Citrus Sinensis ID: 045325
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 412 | ||||||
| 255556310 | 474 | conserved hypothetical protein [Ricinus | 0.990 | 0.860 | 0.727 | 1e-178 | |
| 225431882 | 465 | PREDICTED: uncharacterized protein LOC10 | 0.949 | 0.840 | 0.683 | 1e-163 | |
| 15239856 | 457 | protein trichome birefringence-like 4 [A | 0.968 | 0.873 | 0.631 | 1e-150 | |
| 297795691 | 459 | hypothetical protein ARALYDRAFT_331346 [ | 0.973 | 0.873 | 0.636 | 1e-149 | |
| 224099203 | 366 | predicted protein [Populus trichocarpa] | 0.876 | 0.986 | 0.685 | 1e-149 | |
| 357478897 | 461 | hypothetical protein MTR_4g121560 [Medic | 0.919 | 0.822 | 0.635 | 1e-147 | |
| 225441483 | 659 | PREDICTED: uncharacterized protein LOC10 | 0.834 | 0.522 | 0.652 | 1e-139 | |
| 224088182 | 590 | predicted protein [Populus trichocarpa] | 0.924 | 0.645 | 0.590 | 1e-137 | |
| 115467002 | 720 | Os06g0207500 [Oryza sativa Japonica Grou | 0.871 | 0.498 | 0.603 | 1e-136 | |
| 51091163 | 847 | lustrin A-like [Oryza sativa Japonica Gr | 0.871 | 0.423 | 0.603 | 1e-136 |
| >gi|255556310|ref|XP_002519189.1| conserved hypothetical protein [Ricinus communis] gi|223541504|gb|EEF43053.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 632 bits (1630), Expect = e-178, Method: Compositional matrix adjust.
Identities = 299/411 (72%), Positives = 347/411 (84%), Gaps = 3/411 (0%)
Query: 1 SALTSRLLFAANFYISPFSSVSSSNTCLVLDSESNCTLSSVTAVETAHANSRKDQERYN- 59
SAL SRLLFAAN YISPFSS+ SS TCLV D NCTLSSVTA+E + NSRK++ +
Sbjct: 61 SALASRLLFAAN-YISPFSSIQSSKTCLVSDLRDNCTLSSVTAMERSRRNSRKEETDDDV 119
Query: 60 RIKKLSSCDIFNGQWVVDNS-EPLYKPGSCPFIDEAFNCFKNGRPDSDYLKYKWRPIGCQ 118
+ LSSCDIFNG WV+D+ P+YKPGSCPF+D++FNCFKNGRPD YL+Y+W+P GCQ
Sbjct: 120 LLSGLSSCDIFNGSWVIDDDFGPIYKPGSCPFVDDSFNCFKNGRPDLSYLRYRWKPHGCQ 179
Query: 119 LPRFDGGKMLEMLRGKRLVFVGDSLNRNMWESLVCALRDSLKDKSRVYEVSGRQRFRTQG 178
+PRFDG LE+L+GK+LVFVGDSLNRNMWESLVCALR+SLK+KSR++EVSGR+ FRT+G
Sbjct: 180 IPRFDGRNFLELLKGKKLVFVGDSLNRNMWESLVCALRESLKNKSRIFEVSGRKEFRTRG 239
Query: 179 FYSFKFRDYMCSIDFIKSPFLVQESKFSDKSGARGETLRLDMIQGSSTKYGDADIIIFNT 238
FYSFKF DY CSIDF+KSPFLVQE K S+ +G R ETLRLDMIQG+ +KY ADIIIFNT
Sbjct: 240 FYSFKFIDYNCSIDFVKSPFLVQEVKASEDTGNRRETLRLDMIQGTFSKYHHADIIIFNT 299
Query: 239 GHWWTHHKTFKGYNYFQEGSHVYNKLEVKEAYTKALKTWAQWVDANIDSNRTRVFFRGYS 298
GHWWTH KT +G +YFQEGSHVYN+L+V EAYTKAL TWA WVDANI+S+ TRVFFRGYS
Sbjct: 300 GHWWTHQKTNRGKDYFQEGSHVYNRLKVTEAYTKALWTWAHWVDANINSSHTRVFFRGYS 359
Query: 299 ASHFRKGQWNTRGSCHGEMKPIASDTYIATYPWMMRVLESVIAEMKTPVFYLNITRMTDY 358
ASHFRK WN G C GE +P+ +DT +A YPWMM +LESVI+EMKTPVFYLNITRMTDY
Sbjct: 360 ASHFRKVPWNAVGRCDGENQPVTNDTDLAPYPWMMSILESVISEMKTPVFYLNITRMTDY 419
Query: 359 RQDGHPSIYRQREIPRGPGMFQDCSHWCLPGVPDSWNELLYATLLISHNDF 409
R+DGHPS+YRQ +I R M QDCSHWCLPGVPDSWNELLYATLL+SH+D
Sbjct: 420 RKDGHPSVYRQSKIRRDHEMIQDCSHWCLPGVPDSWNELLYATLLLSHHDL 470
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225431882|ref|XP_002271893.1| PREDICTED: uncharacterized protein LOC100246507 [Vitis vinifera] gi|296083280|emb|CBI22916.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|15239856|ref|NP_199745.1| protein trichome birefringence-like 4 [Arabidopsis thaliana] gi|10177163|dbj|BAB10352.1| unnamed protein product [Arabidopsis thaliana] gi|332008416|gb|AED95799.1| protein trichome birefringence-like 4 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|297795691|ref|XP_002865730.1| hypothetical protein ARALYDRAFT_331346 [Arabidopsis lyrata subsp. lyrata] gi|297311565|gb|EFH41989.1| hypothetical protein ARALYDRAFT_331346 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|224099203|ref|XP_002311402.1| predicted protein [Populus trichocarpa] gi|222851222|gb|EEE88769.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|357478897|ref|XP_003609734.1| hypothetical protein MTR_4g121560 [Medicago truncatula] gi|355510789|gb|AES91931.1| hypothetical protein MTR_4g121560 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|225441483|ref|XP_002280022.1| PREDICTED: uncharacterized protein LOC100255639 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224088182|ref|XP_002308359.1| predicted protein [Populus trichocarpa] gi|222854335|gb|EEE91882.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|115467002|ref|NP_001057100.1| Os06g0207500 [Oryza sativa Japonica Group] gi|113595140|dbj|BAF19014.1| Os06g0207500, partial [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
| >gi|51091163|dbj|BAD35858.1| lustrin A-like [Oryza sativa Japonica Group] gi|51091192|dbj|BAD35885.1| lustrin A-like [Oryza sativa Japonica Group] gi|125554485|gb|EAZ00091.1| hypothetical protein OsI_22096 [Oryza sativa Indica Group] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 412 | ||||||
| TAIR|locus:2155874 | 457 | TBL4 "AT5G49340" [Arabidopsis | 0.966 | 0.870 | 0.625 | 4.2e-143 | |
| TAIR|locus:2170184 | 608 | TBR [Arabidopsis thaliana (tax | 0.929 | 0.629 | 0.561 | 4.9e-124 | |
| TAIR|locus:2088659 | 556 | TBL1 "AT3G12060" [Arabidopsis | 0.907 | 0.672 | 0.571 | 1e-123 | |
| TAIR|locus:2036631 | 541 | TBL2 "AT1G60790" [Arabidopsis | 0.876 | 0.667 | 0.559 | 1.8e-117 | |
| TAIR|locus:2149947 | 485 | TBL5 "AT5G20590" [Arabidopsis | 0.834 | 0.709 | 0.495 | 1.2e-104 | |
| TAIR|locus:2096094 | 475 | TBL6 "AT3G62390" [Arabidopsis | 0.898 | 0.778 | 0.460 | 3.7e-96 | |
| TAIR|locus:2182157 | 464 | TBL11 "TRICHOME BIREFRINGENCE- | 0.837 | 0.743 | 0.455 | 5.3e-88 | |
| TAIR|locus:2080389 | 469 | TBL10 "TRICHOME BIREFRINGENCE- | 0.868 | 0.763 | 0.435 | 2.4e-85 | |
| TAIR|locus:2080767 | 427 | TBL8 "AT3G11570" [Arabidopsis | 0.813 | 0.784 | 0.418 | 5.7e-75 | |
| TAIR|locus:2037498 | 359 | TBL42 "TRICHOME BIREFRINGENCE- | 0.788 | 0.905 | 0.423 | 6.5e-74 |
| TAIR|locus:2155874 TBL4 "AT5G49340" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1399 (497.5 bits), Expect = 4.2e-143, P = 4.2e-143
Identities = 262/419 (62%), Positives = 319/419 (76%)
Query: 1 SALTSRLLFAANFYIXXXXXXXXXNTCLVLDSESNCTLSSVTAVETAHANSRK-DQERYN 59
S+ TSRLL AANF+ S++ LSSV+ N K D E
Sbjct: 47 SSFTSRLLTAANFFSSPSSYTSSA-------SDTTMFLSSVSP---RRINEPKIDSET-- 94
Query: 60 RIKKLSSCDIFNGQWVVDNSEPLYKPGSCPFIDEAFNCFKNGRPDSDYLKYKWRPIGCQL 119
K+L+SCDIF+G WV D+SEP+Y PG CPF+++ FNCFKNGRPDS +L+++W+P GC +
Sbjct: 95 --KELASCDIFDGTWVFDDSEPVYLPGYCPFVEDKFNCFKNGRPDSGFLRHRWQPHGCSI 152
Query: 120 PRFDGGKMLEMLRGKRLVFVGDSLNRNMWESLVCALRDSLKDKSRVYEVSGRQ-RFRTQG 178
PRFDG KML+MLRGKR+VFVGDSLNRNMWESLVC+LR +L+DK+RV ++ G+Q +G
Sbjct: 153 PRFDGKKMLKMLRGKRVVFVGDSLNRNMWESLVCSLRSTLEDKNRVSKIIGKQSNLPNEG 212
Query: 179 FYSFKFRDYMCSIDFIKSPFLVQESKFSDKSGARGETLRLDMIQGSSTK-YGDADIIIFN 237
FY F+F D+ CSIDFIKSPFLVQES+ D G R ETLRLDMIQ S TK Y +ADI+IFN
Sbjct: 213 FYGFRFNDFECSIDFIKSPFLVQESEVVDVYGKRRETLRLDMIQRSMTKIYKNADIVIFN 272
Query: 238 TGHWWTHHKTFKGYNYFQEGSHVYNKLEVKEAYTKALKTWAQWVDANIDSNRTRVFFRGY 297
TGHWWTH KT++G Y+QEG+ VY +LEVKEAYTKA+ TWA WVD+NI+S +TRVFF GY
Sbjct: 273 TGHWWTHQKTYEGKGYYQEGNRVYERLEVKEAYTKAIHTWADWVDSNINSTKTRVFFVGY 332
Query: 298 SASHFRKGQWNTRGSCHGEMKPIASDTYIATYPWMMRVLESVIAEMKTPVFYLNITRMTD 357
S+SHFRKG WN+ G C GE +PI ++TY YPWMM+V+ESVI+EMKTPVFY+NIT+MT
Sbjct: 333 SSSHFRKGAWNSGGQCDGETRPIQNETYTGVYPWMMKVVESVISEMKTPVFYMNITKMTW 392
Query: 358 YRQDGHPSIYRQREIPRG--P--GMFQDCSHWCLPGVPDSWNELLYATLLISHNDFTGK 412
YR DGHPS+YRQ PRG P GM+QDCSHWCLPGVPDSWN+LLYATLL+SH K
Sbjct: 393 YRTDGHPSVYRQPADPRGTSPAAGMYQDCSHWCLPGVPDSWNQLLYATLLVSHGSLPDK 451
|
|
| TAIR|locus:2170184 TBR [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2088659 TBL1 "AT3G12060" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2036631 TBL2 "AT1G60790" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2149947 TBL5 "AT5G20590" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2096094 TBL6 "AT3G62390" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2182157 TBL11 "TRICHOME BIREFRINGENCE-LIKE 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2080389 TBL10 "TRICHOME BIREFRINGENCE-LIKE 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2080767 TBL8 "AT3G11570" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2037498 TBL42 "TRICHOME BIREFRINGENCE-LIKE 42" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 412 | |||
| PLN02629 | 387 | PLN02629, PLN02629, powdery mildew resistance 5 | 1e-115 | |
| pfam13839 | 270 | pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera | 1e-111 | |
| pfam14416 | 55 | pfam14416, PMR5N, PMR5 N terminal Domain | 6e-26 |
| >gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 | Back alignment and domain information |
|---|
Score = 341 bits (877), Expect = e-115
Identities = 159/369 (43%), Positives = 225/369 (60%), Gaps = 33/369 (8%)
Query: 48 HANSRKDQERYNRIKKLSSCDIFNGQWVVDNSEPLYKPGSCP-FIDEAFNCFKNGRPDSD 106
H ++R+ + N+ S+C +F G WV D+S PLY+ CP ID FNC GRPDSD
Sbjct: 38 HHSNRRPSLQANQ----STCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSD 93
Query: 107 YLKYKWRPIGCQLPRFDGGKMLEMLRGKRLVFVGDSLNRNMWESLVCALRDSLKDKSRVY 166
YLKY+W+P+ C+LPRF+G + L ++GK ++FVGDSL RN WESL+C + S+
Sbjct: 94 YLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFVGDSLGRNQWESLICLISSSVPS----- 148
Query: 167 EVSGRQRFRTQGFYSFKFRDYMCSIDFIKSPFLVQESKFSDKSGARGE-TLRLDMIQGSS 225
+ Q R +FKF DY SI F K+P+LV D +G+ L+L+ I G++
Sbjct: 149 --TRTQMSRGDPLSTFKFLDYGVSISFYKAPYLV------DIDAVQGKRVLKLEEISGNA 200
Query: 226 TKYGDADIIIFNTGHWWTHHKTFKGYNYFQEGSHVYNKLEVKEAYTKALKTWAQWVDANI 285
+ DAD++IFNTGHWW+H + +G++Y + G Y ++ A KAL+TWA WVD N+
Sbjct: 201 NAWRDADVLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNV 260
Query: 286 DSNRTRVFFRGYSASHFRKGQWN-----TRGSCHGEMKPIASDTYIATYPWMMRVLESVI 340
D +RTRVFF+ S +H+ +W+ T +C+GE P++ TY YP MRV++ VI
Sbjct: 261 DRSRTRVFFQSISPTHYNPSEWSAGASTTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVI 320
Query: 341 AEMKTPVFYLNITRMTDYRQDGHPSIY------RQREIPRGPGMFQDCSHWCLPGVPDSW 394
M P + L+IT +++ R+DGHPSIY QR P DCSHWCLPG+PD+W
Sbjct: 321 RGMHNPAYLLDITLLSELRKDGHPSIYSGDLSPSQRA---NPDRSADCSHWCLPGLPDTW 377
Query: 395 NELLYATLL 403
N+L Y L
Sbjct: 378 NQLFYTALF 386
|
Length = 387 |
| >gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 412 | |||
| PLN02629 | 387 | powdery mildew resistance 5 | 100.0 | |
| PF13839 | 263 | PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f | 100.0 | |
| PF14416 | 55 | PMR5N: PMR5 N terminal Domain | 99.92 | |
| cd01842 | 183 | SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG | 98.08 | |
| cd01829 | 200 | SGNH_hydrolase_peri2 SGNH_peri2; putative periplas | 94.68 | |
| COG2845 | 354 | Uncharacterized protein conserved in bacteria [Fun | 93.6 | |
| cd01827 | 188 | sialate_O-acetylesterase_like1 sialate O-acetylest | 82.58 |
| >PLN02629 powdery mildew resistance 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-116 Score=882.00 Aligned_cols=360 Identities=43% Similarity=0.884 Sum_probs=318.1
Q ss_pred ccccccccchhhhhhhccCCCCchhhhhhccCCCCCcCcccccccCCCCCCcCCCCCC-CcccccccccCCCCCCCCccc
Q 045325 32 SESNCTLSSVTAVETAHANSRKDQERYNRIKKLSSCDIFNGQWVVDNSEPLYKPGSCP-FIDEAFNCFKNGRPDSDYLKY 110 (412)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cd~~~G~WV~d~~~plY~~~~Cp-~i~~~~~C~~nGRpD~~yl~W 110 (412)
.+++..++|++.+.+...+.++.+.+..-.++.+.||+|+|+||+|+++|+|++.+|| ||++++||++|||||++|++|
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~W 97 (387)
T PLN02629 18 LLQPEIASSALILSLKNHHNHHSNRRPSLQANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKY 97 (387)
T ss_pred hhccchhhhhhhhhhhcccccccCCCCCCCCCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhc
Confidence 4556667888888887766666653322234568899999999999999999999999 999999999999999999999
Q ss_pred eEecCCCCCCCCCHHHHHHHhcCCeEEEEecchhHHHHHHHHHHHhhhcCCCcceEEecCccceeeccceeEEEcccceE
Q 045325 111 KWRPIGCQLPRFDGGKMLEMLRGKRLVFVGDSLNRNMWESLVCALRDSLKDKSRVYEVSGRQRFRTQGFYSFKFRDYMCS 190 (412)
Q Consensus 111 rWqP~gC~LprFd~~~fL~~LRgK~l~FVGDSl~Rnq~eSLlCLL~~~~~~~~~~~~~~g~~~~r~~~~~~~~f~~~n~t 190 (412)
||||++|+||||||.+||++|||||||||||||+|||||||+|||+++++...+... +..++..|+|++||+|
T Consensus 98 RWqP~gC~LPRFda~~fLe~~RgKrl~FVGDSL~RNQ~eSLvClL~~~~p~~~~~~~-------~~~~~~~~~F~~yN~T 170 (387)
T PLN02629 98 RWQPLNCELPRFNGLEFLLKMKGKTVMFVGDSLGRNQWESLICLISSSVPSTRTQMS-------RGDPLSTFKFLDYGVS 170 (387)
T ss_pred cccCCCCCCCCcCHHHHHHHhcCCeEEEeccccchhHHHHHHHHhhccCCCCceeee-------cCCceEEEEeccCCEE
Confidence 999999999999999999999999999999999999999999999997765432221 1123458999999999
Q ss_pred EEEEeCcccccccccCCCCCCCccceeccccccccccCCCccEEEEcCcccccccccccccceeecCceecccccHHHHH
Q 045325 191 IDFIKSPFLVQESKFSDKSGARGETLRLDMIQGSSTKYGDADIIIFNTGHWWTHHKTFKGYNYFQEGSHVYNKLEVKEAY 270 (412)
Q Consensus 191 v~f~wsPfLV~~~~~~~~~g~~~~~l~lD~~~~~~~~~~~~DvlV~ntG~Ww~~~~~~~~~~~~~~g~~~~~~~~~~~ay 270 (412)
|+||||||||+.... . ..++|+||.++.+++.|+++|||||||||||.+.+..++++||+.|..++++|++.+||
T Consensus 171 V~~ywspfLV~~~~~---~--~~~~l~LD~id~~a~~w~~~DvlVfntghWw~~~~~~~~~~~~~~g~~~~~~~~~~~A~ 245 (387)
T PLN02629 171 ISFYKAPYLVDIDAV---Q--GKRVLKLEEISGNANAWRDADVLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDRLVAL 245 (387)
T ss_pred EEEEecceEEeeecC---C--CceeEEecCcchhhhhhccCCEEEEeCccccCCCCeeEEeeeeccCCccccCccHHHHH
Confidence 999999999986532 1 23579999999877889999999999999999998888999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEEEecCCCCCCcccCCCCC-----CCCCCCccCCCCCccCCchhHHHHHHHHHHhcCC
Q 045325 271 TKALKTWAQWVDANIDSNRTRVFFRGYSASHFRKGQWNTRG-----SCHGEMKPIASDTYIATYPWMMRVLESVIAEMKT 345 (412)
Q Consensus 271 r~aL~t~~~wv~~~~~~~k~~VffRt~SP~Hf~~g~Wn~gg-----~C~~~T~P~~~~~~~~~~~~~~~~ve~~~~~~~~ 345 (412)
++||+||++||++++++.+++|||||+||+||+||+||+|| +|+++|+|+.++++.+..+.+++++++++++++.
T Consensus 246 r~al~T~~~wv~~~~~~~kt~vffrT~SP~Hfe~g~Wn~gg~~~~~~C~~et~P~~~~~~~~~~~~~~~~ve~v~~~~~~ 325 (387)
T PLN02629 246 EKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAGASTTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHN 325 (387)
T ss_pred HHHHHHHHHHHHhcCCCCCcEEEEEecCcccccCCCcCCCCCCCCCCCccCCccCcCccccCcchHHHHHHHHHHHhcCC
Confidence 99999999999999988999999999999999999999875 6999999999877777788889999999999999
Q ss_pred CeEEeecccccccccCCCCCcccCC---CCCCCCCCCCCcccccCCCchhHHHHHHHHHHH
Q 045325 346 PVFYLNITRMTDYRQDGHPSIYRQR---EIPRGPGMFQDCSHWCLPGVPDSWNELLYATLL 403 (412)
Q Consensus 346 ~v~lLDIT~ls~~R~DgHps~y~~~---~~~~~~~~~~DC~HWCLPGv~DtWNelL~~~L~ 403 (412)
+|+|||||+||++|||||||+|+++ ++++++..++||+||||||||||||||||++|+
T Consensus 326 ~v~lLDIT~ls~lR~DgHPs~Y~~~~~~~~~~~p~~~~DC~HWCLPGvpDTWNelL~a~L~ 386 (387)
T PLN02629 326 PAYLLDITLLSELRKDGHPSIYSGDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALF 386 (387)
T ss_pred ceEEEechhhhhcCCCCCcccccCCCchhhccCCCCCCCcccccCCCCCccHHHHHHHHHh
Confidence 9999999999999999999999753 345566678999999999999999999999997
|
|
| >PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >PF14416 PMR5N: PMR5 N terminal Domain | Back alignment and domain information |
|---|
| >cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >COG2845 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 412 | |||
| 1qzv_F | 154 | Plant photosystem I: subunit PSAF; photosynthesis, | 3e-05 |
| >1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 | Back alignment and structure |
|---|
Score = 43.0 bits (100), Expect = 3e-05
Identities = 10/41 (24%), Positives = 14/41 (34%), Gaps = 15/41 (36%)
Query: 56 ERYNRIKKLSSCDIFNGQWVVDNSEPLYKPGSCPFIDEAFN 96
E+ +KKL + S LY S P + A
Sbjct: 18 EK-QALKKLQA------------SLKLYADDSAPAL--AIK 43
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 412 | |||
| 4h08_A | 200 | Putative hydrolase; GDSL-like lipase/acylhydrolase | 96.9 |
| >4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.005 Score=54.73 Aligned_cols=51 Identities=16% Similarity=0.282 Sum_probs=35.8
Q ss_pred CCccEEEEcCcccccccccccccceeecCceecccccHHHHHHHHHHHHHHHHHHhcCCCCceEEEEecCCCC
Q 045325 229 GDADIIIFNTGHWWTHHKTFKGYNYFQEGSHVYNKLEVKEAYTKALKTWAQWVDANIDSNRTRVFFRGYSASH 301 (412)
Q Consensus 229 ~~~DvlV~ntG~Ww~~~~~~~~~~~~~~g~~~~~~~~~~~ayr~aL~t~~~wv~~~~~~~k~~VffRt~SP~H 301 (412)
..+|+|||+.|..=.. ...+.|++.|+.+.+-+.+. .++++|+|-+..|..
T Consensus 73 ~~pd~Vvi~~G~ND~~--------------------~~~~~~~~~l~~ii~~l~~~--~p~~~ii~~~~~P~~ 123 (200)
T 4h08_A 73 TKFDVIHFNNGLHGFD--------------------YTEEEYDKSFPKLIKIIRKY--APKAKLIWANTTPVR 123 (200)
T ss_dssp SCCSEEEECCCSSCTT--------------------SCHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCCE
T ss_pred CCCCeEEEEeeeCCCC--------------------CCHHHHHHHHHHHHHHHhhh--CCCccEEEeccCCCc
Confidence 5689999999876110 11356888888887766554 356789999988854
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 412 | |||
| d2o14a2 | 208 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 96.46 | |
| d3bzwa1 | 248 | Uncharacterized protein BT2961 {Bacteroides thetai | 82.12 |
| >d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: YxiM C-terminal domain-like domain: Hypothetical protein YxiM species: Bacillus subtilis [TaxId: 1423]
Probab=96.46 E-value=0.0036 Score=53.84 Aligned_cols=16 Identities=25% Similarity=0.306 Sum_probs=13.8
Q ss_pred hcCCeEEEEecchhHH
Q 045325 131 LRGKRLVFVGDSLNRN 146 (412)
Q Consensus 131 LRgK~l~FVGDSl~Rn 146 (412)
++||+|+++|||++-+
T Consensus 1 ~~~~ti~~~GDS~~~g 16 (208)
T d2o14a2 1 VTNRTIYVGGDSTVCN 16 (208)
T ss_dssp CCCCEEEEEECTTTSC
T ss_pred CCCCEEEEEEcccccC
Confidence 5799999999998843
|
| >d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|