKDREGRPLYYNVCGAFKNRELPKKLVDLEDLCDQFIRLEVKFMEKGIKELNFK----PGGANSIVQIIDLKNSKPP  253 (460)
Q Consensus       178 ~~~G~Dk~GrpV~i~~~g~~d~~~l~~~~~~~~~~~~~~~r~~~~~~E~~~~~~~~~----~~~v~~~v~I~Dl~g~s~~  253 (460)
                      .++|+|++||||+++++|++|++++++..     +.++++++.++.+|.+++.+..+    +.+++++++|+||+|+++.
T Consensus        12 ~~~G~Dk~Grpv~~~r~g~~d~~~l~~~~-----~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~v~~~~~I~Dl~g~s~~   86 (199)
T d1olma3          12 GMCGYDLDGCPVWYDIIGPLDAKGLLFSA-----SKQDLLRTKMRECELLLQECAHQTTKLGRKVETITIIYDCEGLGLK   86 (199)
T ss_dssp             EEEEECTTSCEEEEEECTTCCHHHHHTTS-----CHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCEEEEEECTTCCGG
T ss_pred             ccccCCCCCCEEEEEecccCChHHhhccC-----CHHHHHHHHHHHHHHHHHHHHHHHHhcCCccceEEEEEECCCCchh
Confidence            37899999999999999999998776532     46889999999999998865432    3467899999999999876


Q ss_pred             CchhH-HHHHHHHHHHHhhhcccccceEEEEeCChhHHHHHHHHhhcCChhhcccEEEeCCccchHhHhccCCCCCCccc
Q 045317          254 DIKKF-RVVSKKTVMMLQDNYPELMHRNIIINVPFWYYAFHTVASKFLSPRCKRKFVFARPAKVTKTLLKFISPENLPVE  332 (460)
Q Consensus       254 ~~~~~-~~~~k~~~~~lq~~YPerL~~i~IIN~P~~f~~~w~lvkpfL~~~t~~KI~~~~~~~~~~~L~e~Id~d~LP~~  332 (460)
                      ++... .++++.++.++|++||||++++||||+|++|+++|+++||||+++|++||+|+++ ++.++|.++|++++||++
T Consensus        87 ~~~~~~~~~l~~~~~~~q~~YPerl~~i~iiN~P~~f~~~w~ivk~fl~~~t~~KI~~~~~-~~~~~L~~~i~~~~lP~~  165 (199)
T d1olma3          87 HLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGA-NWKEVLLKHISPDQVPVE  165 (199)
T ss_dssp             GGCHHHHHHHHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHHHHGGGSCHHHHHTEEECCT-THHHHHTTTSCGGGSBGG
T ss_pred             hhccccHHHHHHHHHHHHHHHHHhhhheEEECCCHHHHHHHHHHHHhcCHHhhccEEEeCC-CCHHHHHHhCCHhhCCHH
Confidence            66543 4789999999999999999999999999999999999999999999999999984 568999999999999999


Q ss_pred             CCCccCCCC
Q 045317          333 YGGLYREND  341 (460)
Q Consensus       333 yGG~~~~~d  341 (460)
                      |||+|+|++
T Consensus       166 yGGt~~~~~  174 (199)
T d1olma3         166 YGGTMTDPD  174 (199)
T ss_dssp             GTSSBCCTT
T ss_pred             hCCCCCCCC
Confidence            999998864
>d1auaa2 c.13.1.1 (A:97-299) C-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1olma2 b.132.1.1 (A:275-393) Supernatant protein factor (SPF), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1olma1 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1auaa1 a.5.3.1 (A:4-96) N-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1r5la1 a.5.3.1 (A:25-90) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bwba1 a.5.2.1 (A:328-371) DSK2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2dnaa1 a.5.2.1 (A:12-61) Ubiquilin-like protein Ubqlnl {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure