Citrus Sinensis ID: 045378

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------10
Protein Sequence
IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYPYCP
Secondary Structure (PSIPRED)
cccHHHHHHHccccccccccccccccHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccccccccccccccccccccEEEEEcccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHccccccccccccccccHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHcccccccccccHHHccccccEccccccccccccccc
Coil and Loop (DISEMBL)
iisremfedllpyrndarcpargfyTYDAFIEAAqafpgfgnsgneTMRKREIAAFFAQtghettggwtdapggeyawgycyirqvspassdycypycp
Flexible Loop (DISEMBL)
IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTghettggwtdAPGGEYAWGYCYIRQvspassdycYPYCP
Low Complexity Region (SEG)
IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYPYCP
Disordered region (IsUnstruct)
*******EDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYPY**
Disordered Region (DISOPRED)
IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYPYCP
Disordered Region (DISEMBL)
IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYPYCP
Disordered Region (DISPRO)
IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASS**C*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYPYCP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	99	2.2.26 [Sep-21-2011]
Q09023	322	Endochitinase CH25 OS=Bra	N/A	no	0.959	0.295	0.645	1e-31
P16579	340	Acidic endochitinase WIN6	no	no	0.929	0.270	0.632	1e-31
P19171	335	Basic endochitinase B OS=	yes	no	0.959	0.283	0.635	4e-31
P85084	243	Endochitinase OS=Carica p	N/A	no	0.959	0.390	0.604	2e-30
P06215	328	Endochitinase OS=Phaseolu	N/A	no	0.929	0.280	0.627	3e-30
P36361	327	Endochitinase CH5B OS=Pha	N/A	no	0.929	0.281	0.627	5e-30
P24091	324	Endochitinase B OS=Nicoti	N/A	no	0.949	0.290	0.649	7e-30
P08252	329	Endochitinase A OS=Nicoti	N/A	no	0.949	0.285	0.649	8e-30
Q9FRV1	321	Basic endochitinase A OS=	N/A	no	0.959	0.295	0.604	4e-29
Q9FRV0	266	Basic endochitinase C OS=	N/A	no	0.959	0.357	0.593	5e-28

>sp|Q09023|CHI2_BRANA Endochitinase CH25 OS=Brassica napus PE=2 SV=1

 Score =  134 bits (338), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 62/96 (64%), Positives = 76/96 (79%), Gaps = 1/96 (1%)

Query: 1   IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
           IISR  F+D+L +RND  CPARGFYTYDAFI AA++FPGFG +G+   RK+EIAAFF QT
Sbjct: 74  IISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFFGQT 133

Query: 61  GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYP 96
            HETTGGW  AP G Y+WGYC+ ++ +P SS+YC P
Sbjct: 134 SHETTGGWATAPDGPYSWGYCFKQEQNP-SSNYCSP 168

Brassica napus (taxid: 3708)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 1EC: 4

>sp|P16579|CHI6_POPTR Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2

 Score =  134 bits (338), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 62/98 (63%), Positives = 75/98 (76%), Gaps = 6/98 (6%)

Query: 1   IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
           II +  F+ LL +RNDARCPA GFYTY+AFI AA+ FP FGN+G++ MRKREIAAF  QT
Sbjct: 92  IIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQT 151

Query: 61  GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYPYC 98
            HETTGGW DAP G YAWGYCY+++++      C PYC
Sbjct: 152 SHETTGGWPDAPCGPYAWGYCYLKEIN------CQPYC 183

Defense against chitin containing fungal pathogens.

Populus trichocarpa (taxid: 3694)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|P19171|CHIB_ARATH Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3

 Score =  133 bits (334), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 61/96 (63%), Positives = 76/96 (79%), Gaps = 1/96 (1%)

Query: 1   IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
           IIS   F+D+L +RNDA CPARGFYTY+AFI AA++FPGFG +G+   RK+E+AAFF QT
Sbjct: 89  IISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFFGQT 148

Query: 61  GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYP 96
            HETTGGW  AP G Y+WGYC+ ++ +PA SDYC P
Sbjct: 149 SHETTGGWATAPDGPYSWGYCFKQEQNPA-SDYCEP 183

Defense against chitin containing fungal pathogens. Seems particularly implicated in resistance to jasmonate-inducing pathogens such as A.brassicicola. In vitro antifungal activity against T.reesei, but not against A.solani, F.oxysporum, S.sclerotiorum, G.graminis and P.megasperma.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|P85084|CHIT_CARPA Endochitinase OS=Carica papaya PE=1 SV=1

 Score =  130 bits (327), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 58/96 (60%), Positives = 76/96 (79%), Gaps = 1/96 (1%)

Query: 1  IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
          IISR MF+ +L +RN+  CPA+GFYTYDAF+ AA++FP FG +G+  +RKRE+AAF  QT
Sbjct: 5  IISRSMFDQMLKHRNNPACPAKGFYTYDAFLAAAKSFPSFGTTGSTDVRKRELAAFLGQT 64

Query: 61 GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYP 96
           HETTGGW  AP G YAWGYC++++ +P SS+YC P
Sbjct: 65 SHETTGGWPSAPDGPYAWGYCFLKERNP-SSNYCAP 99

Defense against chitin containing fungal pathogens. Shows activity on chitin, tetra-N-acetylglucosamine and chitosan.

Carica papaya (taxid: 3649)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|P06215|CHIT_PHAVU Endochitinase OS=Phaseolus vulgaris PE=1 SV=1

 Score =  130 bits (326), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 59/94 (62%), Positives = 72/94 (76%), Gaps = 2/94 (2%)

Query: 1   IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
           +ISR  F+ +L +RND  CPA+GFYTYDAFI AA+A+P FGN+G+   RKREIAAF  QT
Sbjct: 79  LISRSTFDQMLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQT 138

Query: 61  GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYC 94
            HETTGGW  AP G YAWGYC++R+ +P  S YC
Sbjct: 139 SHETTGGWATAPDGPYAWGYCFVRERNP--STYC 170

Defense against chitin containing fungal pathogens.

Phaseolus vulgaris (taxid: 3885)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|P36361|CHI5_PHAVU Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1

 Score =  129 bits (324), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 59/94 (62%), Positives = 72/94 (76%), Gaps = 2/94 (2%)

Query: 1   IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
           +ISR  F+ +L +RND  CPA+GFYTYDAFI AA+A+P FGN+G+   RKREIAAF  QT
Sbjct: 78  LISRSTFDQVLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQT 137

Query: 61  GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYC 94
            HETTGGW  AP G YAWGYC++R+ +P  S YC
Sbjct: 138 SHETTGGWATAPDGPYAWGYCFVRERNP--SAYC 169

Defense against chitin containing fungal pathogens.

Phaseolus vulgaris (taxid: 3885)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|P24091|CHI2_TOBAC Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1

 Score =  129 bits (323), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 63/97 (64%), Positives = 74/97 (76%), Gaps = 3/97 (3%)

Query: 1   IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
           IIS  MF+ +L +RND  C  +GFY+Y+AFI AA++FPGFG SG+ T RKREIAAFFAQT
Sbjct: 78  IISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQT 137

Query: 61  GHETTGGWTDAPGGEYAWGYCYIR-QVSPASSDYCYP 96
            HETTGGW  AP G YAWGYC++R Q SP   DYC P
Sbjct: 138 SHETTGGWATAPDGPYAWGYCWLREQGSPG--DYCTP 172

Defense against chitin containing fungal pathogens.

Nicotiana tabacum (taxid: 4097)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|P08252|CHI1_TOBAC Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2

 Score =  128 bits (322), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 63/97 (64%), Positives = 74/97 (76%), Gaps = 3/97 (3%)

Query: 1   IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
           IIS  MF+ +L +RND  C  +GFY+Y+AFI AA++FPGFG SG+ T RKREIAAFFAQT
Sbjct: 83  IISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQT 142

Query: 61  GHETTGGWTDAPGGEYAWGYCYIR-QVSPASSDYCYP 96
            HETTGGW  AP G YAWGYC++R Q SP   DYC P
Sbjct: 143 SHETTGGWATAPDGPYAWGYCWLREQGSPG--DYCTP 177

Defense against chitin containing fungal pathogens.

Nicotiana tabacum (taxid: 4097)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q9FRV1|CHIA_SECCE Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1

 Score =  126 bits (316), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 58/96 (60%), Positives = 73/96 (76%), Gaps = 1/96 (1%)

Query: 1   IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
           I+SR +F+ +L +RND  C A+GFYTYDAF+ AA AFPGFG +G+   RKRE+AAF AQT
Sbjct: 83  IVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAAGAFPGFGTTGSTDTRKREVAAFLAQT 142

Query: 61  GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYP 96
            HETTGGW  AP G +AWGYC+ +Q   A+S+YC P
Sbjct: 143 SHETTGGWATAPDGAFAWGYCF-KQERGATSNYCTP 177

Defense against chitin containing fungal pathogens. Binds the hyphal tips, lateral walls and septa of fungi and degrades mature chitin.

Secale cereale (taxid: 4550)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q9FRV0|CHIC_SECCE Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1

 Score =  122 bits (307), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 57/96 (59%), Positives = 71/96 (73%), Gaps = 1/96 (1%)

Query: 1   IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
           IIS   F+ +L +RND  C A+GFYTYDAF+ AA AFPGFG +G+   RKR++AAF AQT
Sbjct: 28  IISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQT 87

Query: 61  GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYP 96
            HETTGGW  AP G +AWGYC+ +Q   A++DYC P
Sbjct: 88  SHETTGGWATAPDGAFAWGYCF-KQERGAAADYCTP 122

Defense against chitin containing fungal pathogens. Binds the hyphal tips of fungi and degrades nascent chitin.

Secale cereale (taxid: 4550)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	99
23496447	293	acidic class II chitinase [Citrus jambhi	1.0	0.337	0.909	3e-46
1220144	292	chitinase [Citrus sinensis]	0.989	0.335	0.878	7e-43
23496445	310	acidic class I chitinase [Citrus jambhir	0.989	0.316	0.838	5e-40
374719235	341	chitinase 4 [Populus x canadensis]	0.929	0.269	0.653	5e-31
224080749	321	predicted protein [Populus trichocarpa]	0.949	0.292	0.677	5e-31
312282993	322	unnamed protein product [Thellungiella h	0.959	0.295	0.656	3e-30
584928	322	RecName: Full=Endochitinase CH25; Flags:	0.959	0.295	0.645	5e-30
1705811	340	RecName: Full=Acidic endochitinase WIN6;	0.929	0.270	0.632	6e-30
7798632	299	class I chitinase [Boechera holboellii]	0.959	0.317	0.635	1e-29
5689102	335	basic endochitinase [Arabidopsis thalian	0.959	0.283	0.635	1e-29

>gi|23496447|dbj|BAC20285.1| acidic class II chitinase [Citrus jambhiri]

 Score =  188 bits (478), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 90/99 (90%), Positives = 92/99 (92%)

Query: 1   IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
           IISREMFEDLLPYRND RCPARGFYTYDAFIEAA+AFP FGNSGNETMRKREIAAFFAQT
Sbjct: 48  IISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQT 107

Query: 61  GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYPYCP 99
           G ETTGGW DAPGGEYAWGYCYIRQVS  +SDYCY YCP
Sbjct: 108 GDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCP 146

Source: Citrus jambhiri

Species: Citrus jambhiri

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|1220144|emb|CAA93847.1| chitinase [Citrus sinensis]

 Score =  177 bits (449), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 87/99 (87%), Positives = 90/99 (90%), Gaps = 1/99 (1%)

Query: 1   IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
           IISREMF+DLL YRND RCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT
Sbjct: 48  IISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 107

Query: 61  GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYPYCP 99
           GHETTGGW DAPGGEYAWGYC+I +VSP  SDYC P  P
Sbjct: 108 GHETTGGWPDAPGGEYAWGYCFISEVSPP-SDYCDPNYP 145

Source: Citrus sinensis

Species: Citrus sinensis

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|23496445|dbj|BAC20284.1| acidic class I chitinase [Citrus jambhiri]

 Score =  168 bits (425), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 83/99 (83%), Positives = 87/99 (87%), Gaps = 1/99 (1%)

Query: 1   IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
           IISREMF+DLL YRND RCPAR FYTYD FIEAA+AFP FGNSGNETMRKREIAAFFAQT
Sbjct: 82  IISREMFDDLLEYRNDKRCPARCFYTYDDFIEAAKAFPAFGNSGNETMRKREIAAFFAQT 141

Query: 61  GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYPYCP 99
           GHETTGGW DAPGGEYAWGYC+ R+VSP  SDYC P  P
Sbjct: 142 GHETTGGWPDAPGGEYAWGYCFKREVSPP-SDYCDPNYP 179

Source: Citrus jambhiri

Species: Citrus jambhiri

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|374719235|gb|AEZ67303.1| chitinase 4 [Populus x canadensis]

 Score =  138 bits (347), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 64/98 (65%), Positives = 76/98 (77%), Gaps = 6/98 (6%)

Query: 1   IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
           IIS+  F+ LL +RNDARCPA GFYTYDAFI AA+ FP FGN+G++ MRKREIAAF  QT
Sbjct: 92  IISKSKFDALLKFRNDARCPAVGFYTYDAFISAAKEFPDFGNTGDDLMRKREIAAFLGQT 151

Query: 61  GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYPYC 98
            HETTGGW DAP G YAWGYCY+++++      C PYC
Sbjct: 152 SHETTGGWPDAPCGPYAWGYCYLKEIN------CQPYC 183

Source: Populus x canadensis

Species: Populus x canadensis

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224080749|ref|XP_002306220.1| predicted protein [Populus trichocarpa] gi|222849184|gb|EEE86731.1| predicted protein [Populus trichocarpa]

 Score =  138 bits (347), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 65/96 (67%), Positives = 75/96 (78%), Gaps = 2/96 (2%)

Query: 1   IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
           IISRE F ++L +RND  CPA+GFYTYDAFI AA+AFPGFG +G+   RKREIAAFF QT
Sbjct: 74  IISREKFNEMLKHRNDGGCPAKGFYTYDAFISAAKAFPGFGTTGDVATRKREIAAFFGQT 133

Query: 61  GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYP 96
            HETTGGW  AP G YAWGYCY+R+ +P S  YC P
Sbjct: 134 SHETTGGWQTAPDGPYAWGYCYVREQNPGS--YCAP 167

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|312282993|dbj|BAJ34362.1| unnamed protein product [Thellungiella halophila]

 Score =  135 bits (340), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 63/96 (65%), Positives = 76/96 (79%), Gaps = 1/96 (1%)

Query: 1   IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
           IISR  F+D+L +RND  CPARGFYTYDAF+ AA++FPGFG +G+   RK+EIAAFF QT
Sbjct: 74  IISRSQFDDMLKHRNDGACPARGFYTYDAFLTAAKSFPGFGTTGDTAARKKEIAAFFGQT 133

Query: 61  GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYP 96
            HETTGGW  AP G YAWGYC+ ++ +P SSDYC P
Sbjct: 134 SHETTGGWPTAPDGPYAWGYCFKQEQNP-SSDYCSP 168

Source: Thellungiella halophila

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|584928|sp|Q09023.1|CHI2_BRANA RecName: Full=Endochitinase CH25; Flags: Precursor gi|167130|gb|AAA32986.1| endochitinase [Brassica napus]

 Score =  134 bits (338), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 62/96 (64%), Positives = 76/96 (79%), Gaps = 1/96 (1%)

Query: 1   IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
           IISR  F+D+L +RND  CPARGFYTYDAFI AA++FPGFG +G+   RK+EIAAFF QT
Sbjct: 74  IISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFFGQT 133

Query: 61  GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYP 96
            HETTGGW  AP G Y+WGYC+ ++ +P SS+YC P
Sbjct: 134 SHETTGGWATAPDGPYSWGYCFKQEQNP-SSNYCSP 168

Source: Brassica napus

Species: Brassica napus

Genus: Brassica

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|1705811|sp|P16579.2|CHI6_POPTR RecName: Full=Acidic endochitinase WIN6; Flags: Precursor gi|1084327|pir||S48030 probable chitinase (EC 3.2.1.14), acidic four domain - western balsam poplar x cottonwood gi|403414|gb|AAA57277.1| putative acidic four domain chitinase [Populus trichocarpa x Populus deltoides] gi|403416|gb|AAA57278.1| putative acidic four domain chitinase [Populus trichocarpa x Populus deltoides]

 Score =  134 bits (338), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 62/98 (63%), Positives = 75/98 (76%), Gaps = 6/98 (6%)

Query: 1   IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
           II +  F+ LL +RNDARCPA GFYTY+AFI AA+ FP FGN+G++ MRKREIAAF  QT
Sbjct: 92  IIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQT 151

Query: 61  GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYPYC 98
            HETTGGW DAP G YAWGYCY+++++      C PYC
Sbjct: 152 SHETTGGWPDAPCGPYAWGYCYLKEIN------CQPYC 183

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|7798632|gb|AAF69770.1|AF135130_1 class I chitinase [Boechera holboellii]

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 61/96 (63%), Positives = 77/96 (80%), Gaps = 1/96 (1%)

Query: 1   IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
           IIS   F+D+L +RNDA CPARGFYTY+AFI AA++FPGFG +G+   RK+EIAAFF QT
Sbjct: 54  IISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEIAAFFGQT 113

Query: 61  GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYP 96
            HETTGGW  AP G ++WGYC+ ++V+P +SDYC P
Sbjct: 114 SHETTGGWASAPDGPFSWGYCFKQEVNP-NSDYCEP 148

Source: Boechera holboellii

Species: Boechera holboellii

Genus: Boechera

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|5689102|dbj|BAA82810.1| basic endochitinase [Arabidopsis thaliana]

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 61/96 (63%), Positives = 76/96 (79%), Gaps = 1/96 (1%)

Query: 1   IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
           IIS   F+D+L +RNDA CPARGFYTY+AFI AA++FPGFG +G+   RK+E+AAFF QT
Sbjct: 89  IISSSQFDDMLKHRNDATCPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFFGQT 148

Query: 61  GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYP 96
            HETTGGW  AP G Y+WGYC+ ++ +PA SDYC P
Sbjct: 149 SHETTGGWATAPDGPYSWGYCFKQEQNPA-SDYCEP 183

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	99
UNIPROTKB|Q7DNA1	340	Cht2 "Chitinase 2" [Oryza sati	0.959	0.279	0.604	1.8e-30
UNIPROTKB|Q9FRV1	321	rsca "Basic endochitinase A" [	0.959	0.295	0.604	6.2e-30
UNIPROTKB|Q9FRV0	266	rscc "Basic endochitinase C" [	0.959	0.357	0.593	3.4e-29
UNIPROTKB|Q42993	323	Cht1 "Chitinase 1" [Oryza sati	0.949	0.291	0.578	9.1e-29
UNIPROTKB|P25765	326	Cht12 "Chitinase 12" [Oryza sa	0.949	0.288	0.583	6.4e-28
UNIPROTKB|P24626	320	Cht3 "Chitinase 3" [Oryza sati	0.969	0.3	0.531	5.2e-26
TAIR|locus:2133412	280	AT4G01700 [Arabidopsis thalian	0.939	0.332	0.5	4.6e-25
TAIR|locus:2204918	272	AT1G02360 [Arabidopsis thalian	0.939	0.341	0.457	1.8e-23
UNIPROTKB|A7XQ02	415	A7XQ02 "Mulatexin" [Morus alba	0.959	0.228	0.471	1.2e-19
TAIR|locus:2198688	321	POM1 "POM-POM1" [Arabidopsis t	0.878	0.271	0.444	1.4e-13

UNIPROTKB|Q7DNA1 Cht2 "Chitinase 2" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 58/96 (60%), Positives = 72/96 (75%)

Query:     1 IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
             I+ R++FE LL +RND  CPARGFYTY+AF+ AA AFP FG +GN   RKRE+AAF  QT
Sbjct:    92 IVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFLGQT 151

Query:    61 GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYP 96
              HETTGGW  AP G ++WGYC+ ++ +P S DYC P
Sbjct:   152 SHETTGGWPTAPDGPFSWGYCFKQEQNPPS-DYCQP 186

GO:0004568 "chitinase activity" evidence=IDA

GO:0050832 "defense response to fungus" evidence=IDA

UNIPROTKB|Q9FRV1 rsca "Basic endochitinase A" [Secale cereale (taxid:4550)]

 Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
 Identities = 58/96 (60%), Positives = 73/96 (76%)

Query:     1 IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
             I+SR +F+ +L +RND  C A+GFYTYDAF+ AA AFPGFG +G+   RKRE+AAF AQT
Sbjct:    83 IVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAAGAFPGFGTTGSTDTRKREVAAFLAQT 142

Query:    61 GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYP 96
              HETTGGW  AP G +AWGYC+ +Q   A+S+YC P
Sbjct:   143 SHETTGGWATAPDGAFAWGYCF-KQERGATSNYCTP 177

GO:0004568 "chitinase activity" evidence=IDA

GO:0005576 "extracellular region" evidence=IC

GO:0008061 "chitin binding" evidence=IDA

GO:0016998 "cell wall macromolecule catabolic process" evidence=IDA

GO:0050832 "defense response to fungus" evidence=IDA

UNIPROTKB|Q9FRV0 rscc "Basic endochitinase C" [Secale cereale (taxid:4550)]

 Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 57/96 (59%), Positives = 71/96 (73%)

Query:     1 IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
             IIS   F+ +L +RND  C A+GFYTYDAF+ AA AFPGFG +G+   RKR++AAF AQT
Sbjct:    28 IISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQT 87

Query:    61 GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYP 96
              HETTGGW  AP G +AWGYC+ +Q   A++DYC P
Sbjct:    88 SHETTGGWATAPDGAFAWGYCF-KQERGAAADYCTP 122

GO:0004568 "chitinase activity" evidence=IDA

GO:0005576 "extracellular region" evidence=IC

GO:0016998 "cell wall macromolecule catabolic process" evidence=IDA

GO:0050832 "defense response to fungus" evidence=IDA

UNIPROTKB|Q42993 Cht1 "Chitinase 1" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
 Identities = 55/95 (57%), Positives = 69/95 (72%)

Query:     1 IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
             I+SR +F+ +L +RNDA CPA+ FYTYDAF+ AA AFP F  +G+   RKRE+AAF AQT
Sbjct:    82 IVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAFLAQT 141

Query:    61 GHETTGGWTDAPGGEYAWGYCYIRQVSP-ASSDYC 94
              HETTGGW  AP G Y+WGYC+  + +    SDYC
Sbjct:   142 SHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYC 176

GO:0004568 "chitinase activity" evidence=IDA

GO:0050832 "defense response to fungus" evidence=IEP

UNIPROTKB|P25765 Cht12 "Chitinase 12" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 56/96 (58%), Positives = 68/96 (70%)

Query:     1 IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNET-MRKREIAAFFAQ 59
             I+SR +F+ +L +RNDA CPA  FYTYDAF+ AA AFPGF  +G +    KRE+AAF AQ
Sbjct:    84 IVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFLAQ 143

Query:    60 TGHETTGGWTDAPGGEYAWGYCYIRQVSPASS-DYC 94
             T HETTGGW  AP G YAWGYC+  +   A+  DYC
Sbjct:   144 TSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYC 179

GO:0004568 "chitinase activity" evidence=IDA

GO:0006040 "amino sugar metabolic process" evidence=IDA

GO:0008061 "chitin binding" evidence=ISS

GO:0008843 "endochitinase activity" evidence=IDA

GO:0016231 "beta-N-acetylglucosaminidase activity" evidence=IDA

GO:0050832 "defense response to fungus" evidence=IDA

UNIPROTKB|P24626 Cht3 "Chitinase 3" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 51/96 (53%), Positives = 66/96 (68%)

Query:     1 IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
             IIS  +F+ +L +RND  C A+GFYTYDAF+ AA A+P F  +G+    KRE+AAF AQT
Sbjct:    79 IISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAFLAQT 138

Query:    61 GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYP 96
              HETTGGW  AP G Y+WGYC+  + +  +  YC P
Sbjct:   139 SHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEP 174

GO:0004568 "chitinase activity" evidence=IDA

GO:0006040 "amino sugar metabolic process" evidence=ISS

GO:0008061 "chitin binding" evidence=ISS

GO:0008843 "endochitinase activity" evidence=ISS

GO:0016231 "beta-N-acetylglucosaminidase activity" evidence=ISS

GO:0050832 "defense response to fungus" evidence=IDA

TAIR|locus:2133412 AT4G01700 [Arabidopsis thaliana (taxid:3702)]

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 47/94 (50%), Positives = 68/94 (72%)

Query:     1 IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
             ++ R +++ +  ++++  CPA+GFY Y+AF+EA ++FP FG+ GN   R+RE+AAF AQ 
Sbjct:    41 LVPRTLYDQIFIHKDNNACPAKGFYPYEAFVEATRSFPKFGSVGNFWTRRREVAAFLAQI 100

Query:    61 GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYC 94
              HETTGGW  AP G YAWG C+  +VSP  S+YC
Sbjct:   101 SHETTGGWATAPDGPYAWGLCFKEEVSP-QSNYC 133

GO:0004568 "chitinase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0016998 "cell wall macromolecule catabolic process" evidence=IEA

GO:0005618 "cell wall" evidence=IDA

GO:0050832 "defense response to fungus" evidence=IEP

GO:0006865 "amino acid transport" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2204918 AT1G02360 [Arabidopsis thaliana (taxid:3702)]

 Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 43/94 (45%), Positives = 66/94 (70%)

Query:     1 IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
             ++ R+++  +  ++++  CPA GFYTY++F++A + FP FG+ G+   ++ E+AAF AQ 
Sbjct:    33 LVPRDLYNKIFIHKDNTACPANGFYTYESFVQATRRFPRFGSVGSPVTQRLEVAAFLAQI 92

Query:    61 GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYC 94
              HETTGGW  AP G YAWG C+  +VSP S+ YC
Sbjct:    93 SHETTGGWATAPDGPYAWGLCFKEEVSPQST-YC 125

GO:0004568 "chitinase activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0016998 "cell wall macromolecule catabolic process" evidence=IEA

GO:0050832 "defense response to fungus" evidence=IEP

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006865 "amino acid transport" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

UNIPROTKB|A7XQ02 A7XQ02 "Mulatexin" [Morus alba (taxid:3498)]

 Score = 238 (88.8 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 49/104 (47%), Positives = 69/104 (66%)

Query:     1 IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
             IIS+ +F+++  +  D  CP++GFY+YDAFI A  +FP FG +G+ T RKRE+AAFFAQT
Sbjct:   184 IISKSVFDEMFKHMKD--CPSKGFYSYDAFIIATTSFPHFGTTGDITTRKRELAAFFAQT 241

Query:    61 GHETTGGWTDAPGGEYAWGYCYIRQVSPAS-SDYC----YPYCP 99
                TTG   D+    Y WGYC+I + +  + +DYC    +P CP
Sbjct:   242 SLATTGQRFDSQD-LYVWGYCHINETTNGNDNDYCTSAHWP-CP 283

GO:0002213 "defense response to insect" evidence=IDA

GO:0005576 "extracellular region" evidence=IDA

GO:0004568 "chitinase activity" evidence=IDA

GO:0006032 "chitin catabolic process" evidence=IDA

TAIR|locus:2198688 POM1 "POM-POM1" [Arabidopsis thaliana (taxid:3702)]

 Score = 180 (68.4 bits), Expect = 1.4e-13, P = 1.4e-13
 Identities = 40/90 (44%), Positives = 52/90 (57%)

Query:     7 FEDLLPYRNDARCPARGFYTYDAFIEAAQAF-P-GFGNSGNETMRKREIAAFFAQTGHET 64
             FE L   RN     A GF+ Y +FI AA  F P GFG +G + M ++E+AAF      +T
Sbjct:    69 FEQLFSKRNTPIAHAVGFWDYQSFITAAALFEPLGFGTTGGKLMGQKEMAAFLGHVASKT 128

Query:    65 TGGWTDAPGGEYAWGYCYIRQVSPASSDYC 94
             + G+  A GG  AWG CY R++SP  S YC
Sbjct:   129 SCGYGVATGGPLAWGLCYNREMSPMQS-YC 157

GO:0004568 "chitinase activity" evidence=IEA;ISS;IDA

GO:0005576 "extracellular region" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0016998 "cell wall macromolecule catabolic process" evidence=IEA

GO:0009408 "response to heat" evidence=IMP

GO:0009735 "response to cytokinin stimulus" evidence=IMP

GO:0009809 "lignin biosynthetic process" evidence=IGI

GO:0043255 "regulation of carbohydrate biosynthetic process" evidence=IGI

GO:0009414 "response to water deprivation" evidence=IMP

GO:0009651 "response to salt stress" evidence=RCA;IMP

GO:0010337 "regulation of salicylic acid metabolic process" evidence=IMP

GO:0010167 "response to nitrate" evidence=IMP

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0030244 "cellulose biosynthetic process" evidence=IMP

GO:0030247 "polysaccharide binding" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0006096 "glycolysis" evidence=RCA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0006972 "hyperosmotic response" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0007389 "pattern specification process" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009266 "response to temperature stimulus" evidence=RCA

GO:0009269 "response to desiccation" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=IMP;RCA

GO:0009926 "auxin polar transport" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010015 "root morphogenesis" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0016051 "carbohydrate biosynthetic process" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0030243 "cellulose metabolic process" evidence=RCA

GO:0040007 "growth" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0046686 "response to cadmium ion" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

GO:0010053 "root epidermal cell differentiation" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.2.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	99
cd00325	230	cd00325, chitinase_glyco_hydro_19, Glycoside hydro	2e-48
pfam00182	232	pfam00182, Glyco_hydro_19, Chitinase class I	5e-46

>gnl|CDD|238199 cd00325, chitinase_glyco_hydro_19, Glycoside hydrolase family 19 chitinase domain

 Score =  153 bits (388), Expect = 2e-48
 Identities = 54/98 (55%), Positives = 66/98 (67%)

Query: 2  ISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTG 61
          ++  +FE +  +RND+ CPA+GFYTYDAFI AA +FPGFG +G++  RKREIAAFFA T 
Sbjct: 1  VTESLFEGIFSHRNDSGCPAKGFYTYDAFITAANSFPGFGTTGDDDTRKREIAAFFAHTS 60

Query: 62 HETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYPYCP 99
          HET GG   AP G YAWGYC   +  P SS       P
Sbjct: 61 HETGGGCYIAPDGPYAWGYCDKSETGPPSSYCDPAQWP 98

Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases but they are smaller in size due to certain deletions. Despite any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the procaryotic/eucaryotic divergence. Length = 230

>gnl|CDD|201064 pfam00182, Glyco_hydro_19, Chitinase class I

 Score =  147 bits (372), Expect = 5e-46
 Identities = 61/96 (63%), Positives = 76/96 (79%), Gaps = 1/96 (1%)

Query: 1  IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
          I++R +F+ +L +RND  CP +GFYTYDAFI AA +FPGFG +G++  RKREIAAFFAQT
Sbjct: 1  IVTRSLFDQMLKHRNDGACPGKGFYTYDAFIAAANSFPGFGTTGDDDTRKREIAAFFAQT 60

Query: 61 GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYP 96
           HETTGGW  AP G YAWGYC++R+ +P  SDYC P
Sbjct: 61 SHETTGGWYTAPDGPYAWGYCFVREQNP-PSDYCTP 95

Length = 232

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	99
PF00182	232	Glyco_hydro_19: Chitinase class I; InterPro: IPR00	100.0
cd00325	230	chitinase_glyco_hydro_19 Glycoside hydrolase famil	100.0
KOG4742	286	consensus Predicted chitinase [General function pr	100.0
COG3179	206	Predicted chitinase [General function prediction o	94.67
cd00442	105	lysozyme_like lysozyme_like domain. This contains	80.21

>PF00182 Glyco_hydro_19: Chitinase class I; InterPro: IPR000726 O-Glycosyl hydrolases 3

Probab=100.00  E-value=1e-37  Score=239.19  Aligned_cols=96  Identities=54%  Similarity=1.067  Sum_probs=86.1

Q ss_pred             CCCHHHHhhhcCCCCCCCCCCCCcCCHHHHHHHHhcCCCCCCCCChHHHHHHHHHHHHhhhcccCCCccCCCCCCceeee
Q 045378            1 IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGY   80 (99)
Q Consensus         1 ivt~~~F~~lfp~rn~~~c~~~gfYTY~~fi~Aa~~fp~F~~tG~~~~~krElAAFfAh~shET~gg~~~a~~g~~~wgl   80 (99)
                      |||+++||+|||+||++.||+|+||||++||+|+++||+|+++|+++++||||||||||++|||+|+|...+.++++|||
T Consensus         1 ivt~~~F~~~~~~~n~~~c~~~~FYTY~~Fi~Aa~~fp~F~~tG~~~~~krElAAFLA~~~hET~g~~~~~e~~~~~~gy   80 (232)
T PF00182_consen    1 IVTESFFNQMFPHRNDNGCPGKGFYTYDAFIAAAKSFPAFGNTGDDEDRKRELAAFLAQVSHETGGFWYIEEIGPYAWGY   80 (232)
T ss_dssp             TS-HHHHHHHTTTTTSTTSTTTTTS-HHHHHHHHTTSTTTTTSSSHHHHHHHHHHHHHHHHHHTTTTTTTBTTSGGGGTT
T ss_pred             CCCHHHHHHHHhcCCccCCCCCCcccHHHHHHHhhcCchhccCccHHHHHHHHHhhhcccchhccccccccccccccccc
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEeecCCCCCCCCCCC
Q 045378           81 CYIRQVSPASSDYCYPY   97 (99)
Q Consensus        81 c~~~E~~~~~~~YC~~s   97 (99)
                      |+++|.++. .+||+.+
T Consensus        81 c~~~e~~~~-~~y~~~~   96 (232)
T PF00182_consen   81 CYKREKGAN-SDYCNRN   96 (232)
T ss_dssp             S-SB-SS-S-SGG--TT
T ss_pred             ccccccCCc-cccccCc
Confidence            999998866 8899763

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 19 GH19 from CAZY comprises enzymes with only one known activity; chitinase (3.2.1.14 from EC). Chitinases [] are enzymes that catalyse the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Chitinases belong to glycoside hydrolase families 18 or 19 []. Chitinases of family 19 (also known as classes IA or I and IB or II) are enzymes from plants that function in the defence against fungal and insect pathogens by destroying their chitin-containing cell wall. Class IA/I and IB/II enzymes differ in the presence (IA/I) or absence (IB/II) of a N-terminal chitin-binding domain. The catalytic domain of these enzymes consist of about 220 to 230 amino acid residues.; GO: 0004568 chitinase activity, 0006032 chitin catabolic process, 0016998 cell wall macromolecule catabolic process; PDB: 3IWR_A 2DKV_A 3CQL_A 2Z38_A 2Z37_D 2Z39_B 1DXJ_A 1WVU_B 1WVV_B 2DBT_C ....

>cd00325 chitinase_glyco_hydro_19 Glycoside hydrolase family 19 chitinase domain

Probab=100.00  E-value=2.6e-36  Score=231.63  Aligned_cols=93  Identities=58%  Similarity=1.134  Sum_probs=89.7

Q ss_pred             CCHHHHhhhcCCCCCCCCCCCCcCCHHHHHHHHhcCCCCCCCCChHHHHHHHHHHHHhhhcccCCCccCCCCCCceeeee
Q 045378            2 ISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYC   81 (99)
Q Consensus         2 vt~~~F~~lfp~rn~~~c~~~gfYTY~~fi~Aa~~fp~F~~tG~~~~~krElAAFfAh~shET~gg~~~a~~g~~~wglc   81 (99)
                      ||+++||+||||||+..||+++||||++||+|+++||+|+++|+++++||||||||||++|||+|+|..+++++++||||
T Consensus         1 ~t~~~f~~~~~~~~~~~c~~~~fYTy~~fi~Aa~~fp~f~~~g~~~~~krElAaFlAq~~hETgg~~~~~e~~~~~~g~c   80 (230)
T cd00325           1 VTESLFEGIFSHRNDSGCPAKGFYTYDAFITAANSFPGFGTTGDDDTRKREIAAFFAHTSHETGGGCYIAPDGPYAWGYC   80 (230)
T ss_pred             CCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHhccccccCCCchhhHHHHHHHHhhhcccCCCCccccccccccCCcc
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeecCCCCCCCCC
Q 045378           82 YIRQVSPASSDYCY   95 (99)
Q Consensus        82 ~~~E~~~~~~~YC~   95 (99)
                      +++|+++. .+||+
T Consensus        81 ~~~e~~~~-~~~~~   93 (230)
T cd00325          81 DKSETGPP-SSYCD   93 (230)
T ss_pred             ccccCCCc-ccccc
Confidence            99999977 67775

Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases but they are smaller in size due to certain deletions. Despite any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different en

>KOG4742 consensus Predicted chitinase [General function prediction only]

Probab=100.00  E-value=1e-34  Score=228.68  Aligned_cols=97  Identities=52%  Similarity=1.014  Sum_probs=93.8

Q ss_pred             CCCHHHHhhhcCCCCCCCCCCCCcCCHHHHHHHHhcCCCCCCCCChHHHHHHHHHHHHhhhcccCCCccCCCCCCceeee
Q 045378            1 IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGY   80 (99)
Q Consensus         1 ivt~~~F~~lfp~rn~~~c~~~gfYTY~~fi~Aa~~fp~F~~tG~~~~~krElAAFfAh~shET~gg~~~a~~g~~~wgl   80 (99)
                      +||+++||+||+++|.+.|++++||||++||.|+++||+|+++|+..+.||||||||||++|||+|||..+++|+++|||
T Consensus        65 ~~T~~~F~~i~~~~~~g~c~~~gfyty~aFi~Aa~sfp~fg~t~~~~~~kreiAaf~ah~~~ETs~g~~~~~~G~~~~~f  144 (286)
T KOG4742|consen   65 SVTPELFEDIFSKVGSGWCPAKGFYTYDAFIIAARSFPEFGGTGNKNTAKREIAAFFAHVTHETSGGSNCAPRGPFYWGF  144 (286)
T ss_pred             cccHHHHHHHhccccCCCCCCCCCccccHHHHHHHhcccccccCcccccchhhhhhhhhheecccCcccccCCCccccCc
Confidence            68999999999999998899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEeecCCCCCCCCCCC
Q 045378           81 CYIRQVSPASSDYCYPY   97 (99)
Q Consensus        81 c~~~E~~~~~~~YC~~s   97 (99)
                      ||++|+++.+..|||.|
T Consensus       145 c~~~e~s~~~~~YC~~s  161 (286)
T KOG4742|consen  145 CYKEEISPSSGRYCDAS  161 (286)
T ss_pred             ccccccChhhhccCCcc
Confidence            99999998448999976

>COG3179 Predicted chitinase [General function prediction only]

Probab=94.67  E-value=0.032  Score=42.95  Aligned_cols=52  Identities=27%  Similarity=0.321  Sum_probs=35.7

Q ss_pred             CCCHHHHhhhcCCCCCCCCCCCCcCCHHHHHHHHh-cCCCCCCCCChHHHHHHHHHHHHhhhcccCC
Q 045378            1 IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQ-AFPGFGNSGNETMRKREIAAFFAQTGHETTG   66 (99)
Q Consensus         1 ivt~~~F~~lfp~rn~~~c~~~gfYTY~~fi~Aa~-~fp~F~~tG~~~~~krElAAFfAh~shET~g   66 (99)
                      .||+.+|.+|+|+.-.         -.-.++.|+. ....|+-     +.+-.+|.||||+.|||+|
T Consensus         3 ~i~e~~~~ki~p~a~k---------~~~~v~~al~~~l~~~gi-----~~p~r~AmFlAQ~~HESgg   55 (206)
T COG3179           3 TITEVDLRKIFPKARK---------EFVDVIVALQPALDEAGI-----TTPLRQAMFLAQVMHESGG   55 (206)
T ss_pred             chhHHHHHHhcchhhh---------hhHHHHHHHHHHHHHhcC-----CCHHHHHHHHHHHhhhcCC
Confidence            3789999999987643         2233444444 2344442     3477899999999999983

>cd00442 lysozyme_like lysozyme_like domain

Probab=80.21  E-value=0.79  Score=30.38  Aligned_cols=20  Identities=15%  Similarity=-0.172  Sum_probs=17.0

Q ss_pred             HHHHHhhhcccCCCccCCCC
Q 045378           54 AAFFAQTGHETTGGWTDAPG   73 (99)
Q Consensus        54 AAFfAh~shET~gg~~~a~~   73 (99)
                      |+|+++++||+.+++...++
T Consensus         1 a~~~~i~~~E~~~~~~~~~~   20 (105)
T cd00442           1 AIIDMLASSEGTDLKAYKDR   20 (105)
T ss_pred             ChhhhhhhcccCCCcccccC
Confidence            67999999999999877654

This contains several members including Soluble Lytic Transglycosylases (SLT), Goose Egg-White Lysozymes (GEWL), Hen Egg-White Lysozymes (HEWL), chitinases, bacteriophage lambda lysozymes, endolysins, autolysins, and chitosanases. All the members are involved in the hydrolysis of beta-1,4- linked polysaccharides.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	99
3cql_A	243	Crystal Structure Of Gh Family 19 Chitinase From Ca		7e-32
4dwx_A	244	Crystal Structure Of A Family Gh-19 Chitinase From		4e-29
2z37_A	244	Crystal Structure Of Brassica Juncea Chitinase Cata		6e-27
2z38_A	247	Crystal Structure Of Chloride Bound Brassica Juncea		7e-27
2z39_A	246	Crystal Structure Of Brassica Juncea Chitinase Cata		1e-26
2baa_A	243	The Refined Crystal Structure Of An Endochitinase F		7e-26
1cns_A	243	Crystal Structure Of Chitinase At 1.91a Resolution		2e-25
1dxj_A	242	Structure Of The Chitinase From Jack Bean Length =		4e-25
2dkv_A	309	Crystal Structure Of Class I Chitinase From Oryza S		3e-24
3w3e_A	242	Structure Of Vigna Unguiculata Chitinase With Regul		4e-24
3hbd_A	204	Class Iv Chitinase Structure From Picea Abies At 1.		1e-12
2cjl_A	204	Crystal Structure And Enzymatic Properties Of A Bac		2e-10
1wvu_A	265	Crystal Structure Of Chitinase C From Streptomyces		2e-08
1wvv_A	265	Crystal Structure Of Chitinase C Mutant E147q Lengt		3e-08

>pdb|3CQL|A Chain A, Crystal Structure Of Gh Family 19 Chitinase From Carica Papaya Length = 243

Iteration: 1
 Score =  132 bits (331), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 60/96 (62%), Positives = 76/96 (79%), Gaps = 1/96 (1%)
Query: 1  IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
          IISR MF+ +L +RN+  CPA+GFYTYDAFI AA++FP FG +G+  +RKREIAAF  QT
Sbjct: 5  IISRSMFDQMLKHRNNPACPAKGFYTYDAFIAAAKSFPSFGTTGSTDVRKREIAAFLGQT 64
Query: 61 GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYP 96
           HETTGGW  AP G YAWGYC++++ +P SS+YC P
Sbjct: 65 SHETTGGWPSAPDGPYAWGYCFLKERNP-SSNYCAP 99

>pdb|4DWX|A Chain A, Crystal Structure Of A Family Gh-19 Chitinase From Rye Seeds Length = 244

Iteration: 1
 Score =  122 bits (306), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 57/96 (59%), Positives = 71/96 (73%), Gaps = 1/96 (1%)
Query: 1   IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
           IIS   F+ +L +RND  C A+GFYTYDAF+ AA AFPGFG +G+   RKR++AAF AQT
Sbjct: 6   IISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQT 65
Query: 61  GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYP 96
            HETTGGW  AP G +AWGYC+ +Q   A++DYC P
Sbjct: 66  SHETTGGWATAPDGAFAWGYCF-KQERGAAADYCTP 100

>pdb|2Z37|A Chain A, Crystal Structure Of Brassica Juncea Chitinase Catalytic Module (Bjchi3) Length = 244

Iteration: 1
 Score =  115 bits (288), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 55/98 (56%), Positives = 68/98 (69%), Gaps = 5/98 (5%)
Query: 1  IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
          IISR+ F  +L + ND  C A GF+TYDAFI AA++FP FGN+G+  MRK+EIAAFF QT
Sbjct: 5  IISRDQFYKMLKHMNDNDCHAVGFFTYDAFITAAKSFPSFGNTGDLAMRKKEIAAFFGQT 64
Query: 61 GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYPYC 98
           HETTGGW+ AP G   WGYCY  ++     D   P+C
Sbjct: 65 SHETTGGWSGAPDGANTWGYCYKEEI-----DKSDPHC 97

>pdb|2Z38|A Chain A, Crystal Structure Of Chloride Bound Brassica Juncea Chitinase Catalytic Module (Bjchi3) Length = 247

Iteration: 1
 Score =  115 bits (288), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 55/98 (56%), Positives = 68/98 (69%), Gaps = 5/98 (5%)
Query: 1   IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
           IISR+ F  +L + ND  C A GF+TYDAFI AA++FP FGN+G+  MRK+EIAAFF QT
Sbjct: 8   IISRDQFYKMLKHMNDNDCHAVGFFTYDAFITAAKSFPSFGNTGDLAMRKKEIAAFFGQT 67
Query: 61  GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYPYC 98
            HETTGGW+ AP G   WGYCY  ++     D   P+C
Sbjct: 68  SHETTGGWSGAPDGANTWGYCYKEEI-----DKSDPHC 100

>pdb|2Z39|A Chain A, Crystal Structure Of Brassica Juncea Chitinase Catalytic Module Glu234ala Mutant (bjchi3-e234a) Length = 246

Iteration: 1
 Score =  114 bits (285), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 55/98 (56%), Positives = 67/98 (68%), Gaps = 5/98 (5%)
Query: 1  IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
          IISR+ F  +L + ND  C A GF+TYDAFI AA++FP FGN+G+  MRK+EIAAFF QT
Sbjct: 7  IISRDQFYKMLKHMNDNDCHAVGFFTYDAFITAAKSFPSFGNTGDLAMRKKEIAAFFGQT 66
Query: 61 GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYPYC 98
           HETTGGW+ AP G   WGYCY   +     D   P+C
Sbjct: 67 SHETTGGWSGAPDGANTWGYCYKEAI-----DKSDPHC 99

>pdb|2BAA|A Chain A, The Refined Crystal Structure Of An Endochitinase From Hordeum Vulgare L. Seeds To 1.8 Angstroms Resolution Length = 243

Iteration: 1
 Score =  112 bits (279), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 59/96 (61%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Query: 1  IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
          I+SR  F+ +L +RND  C A+GFYTYDAF+ AA AFPGFG +G+   +KRE+AAF AQT
Sbjct: 5  IVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQT 64
Query: 61 GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYP 96
           HETTGGW  AP G +AWGYC+ +Q   ASSDYC P
Sbjct: 65 SHETTGGWATAPDGAFAWGYCF-KQERGASSDYCTP 99

>pdb|1CNS|A Chain A, Crystal Structure Of Chitinase At 1.91a Resolution Length = 243

Iteration: 1
 Score =  110 bits (275), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/96 (60%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Query: 1  IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
          I+SR  F+ +L +RND  C A+GFYTYDAF+ AA AF GFG +G+  ++KRE+AAF AQT
Sbjct: 5  IVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFSGFGTTGSADVQKREVAAFLAQT 64
Query: 61 GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYP 96
           HETTGGW  AP G +AWGYC+ +Q   ASSDYC P
Sbjct: 65 SHETTGGWATAPDGAFAWGYCF-KQERGASSDYCTP 99

>pdb|1DXJ|A Chain A, Structure Of The Chitinase From Jack Bean Length = 242

Iteration: 1
 Score =  109 bits (272), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 50/99 (50%), Positives = 68/99 (68%), Gaps = 1/99 (1%)
Query: 1   IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
           +I   +F+ LL +RND  C  +GFY+Y+AF+ AA++F GFG +G+   RKRE+AAF AQT
Sbjct: 5   VIDASLFDQLLKHRNDPACEGKGFYSYNAFVTAARSFGGFGTTGDTNTRKREVAAFLAQT 64
Query: 61  GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYPYCP 99
            HETTGG   +P G YAWGYC++ +    S+ YC P  P
Sbjct: 65  SHETTGGAAGSPDGPYAWGYCFVTERD-KSNKYCDPGTP 102

>pdb|2DKV|A Chain A, Crystal Structure Of Class I Chitinase From Oryza Sativa L. Japonica Length = 309

Iteration: 1
 Score =  106 bits (265), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/96 (60%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Query: 1   IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
           I+ R++FE LL +RND  CPARGFYTY+AF+ AA AFP FG +GN   RKRE+AAF  QT
Sbjct: 61  IVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFLGQT 120
Query: 61  GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYP 96
            HETTGGW  AP G ++WGYC+ ++ +P  SDYC P
Sbjct: 121 SHETTGGWPTAPDGPFSWGYCFKQEQNPP-SDYCQP 155

>pdb|3W3E|A Chain A, Structure Of Vigna Unguiculata Chitinase With Regulation Activity Of The Plant Cell Wall Length = 242

Iteration: 1
 Score =  106 bits (264), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 48/94 (51%), Positives = 65/94 (69%), Gaps = 1/94 (1%)
Query: 1  IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
          +I   +F+ LL +RND  C  +GFY+Y+AFI AA++F  FG +G+   RKRE+AAF AQT
Sbjct: 6  VIGASLFDQLLKHRNDQACEGKGFYSYNAFITAARSFAAFGTTGDSNTRKREVAAFLAQT 65
Query: 61 GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYC 94
           HETTGG   +P G YAWGYC++ +    S+ YC
Sbjct: 66 SHETTGGAATSPDGPYAWGYCFVTE-RDKSNRYC 98

>pdb|3HBD|A Chain A, Class Iv Chitinase Structure From Picea Abies At 1.8a Length = 204

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/88 (42%), Positives = 49/88 (55%), Gaps = 14/88 (15%)
Query: 1  IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
          IIS+  F  L      + C  +GFYTY+AFI AA A+ GFG +G+  ++KRE+AAFFA  
Sbjct: 5  IISQSFFNGLAGGA-ASSCEGKGFYTYNAFIAAANAYSGFGTTGSNDVKKRELAAFFANV 63
Query: 61 GHETTGGWTDAPGGEYAWGYCYIRQVSP 88
           HET              G CYI + +P
Sbjct: 64 MHETG-------------GLCYINEKNP 78

>pdb|2CJL|A Chain A, Crystal Structure And Enzymatic Properties Of A Bacterial Family 19 Chitinase Reveal Differences With Plant Enzymes Length = 204

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 7/66 (10%)
Query: 1  IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
          ++S   F+ + P RN        FYTY     A  A+PGF N+G++T++K+E AAF A  
Sbjct: 2  VVSEAQFDQMFPSRNS-------FYTYSGLTAALSAYPGFSNTGSDTVKKQEAAAFLANV 54
Query: 61 GHETTG 66
          GHET G
Sbjct: 55 GHETGG 60

>pdb|1WVU|A Chain A, Crystal Structure Of Chitinase C From Streptomyces Griseus Hut6037 Length = 265

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 1   IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
           ++S   F  + P RN        FYTY    +A  A+P F  +G++ ++KRE AAF A  
Sbjct: 63  VVSEAQFNQMFPNRN-------AFYTYKGLTDALSAYPAFAKTGSDEVKKREAAAFLANV 115
Query: 61  GHETTG 66
            HET G
Sbjct: 116 SHETGG 121

>pdb|1WVV|A Chain A, Crystal Structure Of Chitinase C Mutant E147q Length = 265

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 1   IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
           ++S   F  + P RN        FYTY    +A  A+P F  +G++ ++KRE AAF A  
Sbjct: 63  VVSEAQFNQMFPNRN-------AFYTYKGLTDALSAYPAFAKTGSDEVKKREAAAFLANV 115
Query: 61  GHETTG 66
            H+T G
Sbjct: 116 SHQTGG 121

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	99
2z37_A	244	Chitinase; family 19, conformational changes, hydr	5e-28
3cql_A	243	Endochitinase; glycosyl hydrolase, N-acetyl-D-gluc	1e-26
1dxj_A	242	Class II chitinase; hydrolase, family 19 glycosida	2e-26
3hbe_X	204	Class IV chitinase CHIA4-PA2; endochitinase, famil	3e-19
2cjl_A	204	Chitinase G, secreted chitinase; hydrolase, plant	4e-17
2dkv_A	309	Chitinase; whole structure, oryza sativa L. japoni	1e-13
1wvv_A	265	Chitinase C; family 19 chitinase, whole structure,	2e-09

>2z37_A Chitinase; family 19, conformational changes, hydrolase; 1.53A {Brassica juncea} PDB: 2z38_A 2z39_A Length = 244

 Score =  100 bits (250), Expect = 5e-28
 Identities = 52/94 (55%), Positives = 65/94 (69%)

Query: 1  IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
          IISR+ F  +L + ND  C A GF+TYDAFI AA++FP FGN+G+  MRK+EIAAFF QT
Sbjct: 5  IISRDQFYKMLKHMNDNDCHAVGFFTYDAFITAAKSFPSFGNTGDLAMRKKEIAAFFGQT 64

Query: 61 GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYC 94
           HETTGGW+ AP G   WGYCY  ++  +     
Sbjct: 65 SHETTGGWSGAPDGANTWGYCYKEEIDKSDPHCD 98

>3cql_A Endochitinase; glycosyl hydrolase, N-acetyl-D-glucosamine, carbo metabolism, chitin degradation, chitin-binding, glycosidase hydrolase; HET: NDG NAG; 1.50A {Carica papaya} PDB: 1cns_A 2baa_A Length = 243

 Score = 97.3 bits (241), Expect = 1e-26
 Identities = 59/97 (60%), Positives = 76/97 (78%), Gaps = 1/97 (1%)

Query: 1   IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
           IISR MF+ +L +RN+  CPA+GFYTYDAFI AA++FP FG +G+  +RKREIAAF  QT
Sbjct: 5   IISRSMFDQMLKHRNNPACPAKGFYTYDAFIAAAKSFPSFGTTGSTDVRKREIAAFLGQT 64

Query: 61  GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYPY 97
            HETTGGW  AP G YAWGYC++++ +P+ S+YC P 
Sbjct: 65  SHETTGGWPSAPDGPYAWGYCFLKERNPS-SNYCAPS 100

>1dxj_A Class II chitinase; hydrolase, family 19 glycosidase, alpha helical protein; 1.8A {Canavalia ensiformis} SCOP: d.2.1.1 Length = 242

 Score = 96.5 bits (239), Expect = 2e-26
 Identities = 50/99 (50%), Positives = 68/99 (68%), Gaps = 1/99 (1%)

Query: 1   IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
           +I   +F+ LL +RND  C  +GFY+Y+AF+ AA++F GFG +G+   RKRE+AAF AQT
Sbjct: 5   VIDASLFDQLLKHRNDPACEGKGFYSYNAFVTAARSFGGFGTTGDTNTRKREVAAFLAQT 64

Query: 61  GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYPYCP 99
            HETTGG   +P G YAWGYC++ +    S+ YC P  P
Sbjct: 65  SHETTGGAAGSPDGPYAWGYCFVTERDK-SNKYCDPGTP 102

>3hbe_X Class IV chitinase CHIA4-PA2; endochitinase, family 19, conformational changes, chitin-binding, glycosidase, hydrolase; 1.55A {Picea abies} PDB: 3hbd_A 3hbh_A Length = 204

 Score = 77.2 bits (189), Expect = 3e-19
 Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 2/95 (2%)

Query: 1  IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
          IIS+  F  L      + C  +GFYTY+AFI AA A+ GFG +G+  ++KRE+AAFFA  
Sbjct: 5  IISQSFFNGLAG-GAASSCEGKGFYTYNAFIAAANAYSGFGTTGSNDVKKRELAAFFANV 63

Query: 61 GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCY 95
           HET G             YC      P +S   Y
Sbjct: 64 MHETGGLCYINEKN-PPINYCQSSSTWPCTSGKSY 97

>2cjl_A Chitinase G, secreted chitinase; hydrolase, plant enzymes; 1.5A {Streptomyces coelicolor} Length = 204

 Score = 71.7 bits (175), Expect = 4e-17
 Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 20/95 (21%)

Query: 1  IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
          ++S   F+ + P RN        FYTY     A  A+PGF N+G++T++K+E AAF A  
Sbjct: 2  VVSEAQFDQMFPSRNS-------FYTYSGLTAALSAYPGFSNTGSDTVKKQEAAAFLANV 54

Query: 61 GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCY 95
          GHET              G  Y+ + + A+  +  
Sbjct: 55 GHET-------------GGLVYVVEQNTANYPHYC 76

>2dkv_A Chitinase; whole structure, oryza sativa L. japonica, hydrolase; HET: MES; 2.00A {Oryza sativa japonica group} PDB: 3iwr_A* Length = 309

 Score = 63.6 bits (153), Expect = 1e-13
 Identities = 57/95 (60%), Positives = 70/95 (73%), Gaps = 1/95 (1%)

Query: 3   SREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGH 62
            R++FE LL +RND  CPARGFYTY+AF+ AA AFP FG +GN   RKRE+AAF  QT H
Sbjct: 63  PRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFLGQTSH 122

Query: 63  ETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYPY 97
           ETTGGW  AP G ++WGYC+ ++ +P  SDYC P 
Sbjct: 123 ETTGGWPTAPDGPFSWGYCFKQEQNP-PSDYCQPS 156

>1wvv_A Chitinase C; family 19 chitinase, whole structure, hydrolase; 2.00A {Streptomyces griseus} PDB: 1wvu_A 2dbt_A* 2d49_A Length = 265

 Score = 51.5 bits (122), Expect = 2e-09
 Identities = 21/69 (30%), Positives = 32/69 (46%)

Query: 14  RNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPG 73
            N        FYTY    +A  A+P F  +G++ ++KRE AAF A   H+T G +     
Sbjct: 69  FNQMFPNRNAFYTYKGLTDALSAYPAFAKTGSDEVKKREAAAFLANVSHQTGGLFYIKEV 128

Query: 74  GEYAWGYCY 82
            E  + +  
Sbjct: 129 NEANYPHYC 137

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	99
3w3e_A	242	Cotyledoneous yieldin-like protein; alpha helical	100.0
3cql_A	243	Endochitinase; glycosyl hydrolase, N-acetyl-D-gluc	100.0
2z37_A	244	Chitinase; family 19, conformational changes, hydr	100.0
1dxj_A	242	Class II chitinase; hydrolase, family 19 glycosida	100.0
2dkv_A	309	Chitinase; whole structure, oryza sativa L. japoni	100.0
3hbe_X	204	Class IV chitinase CHIA4-PA2; endochitinase, famil	100.0
2cjl_A	204	Chitinase G, secreted chitinase; hydrolase, plant	99.93
1wvv_A	265	Chitinase C; family 19 chitinase, whole structure,	99.91

>3w3e_A Cotyledoneous yieldin-like protein; alpha helical protein, hydrolase, family 19 glycosidase, REG protein of the cell WALL yield threshold; 1.50A {Vigna unguiculata} PDB: 1dxj_A

Probab=100.00  E-value=2.5e-46  Score=288.04  Aligned_cols=98  Identities=49%  Similarity=1.010  Sum_probs=94.3

Q ss_pred             CCCHHHHhhhcCCCCCCCCCCCCcCCHHHHHHHHhcCCCCCCCCChHHHHHHHHHHHHhhhcccCCCccCCCCCCceeee
Q 045378            1 IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGY   80 (99)
Q Consensus         1 ivt~~~F~~lfp~rn~~~c~~~gfYTY~~fi~Aa~~fp~F~~tG~~~~~krElAAFfAh~shET~gg~~~a~~g~~~wgl   80 (99)
                      |||+++||+||||||++.||+|+||||++||+|+++||+|+++|+++++|||||||||||+|||+|||+++|+|||+|||
T Consensus         6 ivt~~~f~~~~~~rn~~~c~~~~fYty~~fi~Aa~~fp~F~~tg~~~~~krElAaFlA~~~hET~gg~~~a~~g~~~wg~   85 (242)
T 3w3e_A            6 VIGASLFDQLLKHRNDQACEGKGFYSYNAFITAARSFAAFGTTGDSNTRKREVAAFLAQTSHETTGGAATSPDGPYAWGY   85 (242)
T ss_dssp             TSCHHHHHHHTTTTTSTTSSCTTCSCHHHHHHHHHTSTTTTCSSSHHHHHHHHHHHHHHHHHHTCCCCTTSTTCGGGCTT
T ss_pred             hCCHHHHHHHhhccCCCCCCCCCcccHHHHHHHHHhhhhhcCCCCchhhHHHHHHHHhhcccccCCCcccCCCCccceEE
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEeecCCCCCCCCCCCCC
Q 045378           81 CYIRQVSPASSDYCYPYCP   99 (99)
Q Consensus        81 c~~~E~~~~~~~YC~~s~~   99 (99)
                      ||+||+++. ++||+...|
T Consensus        86 ~~~~E~~~~-~~YC~~~~P  103 (242)
T 3w3e_A           86 CFVTERDKS-NRYCDGSGP  103 (242)
T ss_dssp             CCSBCSCCS-CCCCCSSSC
T ss_pred             EEeecccCc-ccccccCCC
Confidence            999999986 899985444

>3cql_A Endochitinase; glycosyl hydrolase, N-acetyl-D-glucosamine, carbo metabolism, chitin degradation, chitin-binding, glycosidase hydrolase; HET: NDG NAG; 1.50A {Carica papaya} PDB: 1cns_A 2baa_A

Probab=100.00  E-value=6.6e-43  Score=268.69  Aligned_cols=96  Identities=61%  Similarity=1.254  Sum_probs=93.4

Q ss_pred             CCCHHHHhhhcCCCCCCCCCCCCcCCHHHHHHHHhcCCCCCCCCChHHHHHHHHHHHHhhhcccCCCccCCCCCCceeee
Q 045378            1 IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGY   80 (99)
Q Consensus         1 ivt~~~F~~lfp~rn~~~c~~~gfYTY~~fi~Aa~~fp~F~~tG~~~~~krElAAFfAh~shET~gg~~~a~~g~~~wgl   80 (99)
                      |||+++||+||||||+..||+|+||||++||+|+++||+|+++|+++++||||||||||++|||+|||.++|+|+|+|||
T Consensus         5 iit~~~F~~~~~~~~~~~c~~~~fyty~~fi~A~~~fp~f~~~g~~~~~kreiAaFlAq~~hET~gg~~~a~~g~~~wg~   84 (243)
T 3cql_A            5 IISRSMFDQMLKHRNNPACPAKGFYTYDAFIAAAKSFPSFGTTGSTDVRKREIAAFLGQTSHETTGGWPSAPDGPYAWGY   84 (243)
T ss_dssp             TSCHHHHHHHTTTTTCTTSTTTTTSCHHHHHHHHHTSTTTTCSSCHHHHHHHHHHHHHHHHHHTCCCCTTCTTCGGGCTT
T ss_pred             hcCHHHHHHHHhcccccCCCccCcccHHHHHHHHHhCchhccCCCcccCHHHHHHHHhhhheecCCCcccCCCCcccccc
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEeecCCCCCCCCCCC
Q 045378           81 CYIRQVSPASSDYCYPY   97 (99)
Q Consensus        81 c~~~E~~~~~~~YC~~s   97 (99)
                      ||+||+++. ++||+.+
T Consensus        85 ~~~~E~~~~-~~Yc~~~  100 (243)
T 3cql_A           85 CFLKERNPS-SNYCAPS  100 (243)
T ss_dssp             CCSBCSSCS-SCCCCCC
T ss_pred             eEEeeecCC-CCccCCC
Confidence            999999987 7999864

>2z37_A Chitinase; family 19, conformational changes, hydrolase; 1.53A {Brassica juncea} PDB: 2z38_A 2z39_A

Probab=100.00  E-value=1.9e-42  Score=266.13  Aligned_cols=96  Identities=55%  Similarity=1.046  Sum_probs=93.3

Q ss_pred             CCCHHHHhhhcCCCCCCCCCCCCcCCHHHHHHHHhcCCCCCCCCChHHHHHHHHHHHHhhhcccCCCccCCCCCCceeee
Q 045378            1 IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGY   80 (99)
Q Consensus         1 ivt~~~F~~lfp~rn~~~c~~~gfYTY~~fi~Aa~~fp~F~~tG~~~~~krElAAFfAh~shET~gg~~~a~~g~~~wgl   80 (99)
                      |||+++||+||||||+..||+|+||||++||+|+++||+|+++|+++++||||||||||++|||+|||.++|+|+|+|||
T Consensus         5 iit~~~f~~~~~~~~~~~c~~~~fyty~~fi~A~~~fp~f~~~g~~~~~kreiAaFlAq~~HET~gg~~~a~~g~~~wg~   84 (244)
T 2z37_A            5 IISRDQFYKMLKHMNDNDCHAVGFFTYDAFITAAKSFPSFGNTGDLAMRKKEIAAFFGQTSHETTGGWSGAPDGANTWGY   84 (244)
T ss_dssp             TSCHHHHHHHTTTTTSTTSSSTTTSCHHHHHHHHTTSTTTTTSSSHHHHHHHHHHHHHHHHHHTCCCCTTSTTCGGGCTT
T ss_pred             hCCHHHHHHHHhccCccCCcccCcCcHHHHHHHHHHhhhhccCCCccccHHHHHHHHhhheeecCCccccCCCCcccccc
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEeecCCCCCCCCCCC
Q 045378           81 CYIRQVSPASSDYCYPY   97 (99)
Q Consensus        81 c~~~E~~~~~~~YC~~s   97 (99)
                      ||++|+++. +.||+.+
T Consensus        85 ~~~~E~~~~-~~Yc~~~  100 (244)
T 2z37_A           85 CYKEEIDKS-DPHCDSN  100 (244)
T ss_dssp             CCSBCSCCC-CCCCCTT
T ss_pred             eEeeeecCC-cCCcCcC
Confidence            999999987 7899864

>1dxj_A Class II chitinase; hydrolase, family 19 glycosidase, alpha helical protein; 1.8A {Canavalia ensiformis} SCOP: d.2.1.1

Probab=100.00  E-value=3.7e-42  Score=264.27  Aligned_cols=96  Identities=50%  Similarity=1.052  Sum_probs=93.3

Q ss_pred             CCCHHHHhhhcCCCCCCCCCCCCcCCHHHHHHHHhcCCCCCCCCChHHHHHHHHHHHHhhhcccCCCccCCCCCCceeee
Q 045378            1 IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGY   80 (99)
Q Consensus         1 ivt~~~F~~lfp~rn~~~c~~~gfYTY~~fi~Aa~~fp~F~~tG~~~~~krElAAFfAh~shET~gg~~~a~~g~~~wgl   80 (99)
                      |||+++||+||||||++.||+|+||||++||+|+++||+|+++|+++++||||||||||++|||+|||.++|+|+|+|||
T Consensus         5 ~it~~~F~~~~~~~~~~~c~~~~fyty~~fi~A~~~fp~f~~~g~~~~~kreiAaFlAq~~hET~gg~~~~~~~~y~wG~   84 (242)
T 1dxj_A            5 VIDASLFDQLLKHRNDPACEGKGFYSYNAFVTAARSFGGFGTTGDTNTRKREVAAFLAQTSHETTGGAAGSPDGPYAWGY   84 (242)
T ss_dssp             TSCHHHHHHHTTTTTCTTSSCSSCSCHHHHHHHHTTSTTTTTSSSHHHHHHHHHHHHHHHHHHTCCCCTTCTTCGGGCTT
T ss_pred             hcCHHHHHHHHhccCccCCCccCcccHHHHHHHHHhCchhccCCCcccCHHHHHHHHhhhheecCCCcccCCCCcccccc
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEeecCCCCCCCCCCC
Q 045378           81 CYIRQVSPASSDYCYPY   97 (99)
Q Consensus        81 c~~~E~~~~~~~YC~~s   97 (99)
                      ||++|+++. .+||+.+
T Consensus        85 ~~~~E~~~~-~~Yc~~~  100 (242)
T 1dxj_A           85 CFVTERDKS-NKYCDPG  100 (242)
T ss_dssp             CCSBCSCCC-CCCCCTT
T ss_pred             eeeeccCCC-cccCcCC
Confidence            999999987 7999864

>2dkv_A Chitinase; whole structure, oryza sativa L. japonica, hydrolase; HET: MES; 2.00A {Oryza sativa japonica group} PDB: 3iwr_A*

Probab=100.00  E-value=1.6e-39  Score=256.94  Aligned_cols=96  Identities=60%  Similarity=1.221  Sum_probs=93.3

Q ss_pred             CCCHHHHhhhcCCCCCCCCCCCCcCCHHHHHHHHhcCCCCCCCCChHHHHHHHHHHHHhhhcccCCCccCCCCCCceeee
Q 045378            1 IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGY   80 (99)
Q Consensus         1 ivt~~~F~~lfp~rn~~~c~~~gfYTY~~fi~Aa~~fp~F~~tG~~~~~krElAAFfAh~shET~gg~~~a~~g~~~wgl   80 (99)
                      |||+++||+||||||+..||+|+||||++||+|+++||+|+++|+++++||||||||||++|||+|||.++|+++|+|||
T Consensus        61 iit~~~f~~~~~~rn~~~c~~~~fyty~~fi~Aa~~fp~F~~tG~~~~~krelAaFLAq~~HETggg~~~~~~~~y~wG~  140 (309)
T 2dkv_A           61 IVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGY  140 (309)
T ss_dssp             TSCHHHHHHHTTTTTCTTCTTTTCSCHHHHHHHHHTCTTTTCSSSHHHHHHHHHHHHHHHHHHHCCCCTTCTTCGGGCTT
T ss_pred             hccHHHHHHHhhcccccCCCcCCcccHHHHHHHHHhhhhhcccCCccccHHHHHHHHhhcchhcCCCcccCCCccccccc
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEeecCCCCCCCCCCC
Q 045378           81 CYIRQVSPASSDYCYPY   97 (99)
Q Consensus        81 c~~~E~~~~~~~YC~~s   97 (99)
                      ||++|+++. ++||+.+
T Consensus       141 ~~~~E~~~~-~~Yc~~~  156 (309)
T 2dkv_A          141 CFKQEQNPP-SDYCQPS  156 (309)
T ss_dssp             CCSBCSSCS-CCCCCCC
T ss_pred             eeeeeecCC-CCCcCCC
Confidence            999999987 7999864

>3hbe_X Class IV chitinase CHIA4-PA2; endochitinase, family 19, conformational changes, chitin-binding, glycosidase, hydrolase; 1.55A {Picea abies} SCOP: d.2.1.0 PDB: 3hbd_A 3hbh_A

Probab=100.00  E-value=7.8e-36  Score=224.80  Aligned_cols=82  Identities=48%  Similarity=0.925  Sum_probs=77.9

Q ss_pred             CCCHHHHhhhcCCCCCCCCCCCCcCCHHHHHHHHhcCCCCCCCCChHHHHHHHHHHHHhhhcccCCCccCCCCCCceeee
Q 045378            1 IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGY   80 (99)
Q Consensus         1 ivt~~~F~~lfp~rn~~~c~~~gfYTY~~fi~Aa~~fp~F~~tG~~~~~krElAAFfAh~shET~gg~~~a~~g~~~wgl   80 (99)
                      |||+++||+||||| ++.||+|+||||++||+|+++||+|+++|+++++||||||||||++|||+             ||
T Consensus         5 ivt~~~f~~~~~~~-~~~c~~~~fYty~~fi~Aa~~fp~F~~~g~~~~~kreiAaFlAq~~hETg-------------g~   70 (204)
T 3hbe_X            5 IISQSFFNGLAGGA-ASSCEGKGFYTYNAFIAAANAYSGFGTTGSNDVKKRELAAFFANVMHETG-------------GL   70 (204)
T ss_dssp             HSCHHHHHHHHHTS-CTTCTTTTTSCHHHHHHHHHTSTTTTTSSSHHHHHHHHHHHHHHHHHHHT-------------TT
T ss_pred             hCCHHHHHHHHcCC-CCCCCCCCcccHHHHHHHHHhcchhcCCCCccccHHHHHHHHhhccccCC-------------Cc
Confidence            69999999999999 56899999999999999999999999999999999999999999999998             79


Q ss_pred             eEEeecCCCCCCCCCCC
Q 045378           81 CYIRQVSPASSDYCYPY   97 (99)
Q Consensus        81 c~~~E~~~~~~~YC~~s   97 (99)
                      ||+||+++. ++|||.+
T Consensus        71 ~~~~E~~~~-~~Ycd~~   86 (204)
T 3hbe_X           71 CYINEKNPP-INYCQSS   86 (204)
T ss_dssp             TCSBCSSCS-SCCCCCC
T ss_pred             EEEEeccCC-CCccCCC
Confidence            999999977 6999864

>2cjl_A Chitinase G, secreted chitinase; hydrolase, plant enzymes; 1.5A {Streptomyces coelicolor}

Probab=99.93  E-value=1.8e-26  Score=172.27  Aligned_cols=77  Identities=42%  Similarity=0.836  Sum_probs=71.6

Q ss_pred             CCCHHHHhhhcCCCCCCCCCCCCcCCHHHHHHHHhcCCCCCCCCChHHHHHHHHHHHHhhhcccCCCccCCCCCCceeee
Q 045378            1 IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGY   80 (99)
Q Consensus         1 ivt~~~F~~lfp~rn~~~c~~~gfYTY~~fi~Aa~~fp~F~~tG~~~~~krElAAFfAh~shET~gg~~~a~~g~~~wgl   80 (99)
                      |||+++|++|||+|+.       ||||++|++|+++||+|+++|++.++||||||||||++|||+             ||
T Consensus         2 ~it~~~f~~i~~~~~~-------fyt~~~~~~A~~~y~~f~~~g~~~~~~~e~AaFlAq~~hETg-------------g~   61 (204)
T 2cjl_A            2 VVSEAQFDQMFPSRNS-------FYTYSGLTAALSAYPGFSNTGSDTVKKQEAAAFLANVGHETG-------------GL   61 (204)
T ss_dssp             CSCHHHHHHHCTTCCT-------TSCHHHHHHHGGGCTTTTCSSCHHHHHHHHHHHHHHHHHHHT-------------TT
T ss_pred             cCCHHHHHHHhccCCc-------cccHHHHHHHHHHhhhhccCCCCcCCHHHHHHHHhHHHHHcC-------------CC
Confidence            7999999999999985       999999999999999999999999999999999999999997             79


Q ss_pred             eEEeecCCC-CCCCCCCC
Q 045378           81 CYIRQVSPA-SSDYCYPY   97 (99)
Q Consensus        81 c~~~E~~~~-~~~YC~~s   97 (99)
                      ||++|+++. +.+||+.+
T Consensus        62 ~~~~E~~~~~y~~~c~~~   79 (204)
T 2cjl_A           62 VYVVEQNTANYPHYCDAS   79 (204)
T ss_dssp             TCSBCSCGGGGGGGCCTT
T ss_pred             cceeecCCCcCccccCCC
Confidence            999999865 35899864

>1wvv_A Chitinase C; family 19 chitinase, whole structure, hydrolase; 2.00A {Streptomyces griseus} PDB: 1wvu_A 2dbt_A* 2d49_A

Probab=99.91  E-value=1.9e-25  Score=172.48  Aligned_cols=77  Identities=39%  Similarity=0.805  Sum_probs=71.5

Q ss_pred             CCCHHHHhhhcCCCCCCCCCCCCcCCHHHHHHHHhcCCCCCCCCChHHHHHHHHHHHHhhhcccCCCccCCCCCCceeee
Q 045378            1 IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGY   80 (99)
Q Consensus         1 ivt~~~F~~lfp~rn~~~c~~~gfYTY~~fi~Aa~~fp~F~~tG~~~~~krElAAFfAh~shET~gg~~~a~~g~~~wgl   80 (99)
                      |||+++|++|||+|+.       ||||++|++|+++||+|+++|++.++||||||||||++|||+             ||
T Consensus        63 ~it~~~f~~i~~~~~~-------fyty~~~~~A~~~f~~f~~~g~~~~~~~e~AaFlAq~~hETg-------------g~  122 (265)
T 1wvv_A           63 VVSEAQFNQMFPNRNA-------FYTYKGLTDALSAYPAFAKTGSDEVKKREAAAFLANVSHQTG-------------GL  122 (265)
T ss_dssp             SSCHHHHHHHCTTCCT-------TCCHHHHHHHGGGSTTTTCSSSHHHHHHHHHHHHHHHHHHHT-------------TT
T ss_pred             eecHHHHHHHhccccc-------cccHHHHHHHHHhcccccccCCcccCHHHHHHHHhHHhHhhc-------------cc
Confidence            7999999999999985       999999999999999999999999999999999999999997             79


Q ss_pred             eEEeecCCC-CCCCCCCC
Q 045378           81 CYIRQVSPA-SSDYCYPY   97 (99)
Q Consensus        81 c~~~E~~~~-~~~YC~~s   97 (99)
                      ||++|+++. +..||+.+
T Consensus       123 ~~~~E~~~~~y~~~c~~~  140 (265)
T 1wvv_A          123 FYIKEVNEANYPHYCDTT  140 (265)
T ss_dssp             TCSBCSCGGGGGGGCCTT
T ss_pred             eeeEecCCCCCccccccC
Confidence            999999865 34799864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	99
d1dxja_	242	d.2.1.1 (A:) Plant class II chitinase {Jack bean (	9e-41
d2baaa_	243	d.2.1.1 (A:) Plant class II chitinase {Barley (Hor	1e-37

>d1dxja_ d.2.1.1 (A:) Plant class II chitinase {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Length = 242

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: Family 19 glycosidase
domain: Plant class II chitinase
species: Jack bean (Canavalia ensiformis) [TaxId: 3823]

 Score =  132 bits (333), Expect = 9e-41
 Identities = 49/99 (49%), Positives = 68/99 (68%), Gaps = 1/99 (1%)

Query: 1   IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
           +I   +F+ LL +RND  C  +GFY+Y+AF+ AA++F GFG +G+   RKRE+AAF AQT
Sbjct: 5   VIDASLFDQLLKHRNDPACEGKGFYSYNAFVTAARSFGGFGTTGDTNTRKREVAAFLAQT 64

Query: 61  GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYPYCP 99
            HETTGG   +P G YAWGYC++ +   + + YC P  P
Sbjct: 65  SHETTGGAAGSPDGPYAWGYCFVTERDKS-NKYCDPGTP 102

>d2baaa_ d.2.1.1 (A:) Plant class II chitinase {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 243

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: Family 19 glycosidase
domain: Plant class II chitinase
species: Barley (Hordeum vulgare) [TaxId: 4513]

 Score =  124 bits (312), Expect = 1e-37
 Identities = 57/97 (58%), Positives = 71/97 (73%), Gaps = 1/97 (1%)

Query: 1   IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQT 60
           I+SR  F+ +L +RND  C A+GFYTYDAF+ AA AFPGFG +G+   +KRE+AAF AQT
Sbjct: 5   IVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQT 64

Query: 61  GHETTGGWTDAPGGEYAWGYCYIRQVSPASSDYCYPY 97
            HETTGGW  AP G +AWGYC+ ++    SSDYC P 
Sbjct: 65  SHETTGGWATAPDGAFAWGYCFKQERGA-SSDYCTPS 100

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	99
d2baaa_	243	Plant class II chitinase {Barley (Hordeum vulgare)	100.0
d1dxja_	242	Plant class II chitinase {Jack bean (Canavalia ens	100.0

>d2baaa_ d.2.1.1 (A:) Plant class II chitinase {Barley (Hordeum vulgare) [TaxId: 4513]}

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: Family 19 glycosidase
domain: Plant class II chitinase
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=100.00  E-value=1.4e-40  Score=253.60  Aligned_cols=96  Identities=58%  Similarity=1.160  Sum_probs=93.5

Q ss_pred             CCCHHHHhhhcCCCCCCCCCCCCcCCHHHHHHHHhcCCCCCCCCChHHHHHHHHHHHHhhhcccCCCccCCCCCCceeee
Q 045378            1 IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGY   80 (99)
Q Consensus         1 ivt~~~F~~lfp~rn~~~c~~~gfYTY~~fi~Aa~~fp~F~~tG~~~~~krElAAFfAh~shET~gg~~~a~~g~~~wgl   80 (99)
                      |||+++||+||||||++.||+|+||||++||+|+++||+|+++|+++++||||||||||++|||+|+|..+++++|+|||
T Consensus         5 iit~~~F~~~fp~r~~~~c~~~~fYty~~fi~Aa~~fp~F~~tg~~~~~krElAaFlAq~~hET~g~~~~~e~~~~~~g~   84 (243)
T d2baaa_           5 IVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHETTGGWATAPDGAFAWGY   84 (243)
T ss_dssp             TSCHHHHHHHTTTTTSTTSTTTTTCCHHHHHHHHTTSTTTTCSSCHHHHHHHHHHHHHHHHHHTCCCCTTCTTCGGGCTT
T ss_pred             hcCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHhchhhcCCCchhhhHHHHHHhhcCcccccCCCcccCCCCchhhcc
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEeecCCCCCCCCCCC
Q 045378           81 CYIRQVSPASSDYCYPY   97 (99)
Q Consensus        81 c~~~E~~~~~~~YC~~s   97 (99)
                      |+++|+++. ..||+.+
T Consensus        85 ~~~~e~~~~-~~yc~~~  100 (243)
T d2baaa_          85 CFKQERGAS-SDYCTPS  100 (243)
T ss_dssp             CCSBCCSCC-CCCCCCC
T ss_pred             cchhccCCc-cccccCC
Confidence            999999987 8999764

>d1dxja_ d.2.1.1 (A:) Plant class II chitinase {Jack bean (Canavalia ensiformis) [TaxId: 3823]}

class: Alpha and beta proteins (a+b)
fold: Lysozyme-like
superfamily: Lysozyme-like
family: Family 19 glycosidase
domain: Plant class II chitinase
species: Jack bean (Canavalia ensiformis) [TaxId: 3823]

Probab=100.00  E-value=6.2e-40  Score=249.68  Aligned_cols=98  Identities=50%  Similarity=1.054  Sum_probs=95.4

Q ss_pred             CCCHHHHhhhcCCCCCCCCCCCCcCCHHHHHHHHhcCCCCCCCCChHHHHHHHHHHHHhhhcccCCCccCCCCCCceeee
Q 045378            1 IISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGY   80 (99)
Q Consensus         1 ivt~~~F~~lfp~rn~~~c~~~gfYTY~~fi~Aa~~fp~F~~tG~~~~~krElAAFfAh~shET~gg~~~a~~g~~~wgl   80 (99)
                      |||+++||+||||||++.||+++||||++||+|+++||+|+++|+++++||||||||||++|||+|+|...++++|+|||
T Consensus         5 iit~~~F~~~fp~r~~~~c~~~~fytY~~fi~Aa~~fp~F~~~g~~~~~krelAAFlAq~~hET~g~~~~~e~~~~~~g~   84 (242)
T d1dxja_           5 VIDASLFDQLLKHRNDPACEGKGFYSYNAFVTAARSFGGFGTTGDTNTRKREVAAFLAQTSHETTGGAAGSPDGPYAWGY   84 (242)
T ss_dssp             TSCHHHHHHHTTTTTCTTSSCSSCSCHHHHHHHHTTSTTTTTSSSHHHHHHHHHHHHHHHHHHTCCCCTTCTTCGGGCTT
T ss_pred             hcCHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHhcchhccCCCchhhHHHHHHHHhcccccCCCCcccCCCCccccCc
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEeecCCCCCCCCCCCCC
Q 045378           81 CYIRQVSPASSDYCYPYCP   99 (99)
Q Consensus        81 c~~~E~~~~~~~YC~~s~~   99 (99)
                      ||++|+++. .+||+.++|
T Consensus        85 ~~~~~~~~~-~~~~~~~~p  102 (242)
T d1dxja_          85 CFVTERDKS-NKYCDPGTP  102 (242)
T ss_dssp             CCSBCSCCC-CCCCCTTSC
T ss_pred             ceeeccccc-cccccCCCC
Confidence            999999987 899988765