Citrus Sinensis ID: 045354
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 615 | 2.2.26 [Sep-21-2011] | |||||||
| P49676 | 828 | Beta-galactosidase OS=Bra | N/A | no | 0.973 | 0.723 | 0.574 | 0.0 | |
| Q9SCV5 | 826 | Beta-galactosidase 7 OS=A | yes | no | 0.972 | 0.723 | 0.564 | 0.0 | |
| Q9C6W4 | 779 | Beta-galactosidase 15 OS= | no | no | 0.895 | 0.707 | 0.560 | 0.0 | |
| Q8RUV9 | 827 | Beta-galactosidase 1 OS=O | yes | no | 0.973 | 0.724 | 0.506 | 0.0 | |
| Q7G3T8 | 828 | Beta-galactosidase 13 OS= | no | no | 0.973 | 0.723 | 0.504 | 0.0 | |
| Q9SCV4 | 852 | Beta-galactosidase 8 OS=A | no | no | 0.967 | 0.698 | 0.516 | 1e-180 | |
| Q10NX8 | 858 | Beta-galactosidase 6 OS=O | no | no | 0.982 | 0.703 | 0.501 | 1e-177 | |
| Q7XFK2 | 808 | Beta-galactosidase 14 OS= | no | no | 0.943 | 0.717 | 0.507 | 1e-172 | |
| Q9FN08 | 741 | Beta-galactosidase 10 OS= | no | no | 0.972 | 0.807 | 0.474 | 1e-170 | |
| Q67VU7 | 809 | Putative beta-galactosida | no | no | 0.941 | 0.715 | 0.492 | 1e-170 |
| >sp|P49676|BGAL_BRAOL Beta-galactosidase OS=Brassica oleracea PE=2 SV=1 | Back alignment and function desciption |
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Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/620 (57%), Positives = 442/620 (71%), Gaps = 21/620 (3%)
Query: 3 QYDFSGNLDFIKFFKLVQEAGLYAIIRIGPYVCSEWNYGGFPVWLHNIPGIQLRTNNEIY 62
QYDFSGNLD ++F K +Q AGLY+++RIGPYVC+EWNYGGFPVWLHN+P ++ RT N +
Sbjct: 88 QYDFSGNLDLVRFIKTIQSAGLYSVLRIGPYVCAEWNYGGFPVWLHNMPDMKFRTINPGF 147
Query: 63 KNEMQIFTTKIVNMCKEANLFAPQGGPIILAQIENEYGNIMGPYKEAGKSYINWCAQMAT 122
NEMQ FTTKIVNM KE +LFA QGGPIILAQIENEYGN++ Y GK+YI+WCA MA
Sbjct: 148 MNEMQNFTTKIVNMMKEESLFASQGGPIILAQIENEYGNVISSYGAEGKAYIDWCANMAN 207
Query: 123 SQNIGVPWIMCQQSDAPQPMINTCNGFYCDEFVPNNPKSPKMWTENWTGWFKKWGDKDPH 182
S +IGVPWIMCQQ APQPMI TCNGFYCD++ P+NP SPKMWTENWTGWFK WG K P+
Sbjct: 208 SLDIGVPWIMCQQPHAPQPMIETCNGFYCDQYKPSNPSSPKMWTENWTGWFKNWGGKHPY 267
Query: 183 RTPQDVSFAVARFFQAGGVLQNYYMYHGGTNFGRDAGGPFIITSYDYDAPLDEYGNLNQP 242
RT +D++F+VARFFQ GG QNYYMYHGGTNFGR AGGP+I TSYDYDAPLDEYGNLNQP
Sbjct: 268 RTAEDLAFSVARFFQTGGTFQNYYMYHGGTNFGRVAGGPYITTSYDYDAPLDEYGNLNQP 327
Query: 243 KWGHLKQLHEAIKLGEKLLTSGNVTTKQFGNGVNLTTYSNTTSGERFCFLSNTNTSQDAN 302
KWGHLKQLH +K EK LT GN++T GN V T YS T+ + CF+ N N + DA
Sbjct: 328 KWGHLKQLHTLLKSMEKPLTYGNISTIDLGNSVTATVYS--TNEKSSCFIGNVNATADAL 385
Query: 303 VDLQQDGK-YFVPAWSVSILHGCNKEVYNTAKVNTETTVMVKKPIELGTKLSWMWAQE-- 359
V+ + GK Y VPAWSVS+L C+KE YNTA+VNT+T+++ + + KL W W E
Sbjct: 386 VNFK--GKDYNVPAWSVSVLPDCDKEAYNTARVNTQTSIITEDSCDEPEKLKWTWRPEFT 443
Query: 360 TIRDTLHGKGRFNATKLIEQKEATSDESDYLWYMTSIENMGKS---SHNATLYVKSSGQV 416
T + L G G A L++QK+ T+D SDYLWYMT + K S N +L V S+ V
Sbjct: 444 TQKTILKGSGDLIAKGLVDQKDVTNDASDYLWYMTRVHLDKKDPIWSRNMSLRVHSNAHV 503
Query: 417 LHAYVNSKHIGSQF----GYDFEFKQPAILRPGKNFLTLLSATVGLQNYGEFFDLGPEGL 472
LHAYVN K++G+Q +D+ F++ L G N L LLS +VGLQNYG FF+ GP G+
Sbjct: 504 LHAYVNGKYVGNQIVRDNKFDYRFEKKVNLVHGTNHLALLSVSVGLQNYGPFFESGPTGI 563
Query: 473 AGGPVEL---NVDGMASLNLSSNIWNYKVGLNGEAKRLYDPNSP--HPQIWKSSKKLPIG 527
GPV+L D +LS + W+YK+GLNG +L+ S H + W S++KLP
Sbjct: 564 -NGPVKLVGYKGDETIEKDLSKHQWDYKIGLNGFNHKLFSMKSAGHHHRKW-STEKLPAD 621
Query: 528 KPMKWYRTSFKIPPGTSPVVVDLQGMGKGHAWVNGNSLGRYWPSQIADTNGCSDTCDYRG 587
+ + WY+ +FK P G PV+VDL G+GKG W+NG S+GRYWPS + GC++ CDYRG
Sbjct: 622 RMLSWYKANFKAPLGKDPVIVDLNGLGKGEVWINGQSIGRYWPSFNSSDEGCTEECDYRG 681
Query: 588 EYKPEKCVTNCGNPSQRWYN 607
EY +KC CG P+QRWY+
Sbjct: 682 EYGSDKCAFMCGKPTQRWYH 701
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Brassica oleracea (taxid: 3712) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 3 |
| >sp|Q9SCV5|BGAL7_ARATH Beta-galactosidase 7 OS=Arabidopsis thaliana GN=BGAL7 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q9C6W4|BGA15_ARATH Beta-galactosidase 15 OS=Arabidopsis thaliana GN=BGAL15 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q8RUV9|BGAL1_ORYSJ Beta-galactosidase 1 OS=Oryza sativa subsp. japonica GN=Os01g0533400 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q7G3T8|BGA13_ORYSJ Beta-galactosidase 13 OS=Oryza sativa subsp. japonica GN=Os10g0330600 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9SCV4|BGAL8_ARATH Beta-galactosidase 8 OS=Arabidopsis thaliana GN=BGAL8 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q10NX8|BGAL6_ORYSJ Beta-galactosidase 6 OS=Oryza sativa subsp. japonica GN=Os03g0255100 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q7XFK2|BGA14_ORYSJ Beta-galactosidase 14 OS=Oryza sativa subsp. japonica GN=Os10g0340600 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9FN08|BGA10_ARATH Beta-galactosidase 10 OS=Arabidopsis thaliana GN=BGAL10 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q67VU7|BGA10_ORYSJ Putative beta-galactosidase 10 OS=Oryza sativa subsp. japonica GN=Os06g0628500 PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 615 | ||||||
| 224068510 | 824 | predicted protein [Populus trichocarpa] | 0.978 | 0.730 | 0.712 | 0.0 | |
| 224142776 | 749 | predicted protein [Populus trichocarpa] | 0.983 | 0.807 | 0.676 | 0.0 | |
| 449476344 | 803 | PREDICTED: beta-galactosidase 7-like [Cu | 0.985 | 0.754 | 0.680 | 0.0 | |
| 449485873 | 813 | PREDICTED: LOW QUALITY PROTEIN: beta-gal | 0.985 | 0.745 | 0.671 | 0.0 | |
| 356558952 | 826 | PREDICTED: beta-galactosidase 7-like [Gl | 0.982 | 0.731 | 0.681 | 0.0 | |
| 449436000 | 838 | PREDICTED: beta-galactosidase 7-like [Cu | 0.985 | 0.723 | 0.669 | 0.0 | |
| 449529435 | 826 | PREDICTED: beta-galactosidase 7-like [Cu | 0.985 | 0.733 | 0.666 | 0.0 | |
| 449442765 | 803 | PREDICTED: LOW QUALITY PROTEIN: beta-gal | 0.970 | 0.743 | 0.664 | 0.0 | |
| 449451942 | 613 | PREDICTED: beta-galactosidase 7-like [Cu | 0.928 | 0.931 | 0.682 | 0.0 | |
| 357484129 | 806 | Beta-galactosidase [Medicago truncatula] | 0.982 | 0.749 | 0.647 | 0.0 |
| >gi|224068510|ref|XP_002326135.1| predicted protein [Populus trichocarpa] gi|222833328|gb|EEE71805.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 915 bits (2364), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/608 (71%), Positives = 498/608 (81%), Gaps = 6/608 (0%)
Query: 3 QYDFSGNLDFIKFFKLVQEAGLYAIIRIGPYVCSEWNYGGFPVWLHNIPGIQLRTNNEIY 62
+Y+F+GNLDF+KFF+ VQEAGLY I+RIGPY C+EWNYGGFPVWLHNIP I+ RT+NEI+
Sbjct: 91 EYNFTGNLDFVKFFQKVQEAGLYGILRIGPYACAEWNYGGFPVWLHNIPEIKFRTDNEIF 150
Query: 63 KNEMQIFTTKIVNMCKEANLFAPQGGPIILAQIENEYGNIMGPYKEAGKSYINWCAQMAT 122
KNEMQ FTTKIVNM KEA LFA QGGPIILAQIENEYGN+MGPY EAGKSY+ WCAQMA
Sbjct: 151 KNEMQTFTTKIVNMAKEAKLFASQGGPIILAQIENEYGNVMGPYGEAGKSYVQWCAQMAV 210
Query: 123 SQNIGVPWIMCQQSDAPQPMINTCNGFYCDEFVPNNPKSPKMWTENWTGWFKKWGDKDPH 182
+QNIGVPWIMCQQSDAP +INTCNGFYCD F PN+PKSPKMWTENWTGW+KKWG KDPH
Sbjct: 211 AQNIGVPWIMCQQSDAPSSVINTCNGFYCDTFTPNSPKSPKMWTENWTGWYKKWGQKDPH 270
Query: 183 RTPQDVSFAVARFFQAGGVLQNYYMYHGGTNFGRDAGGPFIITSYDYDAPLDEYGNLNQP 242
RT +D++F+VARFFQ GVLQNYYMY+GGTNFGR +GGPFI TSYDYDAPLDEYGNLNQP
Sbjct: 271 RTAEDLAFSVARFFQYNGVLQNYYMYYGGTNFGRTSGGPFIATSYDYDAPLDEYGNLNQP 330
Query: 243 KWGHLKQLHEAIKLGEKLLTSGNVTTKQFGNG-VNLTTYSNTTSGERFCFLSNTNTSQDA 301
KWGHLK LH A+KLGEK+LT+ V T ++ +G V LTTY++ GER CFLSNT
Sbjct: 331 KWGHLKNLHAALKLGEKILTNSTVKTTKYSDGWVELTTYTSNIDGERLCFLSNTKM-DGL 389
Query: 302 NVDLQQDGKYFVPAWSVSILHGCNKEVYNTAKVNTETTVMVKKPIELGT--KLSWMWAQE 359
+VDLQQDGKYFVPAWSVSIL CNKE YNTAKVN +T+++VKK E T KLSW WA E
Sbjct: 390 DVDLQQDGKYFVPAWSVSILQDCNKETYNTAKVNVQTSLIVKKLHENDTPLKLSWEWAPE 449
Query: 360 TIRDTLHGKGRFNATKLIEQKEATSDESDYLWYMTSIENMGKSSHNATLYVKSSGQVLHA 419
+ LHG+G F AT+L+EQK AT DESDYLWYMTS++N G +S N TL VK SGQ LHA
Sbjct: 450 PTKAPLHGQGGFKATQLLEQKAATYDESDYLWYMTSVDNNGTASKNVTLRVKYSGQFLHA 509
Query: 420 YVNSKHIGSQFGYDFEFKQPAILRPGKNFLTLLSATVGLQNYGEFFDLGPEGLAGGPVEL 479
+VN K IGSQ GY F F++PA+L+PG N ++LLSATVGLQNYGEFFD GPEG+AGGPVEL
Sbjct: 510 FVNGKEIGSQHGYTFTFEKPALLKPGTNIISLLSATVGLQNYGEFFDEGPEGIAGGPVEL 569
Query: 480 NVDGMASLNLSSNIWNYKVGLNGEAKRLYDPNSPHPQIWKSSKKLPIGKPMKWYRTSFKI 539
G + +LSSN W+YKVGLNGE R YDP S + W S L +G+ M WY+T+F+
Sbjct: 570 IDSGNTTTDLSSNEWSYKVGLNGEGGRFYDPTSGRAK-WVSG-NLRVGRAMTWYKTTFQA 627
Query: 540 PPGTSPVVVDLQGMGKGHAWVNGNSLGRYWPSQIADTNGCSDTCDYRGEYKPEKCVTNCG 599
P GT PVVVDLQGMGKGHAWVNGNSLGR+WP AD NGC CDYRG+YK KC++NCG
Sbjct: 628 PSGTEPVVVDLQGMGKGHAWVNGNSLGRFWPILTADPNGCDGKCDYRGQYKEGKCLSNCG 687
Query: 600 NPSQRWYN 607
NP+QRWY+
Sbjct: 688 NPTQRWYH 695
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224142776|ref|XP_002324727.1| predicted protein [Populus trichocarpa] gi|222866161|gb|EEF03292.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|449476344|ref|XP_004154711.1| PREDICTED: beta-galactosidase 7-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449485873|ref|XP_004157296.1| PREDICTED: LOW QUALITY PROTEIN: beta-galactosidase 7-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356558952|ref|XP_003547766.1| PREDICTED: beta-galactosidase 7-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|449436000|ref|XP_004135782.1| PREDICTED: beta-galactosidase 7-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449529435|ref|XP_004171705.1| PREDICTED: beta-galactosidase 7-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449442765|ref|XP_004139151.1| PREDICTED: LOW QUALITY PROTEIN: beta-galactosidase 7-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449451942|ref|XP_004143719.1| PREDICTED: beta-galactosidase 7-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|357484129|ref|XP_003612351.1| Beta-galactosidase [Medicago truncatula] gi|355513686|gb|AES95309.1| Beta-galactosidase [Medicago truncatula] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 615 | ||||||
| TAIR|locus:2180439 | 826 | BGAL7 "beta-galactosidase 7" [ | 0.972 | 0.723 | 0.566 | 7.8e-197 | |
| TAIR|locus:2056623 | 852 | BGAL8 "beta-galactosidase 8" [ | 0.967 | 0.698 | 0.522 | 1.2e-170 | |
| TAIR|locus:2163951 | 741 | BGAL10 "beta-galactosidase 10" | 0.975 | 0.809 | 0.477 | 2.2e-162 | |
| TAIR|locus:2091496 | 847 | BGAL1 "beta galactosidase 1" [ | 0.969 | 0.703 | 0.493 | 1.3e-155 | |
| TAIR|locus:2115310 | 856 | BGAL3 "beta-galactosidase 3" [ | 0.962 | 0.691 | 0.482 | 4.5e-153 | |
| TAIR|locus:2046452 | 887 | BGAL9 "beta galactosidase 9" [ | 0.547 | 0.379 | 0.540 | 3.5e-152 | |
| TAIR|locus:2028265 | 732 | BGAL5 "beta-galactosidase 5" [ | 0.965 | 0.811 | 0.459 | 5.1e-145 | |
| TAIR|locus:2120830 | 728 | BGAL12 "beta-galactosidase 12" | 0.970 | 0.820 | 0.455 | 8.4e-145 | |
| TAIR|locus:2085131 | 727 | BGAL2 "beta-galactosidase 2" [ | 0.965 | 0.817 | 0.466 | 2.2e-144 | |
| TAIR|locus:2170282 | 724 | BGAL4 "beta-galactosidase 4" [ | 0.967 | 0.821 | 0.457 | 2.6e-143 |
| TAIR|locus:2180439 BGAL7 "beta-galactosidase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1906 (676.0 bits), Expect = 7.8e-197, P = 7.8e-197
Identities = 350/618 (56%), Positives = 441/618 (71%)
Query: 3 QYDFSGNLDFIKFFKLVQEAGLYAIIRIGPYVCSEWNYGGFPVWLHNIPGIQLRTNNEIY 62
+YDFSGNLD ++F K +Q+AGLY+++RIGPYVC+EWNYGGFPVWLHN+P ++ RT N +
Sbjct: 89 EYDFSGNLDVVRFIKTIQDAGLYSVLRIGPYVCAEWNYGGFPVWLHNMPNMKFRTVNPSF 148
Query: 63 KNEMQIFTTKIVNMCKEANLFAPQGGPIILAQIENEYGNIMGPYKEAGKSYINWCAQMAT 122
NEMQ FTTKIV M KE LFA QGGPIILAQIENEYGN++ Y GK+YI+WCA MA
Sbjct: 149 MNEMQNFTTKIVKMMKEEKLFASQGGPIILAQIENEYGNVISSYGAEGKAYIDWCANMAN 208
Query: 123 SQNIGVPWIMCQQSDAPQPMINTCNGFYCDEFVPNNPKSPKMWTENWTGWFKKWGDKDPH 182
S +IGVPW+MCQQ +APQPM+ TCNGFYCD++ P NP +PKMWTENWTGWFK WG K P+
Sbjct: 209 SLDIGVPWLMCQQPNAPQPMLETCNGFYCDQYEPTNPSTPKMWTENWTGWFKNWGGKHPY 268
Query: 183 RTPQDVSFAVARFFQAGGVLQNYYMYHGGTNFGRDAGGPFIITSYDYDAPLDEYGNLNQP 242
RT +D++F+VARFFQ GG QNYYMYHGGTNFGR AGGP+I TSYDY APLDE+GNLNQP
Sbjct: 269 RTAEDLAFSVARFFQTGGTFQNYYMYHGGTNFGRVAGGPYITTSYDYHAPLDEFGNLNQP 328
Query: 243 KWGHLKQLHEAIKLGEKLLTSGNVTTKQFGNGVNLTTYSNTTSGERFCFLSNTNTSQDAN 302
KWGHLKQLH +K EK LT GN++ GN + T Y+ T G CF+ N N + DA
Sbjct: 329 KWGHLKQLHTVLKSMEKSLTYGNISRIDLGNSIKATIYT-TKEGSS-CFIGNVNATADAL 386
Query: 303 VDLQQDGK-YFVPAWSVSILHGCNKEVYNTAKVNTETTVMVKKPIELGTKLSWMWAQETI 361
V+ + GK Y VPAWSVS+L C+KE YNTAKVNT+T++M + + +L W W E+
Sbjct: 387 VNFK--GKDYHVPAWSVSVLPDCDKEAYNTAKVNTQTSIMTEDSSK-PERLEWTWRPESA 443
Query: 362 RDT-LHGKGRFNATKLIEQKEATSDESDYLWYMTSIENMGKS---SHNATLYVKSSGQVL 417
+ L G G A L++QK+ T+D SDYLWYMT + K S N TL V S+ VL
Sbjct: 444 QKMILKGSGDLIAKGLVDQKDVTNDASDYLWYMTRLHLDKKDPLWSRNMTLRVHSNAHVL 503
Query: 418 HAYVNSKHIGSQF---G-YDFEFKQPAI-LRPGKNFLTLLSATVGLQNYGEFFDLGPEGL 472
HAYVN K++G+QF G +D+ F++ L G N ++LLS +VGLQNYG FF+ GP G+
Sbjct: 504 HAYVNGKYVGNQFVKDGKFDYRFERKVNHLVHGTNHISLLSVSVGLQNYGPFFESGPTGI 563
Query: 473 AGGPVEL-NVDGMASL--NLSSNIWNYKVGLNGEAKRLYDPNSPHPQIWKSSKKLPIGKP 529
GPV L G ++ +LS + W+YK+GLNG +L+ S Q W +++KLP G+
Sbjct: 564 -NGPVSLVGYKGEETIEKDLSQHQWDYKIGLNGYNDKLFSIKSVGHQKW-ANEKLPTGRM 621
Query: 530 MKWYRTSFKIPPGTSPVVVDLQGMGKGHAWVNGNSLGRYWPSQIADTNGCSDTCDYRGEY 589
+ WY+ FK P G PV+VDL G+GKG AW+NG S+GRYWPS + +GC D CDYRG Y
Sbjct: 622 LTWYKAKFKAPLGKEPVIVDLNGLGKGEAWINGQSIGRYWPSFNSSDDGCKDECDYRGAY 681
Query: 590 KPEKCVTNCGNPSQRWYN 607
+KC CG P+QRWY+
Sbjct: 682 GSDKCAFMCGKPTQRWYH 699
|
|
| TAIR|locus:2056623 BGAL8 "beta-galactosidase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2163951 BGAL10 "beta-galactosidase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2091496 BGAL1 "beta galactosidase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2115310 BGAL3 "beta-galactosidase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2046452 BGAL9 "beta galactosidase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2028265 BGAL5 "beta-galactosidase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2120830 BGAL12 "beta-galactosidase 12" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2085131 BGAL2 "beta-galactosidase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2170282 BGAL4 "beta-galactosidase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9SCV5 | BGAL7_ARATH | 3, ., 2, ., 1, ., 2, 3 | 0.5647 | 0.9723 | 0.7239 | yes | no |
| Q8RUV9 | BGAL1_ORYSJ | 3, ., 2, ., 1, ., 2, 3 | 0.5064 | 0.9739 | 0.7243 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.2.1.23 | 0.914 |
| 3rd Layer | 3.2.1 | 0.921 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 615 | |||
| PLN03059 | 840 | PLN03059, PLN03059, beta-galactosidase; Provisiona | 0.0 | |
| pfam01301 | 318 | pfam01301, Glyco_hydro_35, Glycosyl hydrolases fam | 1e-122 | |
| COG1874 | 673 | COG1874, LacA, Beta-galactosidase [Carbohydrate tr | 4e-08 |
| >gnl|CDD|166698 PLN03059, PLN03059, beta-galactosidase; Provisional | Back alignment and domain information |
|---|
Score = 569 bits (1468), Expect = 0.0
Identities = 280/616 (45%), Positives = 366/616 (59%), Gaps = 22/616 (3%)
Query: 3 QYDFSGNLDFIKFFKLVQEAGLYAIIRIGPYVCSEWNYGGFPVWLHNIPGIQLRTNNEIY 62
Y F D +KF K+VQ AGLY +RIGPY+C+EWN+GGFPVWL +PGI+ RT+N +
Sbjct: 91 NYYFEDRYDLVKFIKVVQAAGLYVHLRIGPYICAEWNFGGFPVWLKYVPGIEFRTDNGPF 150
Query: 63 KNEMQIFTTKIVNMCKEANLFAPQGGPIILAQIENEYGNIMGPYKEAGKSYINWCAQMAT 122
K MQ FT KIV+M K LF PQGGPIIL+QIENEYG + GK+Y W A MA
Sbjct: 151 KAAMQKFTEKIVDMMKSEKLFEPQGGPIILSQIENEYGPVEWEIGAPGKAYTKWAADMAV 210
Query: 123 SQNIGVPWIMCQQSDAPQPMINTCNGFYCDEFVPNNPKSPKMWTENWTGWFKKWGDKDPH 182
GVPW+MC+Q DAP P+I+TCNGFYC+ F PN PKMWTE WTGW+ ++G P+
Sbjct: 211 KLGTGVPWVMCKQEDAPDPVIDTCNGFYCENFKPNKDYKPKMWTEAWTGWYTEFGGAVPN 270
Query: 183 RTPQDVSFAVARFFQAGGVLQNYYMYHGGTNFGRDAGGPFIITSYDYDAPLDEYGNLNQP 242
R +D++F+VARF Q GG NYYMYHGGTNFGR AGGPFI TSYDYDAPLDEYG +P
Sbjct: 271 RPAEDLAFSVARFIQNGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLPREP 330
Query: 243 KWGHLKQLHEAIKLGEKLLTSGNVTTKQFGNGVNLTTYSNTTSGERFCFLSNTNTSQDAN 302
KWGHL+ LH+AIKL E L S + T G+ + + ++ FL+N +T
Sbjct: 331 KWGHLRDLHKAIKLCEPALVSVDPTVTSLGSNQEAHVFKSKSACA--AFLANYDTKYSVK 388
Query: 303 VDLQQDGKYFVPAWSVSILHGCNKEVYNTAKVNTETTVMVKKPIELGTKLSWMWAQETIR 362
V +G+Y +P WSVSIL C V+NTA++ +++ M P+ G+ SW Q
Sbjct: 389 VTF-GNGQYDLPPWSVSILPDCKTAVFNTARLGAQSSQMKMNPV--GSTFSW---QSYNE 442
Query: 363 DTLHGKGRFNAT--KLIEQKEATSDESDYLWYMTSI-----ENMGKSSHNATLYVKSSGQ 415
+T T L EQ T D +DYLWYMT + E K+ L + S+G
Sbjct: 443 ETASAYTDDTTTMDGLWEQINVTRDATDYLWYMTEVHIDPDEGFLKTGQYPVLTIFSAGH 502
Query: 416 VLHAYVNSKHIGSQFGY----DFEFKQPAILRPGKNFLTLLSATVGLQNYGEFFDLGPEG 471
LH ++N + G+ +G F Q L G N ++LLS VGL N G F+ G
Sbjct: 503 ALHVFINGQLAGTVYGELSNPKLTFSQNVKLTVGINKISLLSVAVGLPNVGLHFETWNAG 562
Query: 472 LAGGPVELNVDGMASLNLSSNIWNYKVGLNGEAKRLYDPNSPHPQIWKSSKKLPIGKPMK 531
+ GPV L + +LS W+YK+GL GEA L+ W L +P+
Sbjct: 563 VL-GPVTLKGLNEGTRDLSGWKWSYKIGLKGEALSLHTITGSSSVEWVEGSLLAQKQPLT 621
Query: 532 WYRTSFKIPPGTSPVVVDLQGMGKGHAWVNGNSLGRYWPSQIADTNGCSDTCDYRGEYKP 591
WY+T+F P G P+ +D+ MGKG W+NG S+GR+WP+ A + C+ C+Y G +
Sbjct: 622 WYKTTFDAPGGNDPLALDMSSMGKGQIWINGQSIGRHWPAYTAHGS-CNG-CNYAGTFDD 679
Query: 592 EKCVTNCGNPSQRWYN 607
+KC TNCG PSQRWY+
Sbjct: 680 KKCRTNCGEPSQRWYH 695
|
Length = 840 |
| >gnl|CDD|216423 pfam01301, Glyco_hydro_35, Glycosyl hydrolases family 35 | Back alignment and domain information |
|---|
| >gnl|CDD|224786 COG1874, LacA, Beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 615 | |||
| PLN03059 | 840 | beta-galactosidase; Provisional | 100.0 | |
| KOG0496 | 649 | consensus Beta-galactosidase [Carbohydrate transpo | 100.0 | |
| PF01301 | 319 | Glyco_hydro_35: Glycosyl hydrolases family 35; Int | 100.0 | |
| COG1874 | 673 | LacA Beta-galactosidase [Carbohydrate transport an | 99.77 | |
| PF02449 | 374 | Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 | 99.22 | |
| PF13364 | 111 | BetaGal_dom4_5: Beta-galactosidase jelly roll doma | 98.54 | |
| PF13364 | 111 | BetaGal_dom4_5: Beta-galactosidase jelly roll doma | 97.77 | |
| PF02837 | 167 | Glyco_hydro_2_N: Glycosyl hydrolases family 2, sug | 97.71 | |
| smart00633 | 254 | Glyco_10 Glycosyl hydrolase family 10. | 96.59 | |
| PRK10150 | 604 | beta-D-glucuronidase; Provisional | 95.2 | |
| PRK09525 | 1027 | lacZ beta-D-galactosidase; Reviewed | 94.4 | |
| PRK10340 | 1021 | ebgA cryptic beta-D-galactosidase subunit alpha; R | 94.24 | |
| PF02836 | 298 | Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM | 93.42 | |
| PRK10150 | 604 | beta-D-glucuronidase; Provisional | 93.11 | |
| PF00150 | 281 | Cellulase: Cellulase (glycosyl hydrolase family 5) | 93.06 | |
| PLN02161 | 531 | beta-amylase | 92.18 | |
| PF02837 | 167 | Glyco_hydro_2_N: Glycosyl hydrolases family 2, sug | 91.79 | |
| PLN02705 | 681 | beta-amylase | 91.44 | |
| PLN00197 | 573 | beta-amylase; Provisional | 91.12 | |
| PLN02803 | 548 | beta-amylase | 90.86 | |
| smart00812 | 384 | Alpha_L_fucos Alpha-L-fucosidase. O-Glycosyl hydro | 90.65 | |
| PLN02905 | 702 | beta-amylase | 90.42 | |
| COG3693 | 345 | XynA Beta-1,4-xylanase [Carbohydrate transport and | 89.66 | |
| PLN02801 | 517 | beta-amylase | 86.57 | |
| PF00331 | 320 | Glyco_hydro_10: Glycosyl hydrolase family 10; Inte | 86.4 |
| >PLN03059 beta-galactosidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-160 Score=1353.27 Aligned_cols=601 Identities=46% Similarity=0.906 Sum_probs=546.8
Q ss_pred CceeeccCcchHHHHHHHHHHcCcEEEEecCceeccccCCCCcCcccccCCCceeecCChhhHHHHHHHHHHHHHHHHhc
Q 045354 1 GDQYDFSGNLDFIKFFKLVQEAGLYAIIRIGPYVCSEWNYGGFPVWLHNIPGIQLRTNNEIYKNEMQIFTTKIVNMCKEA 80 (615)
Q Consensus 1 ~G~~dF~G~~Dl~~Fl~la~e~GL~VilRpGPYIcaEw~~GGlP~WL~~~~~~~lRs~d~~yl~~v~~~~~~l~~~i~~~ 80 (615)
||+|||+|++||++||++|||+||||||||||||||||++||||+||+++|+|++||+||+||++|++|+++|+++|+++
T Consensus 89 ~G~~dF~G~~DL~~Fl~la~e~GLyvilRpGPYIcAEw~~GGlP~WL~~~~~i~~Rs~d~~fl~~v~~~~~~l~~~l~~~ 168 (840)
T PLN03059 89 PGNYYFEDRYDLVKFIKVVQAAGLYVHLRIGPYICAEWNFGGFPVWLKYVPGIEFRTDNGPFKAAMQKFTEKIVDMMKSE 168 (840)
T ss_pred CCeeeccchHHHHHHHHHHHHcCCEEEecCCcceeeeecCCCCchhhhcCCCcccccCCHHHHHHHHHHHHHHHHHHhhc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred CccccCCCceEEEeeccccccccCCCccccHHHHHHHHHHHHhCCCccceEEecCCCCCccccccCCCcccCCCCCCCCC
Q 045354 81 NLFAPQGGPIILAQIENEYGNIMGPYKEAGKSYINWCAQMATSQNIGVPWIMCQQSDAPQPMINTCNGFYCDEFVPNNPK 160 (615)
Q Consensus 81 ~l~~~~GGpII~vQiENEyg~~~~~~g~~~~~Ym~~L~~~~~~~gi~vP~~~~~~~~~~~~~~~t~ng~~~~~~~~~~p~ 160 (615)
+||+++||||||+|||||||++.+.++.+|++||+||+++|+++|++|||+||++.++++++++||||.+|+.|.+..+.
T Consensus 169 ~l~~~~GGPIImvQIENEYGs~~~~~~~~d~~Yl~~l~~~~~~~Gi~VPl~t~dg~~~~~~v~~t~Ng~~~~~f~~~~~~ 248 (840)
T PLN03059 169 KLFEPQGGPIILSQIENEYGPVEWEIGAPGKAYTKWAADMAVKLGTGVPWVMCKQEDAPDPVIDTCNGFYCENFKPNKDY 248 (840)
T ss_pred ceeecCCCcEEEEEecccccceecccCcchHHHHHHHHHHHHHcCCCcceEECCCCCCCccceecCCCchhhhcccCCCC
Confidence 99999999999999999999987777778999999999999999999999999998888899999999999888877777
Q ss_pred CCceeeecccccccccCCCCCCCChHHHHHHHHHHHHcCCceeeeeeeecCCCCCCCCCCCCccccCCCCCCCCCCCCCC
Q 045354 161 SPKMWTENWTGWFKKWGDKDPHRTPQDVSFAVARFFQAGGVLQNYYMYHGGTNFGRDAGGPFIITSYDYDAPLDEYGNLN 240 (615)
Q Consensus 161 ~P~~~~E~~~Gwf~~wG~~~~~~~~~~~~~~~~~~l~~g~s~~n~YM~hGGTNfG~~~G~~~~~tSYDy~Api~E~G~~~ 240 (615)
+|+|+||||+|||++||++++.|+++|++.+++++|++|+|++||||||||||||||+|+++++|||||||||+|+|+++
T Consensus 249 ~P~m~tE~w~GWf~~wG~~~~~r~~~d~a~~~~~~l~~g~S~~N~YMfhGGTNFG~~~Ga~~~~TSYDYdAPL~E~G~~t 328 (840)
T PLN03059 249 KPKMWTEAWTGWYTEFGGAVPNRPAEDLAFSVARFIQNGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLPR 328 (840)
T ss_pred CCcEEeccCchhHhhcCCCCCcCCHHHHHHHHHHHHHcCCeeEEeeeccCcCCcccccCCCccccccccCCccccccCcc
Confidence 99999999999999999999999999999999999999999889999999999999999999999999999999999985
Q ss_pred ChhHHHHHHHHHHHhhhcccccCCCcccccCCCCceeeeeccCCCCCcee--eeecCCCCCcceEEeCCCceeeecCcce
Q 045354 241 QPKWGHLKQLHEAIKLGEKLLTSGNVTTKQFGNGVNLTTYSNTTSGERFC--FLSNTNTSQDANVDLQQDGKYFVPAWSV 318 (615)
Q Consensus 241 ~~ky~~lr~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~g~~--fl~n~~~~~~~~v~~~~~~~~~lp~~~v 318 (615)
+|||.+||++|.+++.+++.|+..+|....+++.+++.+|..+ + .| |+.|++.+...+|+|+++ +|.||+|||
T Consensus 329 ~pKy~~lr~l~~~~~~~~~~l~~~~p~~~~lg~~~ea~~y~~~---~-~caaFl~n~~~~~~~~v~f~g~-~y~lp~~Sv 403 (840)
T PLN03059 329 EPKWGHLRDLHKAIKLCEPALVSVDPTVTSLGSNQEAHVFKSK---S-ACAAFLANYDTKYSVKVTFGNG-QYDLPPWSV 403 (840)
T ss_pred hhHHHHHHHHHHHHHhcCccccCCCCceeccCCceeEEEccCc---c-chhhheeccCCCCceeEEECCc-ccccCccce
Confidence 5799999999999999988888888877788999999999853 3 47 999999888899999999 999999999
Q ss_pred eecccCCccccccceecceeeeeeccccccccccchhhhhcccc-cccCCCccccccchhhhccCCCCCcceEEEEEeec
Q 045354 319 SILHGCNKEVYNTAKVNTETTVMVKKPIELGTKLSWMWAQETIR-DTLHGKGRFNATKLIEQKEATSDESDYLWYMTSIE 397 (615)
Q Consensus 319 ~il~~~~~~~~~t~~v~~~~~~~~~~~~~~~~~~~w~~~~e~~~-~~~~~~~~~~~p~~mEql~~t~~~~GyvlY~T~i~ 397 (615)
+|||+|+.++|+|+++..|+..++..+. ...+.|+++.| + .+..++.+.+...++||+++|+|.+||+||+|+|.
T Consensus 404 silpd~~~~lfnta~v~~q~~~~~~~~~--~~~~~w~~~~e--~~~~~~~~~~~~~e~l~e~~n~t~d~~dYlwY~t~i~ 479 (840)
T PLN03059 404 SILPDCKTAVFNTARLGAQSSQMKMNPV--GSTFSWQSYNE--ETASAYTDDTTTMDGLWEQINVTRDATDYLWYMTEVH 479 (840)
T ss_pred eecccccceeeeccccccccceeecccc--cccccceeecc--cccccccCCCcchhhHHHhhcccCCCCceEEEEEEEe
Confidence 9999999999999999988776644332 24679999999 5 33334456777888999999999999999999997
Q ss_pred cCCCCC------CCeeeEeCCcceEEEEEECCEEEEEEEcce----eeeeeeeeeCCCccEEEEEEeccCcccccCCcCC
Q 045354 398 NMGKSS------HNATLYVKSSGQVLHAYVNSKHIGSQFGYD----FEFKQPAILRPGKNFLTLLSATVGLQNYGEFFDL 467 (615)
Q Consensus 398 ~~~~~~------~~~~L~v~~~~D~a~Vfvng~~~G~~~~~~----~~~~~~i~l~~g~~~L~ILvEnmGRvNyG~~~~~ 467 (615)
. ...+ ...+|+|.+++|++||||||+++|++++.. +.++.+++++.+.|+|+||||||||+|||++|++
T Consensus 480 ~-~~~~~~~~~~~~~~L~v~~~~d~~~vFVNg~~~Gt~~~~~~~~~~~~~~~v~l~~g~n~L~iLse~vG~~NyG~~le~ 558 (840)
T PLN03059 480 I-DPDEGFLKTGQYPVLTIFSAGHALHVFINGQLAGTVYGELSNPKLTFSQNVKLTVGINKISLLSVAVGLPNVGLHFET 558 (840)
T ss_pred e-cCCccccccCCCceEEEcccCcEEEEEECCEEEEEEEeecCCcceEEecccccCCCceEEEEEEEeCCCCccCccccc
Confidence 6 3221 335699999999999999999999998765 4555556688899999999999999999999999
Q ss_pred CCcCCCCCCEEEcccCCcccccCCCccEEeccCccccccccCCCCCCCCcccCCCCCCCCCCceEEEEEEEcCCCCCceE
Q 045354 468 GPEGLAGGPVELNVDGMASLNLSSNIWNYKVGLNGEAKRLYDPNSPHPQIWKSSKKLPIGKPMKWYRTSFKIPPGTSPVV 547 (615)
Q Consensus 468 ~~KGI~g~~V~L~~~~~~~~~L~~~~W~y~l~l~~e~~~~~~~~~~~~~~w~~~~~~~~~~~p~fyr~tF~ip~~~d~tf 547 (615)
++|||+| +|+|++.+.++.+|++|.|.|+++|+||.+++++.++..++.|.+.+..+..+||+|||++|++|++.||||
T Consensus 559 ~~kGI~g-~V~i~g~~~g~~dls~~~W~y~lgL~GE~~~i~~~~~~~~~~W~~~~~~~~~~p~twYK~~Fd~p~g~Dpv~ 637 (840)
T PLN03059 559 WNAGVLG-PVTLKGLNEGTRDLSGWKWSYKIGLKGEALSLHTITGSSSVEWVEGSLLAQKQPLTWYKTTFDAPGGNDPLA 637 (840)
T ss_pred ccccccc-cEEEecccCCceecccCccccccCccceeccccccCCCCCccccccccccCCCCceEEEEEEeCCCCCCCEE
Confidence 9999999 899999777778899999999999999999998876556788976643344567999999999999999999
Q ss_pred EEeCCCceEEEEEcCccccccccccccCCCCCCCCCCCCCCCCCccccCCCCCccceeeecCccccc
Q 045354 548 VDLQGMGKGHAWVNGNSLGRYWPSQIADTNGCSDTCDYRGEYKPEKCVTNCGNPSQRWYNFNHFLQQ 614 (615)
Q Consensus 548 Ld~~gwgKG~vwVNG~nLGRYW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sq~~yhvp~~~l~ 614 (615)
|||++||||+|||||+||||||+.. ++..|| +.|||+|.|++.||+||||+||||+|||||+||+
T Consensus 638 LDm~gmGKG~aWVNG~nIGRYW~~~-a~~~gC-~~c~y~g~~~~~kc~~~cggP~q~lYHVPr~~Lk 702 (840)
T PLN03059 638 LDMSSMGKGQIWINGQSIGRHWPAY-TAHGSC-NGCNYAGTFDDKKCRTNCGEPSQRWYHVPRSWLK 702 (840)
T ss_pred EecccCCCeeEEECCcccccccccc-cccCCC-ccccccccccchhhhccCCCceeEEEeCcHHHhc
Confidence 9999999999999999999999984 667899 7899999999999999999999999999999997
|
|
| >KOG0496 consensus Beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >COG1874 LacA Beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF13364 BetaGal_dom4_5: Beta-galactosidase jelly roll domain; PDB: 1TG7_A 1XC6_A 3OGS_A 3OGV_A 3OGR_A 3OG2_A | Back alignment and domain information |
|---|
| >PF13364 BetaGal_dom4_5: Beta-galactosidase jelly roll domain; PDB: 1TG7_A 1XC6_A 3OGS_A 3OGV_A 3OGR_A 3OG2_A | Back alignment and domain information |
|---|
| >PF02837 Glyco_hydro_2_N: Glycosyl hydrolases family 2, sugar binding domain; InterPro: IPR006104 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >smart00633 Glyco_10 Glycosyl hydrolase family 10 | Back alignment and domain information |
|---|
| >PRK10150 beta-D-glucuronidase; Provisional | Back alignment and domain information |
|---|
| >PRK09525 lacZ beta-D-galactosidase; Reviewed | Back alignment and domain information |
|---|
| >PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed | Back alignment and domain information |
|---|
| >PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PRK10150 beta-D-glucuronidase; Provisional | Back alignment and domain information |
|---|
| >PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PLN02161 beta-amylase | Back alignment and domain information |
|---|
| >PF02837 Glyco_hydro_2_N: Glycosyl hydrolases family 2, sugar binding domain; InterPro: IPR006104 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PLN02705 beta-amylase | Back alignment and domain information |
|---|
| >PLN00197 beta-amylase; Provisional | Back alignment and domain information |
|---|
| >PLN02803 beta-amylase | Back alignment and domain information |
|---|
| >smart00812 Alpha_L_fucos Alpha-L-fucosidase | Back alignment and domain information |
|---|
| >PLN02905 beta-amylase | Back alignment and domain information |
|---|
| >COG3693 XynA Beta-1,4-xylanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PLN02801 beta-amylase | Back alignment and domain information |
|---|
| >PF00331 Glyco_hydro_10: Glycosyl hydrolase family 10; InterPro: IPR001000 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 615 | ||||
| 3d3a_A | 612 | Crystal Structure Of A Beta-Galactosidase From Bact | 8e-30 | ||
| 4e8c_A | 595 | Crystal Structure Of Streptococcal Beta-Galactosida | 1e-27 | ||
| 3thc_A | 654 | Crystal Structure Of Human Beta-Galactosidase In Co | 2e-26 | ||
| 1tg7_A | 971 | Native Structure Of Beta-Galactosidase From Penicil | 2e-23 | ||
| 3og2_A | 1003 | Native Crystal Structure Of Trichoderma Reesei Beta | 1e-16 |
| >pdb|3D3A|A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron Length = 612 | Back alignment and structure |
|
| >pdb|4E8C|A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In Complex With Galactose Length = 595 | Back alignment and structure |
| >pdb|3THC|A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose Length = 654 | Back alignment and structure |
| >pdb|1TG7|A Chain A, Native Structure Of Beta-Galactosidase From Penicillium Sp. Length = 971 | Back alignment and structure |
| >pdb|3OG2|A Chain A, Native Crystal Structure Of Trichoderma Reesei Beta-Galactosidase Length = 1003 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* Length = 1003 | Back alignment and structure |
|---|
Score = 348 bits (893), Expect = e-108
Identities = 133/720 (18%), Positives = 225/720 (31%), Gaps = 115/720 (15%)
Query: 2 DQYDFSGNLDFIKFFKLVQEAGLYAIIRIGPYVCSEWNYGGFPVWLHNIPGIQLRTNNEI 61
++ G FF+ +AG+Y + R GPY+ +E + GGFP WL + G +LRT+
Sbjct: 87 GRFRADGIFSLEPFFEAATKAGIYLLARPGPYINAEVSGGGFPGWLQRVKG-KLRTDAPD 145
Query: 62 YKNEMQIFTTKIVNMCKEANLFAPQGGPIILAQIENEYGNIMGPYKEAGKSYINWCAQMA 121
Y + + I ++ + GGP+IL Q ENEY K Y+ + A
Sbjct: 146 YLHATDNYVAHIASIIAK--AQITNGGPVILYQPENEYSGAAEGVLFPNKPYMQYVIDQA 203
Query: 122 TSQNIGVPWIMC----QQSDAPQPMINTCNGFYCDEFVPN-------------------- 157
+ I VP I + AP + + + + D +
Sbjct: 204 RNAGIIVPLINNDAFPGGTGAPGTGLGSVDIYGHDGYPLGFDCAHPSAWPDNGLPTTWRQ 263
Query: 158 -----NPKSPKMWTENWTGWFKKWGDKDPHRTPQDVSFAVARFFQ-----AGGVLQNYYM 207
+P +P E G F +G + V+ R F AG + N YM
Sbjct: 264 DHLNISPSTPFSLVEFQGGAFDPFGGWGFEQCSALVNHEFERVFYKNNMAAGVTIFNIYM 323
Query: 208 YHGGTNFGRDAGGPFIITSYDYDAPLDEYGNLNQPKWGHLKQLHEAIKLGEKLLTS--GN 265
GGTN+G G P TSYDY A + E +++ K+ LK + +K+ +T+ N
Sbjct: 324 TFGGTNWGNL-GHPGGYTSYDYGASIREDRRIDREKYSELKLQGQFLKVSPGYITATPEN 382
Query: 266 VTTKQFGNGVNLTTYS--NTTSGERFCFLSNTNTSQDANVDLQ-----QDGKYFVPAWSV 318
T + + N+ SG F + + N S G +P
Sbjct: 383 ATQGVYSDSQNIVITPLLAKESG-DFFVVRHANYSSTDTASYTVKLPTSAGDLTIPQLGG 441
Query: 319 SILHGCNKEVYNTAKVNTETTVMVKKPIELGTKLS---------WMWAQETIRDTLHGKG 369
S+ + ++ E+ T + AQE +
Sbjct: 442 SLTLTGRDSKIHVTDYPVGKFTLLYSTAEIFTWNEFAEKTVLVLYGGAQELHEFAVKNPF 501
Query: 370 RFNAT---KLIEQKEATSDESDYLWYMTSIENMG----KSSHNATLYVKSSGQVLHAYV- 421
+ T K IE T + L + + +Y+ + +V
Sbjct: 502 GSSKTAKAKKIEGSNVTIHTTSNLTVVLQWTASSARQVVQLGSLVIYMVDRNSAYNYWVP 561
Query: 422 --NSKHIGSQFGYDFEFKQPAILRPG---------KNFLTL---LSATVGLQNYGEFFDL 467
S +G I+ G N L++ + T L+ G +
Sbjct: 562 TLPGSGKQSAYGSSLMNPDSVIINGGYLIRSVAIKGNALSVQADFNVTTPLEIIGIPKGI 621
Query: 468 GPEGLAGGPVELNVDGMASL--------------NLSSNIWNYKVGLNGEAKRLYD---- 509
+ G + +V + L+ W L E + YD
Sbjct: 622 SKLAVNGKELGYSVSELGDWIAHPAIEIPHVQVPELTKLKWYKVDSLP-EIRSNYDDSRW 680
Query: 510 PNSPHPQIWKSSKKLPIGKPM-----------KWYRTSFKIPPGTSPVVVDLQG--MGKG 556
P + + L + +R F + + QG
Sbjct: 681 PLANLRTSNNTYAPLKTPVSLYGSDYGFHAGTLLFRGRFTARTARQQLFLSTQGGSAFAS 740
Query: 557 HAWVNGNSLGRYWPSQIADTNGCSDT---CDYRGEYKPEKCVTNCGNPSQRWYNFNHFLQ 613
W+N +G + A S T Y V + G + W + ++
Sbjct: 741 SVWLNDRFIGSFTGFDAASAANSSYTLDRLVRGRRYILTVVVDSTGLD-ENWTTGDDSMK 799
|
| >1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* Length = 971 | Back alignment and structure |
|---|
| >1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* Length = 971 | Back alignment and structure |
|---|
| >3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} Length = 612 | Back alignment and structure |
|---|
| >3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} Length = 612 | Back alignment and structure |
|---|
| >3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* Length = 654 | Back alignment and structure |
|---|
| >4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A Length = 595 | Back alignment and structure |
|---|
| >3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus} Length = 552 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 615 | |||
| 4e8d_A | 595 | Glycosyl hydrolase, family 35; TIM barrel, beta-pr | 100.0 | |
| 3thd_A | 654 | Beta-galactosidase; TIM-barrel domain, glycosyl hy | 100.0 | |
| 3d3a_A | 612 | Beta-galactosidase; protein structure initiative I | 100.0 | |
| 1tg7_A | 971 | Beta-galactosidase; TIM barrel domain, glycoside h | 100.0 | |
| 3og2_A | 1003 | Beta-galactosidase; TIM barrel domain, glycoside h | 100.0 | |
| 3u7v_A | 552 | Beta-galactosidase; structural genomics, PSI-biolo | 99.84 | |
| 1vem_A | 516 | Beta-amylase; beta-alpha-barrels, optimum PH, hydr | 99.51 | |
| 1kwg_A | 645 | Beta-galactosidase; TIM barrel, glycoside hydrolas | 99.48 | |
| 3tty_A | 675 | Beta-GAL, beta-galactosidase; TIM barrel, glycosid | 99.45 | |
| 3pzg_A | 383 | Mannan endo-1,4-beta-mannosidase. glycosyl hydrol | 98.71 | |
| 2osx_A | 481 | Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel | 98.36 | |
| 1yq2_A | 1024 | Beta-galactosidase; glycosyl hydrolase family 2, T | 98.31 | |
| 1rh9_A | 373 | Endo-beta-mannanase; endo-beta-mannase, retaining, | 98.02 | |
| 1uuq_A | 440 | Mannosyl-oligosaccharide glucosidase; hydrolase, m | 97.64 | |
| 3cmg_A | 667 | Putative beta-galactosidase; structural genomics, | 97.6 | |
| 1i1w_A | 303 | Endo-1,4-beta-xylanase; xylan degradation, hydrola | 97.56 | |
| 3hn3_A | 613 | Beta-G1, beta-glucuronidase; lysosomal enzyme, aci | 97.46 | |
| 1xyz_A | 347 | 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola | 97.45 | |
| 1n82_A | 331 | Xylanase, intra-cellular xylanase; hydrolase; 1.45 | 97.35 | |
| 1nq6_A | 302 | XYS1; glycoside hydrolase family 10, xylanase, xyl | 97.32 | |
| 1qnr_A | 344 | Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt | 97.3 | |
| 3cui_A | 315 | EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine | 97.3 | |
| 3fn9_A | 692 | Putative beta-galactosidase; structural genomics, | 97.29 | |
| 4hty_A | 359 | Cellulase; (alpha/beta)8 barrel, family 5 endogluc | 97.27 | |
| 1ta3_B | 303 | Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), | 97.25 | |
| 1ur1_A | 378 | Endoxylanase; hydrolase, family 10, glycoside hydr | 97.19 | |
| 3lpf_A | 605 | Beta-glucuronidase; alpha/beta barrel, sugar-bindi | 97.13 | |
| 1v0l_A | 313 | Endo-1,4-beta-xylanase A; glycoside hydrolase fami | 97.13 | |
| 2uwf_A | 356 | Endoxylanase, alkaline active endoxylanase; hydrol | 97.1 | |
| 2dep_A | 356 | Xylanase B, thermostable celloxylanase; glycosidas | 97.06 | |
| 3gm8_A | 801 | Glycoside hydrolase family 2, candidate beta-GLYC; | 97.05 | |
| 1us2_A | 530 | Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca | 96.96 | |
| 2d1z_A | 436 | Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en | 96.79 | |
| 1r85_A | 379 | Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A | 96.76 | |
| 1w32_A | 348 | Endo-1,4-beta-xylanase A precursor; mutant, calciu | 96.59 | |
| 3hn3_A | 613 | Beta-G1, beta-glucuronidase; lysosomal enzyme, aci | 96.49 | |
| 3fn9_A | 692 | Putative beta-galactosidase; structural genomics, | 96.29 | |
| 3cmg_A | 667 | Putative beta-galactosidase; structural genomics, | 96.11 | |
| 3lpf_A | 605 | Beta-glucuronidase; alpha/beta barrel, sugar-bindi | 96.0 | |
| 1bqc_A | 302 | Protein (beta-mannanase); glycosyl hydrolase, fami | 95.93 | |
| 3gm8_A | 801 | Glycoside hydrolase family 2, candidate beta-GLYC; | 95.9 | |
| 1hjs_A | 332 | Beta-1,4-galactanase; 4-galactanases, family 53 gl | 95.78 | |
| 1ur4_A | 399 | Galactanase; hydrolase, beta-1, glycoside hydrolas | 95.62 | |
| 1ece_A | 358 | Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. | 95.56 | |
| 2wnw_A | 447 | Activated by transcription factor SSRB; hydrolase, | 95.55 | |
| 3pzt_A | 327 | Endoglucanase; alpha/beta barrel, glycosyl hydrola | 95.49 | |
| 3bga_A | 1010 | Beta-galactosidase; NYSGXRC, protein structure ini | 95.05 | |
| 1ceo_A | 343 | Cellulase CELC; glycosyl hydrolase, family A/5 of | 95.05 | |
| 3gyc_A | 393 | Putative glycoside hydrolase; YP_001304622.1, stru | 94.88 | |
| 2vzs_A | 1032 | CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, | 94.87 | |
| 2c0h_A | 353 | Mannan endo-1,4-beta-mannosidase; hydrolase, signa | 94.83 | |
| 3n9k_A | 399 | Glucan 1,3-beta-glucosidase; aromatic entranceway/ | 94.77 | |
| 3niy_A | 341 | Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.5 | 94.57 | |
| 3emz_A | 331 | Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 ba | 94.56 | |
| 1jz7_A | 1023 | Lactase, beta-galactosidase, LACZ; TIM barrel (alp | 94.52 | |
| 1yq2_A | 1024 | Beta-galactosidase; glycosyl hydrolase family 2, T | 94.46 | |
| 1h4p_A | 408 | Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca | 94.29 | |
| 7a3h_A | 303 | Endoglucanase; hydrolase, cellulose degradation, g | 94.23 | |
| 3jug_A | 345 | Beta-mannanase; TIM-barrel, glycosidase, hydrolase | 94.21 | |
| 1vjz_A | 341 | Endoglucanase; TM1752, structural genomics, JCSG, | 94.13 | |
| 1egz_A | 291 | Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL | 94.11 | |
| 4f8x_A | 335 | Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET | 94.03 | |
| 2je8_A | 848 | Beta-mannosidase; glycoside hydrolase, hydrolase; | 93.99 | |
| 3oba_A | 1032 | Beta-galactosidase; TIM barrel, tetramer, GH2, gly | 93.82 | |
| 2w61_A | 555 | GAS2P, glycolipid-anchored surface protein 2; glyc | 93.8 | |
| 3u7b_A | 327 | Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET | 93.77 | |
| 2nt0_A | 497 | Glucosylceramidase; cerezyme, glucocerebrosidase, | 93.76 | |
| 1jz7_A | 1023 | Lactase, beta-galactosidase, LACZ; TIM barrel (alp | 93.48 | |
| 2y24_A | 383 | Xylanase; hydrolase, GH5 family, aldotetraouronic | 93.37 | |
| 3nco_A | 320 | Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 | 93.37 | |
| 2jep_A | 395 | Xyloglucanase; family 5, plant cell WALL, hydrolas | 93.31 | |
| 1tvn_A | 293 | Cellulase, endoglucanase G; glycoside hydrolase, C | 93.21 | |
| 1edg_A | 380 | Endoglucanase A; family A, cellulases, xylanases, | 92.62 | |
| 2whl_A | 294 | Beta-mannanase, baman5; glycoside hydrolase, hydro | 92.61 | |
| 4awe_A | 387 | Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana | 92.44 | |
| 3vup_A | 351 | Beta-1,4-mannanase; TIM barrel, digestive fluid, H | 92.31 | |
| 3civ_A | 343 | Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. | 92.19 | |
| 1fa2_A | 498 | Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.3 | 91.42 | |
| 3ndz_A | 345 | Endoglucanase D; cellotriose, xylanase, carbohydra | 91.35 | |
| 2je8_A | 848 | Beta-mannosidase; glycoside hydrolase, hydrolase; | 91.12 | |
| 2y8k_A | 491 | Arabinoxylanase, carbohydrate binding family 6; hy | 91.11 | |
| 3aof_A | 317 | Endoglucanase; glycosyl hydrolase family 5, cellul | 90.94 | |
| 3bga_A | 1010 | Beta-galactosidase; NYSGXRC, protein structure ini | 90.26 | |
| 3qho_A | 458 | Endoglucanase, 458AA long hypothetical endo-1,4-be | 90.01 | |
| 3icg_A | 515 | Endoglucanase D; cellulase, xylanase, carbohydrate | 89.96 | |
| 1fob_A | 334 | Beta-1,4-galactanase; B/A barrel, glycosyl hydrola | 89.89 | |
| 2cks_A | 306 | Endoglucanase E-5; carbohydrate metabolism, polysa | 89.79 | |
| 1tg7_A | 971 | Beta-galactosidase; TIM barrel domain, glycoside h | 89.19 | |
| 1wdp_A | 495 | Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.2 | 89.06 | |
| 3ayr_A | 376 | Endoglucanase; TIM barrel, hydrolase, carbohydrate | 88.76 | |
| 2xfr_A | 535 | Beta-amylase; hydrolase, carbohydrate metabolism, | 88.68 | |
| 1h1n_A | 305 | Endo type cellulase ENGI; hydrolase, glycosyl hydr | 88.37 | |
| 3l55_A | 353 | B-1,4-endoglucanase/cellulase; putative beta-1,4-e | 87.68 | |
| 3ro8_A | 341 | Endo-1,4-beta-xylanase; glycosyl hydrolase family | 86.95 | |
| 3qr3_A | 340 | Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A | 86.34 | |
| 4ekj_A | 500 | Beta-xylosidase; TIM-barrel fold, hemicellulase, h | 85.03 | |
| 2w5f_A | 540 | Endo-1,4-beta-xylanase Y; cellulosome, glycosidase | 84.6 | |
| 3oba_A | 1032 | Beta-galactosidase; TIM barrel, tetramer, GH2, gly | 84.41 | |
| 1vff_A | 423 | Beta-glucosidase; glycosyl hydrolase, membrane-bou | 84.12 | |
| 1wky_A | 464 | Endo-beta-1,4-mannanase; TIM barrel, catalytic dom | 83.8 | |
| 1g01_A | 364 | Endoglucanase; alpha/beta barrel, TIM barrel, hydr | 81.05 |
| >4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-119 Score=1002.79 Aligned_cols=467 Identities=26% Similarity=0.470 Sum_probs=382.4
Q ss_pred CceeeccCcchHHHHHHHHHHcCcEEEEecCceeccccCCCCcCcccccCCCceeecCChhhHHHHHHHHHHHHHHHHhc
Q 045354 1 GDQYDFSGNLDFIKFFKLVQEAGLYAIIRIGPYVCSEWNYGGFPVWLHNIPGIQLRTNNEIYKNEMQIFTTKIVNMCKEA 80 (615)
Q Consensus 1 ~G~~dF~G~~Dl~~Fl~la~e~GL~VilRpGPYIcaEw~~GGlP~WL~~~~~~~lRs~d~~yl~~v~~~~~~l~~~i~~~ 80 (615)
||+|||+|++||++||++|+|+||+|||||||||||||++||+|+||+++| +++|++||+|+++|++|+++|+++|+
T Consensus 62 ~G~fdF~g~~dL~~fl~~a~~~Gl~VilrpGPYi~aEw~~GG~P~WL~~~p-~~lRt~~p~y~~~~~~~~~~l~~~l~-- 138 (595)
T 4e8d_A 62 EGEFHFEGDLDLEKFLQIAQDLGLYAIVRPSPFICAEWEFGGLPAWLLTKN-MRIRSSDPAYIEAVGRYYDQLLPRLV-- 138 (595)
T ss_dssp TTBCCCSGGGCHHHHHHHHHHTTCEEEEECCSCCCTTBGGGGCCGGGGGSS-SCSSSSCHHHHHHHHHHHHHHGGGTG--
T ss_pred CCeecccchhhHHHHHHHHHHcCCEEEEecCCceecccCCCcCChhhccCC-ceeccCCHHHHHHHHHHHHHHHHHHH--
Confidence 799999999999999999999999999999999999999999999999998 89999999999999999999999999
Q ss_pred CccccCCCceEEEeeccccccccCCCccccHHHHHHHHHHHHhCCCccceEEecCCC-------CC--ccccccCC-Ccc
Q 045354 81 NLFAPQGGPIILAQIENEYGNIMGPYKEAGKSYINWCAQMATSQNIGVPWIMCQQSD-------AP--QPMINTCN-GFY 150 (615)
Q Consensus 81 ~l~~~~GGpII~vQiENEyg~~~~~~g~~~~~Ym~~L~~~~~~~gi~vP~~~~~~~~-------~~--~~~~~t~n-g~~ 150 (615)
++++++||||||+|||||||++ + ++++||+||+++++++||+|||+|||+.+ +. +++++||| |..
T Consensus 139 ~~~~~~GgpVI~~QvENEyG~~----~-~~~~Y~~~l~~~~~~~Gi~vpl~t~d~~~~~~~~~G~~~~~~~~~t~nfg~~ 213 (595)
T 4e8d_A 139 PRLLDNGGNILMMQVENEYGSY----G-EDKAYLRAIRQLMEECGVTCPLFTSDGPWRATLKAGTLIEEDLFVTGNFGSK 213 (595)
T ss_dssp GGBGGGTSCEEEEESSSSGGGT----C-CCHHHHHHHHHHHHHTTCCSCEEEEECSSHHHHHHHCCGGGTCEEEEEESSC
T ss_pred HHhcccCCCEEEEEcccccccc----C-CcHHHHHHHHHHHHHcCCcEEEEEccCcchhcccCCccCCCCeEEEeeCCCc
Confidence 8999999999999999999985 4 79999999999999999999999999753 22 66888998 666
Q ss_pred c-CCCC------CCCCCC-CceeeecccccccccCCCCCCCChHHHHHHHHHHHHcCCceeeeeeeecCCCCCCCCCCCC
Q 045354 151 C-DEFV------PNNPKS-PKMWTENWTGWFKKWGDKDPHRTPQDVSFAVARFFQAGGVLQNYYMYHGGTNFGRDAGGPF 222 (615)
Q Consensus 151 ~-~~~~------~~~p~~-P~~~~E~~~Gwf~~wG~~~~~~~~~~~~~~~~~~l~~g~s~~n~YM~hGGTNfG~~~G~~~ 222 (615)
| +.|. +..|++ |+|++|||+||||+||++++.+++++++..++++|++| + +||||||||||||+|+|+++
T Consensus 214 ~~~~~~~~~~~~~~~p~~~P~~~~Ef~~Gwfd~WG~~~~~~~~~~~~~~~~~~l~~g-s-~N~YM~hGGTNfG~~~Ga~~ 291 (595)
T 4e8d_A 214 APYNFSQMQEFFDEHGKKWPLMCMEFWDGWFNRWKEPIITRDPKELADAVREVLEQG-S-INLYMFHGGTNFGFMNGCSA 291 (595)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCEEEEEECSCCCBTTSCCCCCCHHHHHHHHHHHHHHS-E-EEEEEEECCBCCTTCBCEEE
T ss_pred hhHhHHHHHHhhhcCCCCCCeEEEeeccccccccCCCCCCCCHHHHHHHHHHHHHcC-C-ceEEecccccCcccccCCCC
Confidence 6 3332 344888 99999999999999999999999999999999999999 5 89999999999999998752
Q ss_pred -------ccccCCCCCCCCCCCCCCChhHHHHHHHHHHHhhhcccccCCCcccccCCCCceeeeeccCCCCCceeeeecC
Q 045354 223 -------IITSYDYDAPLDEYGNLNQPKWGHLKQLHEAIKLGEKLLTSGNVTTKQFGNGVNLTTYSNTTSGERFCFLSNT 295 (615)
Q Consensus 223 -------~~tSYDy~Api~E~G~~~~~ky~~lr~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~g~~fl~n~ 295 (615)
++|||||||||+|+|++ ||||.++|+++.... .+ + |.+ + +...++..|
T Consensus 292 ~~~~~~p~~TSYDYdApi~E~G~~-t~Ky~~lr~~i~~~~--~~-~----p~~-~-P~~~~~~~~--------------- 346 (595)
T 4e8d_A 292 RGTLDLPQVTSYDYDALLDEEGNP-TAKYLAVKKMMATHF--SE-Y----PQL-E-PLYKESMEL--------------- 346 (595)
T ss_dssp ETTEEEEBCSBCCTTCSBCTTSCB-CHHHHHHHHHHHHHC--TT-S----CCC-C-CCCCCBCCE---------------
T ss_pred CCCCCCCCCCccCCCCccCcCCCc-cHHHHHHHHHHHHhC--CC-C----CCC-C-CCCCccccc---------------
Confidence 47999999999999998 899999999886431 11 1 000 0 001111111
Q ss_pred CCCCcceEEeCCCceeeecCcceeecccCCccccccceecceeeeeeccccccccccchhhh---hcccccccCCCcccc
Q 045354 296 NTSQDANVDLQQDGKYFVPAWSVSILHGCNKEVYNTAKVNTETTVMVKKPIELGTKLSWMWA---QETIRDTLHGKGRFN 372 (615)
Q Consensus 296 ~~~~~~~v~~~~~~~~~lp~~~v~il~~~~~~~~~t~~v~~~~~~~~~~~~~~~~~~~w~~~---~e~~~~~~~~~~~~~ 372 (615)
++|.+. . ....|+.+ .+ + +.+ .
T Consensus 347 -----~~v~l~----~--------------------------------------~~~L~~~l~~l~~--~--~~s----~ 371 (595)
T 4e8d_A 347 -----DAIPLV----E--------------------------------------KVSLFETLDSLSS--P--VES----L 371 (595)
T ss_dssp -----EEEEEE----E--------------------------------------EEEHHHHHHHHCC--C--EEE----S
T ss_pred -----ceEEec----c--------------------------------------cccHHHhhhhcCC--c--ccc----C
Confidence 112211 0 01122222 12 2 222 3
Q ss_pred ccchhhhccCCCCCcceEEEEEeeccCCCCCCCeeeEeCCcceEEEEEECCEEEEEEEcceeeeeeeeeeCCCc-cEEEE
Q 045354 373 ATKLIEQKEATSDESDYLWYMTSIENMGKSSHNATLYVKSSGQVLHAYVNSKHIGSQFGYDFEFKQPAILRPGK-NFLTL 451 (615)
Q Consensus 373 ~p~~mEql~~t~~~~GyvlY~T~i~~~~~~~~~~~L~v~~~~D~a~Vfvng~~~G~~~~~~~~~~~~i~l~~g~-~~L~I 451 (615)
.|.+||+|+| .|||+||||+|+. . .....|++.++||||+|||||+++|++++.....+++++..++. ++|+|
T Consensus 372 ~P~~mE~lgq---~~GyvlY~t~i~~-~--~~~~~L~~~~~~Dra~Vfvdg~~~g~l~r~~~~~~i~~~~~~~~~~~L~I 445 (595)
T 4e8d_A 372 YPQKMEELGQ---SYGYLLYRTETNW-D--AEEERLRIIDGRDRAQLYVDGQWVKTQYQTEIGEDIFYQGKKKGLSRLDI 445 (595)
T ss_dssp SCCBTGGGTC---CSSEEEEEEEEEC-S--SSSEEEEEEEEESEEEEEETTEEEEEEEGGGTTSCEEECCCSSSEEEEEE
T ss_pred CCCCHHHcCC---CcCeEEEEeccCC-C--CCCceeecCCCceEEEEEECCEEEEEEEcccCcceEEeecCCCCCCEEEE
Confidence 5678999998 9999999999976 2 35678999999999999999999999998754345555554455 79999
Q ss_pred EEeccCcccccCCc--CCCCcCCCCCCEEEcccCCcccccCCCccE-EeccCccccccccCCCCCCCCcccCCCCCCCCC
Q 045354 452 LSATVGLQNYGEFF--DLGPEGLAGGPVELNVDGMASLNLSSNIWN-YKVGLNGEAKRLYDPNSPHPQIWKSSKKLPIGK 528 (615)
Q Consensus 452 LvEnmGRvNyG~~~--~~~~KGI~g~~V~L~~~~~~~~~L~~~~W~-y~l~l~~e~~~~~~~~~~~~~~w~~~~~~~~~~ 528 (615)
|||||||||||+.| .+++|||+| +|+|+++ .|+ +|+ |+++|+... .+.|..... ..
T Consensus 446 LVEN~GRvNyG~~~~~~~~~KGi~g-~V~l~~~-----~l~--~W~~~~L~l~~~~----------~~~~~~~~~---~~ 504 (595)
T 4e8d_A 446 LIENMGRVNYGHKFLADTQRKGIRT-GVCKDLH-----FLL--NWKHYPLPLDNPE----------KIDFSKGWT---QG 504 (595)
T ss_dssp EEECCCCCCSGGGTTCGGGSCEEEE-EEEETTE-----ECC--CEEEEEECCCCGG----------GCCTTSCCC---TT
T ss_pred EEEcCCCcccCcccCcCCCCCCCCC-CeEECCE-----EcC--CcEEEeeccchhh----------hcccccccC---CC
Confidence 99999999999988 478999999 8999987 577 676 899887521 222322211 24
Q ss_pred CceEEEEEEEcCCCCCceEEEeCCCceEEEEEcCccccccccccccCCCCCCCCCCCCCCCCCccccCCCCCccceeeec
Q 045354 529 PMKWYRTSFKIPPGTSPVVVDLQGMGKGHAWVNGNSLGRYWPSQIADTNGCSDTCDYRGEYKPEKCVTNCGNPSQRWYNF 608 (615)
Q Consensus 529 ~p~fyr~tF~ip~~~d~tfLd~~gwgKG~vwVNG~nLGRYW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sq~~yhv 608 (615)
+|+||+++|+++++.| |||||+||+||+||||||||||||+ + .|.|+.| |
T Consensus 505 ~P~fy~g~f~~~~~~D-TfLd~~gwgKG~v~VNG~nLGRYW~-~---------------------------GPQ~tLY-v 554 (595)
T 4e8d_A 505 QPAFYAYDFTVEEPKD-TYLDLSEFGKGVAFVNGQNLGRFWN-V---------------------------GPTLSLY-I 554 (595)
T ss_dssp SCEEEEEEEEESSCCB-EEEECTTCCEEEEEETTEEEEEEET-T---------------------------CSBCEEE-E
T ss_pred CCeEEEEEEEcCCCCC-EEEeCCCCceEEEEECCeeeecccC-C---------------------------CCeEEEE-e
Confidence 5899999999977666 9999999999999999999999996 4 2889999 9
Q ss_pred Cccccc
Q 045354 609 NHFLQQ 614 (615)
Q Consensus 609 p~~~l~ 614 (615)
|..||+
T Consensus 555 P~~~Lk 560 (595)
T 4e8d_A 555 PHSYLK 560 (595)
T ss_dssp CGGGSC
T ss_pred cHHHhC
Confidence 999997
|
| >3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* | Back alignment and structure |
|---|
| >3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
| >1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* | Back alignment and structure |
|---|
| >3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* | Back alignment and structure |
|---|
| >3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus} | Back alignment and structure |
|---|
| >1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A | Back alignment and structure |
|---|
| >1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* | Back alignment and structure |
|---|
| >3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* | Back alignment and structure |
|---|
| >3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* | Back alignment and structure |
|---|
| >2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* | Back alignment and structure |
|---|
| >1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 | Back alignment and structure |
|---|
| >1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* | Back alignment and structure |
|---|
| >3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} | Back alignment and structure |
|---|
| >1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A | Back alignment and structure |
|---|
| >3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* | Back alignment and structure |
|---|
| >1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A | Back alignment and structure |
|---|
| >1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* | Back alignment and structure |
|---|
| >3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A* | Back alignment and structure |
|---|
| >3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} | Back alignment and structure |
|---|
| >4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A* | Back alignment and structure |
|---|
| >1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A* | Back alignment and structure |
|---|
| >3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A | Back alignment and structure |
|---|
| >1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A | Back alignment and structure |
|---|
| >2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A* | Back alignment and structure |
|---|
| >2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium} | Back alignment and structure |
|---|
| >3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus} | Back alignment and structure |
|---|
| >1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A | Back alignment and structure |
|---|
| >2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A | Back alignment and structure |
|---|
| >1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A | Back alignment and structure |
|---|
| >1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A | Back alignment and structure |
|---|
| >3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* | Back alignment and structure |
|---|
| >3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} | Back alignment and structure |
|---|
| >3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} | Back alignment and structure |
|---|
| >3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A | Back alignment and structure |
|---|
| >1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* | Back alignment and structure |
|---|
| >3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus} | Back alignment and structure |
|---|
| >1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* | Back alignment and structure |
|---|
| >1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* | Back alignment and structure |
|---|
| >1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A | Back alignment and structure |
|---|
| >2wnw_A Activated by transcription factor SSRB; hydrolase, salmonella typhimurium, O-glycosyl hydrolase family 30; 2.00A {Salmonella enterica subsp} | Back alignment and structure |
|---|
| >3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A | Back alignment and structure |
|---|
| >3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A | Back alignment and structure |
|---|
| >1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A | Back alignment and structure |
|---|
| >3gyc_A Putative glycoside hydrolase; YP_001304622.1, structural GEN joint center for structural genomics, JCSG; HET: MSE; 1.85A {Parabacteroides distasonis atcc 8503} | Back alignment and structure |
|---|
| >2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A* | Back alignment and structure |
|---|
| >2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A | Back alignment and structure |
|---|
| >3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A | Back alignment and structure |
|---|
| >3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A* | Back alignment and structure |
|---|
| >1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ... | Back alignment and structure |
|---|
| >1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 | Back alignment and structure |
|---|
| >1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A | Back alignment and structure |
|---|
| >3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} | Back alignment and structure |
|---|
| >1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens} | Back alignment and structure |
|---|
| >2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A* | Back alignment and structure |
|---|
| >3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A | Back alignment and structure |
|---|
| >2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* | Back alignment and structure |
|---|
| >3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum} | Back alignment and structure |
|---|
| >2nt0_A Glucosylceramidase; cerezyme, glucocerebrosidase, glucosylceramide, hydrolysis, disease, hydrolase; HET: NAG; 1.79A {Homo sapiens} SCOP: b.71.1.2 c.1.8.3 PDB: 1y7v_A* 2f61_A* 2j25_A* 2nsx_A* 1ogs_A* 2nt1_A* 3gxd_A* 3gxf_A* 3gxi_A* 3gxm_A* 3rik_A* 3ril_A* 2v3f_A* 2v3e_A* 2v3d_A* 2vt0_A* 2wcg_A* 2xwd_A* 2xwe_A* 2wkl_A* ... | Back alignment and structure |
|---|
| >1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ... | Back alignment and structure |
|---|
| >2y24_A Xylanase; hydrolase, GH5 family, aldotetraouronic acid; HET: XYP GCV PG4 PGE; 1.39A {Erwinia chrysanthemi} PDB: 1nof_A* | Back alignment and structure |
|---|
| >3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* | Back alignment and structure |
|---|
| >2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* | Back alignment and structure |
|---|
| >1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* | Back alignment and structure |
|---|
| >1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
| >2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A | Back alignment and structure |
|---|
| >4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} | Back alignment and structure |
|---|
| >3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} | Back alignment and structure |
|---|
| >3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} | Back alignment and structure |
|---|
| >1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1 | Back alignment and structure |
|---|
| >3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* | Back alignment and structure |
|---|
| >2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A* | Back alignment and structure |
|---|
| >2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} | Back alignment and structure |
|---|
| >3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* | Back alignment and structure |
|---|
| >3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A | Back alignment and structure |
|---|
| >3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* | Back alignment and structure |
|---|
| >1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A | Back alignment and structure |
|---|
| >2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* | Back alignment and structure |
|---|
| >1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* | Back alignment and structure |
|---|
| >1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A* | Back alignment and structure |
|---|
| >3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* | Back alignment and structure |
|---|
| >2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A* | Back alignment and structure |
|---|
| >1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A | Back alignment and structure |
|---|
| >3ro8_A Endo-1,4-beta-xylanase; glycosyl hydrolase family 10, GH10, (beta/alpha)8 fold, XYLA hydrolase; 1.34A {Paenibacillus SP} PDB: 3rdk_A 4e4p_A | Back alignment and structure |
|---|
| >3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} | Back alignment and structure |
|---|
| >4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides} | Back alignment and structure |
|---|
| >2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A* | Back alignment and structure |
|---|
| >3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A | Back alignment and structure |
|---|
| >1vff_A Beta-glucosidase; glycosyl hydrolase, membrane-bound enzyme, thermostability, TIM barrel, alkylglucosides; 2.50A {Pyrococcus horikoshii} SCOP: c.1.8.4 | Back alignment and structure |
|---|
| >1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 | Back alignment and structure |
|---|
| >1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 615 | ||||
| d1tg7a5 | 354 | c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-ter | 1e-66 |
| >d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} Length = 354 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Glycosyl hydrolases family 35 catalytic domain domain: Beta-galactosidase LacA, N-terminal domain species: Penicillium sp. [TaxId: 5081]
Score = 219 bits (559), Expect = 1e-66
Identities = 82/290 (28%), Positives = 113/290 (38%), Gaps = 39/290 (13%)
Query: 2 DQYDFSGNLDFIKFFKLVQEAGLYAIIRIGPYVCSEWNYGGFPVWLHNIPGIQLRTNNEI 61
Y G D FF +EAG+Y + R GPY+ +E + GGFP WL + GI LRT++E
Sbjct: 67 GHYSAEGIFDLQPFFDAAKEAGIYLLARPGPYINAEVSGGGFPGWLQRVDGI-LRTSDEA 125
Query: 62 YKNEMQIFTTKIVNMCKEANLFAPQGGPIILAQIENEYGNIMGPYKEAG-KSYINWCAQM 120
Y + + I + GGPIIL Q ENEY Y SY+ +
Sbjct: 126 YLKATDNYASNIAATIAK--AQITNGGPIILYQPENEYSGACCGYNGFPDGSYMQYIEDH 183
Query: 121 ATSQNIGVPWIMC----QQSDAPQPMINTCNGFYCDEFVP-------------------- 156
A I VP+I +AP + + D +
Sbjct: 184 ARDAGIVVPFISNDAWAAGHNAPGTGAGAVDIYGHDSYPLGFDCANPSTWPSGNLPTYFH 243
Query: 157 -----NNPKSPKMWTENWTGWFKKWGDKDPHRTPQDVSFAVARFFQ-----AGGVLQNYY 206
+P +P E G F WG + ++ R F G N Y
Sbjct: 244 TSHEQQSPSTPYSLVEFQGGAFDPWGGVGFAKCAALLNHEFERVFYKNDFSFGVAFLNLY 303
Query: 207 MYHGGTNFGRDAGGPFIITSYDYDAPLDEYGNLNQPKWGHLKQLHEAIKL 256
M GGTN+G G P TSYDY + + E N+ + K+ LK L K+
Sbjct: 304 MIFGGTNWGN-LGHPGGYTSYDYGSAISESRNITREKYSELKLLGNFAKV 352
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 615 | |||
| d1tg7a5 | 354 | Beta-galactosidase LacA, N-terminal domain {Penici | 100.0 | |
| d1kwga2 | 393 | A4 beta-galactosidase {Thermus thermophilus [TaxId | 98.43 | |
| d1tg7a2 | 182 | Beta-galactosidase LacA, domains 4 and 5 {Penicill | 98.34 | |
| d1tg7a3 | 163 | Beta-galactosidase LacA, domains 4 and 5 {Penicill | 98.26 | |
| d1rh9a1 | 370 | Beta-mannanase {Tomato (Lycopersicon esculentum) [ | 97.97 | |
| d2vzsa5 | 339 | Exochitosanase CsxA {Amycolatopsis orientalis [Tax | 97.55 | |
| d2vzsa4 | 184 | Exochitosanase CsxA {Amycolatopsis orientalis [Tax | 97.25 | |
| d1bhga2 | 204 | beta-Glucuronidase {Human (Homo sapiens) [TaxId: 9 | 97.13 | |
| d1fh9a_ | 312 | Xylanase A, catalytic core {Cellulomonas fimi [Tax | 96.9 | |
| d1jz8a3 | 207 | beta-Galactosidase {Escherichia coli [TaxId: 562]} | 96.85 | |
| d1uhva2 | 346 | Beta-D-xylosidase, catalytic domain {Thermoanaerob | 96.8 | |
| d1yq2a3 | 216 | beta-Galactosidase {Arthrobacter sp. c2-2 [TaxId: | 96.72 | |
| d2pb1a1 | 394 | Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) | 96.64 | |
| d2je8a4 | 192 | Beta-mannosidase {Bacteroides thetaiotaomicron [Ta | 96.45 | |
| d1bhga3 | 304 | beta-Glucuronidase, domain 3 {Human (Homo sapiens) | 96.42 | |
| d1qnra_ | 344 | Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | 96.32 | |
| d1ceoa_ | 340 | Endoglucanase CelC {Clostridium thermocellum [TaxI | 96.11 | |
| d1uuqa_ | 410 | Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | 96.09 | |
| d1jz8a5 | 292 | beta-Galactosidase, domain 3 {Escherichia coli [Ta | 95.7 | |
| d1ta3b_ | 301 | Xylanase A, catalytic core {Emericella nidulans (A | 95.49 | |
| d1bqca_ | 302 | Beta-mannanase {Thermomonospora fusca [TaxId: 2021 | 95.24 | |
| d7a3ha_ | 300 | Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId | 94.91 | |
| d1n82a_ | 330 | Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId | 94.6 | |
| d1h4pa_ | 408 | Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom | 94.19 | |
| d1vbua1 | 324 | Xylanase {Thermotoga maritima [TaxId: 2336]} | 94.14 | |
| d1wkya2 | 297 | Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 | 93.65 | |
| d1egza_ | 291 | Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: | 93.6 | |
| d1ur1a_ | 350 | Xylanase {Cellvibrio mixtus [TaxId: 39650]} | 93.47 | |
| d1us3a2 | 364 | Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] | 93.44 | |
| d1vjza_ | 325 | Endoglucanase homologue TM1752 {Thermotoga maritim | 93.31 | |
| d2vzsa4 | 184 | Exochitosanase CsxA {Amycolatopsis orientalis [Tax | 93.19 | |
| d1xyza_ | 320 | Xylanase {Clostridium thermocellum, XynZ [TaxId: 1 | 93.16 | |
| d1i1wa_ | 303 | Xylanase A, catalytic core {Thermoascus aurantiacu | 93.11 | |
| d1ur4a_ | 387 | Beta-1,4-galactanase {Bacillus licheniformis [TaxI | 93.06 | |
| d1v0la_ | 302 | Xylanase A, catalytic core {Streptomyces lividans | 92.59 | |
| d1nq6a_ | 302 | Xylanase A, catalytic core {Streptomyces halstedii | 92.53 | |
| d2c0ha1 | 350 | endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed | 92.52 | |
| d1w32a_ | 346 | Xylanase A, catalytic core {Pseudomonas fluorescen | 91.75 | |
| d1r85a_ | 371 | Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: | 91.5 | |
| d1b1ya_ | 500 | beta-Amylase {Barley (Hordeum vulgare) [TaxId: 451 | 91.47 | |
| d1hjsa_ | 332 | Beta-1,4-galactanase {Thielavia heterothallica, ak | 91.06 | |
| d1bhga2 | 204 | beta-Glucuronidase {Human (Homo sapiens) [TaxId: 9 | 90.95 | |
| d1nofa2 | 277 | Glycosyl hydrolase family 5 xylanase, catalytic do | 90.57 | |
| d1foba_ | 334 | Beta-1,4-galactanase {Fungus (Aspergillus aculeatu | 90.15 | |
| d1vema2 | 417 | Bacterial beta-amylase {Bacillus cereus [TaxId: 13 | 90.09 | |
| d1tvna1 | 293 | Endoglucanase Cel5a {Pseudoalteromonas haloplankti | 87.88 | |
| d2je8a4 | 192 | Beta-mannosidase {Bacteroides thetaiotaomicron [Ta | 87.61 | |
| d1ecea_ | 358 | Endocellulase E1 {Acidothermus cellulolyticus [Tax | 87.36 | |
| d1tg7a2 | 182 | Beta-galactosidase LacA, domains 4 and 5 {Penicill | 87.17 | |
| d1yq2a3 | 216 | beta-Galactosidase {Arthrobacter sp. c2-2 [TaxId: | 86.02 | |
| d1fa2a_ | 498 | beta-Amylase {Sweet potato (Ipomoea batatas) [TaxI | 85.18 | |
| d1jz8a3 | 207 | beta-Galactosidase {Escherichia coli [TaxId: 562]} | 84.25 | |
| d1wdpa1 | 490 | beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} | 82.36 |
| >d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Glycosyl hydrolases family 35 catalytic domain domain: Beta-galactosidase LacA, N-terminal domain species: Penicillium sp. [TaxId: 5081]
Probab=100.00 E-value=3.1e-52 Score=441.54 Aligned_cols=252 Identities=32% Similarity=0.516 Sum_probs=208.6
Q ss_pred CceeeccCcchHHHHHHHHHHcCcEEEEecCceeccccCCCCcCcccccCCCceeecCChhhHHHHHHHHHHHHHHHHhc
Q 045354 1 GDQYDFSGNLDFIKFFKLVQEAGLYAIIRIGPYVCSEWNYGGFPVWLHNIPGIQLRTNNEIYKNEMQIFTTKIVNMCKEA 80 (615)
Q Consensus 1 ~G~~dF~G~~Dl~~Fl~la~e~GL~VilRpGPYIcaEw~~GGlP~WL~~~~~~~lRs~d~~yl~~v~~~~~~l~~~i~~~ 80 (615)
||+|||+|.+||++||++|+|+||+||||||||+|+||.+||+|.|+.+.++ .+|++||.|++++++|+++|+++++
T Consensus 66 ~g~~df~~~~~l~~~l~~a~~~Gl~vil~~g~~~~~~w~~~~~p~~~~~~~~-~~r~~~~~~~~~~~~~~~~~~~~~~-- 142 (354)
T d1tg7a5 66 PGHYSAEGIFDLQPFFDAAKEAGIYLLARPGPYINAEVSGGGFPGWLQRVDG-ILRTSDEAYLKATDNYASNIAATIA-- 142 (354)
T ss_dssp TTBCCCCGGGCSHHHHHHHHHHTCEEEEECCSCCCTTBGGGGCCGGGGGCSS-CTTSSCHHHHHHHHHHHHHHHHHHH--
T ss_pred CCcccccchhhHHHHHHHHHHcCCEEEEcCCCCcCcccccCCCCcccccCCC-cccCCCHHHHHHHHHHHHHHHHHHH--
Confidence 6999999999999999999999999999999999999999999999998776 4999999999999999999999999
Q ss_pred CccccCCCceEEEeeccccccccC-CCccccHHHHHHHHHHHHhCCCccceEEecCCC----CCcc---ccccC------
Q 045354 81 NLFAPQGGPIILAQIENEYGNIMG-PYKEAGKSYINWCAQMATSQNIGVPWIMCQQSD----APQP---MINTC------ 146 (615)
Q Consensus 81 ~l~~~~GGpII~vQiENEyg~~~~-~~g~~~~~Ym~~L~~~~~~~gi~vP~~~~~~~~----~~~~---~~~t~------ 146 (615)
+++++|||||||+|||||||.+.. ..+.++++|+++|++++++.++++|+++++... .++. +++..
T Consensus 143 ~~~~~n~~~ii~wqi~NE~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~d~yg~~~~~ 222 (354)
T d1tg7a5 143 KAQITNGGPIILYQPENEYSGACCGYNGFPDGSYMQYIEDHARDAGIVVPFISNDAWAAGHNAPGTGAGAVDIYGHDSYP 222 (354)
T ss_dssp HTBGGGTSSEEEECCSSCCCCBCTTCCCCSCHHHHHHHHHHHHHTTCCSCBBCCBSSSSCTTCTTSCTTCCSBCEEEECT
T ss_pred HHHhccCCCceEEEeccccCccccccccchHHHHHHHHHhhhhccCcccceEeccchhhccCCCCcccccccccccccCC
Confidence 788899999999999999997642 234578999999999999999999999987531 1111 11110
Q ss_pred CCcccCCC----------------CCCCCCCCceeeecccccccccCCCCCCCChHHHHHHHH-----HHHHcCCceeee
Q 045354 147 NGFYCDEF----------------VPNNPKSPKMWTENWTGWFKKWGDKDPHRTPQDVSFAVA-----RFFQAGGVLQNY 205 (615)
Q Consensus 147 ng~~~~~~----------------~~~~p~~P~~~~E~~~Gwf~~wG~~~~~~~~~~~~~~~~-----~~l~~g~s~~n~ 205 (615)
.++.|..+ ...+|.+|.|++||++||+++||++...+++++++..+. ..++.|++++||
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~~~E~~~g~~~~wG~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 302 (354)
T d1tg7a5 223 LGFDCANPSTWPSGNLPTYFHTSHEQQSPSTPYSLVEFQGGAFDPWGGVGFAKCAALLNHEFERVFYKNDFSFGVAFLNL 302 (354)
T ss_dssp TCSCCSCTTCCCTTCSCCCHHHHHHHHCTTSCCEEEEEESSCCCCTTCCCHHHHHHHTSHHHHHHHHHHHHTTTCSEEEE
T ss_pred CccccCCcccccccccchHHHHHHhhcCCccceeeeccccccccccCCCccccCHHHHHHHHHHHHHhhhhhccccceEE
Confidence 11122110 123589999999999999999999876666555444333 346778888999
Q ss_pred eeeecCCCCCCCCCCCCccccCCCCCCCCCCCCCCChhHHHHHHHHHHHhh
Q 045354 206 YMYHGGTNFGRDAGGPFIITSYDYDAPLDEYGNLNQPKWGHLKQLHEAIKL 256 (615)
Q Consensus 206 YM~hGGTNfG~~~G~~~~~tSYDy~Api~E~G~~~~~ky~~lr~l~~~~~~ 256 (615)
||||||||||+++ .+...|||||+|||+|+|+++.++|.++|.|++|++.
T Consensus 303 YM~~GGTnfG~~~-~~~~~tsYdy~api~e~G~~~~~yy~~~k~l~~~~~~ 352 (354)
T d1tg7a5 303 YMIFGGTNWGNLG-HPGGYTSYDYGSAISESRNITREKYSELKLLGNFAKV 352 (354)
T ss_dssp ECSBCCBCCTTCB-CTTSCSBCCTTCSBCTTCCCCSHHHHHHHHHHHHHHT
T ss_pred eEEecccCCCCCC-CCCCCCCCCCCCeECcCCCCCHHHHHHHHHHHHHhcc
Confidence 9999999999996 4567899999999999999844567789999999875
|
| >d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1tg7a2 b.18.1.27 (A:667-848) Beta-galactosidase LacA, domains 4 and 5 {Penicillium sp. [TaxId: 5081]} | Back information, alignment and structure |
|---|
| >d1tg7a3 b.18.1.27 (A:849-1011) Beta-galactosidase LacA, domains 4 and 5 {Penicillium sp. [TaxId: 5081]} | Back information, alignment and structure |
|---|
| >d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} | Back information, alignment and structure |
|---|
| >d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
| >d2vzsa4 b.18.1.5 (A:42-225) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
| >d1bhga2 b.18.1.5 (A:22-225) beta-Glucuronidase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]} | Back information, alignment and structure |
|---|
| >d1jz8a3 b.18.1.5 (A:13-219) beta-Galactosidase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]} | Back information, alignment and structure |
|---|
| >d1yq2a3 b.18.1.5 (A:4-219) beta-Galactosidase {Arthrobacter sp. c2-2 [TaxId: 192168]} | Back information, alignment and structure |
|---|
| >d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
| >d2je8a4 b.18.1.5 (A:28-219) Beta-mannosidase {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
| >d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
| >d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
| >d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
| >d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1ta3b_ c.1.8.3 (B:) Xylanase A, catalytic core {Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]} | Back information, alignment and structure |
|---|
| >d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
| >d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} | Back information, alignment and structure |
|---|
| >d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} | Back information, alignment and structure |
|---|
| >d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
| >d1ur1a_ c.1.8.3 (A:) Xylanase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
| >d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} | Back information, alignment and structure |
|---|
| >d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d2vzsa4 b.18.1.5 (A:42-225) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
| >d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} | Back information, alignment and structure |
|---|
| >d1i1wa_ c.1.8.3 (A:) Xylanase A, catalytic core {Thermoascus aurantiacus [TaxId: 5087]} | Back information, alignment and structure |
|---|
| >d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} | Back information, alignment and structure |
|---|
| >d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
| >d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]} | Back information, alignment and structure |
|---|
| >d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} | Back information, alignment and structure |
|---|
| >d1w32a_ c.1.8.3 (A:) Xylanase A, catalytic core {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
| >d1r85a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1b1ya_ c.1.8.1 (A:) beta-Amylase {Barley (Hordeum vulgare) [TaxId: 4513]} | Back information, alignment and structure |
|---|
| >d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} | Back information, alignment and structure |
|---|
| >d1bhga2 b.18.1.5 (A:22-225) beta-Glucuronidase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1nofa2 c.1.8.3 (A:44-320) Glycosyl hydrolase family 5 xylanase, catalytic domain {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
| >d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} | Back information, alignment and structure |
|---|
| >d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
| >d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} | Back information, alignment and structure |
|---|
| >d2je8a4 b.18.1.5 (A:28-219) Beta-mannosidase {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
| >d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} | Back information, alignment and structure |
|---|
| >d1tg7a2 b.18.1.27 (A:667-848) Beta-galactosidase LacA, domains 4 and 5 {Penicillium sp. [TaxId: 5081]} | Back information, alignment and structure |
|---|
| >d1yq2a3 b.18.1.5 (A:4-219) beta-Galactosidase {Arthrobacter sp. c2-2 [TaxId: 192168]} | Back information, alignment and structure |
|---|
| >d1fa2a_ c.1.8.1 (A:) beta-Amylase {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
| >d1jz8a3 b.18.1.5 (A:13-219) beta-Galactosidase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1wdpa1 c.1.8.1 (A:6-495) beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|